Query 036756
Match_columns 321
No_of_seqs 216 out of 1323
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 05:11:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036756.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036756hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 8.7E-54 1.9E-58 402.7 34.9 316 1-316 119-477 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 5.8E-53 1.3E-57 394.7 36.1 314 1-315 69-423 (437)
3 COG1473 AbgB Metal-dependent a 100.0 5.9E-52 1.3E-56 376.8 33.2 310 1-315 34-391 (392)
4 TIGR01891 amidohydrolases amid 100.0 3E-44 6.4E-49 330.5 31.8 295 1-299 21-361 (363)
5 PRK08588 succinyl-diaminopimel 100.0 8.2E-44 1.8E-48 329.4 29.5 292 1-314 24-377 (377)
6 PRK06915 acetylornithine deace 100.0 7.2E-43 1.6E-47 327.6 27.7 296 1-316 39-421 (422)
7 PRK13013 succinyl-diaminopimel 100.0 3.9E-42 8.4E-47 323.2 28.0 295 1-315 39-424 (427)
8 PRK13009 succinyl-diaminopimel 100.0 1.2E-41 2.7E-46 314.7 29.5 296 1-314 24-375 (375)
9 PRK07338 hypothetical protein; 100.0 1.9E-41 4.2E-46 316.1 27.5 290 1-314 42-399 (402)
10 PRK13983 diaminopimelate amino 100.0 1.7E-41 3.8E-46 316.3 27.0 294 2-311 33-399 (400)
11 PRK06133 glutamate carboxypept 100.0 2.4E-41 5.2E-46 315.6 27.6 297 1-316 62-410 (410)
12 TIGR01246 dapE_proteo succinyl 100.0 3.8E-41 8.3E-46 310.8 27.5 294 1-312 21-370 (370)
13 PRK07473 carboxypeptidase; Pro 100.0 1.4E-40 3E-45 306.9 28.5 289 2-312 37-375 (376)
14 PRK13381 peptidase T; Provisio 100.0 2E-40 4.3E-45 309.3 27.7 290 1-313 33-403 (404)
15 PRK05469 peptidase T; Provisio 100.0 1.6E-40 3.4E-45 310.3 25.6 292 1-314 34-406 (408)
16 TIGR01882 peptidase-T peptidas 100.0 2.5E-40 5.4E-45 308.7 24.3 288 2-313 36-407 (410)
17 TIGR03320 ygeY M20/DapE family 100.0 9E-40 2E-44 304.0 26.2 295 1-314 35-395 (395)
18 TIGR01910 DapE-ArgE acetylorni 100.0 2E-40 4.3E-45 306.5 21.5 287 1-304 23-375 (375)
19 TIGR01880 Ac-peptdase-euk N-ac 100.0 1.2E-39 2.7E-44 303.6 26.9 302 1-314 33-399 (400)
20 PRK08651 succinyl-diaminopimel 100.0 1.5E-39 3.3E-44 302.6 26.3 289 1-314 31-392 (394)
21 PRK06446 hypothetical protein; 100.0 3.2E-39 7E-44 303.6 28.5 299 1-313 27-434 (436)
22 PRK13004 peptidase; Reviewed 100.0 2.3E-39 5.1E-44 301.5 26.5 296 1-315 37-398 (399)
23 TIGR01892 AcOrn-deacetyl acety 100.0 1.6E-39 3.4E-44 299.4 24.8 279 1-309 20-364 (364)
24 TIGR03526 selenium_YgeY putati 100.0 4.1E-39 9E-44 299.5 26.5 294 1-313 35-394 (395)
25 PRK05111 acetylornithine deace 100.0 3.6E-39 7.9E-44 299.0 25.9 284 1-314 34-382 (383)
26 PRK07522 acetylornithine deace 100.0 2.2E-39 4.7E-44 300.7 24.3 285 1-313 27-384 (385)
27 PRK06837 acetylornithine deace 100.0 7.1E-39 1.5E-43 300.7 26.8 292 1-315 42-424 (427)
28 PRK08652 acetylornithine deace 100.0 1.3E-38 2.7E-43 291.6 26.0 278 1-314 24-346 (347)
29 PRK08596 acetylornithine deace 100.0 5.5E-38 1.2E-42 294.1 27.5 296 1-316 38-419 (421)
30 PRK09133 hypothetical protein; 100.0 7E-38 1.5E-42 297.5 28.4 301 1-314 61-470 (472)
31 PRK12891 allantoate amidohydro 100.0 7.7E-38 1.7E-42 292.4 27.9 284 1-315 42-411 (414)
32 TIGR01883 PepT-like peptidase 100.0 7.4E-38 1.6E-42 288.0 26.1 281 1-309 22-360 (361)
33 PRK09290 allantoate amidohydro 100.0 2E-37 4.4E-42 289.7 26.6 282 1-315 39-412 (413)
34 PRK12892 allantoate amidohydro 100.0 1.8E-37 3.9E-42 290.2 26.1 282 1-314 41-411 (412)
35 PRK08262 hypothetical protein; 100.0 1.8E-37 3.8E-42 295.8 26.3 304 2-314 76-485 (486)
36 PRK04443 acetyl-lysine deacety 100.0 3.6E-37 7.8E-42 281.8 26.7 276 1-312 28-348 (348)
37 TIGR01886 dipeptidase dipeptid 100.0 1.7E-37 3.7E-42 293.5 24.9 297 2-314 48-466 (466)
38 PRK07906 hypothetical protein; 100.0 9.5E-37 2.1E-41 286.5 29.3 300 1-311 27-425 (426)
39 PRK08201 hypothetical protein; 100.0 4.6E-37 1E-41 290.8 27.2 295 1-313 42-454 (456)
40 PRK00466 acetyl-lysine deacety 100.0 6.8E-37 1.5E-41 279.9 26.1 275 1-315 32-345 (346)
41 PRK07318 dipeptidase PepV; Rev 100.0 1.3E-37 2.8E-42 295.0 21.4 296 1-314 48-466 (466)
42 COG0624 ArgE Acetylornithine d 100.0 1.5E-36 3.2E-41 283.8 27.5 300 1-314 36-408 (409)
43 PRK12893 allantoate amidohydro 100.0 9.4E-36 2E-40 278.6 29.5 282 2-314 43-410 (412)
44 PRK08737 acetylornithine deace 100.0 3.9E-36 8.5E-41 275.9 25.6 274 2-311 33-363 (364)
45 PRK12890 allantoate amidohydro 100.0 1.5E-35 3.2E-40 277.3 29.7 280 1-314 40-412 (414)
46 PRK07907 hypothetical protein; 100.0 1.3E-35 2.9E-40 280.2 27.8 295 1-313 46-447 (449)
47 PRK09104 hypothetical protein; 100.0 2.4E-35 5.2E-40 279.6 28.9 298 2-313 46-462 (464)
48 PRK07079 hypothetical protein; 100.0 3.9E-35 8.4E-40 278.4 29.3 295 4-315 49-457 (469)
49 PRK13007 succinyl-diaminopimel 100.0 1.8E-35 3.9E-40 271.3 26.0 274 1-309 29-351 (352)
50 TIGR01879 hydantase amidase, h 100.0 2.6E-35 5.5E-40 274.4 26.8 281 1-312 33-401 (401)
51 TIGR01900 dapE-gram_pos succin 100.0 3.9E-35 8.4E-40 270.5 26.0 271 1-294 18-373 (373)
52 PRK06156 hypothetical protein; 100.0 5E-35 1.1E-39 280.1 27.6 295 2-314 78-516 (520)
53 PRK07205 hypothetical protein; 100.0 3.5E-35 7.7E-40 276.9 25.6 292 2-314 44-443 (444)
54 TIGR03176 AllC allantoate amid 100.0 9.5E-35 2.1E-39 270.3 27.7 283 1-314 35-404 (406)
55 TIGR01902 dapE-lys-deAc N-acet 100.0 5.5E-34 1.2E-38 259.7 26.1 274 1-314 19-335 (336)
56 PRK13799 unknown domain/N-carb 100.0 9.4E-34 2E-38 273.9 26.4 284 1-314 216-590 (591)
57 TIGR01887 dipeptidaselike dipe 100.0 1.6E-33 3.4E-38 264.7 24.5 292 1-309 36-447 (447)
58 PRK13590 putative bifunctional 100.0 1.8E-32 3.8E-37 265.3 29.9 285 1-315 216-589 (591)
59 PRK08554 peptidase; Reviewed 100.0 4.2E-33 9E-38 261.4 24.5 297 1-313 29-437 (438)
60 TIGR01893 aa-his-dipept aminoa 100.0 6.7E-33 1.5E-37 263.4 25.9 293 1-312 26-476 (477)
61 PRK15026 aminoacyl-histidine d 100.0 3.7E-32 8.1E-37 256.8 25.8 286 1-312 32-482 (485)
62 KOG2275 Aminoacylase ACY1 and 100.0 3.2E-31 7E-36 234.5 24.0 302 1-313 50-418 (420)
63 PF01546 Peptidase_M20: Peptid 99.9 6E-23 1.3E-27 171.7 11.9 175 38-310 1-188 (189)
64 KOG2276 Metalloexopeptidases [ 99.9 4.9E-21 1.1E-25 168.6 19.5 181 1-184 44-252 (473)
65 COG2195 PepD Di- and tripeptid 99.8 7.4E-19 1.6E-23 160.5 18.5 288 2-312 28-411 (414)
66 PRK09961 exoaminopeptidase; Pr 99.6 1.3E-13 2.8E-18 125.2 18.2 229 1-312 22-333 (344)
67 PRK10199 alkaline phosphatase 99.6 3.2E-14 6.9E-19 127.2 12.1 111 1-114 57-188 (346)
68 TIGR03106 trio_M42_hydro hydro 99.5 2.1E-12 4.5E-17 117.1 19.7 218 1-309 25-339 (343)
69 TIGR03107 glu_aminopep glutamy 99.5 3.7E-12 7.9E-17 115.5 19.4 226 1-312 20-341 (350)
70 COG4187 RocB Arginine degradat 99.5 5.7E-13 1.2E-17 119.2 13.7 179 2-183 33-261 (553)
71 COG1363 FrvX Cellulase M and r 99.4 1.9E-11 4.2E-16 109.7 19.4 232 2-316 25-350 (355)
72 PRK09864 putative peptidase; P 99.4 7.9E-11 1.7E-15 106.6 20.9 228 1-312 22-341 (356)
73 PF05343 Peptidase_M42: M42 gl 98.8 6.7E-08 1.5E-12 85.8 12.7 154 69-304 135-292 (292)
74 PF04389 Peptidase_M28: Peptid 98.4 1E-06 2.2E-11 72.8 6.9 84 36-128 2-89 (179)
75 PF07687 M20_dimer: Peptidase 98.3 4.6E-07 1E-11 68.6 3.8 43 145-187 3-45 (111)
76 KOG2194 Aminopeptidases of the 98.1 6.3E-06 1.4E-10 80.9 7.6 91 22-127 128-224 (834)
77 COG2234 Iap Predicted aminopep 96.9 0.0035 7.6E-08 59.3 8.4 49 66-116 225-275 (435)
78 KOG3946 Glutaminyl cyclase [Po 96.7 0.0077 1.7E-07 52.0 7.7 102 2-114 75-200 (338)
79 KOG2195 Transferrin receptor a 96.4 0.011 2.4E-07 58.4 7.9 77 22-114 338-420 (702)
80 PF05450 Nicastrin: Nicastrin; 96.2 0.035 7.5E-07 47.8 8.7 68 35-113 1-73 (234)
81 KOG2526 Predicted aminopeptida 95.9 0.05 1.1E-06 49.9 8.5 95 22-127 193-304 (555)
82 PRK02256 putative aminopeptida 91.2 0.27 5.9E-06 46.7 4.3 81 221-310 375-460 (462)
83 PRK02813 putative aminopeptida 86.7 1.1 2.5E-05 42.1 5.0 76 226-310 346-426 (428)
84 PTZ00371 aspartyl aminopeptida 86.1 1.5 3.2E-05 41.9 5.4 80 226-314 373-457 (465)
85 cd00433 Peptidase_M17 Cytosol 77.1 30 0.00065 33.1 10.6 99 2-106 177-298 (468)
86 PTZ00412 leucyl aminopeptidase 72.6 46 0.001 32.4 10.5 99 2-106 235-357 (569)
87 COG4882 Predicted aminopeptida 72.1 16 0.00035 33.3 6.9 71 23-114 179-259 (486)
88 PF06675 DUF1177: Protein of u 69.4 17 0.00038 31.2 6.2 85 33-128 30-130 (276)
89 KOG2597 Predicted aminopeptida 66.0 37 0.0008 32.6 8.3 104 2-107 212-334 (513)
90 PRK00913 multifunctional amino 64.2 73 0.0016 30.7 10.1 100 2-106 194-312 (483)
91 PRK02256 putative aminopeptida 54.1 25 0.00054 33.6 5.1 40 62-105 252-293 (462)
92 PRK05015 aminopeptidase B; Pro 49.7 2E+02 0.0043 27.2 10.0 34 71-106 216-249 (424)
93 PF00883 Peptidase_M17: Cytoso 40.9 20 0.00043 32.3 2.1 34 70-105 109-142 (311)
94 PF04114 Gaa1: Gaa1-like, GPI 39.3 1.2E+02 0.0027 29.3 7.4 72 22-114 3-77 (504)
95 PF09940 DUF2172: Domain of un 39.1 1.2E+02 0.0025 28.2 6.7 63 30-114 125-187 (386)
96 PRK02813 putative aminopeptida 34.1 57 0.0012 30.9 4.1 36 70-110 236-275 (428)
97 COG0260 PepB Leucyl aminopepti 33.3 3.6E+02 0.0078 26.1 9.3 34 71-106 278-311 (485)
98 PTZ00371 aspartyl aminopeptida 29.4 1.4E+02 0.003 28.7 5.9 45 62-106 243-290 (465)
99 COG5482 Uncharacterized conser 24.5 1.3E+02 0.0028 24.7 4.0 38 5-44 10-47 (229)
100 KOG3566 Glycosylphosphatidylin 22.6 6.9E+02 0.015 24.7 9.0 90 3-114 92-193 (617)
101 COG1362 LAP4 Aspartyl aminopep 21.6 1.7E+02 0.0037 27.6 4.7 77 226-311 354-435 (437)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=8.7e-54 Score=402.66 Aligned_cols=316 Identities=59% Similarity=0.929 Sum_probs=262.8
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAA 80 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~ 80 (321)
+++||+++|+++||++++..+.+|++|+++++++|+|+|+|||||||+++.++|+|.++++|++||||||+++|++|+|+
T Consensus 119 t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~ 198 (478)
T PLN02280 119 TSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAA 198 (478)
T ss_pred HHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHH
Confidence 37899999999999987655678999999544458999999999999988788999888899999999999999999999
Q ss_pred HHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCC
Q 036756 81 RLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGG 160 (321)
Q Consensus 81 ~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~a 160 (321)
++|++.+.+++++|.|+|++|||++.|+++|+++|.++++|+++++|+.+.+|++.+....+..++|..+++|+++|+++
T Consensus 199 ~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~a 278 (478)
T PLN02280 199 KILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKG 278 (478)
T ss_pred HHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCceeEecccccccceeEEEEEEECcch
Confidence 99988777789999999999999988999999999887889999999877678887666667777899999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCch----------HH---------------------------------H
Q 036756 161 HAAMPHATRDPVLAASFAILALQQIVSRETDPLE----------AR---------------------------------V 197 (321)
Q Consensus 161 Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~----------~~---------------------------------~ 197 (321)
|+|.|+.|+|||..+++++.+|+++..+..+|.. ++ +
T Consensus 279 Has~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~ 358 (478)
T PLN02280 279 RAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEV 358 (478)
T ss_pred hcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999887533222110 00 2
Q ss_pred HHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccC
Q 036756 198 IEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRN 277 (321)
Q Consensus 198 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~ 277 (321)
++.++..+++++++++.......+|++.+++++++.+++++.+++|.+.+....+..+++|+++|.+.+|++++++|+++
T Consensus 359 ~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~ 438 (478)
T PLN02280 359 IVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRN 438 (478)
T ss_pred HHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecC
Confidence 33334456788777752111235788999999999999998887675533222456789999999989999999889876
Q ss_pred CCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhccc
Q 036756 278 ETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDDH 316 (321)
Q Consensus 278 ~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~~ 316 (321)
.+||....+|+++|++++++|..++++|+.++.+|+..+
T Consensus 439 ~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~~ 477 (478)
T PLN02280 439 ETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIEH 477 (478)
T ss_pred CCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 555666689999999999999999999999999998753
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=5.8e-53 Score=394.67 Aligned_cols=314 Identities=50% Similarity=0.853 Sum_probs=260.7
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAA 80 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~ 80 (321)
+++||+++|+++||+++...+++||+|+++++++|+|+|+|||||||+++.++|+|.+..+|++|+||||+++|++|+|+
T Consensus 69 ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa 148 (437)
T PLN02693 69 TSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAA 148 (437)
T ss_pred HHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHH
Confidence 37899999999999976544579999999644569999999999999988788999888889999999999999999999
Q ss_pred HHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCC
Q 036756 81 RLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGG 160 (321)
Q Consensus 81 ~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~a 160 (321)
+.|++.+..++++|.|+|++|||++.|++.|+++|.+++.|++++.|..+..+.|.+..+.|..++|..+++|+++|+++
T Consensus 149 ~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~a 228 (437)
T PLN02693 149 KILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGG 228 (437)
T ss_pred HHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccc
Confidence 99998776788999999999999667999999999876678999999887777888777778888999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchH----------H-------------------------------HHH
Q 036756 161 HAAMPHATRDPVLAASFAILALQQIVSRETDPLEA----------R-------------------------------VIE 199 (321)
Q Consensus 161 Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~----------~-------------------------------~i~ 199 (321)
|+|.|+.|+|||..+++++.+|+++..+..+|... + +++
T Consensus 229 Haa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~NvVPd~a~~~~diR~~~~~~~i~~~i~~i~~ 308 (437)
T PLN02693 229 HAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRIKEIIT 308 (437)
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCCceECCeEEEEEEEecCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999875432221100 0 333
Q ss_pred HHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCC
Q 036756 200 MQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNET 279 (321)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~ 279 (321)
.++..+++.+++++.....+.++++.+++++++++++++++++|...+....+..+++|+++|++.+|++++++|+.+..
T Consensus 309 ~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~ 388 (437)
T PLN02693 309 KQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDET 388 (437)
T ss_pred HHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCC
Confidence 44445688887776211023567788999999999999999878765433345679999999999999999999986421
Q ss_pred CCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhcc
Q 036756 280 LKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDD 315 (321)
Q Consensus 280 ~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 315 (321)
.+. ..+|+++|+++++.|..++++|+.++.+++..
T Consensus 389 ~~~-~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 389 NGY-ASSHSPLYRINEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred CCC-CCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 112 47999999999999999999999999999875
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=5.9e-52 Score=376.78 Aligned_cols=310 Identities=43% Similarity=0.675 Sum_probs=272.8
Q ss_pred ChHHHHHHHHhCCCceeccCC-CceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFA-KTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~-~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||+++|+++|+++....+ .++|+|+++++ ++|+|+|+++||++|..+.+.+||++..+|++|+||||++++++|+
T Consensus 34 Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLg 113 (392)
T COG1473 34 TAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGLPFASKNPGVMHACGHDGHTAILLG 113 (392)
T ss_pred HHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCCCcccCCCCCcccCCchHHHHHHHH
Confidence 378999999999999444333 69999999865 5689999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCC-cceEEEeccCCCCCceeEEeeccccccceeEEEEEEEe
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEK-FQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEG 157 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~-~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G 157 (321)
++++|++.+.+++|+|+|+|+|+||+++|++.|+++|.+++ +|+++++|+.|+.|.|.+.++.|....+...++++++|
T Consensus 114 aA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~G 193 (392)
T COG1473 114 AALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLPVGTVALRPGALMAAADEFEITFKG 193 (392)
T ss_pred HHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCCCceEEeecccceeecceEEEEEEe
Confidence 99999988778999999999999999888999999999988 99999999988768899989999888899999999999
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHH-----------------------------------------
Q 036756 158 KGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEAR----------------------------------------- 196 (321)
Q Consensus 158 ~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~----------------------------------------- 196 (321)
+++|++.||.++||+..++.++.+|+.+..+..+|.++.
T Consensus 194 kggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i 273 (392)
T COG1473 194 KGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIPDSAELEGTIRTFSDEVREKLEARI 273 (392)
T ss_pred CCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCCCeeEEEEEeecCCHHHHHHHHHHH
Confidence 999999999999999999999999999988777664221
Q ss_pred --HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCccee-cc-CCCcCCCcHHHHHHHhhheEEE
Q 036756 197 --VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVH-LL-PMAMGAEDFSFYSQKMAAALFM 272 (321)
Q Consensus 197 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~-~~-~~~~~~~D~~~~~~~~p~~~~~ 272 (321)
++++++..++|++++++ ...||++.||+.+.+.+++++++..+...+. .. ..+.+++||++|++.+|.++++
T Consensus 274 ~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~ 349 (392)
T COG1473 274 ERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELPPSMAGSEDFGYYLEKVPGAFFF 349 (392)
T ss_pred HHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHhccccceecccCCCCCccchHHHHHHhCCeeEEE
Confidence 56677778999999999 7889999999999999999999986644321 12 3356999999999999999999
Q ss_pred ecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhcc
Q 036756 273 IGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDD 315 (321)
Q Consensus 273 ~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 315 (321)
+|..+...+ ....|+|.+.++.+.|..+++++..++.+++..
T Consensus 350 lG~~~~~~~-~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 350 LGTGSADGG-TYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred eecCcCCCC-cccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 998653211 335999999999999999999999999998753
No 4
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=3e-44 Score=330.53 Aligned_cols=295 Identities=46% Similarity=0.730 Sum_probs=234.0
Q ss_pred ChHHHHHHHHhCCCceec-cCCCceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTW-PFAKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~-~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||.++|+++|+++++ ..+.+||+++++++ ++|+|+|+|||||||.+++..+||....+|++||||+|++++++|+
T Consensus 21 ~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~ 100 (363)
T TIGR01891 21 TSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLG 100 (363)
T ss_pred HHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHH
Confidence 478999999999999875 34568999999764 4699999999999998776678998767899999999999999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEec
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGK 158 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~ 158 (321)
|++.|++.+..++++|.|+|++|||.+.|++++++++.++++|++|++|+.+..+.+.+....+.+++|..+++++++|+
T Consensus 101 a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~~G~ 180 (363)
T TIGR01891 101 TAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGLRPGTIMAAADKFEVTIHGK 180 (363)
T ss_pred HHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEECCCcceeecceEEEEEEee
Confidence 99999876667889999999999998789999999887767899999998766677765556677788999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCC---------------------CchHH---------------------
Q 036756 159 GGHAAMPHATRDPVLAASFAILALQQIVSRETD---------------------PLEAR--------------------- 196 (321)
Q Consensus 159 ~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~---------------------p~~~~--------------------- 196 (321)
++|++.|+.|.|||..|++++.+|+++.....+ |....
T Consensus 181 ~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~ 260 (363)
T TIGR01891 181 GAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMSGTVRSLDPEVRDQIIDRIE 260 (363)
T ss_pred cccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEEEEEEeCCHHHHHHHHHHHH
Confidence 999999999999999999999999876321100 10000
Q ss_pred -HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCccee-ccCCCcCCCcHHHHHHHhhheEEEec
Q 036756 197 -VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVH-LLPMAMGAEDFSFYSQKMAAALFMIG 274 (321)
Q Consensus 197 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~-~~~~~~~~~D~~~~~~~~p~~~~~~G 274 (321)
+++..+...++++++++ ...+|+...++++++.+++++++++|...+. .+..+++++|++++++.+|++++|+|
T Consensus 261 ~~~~~~~~~~~~~ve~~~----~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~Da~~~~~~~P~~~~f~~ 336 (363)
T TIGR01891 261 RIVEGAAAMYGAKVELNY----DRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMGSEDFAYYSQKVPGAFFFLG 336 (363)
T ss_pred HHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCccccCHHHHHHhCCeeEEEEe
Confidence 22233334578888876 3345666678899999999999976744321 12357899999999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCcCCCCcHH
Q 036756 275 TRNETLKPVVRLHSPYLVIDEDVLP 299 (321)
Q Consensus 275 ~~~~~~g~~~~~H~~~E~v~~~~l~ 299 (321)
+.+.+.+....+|++++.++.+.|.
T Consensus 337 ~~~~~~~~~~~~h~~~~~~~~~~~~ 361 (363)
T TIGR01891 337 IGNEGTGLSHPLHHPRFDIDEEALA 361 (363)
T ss_pred cCCCCCCCCCCCCCCCCcCChHHhc
Confidence 7642112235899999998877654
No 5
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.2e-44 Score=329.39 Aligned_cols=292 Identities=22% Similarity=0.282 Sum_probs=225.4
Q ss_pred ChHHHHHHHHhCCCceecc---CCCceEEEEecCCCCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC---ch
Q 036756 1 AGQLVRNELASLGIEYTWP---FAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG---HD 70 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~---~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g---~k 70 (321)
+++||+++|+++||+++.. .+++|++++++++ .|+|+|+|||||||+++...| ||+. +++|++|||| ||
T Consensus 24 ~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~K 102 (377)
T PRK08588 24 VANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMK 102 (377)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCccccc
Confidence 4789999999999997643 3568999999543 489999999999998765455 8874 5789999975 68
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccccccee
Q 036756 71 VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSM 149 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~ 149 (321)
++++++|.|++.|++.+..++++|.|+|++|||++ .|++++++++.+.++|++++.+++. ..+. ..++|..
T Consensus 103 gg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~ep~~----~~i~----~~~~G~~ 174 (377)
T PRK08588 103 SGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGEPSG----HGIV----YAHKGSM 174 (377)
T ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEecCCC----ceeE----EEEEEEE
Confidence 99999999999999887778899999999999987 5999999998776789988876421 2222 2357999
Q ss_pred EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc------C-----C-------------CchH----------
Q 036756 150 RFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE------T-----D-------------PLEA---------- 195 (321)
Q Consensus 150 ~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~------~-----~-------------p~~~---------- 195 (321)
+++|+++|+++|||.|+.|.|||..+++++.+|+++..+. . + |...
T Consensus 175 ~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvip~~~~~~~d~R~~p 254 (377)
T PRK08588 175 DYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIINGGEQVNSVPDEAELEFNIRTIP 254 (377)
T ss_pred EEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEeCCCcCCcCCCeEEEEEEeccCC
Confidence 9999999999999999999999999999999998763210 0 0 1000
Q ss_pred ----H----HHHHHHH----HhCCeEEEEEeccccCCCCCccC--CHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHH
Q 036756 196 ----R----VIEMQAA----VHQCSATLDFMEEKLRPYPATVN--DEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSF 261 (321)
Q Consensus 196 ----~----~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~ 261 (321)
. .++.+.+ ..++++++++ ...++++.. ++++++.+++++++++|.++. .....+++|+++
T Consensus 255 ~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~l~~~~~~~~~~~~g~~~~--~~~~~g~tD~~~ 328 (377)
T PRK08588 255 EYDNDQVISLLQEIINEVNQNGAAQLSLDI----YSNHRPVASDKDSKLVQLAKDVAKSYVGQDIP--LSAIPGATDASS 328 (377)
T ss_pred CCCHHHHHHHHHHHHHHHhhccCCceEEEE----ecCCCCcCCCCCCHHHHHHHHHHHHhhCCCCc--eecCCCcccHHH
Confidence 0 2222222 2346677776 334555443 568999999999998786543 345678999999
Q ss_pred HHHH---hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 262 YSQK---MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 262 ~~~~---~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
|... +|++. +|++ ...++|++||++++++|.+++++|..++.++|+
T Consensus 329 ~~~~~~~ip~i~--~Gpg-----~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 329 FLKKKPDFPVII--FGPG-----NNLTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred HhhhcCCCCEEE--ECCC-----CCccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 9753 56654 4643 236799999999999999999999999999873
No 6
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=7.2e-43 Score=327.60 Aligned_cols=296 Identities=21% Similarity=0.242 Sum_probs=223.8
Q ss_pred ChHHHHHHHHhCCCceecc--------------------CCCceEEEEecCC-CCCEEEEEeccccCCCCCCCCC---Cc
Q 036756 1 AGQLVRNELASLGIEYTWP--------------------FAKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEW---EH 56 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--------------------~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~---pf 56 (321)
+++||+++|+++|++++.. .+++||++++++. ++|+|+|+|||||||+++...| ||
T Consensus 39 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf 118 (422)
T PRK06915 39 AQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPY 118 (422)
T ss_pred HHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCC
Confidence 3689999999999987531 2468999999653 4689999999999998766556 89
Q ss_pred ccc-CCCceecCC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCC
Q 036756 57 KSK-NNGKMHACG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPE 131 (321)
Q Consensus 57 ~~~-~~G~~~g~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~ 131 (321)
... ++|++|||| |||+++++|.|++.|++.+.+++++|.|+|++|||++ .|+..++..+. ++|++|+.+
T Consensus 119 ~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~e---- 192 (422)
T PRK06915 119 SGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVIEEESGGAGTLAAILRGY--KADGAIIPE---- 192 (422)
T ss_pred CceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEecccccCCcchHHHHhcCc--CCCEEEECC----
Confidence 864 689999976 6899999999999999887778899999999999977 48888888874 579999854
Q ss_pred CCceeEEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----cCC--------Cc------
Q 036756 132 LPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR----ETD--------PL------ 193 (321)
Q Consensus 132 ~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~----~~~--------p~------ 193 (321)
|++.. + ...++|..+++|+++|+++|+|.|+.|+|||..+++++.+|+++... ..+ |.
T Consensus 193 -p~~~~-i--~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~ 268 (422)
T PRK06915 193 -PTNMK-F--FPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGK 268 (422)
T ss_pred -CCCcc-c--eeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEE
Confidence 34421 1 23568999999999999999999999999999999999999876421 000 10
Q ss_pred -hHH--------------------------HHHHHH---HH--h------CCeEEEEEeccccCCCCCccCCHHHHHHHH
Q 036756 194 -EAR--------------------------VIEMQA---AV--H------QCSATLDFMEEKLRPYPATVNDEEMYEHAK 235 (321)
Q Consensus 194 -~~~--------------------------~i~~~~---~~--~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 235 (321)
.+. +.+.+. +. . ++.+++++.+..... .+..+++++++.++
T Consensus 269 i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~d~~lv~~l~ 347 (422)
T PRK06915 269 IEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGARWVP-GELEENHPLMTTLE 347 (422)
T ss_pred eeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecccCCc-ccCCCCCHHHHHHH
Confidence 000 112111 11 1 233455442100111 23456779999999
Q ss_pred HHHHhhcCCcceeccCCCcCCCcHHHHHHH--hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 236 KVGTSLLGEANVHLLPMAMGAEDFSFYSQK--MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 236 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~--~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
+++++++|..+. ...+++++|+++|... +|+++| |++ ....+|++||++++++|..++++|+.++.++|
T Consensus 348 ~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~f--Gpg-----~~~~aH~~dE~v~~~~l~~~~~~~~~ll~~~~ 418 (422)
T PRK06915 348 HNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIVF--GPG-----ETKVAHYPNEYIEVDKMIAAAKIIALTLLDWC 418 (422)
T ss_pred HHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEEE--CCC-----CccccCCCCceeEHHHHHHHHHHHHHHHHHHh
Confidence 999998787654 2456789999999974 999765 432 23579999999999999999999999999998
Q ss_pred ccc
Q 036756 314 DDH 316 (321)
Q Consensus 314 ~~~ 316 (321)
..+
T Consensus 419 ~~~ 421 (422)
T PRK06915 419 EVK 421 (422)
T ss_pred CCC
Confidence 654
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.9e-42 Score=323.24 Aligned_cols=295 Identities=15% Similarity=0.119 Sum_probs=221.2
Q ss_pred ChHHHHHHHHhCCCceeccC-----------CCceEEEEecCC-CCCEEEEEeccccCCCCC-CCCCCccc-cCCCceec
Q 036756 1 AGQLVRNELASLGIEYTWPF-----------AKTGIVASVGSG-VQPWFGLRADMDALPIQE-MVEWEHKS-KNNGKMHA 66 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~-----------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~-~~~~pf~~-~~~G~~~g 66 (321)
+++||+++|+++||+++... +++|++|+++++ ++|+|+|+|||||||+++ |+.+||+. ++||++||
T Consensus 39 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyG 118 (427)
T PRK13013 39 ICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYG 118 (427)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEe
Confidence 47899999999999976431 146999999654 468999999999999864 35669986 56899997
Q ss_pred ---CCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCCCC--CcceEEEeccCCCCCceeEEe
Q 036756 67 ---CGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGALE--KFQGIFGLHVAPELPTGTIGS 139 (321)
Q Consensus 67 ---~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~~~--~~d~~i~~~~~~~~p~g~~~~ 139 (321)
||||++++++|+|++.|++.+..++++|.|+|++|||++ +|.++|++++.+. ++|++|+.+++. ...+.
T Consensus 119 rGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~d~~i~~ep~~---~~~i~- 194 (427)
T PRK13013 119 RGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYLAEQGRFSPDRVQHVIIPEPLN---KDRIC- 194 (427)
T ss_pred ccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHHHhcCCccccCCCEEEEecCCC---CCceE-
Confidence 568999999999999999877778899999999999986 3788888887664 468999876432 11222
Q ss_pred eccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc-------------------cCC--------C
Q 036756 140 RPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR-------------------ETD--------P 192 (321)
Q Consensus 140 ~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~-------------------~~~--------p 192 (321)
..++|..+++|+++|+++|+|.|+.|+|||..++++|.+|+++..+ ..+ +
T Consensus 195 ---~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~ 271 (427)
T PRK13013 195 ---LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEP 271 (427)
T ss_pred ---EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCc
Confidence 2357999999999999999999999999999999999999764200 000 0
Q ss_pred c----------h--HH------------------H---HHHHHH----H-hCCeEEEEEeccccCCCCCccC--CHHHHH
Q 036756 193 L----------E--AR------------------V---IEMQAA----V-HQCSATLDFMEEKLRPYPATVN--DEEMYE 232 (321)
Q Consensus 193 ~----------~--~~------------------~---i~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~ 232 (321)
. . +. + ++...+ . .+++++++. ...+++... ++++++
T Consensus 272 ~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~lv~ 347 (427)
T PRK13013 272 EQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRARPGFAYEIRD----LFEVLPTMTDRDAPVVR 347 (427)
T ss_pred cccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEE----cccCCcccCCCCCHHHH
Confidence 0 0 00 1 222211 1 245555554 223455443 458999
Q ss_pred HHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH--h-hheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 233 HAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK--M-AAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 233 ~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~--~-p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
.+.+++++.+|.++. ...+++++|++++... + |++. +|+ |....+|++|||+++++|.+++++|++++
T Consensus 348 ~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v~--fGP-----g~~~~aH~~nE~v~i~~l~~~~~~l~~~l 418 (427)
T PRK13013 348 SVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCIA--YGP-----GILDLAHQPDEWVGIADMVDSAKVMALVL 418 (427)
T ss_pred HHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEEE--ECC-----CCccccCCCCceeEHHHHHHHHHHHHHHH
Confidence 999999987787643 2346788999999875 3 4554 464 33467999999999999999999999999
Q ss_pred HHHhcc
Q 036756 310 ISYLDD 315 (321)
Q Consensus 310 ~~~~~~ 315 (321)
.+|+..
T Consensus 419 ~~~~~~ 424 (427)
T PRK13013 419 ADLLAG 424 (427)
T ss_pred HHHhcc
Confidence 999864
No 8
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.2e-41 Score=314.67 Aligned_cols=296 Identities=18% Similarity=0.187 Sum_probs=222.8
Q ss_pred ChHHHHHHHHhCCCceecc--CCCceEEEEecCCCCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC---chH
Q 036756 1 AGQLVRNELASLGIEYTWP--FAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG---HDV 71 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g---~kg 71 (321)
+++||.++|+++||+++.. .+++|++++++. ++|+|+|+|||||||.++...| ||.. +.||++|||| ||+
T Consensus 24 ~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kg 102 (375)
T PRK13009 24 CQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKG 102 (375)
T ss_pred HHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChH
Confidence 4689999999999998642 346899999843 4699999999999998764445 8876 4689999985 689
Q ss_pred HHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCC--CCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 72 HTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGA--LEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 72 ~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
+++++|.|++.|++.+..++++|.|+|++|||++ .|++.+++... ..++|++|+.|+....+.+. .+.. .++|
T Consensus 103 g~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~-~i~~--g~~g 179 (375)
T PRK13009 103 SLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVGEPTSTERLGD-VIKN--GRRG 179 (375)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEcCCCcccCCCC-eEEE--ecce
Confidence 9999999999998877778999999999999975 48998876421 12479999887643222221 1122 3469
Q ss_pred eeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc----CC-------------------CchHH--------
Q 036756 148 SMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE----TD-------------------PLEAR-------- 196 (321)
Q Consensus 148 ~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~----~~-------------------p~~~~-------- 196 (321)
..+++|+++|+++|+|.|+.|.|||..++++|.+|+.+..+. .. |....
T Consensus 180 ~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~G~~~~nvip~~~~~~~diR~~ 259 (375)
T PRK13009 180 SLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDAGTGATNVIPGELEAQFNFRFS 259 (375)
T ss_pred EEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEecCCCCCcccCCcEEEEEEEecC
Confidence 999999999999999999999999999999999997653110 00 10000
Q ss_pred ----------HHHHHHHHhCCeEEEEEeccccCCCCCcc-CCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH
Q 036756 197 ----------VIEMQAAVHQCSATLDFMEEKLRPYPATV-NDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK 265 (321)
Q Consensus 197 ----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~ 265 (321)
.++...+..++++++++ ...+++.. +++++++.+++++++.+|.++. ...+++++|++++...
T Consensus 260 ~~~~~e~i~~~i~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~tda~~~~~~ 333 (375)
T PRK13009 260 TEHTAESLKARVEAILDKHGLDYTLEW----TLSGEPFLTPPGKLVDAVVAAIEAVTGITPE--LSTSGGTSDARFIADY 333 (375)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEE----ecCCCcccCCCcHHHHHHHHHHHHHhCCCce--eeccCCCccHHHHHHc
Confidence 23333344567777776 32333433 3378999999999988787653 3456788999999874
Q ss_pred -hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 266 -MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 266 -~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+|++.| |+.. ..+|++|||+++++|.+++++|.+++.+|+.
T Consensus 334 g~p~v~~--Gp~~------~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 375 (375)
T PRK13009 334 GAQVVEF--GPVN------ATIHKVNECVSVADLEKLTRIYERILERLLA 375 (375)
T ss_pred CCCeEEe--ccCc------ccCCCCCCcEEHHHHHHHHHHHHHHHHHHhC
Confidence 788764 5422 4699999999999999999999999999873
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=316.07 Aligned_cols=290 Identities=20% Similarity=0.189 Sum_probs=216.8
Q ss_pred ChHHHHHHHHhCCCceeccC----------C-------CceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccc---cC
Q 036756 1 AGQLVRNELASLGIEYTWPF----------A-------KTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKS---KN 60 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~----------~-------~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~---~~ 60 (321)
+++||+++|+++|++++... + .+||+|+++++.+++|+|+|||||||++. .||.. ++
T Consensus 42 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~ 118 (402)
T PRK07338 42 MAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLD 118 (402)
T ss_pred HHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEee
Confidence 36899999999999876421 1 15999999654336899999999999753 68975 57
Q ss_pred CCceecC---CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCCCcceEEEeccCCCCCcee
Q 036756 61 NGKMHAC---GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALEKFQGIFGLHVAPELPTGT 136 (321)
Q Consensus 61 ~G~~~g~---g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~ 136 (321)
+|++||+ ||||+++++|+|+++|++.+..++++|.|+|++|||.++ |++.+++++.. +.+++++++++. +.+.
T Consensus 119 ~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~~-~~~~~i~~ep~~--~~~~ 195 (402)
T PRK07338 119 DGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELAR-GKHAALTYEPAL--PDGT 195 (402)
T ss_pred CCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHhc-cCcEEEEecCCC--CCCc
Confidence 8999995 589999999999999988776778899999999999874 89999887543 568888887632 2344
Q ss_pred EEeeccccccceeEEEEEEEecCCCCCC-CCCCCCHHHHHHHHHHHHHHhhccc----CC-------------CchHH--
Q 036756 137 IGSRPGPMLAGSMRFLAVIEGKGGHAAM-PHATRDPVLAASFAILALQQIVSRE----TD-------------PLEAR-- 196 (321)
Q Consensus 137 ~~~~~g~~~~g~~~~~i~v~G~~aHss~-p~~g~nAi~~~~~~i~~l~~~~~~~----~~-------------p~~~~-- 196 (321)
+.. .++|..+++|+++|+++|+|. |+.|.|||..+++++.+|+++.... .+ |....
T Consensus 196 v~~----~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~t~~vg~i~gG~~~nvVP~~a~~~ 271 (402)
T PRK07338 196 LAG----ARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELALALHALNGQRDGVTVNVAKIDGGGPLNVVPDNAVLR 271 (402)
T ss_pred EEe----ecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHHHHHhhhccCCCcEEEEEEEecCCCCceeccccEEE
Confidence 322 347999999999999999995 8999999999999999998774321 00 11000
Q ss_pred -------------H---HHHHHH----HhCCeEEEEEeccccCCCCCcc---CCHHHHHHHHHHHHhhcCCcceeccCCC
Q 036756 197 -------------V---IEMQAA----VHQCSATLDFMEEKLRPYPATV---NDEEMYEHAKKVGTSLLGEANVHLLPMA 253 (321)
Q Consensus 197 -------------~---i~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 253 (321)
+ ++...+ ..+++++++. ...+|+.. +++++++.++++.++. |..+. ...+
T Consensus 272 ~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~ 344 (402)
T PRK07338 272 FNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHG----GFGRPPKPIDAAQQRLFEAVQACGAAL-GLTID--WKDS 344 (402)
T ss_pred EEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEc----cccCCCCCCCcchHHHHHHHHHHHHHc-CCCcc--cccC
Confidence 2 222222 2345555432 22344433 4557999999988775 76543 3457
Q ss_pred cCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 254 MGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 254 ~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
++++|++++... +|+++ ++|+.. ..+|++|||+++++|.+++++|+.++.+|+.
T Consensus 345 ~g~tDa~~~~~~giP~v~-~~Gpg~------~~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~ 399 (402)
T PRK07338 345 GGVCDGNNLAAAGLPVVD-TLGVRG------GNIHSEDEFVILDSLVERAQLSALILMRLAQ 399 (402)
T ss_pred CccchHHHHhhcCCCeEe-ccCCCC------CCCCCccceEehhhHHHHHHHHHHHHHHHhc
Confidence 889999999865 99985 346532 5689999999999999999999999999864
No 10
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-41 Score=316.31 Aligned_cols=294 Identities=18% Similarity=0.184 Sum_probs=220.4
Q ss_pred hHHHHHHHHhCCCc-eeccC-------C--CceEEEEecCC-CCCEEEEEeccccCCCCCCC---CCCccc-cCCCceec
Q 036756 2 GQLVRNELASLGIE-YTWPF-------A--KTGIVASVGSG-VQPWFGLRADMDALPIQEMV---EWEHKS-KNNGKMHA 66 (321)
Q Consensus 2 a~~l~~~L~~~G~~-~~~~~-------~--~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~---~~pf~~-~~~G~~~g 66 (321)
++||+++|+++||+ ++... + ++|+++++++. ++|+|+|+|||||||.++.. ..||.. +.+|++||
T Consensus 33 ~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyG 112 (400)
T PRK13983 33 AEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYG 112 (400)
T ss_pred HHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEe
Confidence 68999999999998 75421 1 58999999764 34799999999999987544 448875 46899999
Q ss_pred CC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc--hhhhHHHc--CCCCCcceEEEeccCCCCCceeEEe
Q 036756 67 CG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG--GAYHMIKE--GALEKFQGIFGLHVAPELPTGTIGS 139 (321)
Q Consensus 67 ~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~l~~~--g~~~~~d~~i~~~~~~~~p~g~~~~ 139 (321)
|| ||++++++|.|++.|++.+..++++|.|+|++|||.++ |++++++. +.+.+.|++++.+. ++|++.. +
T Consensus 113 rG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~~--~~~~~~~-i 189 (400)
T PRK13983 113 RGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPDA--GNPDGSF-I 189 (400)
T ss_pred cCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEecC--CCCCCce-e
Confidence 76 78999999999999998877899999999999999763 89999987 55556788887542 3466642 2
Q ss_pred eccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhcc-------------cCCCch---H----H--
Q 036756 140 RPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQ-IVSR-------------ETDPLE---A----R-- 196 (321)
Q Consensus 140 ~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~-~~~~-------------~~~p~~---~----~-- 196 (321)
. ..++|..+++|+++|+++|+|.|+.|+||+..+++++.+++. +... ..++.. + .
T Consensus 190 ~--~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~nvv 267 (400)
T PRK13983 190 E--IAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFNAKDPLFDPPYSTFEPTKKEANVDNINTI 267 (400)
T ss_pred E--EeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccccceeecCCcCCccc
Confidence 2 245799999999999999999999999999999999999976 3110 011100 0 0
Q ss_pred --------------------HHHHHH---H----HhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceec
Q 036756 197 --------------------VIEMQA---A----VHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHL 249 (321)
Q Consensus 197 --------------------~i~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~ 249 (321)
+.+.+. + ..+.++++++... ....++...++++++.+.+++++++|.++.
T Consensus 268 p~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~-- 344 (400)
T PRK13983 268 PGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQAPPPTPPDSEIVKKLKRAIKEVRGIEPK-- 344 (400)
T ss_pred CCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cCCccCCCCCcHHHHHHHHHHHHhcCCCce--
Confidence 222222 1 2345566654210 011233556788999999999998787654
Q ss_pred cCCCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 036756 250 LPMAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAIS 311 (321)
Q Consensus 250 ~~~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~ 311 (321)
...+.+++|++++.. .+|++.+ |+. . ..+|++||+++++++.+++++|.+++.+
T Consensus 345 ~~~~~g~td~~~~~~~gip~v~~--Gp~-----~-~~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 345 VGGIGGGTVAAFLRKKGYPAVVW--STL-----D-ETAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred eeeecCcHHHHHHHHcCCCEEEe--CCc-----c-ccCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 345678899999976 4999875 542 2 4799999999999999999999998864
No 11
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.4e-41 Score=315.62 Aligned_cols=297 Identities=21% Similarity=0.247 Sum_probs=223.5
Q ss_pred ChHHHHHHHHhCCCceeccC----CCceEEEEecCCCCCEEEEEeccccCCCCC-CCCCCccccCCCceecCC---chHH
Q 036756 1 AGQLVRNELASLGIEYTWPF----AKTGIVASVGSGVQPWFGLRADMDALPIQE-MVEWEHKSKNNGKMHACG---HDVH 72 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~----~~~nvia~~~~~~~~~i~l~~H~DtVp~~~-~~~~pf~~~~~G~~~g~g---~kg~ 72 (321)
+++||+++|+++|++++... ..+||++++++.++|+|+|+|||||||.++ ++..||. .++|++||+| ||++
T Consensus 62 ~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~ill~~H~D~Vp~~~~w~~~Pf~-~~~~~iyGrG~~D~kgg 140 (410)
T PRK06133 62 VAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRIMLIAHMDTVYLPGMLAKQPFR-IDGDRAYGPGIADDKGG 140 (410)
T ss_pred HHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceEEEEeecCccCCCCccCCCCEE-EECCEEECCccccchHH
Confidence 36899999999999986532 357999999654458999999999999854 3455886 5689999855 7999
Q ss_pred HHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 73 TTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 73 ~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
++++|+|++.|++.+..++++|.|+|++|||.+ .|++.++++.. .++|++|++|++. +.+.+.+ .++|..++
T Consensus 141 ~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~-~~~d~~i~~ep~~--~~~~v~~----~~~G~~~~ 213 (410)
T PRK06133 141 VAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAELA-AQHDVVFSCEPGR--AKDALTL----ATSGIATA 213 (410)
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHHHh-ccCCEEEEeCCCC--CCCCEEE----eccceEEE
Confidence 999999999999877677899999999999987 59999998743 3579999988542 2234433 35799999
Q ss_pred EEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhccc----CC-------------CchHH---------------H-
Q 036756 152 LAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSRE----TD-------------PLEAR---------------V- 197 (321)
Q Consensus 152 ~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~~----~~-------------p~~~~---------------~- 197 (321)
+++++|+++||+ .|+.|.|||..+++++..|+++.... .+ |.... +
T Consensus 214 ~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~ 293 (410)
T PRK06133 214 LLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGDPAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLE 293 (410)
T ss_pred EEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccCCCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHH
Confidence 999999999985 89999999999999999998764211 01 11100 2
Q ss_pred --HHHHHH---HhCCeEEEEEeccccCCCCCccC---CHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH-hhh
Q 036756 198 --IEMQAA---VHQCSATLDFMEEKLRPYPATVN---DEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAA 268 (321)
Q Consensus 198 --i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~ 268 (321)
++...+ ..++++++++ ...+|++.+ ++.+++.++++.++. +.........+++++|++++... +|+
T Consensus 294 ~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~ 368 (410)
T PRK06133 294 ADLQEKVKNKLVPDTEVTLRF----ERGRPPLEANAASRALAEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAA 368 (410)
T ss_pred HHHHHHHhccCCCCeEEEEEe----ccccCCcccCcchHHHHHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCc
Confidence 222222 1356666665 335566544 346777787777664 54432111346789999999875 888
Q ss_pred eEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhccc
Q 036756 269 ALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDDH 316 (321)
Q Consensus 269 ~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~~ 316 (321)
+++++|+.. .++|++|||++++++..++++|.+++.++++++
T Consensus 369 v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~~~~~~~~~~~~ 410 (410)
T PRK06133 369 VLEGFGLVG------FGAHSNDEYIELNSIVPRLYLLTRMIMELSRDK 410 (410)
T ss_pred eEecccCCC------CCCCCCCcEEEcccHHHHHHHHHHHHHHhhcCC
Confidence 886666532 569999999999999999999999999998763
No 12
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=3.8e-41 Score=310.82 Aligned_cols=294 Identities=19% Similarity=0.228 Sum_probs=220.6
Q ss_pred ChHHHHHHHHhCCCceecc--CCCceEEEEecCCCCCEEEEEeccccCCCCCC---CCCCccc-cCCCceecCC---chH
Q 036756 1 AGQLVRNELASLGIEYTWP--FAKTGIVASVGSGVQPWFGLRADMDALPIQEM---VEWEHKS-KNNGKMHACG---HDV 71 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~---~~~pf~~-~~~G~~~g~g---~kg 71 (321)
+++||+++|+++||+++.. .+.+|+++++++ .+|+|+|+||+||||+++. +..||+. .+||++|||| ||+
T Consensus 21 ~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kg 99 (370)
T TIGR01246 21 CQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKG 99 (370)
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchH
Confidence 4689999999999997652 346799998754 4699999999999998753 4458976 4789999985 689
Q ss_pred HHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCC--CCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 72 HTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGA--LEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 72 ~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
++++++.|++.|++.+..++++|.|+|++|||++ .|++.+++... ...+|++|+.|++...+.+.. +. ..++|
T Consensus 100 g~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep~~~~~~~~~-i~--~~~~G 176 (370)
T TIGR01246 100 SLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEPSSVKKLGDV-IK--NGRRG 176 (370)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCCCCcccCCce-EE--EeeeE
Confidence 9999999999888776678899999999999976 48888875311 124799998876432222221 12 23479
Q ss_pred eeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc----C-----C--------------CchHH--------
Q 036756 148 SMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE----T-----D--------------PLEAR-------- 196 (321)
Q Consensus 148 ~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~----~-----~--------------p~~~~-------- 196 (321)
..+++++++|+++|++.|+.|.|||..+++++..|+...... . + |....
T Consensus 177 ~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~~~~nvvP~~~~~~~diR~~ 256 (370)
T TIGR01246 177 SITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGTGANNVIPGELYVQFNLRFS 256 (370)
T ss_pred EEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCCCCCcccCCceEEEEEEecC
Confidence 999999999999999999999999999999999998652110 0 0 10000
Q ss_pred ----------HHHHHHHHhCCeEEEEEeccccCCC-CCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH
Q 036756 197 ----------VIEMQAAVHQCSATLDFMEEKLRPY-PATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK 265 (321)
Q Consensus 197 ----------~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~ 265 (321)
.++..++..++.+++++ ...+ |...+++++++.+++++++++|..+. +..+++++|++++...
T Consensus 257 ~~~~~~~v~~~i~~~~~~~~~~~~v~~----~~~~~p~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~~~ 330 (370)
T TIGR01246 257 TEVSDEILKQRVEAILDQHGLDYDLEW----SLSGEPFLTNDGKLIDKAREAIEETNGIKPE--LSTGGGTSDGRFIALM 330 (370)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCEEEEE----ecCCcceeCCCCHHHHHHHHHHHHHhCCCCc--eecCCCCchHHHHHHc
Confidence 34444455677777775 2222 32334778999999999987786553 3456788999999864
Q ss_pred -hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 266 -MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 266 -~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
+|++.| |++. ..+|++||++++++|.+++++|..++.+|
T Consensus 331 g~p~~~~--Gp~~------~~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 331 GAEVVEF--GPVN------ATIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred CCCEEEe--cCCc------ccCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 888764 5432 46899999999999999999999999764
No 13
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=1.4e-40 Score=306.88 Aligned_cols=289 Identities=17% Similarity=0.155 Sum_probs=213.2
Q ss_pred hHHHHHHHHhCCCceeccC---C-CceEEEEecCC--CCCEEEEEeccccCCC-CCCCCCCccccCCCceecCC---chH
Q 036756 2 GQLVRNELASLGIEYTWPF---A-KTGIVASVGSG--VQPWFGLRADMDALPI-QEMVEWEHKSKNNGKMHACG---HDV 71 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~---~-~~nvia~~~~~--~~~~i~l~~H~DtVp~-~~~~~~pf~~~~~G~~~g~g---~kg 71 (321)
++||+++|+++|++++... + ..|+++++++. .+|+|+|+|||||||+ +.+..+||. +++|++|||| |||
T Consensus 37 ~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~~~~~~~p~~-~~~g~lyGrG~~D~Kg 115 (376)
T PRK07473 37 LDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPVGTLEKLPWR-REGNKCYGPGILDMKG 115 (376)
T ss_pred HHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCCCCccCCCeE-EECCEEEcCchhhchH
Confidence 5789999999999987532 2 24799998642 3589999999999965 344567895 6689999976 899
Q ss_pred HHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeE
Q 036756 72 HTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMR 150 (321)
Q Consensus 72 ~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~ 150 (321)
+++++|.|+++|++.+..++.+|.|+|++|||.++ |++.+++++.. +.|++|+.+++. ..+.+.. .++|..+
T Consensus 116 glaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~iv~ep~~--~~~~v~~----~~~G~~~ 188 (376)
T PRK07473 116 GNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVLVPEPGR--PDNGVVT----GRYAIAR 188 (376)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEEEeCCCC--CCCCEEE----ECeeeEE
Confidence 99999999999988776677899999999999874 99999987543 579999987642 1222322 3579999
Q ss_pred EEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhccc--CC-------------CchHH---------------HHH
Q 036756 151 FLAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSRE--TD-------------PLEAR---------------VIE 199 (321)
Q Consensus 151 ~~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~~--~~-------------p~~~~---------------~i~ 199 (321)
++|+++|+++|++ .|+.|+|||..+++++.+|+++.... .+ |.... .++
T Consensus 189 ~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~vg~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~ 268 (376)
T PRK07473 189 FNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTTEDCTFSVGIVHGGQWVNCVATTCTGEALSMAKRQADLDRGVA 268 (376)
T ss_pred EEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcCCCceEeEeeEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHH
Confidence 9999999999987 79999999999999999998874211 00 11100 222
Q ss_pred HHHHH----hCCeEEEEEeccccCCCCCcc---CCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH-HhhheEE
Q 036756 200 MQAAV----HQCSATLDFMEEKLRPYPATV---NDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ-KMAAALF 271 (321)
Q Consensus 200 ~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~-~~p~~~~ 271 (321)
.+.+. .+++++++. ....|+.. .+++++++++++.+.. |.+.. ...+++++|+++++. .+|++.
T Consensus 269 ~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~- 340 (376)
T PRK07473 269 RMLALSGTEDDVTFTVTR----GVTRPVWEPDAGTMALYEKARAIAGQL-GLSLP--HGSAGGGSDGNFTGAMGIPTLD- 340 (376)
T ss_pred HHHHhhCcCCCeEEEEEc----cccCCCCCCChhHHHHHHHHHHHHHHc-CCCCc--cccCccccHhhhHHhcCCCEEE-
Confidence 23221 234444432 12234432 2346888888776664 76543 345678999999987 499886
Q ss_pred EecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 272 MIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 272 ~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
++|++. ..+|++|||+++++|.+++++|+++++++
T Consensus 341 g~Gpg~------~~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 341 GLGVRG------ADYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred eccCCC------CCCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 346432 46899999999999999999999999764
No 14
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2e-40 Score=309.26 Aligned_cols=290 Identities=14% Similarity=0.136 Sum_probs=215.6
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC-CC-CEEEEEeccccCCCCCC--CCC---Cccc---------------
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG-VQ-PWFGLRADMDALPIQEM--VEW---EHKS--------------- 58 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~~-~~i~l~~H~DtVp~~~~--~~~---pf~~--------------- 58 (321)
+++||.++|+++|++....++++||+|++++. ++ |+|+|+|||||||.++. .+| ||..
T Consensus 33 ~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 112 (404)
T PRK13381 33 LAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRT 112 (404)
T ss_pred HHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccceeech
Confidence 47899999999999644445678999999653 44 99999999999998652 111 1221
Q ss_pred ---------cCCCceec-------CCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcc
Q 036756 59 ---------KNNGKMHA-------CGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQ 121 (321)
Q Consensus 59 ---------~~~G~~~g-------~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d 121 (321)
..+|++|| +|||++++++|.|++.|++.+ .++++|.|+|++|||.+ .|+++++.+++ ++|
T Consensus 113 ~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d 189 (404)
T PRK13381 113 AEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLARF--PVD 189 (404)
T ss_pred HhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHhcC--CCC
Confidence 13667887 778999999999999998764 56889999999999987 59999987754 478
Q ss_pred eEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccC----------
Q 036756 122 GIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSRET---------- 190 (321)
Q Consensus 122 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~~~---------- 190 (321)
++++.|.. +|+ .+.. .++|..|++|+++|+++|++ .|+.|.|||..+++++.+|+++..+..
T Consensus 190 ~~~~~~~~--~~~-~i~~----~~~G~~~~~v~v~Gk~aHa~~~p~~g~NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v 262 (404)
T PRK13381 190 FAYTIDCC--ELG-EVVY----ENFNAASAEITITGVTAHPMSAKGVLVNPILMANDFISHFPRQETPEHTEGREGYIWV 262 (404)
T ss_pred EEEEecCC--Ccc-eEEE----ecCcceEEEEEEEeEecCCCCCcccCcCHHHHHHHHHHhCCccCCCCCCCCcccEEEE
Confidence 88887753 343 3322 35799999999999999988 589999999999999999977632211
Q ss_pred -----CCchHH----------------------HHHHHHHHhC-CeEEEEEeccccCCCC--CccCCHHHHHHHHHHHHh
Q 036756 191 -----DPLEAR----------------------VIEMQAAVHQ-CSATLDFMEEKLRPYP--ATVNDEEMYEHAKKVGTS 240 (321)
Q Consensus 191 -----~p~~~~----------------------~i~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ 240 (321)
+|.... +++.+++.++ +++++++.. ....+ .+..++++++.+++++++
T Consensus 263 ~~i~g~p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~ 340 (404)
T PRK13381 263 NDLQGNVNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTD--QYSNISNSIKDDRRAVDLAFDAMKE 340 (404)
T ss_pred EeEEeCcceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEe--CCchhhcccccCHHHHHHHHHHHHH
Confidence 111000 2233333445 566665421 11111 245688999999999987
Q ss_pred hcCCcceeccCCCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 241 LLGEANVHLLPMAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 241 ~~g~~~~~~~~~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
. |..+. ...+.+++|+++|.. .+|++++++|. ..+|++||||++++|.+++++|.+++.++.
T Consensus 341 ~-g~~~~--~~~~~g~tDa~~~~~~giP~v~~GpG~--------~~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 341 L-GIEPK--VIPMRGGTDGAALSAKGLPTPNLFTGA--------HNFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred c-CCCee--eccCCccchHHHHhcCCCCeEEECccc--------cCCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 5 76553 345678999999986 49999876552 458999999999999999999999998774
No 15
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=1.6e-40 Score=310.33 Aligned_cols=292 Identities=16% Similarity=0.137 Sum_probs=214.5
Q ss_pred ChHHHHHHHHhCCCc-eeccCCCceEEEEecCC---CCCEEEEEeccccCCCCCC---------------------CCCC
Q 036756 1 AGQLVRNELASLGIE-YTWPFAKTGIVASVGSG---VQPWFGLRADMDALPIQEM---------------------VEWE 55 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~-~~~~~~~~nvia~~~~~---~~~~i~l~~H~DtVp~~~~---------------------~~~p 55 (321)
+++||+++|+++|++ ++. +..+||++++++. ++|+|+|+|||||||+.+. +.|+
T Consensus 34 ~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 112 (408)
T PRK05469 34 LAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVL 112 (408)
T ss_pred HHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEe
Confidence 378999999999997 544 3467899999653 2599999999999987432 1233
Q ss_pred cccc--------CCCce-------ecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCc
Q 036756 56 HKSK--------NNGKM-------HACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKF 120 (321)
Q Consensus 56 f~~~--------~~G~~-------~g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~ 120 (321)
|.+. .++.+ +|+|||++++++|+|+++|++.+..++++|.|+|++|||++.|++.++.++. +.
T Consensus 113 ~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~ 190 (408)
T PRK05469 113 SPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIGRGADKFDVEKF--GA 190 (408)
T ss_pred chHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccCCCHHHhhhhhc--CC
Confidence 2211 11223 4589999999999999999887666789999999999998778988875533 35
Q ss_pred ceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcccC--------C
Q 036756 121 QGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSRET--------D 191 (321)
Q Consensus 121 d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~~~--------~ 191 (321)
|+++..++ .+.|.+.+ .++|..+++|+++|+++|++ .|+.|.|||..+++++..|+++..... +
T Consensus 191 ~~~~~~~~---~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~ 263 (408)
T PRK05469 191 DFAYTVDG---GPLGELEY----ENFNAASAKITIHGVNVHPGTAKGKMVNALLLAADFHAMLPADETPETTEGYEGFYH 263 (408)
T ss_pred cEEEEecC---CCcceEEe----ccCceeEEEEEEeeecCCCCCCcccccCHHHHHHHHHHhCCCCCCCCCCCCceEEEE
Confidence 77776654 34565433 24688999999999999987 589999999999999999886532211 1
Q ss_pred -------Cc-------------hHH---------HHHHHHHHh-CCeEEEEEeccccCC-CCCccCCHHHHHHHHHHHHh
Q 036756 192 -------PL-------------EAR---------VIEMQAAVH-QCSATLDFMEEKLRP-YPATVNDEEMYEHAKKVGTS 240 (321)
Q Consensus 192 -------p~-------------~~~---------~i~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 240 (321)
|. ... +++++++.+ ++++++++... ... .++..+++++++.+++++++
T Consensus 264 ~g~i~ggp~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lv~~~~~a~~~ 342 (408)
T PRK05469 264 LTSIKGTVEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQ-YYNMREKIEPHPHIVDLAKQAMED 342 (408)
T ss_pred EEEEEEccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeeh-hhhhhhhhcCCHHHHHHHHHHHHH
Confidence 10 000 233333344 57777776211 111 12467889999999999988
Q ss_pred hcCCcceeccCCCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 241 LLGEANVHLLPMAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 241 ~~g~~~~~~~~~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
. |..+. ..++.+++|+++|+. .+|++++++|. ..+|++|||+++++|..++++|.+++..|++
T Consensus 343 ~-g~~~~--~~~~~ggtD~~~~~~~giP~v~~gpG~--------~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~ 406 (408)
T PRK05469 343 L-GIEPI--IKPIRGGTDGSQLSFMGLPCPNIFTGG--------HNFHGKFEFVSLESMEKAVEVIVEIAELTAE 406 (408)
T ss_pred c-CCCcE--EecCCCcccHHHHhhCCCceEEECcCc--------ccCcCcceeeEHHHHHHHHHHHHHHHHHHhc
Confidence 5 76653 245679999999986 49998765441 3599999999999999999999999999875
No 16
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=2.5e-40 Score=308.69 Aligned_cols=288 Identities=17% Similarity=0.153 Sum_probs=212.9
Q ss_pred hHHHHHHHHhCCCc-eeccCCCceEEEEecCCCC---CEEEEEeccccCCCCCCC-------------------------
Q 036756 2 GQLVRNELASLGIE-YTWPFAKTGIVASVGSGVQ---PWFGLRADMDALPIQEMV------------------------- 52 (321)
Q Consensus 2 a~~l~~~L~~~G~~-~~~~~~~~nvia~~~~~~~---~~i~l~~H~DtVp~~~~~------------------------- 52 (321)
++||+++|+++|++ ++.+.+.+||+|++++..+ |+|+|.+||||||..+..
T Consensus 36 a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~ 115 (410)
T TIGR01882 36 GNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLD 115 (410)
T ss_pred HHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEC
Confidence 78999999999997 7765436899999966433 999999999999843221
Q ss_pred ---CCCccc------c--CCCceecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCcc
Q 036756 53 ---EWEHKS------K--NNGKMHACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKFQ 121 (321)
Q Consensus 53 ---~~pf~~------~--~~G~~~g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~d 121 (321)
..||+. + .++.+||+|||+++|++|.|++.|++.+..++++|.|+|++|||++.|++.+..++. +.|
T Consensus 116 ~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~ 193 (410)
T TIGR01882 116 PDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIGRGAHKFDVKDF--NAD 193 (410)
T ss_pred hHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCCcCcchhhhhhc--Ccc
Confidence 224442 2 345899999999999999999999886444689999999999998888988876543 456
Q ss_pred eEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhccc--------CC-
Q 036756 122 GIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAAMP-HATRDPVLAASFAILALQQIVSRE--------TD- 191 (321)
Q Consensus 122 ~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss~p-~~g~nAi~~~~~~i~~l~~~~~~~--------~~- 191 (321)
+.+.+++ +|+|.+.+. ..|..+++|+++|+++|++.+ +.|.|||..+.+++..|....... .+
T Consensus 194 ~~~~i~g---ep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~g~nAi~~a~~~~~~l~~~~~~~~t~~~~g~i~~ 266 (410)
T TIGR01882 194 FAYTVDG---GPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGKMINAAQIAIDLHNLLPEDDRPEYTEGREGFFHL 266 (410)
T ss_pred EEEEeCC---CCCCeEEEc----cccceEEEEEEEEEecCcccChHHHHHHHHHHHHHHHhcCCcCCCccccceeEEEEE
Confidence 6666543 567765443 247899999999999999965 689999999999987765432110 00
Q ss_pred ------CchH-----------H-----------HHHHHHHHhCC-eEEEEEeccccCCCC----CccCCHHHHHHHHHHH
Q 036756 192 ------PLEA-----------R-----------VIEMQAAVHQC-SATLDFMEEKLRPYP----ATVNDEEMYEHAKKVG 238 (321)
Q Consensus 192 ------p~~~-----------~-----------~i~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~ 238 (321)
|... . +++.+++.+++ .+++++ ...|+ ...+++++++.+++++
T Consensus 267 g~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~----~~~~~~~~~~~~~~~~lv~~~~~a~ 342 (410)
T TIGR01882 267 LSIDGTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDM----NDQYYNMAEKIEKVMEIVDIAKQAM 342 (410)
T ss_pred EeEEEecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEE----EeeecChhhccCCCHHHHHHHHHHH
Confidence 1100 0 23333334553 456655 22232 3567889999999999
Q ss_pred HhhcCCcceeccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 239 TSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 239 ~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
++. |..+. ..++.+++|+++|+.. +|++.+++| . .++|++|||+++++|.+++++|.+++..+.
T Consensus 343 ~~~-G~~~~--~~~~~ggtDa~~~~~~Gip~~~~G~G-------~-~~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 343 ENL-GIEPK--ISPIRGGTDGSQLSYMGLPTPNIFAG-------G-ENMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred HHh-CCCCc--ccccceechHHHHHhCCCCCCeEcCC-------c-ccCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 885 76553 3456789999999874 898876443 2 569999999999999999999999998875
No 17
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=9e-40 Score=304.03 Aligned_cols=295 Identities=16% Similarity=0.153 Sum_probs=214.1
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC---chHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG---HDVHT 73 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g---~kg~~ 73 (321)
+++||.++|+++||++.......|++++++. ++|+|+|+|||||||+++...| ||.. +++|++|||| ||+++
T Consensus 35 ~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~-~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~ 113 (395)
T TIGR03320 35 VAERIKEEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGI 113 (395)
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCEEEEeCC-CCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchH
Confidence 3689999999999984332345799999853 3489999999999998765555 8875 4689999976 79999
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEecCCCccc--hhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 74 TMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG--GAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 74 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
+++|.|+++|++.+..++++|.|++++|||.++ +.+.++++..+ ++|++|+.+++. ..+. . .++|..++
T Consensus 114 aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~iv~ep~~----~~i~--~--g~~G~~~~ 184 (395)
T TIGR03320 114 ASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI-KPEFVVITEPTD----MNIY--R--GQRGRMEI 184 (395)
T ss_pred HHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-CCCEEEEcCCCc----cceE--E--ecceEEEE
Confidence 999999999998776678899999999999754 34667765444 579999876421 2222 2 35799999
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CC-----------------------CchH------------
Q 036756 152 LAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE-TD-----------------------PLEA------------ 195 (321)
Q Consensus 152 ~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~-----------------------p~~~------------ 195 (321)
+|+++|+++|||.|+.|.|||..+++++.+|+++.... .+ |...
T Consensus 185 ~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~ 264 (395)
T TIGR03320 185 KVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE 264 (395)
T ss_pred EEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCC
Confidence 99999999999999999999999999999998763210 01 0000
Q ss_pred ---HHHHHHHH---HhCCeEEEEEecccc-----------CCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCC
Q 036756 196 ---RVIEMQAA---VHQCSATLDFMEEKL-----------RPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGA 256 (321)
Q Consensus 196 ---~~i~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 256 (321)
.+.+.+.+ ..+..+++++..... ..+|++ ..++++++.+++++++++|.++.. ....++
T Consensus 265 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~~--~~~~~~ 342 (395)
T TIGR03320 265 TWEYALEQIRNLPAVQGAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGKEPGV--DKWTFS 342 (395)
T ss_pred CHHHHHHHHHHHHhhcCCCceEeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHhCCCCce--eeccee
Confidence 02233322 223334444311000 123443 456789999999999987876532 234566
Q ss_pred CcH-HHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 257 EDF-SFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 257 ~D~-~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+|. +++.. .+|++.+ |+ |+..++|++||||++++|..++++|.+++.+||+
T Consensus 343 ~~~~~~~~~~g~p~v~~--Gp-----g~~~~aH~~nE~v~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 343 TNGVSIMGRHGIPVIGF--GP-----GDEDQAHAPNEKTWKEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred cccceehhhcCCCEEEE--CC-----CchhhccCCCcEEEHHHHHHHHHHHHHHHHHhhC
Confidence 777 45554 4998865 54 3346899999999999999999999999999984
No 18
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=2e-40 Score=306.54 Aligned_cols=287 Identities=16% Similarity=0.195 Sum_probs=211.4
Q ss_pred ChHHHHHHHHhCCCceecc---CCCc----eEEEEecCC-CCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC
Q 036756 1 AGQLVRNELASLGIEYTWP---FAKT----GIVASVGSG-VQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG 68 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~---~~~~----nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g 68 (321)
+++||+++|+++|++++.. .+.. |+++.+.+. ++|+|+|++||||||.++...| ||.. +++|++||||
T Consensus 23 ~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG 102 (375)
T TIGR01910 23 IANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRG 102 (375)
T ss_pred HHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCChhhCcCCCCCcEEECCEEEecC
Confidence 4789999999999998642 1223 356665443 4689999999999998754444 8876 5689999865
Q ss_pred ---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccc
Q 036756 69 ---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPM 144 (321)
Q Consensus 69 ---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~ 144 (321)
||++++++|.|++.|++.+..++++|.|+|+++||.+ .|++.+++++.+.++|++|+.+++. .+.+.+ .
T Consensus 103 ~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~i~~~~~~---~~~v~~----~ 175 (375)
T TIGR01910 103 ATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGVLIPEPSG---GDNIVI----G 175 (375)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEEEECCCCC---CCceEE----E
Confidence 6899999999999999877778999999999999987 5999999988765589999876421 123322 3
Q ss_pred ccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc--------------CCC-------------chH--
Q 036756 145 LAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE--------------TDP-------------LEA-- 195 (321)
Q Consensus 145 ~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~--------------~~p-------------~~~-- 195 (321)
++|..+++|+++|+++|+|.|+.|.|||..++++|.+|+++.... .++ ...
T Consensus 176 ~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~~~~ 255 (375)
T TIGR01910 176 HKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPITFNPGVIKGGDWVNSVPDYCEF 255 (375)
T ss_pred ecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCccccceeEECCCCcCcCCCEEEE
Confidence 579999999999999999999999999999999999998764210 011 000
Q ss_pred ------------H----HHHH----HHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcC
Q 036756 196 ------------R----VIEM----QAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMG 255 (321)
Q Consensus 196 ------------~----~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 255 (321)
. .++. .+...+++++++.... .+.......++++++.+++++++.+|.++. ...+.+
T Consensus 256 ~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~g 332 (375)
T TIGR01910 256 SIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNETPPDSRLVKALEAIIKKVRGIEPE--VLVSTG 332 (375)
T ss_pred EEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcCCCCCCHHHHHHHHHHHHHhCCCCe--Eeeecc
Confidence 0 1222 2222345555543110 111124456778999999999987787653 345778
Q ss_pred CCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHH
Q 036756 256 AEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAAL 304 (321)
Q Consensus 256 ~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~ 304 (321)
++|++++... +|++.+ |++ ....+|++|||++++++.+++++
T Consensus 333 ~tD~~~~~~~gip~v~~--Gpg-----~~~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 333 GTDARFLRKAGIPSIVY--GPG-----DLETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred chhHHHHHHcCCcEEEE--CCC-----CccccCCCCceeEHHHHHHHhhC
Confidence 9999999875 999865 542 23689999999999999998864
No 19
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=1.2e-39 Score=303.65 Aligned_cols=302 Identities=17% Similarity=0.161 Sum_probs=216.9
Q ss_pred ChHHHHHHHHhCCCceecc---CCCceEEEEecCC-C-CCEEEEEeccccCCCCC--CCCCCcccc--CCCceecCC---
Q 036756 1 AGQLVRNELASLGIEYTWP---FAKTGIVASVGSG-V-QPWFGLRADMDALPIQE--MVEWEHKSK--NNGKMHACG--- 68 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~---~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~--~~~~pf~~~--~~G~~~g~g--- 68 (321)
+++||+++|+++|++++.. .+++|++++++++ + .|+|+|+|||||||+++ |+.+||... +||++||||
T Consensus 33 ~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D 112 (400)
T TIGR01880 33 CVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQD 112 (400)
T ss_pred HHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEccccc
Confidence 3789999999999987542 3578999999653 3 38999999999999864 356699863 589999976
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc--hhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccccc
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG--GAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLA 146 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~ 146 (321)
||++++++|.|++.|++.+..++++|.|+|++|||.++ |++++++++.+.+.|++++.+.+...|++... .+..++
T Consensus 113 ~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--i~~~~k 190 (400)
T TIGR01880 113 MKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALNLGFALDEGLASPDDVYR--VFYAER 190 (400)
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCceEEEEcCCCcccccccc--eeEEee
Confidence 58999999999999998877789999999999999863 99999988765556777877543223444222 233578
Q ss_pred ceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc-------c--cC--------C-------------CchHH
Q 036756 147 GSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVS-------R--ET--------D-------------PLEAR 196 (321)
Q Consensus 147 g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~-------~--~~--------~-------------p~~~~ 196 (321)
|..+++|+++|+++|||.|. +.||+..|++++..|+++.. . .. + |....
T Consensus 191 G~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvIP~~a~ 269 (400)
T TIGR01880 191 VPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVTSVNLTKLKGGVQSNVIPSEAE 269 (400)
T ss_pred EEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccccccceeecceeccCCcCCcCCCccE
Confidence 99999999999999999865 47999999999988765421 0 00 0 00000
Q ss_pred ---------------H---HHHHHHHhCCeEEEEEeccccCCCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCC
Q 036756 197 ---------------V---IEMQAAVHQCSATLDFMEEKLRPYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGA 256 (321)
Q Consensus 197 ---------------~---i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 256 (321)
+ ++...+.....+++++... ....++ ...++++++.+++++++. +.... +..+.++
T Consensus 270 ~~~diR~~p~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lv~~l~~a~~~~-~~~~~--~~~~~g~ 345 (400)
T TIGR01880 270 AGFDIRLAPSVDFEEMENRLDEWCADAGEGVTYEFSQH-SGKPLVTPHDDSNPWWVAFKDAVKEM-GCTFK--PEILPGS 345 (400)
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhccCCceEEEEeec-CCCCCCCCCCCCCHHHHHHHHHHHHc-CCeec--ceeecCc
Confidence 2 2222222222334443111 111122 234668999999999986 54322 2356789
Q ss_pred CcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 257 EDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 257 ~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+|++++.. .+|++.| |+.. +....+|++|||+++++|.+++++|.+++.+|.+
T Consensus 346 tDa~~~~~~gip~v~f--gp~~---~~~~~aH~~dE~i~i~~l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 346 TDSRYIRAAGVPALGF--SPMN---NTPVLLHDHNEFLNEAVFLRGIEIYQTLISALAS 399 (400)
T ss_pred chHHHHHhCCCCeEEE--CCcc---CCcccccCCCCceEHHHHHHHHHHHHHHHHHhhc
Confidence 99999987 4999765 4422 1124699999999999999999999999999864
No 20
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.5e-39 Score=302.60 Aligned_cols=289 Identities=20% Similarity=0.251 Sum_probs=218.6
Q ss_pred ChHHHHHHHHhCCCceeccC---C--------CceEEEEecCCCCCEEEEEeccccCCCCCC--CCCCcccc-CCCceec
Q 036756 1 AGQLVRNELASLGIEYTWPF---A--------KTGIVASVGSGVQPWFGLRADMDALPIQEM--VEWEHKSK-NNGKMHA 66 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~---~--------~~nvia~~~~~~~~~i~l~~H~DtVp~~~~--~~~pf~~~-~~G~~~g 66 (321)
+++||+++|+++||+++... + ++|+++..+++ +|+|+|+|||||||.++. +..||+.. ++|++||
T Consensus 31 ~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~g 109 (394)
T PRK08651 31 IAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSG-NPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYG 109 (394)
T ss_pred HHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCC-CceEEEEeeeeeecCCCCccccCCCCcEEECCEEEe
Confidence 46899999999999876521 1 24578876443 489999999999998753 45689864 6899999
Q ss_pred CC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecc
Q 036756 67 CG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPG 142 (321)
Q Consensus 67 ~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g 142 (321)
|| ||++++++|+|++.|++.+ +++|.|+|++|||++ .|++++++++.+ ++|++++.++.. .+.+..
T Consensus 110 rG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~~~~~---~~~i~~--- 179 (394)
T PRK08651 110 RGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGKV-TPDYVIVGEPSG---LDNICI--- 179 (394)
T ss_pred cCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccCC-CCCEEEEecCCC---CCceEE---
Confidence 76 5999999999999998654 789999999999987 499999998765 478888876432 113322
Q ss_pred ccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----------c-------CCC--chHH-------
Q 036756 143 PMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR----------E-------TDP--LEAR------- 196 (321)
Q Consensus 143 ~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~----------~-------~~p--~~~~------- 196 (321)
.++|..+++|+++|+++|++.|+.|.|||..+++++.+|++...+ . ... ..+.
T Consensus 180 -~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ig~~~i~gG~~~nviP 258 (394)
T PRK08651 180 -GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYDDERGAKPTVTLGGPTVEGGTKTNIVP 258 (394)
T ss_pred -ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccccccccccCCCceeecceeeeCCCCCCccC
Confidence 357999999999999999999999999999999999999753110 0 000 0000
Q ss_pred --------------------------HHHHHHHHhCCeEEEEEeccccCCCCCccC--CHHHHHHHHHHHHhhcCCccee
Q 036756 197 --------------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVN--DEEMYEHAKKVGTSLLGEANVH 248 (321)
Q Consensus 197 --------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~g~~~~~ 248 (321)
+++.+++.+++++++++ ...+++... ++++++.+++++++++|..+.
T Consensus 259 ~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~----~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~- 333 (394)
T PRK08651 259 GYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEI----TPFSEAFVTDPDSELVKALREAIREVLGVEPK- 333 (394)
T ss_pred CEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEE----ecccCCccCCCCCHHHHHHHHHHHHHhCCCCc-
Confidence 23333334567777765 333455443 457999999999997787653
Q ss_pred ccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 249 LLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 249 ~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+..+.+++|+++|... +|++.| |++ ....+|++||++++++|..++++|.+++.++.+
T Consensus 334 -~~~~~g~tD~~~~~~~gip~v~~--Gpg-----~~~~~H~~~E~i~~~~l~~~~~i~~~~i~~l~~ 392 (394)
T PRK08651 334 -KTISLGGTDARFFGAKGIPTVVY--GPG-----ELELAHAPDEYVEVKDVEKAAKVYEEVLKRLAK 392 (394)
T ss_pred -eeeecCcccHHHHhhCCCcEEEE--CCC-----ChHhcCCCCceeEHHHHHHHHHHHHHHHHHhhc
Confidence 3456789999999985 999765 542 235799999999999999999999999999853
No 21
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=303.62 Aligned_cols=299 Identities=14% Similarity=0.130 Sum_probs=216.2
Q ss_pred ChHHHHHHHHhCCCceecc--CCCceEEEEecCCCCCEEEEEeccccCCCCC---CCCCCccc-cCCCceecC---CchH
Q 036756 1 AGQLVRNELASLGIEYTWP--FAKTGIVASVGSGVQPWFGLRADMDALPIQE---MVEWEHKS-KNNGKMHAC---GHDV 71 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~---~~~~pf~~-~~~G~~~g~---g~kg 71 (321)
+++||+++|+++||+++.. .+++|++++++++++|+|+|+|||||||++. |+..||+. ++||++||| ||||
T Consensus 27 ~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKg 106 (436)
T PRK06446 27 TANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKG 106 (436)
T ss_pred HHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcH
Confidence 4789999999999988643 2578999999654468999999999999854 45558975 468999985 5899
Q ss_pred HHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcC--CCCCcceEEEeccCCCCCceeEEeeccccccce
Q 036756 72 HTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEG--ALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGS 148 (321)
Q Consensus 72 ~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g--~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~ 148 (321)
+++++|.|++.|++.+ .++++|.|+|++|||.++ |+++++++. .+ ++|++|+ +++...+.+.-.+. ..++|.
T Consensus 107 glaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~vi~-E~~~~~~~~~~~i~--~~~kG~ 181 (436)
T PRK06446 107 TLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKL-KADSVIM-EGAGLDPKGRPQIV--LGVKGL 181 (436)
T ss_pred HHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHh-CCCEEEE-CCCCccCCCCeEEE--EecCeE
Confidence 9999999999887654 578899999999999874 888888762 23 4688875 54332233321122 246899
Q ss_pred eEEEEEEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHhh-----------------------c----------------
Q 036756 149 MRFLAVIEG--KGGHAAMPHATRDPVLAASFAILALQQIV-----------------------S---------------- 187 (321)
Q Consensus 149 ~~~~i~v~G--~~aHss~p~~g~nAi~~~~~~i~~l~~~~-----------------------~---------------- 187 (321)
.|++++++| +++|||.|+.|.|||..+++++.+|.+.. .
T Consensus 182 ~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 261 (436)
T PRK06446 182 LYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFK 261 (436)
T ss_pred EEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCc
Confidence 999999999 99999999999999999999999996431 0
Q ss_pred -----------------ccCCC--ch-H-------H----------------------HHHHHH---HHhCCeEEEEEec
Q 036756 188 -----------------RETDP--LE-A-------R----------------------VIEMQA---AVHQCSATLDFME 215 (321)
Q Consensus 188 -----------------~~~~p--~~-~-------~----------------------~i~~~~---~~~~~~~~~~~~~ 215 (321)
...++ .. + . +.+.+. +..+..+++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~~~~~~~~~~~- 340 (436)
T PRK06446 262 ELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQKVGFNGEIIVH- 340 (436)
T ss_pred cccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHHcCCCeEEEEc-
Confidence 00000 00 0 0 222222 233345566552
Q ss_pred cccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH--HhhheEEEecccCCCCCCCCCCCCCCC
Q 036756 216 EKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ--KMAAALFMIGTRNETLKPVVRLHSPYL 291 (321)
Q Consensus 216 ~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~--~~p~~~~~~G~~~~~~g~~~~~H~~~E 291 (321)
..+++. ..++++++.+++++++++|..+... ....+++|+++|.. .+|++.+.+|+++ + ..++|++||
T Consensus 341 ---~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~~gip~v~~~~g~g~---~-~~~~H~~dE 412 (436)
T PRK06446 341 ---GFEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYKLGIRDIVSAIGVGG---Y-YSNAHAPNE 412 (436)
T ss_pred ---CCcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHHhCCCcceeecccCC---C-CcCCcCCCC
Confidence 223332 3467899999999999888765321 23345678888764 4898765555433 1 257999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHh
Q 036756 292 VIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 292 ~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
||++++|.+++++|.+++.++.
T Consensus 413 ~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 413 NIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CcCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998764
No 22
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=2.3e-39 Score=301.54 Aligned_cols=296 Identities=17% Similarity=0.178 Sum_probs=217.0
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC---chHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG---HDVHT 73 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g---~kg~~ 73 (321)
+++||.++|+++||++...+..+|++++++++ .|+|+|++||||||.++...| ||.. +++|++|||| ||+++
T Consensus 37 ~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~-~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~ 115 (399)
T PRK13004 37 VVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG-KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGM 115 (399)
T ss_pred HHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC-CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHH
Confidence 36899999999999854434467999999654 389999999999998654444 7874 4689999975 68999
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 74 TMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 74 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
+++|.|++.|++.+..++++|.|+|++|||.+ .|++++++++.+ ++|++|+.++.. ..+.+ .++|..++
T Consensus 116 aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~-~~d~~i~~e~~~----~~i~~----~~~G~~~~ 186 (399)
T PRK13004 116 ASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI-KPDFVVITEPTD----LNIYR----GQRGRMEI 186 (399)
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC-CCCEEEEccCCC----CceEE----ecceEEEE
Confidence 99999999999887778999999999999964 367888887544 579999976531 22222 35799999
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--cC--------C--------------CchHH-----------
Q 036756 152 LAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR--ET--------D--------------PLEAR----------- 196 (321)
Q Consensus 152 ~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~--~~--------~--------------p~~~~----------- 196 (321)
+|+++|+++|+|.|+.|.|||..+++++.+|+.+... .. + |....
T Consensus 187 ~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~ 266 (399)
T PRK13004 187 RVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGE 266 (399)
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCC
Confidence 9999999999999999999999999999999876432 00 0 10000
Q ss_pred ----HHHHHHH---HhCCeEEEEEecc-----------ccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCC
Q 036756 197 ----VIEMQAA---VHQCSATLDFMEE-----------KLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGA 256 (321)
Q Consensus 197 ----~i~~~~~---~~~~~~~~~~~~~-----------~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 256 (321)
+.+.+.+ .....+++++... ....+|+. ..++++++.+++++++++|.++. .....++
T Consensus 267 ~~~~v~~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~ 344 (399)
T PRK13004 267 TWESVLAEIRALPAVKKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFS 344 (399)
T ss_pred CHHHHHHHHHHHHhhccccceEEEecccCCCcccccccccccccccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccc
Confidence 2222222 2222333332100 01123443 34678999999999998776553 2345667
Q ss_pred CcHHHHHH--HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhcc
Q 036756 257 EDFSFYSQ--KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDD 315 (321)
Q Consensus 257 ~D~~~~~~--~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 315 (321)
+|.+.+.. .+|++.+ |+ |....+|++||++++++|.+++++|.+++.+||.+
T Consensus 345 td~~~~~~~~Gip~v~~--Gp-----g~~~~aH~~nE~i~i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 345 TNGVSIAGRAGIPTIGF--GP-----GKEPLAHAPNEYTWKEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred cCCeEEehhcCCCEEEE--CC-----CcccccCCCCceeEHHHHHHHHHHHHHHHHHHhhc
Confidence 88777643 4998865 53 22357999999999999999999999999999943
No 23
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.6e-39 Score=299.44 Aligned_cols=279 Identities=19% Similarity=0.239 Sum_probs=207.7
Q ss_pred ChHHHHHHHHhCCCceeccC-----CCceEEEEecCCCCCEEEEEeccccCCCCC--CCCCCccc-cCCCceecCC---c
Q 036756 1 AGQLVRNELASLGIEYTWPF-----AKTGIVASVGSGVQPWFGLRADMDALPIQE--MVEWEHKS-KNNGKMHACG---H 69 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~-----~~~nvia~~~~~~~~~i~l~~H~DtVp~~~--~~~~pf~~-~~~G~~~g~g---~ 69 (321)
+++||+++|+++|++++... +++|+++.+++.+.|+|+|+|||||||.++ |+..||+. +++|++|||| |
T Consensus 20 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~ 99 (364)
T TIGR01892 20 LIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDM 99 (364)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCcccc
Confidence 36899999999999876531 368999999653458999999999999864 24458984 6789999977 8
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccce
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGS 148 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~ 148 (321)
|++++++|+|+++|++. .++++|.|+|++|||.+ .|++++++++.+ ++|++++.+ |++...+ ..++|.
T Consensus 100 Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~e-----p~~~~~~---~~~~G~ 168 (364)
T TIGR01892 100 KGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIGE-----PTRLIPV---RAHKGY 168 (364)
T ss_pred chHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEECC-----CCCceeE---EeeceE
Confidence 99999999999999864 47889999999999987 599999998764 578888854 4443222 135799
Q ss_pred eEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---c------------CC-------------CchH-----
Q 036756 149 MRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR---E------------TD-------------PLEA----- 195 (321)
Q Consensus 149 ~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~---~------------~~-------------p~~~----- 195 (321)
.+++|+++|+++|++.|+.|.|||..+++++.+|+++... . .+ |...
T Consensus 169 ~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~~~~~~d 248 (364)
T TIGR01892 169 ASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGVIQGGKAVNIIPGACEFVFE 248 (364)
T ss_pred EEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEeeeecCCCCcccCCeEEEEEE
Confidence 9999999999999999999999999999999999875321 0 00 1000
Q ss_pred ----------H---HHHHHHH-----HhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcC
Q 036756 196 ----------R---VIEMQAA-----VHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMG 255 (321)
Q Consensus 196 ----------~---~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 255 (321)
. .++.+.+ .+++++++++ ...+|+. ..++++++.++++. +..+ ...++
T Consensus 249 iR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~~~~v~~~~~~~----~~~~----~~~~~ 316 (364)
T TIGR01892 249 WRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEV----VSTDPGVNTEPDAELVAFLEELS----GNAP----EVVSY 316 (364)
T ss_pred eecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEE----ccCCCCcCCCCCCHHHHHHHHHh----CCCC----ceecc
Confidence 0 1222221 2456677665 3344443 34567888776543 4322 12456
Q ss_pred CCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 256 AEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 256 ~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
++|+++|... +|++.+ |+ |....+|++|||+++++|.+++++|..++
T Consensus 317 ~tD~~~~~~~gip~v~~--Gp-----g~~~~~H~~~E~i~i~~l~~~~~~~~~~~ 364 (364)
T TIGR01892 317 GTEAPQFQELGAEAVVC--GP-----GDIRQAHQPDEYVEIEDLVRCRAVLARLV 364 (364)
T ss_pred cccHHHHHhCCCcEEEE--CC-----CChHhCCCCCceeeHHHHHHHHHHHHHhC
Confidence 8999999874 998765 43 22357999999999999999999998763
No 24
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=4.1e-39 Score=299.51 Aligned_cols=294 Identities=16% Similarity=0.160 Sum_probs=213.7
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC---chHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG---HDVHT 73 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g---~kg~~ 73 (321)
+++||.++|+++||++.......|+++.++. ..|+|+|+|||||||+++...| ||.. +++|++|||| |||++
T Consensus 35 ~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~-~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~ 113 (395)
T TIGR03526 35 VALRIKQEMEKLGFDKVEIDPMGNVLGYIGH-GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGI 113 (395)
T ss_pred HHHHHHHHHHHcCCceEEEcCCCcEEEEeCC-CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhH
Confidence 3689999999999985332335799999853 3488999999999998765556 7875 4689999987 89999
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 74 TMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 74 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
+++|+|++.|++.+..+++++.|++++|||.+ .|++.+++++.+ ++|++|+.+++. ..+ .. .++|..++
T Consensus 114 aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~i~~ep~~----~~i--~~--g~~G~~~~ 184 (395)
T TIGR03526 114 ASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI-KPEFVVITEPTD----MNI--YR--GQRGRMEI 184 (395)
T ss_pred HHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-CCCEEEecCCCC----ceE--EE--EcceEEEE
Confidence 99999999999877667789999999999953 366778876555 579999876421 122 22 35799999
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-CC-----------------------CchH------------
Q 036756 152 LAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE-TD-----------------------PLEA------------ 195 (321)
Q Consensus 152 ~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~-~~-----------------------p~~~------------ 195 (321)
+|+++|+++|||.|+.|.|||..+++++.+|+.+.... .+ |...
T Consensus 185 ~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~ 264 (395)
T TIGR03526 185 KVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGE 264 (395)
T ss_pred EEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCC
Confidence 99999999999999999999999999999998763210 00 1000
Q ss_pred ---HHHHHH---HHHhCCeEEEEEeccccC-----------CCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCC
Q 036756 196 ---RVIEMQ---AAVHQCSATLDFMEEKLR-----------PYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGA 256 (321)
Q Consensus 196 ---~~i~~~---~~~~~~~~~~~~~~~~~~-----------~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 256 (321)
.+.+.+ .+..+..+++++.....+ .+|+ ...++++++++.+++++++|..+. .....++
T Consensus 265 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~ 342 (395)
T TIGR03526 265 TWEYALEQIRNLPAVQGAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFS 342 (395)
T ss_pred CHHHHHHHHHHHHHhcCCcceEEEeccccccccccccccccccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeee
Confidence 022222 222333444443110000 1333 345678999999999998776553 2234566
Q ss_pred CcHH-HHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 257 EDFS-FYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 257 ~D~~-~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
+|.+ +++. .+|++.| |+ |...++|++|||+++++|..++++|++++..+|
T Consensus 343 ~~~~~~~~~~g~p~v~~--Gp-----g~~~~aH~~dE~i~i~~l~~~~~~~~~~~~~~~ 394 (395)
T TIGR03526 343 TNGVSIMGRHGIPVIGF--GP-----GDEDQAHAPNEKTWKEDLVKAAAMYAAIPTVYL 394 (395)
T ss_pred cccceehhhcCCCEEEE--CC-----cchhhccCCCceEEHHHHHHHHHHHHHHHHHhc
Confidence 7774 4444 4898865 54 334679999999999999999999999999987
No 25
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.6e-39 Score=298.98 Aligned_cols=284 Identities=18% Similarity=0.189 Sum_probs=209.5
Q ss_pred ChHHHHHHHHhCCCceecc-----CCCceEEEEecCCCCCEEEEEeccccCCCCC--CCCCCccc-cCCCceecCC---c
Q 036756 1 AGQLVRNELASLGIEYTWP-----FAKTGIVASVGSGVQPWFGLRADMDALPIQE--MVEWEHKS-KNNGKMHACG---H 69 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~-----~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~--~~~~pf~~-~~~G~~~g~g---~ 69 (321)
+++||+++|+++|++++.. .+++|++++++++ .++|+|+|||||||.++ |+.+||+. +++|++|||| |
T Consensus 34 ~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~ 112 (383)
T PRK05111 34 VIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADM 112 (383)
T ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccc
Confidence 3789999999999987642 1467999999533 36899999999999864 35669985 5789999865 8
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccce
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGS 148 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~ 148 (321)
||+++++|.|++.|++. .++++|.|+|++|||++ .|++++++++.+ +.|++|+.++ ++.. . ...++|.
T Consensus 113 Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~ep-----~~~~-~--~~~~~G~ 181 (383)
T PRK05111 113 KGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAI-RPDCAIIGEP-----TSLK-P--VRAHKGH 181 (383)
T ss_pred cHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCC-CCCEEEEcCC-----CCCc-e--eecccce
Confidence 99999999999999864 46789999999999987 599999998765 4688888654 3321 1 1245799
Q ss_pred eEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc----ccCC-------Cc------hHH---------------
Q 036756 149 MRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVS----RETD-------PL------EAR--------------- 196 (321)
Q Consensus 149 ~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~----~~~~-------p~------~~~--------------- 196 (321)
.+++|+++|+++|+|.|+.|.|||..+++++.+|+.+.. +..+ |. .+.
T Consensus 182 ~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~NvVP~~~~~~~d 261 (383)
T PRK05111 182 MSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFTVPYPTLNLGHIHGGDAPNRICGCCELHFD 261 (383)
T ss_pred EEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCCCCCCceeEeeeecCCcCcccCCceEEEEE
Confidence 999999999999999999999999999999999987631 1000 00 000
Q ss_pred ------------------HHHHHHHHhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCC
Q 036756 197 ------------------VIEMQAAVHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGA 256 (321)
Q Consensus 197 ------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 256 (321)
.++.+++.++++++++.. ...+|+. ..++++++.+++++ |..+ ....++
T Consensus 262 iR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~----g~~~----~~~~~~ 330 (383)
T PRK05111 262 IRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL---HPPIPGYECPADHQLVRVVEKLL----GHKA----EVVNYC 330 (383)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc---ccCCCCcCCCCCCHHHHHHHHHh----CCCC----ceeeee
Confidence 222222345666666531 1233433 34567777776543 4432 123567
Q ss_pred CcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 257 EDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 257 ~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+|+.++... +|++++++| ....+|++||++++++|.+++++|++++.+|+.
T Consensus 331 ~Da~~~~~~g~p~v~~G~g-------~~~~~H~~~E~v~~~~l~~~~~i~~~~~~~~~~ 382 (383)
T PRK05111 331 TEAPFIQQLGCPTLVLGPG-------SIEQAHQPDEYLELSFIKPTRELLRQLIHHFCL 382 (383)
T ss_pred ccHHHHHhcCCCEEEECCC-------chHhCcCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 999998765 898875433 235799999999999999999999999999863
No 26
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.2e-39 Score=300.70 Aligned_cols=285 Identities=18% Similarity=0.205 Sum_probs=210.4
Q ss_pred ChHHHHHHHHhCCCceecc----CCCceEEEEecCCCCCEEEEEeccccCCCCC--CCCCCcccc-CCCceecCC---ch
Q 036756 1 AGQLVRNELASLGIEYTWP----FAKTGIVASVGSGVQPWFGLRADMDALPIQE--MVEWEHKSK-NNGKMHACG---HD 70 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~----~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~--~~~~pf~~~-~~G~~~g~g---~k 70 (321)
+++||+++|+++|+++++. .+++||+++++++.+|+|+|+|||||||+++ |+..||+.. +||++|||| ||
T Consensus 27 ~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~K 106 (385)
T PRK07522 27 LIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMK 106 (385)
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccc
Confidence 4789999999999997642 2358999999755468999999999999864 345589864 689999866 79
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCC--CCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 71 VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGA--LEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
|+++++|.|+++|++. .++++|.|+|++|||.+ .|++++++... ..++|++|..++ ++. .+. ..++|
T Consensus 107 g~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ep-----~~~-~~~--~~~~G 176 (385)
T PRK07522 107 GFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVGEP-----TSM-RPV--VGHKG 176 (385)
T ss_pred hHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEEEccC-----CCC-eee--eeecc
Confidence 9999999999999875 46889999999999976 59999987532 124688887543 331 111 23579
Q ss_pred eeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc----------------CC-------------CchHH--
Q 036756 148 SMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE----------------TD-------------PLEAR-- 196 (321)
Q Consensus 148 ~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~----------------~~-------------p~~~~-- 196 (321)
..+++|+++|+++|+|.|+.|.||+..+++++.+|+++..+. .+ |....
T Consensus 177 ~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~ 256 (385)
T PRK07522 177 KAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYSTLQTGTIQGGTALNIVPAECEFD 256 (385)
T ss_pred eEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcceeEEeeeecCccccccCCceEEE
Confidence 999999999999999999999999999999999998763110 00 00000
Q ss_pred -------------H---HHHHH----------HHhCCeEEEEEeccccCCCCCccC--CHHHHHHHHHHHHhhcCCccee
Q 036756 197 -------------V---IEMQA----------AVHQCSATLDFMEEKLRPYPATVN--DEEMYEHAKKVGTSLLGEANVH 248 (321)
Q Consensus 197 -------------~---i~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~g~~~~~ 248 (321)
+ ++... ...+++++++. ...+|++.. ++++++.+++++.+ ..
T Consensus 257 ~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~----~~-- 326 (385)
T PRK07522 257 FEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP----LSAYPGLDTAEDAAAARLVRALTGD----ND-- 326 (385)
T ss_pred EEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe----ccCCCCCCCCCCcHHHHHHHHHhCC----CC--
Confidence 1 22211 12456666665 345666654 36788887765433 22
Q ss_pred ccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 249 LLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 249 ~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
.....+++|+++|... +|++.+ |+ |....+|++||++++++|.+++++|..++.++.
T Consensus 327 -~~~~~~~td~~~~~~~gip~v~~--Gp-----g~~~~~H~~~E~i~i~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 327 -LRKVAYGTEAGLFQRAGIPTVVC--GP-----GSIEQAHKPDEFVELAQLAACEAFLRRLLASLA 384 (385)
T ss_pred -cceEeeecchHHhccCCCCEEEE--CC-----CChhhCCCCCccccHHHHHHHHHHHHHHHHHHh
Confidence 1224568999999863 898765 53 334589999999999999999999999998764
No 27
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=7.1e-39 Score=300.66 Aligned_cols=292 Identities=15% Similarity=0.087 Sum_probs=218.5
Q ss_pred ChHHHHHHHHhCCCceecc--------------------CCCceEEEEecCC--CCCEEEEEeccccCCCCC---CCCCC
Q 036756 1 AGQLVRNELASLGIEYTWP--------------------FAKTGIVASVGSG--VQPWFGLRADMDALPIQE---MVEWE 55 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--------------------~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~---~~~~p 55 (321)
+++||+++|+++|+++++. .+++||++++++. ++|+|+|+|||||||+++ |+..|
T Consensus 42 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~P 121 (427)
T PRK06837 42 CQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPP 121 (427)
T ss_pred HHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEecCCCCCCCeEEEEeecccCCCCCccccccCC
Confidence 4789999999999987531 2468999999653 368999999999999874 45559
Q ss_pred ccc-cCCCceecCC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCC
Q 036756 56 HKS-KNNGKMHACG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAP 130 (321)
Q Consensus 56 f~~-~~~G~~~g~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~ 130 (321)
|.. +++|++|||| |||+++++|.|++.|++.+..++++|.|+|++|||.+ .|+..++..+. ..|++|+.++
T Consensus 122 f~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~ep-- 197 (427)
T PRK06837 122 FDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVIEEESTGNGALSTLQRGY--RADACLIPEP-- 197 (427)
T ss_pred CCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEcCC--
Confidence 976 4689999965 6899999999999999877778999999999999976 58888887764 4799988654
Q ss_pred CCCceeEEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc------------------cCC-
Q 036756 131 ELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR------------------ETD- 191 (321)
Q Consensus 131 ~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~------------------~~~- 191 (321)
++.. +. ..++|..+++++++|+++|||.|+.|.|||..+++++.+|+.+... ..+
T Consensus 198 ---~~~~-i~--~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni 271 (427)
T PRK06837 198 ---TGEK-LV--RAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNV 271 (427)
T ss_pred ---CCCc-cc--cccceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEee
Confidence 3321 22 2357999999999999999999999999999999999999876321 000
Q ss_pred ------------Cch--------------HH-HHH---HHHHHh--------CCeEEEEEeccccCCCCCc--cCCHHHH
Q 036756 192 ------------PLE--------------AR-VIE---MQAAVH--------QCSATLDFMEEKLRPYPAT--VNDEEMY 231 (321)
Q Consensus 192 ------------p~~--------------~~-~i~---~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~~l~ 231 (321)
|.. .. +.+ ...+.. +..+++++. ...++++ ..+.+++
T Consensus 272 ~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~ 348 (427)
T PRK06837 272 GIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWS---GFLAEGYVLEPGSEAE 348 (427)
T ss_pred eeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEE---ecccCCcCCCCCCHHH
Confidence 100 00 112 211111 222444431 1123333 3456899
Q ss_pred HHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH--HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 232 EHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ--KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 232 ~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~--~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
+.+++++++.+|.... +..+.+++|++++.. .+|++.| |++. ..+|++||+++++++.+++++|.+++
T Consensus 349 ~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~~--Gp~~------~~~H~~nE~i~i~~l~~~~~~~~~~l 418 (427)
T PRK06837 349 AALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALCY--GPSG------EGIHGFDERVDLESVRKVTKTIALFV 418 (427)
T ss_pred HHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEEE--CCCC------CccCCCCceEEHHHHHHHHHHHHHHH
Confidence 9999999997787543 345788999999984 5998864 5422 46999999999999999999999999
Q ss_pred HHHhcc
Q 036756 310 ISYLDD 315 (321)
Q Consensus 310 ~~~~~~ 315 (321)
.+||..
T Consensus 419 ~~~~~~ 424 (427)
T PRK06837 419 AEWCGV 424 (427)
T ss_pred HHHhCC
Confidence 999853
No 28
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.3e-38 Score=291.62 Aligned_cols=278 Identities=15% Similarity=0.122 Sum_probs=208.1
Q ss_pred ChHHHHHHHHhCCCceeccC--CCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceec---CCchHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPF--AKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHA---CGHDVHTTM 75 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~--~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g---~g~kg~~aa 75 (321)
+++||.++|+++||+++... +..|+++ +++|+|+|+|||||||... .|+ .++|++|| ||||+++++
T Consensus 24 ~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~---~~~--~~~g~iyGrG~~D~Kg~~a~ 94 (347)
T PRK08652 24 IALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRA---EFF--VDGVYVYGTGACDAKGGVAA 94 (347)
T ss_pred HHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCC---CCE--EECCEEEeccchhhhHHHHH
Confidence 47899999999999987532 2456665 2358999999999999642 232 35789998 468999999
Q ss_pred HHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEE
Q 036756 76 LLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAV 154 (321)
Q Consensus 76 ~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~ 154 (321)
+|.|++.|++. .++++|.|+|++|||.+ .|+++++++. +.|++|+.+++. +.+. ..++|..+++|+
T Consensus 95 ~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~----~~i~----~~~~g~~~~~i~ 161 (347)
T PRK08652 95 ILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD----LKVA----IAHYGNLEAYVE 161 (347)
T ss_pred HHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC----Ccee----eecccEEEEEEE
Confidence 99999999854 34679999999999976 5999998762 358899877532 2222 246899999999
Q ss_pred EEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc---CCCc------hHH--------------------------H--
Q 036756 155 IEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE---TDPL------EAR--------------------------V-- 197 (321)
Q Consensus 155 v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~---~~p~------~~~--------------------------~-- 197 (321)
++|+++|++.|+.|.|||..+++++.+|+++.... .+|. .+. +
T Consensus 162 ~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~i~gg~~~nviP~~~~~~~diR~~~~~~~~~v~~ 241 (347)
T PRK08652 162 VKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFDPHIGIQEIIGGSPEYSIPALCRLRLDARIPPEVEVEDVLD 241 (347)
T ss_pred EEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccCCCCcceeeecCCCCCccCCcEEEEEEEEcCCCCCHHHHHH
Confidence 99999999999999999999999999998764221 0110 000 2
Q ss_pred -HHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH-hhheEEEecc
Q 036756 198 -IEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALFMIGT 275 (321)
Q Consensus 198 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~~G~ 275 (321)
++...+.++++++++.. .+.+ +..+++++++.+++++++. |.++. +..+.+++|+++|+.. +|++.| |+
T Consensus 242 ~i~~~~~~~~v~~~~~~~---~~~~-~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~gip~v~~--Gp 312 (347)
T PRK08652 242 EIDPILDEYTVKYEYTEI---WDGF-ELDEDEEIVQLLEKAMKEV-GLEPE--FTVMRSWTDAINFRYNGTKTVVW--GP 312 (347)
T ss_pred HHHHHHHhcCceEEEecc---CCcc-cCCCCCHHHHHHHHHHHHh-CCCCC--cCcCCccchhHHHHHCCCCEEEE--CC
Confidence 23333344555544321 1222 2456789999999999998 87653 3456788999999775 999865 54
Q ss_pred cCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 276 RNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 276 ~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
|....+|++|||+++++|.+++++|.+++.+++.
T Consensus 313 -----g~~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 313 -----GELDLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred -----CchhhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 3346899999999999999999999999999875
No 29
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=5.5e-38 Score=294.13 Aligned_cols=296 Identities=15% Similarity=0.135 Sum_probs=217.4
Q ss_pred ChHHHHHHHHhCCCceecc---CCCceEEEEecCC-C--CCEEEEEeccccCCCCCCCCC---Cccc-cCCCceecCC--
Q 036756 1 AGQLVRNELASLGIEYTWP---FAKTGIVASVGSG-V--QPWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHACG-- 68 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~---~~~~nvia~~~~~-~--~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~g-- 68 (321)
+++||+++|+++||+++.. .+++|+++++++. + +|+|+|+|||||||+++...| ||.. +++|++||||
T Consensus 38 ~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~ 117 (421)
T PRK08596 38 AQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAA 117 (421)
T ss_pred HHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEecccc
Confidence 3789999999999988652 3578999999653 2 368999999999998765445 8875 4789999976
Q ss_pred -chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccccc
Q 036756 69 -HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLA 146 (321)
Q Consensus 69 -~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~ 146 (321)
||++++++|.|+++|++.+..++++|.|+|++|||.+ .|++++++++. .+|++|+.+++ +.. . ..++
T Consensus 118 D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep~-----~~~-~---~~~~ 186 (421)
T PRK08596 118 DMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCCERGY--DADFAVVVDTS-----DLH-M---QGQG 186 (421)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHHhcCC--CCCEEEECCCC-----CCc-c---cccc
Confidence 5999999999999999887788999999999999987 59999999874 47999997653 221 1 1346
Q ss_pred ceeEEEEEEEec----------CCCCCCCCCCCCHHHHHHHHHHHHHHhhcc---------------cCCCc--hHH---
Q 036756 147 GSMRFLAVIEGK----------GGHAAMPHATRDPVLAASFAILALQQIVSR---------------ETDPL--EAR--- 196 (321)
Q Consensus 147 g~~~~~i~v~G~----------~aHss~p~~g~nAi~~~~~~i~~l~~~~~~---------------~~~p~--~~~--- 196 (321)
|...++++++|+ .+|++.|+.|.|||..++++|.+|+.+... ..++. .+.
T Consensus 187 G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~ 266 (421)
T PRK08596 187 GVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHA 266 (421)
T ss_pred ceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCC
Confidence 777778888776 379999999999999999999999876310 00110 000
Q ss_pred -----------------------HHHHHHH---Hh---C-----CeEEEEEecc-----ccCCCCCc--cCCHHHHHHHH
Q 036756 197 -----------------------VIEMQAA---VH---Q-----CSATLDFMEE-----KLRPYPAT--VNDEEMYEHAK 235 (321)
Q Consensus 197 -----------------------~i~~~~~---~~---~-----~~~~~~~~~~-----~~~~~~~~--~~~~~l~~~~~ 235 (321)
+.+.+.+ .. . ..+++++.+. ....+|++ ..++++++.+.
T Consensus 267 nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 346 (421)
T PRK08596 267 AFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLS 346 (421)
T ss_pred CccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccccCCCccCCCCchHHHHHH
Confidence 2222221 11 0 0112222100 01123443 44678999999
Q ss_pred HHHHhhcCCcceeccCCCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 236 KVGTSLLGEANVHLLPMAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 236 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+++++++|.++. +....+++|++++.. .+|++.+ |+ |....+|++||+++++++.+++++|.+++.+||.
T Consensus 347 ~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~~--Gp-----g~~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~ 417 (421)
T PRK08596 347 SAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVIY--GP-----GTLEEAHSVNEKVEIEQLIEYTKVITAFIYEWCH 417 (421)
T ss_pred HHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEEE--CC-----CcccccCCCCceEEHHHHHHHHHHHHHHHHHHhC
Confidence 999998787643 344568899999986 4998865 53 2236799999999999999999999999999996
Q ss_pred cc
Q 036756 315 DH 316 (321)
Q Consensus 315 ~~ 316 (321)
.+
T Consensus 418 ~~ 419 (421)
T PRK08596 418 TK 419 (421)
T ss_pred CC
Confidence 54
No 30
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=7e-38 Score=297.49 Aligned_cols=301 Identities=15% Similarity=0.122 Sum_probs=216.8
Q ss_pred ChHHHHHHHHhCCCcee---cc---CCCceEEEEecCC-CCCEEEEEeccccCCCCC--CCCCCccc-cCCCceecC---
Q 036756 1 AGQLVRNELASLGIEYT---WP---FAKTGIVASVGSG-VQPWFGLRADMDALPIQE--MVEWEHKS-KNNGKMHAC--- 67 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~---~~---~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~--~~~~pf~~-~~~G~~~g~--- 67 (321)
+++||.++|+++|++++ .. .+++||++++++. ++|+|+|+|||||||+++ |+..||.. ++||++|||
T Consensus 61 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~ 140 (472)
T PRK09133 61 AAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTS 140 (472)
T ss_pred HHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcc
Confidence 46899999999999753 21 2468999999653 458999999999999853 45568976 468999986
Q ss_pred CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-cc-chhhhHHHcCC-CCCcceEEEeccCC------CCCceeEE
Q 036756 68 GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEE-SY-GGAYHMIKEGA-LEKFQGIFGLHVAP------ELPTGTIG 138 (321)
Q Consensus 68 g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~g-~G~~~l~~~g~-~~~~d~~i~~~~~~------~~p~g~~~ 138 (321)
||||+++++|.|++.|++.+..++++|.|+|++||| ++ .|+++++++.. ..+.|++|+ +++. ++|+.. .
T Consensus 141 D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~~~~~~~~~gept~~-~ 218 (472)
T PRK09133 141 DDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EGGGGTLDEDGKPVLL-T 218 (472)
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CCCccccCCCCCceEE-E
Confidence 579999999999999998777789999999999999 55 59999987643 114688888 7643 344432 1
Q ss_pred eeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc------------------------------
Q 036756 139 SRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR------------------------------ 188 (321)
Q Consensus 139 ~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~------------------------------ 188 (321)
+ ...++|..+++|+++|+++|||.|+ +.|||..++++|.+|+++..+
T Consensus 219 i--~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (472)
T PRK09133 219 V--QAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFA 295 (472)
T ss_pred e--eeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHh
Confidence 2 2356899999999999999999997 589999999999998753100
Q ss_pred ------------------------cCC-------------CchHH---------------HHHHHHHHh-CCeEEEEEec
Q 036756 189 ------------------------ETD-------------PLEAR---------------VIEMQAAVH-QCSATLDFME 215 (321)
Q Consensus 189 ------------------------~~~-------------p~~~~---------------~i~~~~~~~-~~~~~~~~~~ 215 (321)
..+ |.... +.+.+.+.. ...+++++..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~~~v~v~~~~ 375 (472)
T PRK09133 296 ANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVADPAIKITRIG 375 (472)
T ss_pred cCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcCCCEEEEEcc
Confidence 000 00000 233333221 2234444311
Q ss_pred cccCCCCCccCCHHHHHHHHHHHHhhc-CCcceeccCCCcCCCcHHHHHHH-hhheEEE--ecccCCCCCCCCCCCCCCC
Q 036756 216 EKLRPYPATVNDEEMYEHAKKVGTSLL-GEANVHLLPMAMGAEDFSFYSQK-MAAALFM--IGTRNETLKPVVRLHSPYL 291 (321)
Q Consensus 216 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~--~G~~~~~~g~~~~~H~~~E 291 (321)
. ....++...+.++++.++++.++++ |... .+..+.+++|++++... +|++.++ +|+ +....+|++||
T Consensus 376 ~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ggtDa~~~~~~gip~~~~~~i~gp-----~~~~~aH~~dE 447 (472)
T PRK09133 376 D-PSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMSTGATDGRYLRAAGIPTYGVSGLFGD-----PDDTFAHGLNE 447 (472)
T ss_pred C-CCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccccccchHHHHhcCCCceeecCcccC-----cccccCCCCCC
Confidence 1 1112344556789999999998876 4332 13457789999999864 8886321 232 33467999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHhc
Q 036756 292 VIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 292 ~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
|+++++|.+++++|.+++.+|++
T Consensus 448 ~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 448 RIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred ceeHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999864
No 31
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.7e-38 Score=292.40 Aligned_cols=284 Identities=17% Similarity=0.148 Sum_probs=212.5
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC-C-CCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG-V-QPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||+++|+++|++++.+ .+.|+++++++. + +|+|+|+|||||||.+ |. .|||++++++|+
T Consensus 42 ~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~g------------g~---~D~k~Gv~a~l~ 105 (414)
T PRK12891 42 ARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQPTG------------GR---YDGIYGVLGGLE 105 (414)
T ss_pred HHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCCCC------------cc---ccchhhHHHHHH
Confidence 4789999999999999875 467999999764 3 4899999999999963 21 489999999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcc------chhhhH------------------------HHcCCC-------CCcc
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHM------------------------IKEGAL-------EKFQ 121 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l------------------------~~~g~~-------~~~d 121 (321)
|+++|++.+..++++|.|++++|||++ .|++.+ .+.|+. ++.+
T Consensus 106 a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (414)
T PRK12891 106 VVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVGGYPVH 185 (414)
T ss_pred HHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccccccCCCC
Confidence 999999988889999999999999985 266533 344431 1224
Q ss_pred eEEEeccCCC---CCce-eEEeeccccccceeEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCC----
Q 036756 122 GIFGLHVAPE---LPTG-TIGSRPGPMLAGSMRFLAVIEGKGGHAA-MPH-ATRDPVLAASFAILALQQIVSRETD---- 191 (321)
Q Consensus 122 ~~i~~~~~~~---~p~g-~~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~---- 191 (321)
+.+.+|.+.+ ++++ .+.+. ..++|..|++|+++|+++|+| .|+ .|+|||..+++++.+|+++..+...
T Consensus 186 ~~~e~h~e~g~vle~~~~~~~iv--~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~~~~~t~ 263 (414)
T PRK12891 186 AAYELHIEQGAILERAGKTIGVV--TAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRDAPDARA 263 (414)
T ss_pred EEEEEEeCCCHHHHHCCCcEEEE--eeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 5555665432 1222 12222 356899999999999999998 686 5899999999999999876432100
Q ss_pred ---------------CchH-----------H-----------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHH
Q 036756 192 ---------------PLEA-----------R-----------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHA 234 (321)
Q Consensus 192 ---------------p~~~-----------~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 234 (321)
|... . +++.+++.+++++++++ ...+|++.+++++++.+
T Consensus 264 ~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~lv~~l 339 (414)
T PRK12891 264 TVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ----IFGYAPAPFAPGCIDAV 339 (414)
T ss_pred EEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----EecCCCcCCCHHHHHHH
Confidence 1000 0 23333345677777776 44567788899999999
Q ss_pred HHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 235 KKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 235 ~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
++++++. |.+.. ..++.+++|+.++...+|++++|.+ +....+|++|||+++++|..++++|+.++.+|..
T Consensus 340 ~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~~gp------~~~~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~ 410 (414)
T PRK12891 340 RDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMIFVP------CVDGLSHNEAEAITPEWFAAGADVLLRAVLQSAQ 410 (414)
T ss_pred HHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEEEEc------CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 9998764 76543 2457789999998888998664433 2235789999999999999999999999999865
Q ss_pred c
Q 036756 315 D 315 (321)
Q Consensus 315 ~ 315 (321)
+
T Consensus 411 ~ 411 (414)
T PRK12891 411 E 411 (414)
T ss_pred h
Confidence 4
No 32
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=7.4e-38 Score=288.02 Aligned_cols=281 Identities=18% Similarity=0.161 Sum_probs=209.4
Q ss_pred ChHHHHHHHHhCCCceeccC------CCceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCcc-ccCCCceecC-----
Q 036756 1 AGQLVRNELASLGIEYTWPF------AKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHK-SKNNGKMHAC----- 67 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~-~~~~G~~~g~----- 67 (321)
+++||+++|+++||+++... +++|+++++++. ++|+|+|+||+||||.++ +|. .+++|++|||
T Consensus 22 ~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~----~~~~~~~~~~~~g~G~~~~ 97 (361)
T TIGR01883 22 ILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA----GPEPVVEDGIFTSLGGTIL 97 (361)
T ss_pred HHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC----CCCceecCCeEecCCCeEe
Confidence 36899999999999976532 368999999654 358999999999999753 333 2456888874
Q ss_pred --CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccc
Q 036756 68 --GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPM 144 (321)
Q Consensus 68 --g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~ 144 (321)
|||++++++|.+++.|++.+ .++++|.|+|++|||.+ .|++.+.+.+. ..++++..++.. +.+.+.. .
T Consensus 98 g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~~~~~~--~~~~i~~----~ 168 (361)
T TIGR01883 98 GADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYCLDAPG--EVGNIQL----A 168 (361)
T ss_pred eccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEEEeCCC--CcceEEe----c
Confidence 56799999999999998765 57889999999999987 49998876543 357777765422 2344432 3
Q ss_pred ccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhccc---CC-------------CchHH-----------
Q 036756 145 LAGSMRFLAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSRE---TD-------------PLEAR----------- 196 (321)
Q Consensus 145 ~~g~~~~~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~~---~~-------------p~~~~----------- 196 (321)
++|..+++++++|+++|++ .|+.|+|||..+++++.+|+...... .+ |....
T Consensus 169 ~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~i~~i~gG~~~nvVP~~~~~~~diR~~~~~ 248 (361)
T TIGR01883 169 APTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGRIDEETTANIGSFSGGVNTNIVQDEQLIVAEARSLSFR 248 (361)
T ss_pred CCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccCCCCccccccceeecCCccCccCCceEEEEEEecCCHH
Confidence 4799999999999999986 79999999999999999986532110 11 11000
Q ss_pred -----------HHHHHHHHhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHH
Q 036756 197 -----------VIEMQAAVHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYS 263 (321)
Q Consensus 197 -----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~ 263 (321)
.++..+..+++++++++ ...++++ ..++++++.+++++++. |.++. ..++++++|+++++
T Consensus 249 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tD~~~~~ 321 (361)
T TIGR01883 249 KAEAQVQTMRERFEQAAEKYGATLEEET----RLIYEGFKIHPQHPLMNIFKKAAKKI-GLKTS--EIFSGGGSDANVLN 321 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCEEEEEE----EeccccccCCCCCHHHHHHHHHHHHc-CCCcE--EEecCcccHHHHHh
Confidence 22223334677777765 2334554 45678999999999885 76553 24567899999998
Q ss_pred H-HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 264 Q-KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 264 ~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
. .+|++++++| . ..+|++||+++++++..++++|..++
T Consensus 322 ~~giP~v~~G~g-------~-~~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 322 EKGVPTVNLSAG-------Y-VHAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred hCCCceEEECCC-------c-ccCcCcceeEEHHHHHHHHHHHHHHh
Confidence 6 4999876444 2 47999999999999999999999876
No 33
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-37 Score=289.69 Aligned_cols=282 Identities=18% Similarity=0.205 Sum_probs=208.6
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC--CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG--VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||+++|+++||+++.. .+.||++++++. ++|.|+|+|||||||++. . .|+|+++|++++
T Consensus 39 ~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtVp~~g------------~---~d~k~g~aa~l~ 102 (413)
T PRK09290 39 ARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTVPNGG------------R---FDGPLGVLAGLE 102 (413)
T ss_pred HHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCCCCCC------------C---cCCHHHHHHHHH
Confidence 3789999999999998764 468999999753 358999999999999632 1 266899999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcc------chhhhHHHc------------------------CCCCCcceEEEe--
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMIKE------------------------GALEKFQGIFGL-- 126 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~~~------------------------g~~~~~d~~i~~-- 126 (321)
|+++|++.+..++++|.|+|++|||.+ .|++.+++. + + ++|++++.
T Consensus 103 a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~d~~i~~~~ 180 (413)
T PRK09290 103 AVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIG-Y-DGDEAVGAAR 180 (413)
T ss_pred HHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcC-C-Chhhcccccc
Confidence 999999887778899999999999984 377766532 2 2 34666643
Q ss_pred ccCC--------------CCCcee-EEeeccccccceeEEEEEEEecCCCCC-CC-CCCCCHHHHHHHHHHHHHHhhccc
Q 036756 127 HVAP--------------ELPTGT-IGSRPGPMLAGSMRFLAVIEGKGGHAA-MP-HATRDPVLAASFAILALQQIVSRE 189 (321)
Q Consensus 127 ~~~~--------------~~p~g~-~~~~~g~~~~g~~~~~i~v~G~~aHss-~p-~~g~nAi~~~~~~i~~l~~~~~~~ 189 (321)
+|+. .+|++. ..+. ..++|..|++|+++|+++|+| .| +.|.|||..+++++.+|+++..+.
T Consensus 181 ept~~~~~~~~~~~~~~~~e~~~~~~~i~--~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~ 258 (413)
T PRK09290 181 ARRDIKAFVELHIEQGPVLEAEGLPIGVV--TGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH 258 (413)
T ss_pred CCCCccEEEEEEeccCHHHHHCCCcEEEE--eeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc
Confidence 2211 022221 1122 357899999999999999998 68 589999999999999998764211
Q ss_pred CC-------------------CchHH----------------------HHHHHHHHhCCeEEEEEeccccCCCCCccCCH
Q 036756 190 TD-------------------PLEAR----------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDE 228 (321)
Q Consensus 190 ~~-------------------p~~~~----------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (321)
.. |.... +++..+..++++++++. ...+|++.+++
T Consensus 259 ~~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~----~~~~~~~~~d~ 334 (413)
T PRK09290 259 GPDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIEL----ISRRPPVPFDP 334 (413)
T ss_pred CCCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----EecCCCccCCH
Confidence 00 11000 22222233567777765 34567778889
Q ss_pred HHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHH
Q 036756 229 EMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAV 308 (321)
Q Consensus 229 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~ 308 (321)
++++.+++++++. |.+.. ...+.+++|+++|+..+|+++++.| +....+|++||++++++|..++++|+++
T Consensus 335 ~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~~gp------~~~~~~H~~dE~v~i~~l~~~~~v~~~~ 405 (413)
T PRK09290 335 GLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMIFVP------SVGGISHNPAEFTSPEDCAAGANVLLHA 405 (413)
T ss_pred HHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEEEec------cCCCCCCCccccCCHHHHHHHHHHHHHH
Confidence 9999999999776 75542 3457789999999878998654433 2234689999999999999999999999
Q ss_pred HHHHhcc
Q 036756 309 AISYLDD 315 (321)
Q Consensus 309 ~~~~~~~ 315 (321)
+.+|+.+
T Consensus 406 l~~l~~~ 412 (413)
T PRK09290 406 LLELAEE 412 (413)
T ss_pred HHHHhcc
Confidence 9999864
No 34
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.8e-37 Score=290.22 Aligned_cols=282 Identities=17% Similarity=0.157 Sum_probs=208.0
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGA 79 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a 79 (321)
+++||.++|+++|++++.+ ++.|+++++++. ++|+|+|+||+||||.+ |+.|| +++++++|.|
T Consensus 41 ~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~~------------g~~dg---~~Gvaa~l~a 104 (412)
T PRK12892 41 ARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNLG------------GRYDG---ALGVVAGLEA 104 (412)
T ss_pred HHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCCC------------Ccccc---hHHHHHHHHH
Confidence 4689999999999998764 467999999763 45899999999999964 33333 4789999999
Q ss_pred HHHHHhccCCCCceEEEEEecCCCcc------chhhhHHHcCC------------------------CCCcceEEEeccC
Q 036756 80 ARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMIKEGA------------------------LEKFQGIFGLHVA 129 (321)
Q Consensus 80 ~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~~~g~------------------------~~~~d~~i~~~~~ 129 (321)
++.|++.+..++++|.|++++|||++ .|+++++++.. + ..|+++..++.
T Consensus 105 ~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~d~~~~~ep~ 183 (412)
T PRK12892 105 ARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGL-AGRPRPAADRA 183 (412)
T ss_pred HHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCC-Chhhccccccc
Confidence 99999888788999999999999983 38888874210 0 12333443321
Q ss_pred -------------C-CCCcee-EEeeccccccceeEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcccCC-
Q 036756 130 -------------P-ELPTGT-IGSRPGPMLAGSMRFLAVIEGKGGHAA-MPH-ATRDPVLAASFAILALQQIVSRETD- 191 (321)
Q Consensus 130 -------------~-~~p~g~-~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~- 191 (321)
+ .+|++. ..+ ...++|..|++|+++|+++|+| .|+ .|.|||..+++++.+|+++..+...
T Consensus 184 ~~~~~~e~~~~~g~~~e~~~~~~~i--~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~~~~ 261 (412)
T PRK12892 184 RPKGYLEAHIEQGPVLEQAGLPVGV--VTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRVCGP 261 (412)
T ss_pred CccEEEEEEeccCHhHhhCCCcEEE--EEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 011221 112 2356899999999999999998 575 6899999999999999876432211
Q ss_pred ------------------CchHH----------------------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHH
Q 036756 192 ------------------PLEAR----------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMY 231 (321)
Q Consensus 192 ------------------p~~~~----------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (321)
|.... +++.++..++++++++. ...++++.++++++
T Consensus 262 ~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~----~~~~~~~~~d~~lv 337 (412)
T PRK12892 262 AVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDR----IAEYAPAPCDAALV 337 (412)
T ss_pred cEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----EecCCCcCCCHHHH
Confidence 10000 22333334678888776 34567778889999
Q ss_pred HHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 036756 232 EHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAIS 311 (321)
Q Consensus 232 ~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~ 311 (321)
+.+++++++ +|.++. ...+.+++|+++|+..+|+++++ |+. ....+|++|||+++++|.+++++|+.++.+
T Consensus 338 ~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~~-gp~-----~~~~~H~~~E~v~i~~l~~~~~il~~~l~~ 408 (412)
T PRK12892 338 DALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAMLF-VPS-----KGGISHNPAEDTSPADLAQGARVLADTLRR 408 (412)
T ss_pred HHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEEE-ecc-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998 576643 34577899999998889976543 432 235699999999999999999999999998
Q ss_pred Hhc
Q 036756 312 YLD 314 (321)
Q Consensus 312 ~~~ 314 (321)
|+.
T Consensus 409 ~~~ 411 (412)
T PRK12892 409 LAR 411 (412)
T ss_pred hcc
Confidence 864
No 35
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=295.79 Aligned_cols=304 Identities=16% Similarity=0.158 Sum_probs=212.9
Q ss_pred hHHHHHHHHhCCCceecc-CCCceEEEEecCC-CC-CEEEEEeccccCCCCCC--CCC---Cccc-cCCCceecCC---c
Q 036756 2 GQLVRNELASLGIEYTWP-FAKTGIVASVGSG-VQ-PWFGLRADMDALPIQEM--VEW---EHKS-KNNGKMHACG---H 69 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~-~~~~nvia~~~~~-~~-~~i~l~~H~DtVp~~~~--~~~---pf~~-~~~G~~~g~g---~ 69 (321)
++||.++|+++|++++.. .+..|+++.+.+. ++ |+|+|+|||||||+++. ..| ||.. ++||++|||| |
T Consensus 76 ~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~ 155 (486)
T PRK08262 76 HAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDD 155 (486)
T ss_pred HHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCcccc
Confidence 567777777789876542 2336888887543 34 89999999999998643 235 8986 4789999987 8
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHc----CCCCCcceEE------Eecc--CCCCCcee
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKE----GALEKFQGIF------GLHV--APELPTGT 136 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~----g~~~~~d~~i------~~~~--~~~~p~g~ 136 (321)
||+++++|.|++.|++.+..++++|.|+|++|||++ .|++++++. +. ++|+++ ..++ +..+|++.
T Consensus 156 Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~~~~~--~~~~~~~~~~~i~~~~~~~~~~p~~~ 233 (486)
T PRK08262 156 KGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLKERGV--RLAFVLDEGGAITEGVLPGVKKPVAL 233 (486)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHHHhcC--CEEEEEeCCceecccccCCCCceEEe
Confidence 999999999999999887778999999999999987 489888763 22 344443 2221 12345554
Q ss_pred EEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc----------------------------
Q 036756 137 IGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR---------------------------- 188 (321)
Q Consensus 137 ~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~---------------------------- 188 (321)
+. .+++|..+++|+++|+++|||.|+. .|||..++++|.+|+.+..+
T Consensus 234 i~----~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (486)
T PRK08262 234 IG----VAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLAN 308 (486)
T ss_pred eE----EeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhc
Confidence 32 3468999999999999999999998 99999999999999763100
Q ss_pred ------------------------cCC-------------CchHH---------------HHHHHHHH-hCCeEEEEEec
Q 036756 189 ------------------------ETD-------------PLEAR---------------VIEMQAAV-HQCSATLDFME 215 (321)
Q Consensus 189 ------------------------~~~-------------p~~~~---------------~i~~~~~~-~~~~~~~~~~~ 215 (321)
..+ |.... +.+.+.+. ....+++++..
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~v~~~~ 388 (486)
T PRK08262 309 LWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNFRILPGDSVESVLAHVRRAVADDRVEIEVLG 388 (486)
T ss_pred ccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEEEeCCCCCHHHHHHHHHHHhccCceEEEEec
Confidence 000 00000 33333222 12234444421
Q ss_pred cccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCC
Q 036756 216 EKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDE 295 (321)
Q Consensus 216 ~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~ 295 (321)
......++..+++++++.++++++++++.... .+..+.+++|+++|....|+++.+.+. ..+||+...+|++||++++
T Consensus 389 ~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa~~~~~~~p~~~~~~~~-~~gpg~~~~~Ht~dE~i~i 466 (486)
T PRK08262 389 GNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDSRHYSGISDNVYRFSPL-RLSPEDLARFHGTNERISV 466 (486)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccHHHHHHhcCCeEEECCc-cCCcccccCCCCCCCceeH
Confidence 10111233456788999999999998664222 223467899999998877776543322 2344555689999999999
Q ss_pred CcHHHHHHHHHHHHHHHhc
Q 036756 296 DVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 296 ~~l~~~~~~~~~~~~~~~~ 314 (321)
++|.+++++|.+++.+++.
T Consensus 467 ~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 467 ANYARMIRFYYRLIENAAG 485 (486)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998864
No 36
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=3.6e-37 Score=281.83 Aligned_cols=276 Identities=16% Similarity=0.102 Sum_probs=202.1
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecC---CchHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHAC---GHDVHTTMLL 77 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~---g~kg~~aa~l 77 (321)
+++||.++|+++||+++.+ ...|+++++++ .+|+|+|+||+||||.. .||. +++|++||+ ||||+++++|
T Consensus 28 ~~~~l~~~l~~~G~~~~~~-~~~n~i~~~~~-~~~~l~~~~H~DtVp~~----~p~~-~~~g~iyGrG~~D~Kg~~aa~l 100 (348)
T PRK04443 28 AAEFLVEFMESHGREAWVD-EAGNARGPAGD-GPPLVLLLGHIDTVPGD----IPVR-VEDGVLWGRGSVDAKGPLAAFA 100 (348)
T ss_pred HHHHHHHHHHHcCCEEEEc-CCCcEEEEcCC-CCCEEEEEeeccccCCC----CCcE-eeCCeEEeecccccccHHHHHH
Confidence 4789999999999998764 34799999854 35899999999999942 3663 468999985 5899999999
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEE
Q 036756 78 GAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIE 156 (321)
Q Consensus 78 ~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~ 156 (321)
.|++.| + .+++++|.|+|++|||+++ |...++.++. ++|++|+.||+.. +.+. ..++|..+++++++
T Consensus 101 ~A~~~l-~--~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~~---~~i~----~~~kG~~~~~l~~~ 168 (348)
T PRK04443 101 AAAARL-E--ALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSGW---DGIT----LGYKGRLLVTYVAT 168 (348)
T ss_pred HHHHHh-c--ccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCCc---ccee----eecccEEEEEEEEE
Confidence 999998 3 4688999999999999874 5555555543 5799999765321 1222 24689999999999
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc------cC-----C-----------CchHH---------------HHH
Q 036756 157 GKGGHAAMPHATRDPVLAASFAILALQQIVSR------ET-----D-----------PLEAR---------------VIE 199 (321)
Q Consensus 157 G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~------~~-----~-----------p~~~~---------------~i~ 199 (321)
|+++|||.| |.|||..|++++.+|+++... .. + |.... +.+
T Consensus 169 G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~n~iP~~~~~~~d~R~~p~~~~~~i~~ 246 (348)
T PRK04443 169 SESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFDSSSDGLTVEAEMTVGLRLPPGLSPEEARE 246 (348)
T ss_pred eCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEecCCCCCCceEEEEEEEccCCCCCHHHHHH
Confidence 999999987 799999999999999875320 00 0 10000 233
Q ss_pred HHHHHhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH--HhhheEEEecc
Q 036756 200 MQAAVHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ--KMAAALFMIGT 275 (321)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~--~~p~~~~~~G~ 275 (321)
.+.+.. ..+++++ ...+|++ ..++++++.++++++++.+ .+. .....+++|+++|.+ .+|++.+ |+
T Consensus 247 ~i~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~--~~~~~g~tD~~~~~~~~gip~v~~--Gp 316 (348)
T PRK04443 247 ILDALL-PTGTVTF----TGAVPAYMVSKRTPLARAFRVAIREAGG-TPR--LKRKTGTSDMNVVAPAWGCPMVAY--GP 316 (348)
T ss_pred HHHHhC-CCcEEEE----ecCCCceecCCCCHHHHHHHHHHHHhcC-Ccc--eeccccCCcHHHHhhhcCCCEEEE--CC
Confidence 333221 1233443 2233443 3466799999999999754 332 234568999999975 4898865 54
Q ss_pred cCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 276 RNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 276 ~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
|....+|++|||+++++|.+++++|.+++.+|
T Consensus 317 -----g~~~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 317 -----GDSDLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred -----CCccccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 23457899999999999999999999998764
No 37
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.7e-37 Score=293.49 Aligned_cols=297 Identities=14% Similarity=0.040 Sum_probs=205.5
Q ss_pred hHHHHHHHHhCCCceeccCCCceEEEEecC-CCCCEEEEEeccccCCCCC-CCCCCccc-cCCCceecC---CchHHHHH
Q 036756 2 GQLVRNELASLGIEYTWPFAKTGIVASVGS-GVQPWFGLRADMDALPIQE-MVEWEHKS-KNNGKMHAC---GHDVHTTM 75 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~~~~nvia~~~~-~~~~~i~l~~H~DtVp~~~-~~~~pf~~-~~~G~~~g~---g~kg~~aa 75 (321)
++|+.++|+++||+++... |+++.+.. .++|+|+|+|||||||+++ |+..||.. ++||++||| ||||++++
T Consensus 48 ~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a 124 (466)
T TIGR01886 48 LTKFLSFAERDGFTTKNFD---NYAGHVEYGAGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLA 124 (466)
T ss_pred HHHHHHHHHHCCCeEEEec---CCceeEEecCCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHH
Confidence 4688899999999987532 44444322 2358999999999999864 45569986 478999985 57999999
Q ss_pred HHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCC----CCCce-eEE-----------
Q 036756 76 LLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAP----ELPTG-TIG----------- 138 (321)
Q Consensus 76 ~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~----~~p~g-~~~----------- 138 (321)
+|.|+++|++.+..++++|.|+|++|||++ .|++++++++. .+|++++.+... +++.. .+.
T Consensus 125 ~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~ 202 (466)
T TIGR01886 125 AYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHEE--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDY 202 (466)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcCc--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCce
Confidence 999999999988888999999999999998 49999998765 357654432110 01111 000
Q ss_pred --------------------eecc-------------cccccee---------EEEEEEEecCCCCCCCCCCCCHHHHHH
Q 036756 139 --------------------SRPG-------------PMLAGSM---------RFLAVIEGKGGHAAMPHATRDPVLAAS 176 (321)
Q Consensus 139 --------------------~~~g-------------~~~~g~~---------~~~i~v~G~~aHss~p~~g~nAi~~~~ 176 (321)
...+ ..++|.. |++|+++|+++|||.|+.|+|||..|+
T Consensus 203 ~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~ 282 (466)
T TIGR01886 203 VLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLA 282 (466)
T ss_pred eEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHH
Confidence 0000 1234433 799999999999999999999999999
Q ss_pred HHHHHH----------HHhhc----c---------cCCCc--------------h-H-H-----------------HHHH
Q 036756 177 FAILAL----------QQIVS----R---------ETDPL--------------E-A-R-----------------VIEM 200 (321)
Q Consensus 177 ~~i~~l----------~~~~~----~---------~~~p~--------------~-~-~-----------------~i~~ 200 (321)
++|.++ +.+.. . ..++. . . . +.+.
T Consensus 283 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~S~nvgvI~gG~~~~~~~l~iD~R~~Pge~~eev~~e 362 (466)
T TIGR01886 283 LFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDELMGDLAMNAGMFDFDHANKESKLLLNFRYPQGTSPETMQKQ 362 (466)
T ss_pred HHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCcccccCcCceEEEeEEEEEecCCceEEEEEEEecCCCCCHHHHHHH
Confidence 988872 22210 0 00110 0 0 0 3344
Q ss_pred HHHHhCCeEEEEEeccccCCCCC-ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCC
Q 036756 201 QAAVHQCSATLDFMEEKLRPYPA-TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNET 279 (321)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~ 279 (321)
+.+..+..+++++.. ....|. ...++++++.+.+++++++|.+.. ...+.++||+++|...+|...+ |
T Consensus 363 I~~~i~~~~~v~~~~--~~~~P~~~~~ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv~--g----- 431 (466)
T TIGR01886 363 VLDKFGGIVDVTYNG--HFEEPHYVPGSDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGAM--F----- 431 (466)
T ss_pred HHHHHhcccEEEEec--ccCCCcccCCCCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhcccccccccc--c-----
Confidence 443322223444311 011222 234568999999999998776543 2357889999999865665443 3
Q ss_pred CCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 280 LKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 280 ~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
||...++|++||||++++|.+++++|.+++.+|+.
T Consensus 432 PG~~~~aH~~dE~V~i~el~~a~~iy~~~i~~l~~ 466 (466)
T TIGR01886 432 EGGPDVMHQANEFMMLDDLILAAAIYAEAIYELAK 466 (466)
T ss_pred CCCCCCccCCCcceEHHHHHHHHHHHHHHHHHHhC
Confidence 34457899999999999999999999999999873
No 38
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=286.45 Aligned_cols=300 Identities=17% Similarity=0.184 Sum_probs=210.8
Q ss_pred ChHHHHHHHHhCCCceecc---CCCceEEEEecCC-C-CCEEEEEeccccCCCCC--CCCCCccc-cCCCceecCC---c
Q 036756 1 AGQLVRNELASLGIEYTWP---FAKTGIVASVGSG-V-QPWFGLRADMDALPIQE--MVEWEHKS-KNNGKMHACG---H 69 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~---~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~--~~~~pf~~-~~~G~~~g~g---~ 69 (321)
+++||.++|+++|++++.. .+++|+++++++. + .|+|+|+||+||||.++ |+..||.. ++||++|||| |
T Consensus 27 ~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~ 106 (426)
T PRK07906 27 AAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDM 106 (426)
T ss_pred HHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCcccc
Confidence 4689999999999998753 2568999999653 3 48999999999999854 34458875 4689999965 7
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCC--CCCcceEEEeccCC---CCCc--eeEEee
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGA--LEKFQGIFGLHVAP---ELPT--GTIGSR 140 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~--~~~~d~~i~~~~~~---~~p~--g~~~~~ 140 (321)
|++++++|+|+++|++.+..++++|.|+|++|||++ .|++.+++... +...++++ .+++. ..+. ....+
T Consensus 107 Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~~~ii-~e~~~~~~~~~~~~~~~~i- 184 (426)
T PRK07906 107 KDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGVTEAI-SEVGGFSLTVPGRDRLYLI- 184 (426)
T ss_pred chHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccchheEE-ECCCceeeccCCCccEEEE-
Confidence 999999999999999887788999999999999986 38999987532 22233343 34321 0111 11112
Q ss_pred ccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc--------------------------------
Q 036756 141 PGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR-------------------------------- 188 (321)
Q Consensus 141 ~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~-------------------------------- 188 (321)
...++|..+++|+++|+++|||+|+. .|||..++++|.+|+++..+
T Consensus 185 -~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (426)
T PRK07906 185 -ETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLA 262 (426)
T ss_pred -EeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHH
Confidence 23568999999999999999999974 99999999999998643100
Q ss_pred ---------------cCCCc--hHH-------------------------HHHHHHHHhCCeEEEEEeccccCCCCC--c
Q 036756 189 ---------------ETDPL--EAR-------------------------VIEMQAAVHQCSATLDFMEEKLRPYPA--T 224 (321)
Q Consensus 189 ---------------~~~p~--~~~-------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~--~ 224 (321)
..++. .+. +.+.+.+..+..+++++. ..+++ .
T Consensus 263 ~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~~~i~~~i~~~~~~~v~~~~~----~~~~~~~~ 338 (426)
T PRK07906 263 KLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGREEEFLATVDELLGPDVEREWV----HRDPALET 338 (426)
T ss_pred HHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCcHHHHHHHHHHhCCCeEEEEe----cCCCCCCC
Confidence 00110 000 334444433444566552 22333 3
Q ss_pred cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCC--CCCCCCCCCcCCCCcHHHH
Q 036756 225 VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKP--VVRLHSPYLVIDEDVLPIG 301 (321)
Q Consensus 225 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~--~~~~H~~~E~v~~~~l~~~ 301 (321)
..++++++.++++++++.+.... ......+++|+++|... +|++.| |+.....|. ..++|++|||+++++|.++
T Consensus 339 ~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~~--gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~ 415 (426)
T PRK07906 339 PFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYGF--APLRLPPDLDFAALFHGVDERVPVDALRFG 415 (426)
T ss_pred CCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEEE--eccccCccccccccCcCCCCceeHHHHHHH
Confidence 45678999999999987432111 12345678999999874 787654 432210010 2579999999999999999
Q ss_pred HHHHHHHHHH
Q 036756 302 AALHAAVAIS 311 (321)
Q Consensus 302 ~~~~~~~~~~ 311 (321)
+++|.+++.+
T Consensus 416 ~~~~~~~l~~ 425 (426)
T PRK07906 416 VRVLDRFLRT 425 (426)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 39
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=290.80 Aligned_cols=295 Identities=17% Similarity=0.135 Sum_probs=210.0
Q ss_pred ChHHHHHHHHhCCCc-eecc--CCCceEEEEecCC-CCCEEEEEeccccCCCCC---CCCCCccc-cCCCceecC---Cc
Q 036756 1 AGQLVRNELASLGIE-YTWP--FAKTGIVASVGSG-VQPWFGLRADMDALPIQE---MVEWEHKS-KNNGKMHAC---GH 69 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~-~~~~--~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~---~~~~pf~~-~~~G~~~g~---g~ 69 (321)
+++||+++|+++||+ ++.. .+++||++++.++ ++|+|+|+||+||||+++ |+..||.. +++|++||| ||
T Consensus 42 ~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~Dm 121 (456)
T PRK08201 42 AAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDD 121 (456)
T ss_pred HHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccC
Confidence 368999999999997 4332 3567999988543 468999999999999865 34558975 568999985 58
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCC--CCCcceEEEeccCCCCCce-eEEeeccccc
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGA--LEKFQGIFGLHVAPELPTG-TIGSRPGPML 145 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~--~~~~d~~i~~~~~~~~p~g-~~~~~~g~~~ 145 (321)
||+++++|.|++.|++.+..++++|.|+|++|||.+ .|+..++++.. + ++|++|+.+++...+.. .+. .++
T Consensus 122 Kgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~~ii~e~~~~~~~~~~i~----~g~ 196 (456)
T PRK08201 122 KGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEKDKL-AADVVLISDTTLLGPGKPAIC----YGL 196 (456)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhHHhc-cCCEEEEeCCCcCCCCCEEEE----Eec
Confidence 999999999999998765677889999999999987 48888887532 3 46899998765322222 232 356
Q ss_pred cceeEEEEEEEecCC--CCCCCCC-CCCHHHHHHHHHHHHHHhhcc----------------------------------
Q 036756 146 AGSMRFLAVIEGKGG--HAAMPHA-TRDPVLAASFAILALQQIVSR---------------------------------- 188 (321)
Q Consensus 146 ~g~~~~~i~v~G~~a--Hss~p~~-g~nAi~~~~~~i~~l~~~~~~---------------------------------- 188 (321)
+|..+++|+++|+++ |||.|.. +.|||..|+++|.+|+++..+
T Consensus 197 kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (456)
T PRK08201 197 RGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRE 276 (456)
T ss_pred CCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhh
Confidence 899999999999998 9997654 579999999999998642100
Q ss_pred -----cC-------------CCc------h--------HH----------------------HHHHH---HHH---hCCe
Q 036756 189 -----ET-------------DPL------E--------AR----------------------VIEMQ---AAV---HQCS 208 (321)
Q Consensus 189 -----~~-------------~p~------~--------~~----------------------~i~~~---~~~---~~~~ 208 (321)
.. .|. . .. +.+.+ .+. .+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~~~~~~ 356 (456)
T PRK08201 277 LGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHTPAGVR 356 (456)
T ss_pred cCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 00 000 0 00 22222 222 2234
Q ss_pred EEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCC---cHHHHHH-HhhheEEEecccCCCCCC
Q 036756 209 ATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAE---DFSFYSQ-KMAAALFMIGTRNETLKP 282 (321)
Q Consensus 209 ~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~---D~~~~~~-~~p~~~~~~G~~~~~~g~ 282 (321)
++++. ...+|++ ..+.++++.+++++++++|.++.. . ..+++ |+.++.. .+|++.+++|. .
T Consensus 357 v~~~~----~~~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~--~-~~gg~~~~~~~~~~~~gip~v~~GpG~------~ 423 (456)
T PRK08201 357 VTIRR----FDKGPAFVAPIDHPAIQAAARAYEAVYGTEAAF--T-RMGGSIPVVETFSSQLHIPIVLMGFGL------P 423 (456)
T ss_pred EEEEE----CCCcCceecCCCCHHHHHHHHHHHHHhCCCcee--c-CCCCcHHHHHHHHHHhCCCEEEecCCC------C
Confidence 44433 2233443 446689999999999987876532 2 23344 5666644 48998764442 1
Q ss_pred CCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 283 VVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 283 ~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
..++|++|||+++++|.+++++|.+++.++.
T Consensus 424 ~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 424 SENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2579999999999999999999999999873
No 40
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=6.8e-37 Score=279.89 Aligned_cols=275 Identities=14% Similarity=0.079 Sum_probs=201.3
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCcc-ccCCCceecC---CchHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHK-SKNNGKMHAC---GHDVHTTML 76 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~-~~~~G~~~g~---g~kg~~aa~ 76 (321)
+++||+++|+++|++++.+. ..|++. .+ .|+|+|+||+||||. +|. .+++|++||+ ||||+++++
T Consensus 32 ~~~~l~~~l~~~g~~~~~~~-~~~~~~--~g--~~~lll~gH~DtVp~------~~~~~~~~g~iyGrG~~DmKgg~aa~ 100 (346)
T PRK00466 32 ATKFFEKISNELNLKLEILP-DSNSFI--LG--EGDILLASHVDTVPG------YIEPKIEGEVIYGRGAVDAKGPLISM 100 (346)
T ss_pred HHHHHHHHHHHcCCeEEEec-CCCcEe--cC--CCeEEEEeccccCCC------CCCceeeCCEEEecCccccchHHHHH
Confidence 47899999999999987643 457653 22 378999999999994 233 2468999985 589999999
Q ss_pred HHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEE
Q 036756 77 LGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVI 155 (321)
Q Consensus 77 l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v 155 (321)
|.|+++|++.+ .+|.|+|++|||++ .|++++++++. ++|++++.+| ++...+. ..++|..+++|++
T Consensus 101 l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~ep-----~~~~~i~--~~~kG~~~~~i~v 167 (346)
T PRK00466 101 IIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGEP-----SNGTDIV--VEYRGSIQLDIMC 167 (346)
T ss_pred HHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcCC-----CCCCceE--EEeeEEEEEEEEE
Confidence 99999998754 36999999999987 59999999874 5799998754 3321122 2468999999999
Q ss_pred EecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc----CC-------------CchH---------------HHHHHHHH
Q 036756 156 EGKGGHAAMPHATRDPVLAASFAILALQQIVSRE----TD-------------PLEA---------------RVIEMQAA 203 (321)
Q Consensus 156 ~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~----~~-------------p~~~---------------~~i~~~~~ 203 (321)
+|+++|+|.|+ .|||..|++++.+|.++.... .+ |... .+.+.+.+
T Consensus 168 ~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~~~~~~t~~~~~i~gG~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~ 245 (346)
T PRK00466 168 EGTPEHSSSAK--SNLIVDISKKIIEVYKQPENYDKPSIVPTIIRAGESYNVTPAKLYLHFDVRYAINNKRDDLISEIKD 245 (346)
T ss_pred EeeccccCCCC--cCHHHHHHHHHHHHHhccccCCCCcceeeEEecCCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHH
Confidence 99999999986 599999999999998753211 11 1000 03333333
Q ss_pred HhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCC
Q 036756 204 VHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLK 281 (321)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g 281 (321)
... .++++. ...+++. ..++++++.+.+++++. |.++. ...+.+++|+++|....|.++ .+|+ |
T Consensus 246 ~~~-~~~~~~----~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~~~g~tD~~~~~~~~~~~v-~fGp-----g 311 (346)
T PRK00466 246 KFQ-ECGLKI----VDETPPVKVSINNPVVKALMRALLKQ-NIKPR--LVRKAGTSDMNILQKITTSIA-TYGP-----G 311 (346)
T ss_pred HHh-hCcEee----ccCCCCcccCCCCHHHHHHHHHHHHh-CCCce--EEecCCcCcHHHHHHhCCCEE-EECC-----C
Confidence 221 133333 2233443 34578999999999986 76543 345678999999987644333 2464 3
Q ss_pred CCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhcc
Q 036756 282 PVVRLHSPYLVIDEDVLPIGAALHAAVAISYLDD 315 (321)
Q Consensus 282 ~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~~ 315 (321)
....+|++|||+++++|.+++++|.+++.+|+.+
T Consensus 312 ~~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~ 345 (346)
T PRK00466 312 NSMLEHTNQEKITLDEIYIAVKTYMLAIEELWQK 345 (346)
T ss_pred CcccccCCCceeeHHHHHHHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999865
No 41
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=1.3e-37 Score=294.98 Aligned_cols=296 Identities=14% Similarity=0.069 Sum_probs=204.2
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEec-CCCCCEEEEEeccccCCCCC-CCCCCccc-cCCCceecC---CchHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVG-SGVQPWFGLRADMDALPIQE-MVEWEHKS-KNNGKMHAC---GHDVHTT 74 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~-~~~~~~i~l~~H~DtVp~~~-~~~~pf~~-~~~G~~~g~---g~kg~~a 74 (321)
+++||+++|+++||+++.. .|+++++. +...|+|+|+||+||||+++ |+..||.. ++||++||| ||||+++
T Consensus 48 ~~~~l~~~~~~~G~~~~~~---~n~~~~~~~~~~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~a 124 (466)
T PRK07318 48 ALEKFLEIAERDGFKTKNV---DNYAGHIEYGEGEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTM 124 (466)
T ss_pred HHHHHHHHHHHCCCEEEEe---cCccceEEECCCCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHH
Confidence 3689999999999998753 36666553 22348999999999999864 34558975 468999985 5899999
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCC----Ccce---EEEeccC-----------------
Q 036756 75 MLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALE----KFQG---IFGLHVA----------------- 129 (321)
Q Consensus 75 a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~----~~d~---~i~~~~~----------------- 129 (321)
++++|++.|++.+..++++|.|+|++|||+|+ |++++++..... .+|+ ++..|++
T Consensus 125 a~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~ 204 (466)
T PRK07318 125 AAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDY 204 (466)
T ss_pred HHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCc
Confidence 99999999998877788999999999999984 999999874211 0111 2222211
Q ss_pred ------CCCCcee------EEee---------------ccccccce-----eEEEEEEEecCCCCCCCCCCCCHHHHHHH
Q 036756 130 ------PELPTGT------IGSR---------------PGPMLAGS-----MRFLAVIEGKGGHAAMPHATRDPVLAASF 177 (321)
Q Consensus 130 ------~~~p~g~------~~~~---------------~g~~~~g~-----~~~~i~v~G~~aHss~p~~g~nAi~~~~~ 177 (321)
++.+++. ..+. ....+||. .|++|+++|+++|+|.|+.|.|||..|++
T Consensus 205 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~ 284 (466)
T PRK07318 205 VLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAK 284 (466)
T ss_pred eeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHH
Confidence 0011111 0000 00124554 47999999999999999999999999999
Q ss_pred HHHHHHH------hh---------------------ccc-----CCC-------ch-HH---------------HHH---
Q 036756 178 AILALQQ------IV---------------------SRE-----TDP-------LE-AR---------------VIE--- 199 (321)
Q Consensus 178 ~i~~l~~------~~---------------------~~~-----~~p-------~~-~~---------------~i~--- 199 (321)
+|.+|+. +. ... .++ .. .. +.+
T Consensus 285 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~gg~~~~~~~~iDiR~~p~~~~~~v~~~i~ 364 (466)
T PRK07318 285 FLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFSFDEEKGGTLGLNFRYPVGTDFEKIKAKLE 364 (466)
T ss_pred HHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEEEecCcEEEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999863 10 000 011 00 00 222
Q ss_pred HHHHHhCCeEEEEEeccccCCCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccC
Q 036756 200 MQAAVHQCSATLDFMEEKLRPYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRN 277 (321)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~ 277 (321)
..++..+ +++++ ...+|+ ...++++++.+++++++++|.+.. ...+.+++|++++...+| +|+.
T Consensus 365 ~~~~~~~--~~~~~----~~~~~p~~~~~d~~lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i~-----~Gp~- 430 (466)
T PRK07318 365 KLIGVTG--VELSE----HEHQKPHYVPKDDPLVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGVA-----FGAM- 430 (466)
T ss_pred HHHHhcC--eEEEE----ccCCCceeeCCCCHHHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeEE-----eCCC-
Confidence 2333333 45544 233444 345778999999999987676543 234678899999865443 2322
Q ss_pred CCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 278 ETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 278 ~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
.||+..++|++|||+++++|.+++++|.+++.+|++
T Consensus 431 -~pg~~~~aH~~dE~v~i~~l~~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 431 -FPGSEDTMHQANEYIEIDDLIKAAAIYAEAIYELAK 466 (466)
T ss_pred -CCCCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHhC
Confidence 134456799999999999999999999999999863
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=283.78 Aligned_cols=300 Identities=23% Similarity=0.280 Sum_probs=216.0
Q ss_pred ChHHHHHHHHhCCCceeccC-C----CceEEEEecCCCC-CEEEEEeccccCCCCCCCCC---Cccc-cCCCceecC---
Q 036756 1 AGQLVRNELASLGIEYTWPF-A----KTGIVASVGSGVQ-PWFGLRADMDALPIQEMVEW---EHKS-KNNGKMHAC--- 67 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~-~----~~nvia~~~~~~~-~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G~~~g~--- 67 (321)
+++||+++|+++|+.++.+. + .+|++++++++.+ |.|+|+||+||||+++...| ||.. ++||++|||
T Consensus 36 ~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~ 115 (409)
T COG0624 36 AAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAA 115 (409)
T ss_pred HHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCcc
Confidence 46899999999999876532 2 4599999987643 99999999999999875445 8875 467999985
Q ss_pred CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCC---CCCcceEEEeccCCCCCceeEEeeccc
Q 036756 68 GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGA---LEKFQGIFGLHVAPELPTGTIGSRPGP 143 (321)
Q Consensus 68 g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~---~~~~d~~i~~~~~~~~p~g~~~~~~g~ 143 (321)
||||+++++++|++.|.+.+..++++|.++|++|||+++ |+..+++.+. ..++|++|..++....+.+...+.
T Consensus 116 D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~~~~~~~~~~~~~--- 192 (409)
T COG0624 116 DMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEPTLESEGGDIIVV--- 192 (409)
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCCCEEEeCCCCCcccCCCeEEE---
Confidence 579999999999999998777889999999999999984 7777777653 135799998876211122332222
Q ss_pred cccceeEEEEEEEecCCCCCC--CCCCCC----HHHHHHHHHHHHHHhhcccCC-------------Cch-------HH-
Q 036756 144 MLAGSMRFLAVIEGKGGHAAM--PHATRD----PVLAASFAILALQQIVSRETD-------------PLE-------AR- 196 (321)
Q Consensus 144 ~~~g~~~~~i~v~G~~aHss~--p~~g~n----Ai~~~~~~i~~l~~~~~~~~~-------------p~~-------~~- 196 (321)
.++|..+++++++|+++|+|. |+.|.| |+..+++++..+..+.....+ +.. ..
T Consensus 193 ~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv 272 (409)
T COG0624 193 GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDGPLGLNVGLILAGPGASVNGGDKVNV 272 (409)
T ss_pred cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccCCccccccccccCCcccccCCccCce
Confidence 468999999999999999997 899999 666666666666544321111 100 00
Q ss_pred ---------------------HHHHHHH----H---hCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCccee
Q 036756 197 ---------------------VIEMQAA----V---HQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVH 248 (321)
Q Consensus 197 ---------------------~i~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~ 248 (321)
+.+.+.+ . .+++++++. .......+...++++++.+.+++++.+|.+..
T Consensus 273 iP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~- 349 (409)
T COG0624 273 IPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEP--GLGEPPLPVPGDSPLVAALAEAAEELLGLPPE- 349 (409)
T ss_pred ecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEecc--ccCCccccCCCchHHHHHHHHHHHHhhCCCce-
Confidence 1222221 1 234444431 00122234566778999999999987677632
Q ss_pred ccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 249 LLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 249 ~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
....++++|+.+++.. +|++. +|+ |..+.+|++|||+++++|.+++++|.+++++|+.
T Consensus 350 -~~~~G~~~da~~~~~~~~~~~~--fgp-----~~~~~~H~~~E~v~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 350 -VSTGGGTHDARFFARLGIPAVI--FGP-----GDIGLAHQPNEYVELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred -ecCCCCcchHHHHHhcCCeeEE--ECC-----CCcccccCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 2334467999999876 57443 454 3347999999999999999999999999999975
No 43
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=9.4e-36 Score=278.62 Aligned_cols=282 Identities=18% Similarity=0.209 Sum_probs=205.2
Q ss_pred hHHHHHHHHhCCCceeccCCCceEEEEecCC-C-CCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHH
Q 036756 2 GQLVRNELASLGIEYTWPFAKTGIVASVGSG-V-QPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGA 79 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a 79 (321)
++||+++|+++||+++.. ...|+++++++. + +|+|+|+||+||||.+ |.. ++|++++++|.|
T Consensus 43 ~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtVp~~------------g~~---dgk~gvaa~l~a 106 (412)
T PRK12893 43 RDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQPTG------------GRF---DGALGVLAALEV 106 (412)
T ss_pred HHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCCCCC------------Ccc---cchhhHHHHHHH
Confidence 689999999999998763 357999999653 2 5899999999999963 222 447899999999
Q ss_pred HHHHHhccCCCCceEEEEEecCCCcc------chhhhHHHcCCC-------------------------------CCcce
Q 036756 80 ARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMIKEGAL-------------------------------EKFQG 122 (321)
Q Consensus 80 ~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~~~g~~-------------------------------~~~d~ 122 (321)
+++|++.+..++++|.|+|++|||++ .|++++.+.... .+.|.
T Consensus 107 ~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (412)
T PRK12893 107 VRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGYRGTARVGRRAVDA 186 (412)
T ss_pred HHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccccccCCccE
Confidence 99999887778999999999999985 277777643110 01233
Q ss_pred EEEeccCCC---CCce-eEEeeccccccceeEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccC-----C
Q 036756 123 IFGLHVAPE---LPTG-TIGSRPGPMLAGSMRFLAVIEGKGGHAAM-PH-ATRDPVLAASFAILALQQIVSRET-----D 191 (321)
Q Consensus 123 ~i~~~~~~~---~p~g-~~~~~~g~~~~g~~~~~i~v~G~~aHss~-p~-~g~nAi~~~~~~i~~l~~~~~~~~-----~ 191 (321)
.+.+|..++ ++.+ ...+ ...++|..|++|+++|+++|+|. |+ .|+|||.++++++.+|+++..+.. +
T Consensus 187 ~~~~~~~~g~~~~~~~~~~~i--~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~~~~~~~~~~ 264 (412)
T PRK12893 187 YLELHIEQGPVLEAEGLPIGV--VTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAAALAPDGVAT 264 (412)
T ss_pred EEEEEeccCHHHHHCCCcEEE--EeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 444443211 0011 1112 23578999999999999999985 85 799999999999999987643210 0
Q ss_pred --------------CchHH----------------------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHH
Q 036756 192 --------------PLEAR----------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAK 235 (321)
Q Consensus 192 --------------p~~~~----------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 235 (321)
|.... +++..+..++++++++. ...++++.+++++++.++
T Consensus 265 vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~----~~~~~~~~~d~~l~~~l~ 340 (412)
T PRK12893 265 VGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVET----VWDFPPVPFDPALVALVE 340 (412)
T ss_pred EEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----EecCCCcCCCHHHHHHHH
Confidence 10000 22222233567777765 345677888899999999
Q ss_pred HHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 236 KVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 236 ~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
+++++. |.... ...+.+++|+++|+..+|+++++ |+. ....+|++|||+++++|..++++|..++.+|+.
T Consensus 341 ~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~~-gp~-----~~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~ 410 (412)
T PRK12893 341 AAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMIF-VPC-----RGGISHNEAEDTEPADLAAGANVLLHAVLELAG 410 (412)
T ss_pred HHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEEE-eec-----CCCCCCCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 988875 76543 34577899999999888865443 432 235689999999999999999999999999864
No 44
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.9e-36 Score=275.85 Aligned_cols=274 Identities=16% Similarity=0.126 Sum_probs=189.8
Q ss_pred hHHHHHHHHhCCCceecc---CCCceEEEEecCCCCCEEEEEeccccCCCCC-CCCCCccc-cCCCceecC---CchHHH
Q 036756 2 GQLVRNELASLGIEYTWP---FAKTGIVASVGSGVQPWFGLRADMDALPIQE-MVEWEHKS-KNNGKMHAC---GHDVHT 73 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~---~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~-~~~~pf~~-~~~G~~~g~---g~kg~~ 73 (321)
++||+++|+ |++++.. .++.|+++..+ +|+|+|+||+||||.++ |+..||.. +++|++||+ |||+++
T Consensus 33 ~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~ 107 (364)
T PRK08737 33 FDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAA 107 (364)
T ss_pred HHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHH
Confidence 578888886 8887653 24579998642 37899999999999864 34458875 568999985 589999
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEecCCCccc--hhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 74 TMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG--GAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 74 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
+++|.|++. +.++|.|+|++|||.++ |++.+++.+. ++|++|+.+| ++. .+. ..++|..++
T Consensus 108 aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~~iv~Ep-----t~~-~~~--~~~kG~~~~ 170 (364)
T PRK08737 108 AALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEAVLVAEP-----TMS-EAV--LAHRGISSV 170 (364)
T ss_pred HHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCEEEEcCC-----CCc-eeE--EecceeEEE
Confidence 999999863 35689999999999874 8889998874 5799998754 332 111 356899999
Q ss_pred EEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhccc----C--------C-------------CchH----------
Q 036756 152 LAVIEGKGGHAAMP-HATRDPVLAASFAILALQQIVSRE----T--------D-------------PLEA---------- 195 (321)
Q Consensus 152 ~i~v~G~~aHss~p-~~g~nAi~~~~~~i~~l~~~~~~~----~--------~-------------p~~~---------- 195 (321)
+|+++|+++|+|.| +.|+|||..++++|.++.+..... . + |...
T Consensus 171 ~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p 250 (364)
T PRK08737 171 LMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLRFNIGRVEGGIKANMIAPAAELRFGFRPLP 250 (364)
T ss_pred EEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceEEeeEecCCCCCcCCCceEEEEEeeeCC
Confidence 99999999999988 589999999999998865432110 0 0 1000
Q ss_pred -----HHHHHH---HHHhCCeEEEEEeccccCCCCCccCC-HHHHHHH-HHHHHhhcCCcceeccCCCcCCCcHHHHHHH
Q 036756 196 -----RVIEMQ---AAVHQCSATLDFMEEKLRPYPATVND-EEMYEHA-KKVGTSLLGEANVHLLPMAMGAEDFSFYSQK 265 (321)
Q Consensus 196 -----~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~ 265 (321)
.+.+.+ .+....++++.+. .+.+++...+ .+++..+ +++.++ .+.+.. ....+++|+++|...
T Consensus 251 ~~~~e~v~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~tDa~~~~~~ 323 (364)
T PRK08737 251 SMDVDGLLATFAGFAEPAAATFEETFR---GPSLPSGDIARAEERRLAARDVADA-LDLPIG---NAVDFWTEASLFSAA 323 (364)
T ss_pred CCCHHHHHHHHHHHHHHcCCceEEEec---cCCCCCcccCcchHHHHHHHHHHhh-hcCCCC---ceeccccCHHHHHHc
Confidence 022222 2222233333331 2234443322 2445434 444443 354431 234568999999864
Q ss_pred -hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 036756 266 -MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAIS 311 (321)
Q Consensus 266 -~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~ 311 (321)
+|++.+ |+ |...++|++||||++++|.+++++|.+++.+
T Consensus 324 Gip~v~~--Gp-----G~~~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 324 GYTALVY--GP-----GDIAQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred CCCEEEE--CC-----CChhhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 999876 53 3346899999999999999999999998753
No 45
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.5e-35 Score=277.30 Aligned_cols=280 Identities=18% Similarity=0.165 Sum_probs=203.3
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC--CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG--VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||.++|+++||+++.. .+.|++|++++. ++|+|+|+|||||||.+ |+ .|||++++++|.
T Consensus 40 ~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~---~D~~~g~aa~l~ 103 (414)
T PRK12890 40 ARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GR---YDGILGVLAGLE 103 (414)
T ss_pred HHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CC---cCCHHHHHHHHH
Confidence 4789999999999999874 467999999764 35899999999999963 22 478999999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcc------chhhhHHHc------------------------CCCCCcceEE----
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMIKE------------------------GALEKFQGIF---- 124 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~~~------------------------g~~~~~d~~i---- 124 (321)
|++.|++.+..++++|.|++++|||++ .|++.+.+. |. ..|+++
T Consensus 104 a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ 181 (414)
T PRK12890 104 VVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGG--DPDALPGALR 181 (414)
T ss_pred HHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCC--Chhhcccccc
Confidence 999999877778999999999999973 266555332 21 123222
Q ss_pred ---------EeccCCC-----CCceeEEeeccccccceeEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhcc
Q 036756 125 ---------GLHVAPE-----LPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAA-MPH-ATRDPVLAASFAILALQQIVSR 188 (321)
Q Consensus 125 ---------~~~~~~~-----~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~-~g~nAi~~~~~~i~~l~~~~~~ 188 (321)
.+|...+ .++. ..+ ...++|..|++|+++|+++|+| .|+ .+.|||..+++++.+|+++..+
T Consensus 182 ep~~~~~~~~~h~~~g~~~~~~~~~-~~i--~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~ 258 (414)
T PRK12890 182 PPGAVAAFLELHIEQGPVLEAEGLP-IGV--VTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARA 258 (414)
T ss_pred CCCCccEEEEEeeCcCHHHHhCCCc-eEE--EEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHh
Confidence 2222100 0111 112 2357899999999999999998 586 4589999999999999886432
Q ss_pred cCC-------------------CchHH----------------------HHHHHHHHhCCeEEEEEeccccCCCCCccCC
Q 036756 189 ETD-------------------PLEAR----------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVND 227 (321)
Q Consensus 189 ~~~-------------------p~~~~----------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (321)
... |.... +++..+..++++++++. ...++++.++
T Consensus 259 ~~~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 334 (414)
T PRK12890 259 LLHDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELER----LSRSEPVPCD 334 (414)
T ss_pred cCCCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----eecCCCcCCC
Confidence 110 10000 22223334567777765 3456778889
Q ss_pred HHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHH
Q 036756 228 EEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAA 307 (321)
Q Consensus 228 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~ 307 (321)
+++++.+.+++++. |..+. ..++.+++|+++|....|.++++ |+ +....+|++||++++++|..++++|..
T Consensus 335 ~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~~-gp-----~~~~~aHs~dE~v~i~~l~~~~~i~~~ 405 (414)
T PRK12890 335 PALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMIF-VP-----CRGGISHNPEEAMDPEDLAAGARVLLD 405 (414)
T ss_pred HHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEEE-ec-----CCCCCCCCcCccCCHHHHHHHHHHHHH
Confidence 99999999999875 76543 34577899999999876766543 33 223569999999999999999999999
Q ss_pred HHHHHhc
Q 036756 308 VAISYLD 314 (321)
Q Consensus 308 ~~~~~~~ 314 (321)
++.+|.+
T Consensus 406 ll~~l~~ 412 (414)
T PRK12890 406 AVLRLDR 412 (414)
T ss_pred HHHHHhh
Confidence 9998853
No 46
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=280.22 Aligned_cols=295 Identities=16% Similarity=0.102 Sum_probs=207.3
Q ss_pred ChHHHHHHHHhCCC-ceecc--CCCceEEEEecCC-CCCEEEEEeccccCCCCC---CCCCCccc-cCCCceecC---Cc
Q 036756 1 AGQLVRNELASLGI-EYTWP--FAKTGIVASVGSG-VQPWFGLRADMDALPIQE---MVEWEHKS-KNNGKMHAC---GH 69 (321)
Q Consensus 1 ~a~~l~~~L~~~G~-~~~~~--~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~---~~~~pf~~-~~~G~~~g~---g~ 69 (321)
+++||.++|+++|| +++.. .+++|++++++++ ++|+|+|+||+||||+++ |+..||.. ++||++||| ||
T Consensus 46 ~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~ 125 (449)
T PRK07907 46 SAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADD 125 (449)
T ss_pred HHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCC
Confidence 36899999999998 66653 3678999999654 468999999999999875 34558986 468999985 57
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCC-CCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGA-LEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
||+++++|.|+++| +..++++|.|++++|||+| .|+++++++.. ..++|++|+.+++... .+.-.+. ..++|
T Consensus 126 Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~-~~~p~i~--~~~kG 199 (449)
T PRK07907 126 KGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSGNWS-VGVPALT--TSLRG 199 (449)
T ss_pred cHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCCcCC-CCCeEEE--EecCC
Confidence 99999999999998 2357789999999999987 59999988632 1247999998764211 1111122 24689
Q ss_pred eeEEEEEEE--ecCCCCCCC-CCCCCHHHHHHHHHHHHHHhhcc--------c---------------------------
Q 036756 148 SMRFLAVIE--GKGGHAAMP-HATRDPVLAASFAILALQQIVSR--------E--------------------------- 189 (321)
Q Consensus 148 ~~~~~i~v~--G~~aHss~p-~~g~nAi~~~~~~i~~l~~~~~~--------~--------------------------- 189 (321)
..+++++++ |+++|||.| ..+.|||..+++++.+|++...+ .
T Consensus 200 ~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (449)
T PRK07907 200 NADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIG 279 (449)
T ss_pred cEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccC
Confidence 999999999 899999974 67899999999999998653110 0
Q ss_pred ---------------------------CC--CchHH---------------HHHHHH---HH---hCCeEEEEEeccccC
Q 036756 190 ---------------------------TD--PLEAR---------------VIEMQA---AV---HQCSATLDFMEEKLR 219 (321)
Q Consensus 190 ---------------------------~~--p~~~~---------------~i~~~~---~~---~~~~~~~~~~~~~~~ 219 (321)
.| |.... +.+.+. +. +++++++++ ..
T Consensus 280 ~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~~~~~~~~~~~~----~~ 355 (449)
T PRK07907 280 TGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVAPGQDAAEAQDALVAHLEAHAPWGAHVTVER----GD 355 (449)
T ss_pred CChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE----CC
Confidence 00 10000 222222 22 145566654 22
Q ss_pred CCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcH-HHHHHH---hhheEEEecccCCCCCCCCCCCCCCCcC
Q 036756 220 PYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDF-SFYSQK---MAAALFMIGTRNETLKPVVRLHSPYLVI 293 (321)
Q Consensus 220 ~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~-~~~~~~---~p~~~~~~G~~~~~~g~~~~~H~~~E~v 293 (321)
.++++ ..++++++.+++++++++|.++. ....+++.+. +.|... +|++.+ |+++. ..++|++||++
T Consensus 356 ~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~~~~~~~~~~~~~~~~v~~--Gpg~~----~~~aH~~nE~i 427 (449)
T PRK07907 356 AGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGSIPFIAELQEAFPQAEILVT--GVEDP----KTRAHSPNESV 427 (449)
T ss_pred CcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHhcCCCcEEEe--ccCCC----CCCCcCCCCCc
Confidence 33443 34678999999999998887653 2233344332 334432 566554 54221 25799999999
Q ss_pred CCCcHHHHHHHHHHHHHHHh
Q 036756 294 DEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 294 ~~~~l~~~~~~~~~~~~~~~ 313 (321)
++++|.+++++|++++.+|-
T Consensus 428 ~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 428 HLGELERAAVAEALLLARLA 447 (449)
T ss_pred CHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999883
No 47
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=2.4e-35 Score=279.56 Aligned_cols=298 Identities=19% Similarity=0.164 Sum_probs=209.4
Q ss_pred hHHHHHHHHhCCCceecc--CCCceEEEEecCC--CCCEEEEEeccccCCCCC---CCCCCcccc-CCC-----ceecC-
Q 036756 2 GQLVRNELASLGIEYTWP--FAKTGIVASVGSG--VQPWFGLRADMDALPIQE---MVEWEHKSK-NNG-----KMHAC- 67 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~--~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~---~~~~pf~~~-~~G-----~~~g~- 67 (321)
++||+++|+++||+++.. .+++||++++++. .+|+|+|+||+||||+++ |+..||... ++| ++|||
T Consensus 46 ~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG 125 (464)
T PRK09104 46 ADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARG 125 (464)
T ss_pred HHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEec
Confidence 689999999999987642 3567999999652 359999999999999865 344589753 343 59985
Q ss_pred --CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCC-CCCcceEEEeccCCCCC-ceeEEeecc
Q 036756 68 --GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGA-LEKFQGIFGLHVAPELP-TGTIGSRPG 142 (321)
Q Consensus 68 --g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~-~~~~d~~i~~~~~~~~p-~g~~~~~~g 142 (321)
||||+++++|.|++.|++.+..++++|.|+|++|||+|+ |.+.++.+.. ..++|++|+.+++...+ ...+.
T Consensus 126 ~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i~---- 201 (464)
T PRK09104 126 ASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDTGMWDRETPAIT---- 201 (464)
T ss_pred ccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEEE----
Confidence 589999999999999998766788999999999999874 7777776422 11479999987532111 12232
Q ss_pred ccccceeEEEEEEEe--cCCCCCC-CCCCCCHHHHHHHHHHHHHHhhc--------------------------------
Q 036756 143 PMLAGSMRFLAVIEG--KGGHAAM-PHATRDPVLAASFAILALQQIVS-------------------------------- 187 (321)
Q Consensus 143 ~~~~g~~~~~i~v~G--~~aHss~-p~~g~nAi~~~~~~i~~l~~~~~-------------------------------- 187 (321)
.+++|..+++++++| +++|||. |+.|.|||..+++++.+|++...
T Consensus 202 ~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (464)
T PRK09104 202 TSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAF 281 (464)
T ss_pred eecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHH
Confidence 246899999999999 6899995 68999999999999999864200
Q ss_pred ------------------------ccCC-----------------CchH---------------HHHHHHHH---H-hCC
Q 036756 188 ------------------------RETD-----------------PLEA---------------RVIEMQAA---V-HQC 207 (321)
Q Consensus 188 ------------------------~~~~-----------------p~~~---------------~~i~~~~~---~-~~~ 207 (321)
...+ |... .+.+.+.+ . ...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~~~ 361 (464)
T PRK09104 282 LGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARLPA 361 (464)
T ss_pred HHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 0000 0000 02222222 1 122
Q ss_pred eEEEEEeccccCCCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCC-cHHHHHH--HhhheEEEecccCCCCCC
Q 036756 208 SATLDFMEEKLRPYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAE-DFSFYSQ--KMAAALFMIGTRNETLKP 282 (321)
Q Consensus 208 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~-D~~~~~~--~~p~~~~~~G~~~~~~g~ 282 (321)
.+++++.. ...+|+ ...++++++.+.++++++++.++. ....++++ |++.|.. .+|++.+++|..
T Consensus 362 ~~~v~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~gip~v~~g~G~~------ 431 (464)
T PRK09104 362 DCSVEFHD--HGGSPAIALPYDSPALAAAKAALSDEWGKPAV--LIGSGGSIPIVGDFKRILGMDSLLVGFGLD------ 431 (464)
T ss_pred CeEEEEEe--cCCCCceECCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHHhCCCEEEecCCCC------
Confidence 33343311 222344 345678999999999998777653 22333333 4566553 489887655531
Q ss_pred CCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 283 VVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 283 ~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
...+|++|||+++++|..++++|.+++..++
T Consensus 432 ~~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 432 DDRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred CCCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 2579999999999999999999999999886
No 48
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=278.42 Aligned_cols=295 Identities=16% Similarity=0.097 Sum_probs=207.4
Q ss_pred HHHHHHHhCCCceecc-----CCCceEEEEecCC-CCCEEEEEeccccCCCCC--CC--CCCccc-cCCCceecC---Cc
Q 036756 4 LVRNELASLGIEYTWP-----FAKTGIVASVGSG-VQPWFGLRADMDALPIQE--MV--EWEHKS-KNNGKMHAC---GH 69 (321)
Q Consensus 4 ~l~~~L~~~G~~~~~~-----~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~--~~--~~pf~~-~~~G~~~g~---g~ 69 (321)
|+.++|+++||+++.. .+++||+++++++ ++|+|+|+||+||||.++ |+ ..||.. ++||++||| ||
T Consensus 49 ~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~Dm 128 (469)
T PRK07079 49 EIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADN 128 (469)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCC
Confidence 4456899999998642 2467999998654 468999999999999764 44 278985 578999985 58
Q ss_pred hHHHHHHHHHHHHHHhc-cCCCCceEEEEEecCCCccc-hhhhHHHcCC--CCCcceEEEeccCCCCCce-eEEeecccc
Q 036756 70 DVHTTMLLGAARLLKQR-KDRLKGTVKLVFQPGEESYG-GAYHMIKEGA--LEKFQGIFGLHVAPELPTG-TIGSRPGPM 144 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~-~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~--~~~~d~~i~~~~~~~~p~g-~~~~~~g~~ 144 (321)
||+++++|+|+++|.+. +..++++|.|+|++|||+++ |+++++++.. + ++|++|+.+++...+.. .+. ..
T Consensus 129 Kgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~-~~d~~iv~e~~~~~~~~~~i~----~g 203 (469)
T PRK07079 129 KGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREAL-AADVLIASDGPRLSAERPTLF----LG 203 (469)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhc-CCCEEEEeCCCccCCCCeEEE----Ee
Confidence 99999999999998653 36788999999999999884 9999998742 3 47999998754222221 222 34
Q ss_pred ccceeEEEEEEEecC--CCCCCCCCC--CCHHHHHHHHHHHHHHhhc--------------------------c------
Q 036756 145 LAGSMRFLAVIEGKG--GHAAMPHAT--RDPVLAASFAILALQQIVS--------------------------R------ 188 (321)
Q Consensus 145 ~~g~~~~~i~v~G~~--aHss~p~~g--~nAi~~~~~~i~~l~~~~~--------------------------~------ 188 (321)
++|..+++|+++|++ .||+ ++.| .||+..++++|.++.+... .
T Consensus 204 ~kG~~~~~v~v~G~~~~~hs~-~~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (469)
T PRK07079 204 SRGAVNFRLRVNLRDGAHHSG-NWGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPA 282 (469)
T ss_pred cceEEEEEEEEeeCCCCCCCC-ccccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccC
Confidence 689999999999984 4655 4444 7999999999998843100 0
Q ss_pred --------------------cCC----------------CchH--------------H-H---HHHHHHHhCC-eEEEEE
Q 036756 189 --------------------ETD----------------PLEA--------------R-V---IEMQAAVHQC-SATLDF 213 (321)
Q Consensus 189 --------------------~~~----------------p~~~--------------~-~---i~~~~~~~~~-~~~~~~ 213 (321)
..+ |... . + ++...+..+. .+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~~~~v~~~~ 362 (469)
T PRK07079 283 IDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHGFPMVEVTV 362 (469)
T ss_pred cccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 000 0000 0 2 2233233332 356665
Q ss_pred eccccCCCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH--HhhheEEEecccCCCCCCCCCCCCC
Q 036756 214 MEEKLRPYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ--KMAAALFMIGTRNETLKPVVRLHSP 289 (321)
Q Consensus 214 ~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~--~~p~~~~~~G~~~~~~g~~~~~H~~ 289 (321)
...+++ ...++++++.+++++++++|..+.. .....+++|.++|.. .+|++++ |+.. || ..+|++
T Consensus 363 ----~~~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~giP~v~~--g~~~--~~--~~~H~~ 431 (469)
T PRK07079 363 ----ERGSPATRLDPDDPWVRWALASIARTTGKKPAL-LPNLGGSLPNDVFADILGLPTLWV--PHSY--PA--CSQHAP 431 (469)
T ss_pred ----eCCCCceecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCcchhHHHHHHHhCCCEEEe--cCCC--CC--ccCcCC
Confidence 233344 3456789999999999887765432 123456678888875 4999854 3321 12 357999
Q ss_pred CCcCCCCcHHHHHHHHHHHHHHHhcc
Q 036756 290 YLVIDEDVLPIGAALHAAVAISYLDD 315 (321)
Q Consensus 290 ~E~v~~~~l~~~~~~~~~~~~~~~~~ 315 (321)
||||++++|..++++|.+++.+|+..
T Consensus 432 dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 432 NEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999764
No 49
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.8e-35 Score=271.30 Aligned_cols=274 Identities=17% Similarity=0.181 Sum_probs=196.3
Q ss_pred ChHHHHHHHHhC-CCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecCC---chHHHHHH
Q 036756 1 AGQLVRNELASL-GIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACG---HDVHTTML 76 (321)
Q Consensus 1 ~a~~l~~~L~~~-G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g---~kg~~aa~ 76 (321)
+++||+++|+++ |+++... ..|++++++++.+++|+|+|||||||+.+ .+|+. .+||++|||| ||+++|++
T Consensus 29 ~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~~-~~~g~i~GrG~~D~Kg~~a~~ 103 (352)
T PRK13007 29 LADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPSR-REGDRLYGCGASDMKSGLAVM 103 (352)
T ss_pred HHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCcc-eeCCEEEccCcccccHHHHHH
Confidence 368999999996 8887653 47999999655457899999999999764 23333 4689999976 58999999
Q ss_pred HHHHHHHHhccCCCCceEEEEEecCCCcc---chhhhHHHcCC-CCCcceEEEeccCCCCCceeEEeeccccccceeEEE
Q 036756 77 LGAARLLKQRKDRLKGTVKLVFQPGEESY---GGAYHMIKEGA-LEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFL 152 (321)
Q Consensus 77 l~a~~~l~~~~~~~~~~i~~~~~~dEE~g---~G~~~l~~~g~-~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~ 152 (321)
|.|++.|. +++++|.|+|++|||++ .|++.+++... +.++|++|+.|++. +.+. ..++|..+++
T Consensus 104 l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~~----~~i~----~~~~G~~~~~ 171 (352)
T PRK13007 104 LHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPTD----GVIE----AGCQGTLRVT 171 (352)
T ss_pred HHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCCC----CceE----eeccceEEEE
Confidence 99999984 47889999999999975 38888887532 23579999987532 2222 2357999999
Q ss_pred EEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-----------CC-------------CchH-------------
Q 036756 153 AVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE-----------TD-------------PLEA------------- 195 (321)
Q Consensus 153 i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~-----------~~-------------p~~~------------- 195 (321)
|+++|+++|||.|+.|.||+..+++++.+|+.+..+. .+ |...
T Consensus 172 i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~nviP~~a~~~~diR~~p~~~ 251 (352)
T PRK13007 172 VTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGVAGNVIPDECVVNVNYRFAPDRS 251 (352)
T ss_pred EEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCCcCccCCCeEEEEEEEeeCCCCC
Confidence 9999999999999999999999999999998764221 00 0000
Q ss_pred --HHHHHHHHH-hCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH-hhheEE
Q 036756 196 --RVIEMQAAV-HQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALF 271 (321)
Q Consensus 196 --~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~ 271 (321)
.+.+.+.+. .+.. ++++... ...+++ ..++++++.+.+++ |..+ .+..+++|+++++.. +|++.+
T Consensus 252 ~~~v~~~i~~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~----g~~~----~~~~g~td~~~~~~~Gip~v~~ 320 (352)
T PRK13007 252 LEEALAHVREVFDGFA-EVEVTDL-APGARP-GLDHPAAAALVAAV----GGEV----RAKYGWTDVARFSALGIPAVNF 320 (352)
T ss_pred HHHHHHHHHHHhcccc-EEEeecc-cCCCCC-CCCCHHHHHHHHHh----CCCC----ccccccchHHHHHhCCCCEEEe
Confidence 033333222 1221 4443111 222222 23556777776652 4332 235688999999875 998865
Q ss_pred EecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 272 MIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 272 ~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
|+ |....+|++|||+++++|.+++++|..++
T Consensus 321 --Gp-----g~~~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 321 --GP-----GDPALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred --CC-----CchhhccCCCCceEHHHHHHHHHHHHHHh
Confidence 53 33468999999999999999999999875
No 50
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=2.6e-35 Score=274.43 Aligned_cols=281 Identities=16% Similarity=0.163 Sum_probs=203.5
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC-C-CCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG-V-QPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||+++|+++|++++.+ ...||++++++. + +|.|+|+||+||||.+ |+.+| +.+++++|+
T Consensus 33 ~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg---~~gvaa~l~ 96 (401)
T TIGR01879 33 AQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDG---QLGVLAGIE 96 (401)
T ss_pred HHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCC---HHHHHHHHH
Confidence 4789999999999998764 468999999764 3 5899999999999963 33333 358899999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCc-----c-chhhhHHHcC-------------C--------C------------CC
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEES-----Y-GGAYHMIKEG-------------A--------L------------EK 119 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~-----g-~G~~~l~~~g-------------~--------~------------~~ 119 (321)
+++.|++.+.+++++|.|++++|||+ + .|++.++... . . .+
T Consensus 97 a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~ 176 (401)
T TIGR01879 97 VVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPNQPLRPRGD 176 (401)
T ss_pred HHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccccccccccc
Confidence 99999998888999999999999996 2 3787775421 0 0 01
Q ss_pred cceEEEeccCCC---CCcee-EEeeccccccceeEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccCC--
Q 036756 120 FQGIFGLHVAPE---LPTGT-IGSRPGPMLAGSMRFLAVIEGKGGHAAM-PH-ATRDPVLAASFAILALQQIVSRETD-- 191 (321)
Q Consensus 120 ~d~~i~~~~~~~---~p~g~-~~~~~g~~~~g~~~~~i~v~G~~aHss~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~-- 191 (321)
+++.+.+|.+.+ ++.|. +.+. ..++|..|++|+++|+++|++. |+ .|+|||..+++++.+|+++..+..+
T Consensus 177 ~~~~~e~Hieqg~~l~~~g~~~~v~--~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~~~~~ 254 (401)
T TIGR01879 177 IKAYVELHIEQGPVLESNGQPIGVV--NAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRMGDPT 254 (401)
T ss_pred ccEEEEEEEcCCcChhhCCCeEEEE--EEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCe
Confidence 233444444211 11121 2222 3568999999999999999985 54 6899999999999999987432111
Q ss_pred -----------------Cch-----------HH-----------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHH
Q 036756 192 -----------------PLE-----------AR-----------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYE 232 (321)
Q Consensus 192 -----------------p~~-----------~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 232 (321)
|.. .. +++.+++..++++++++ ...++++.+++++++
T Consensus 255 ~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~lv~ 330 (401)
T TIGR01879 255 VGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER----WMDEEPVPCSEELVA 330 (401)
T ss_pred EEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE----eecCCCcCCCHHHHH
Confidence 100 00 23333344577777776 345677888999999
Q ss_pred HHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 233 HAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 233 ~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
.+++++++. |.+.. ..++.+++|+++|+...|..++ +|+ |....+|++|||+++++|.+++++|+.++.++
T Consensus 331 ~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v~-fgP-----g~~~~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 331 ALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGMI-FIP-----SINGISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEEE-Eec-----CCCCCcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 999999876 76543 2457789999999876444333 343 22357899999999999999999999998764
No 51
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=3.9e-35 Score=270.50 Aligned_cols=271 Identities=18% Similarity=0.165 Sum_probs=187.8
Q ss_pred ChHHHHHHHHhCCCc-eeccCCCceEEEEecCCCCCEEEEEeccccCCCCCC--CCC---Cc--------c-ccCCCcee
Q 036756 1 AGQLVRNELASLGIE-YTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEM--VEW---EH--------K-SKNNGKMH 65 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~-~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~--~~~---pf--------~-~~~~G~~~ 65 (321)
+++||.++|+++|++ ++....+.||+++++++++|+|+|+|||||||+++. ..| || . .+++|++|
T Consensus 18 ~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~ly 97 (373)
T TIGR01900 18 IADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILW 97 (373)
T ss_pred HHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEE
Confidence 368999999999754 221111359999986544689999999999998642 223 32 2 35689999
Q ss_pred cCC---chHHHHHHHHHHHHHHh--ccCCCCceEEEEEecCCCcc---chhhhHHHcCC-CCCcceEEEeccCCCCCcee
Q 036756 66 ACG---HDVHTTMLLGAARLLKQ--RKDRLKGTVKLVFQPGEESY---GGAYHMIKEGA-LEKFQGIFGLHVAPELPTGT 136 (321)
Q Consensus 66 g~g---~kg~~aa~l~a~~~l~~--~~~~~~~~i~~~~~~dEE~g---~G~~~l~~~g~-~~~~d~~i~~~~~~~~p~g~ 136 (321)
||| ||++++++|+|++.|++ .+..++++|.|+|++|||++ .|++.++++.. +.++|++|+.|++. ..
T Consensus 98 GRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept~----~~ 173 (373)
T TIGR01900 98 GCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEPTG----GG 173 (373)
T ss_pred ecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECCCC----Cc
Confidence 965 68999999999999954 34467899999999999975 38999988643 12579999876532 12
Q ss_pred EEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhccc-----------CC-------------C
Q 036756 137 IGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRE-----------TD-------------P 192 (321)
Q Consensus 137 ~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~-----------~~-------------p 192 (321)
+ . ..++|..+++|+++|+++|+|.|+.|.|||..+++++.+|+++.... .+ |
T Consensus 174 i--~--~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~t~~v~~I~GG~~~nvVP 249 (373)
T TIGR01900 174 I--E--AGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYREGLNATFCEGGKANNVIP 249 (373)
T ss_pred c--c--ccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccceEEEEEEeCCCCCcccC
Confidence 2 2 24689999999999999999999999999999999999998764211 00 1
Q ss_pred chHH---------------HHHH---------------HHHHh---C-CeEEEEEeccccCCCCC--ccCCHHHHHHHHH
Q 036756 193 LEAR---------------VIEM---------------QAAVH---Q-CSATLDFMEEKLRPYPA--TVNDEEMYEHAKK 236 (321)
Q Consensus 193 ~~~~---------------~i~~---------------~~~~~---~-~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~ 236 (321)
.... +.+. +.+.. + ..++++. ....++ ...+.++++.+.+
T Consensus 250 ~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 325 (373)
T TIGR01900 250 DEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAM----EDEAGGALPGLGAPLAQDLID 325 (373)
T ss_pred CeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEE----cccCCCCCCCCCCHHHHHHHH
Confidence 0000 2222 21111 1 1233333 111111 1235678888888
Q ss_pred HHHhhcCCcceeccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCC
Q 036756 237 VGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVID 294 (321)
Q Consensus 237 ~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~ 294 (321)
+++++++..+. ...+++|+++|... +|++.+ |+ |+..++|++||||+
T Consensus 326 a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~~--Gp-----g~~~~aH~~dE~v~ 373 (373)
T TIGR01900 326 AVGEEKGRDPL----AKFGWTDVARFSALGIPALNF--GA-----GDPLFAHKHDEQCP 373 (373)
T ss_pred HHHhccCCCcc----cccCCccHHHHHhcCCCEEEe--CC-----CChhhccCCCCCCC
Confidence 88888776542 25688999998764 899875 54 33458999999985
No 52
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=5e-35 Score=280.07 Aligned_cols=295 Identities=14% Similarity=0.124 Sum_probs=203.4
Q ss_pred hHHHHHHHHhCCCceeccCCCceE-E-EEecCCCCCEEEEEeccccCCCCC--CCC-----CCccc-cCCCceecC---C
Q 036756 2 GQLVRNELASLGIEYTWPFAKTGI-V-ASVGSGVQPWFGLRADMDALPIQE--MVE-----WEHKS-KNNGKMHAC---G 68 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~~~~nv-i-a~~~~~~~~~i~l~~H~DtVp~~~--~~~-----~pf~~-~~~G~~~g~---g 68 (321)
++||.++|+++|++++. ..|+ + +++++...|+|+|+|||||||++. |+. .||.. ++||++||| |
T Consensus 78 ~~~l~~~l~~~G~~~~~---~~~~v~~~~~~g~~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D 154 (520)
T PRK06156 78 KKLLKSLARDFGLDYRN---VDNRVLEIGLGGSGSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTED 154 (520)
T ss_pred HHHHHHHHHHCCCeEEe---cCCeEEEEEecCCCCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEcCccc
Confidence 57999999999999854 2454 4 677654358999999999999863 444 68875 468999985 5
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccC----CCCCc---------
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVA----PELPT--------- 134 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~----~~~p~--------- 134 (321)
||++++++|+|++.|++.+..++++|.|+|++|||.+ .|++++++++. .+++++.++.. ..+|+
T Consensus 155 ~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~--~~~~~~~~D~~~~~~~~E~~~~~~~i~~~ 232 (520)
T PRK06156 155 DKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT--PPDYNITLDAEYPVVTAEKGWGTIMATFP 232 (520)
T ss_pred chHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC--CCCeEEeeCCCCceEEEecceEEEEEEec
Confidence 7999999999999998877778899999999999987 49999988754 24554332210 00110
Q ss_pred -------------------------e-eEEeecc-----------------cccccee---------EEEEEEEecCCCC
Q 036756 135 -------------------------G-TIGSRPG-----------------PMLAGSM---------RFLAVIEGKGGHA 162 (321)
Q Consensus 135 -------------------------g-~~~~~~g-----------------~~~~g~~---------~~~i~v~G~~aHs 162 (321)
. ...+... ..++|.. |++|+++|+++|+
T Consensus 233 ~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHs 312 (520)
T PRK06156 233 KRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHS 312 (520)
T ss_pred CcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCC
Confidence 0 0000000 0122333 8999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhc-----------------------------cc------CCCc--hH---H------
Q 036756 163 AMPHATRDPVLAASFAILALQQIVS-----------------------------RE------TDPL--EA---R------ 196 (321)
Q Consensus 163 s~p~~g~nAi~~~~~~i~~l~~~~~-----------------------------~~------~~p~--~~---~------ 196 (321)
|.|+.|.|||..+++++.+|+++.. .. .++. .+ .
T Consensus 313 S~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~~~~~l~iD 392 (520)
T PRK06156 313 STPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDDKGTEVTVN 392 (520)
T ss_pred CCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEEEeCCeEEEEEE
Confidence 9999999999999999999875110 00 0000 00 0
Q ss_pred -----------H---HHHHH----HHhCCeEEEEEeccccCCCCC-ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCC
Q 036756 197 -----------V---IEMQA----AVHQCSATLDFMEEKLRPYPA-TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAE 257 (321)
Q Consensus 197 -----------~---i~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~ 257 (321)
+ ++.+. ..+++++++.. ....|. ...++++++.+++++++++|.++. +..+.+++
T Consensus 393 iR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~----~~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggT 466 (520)
T PRK06156 393 LRRPVGKTPELLKGEIADALAAWQAKHQVALDIDY----YWGEPMVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGST 466 (520)
T ss_pred eeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEee----cCCCceeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChh
Confidence 2 22222 22455555543 112232 233668999999999988787543 34567899
Q ss_pred cHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 258 DFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 258 D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
|++++. |++. +|+.. +|....+|++|||+++++|..++++|.+++.+|++
T Consensus 467 Da~~~~---~~v~--fGP~~--~g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 467 NAKLFP---NAVS--FGPAM--PGVKYTGHTENEFKTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred hhhhCC---ccEE--EcCCC--CCCCCCCcCcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 998874 3443 46532 23334689999999999999999999999999986
No 53
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-35 Score=276.94 Aligned_cols=292 Identities=12% Similarity=0.038 Sum_probs=195.4
Q ss_pred hHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCC---CCCCccc-cCCCceecC---CchHHHH
Q 036756 2 GQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEM---VEWEHKS-KNNGKMHAC---GHDVHTT 74 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~---~~~pf~~-~~~G~~~g~---g~kg~~a 74 (321)
++|+.++|+++||+++.+....+++++++. .+|+|+|+||+||||+++. +..||+. ++||++||| ||||+++
T Consensus 44 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~-~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKggla 122 (444)
T PRK07205 44 LEATLDLCQGLGFKTYLDPKGYYGYAEIGQ-GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSM 122 (444)
T ss_pred HHHHHHHHHhCCCEEEEcCCCeEEEEEecC-CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHH
Confidence 467889999999998664333466777643 3589999999999998754 4448985 578999995 5899999
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCC----Ccce--------------EEEeccCCCCCce
Q 036756 75 MLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALE----KFQG--------------IFGLHVAPELPTG 135 (321)
Q Consensus 75 a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~----~~d~--------------~i~~~~~~~~p~g 135 (321)
++|.|+++|++.+..++++|.|+|++|||+++ |++++++..... .+|. .|..+ |+.
T Consensus 123 a~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~~-----~~~ 197 (444)
T PRK07205 123 AALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATMGFAPDSSFPLTYAEKGLLQAKLVGP-----GSD 197 (444)
T ss_pred HHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCeeECCCCCCceEEEEeceEEEEEEeC-----Ccc
Confidence 99999999998887889999999999999874 888887642110 1221 22221 221
Q ss_pred eEEeecc-----------------------ccccce----eEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh--
Q 036756 136 TIGSRPG-----------------------PMLAGS----MRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIV-- 186 (321)
Q Consensus 136 ~~~~~~g-----------------------~~~~g~----~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~-- 186 (321)
......| ..++|. .+.+++++|+++|||.|+.|.|||..+++++.++++..
T Consensus 198 ~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~ 277 (444)
T PRK07205 198 QLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSVHAKDAPQGINAVIRLAKALVVLEPHPAL 277 (444)
T ss_pred ceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEcccCCCccCcCHHHHHHHHHHhccHHHHH
Confidence 1100000 011232 23499999999999999999999999999998886420
Q ss_pred ---cc----------------c--C-----C-------Cch--------------H-HHHHHH---HHHhCCeEEEEEec
Q 036756 187 ---SR----------------E--T-----D-------PLE--------------A-RVIEMQ---AAVHQCSATLDFME 215 (321)
Q Consensus 187 ---~~----------------~--~-----~-------p~~--------------~-~~i~~~---~~~~~~~~~~~~~~ 215 (321)
.+ . . + |.. . .+.+.+ ++..+ ++++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~nvvP~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~~~--v~~~~-- 353 (444)
T PRK07205 278 DFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGLTITKEKSEIRIDIRIPVLADKEKLVQQLSQKAQEYG--LTYEE-- 353 (444)
T ss_pred HHHHHhcCCCCccccCCccccCCCcCCceEEeEEEEEECCEEEEEEEEeCCCCCCHHHHHHHHHHHHHHcC--cEEEE--
Confidence 00 0 0 0 100 0 022322 33333 33332
Q ss_pred cccCCCCC--ccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcC
Q 036756 216 EKLRPYPA--TVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVI 293 (321)
Q Consensus 216 ~~~~~~~~--~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v 293 (321)
...+++ ...++++++.+++++++.+|.... ...+++++|..++ .|++. +|+.. ||....+|++|||+
T Consensus 354 --~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~gg~~~~~~~---~~~i~--~G~~~--Pg~~~~aH~~nE~v 422 (444)
T PRK07205 354 --FDYLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQSSGGATFARTM---PNCVA--FGALF--PGAPQTEHQANEHI 422 (444)
T ss_pred --ecCCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eEEeccHHHHHhC---CCcEE--ECCcc--CCCCCCCcCcccCc
Confidence 122344 345678999999999987776432 2234455554432 35543 45322 34456899999999
Q ss_pred CCCcHHHHHHHHHHHHHHHhc
Q 036756 294 DEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 294 ~~~~l~~~~~~~~~~~~~~~~ 314 (321)
++++|.+++++|.+++.+++.
T Consensus 423 ~i~~l~~~~~~l~~~l~~l~~ 443 (444)
T PRK07205 423 VLEDLYRAMDIYAEAIYRLTT 443 (444)
T ss_pred cHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999875
No 54
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=9.5e-35 Score=270.26 Aligned_cols=283 Identities=16% Similarity=0.156 Sum_probs=210.8
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC--CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG--VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLG 78 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~ 78 (321)
+++||.+||+++|++++.+. .+|+++++++. +.|.|++.+||||||.+ |+. |...++++.|.
T Consensus 35 a~~~~~~~~~~~Gl~v~~D~-~gN~~~~~~g~~~~~~~i~~gsHlDtv~~g------------G~~---dg~~Gv~~~le 98 (406)
T TIGR03176 35 AQQQFKKRMAESGLETRFDD-VGNLYGRLVGTEFPEETILTGSHIDTVVNG------------GNL---DGQFGALAAWL 98 (406)
T ss_pred HHHHHHHHHHHcCCEEEEcC-CCcEEEEecCCCCCCCeEEEeccccCCCCC------------Ccc---CchhhHHHHHH
Confidence 47899999999999998754 58999999764 34899999999999954 221 23478999999
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcc------chhhhHHH------------------------cCC--------CCCc
Q 036756 79 AARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMIK------------------------EGA--------LEKF 120 (321)
Q Consensus 79 a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~~------------------------~g~--------~~~~ 120 (321)
+++.|++++..++++|.++++.+||++ .|++.+.- .|+ ..++
T Consensus 99 ~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~ 178 (406)
T TIGR03176 99 AVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAPTVRDDI 178 (406)
T ss_pred HHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccccccccccc
Confidence 999999998899999999999999974 27766651 011 0135
Q ss_pred ceEEEeccC--CCCC-ce-eEEeeccccccceeEEEEEEEecCCCCCCCCC--CCCHHHHHHHHHHHHHHhhcccCC---
Q 036756 121 QGIFGLHVA--PELP-TG-TIGSRPGPMLAGSMRFLAVIEGKGGHAAMPHA--TRDPVLAASFAILALQQIVSRETD--- 191 (321)
Q Consensus 121 d~~i~~~~~--~~~p-~g-~~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~--g~nAi~~~~~~i~~l~~~~~~~~~--- 191 (321)
++.+.+|.+ +... .| .+.+. ..++|..+++|+++|+++|+|.|.. ++|||.++++++.+|+++..+..+
T Consensus 179 ~~~~elHieqG~~Le~~g~~igiv--~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~~~~~~~ 256 (406)
T TIGR03176 179 KAFVELHIEQGCVLESEGQSIGVV--NAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKEIGDPLV 256 (406)
T ss_pred ceEEEEEECCCcchHHCCCeEEEE--eecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 678888873 3222 22 23333 3467999999999999999996554 489999999999999876432111
Q ss_pred ----------------CchH-----------H-----------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHH
Q 036756 192 ----------------PLEA-----------R-----------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEH 233 (321)
Q Consensus 192 ----------------p~~~-----------~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 233 (321)
|... . .++.+++.++++++++. ....++...++++++.
T Consensus 257 ~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~----~~~~~p~~~d~~lv~~ 332 (406)
T TIGR03176 257 LTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDL----WMDEAPVPMNKEIVAI 332 (406)
T ss_pred EEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----EecCCCCCCCHHHHHH
Confidence 1000 0 34445556788888765 2223445667899999
Q ss_pred HHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 234 AKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 234 ~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
+++++++. +.... ..++++++|+++|+..+|++++|.+.. .+.+|+++||+++++|..++++|..++.+++
T Consensus 333 l~~a~~~~-~~~~~--~~~sggg~Da~~~~~~vP~~~ifgp~~------~g~~H~p~E~v~~e~l~~g~~vl~~~l~~l~ 403 (406)
T TIGR03176 333 IEQLAKAE-KLNYR--LMHSGAGHDAQIFAPRVPTAMIFVPSI------GGISHNPAERTNIEDLVEGVKTLADMLYELA 403 (406)
T ss_pred HHHHHHHc-CCCce--ecCcccHHHHHHHHHHCCEEEEEEeCC------CCCCCCccccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999887 43332 346778999999999999987654432 2578999999999999999999999999987
Q ss_pred c
Q 036756 314 D 314 (321)
Q Consensus 314 ~ 314 (321)
.
T Consensus 404 ~ 404 (406)
T TIGR03176 404 Y 404 (406)
T ss_pred c
Confidence 5
No 55
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=5.5e-34 Score=259.71 Aligned_cols=274 Identities=14% Similarity=0.081 Sum_probs=199.4
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecC---CchHHHHHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHAC---GHDVHTTMLL 77 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~---g~kg~~aa~l 77 (321)
+++||+++|+++|+++.. +..+|+++..++ ++|+|+|+|||||||. .|+. ..+||++||+ |||++++++|
T Consensus 19 ~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~-~~~~g~i~GrG~~D~Kg~~aa~l 91 (336)
T TIGR01902 19 AAKFLEEISKDLGLKLII-DDAGNFILGKGD-GHKKILLAGHVDTVPG----YIPV-KIEGGLLYGRGAVDAKGPLIAMI 91 (336)
T ss_pred HHHHHHHHHHHcCCEEEE-CCCCcEEEEeCC-CCceEEEEccccccCC----Cccc-EEeCCEEEEecccCCCcHHHHHH
Confidence 478999999999999854 345789887643 3699999999999994 2333 2458999985 5899999999
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEE
Q 036756 78 GAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIE 156 (321)
Q Consensus 78 ~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~ 156 (321)
.|++.|++. +++|.|+|++|||++ .|+++++++.. .+++|+.|++. .+.+. .+++|..+++++++
T Consensus 92 ~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~ept~---~~~i~----~~~kG~~~~~v~~~ 157 (336)
T TIGR01902 92 FATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGEPSG---AEGIT----LGYKGSLQLKIMCE 157 (336)
T ss_pred HHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEecCCC---Cccee----eeeeeEEEEEEEEE
Confidence 999999753 468999999999997 49999998743 45888876532 11222 24689999999999
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhccc------CC-------------Cch---------------HHHHHHH
Q 036756 157 GKGGHAAMPHATRDPVLAASFAILALQQ-IVSRE------TD-------------PLE---------------ARVIEMQ 201 (321)
Q Consensus 157 G~~aHss~p~~g~nAi~~~~~~i~~l~~-~~~~~------~~-------------p~~---------------~~~i~~~ 201 (321)
|+++|||.|. ||+..+.+++..|.+ +..+. .+ |.. ..+++.+
T Consensus 158 G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~gg~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i 234 (336)
T TIGR01902 158 GTPFHSSSAG---NAAELLIDYSKKIIEVYKQPENYDKPSIVPTIIRFGESYNDTPAKLELHFDLRYPPNNKPEEAIKEI 234 (336)
T ss_pred ecCcccCCCh---hHHHHHHHHHHHHHHHhccccCCCCCcceeEEEEccCCCcCCCceEEEEEEEeeCCCCCHHHHHHHH
Confidence 9999999886 489999999998873 32110 11 100 0044444
Q ss_pred HHHhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH--hhheEEEecccC
Q 036756 202 AAVHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK--MAAALFMIGTRN 277 (321)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~--~p~~~~~~G~~~ 277 (321)
.+. ..+++++ ...++|. ..++++++.++++++++ +..+. ...+.+++|++++... +|++.| |+
T Consensus 235 ~~~--~~~~~~~----~~~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~--~~~~~g~tD~~~~~~~~g~p~v~~--Gp-- 301 (336)
T TIGR01902 235 TDK--FPICLEI----VDETPPYKVSRNNPLVRAFVRAIRKQ-GMKPR--LKKKTGTSDMNILAPIWTVPMVAY--GP-- 301 (336)
T ss_pred Hhc--cCceEEE----EeccCceecCCCCHHHHHHHHHHHHc-CCCeE--EeeccccCccceeccccCCCeEEE--CC--
Confidence 442 2334443 2233444 35678999999999987 54443 2345688999999764 777754 54
Q ss_pred CCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHhc
Q 036756 278 ETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYLD 314 (321)
Q Consensus 278 ~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~~ 314 (321)
|....+|++|||+++++|.+++++|.+++.+++.
T Consensus 302 ---g~~~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~ 335 (336)
T TIGR01902 302 ---GDSTLDHTPQEKISLAEYLIGIKTLMLAIEELWQ 335 (336)
T ss_pred ---CCcccCCCCcceeEHHHHHHHHHHHHHHHHHHhc
Confidence 3345789999999999999999999999998864
No 56
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=9.4e-34 Score=273.89 Aligned_cols=284 Identities=15% Similarity=0.179 Sum_probs=215.9
Q ss_pred ChHHHHHHHHhCCCc-eeccCCCceEEEEecCC--CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHH
Q 036756 1 AGQLVRNELASLGIE-YTWPFAKTGIVASVGSG--VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLL 77 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~-~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l 77 (321)
+++||.+||+++|++ ++.+. .+||++++++. +.|.|++.+|+||||. +|+.+|+ .+++++|
T Consensus 216 ~~~~~~~~~~~~Gl~~v~~D~-~gNv~~~~~g~~~~~p~v~~gSHlDTV~~------------gG~~DG~---~Gv~a~l 279 (591)
T PRK13799 216 CANQISDWMRDAGFDEVEIDA-VGNVVGRYKAADDDAKTLITGSHYDTVRN------------GGKYDGR---EGIFLAI 279 (591)
T ss_pred HHHHHHHHHHHcCCCeEeECC-CCCEEEEcCCCCCCCCeEEEeccccccCC------------CCccccH---HHHHHHH
Confidence 468999999999998 88754 68999999764 3699999999999984 3666666 8999999
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCcc------chhhhHH--------H----cCC---------------C-------
Q 036756 78 GAARLLKQRKDRLKGTVKLVFQPGEESY------GGAYHMI--------K----EGA---------------L------- 117 (321)
Q Consensus 78 ~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~l~--------~----~g~---------------~------- 117 (321)
.+++.|++.+..++++|.|+++.+||+. .|++.+. + +|. .
T Consensus 280 ~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~ 359 (591)
T PRK13799 280 ACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDP 359 (591)
T ss_pred HHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCC
Confidence 9999999999999999999999999972 3676665 1 122 0
Q ss_pred CCcceEEEeccCCC--CC-ce-eEEeeccccccceeEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhcccCC
Q 036756 118 EKFQGIFGLHVAPE--LP-TG-TIGSRPGPMLAGSMRFLAVIEGKGGHAAM-PH-ATRDPVLAASFAILALQQIVSRETD 191 (321)
Q Consensus 118 ~~~d~~i~~~~~~~--~p-~g-~~~~~~g~~~~g~~~~~i~v~G~~aHss~-p~-~g~nAi~~~~~~i~~l~~~~~~~~~ 191 (321)
.++++.+.+|.+.+ +. .| .+.+. ..++|..+++|+|+|+++|+|. |+ .++|||..+++++..++++..+...
T Consensus 360 ~~~~a~~ElHIEQgp~Le~~~~~igvV--~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~~~ 437 (591)
T PRK13799 360 ADVLGFIEVHIEQGPVLLELDIPLGIV--TSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQDQH 437 (591)
T ss_pred CCccEEEEEEeCCCHHHHHCCCcEEEE--eeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhcCC
Confidence 13457778876532 10 11 22233 3467999999999999999995 64 5899999999999999887432100
Q ss_pred -------------CchHH-----------------------------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHH
Q 036756 192 -------------PLEAR-----------------------------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEE 229 (321)
Q Consensus 192 -------------p~~~~-----------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (321)
|.... .++.+++.+++++++++ ....++..++++
T Consensus 438 ~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~----~~~~~~~~~d~~ 513 (591)
T PRK13799 438 ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAEL----AMKAAAAPCAPE 513 (591)
T ss_pred CCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----EecCCCcCCCHH
Confidence 10000 34445556788888776 345677888999
Q ss_pred HHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 230 MYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 230 l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
+++.+++++++. |.... ..++++++|+++|+...|..++|+++++ .+.+|+++||+++++|..++++|..++
T Consensus 514 lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~amif~~~g~-----~g~sHsp~E~v~~edL~~g~~vl~~~l 585 (591)
T PRK13799 514 LMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAMLFTRCGN-----AGISHNPLESMTADDMELSADAFLDFL 585 (591)
T ss_pred HHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEEEEEecCC-----CCCCCCccccCCHHHHHHHHHHHHHHH
Confidence 999999988764 76643 3467889999999998887777665432 246899999999999999999999999
Q ss_pred HHHhc
Q 036756 310 ISYLD 314 (321)
Q Consensus 310 ~~~~~ 314 (321)
.+|.+
T Consensus 586 ~~l~~ 590 (591)
T PRK13799 586 NNFAE 590 (591)
T ss_pred HHHhh
Confidence 98864
No 57
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=1.6e-33 Score=264.72 Aligned_cols=292 Identities=13% Similarity=0.085 Sum_probs=193.6
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEE--EecCCCCCEEEEEeccccCCCCC-CCCCCcccc-CCCceecC---CchHHH
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVA--SVGSGVQPWFGLRADMDALPIQE-MVEWEHKSK-NNGKMHAC---GHDVHT 73 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia--~~~~~~~~~i~l~~H~DtVp~~~-~~~~pf~~~-~~G~~~g~---g~kg~~ 73 (321)
+++||.++|+++|++++.. .|+++ .++ +..|+|+|+|||||||+++ |+..||+.. ++|++||| ||||++
T Consensus 36 ~~~~l~~~~~~~g~~~~~~---~~~~~~~~~~-~~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~l 111 (447)
T TIGR01887 36 ALDKFLELAKRDGFTTENV---DNYAGYAEYG-QGEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPT 111 (447)
T ss_pred HHHHHHHHHHHcCceEEEe---cCceEEEEeC-CCCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHH
Confidence 3679999999999998743 34433 333 2348999999999999864 445689864 67999985 589999
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCCCC----Ccce---EEEeccC----------------
Q 036756 74 TMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGALE----KFQG---IFGLHVA---------------- 129 (321)
Q Consensus 74 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~~~----~~d~---~i~~~~~---------------- 129 (321)
++++.|++.|++.+..++++|.|+|++|||+++ |++++++..... .+|+ ++..+++
T Consensus 112 aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~ 191 (447)
T TIGR01887 112 IAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAPDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDV 191 (447)
T ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCce
Confidence 999999999998877789999999999999984 888888763211 1222 3332321
Q ss_pred ------CCCCceeE------Eee-c-------------------cccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHH
Q 036756 130 ------PELPTGTI------GSR-P-------------------GPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASF 177 (321)
Q Consensus 130 ------~~~p~g~~------~~~-~-------------------g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~ 177 (321)
.++|++.+ .+. . |...++..+++|+++|+++|||.|++|.|||..|++
T Consensus 192 ~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~ 271 (447)
T TIGR01887 192 VLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFEVNDGTATITLEGKSAHGSAPEKGINAATYLAL 271 (447)
T ss_pred eEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEEecCCEEEEEEEeeecccCCCccCccHHHHHHH
Confidence 13344432 111 0 111122228999999999999999999999999999
Q ss_pred HHHHHH--Hhh----c-----------------ccCC-----------------Cch--------------HH-HHHHHH
Q 036756 178 AILALQ--QIV----S-----------------RETD-----------------PLE--------------AR-VIEMQA 202 (321)
Q Consensus 178 ~i~~l~--~~~----~-----------------~~~~-----------------p~~--------------~~-~i~~~~ 202 (321)
++.+++ +.. . ...+ |.. .. +++.+.
T Consensus 272 ~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I~~g~p~~~~~~~d~R~~p~~~~e~~~~~i~ 351 (447)
T TIGR01887 272 FLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVIDYENAEAGLIGLNVRYPVGNDPDTMLKNEL 351 (447)
T ss_pred HHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEEEEeCCcEEEEEEEEecCCCCCHHHHHHHHH
Confidence 999986 210 0 0000 100 00 223332
Q ss_pred HHhCCeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCC
Q 036756 203 AVHQCSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETL 280 (321)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~ 280 (321)
....-..++.. ...+++. ..+.++++.+++++++.+|.++. .....+++|++++ |.+ +.+|+.. |
T Consensus 352 ~~~~~~~~~~~----~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~~ggtda~~~----~~~-i~~Gp~~--p 418 (447)
T TIGR01887 352 AKESGIVEVTE----NGYLKPLYVPKDDPLVQTLMKVYEKQTGDEGT--PVAIGGGTYARLM----ENG-VAFGALF--P 418 (447)
T ss_pred HHhhCcEEEEE----ccCCCCeEECCCCHHHHHHHHHHHHHhCCCCC--eeEecchhhhhhC----CCc-EEeCCCC--C
Confidence 22111122222 1112232 33568999999999998776543 2335667887764 322 2346432 4
Q ss_pred CCCCCCCCCCCcCCCCcHHHHHHHHHHHH
Q 036756 281 KPVVRLHSPYLVIDEDVLPIGAALHAAVA 309 (321)
Q Consensus 281 g~~~~~H~~~E~v~~~~l~~~~~~~~~~~ 309 (321)
|...++|++|||+++++|..++++|.+++
T Consensus 419 G~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 419 GEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred CCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 65678999999999999999999998763
No 58
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.8e-32 Score=265.31 Aligned_cols=285 Identities=16% Similarity=0.157 Sum_probs=211.7
Q ss_pred ChHHHHHHHHhCCC-ceeccCCCceEEEEecCC-C-CCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHH
Q 036756 1 AGQLVRNELASLGI-EYTWPFAKTGIVASVGSG-V-QPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLL 77 (321)
Q Consensus 1 ~a~~l~~~L~~~G~-~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l 77 (321)
+++||.+||+++|+ +++.+ ..+|+++++++. + .|.|++.+||||||.+ |+. |.+++++++|
T Consensus 216 ~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~gsHlDTV~~g------------G~~---DG~~Gv~a~l 279 (591)
T PRK13590 216 CAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLTGSHYDTVRNG------------GKY---DGRLGIFVPM 279 (591)
T ss_pred HHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEEecccccCCCC------------CCc---ccHHHHHHHH
Confidence 46899999999999 88765 468999999764 3 4899999999999853 444 4458999999
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCcc------chhhh--------HHH---------------cCC----C-------
Q 036756 78 GAARLLKQRKDRLKGTVKLVFQPGEESY------GGAYH--------MIK---------------EGA----L------- 117 (321)
Q Consensus 78 ~a~~~l~~~~~~~~~~i~~~~~~dEE~g------~G~~~--------l~~---------------~g~----~------- 117 (321)
.+++.|++.+..++++|.|+++.+||+. .|++. +++ .|+ +
T Consensus 280 ea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~ 359 (591)
T PRK13590 280 ACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDP 359 (591)
T ss_pred HHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCC
Confidence 9999999998888899999999999972 26664 222 111 0
Q ss_pred CCcceEEEeccCCCC---Cce-eEEeeccccccceeEEEEEEEecCCCCCC-CCC-CCCHHHHHHHHHHHHHHhhcccC-
Q 036756 118 EKFQGIFGLHVAPEL---PTG-TIGSRPGPMLAGSMRFLAVIEGKGGHAAM-PHA-TRDPVLAASFAILALQQIVSRET- 190 (321)
Q Consensus 118 ~~~d~~i~~~~~~~~---p~g-~~~~~~g~~~~g~~~~~i~v~G~~aHss~-p~~-g~nAi~~~~~~i~~l~~~~~~~~- 190 (321)
+++++.+.+|.+++- ..| .+.+. ..++|..+++|+++|+++|+|. |+. +.|||..+++++..++++.....
T Consensus 360 ~~~~a~~ElHiEqg~~Le~~~~~~gvV--~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~~~~ 437 (591)
T PRK13590 360 ARYLGFVEVHIEQGPVLNELDLPLGIV--TSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQDGD 437 (591)
T ss_pred CCccEEEEEEeCCCHHHHHCCCceEEE--eeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhcCCC
Confidence 134567788876430 011 12222 2468999999999999999995 654 78999999999999987632110
Q ss_pred ---------------C--CchH-----------H-----------HHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHH
Q 036756 191 ---------------D--PLEA-----------R-----------VIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMY 231 (321)
Q Consensus 191 ---------------~--p~~~-----------~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (321)
| |... . .++.+++.++++++++. ....++..++++++
T Consensus 438 ~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~----~~~~~~~~~d~~lv 513 (591)
T PRK13590 438 SVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEE----TMRAAAAPSAPAWQ 513 (591)
T ss_pred cEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----eecCCCcCCCHHHH
Confidence 0 1000 0 34445556788888876 34567788899999
Q ss_pred HHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHH
Q 036756 232 EHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAIS 311 (321)
Q Consensus 232 ~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~ 311 (321)
+.+++++++. |.... ..++++++|+++|+..+|+.++| |++. ..+.+|+++||+++++|..++++|..++.+
T Consensus 514 ~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~mif-gpg~----~~g~sH~p~E~v~~edL~~g~~vl~~ll~~ 585 (591)
T PRK13590 514 QRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAMLF-VRGE----NAGISHNPLESSTADDMQLAVQAFQHLLDQ 585 (591)
T ss_pred HHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEEEE-EeeC----CCCCCCCCccCCCHHHHHHHHHHHHHHHHH
Confidence 9999999885 76643 35678999999999988866654 3321 125689999999999999999999999999
Q ss_pred Hhcc
Q 036756 312 YLDD 315 (321)
Q Consensus 312 ~~~~ 315 (321)
++.+
T Consensus 586 l~~~ 589 (591)
T PRK13590 586 LAAE 589 (591)
T ss_pred Hhhc
Confidence 8754
No 59
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=4.2e-33 Score=261.35 Aligned_cols=297 Identities=20% Similarity=0.204 Sum_probs=201.9
Q ss_pred ChHHHHHHHHhCCCceecc--CCCceEEEEecCCCCCEEEEEeccccCCCCC--CCCCCccc-cCCCceecCC---chHH
Q 036756 1 AGQLVRNELASLGIEYTWP--FAKTGIVASVGSGVQPWFGLRADMDALPIQE--MVEWEHKS-KNNGKMHACG---HDVH 72 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~--~~~~pf~~-~~~G~~~g~g---~kg~ 72 (321)
+++|++++|+++||+++.. .++.|+++.++. ..++|+|+|||||||+++ |+.+||.. +++|++|||| |||+
T Consensus 29 ~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~-~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg 107 (438)
T PRK08554 29 CPKFIKDTLESWGIESELIEKDGYYAVYGEIGE-GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGN 107 (438)
T ss_pred HHHHHHHHHHHCCCeEEEEecCCceEEEEEeCC-CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcccchHH
Confidence 3689999999999997643 245799999853 347899999999999864 45678986 4689999965 8999
Q ss_pred HHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHcCC--CCCcceEEEeccCCCCCc----eeEE--ee---
Q 036756 73 TTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKEGA--LEKFQGIFGLHVAPELPT----GTIG--SR--- 140 (321)
Q Consensus 73 ~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~g~--~~~~d~~i~~~~~~~~p~----g~~~--~~--- 140 (321)
++++|+|++.|++. .++++|.|+|++|||+++ ++.++++... ..++|++|+.|++...+. +.+. +.
T Consensus 108 ~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~~~~~~~~~kg~~~~~~~~~ 185 (438)
T PRK08554 108 VASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIGMKPIIRRRKGFGVTIRVPS 185 (438)
T ss_pred HHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCCCcchhhcCCceEEEEEecc
Confidence 99999999999864 377899999999999874 4556655311 125799999886432211 0000 00
Q ss_pred ccccccce---eEEEEEEEecC-CCCCCCCCCCC--HHHHHHHHHHHHHHhhc---c---------------------cC
Q 036756 141 PGPMLAGS---MRFLAVIEGKG-GHAAMPHATRD--PVLAASFAILALQQIVS---R---------------------ET 190 (321)
Q Consensus 141 ~g~~~~g~---~~~~i~v~G~~-aHss~p~~g~n--Ai~~~~~~i~~l~~~~~---~---------------------~~ 190 (321)
.+..-.|. .++.+++.|.+ +|++.|..|.| |+..+++++.++..+.. . ..
T Consensus 186 ~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~ 265 (438)
T PRK08554 186 EKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVLAVSLEGKFLKGNVVPGEVTLTYLEPGEGE 265 (438)
T ss_pred cccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCceEEEEeeeeeecCcccceeEEEEecCCCCc
Confidence 00000122 35666666765 99998766665 58878777776653210 0 00
Q ss_pred -----------------------------------C--------------------CchHH-HHHHHHH---H--hCCeE
Q 036756 191 -----------------------------------D--------------------PLEAR-VIEMQAA---V--HQCSA 209 (321)
Q Consensus 191 -----------------------------------~--------------------p~~~~-~i~~~~~---~--~~~~~ 209 (321)
. |.+.. +.+.+.+ . .++++
T Consensus 266 n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~~~~e~v~~~i~~~~~~~~~~~~~ 345 (438)
T PRK08554 266 EVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMSYSKEDIERTLKEVLEFNLPEAEV 345 (438)
T ss_pred cccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEEecCCCHHHHHHHHHHHhhccCCCceE
Confidence 0 10000 2233322 1 23455
Q ss_pred EEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCC
Q 036756 210 TLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHS 288 (321)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~ 288 (321)
+++... ....+.+..++++++.+++++++. |.++. +...+|+||+++++. .+|++.+ |+.. .++|+
T Consensus 346 ~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~~--~~~~~GgtDa~~~~~~Gip~v~~--Gp~~------~~~H~ 412 (438)
T PRK08554 346 EIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDAE--PVEGPGASDSRYFTPYGVKAIDF--GPKG------GNIHG 412 (438)
T ss_pred EEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCcE--EEecCCchHHHHHHhcCCCceEE--CCCC------CCCCC
Confidence 655411 122233456789999999999885 86643 345788999999976 4999875 5422 47899
Q ss_pred CCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 289 PYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 289 ~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
+|||+++++|.+++++|.+++.+|+
T Consensus 413 ~~E~v~i~~l~~~~~i~~~~i~~l~ 437 (438)
T PRK08554 413 PNEYVEIDSLKKMPEVYKRIALRLL 437 (438)
T ss_pred CcceEEHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998886
No 60
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=6.7e-33 Score=263.38 Aligned_cols=293 Identities=15% Similarity=0.160 Sum_probs=200.1
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC----CCCEEEEEeccccCCCCC------CCCCCccc-cCCCceecC--
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG----VQPWFGLRADMDALPIQE------MVEWEHKS-KNNGKMHAC-- 67 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtVp~~~------~~~~pf~~-~~~G~~~g~-- 67 (321)
+++||+++|+++|++++++. ..|+++++++. ..|+|+|.|||||||.+. ++..||.. .++|++||+
T Consensus 26 ~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~ 104 (477)
T TIGR01893 26 VSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGT 104 (477)
T ss_pred HHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCc
Confidence 36899999999999987653 57999998542 248999999999999864 23347875 468999974
Q ss_pred ----CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCC------CCCcee
Q 036756 68 ----GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAP------ELPTGT 136 (321)
Q Consensus 68 ----g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~------~~p~g~ 136 (321)
|||++++++|.+++. . ...+++|.++|++|||++ .|++++..+.. +.++++..++.. +.+.+.
T Consensus 105 ~lg~D~k~gva~~l~~~~~---~-~~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~~~~~~~d~~~~~~~~~g~~~~~ 178 (477)
T TIGR01893 105 TLGADNGIGVAMGLAILED---N-NLKHPPLELLFTVDEETGMDGALGLDENWL--SGKILINIDSEEEGEFIVGCAGGR 178 (477)
T ss_pred cccccccHHHHHHHHHHhc---C-CCCCCCEEEEEEeccccCchhhhhcChhhc--CCcEEEEecCCCCCeEEEECCCCe
Confidence 567899888887664 2 235679999999999987 59999976543 345566554211 011111
Q ss_pred -E----EeeccccccceeEEEEEEEe-cCCCCC-CCCCC-CCHHHHHHHHHHHHHHhhccc---------CC--Cch---
Q 036756 137 -I----GSRPGPMLAGSMRFLAVIEG-KGGHAA-MPHAT-RDPVLAASFAILALQQIVSRE---------TD--PLE--- 194 (321)
Q Consensus 137 -~----~~~~g~~~~g~~~~~i~v~G-~~aHss-~p~~g-~nAi~~~~~~i~~l~~~~~~~---------~~--p~~--- 194 (321)
+ .+.....++|..+++|+++| +++||+ .|+.+ .|||..|+++|.++++..... .| |..
T Consensus 179 ~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~~~~v~~~~gg~~~N~ip~~~~~ 258 (477)
T TIGR01893 179 NVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENLNFRLSDIKGGSKRNAIPREAKA 258 (477)
T ss_pred eEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcCCeEEEEEeCCCcccccCCceEE
Confidence 0 00001124789999999999 999998 68888 599999999999998763211 00 100
Q ss_pred --------HH----HHH----HHHHH-----hC-----------------------------------------------
Q 036756 195 --------AR----VIE----MQAAV-----HQ----------------------------------------------- 206 (321)
Q Consensus 195 --------~~----~i~----~~~~~-----~~----------------------------------------------- 206 (321)
.. .++ .+.+. .+
T Consensus 259 ~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 338 (477)
T TIGR01893 259 LIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVES 338 (477)
T ss_pred EEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEe
Confidence 00 000 00000 00
Q ss_pred -----------------------------------------CeEEEEEeccccCCCCCc--cCCHHHHHHHHHHHHhhcC
Q 036756 207 -----------------------------------------CSATLDFMEEKLRPYPAT--VNDEEMYEHAKKVGTSLLG 243 (321)
Q Consensus 207 -----------------------------------------~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~g 243 (321)
..++++. ...+|++ ..++++++.+.+++++++|
T Consensus 339 t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~----~~~~~p~~~~~d~plv~~l~~a~~~~~g 414 (477)
T TIGR01893 339 SLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEV----SAGYPSWQPDPQSNLLDTARKVYSEMFG 414 (477)
T ss_pred eeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEE----ecCCCcccCCCCCHHHHHHHHHHHHHHC
Confidence 1123332 2234443 3467899999999999888
Q ss_pred CcceeccCCCcCCCcHHHHHHHhhhe-EEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 244 EANVHLLPMAMGAEDFSFYSQKMAAA-LFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 244 ~~~~~~~~~~~~~~D~~~~~~~~p~~-~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
.++. ....+|++|.++|....|.+ .+.+|+.. .++|++||++++++|.+++++|.+++.+|
T Consensus 415 ~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~------~~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 415 EDPE--VKVIHAGLECGIISSKIPDIDMISIGPNI------YDPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred CCCe--EEEeecCccHHHHHhhCCCceEEEeCCCC------CCCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 7653 34567889999998754543 23456532 57999999999999999999999998654
No 61
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=3.7e-32 Score=256.80 Aligned_cols=286 Identities=15% Similarity=0.169 Sum_probs=202.9
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecC--C--CCCEEEEEeccccCCCCC------CCCCCccc-cCCCceecC--
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGS--G--VQPWFGLRADMDALPIQE------MVEWEHKS-KNNGKMHAC-- 67 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~--~--~~~~i~l~~H~DtVp~~~------~~~~pf~~-~~~G~~~g~-- 67 (321)
+++||.++|+++|++++.+ ..+|+++.+++ + ..|.|+|.|||||||+++ ++.+||.. +++|++||+
T Consensus 32 ~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt 110 (485)
T PRK15026 32 LAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGT 110 (485)
T ss_pred HHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCc
Confidence 3689999999999998765 35799988743 2 348999999999999864 23458875 467899763
Q ss_pred ----CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEe-ec
Q 036756 68 ----GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGS-RP 141 (321)
Q Consensus 68 ----g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~-~~ 141 (321)
|||++++++|.++ ++.+. .+++|.++|++|||.| .|++.+... .+ ++|++|.++++. .|.+.+ ..
T Consensus 111 ~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~~-~~-~~~~~i~~e~~~---~g~l~~g~~ 181 (485)
T PRK15026 111 TLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQSN-WL-QADILINTDSEE---EGEIYMGCA 181 (485)
T ss_pred cccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhhc-cC-CcCEEEEeCCCC---CCeEEEeCC
Confidence 5678898887765 33333 4789999999999998 499998653 33 579999998742 233211 10
Q ss_pred c-------------ccccceeEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHHHhhc-----------ccCCCch
Q 036756 142 G-------------PMLAGSMRFLAVIEG-KGGHAA-MPHATR-DPVLAASFAILALQQIVS-----------RETDPLE 194 (321)
Q Consensus 142 g-------------~~~~g~~~~~i~v~G-~~aHss-~p~~g~-nAi~~~~~~i~~l~~~~~-----------~~~~p~~ 194 (321)
| ...+|..+|+|+++| +++||+ .|++|+ |||..|+++|.++..-.. .+.-|..
T Consensus 182 G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~~~~~~~v~~i~GG~~~NaIp~~ 261 (485)
T PRK15026 182 GGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPRE 261 (485)
T ss_pred CcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhHhhCCeEEEEEeCCCccCCCCCC
Confidence 1 112577899999999 999999 899999 999999999998652110 0000100
Q ss_pred HH------------------------------------------------------------------------------
Q 036756 195 AR------------------------------------------------------------------------------ 196 (321)
Q Consensus 195 ~~------------------------------------------------------------------------------ 196 (321)
..
T Consensus 262 a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~ 341 (485)
T PRK15026 262 AFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGV 341 (485)
T ss_pred cEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEeccCCCCe
Confidence 00
Q ss_pred ---------------------------------H---HHHHHHHhCCeEEEEEeccccCCCCCccC--CHHHHHHHHHHH
Q 036756 197 ---------------------------------V---IEMQAAVHQCSATLDFMEEKLRPYPATVN--DEEMYEHAKKVG 238 (321)
Q Consensus 197 ---------------------------------~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~ 238 (321)
+ ++.+++..+.++ +. ...||++.. ++++++.+.+++
T Consensus 342 v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~~--~~----~~~~p~w~~~~ds~lv~~l~~~y 415 (485)
T PRK15026 342 VETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKT--EA----KGAYPGWQPDANSPVMHLVRETY 415 (485)
T ss_pred EEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcEE--EE----eCCCCCCCCCCCCHHHHHHHHHH
Confidence 1 222233344433 33 446777654 468999999999
Q ss_pred HhhcCCcceeccCCCcCCCcHHHHHHH---hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 239 TSLLGEANVHLLPMAMGAEDFSFYSQK---MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 239 ~~~~g~~~~~~~~~~~~~~D~~~~~~~---~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
++++|.++. .....+++|.+.|... +|++. +||.. ..+|++||+++++++....+++..++.++
T Consensus 416 ~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~Vs--fGP~~------~~~HspdE~v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 416 QRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVS--IGPTI------TGPHSPDEQVHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred HHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEE--ECCCC------CCCCCCCcEEEhHHHHHHHHHHHHHHHhh
Confidence 999987653 2346789999999975 45554 46543 46899999999999988777777777766
No 62
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-31 Score=234.50 Aligned_cols=302 Identities=18% Similarity=0.177 Sum_probs=219.3
Q ss_pred ChHHHHHHHHhCCCceec---cCCCceEEEEecCC-C-CCEEEEEeccccCCCCCC--CCCCcccc--CCCceecCC---
Q 036756 1 AGQLVRNELASLGIEYTW---PFAKTGIVASVGSG-V-QPWFGLRADMDALPIQEM--VEWEHKSK--NNGKMHACG--- 68 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~---~~~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~~--~~~pf~~~--~~G~~~g~g--- 68 (321)
+++|+.++.+++|..++. .++..+++.+|.|. + -|+|+|++|+||||+..+ +..||+.. ++|.+||||
T Consensus 50 ~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD 129 (420)
T KOG2275|consen 50 CADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQD 129 (420)
T ss_pred HHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcccCccCCccccccCCCcEEeccccc
Confidence 478999999999997754 24678999999775 3 499999999999998543 44578753 689999865
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeecccccc
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY--GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLA 146 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g--~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~ 146 (321)
||..++++|.|++.|+..+.+++++|.+.|++|||++ .|++.+.+...+.+....+.++-+..-+.. + ...+.+++
T Consensus 130 ~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~~~filDEG~~se~d-~-~~vfyaEk 207 (420)
T KOG2275|consen 130 MKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLNLGFILDEGGATEND-F-ATVFYAEK 207 (420)
T ss_pred hHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccceeEEecCCCCCccc-c-eeEEEEee
Confidence 7899999999999999999999999999999999987 499999884445455555555422111122 2 34456789
Q ss_pred ceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccC-----CC-------------------------chHH
Q 036756 147 GSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRET-----DP-------------------------LEAR 196 (321)
Q Consensus 147 g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~-----~p-------------------------~~~~ 196 (321)
|..|++++++|+++|||.|.. ..|+.++.+++..+.++..+.. +| ....
T Consensus 208 g~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~~vtT~Nv~~i~GGv~~N~~P~~~e 286 (420)
T KOG2275|consen 208 GPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLALGDVTTINVGIINGGVQSNVLPETFE 286 (420)
T ss_pred ceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceeccceeEEeeeeeecccccCcCchhhe
Confidence 999999999999999997532 4788889999988877652111 11 0000
Q ss_pred ------------------HH-HHHHHHhCCeEEEEEeccccCCCCC---ccCCHHHHHHHHHHHHhhcCCcceeccCCCc
Q 036756 197 ------------------VI-EMQAAVHQCSATLDFMEEKLRPYPA---TVNDEEMYEHAKKVGTSLLGEANVHLLPMAM 254 (321)
Q Consensus 197 ------------------~i-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 254 (321)
.+ +.+++.++--+++++.......+++ ...+.+.+..++.+.++. +.... +..+.
T Consensus 287 a~~dirv~~~~d~~~i~~~l~~~w~~~~~eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~~~~-~~k~~--~~i~~ 363 (420)
T KOG2275|consen 287 AAFDIRVRPHVDVKAIRDQLEDEWAEEAGEGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGALKDE-GGKGY--PEIGP 363 (420)
T ss_pred eeeeeEeccCCCHHHHHHHHHHHhhhhcCCceEEeccCcccCCCCCCCCCCCCChHHHHHHHHHHHh-cCccc--eeecc
Confidence 22 5566666665666653220113333 334557899999999887 54432 45678
Q ss_pred CCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHHh
Q 036756 255 GAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISYL 313 (321)
Q Consensus 255 ~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~~ 313 (321)
|++|.+++... +|..-|.... + ..-..|.-||++..+...+++++|..++..+.
T Consensus 364 gstdsr~~rn~gvp~~~fsp~~-n----t~~~~H~hnE~l~~~~~l~gi~~~~~~i~~~~ 418 (420)
T KOG2275|consen 364 GSTDSRHIRNEGVPAIGFSPII-N----TPMLLHDHNEFLNEKVFLRGIEIYYTIIVNLA 418 (420)
T ss_pred cccccchhhhcCcchhcccccc-c----ccceecchhhhhCchhhhhhhhHHHHHHHhhc
Confidence 99999999875 8877654332 2 24689999999999999999999999877654
No 63
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.89 E-value=6e-23 Score=171.67 Aligned_cols=175 Identities=25% Similarity=0.293 Sum_probs=131.6
Q ss_pred EEEeccccCCC-CCCCCCCccc-cCCCceecCC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc--hhhh
Q 036756 38 GLRADMDALPI-QEMVEWEHKS-KNNGKMHACG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG--GAYH 110 (321)
Q Consensus 38 ~l~~H~DtVp~-~~~~~~pf~~-~~~G~~~g~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~--G~~~ 110 (321)
+|++||||||. ..+...||.. +++|++|||| +|+++++++.|++.|++.+..++++|.|+|+++||+++ |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999993 1234457864 5789999987 47999999999999998888999999999999999985 9999
Q ss_pred HHHcCC--CCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc
Q 036756 111 MIKEGA--LEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSR 188 (321)
Q Consensus 111 l~~~g~--~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~ 188 (321)
+++++. ..++|+++..+++ .. +...
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~-----~~----------~~~~-------------------------------------- 107 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPT-----GK----------GGVG-------------------------------------- 107 (189)
T ss_dssp HHHHCEEEEEEESEEEECECE-----TT----------SEEE--------------------------------------
T ss_pred hhhhccccccccccccccccc-----cc----------cccc--------------------------------------
Confidence 999852 1246777765431 10 1000
Q ss_pred cCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH----
Q 036756 189 ETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ---- 264 (321)
Q Consensus 189 ~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~---- 264 (321)
..+++++++.++++++++.+... ....+.+++|++++..
T Consensus 108 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~ 150 (189)
T PF01546_consen 108 -----------------------------------SDNDPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGL 150 (189)
T ss_dssp -----------------------------------HCTCHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHT
T ss_pred -----------------------------------ccccHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhcc
Confidence 34577799999999999854222 2356789999999994
Q ss_pred HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHH
Q 036756 265 KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAI 310 (321)
Q Consensus 265 ~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~ 310 (321)
.+|++ ++|+. . .++|++||+++++++.+++++|++++.
T Consensus 151 ~~~~i--~~G~~-----~-~~~H~~~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 151 GIPAI--GFGPG-----G-SNAHTPDEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp TEEEE--EEESC-----E-ESTTSTT-EEEHHHHHHHHHHHHHHHH
T ss_pred cccee--eeCCC-----C-CCCCCCCcEecHHHHHHHHHHHHHHHh
Confidence 35555 44542 2 689999999999999999999999886
No 64
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.88 E-value=4.9e-21 Score=168.58 Aligned_cols=181 Identities=19% Similarity=0.200 Sum_probs=130.5
Q ss_pred ChHHHHHHHHhCCCceecc-C------------CCceEEEEecCCC-CCEEEEEeccccCCCCCCCCC---Cccc-cCCC
Q 036756 1 AGQLVRNELASLGIEYTWP-F------------AKTGIVASVGSGV-QPWFGLRADMDALPIQEMVEW---EHKS-KNNG 62 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~-~------------~~~nvia~~~~~~-~~~i~l~~H~DtVp~~~~~~~---pf~~-~~~G 62 (321)
+++|+++.|.++|-.++.. . ..+-+.++++..+ .+++++.||+||+|+..+..| ||.. +.+|
T Consensus 44 m~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~G 123 (473)
T KOG2276|consen 44 MADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDG 123 (473)
T ss_pred HHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECC
Confidence 3689999999999766531 1 1345667776654 588999999999998755445 8874 5789
Q ss_pred ceecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc-hhhhHHHc---CCCCCcceEEEeccCCCCCce
Q 036756 63 KMHACGH---DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG-GAYHMIKE---GALEKFQGIFGLHVAPELPTG 135 (321)
Q Consensus 63 ~~~g~g~---kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~-G~~~l~~~---g~~~~~d~~i~~~~~~~~p~g 135 (321)
+++|||. ||++++.+.|++++++.+.+++-+|.|+|..-||+|+ |-..+++. .++.++|++...+.-- .-+.
T Consensus 124 kL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyW-lg~k 202 (473)
T KOG2276|consen 124 KLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEGMEESGSEGLDELIEKEKDKFFKDVDFVCISDNYW-LGTK 202 (473)
T ss_pred EEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEechhccCccHHHHHHHHhhhhhccCCEEEeeCcee-ccCC
Confidence 9999874 7999999999999999999999999999999999985 77777653 3455788877754311 0011
Q ss_pred eEEeeccccccceeEEEEEEEe--cCCCCCCC-CCCCCHHHHHHHHHHHHHH
Q 036756 136 TIGSRPGPMLAGSMRFLAVIEG--KGGHAAMP-HATRDPVLAASFAILALQQ 184 (321)
Q Consensus 136 ~~~~~~g~~~~g~~~~~i~v~G--~~aHss~p-~~g~nAi~~~~~~i~~l~~ 184 (321)
.-++..| .+|...|.++|+| +--||+-. -.-.-|+..+..++..|..
T Consensus 203 kPcltyG--lRG~~yf~i~v~g~~~DlHSGvfGG~~hE~m~dL~~~ms~Lv~ 252 (473)
T KOG2276|consen 203 KPCLTYG--LRGVIYFQIEVEGPSKDLHSGVFGGVVHEAMNDLVLVMSSLVD 252 (473)
T ss_pred Ccccccc--cccceeEEEEEeecccccccccccchhHHHHHHHHHHHHHhcC
Confidence 2223333 3599999999999 55799843 2223466666666666543
No 65
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=7.4e-19 Score=160.51 Aligned_cols=288 Identities=19% Similarity=0.160 Sum_probs=203.1
Q ss_pred hHHHHHHHHhCCCce-ecc-------CCC--ce-EEEEecCC-C-CCEEEEEeccccCCCCCC----C------------
Q 036756 2 GQLVRNELASLGIEY-TWP-------FAK--TG-IVASVGSG-V-QPWFGLRADMDALPIQEM----V------------ 52 (321)
Q Consensus 2 a~~l~~~L~~~G~~~-~~~-------~~~--~n-via~~~~~-~-~~~i~l~~H~DtVp~~~~----~------------ 52 (321)
+.|+.+|++.+|+.+ .+. ... .| +.+++++. + -|.+.|.+|+||+|..-. .
T Consensus 28 ~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i 107 (414)
T COG2195 28 APSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNI 107 (414)
T ss_pred ccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccccccccccccCCceeeeccCcchh
Confidence 467888999999887 321 111 22 55666654 2 388999999999962100 0
Q ss_pred ------------CCCcc----c----cCCCc-eecCCchHHHHHHHHHHHHHHhcc-CCCCceEEEEEecCCCcc-chhh
Q 036756 53 ------------EWEHK----S----KNNGK-MHACGHDVHTTMLLGAARLLKQRK-DRLKGTVKLVFQPGEESY-GGAY 109 (321)
Q Consensus 53 ------------~~pf~----~----~~~G~-~~g~g~kg~~aa~l~a~~~l~~~~-~~~~~~i~~~~~~dEE~g-~G~~ 109 (321)
..|.. . ..+|. +-|.|+|++++.++.++..+++.. .-+.++|++.|+++||.+ .|+.
T Consensus 108 ~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~ 187 (414)
T COG2195 108 GLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAA 187 (414)
T ss_pred hhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhh
Confidence 11211 0 01332 246778899999999999998653 456899999999999998 6888
Q ss_pred hHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcc
Q 036756 110 HMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGHAA-MPHATRDPVLAASFAILALQQIVSR 188 (321)
Q Consensus 110 ~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aHss-~p~~g~nAi~~~~~~i~~l~~~~~~ 188 (321)
.+.-.. + ..++.+.++. .+.|.+.... .+...+++++.|+.+|++ .+....||+..+.+++..+......
T Consensus 188 ~~~~a~-f-~a~~ay~iDG---g~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a~~~~i~a~~~a~e~~~~~~~~~~~ 258 (414)
T COG2195 188 NKDVAR-F-LADFAYTLDG---GPVGEIPREA----FNAAAVRATIVGPNVHPGSAKGKMINALLLAAEFILELPLEEVP 258 (414)
T ss_pred hccHHh-h-hcceeEecCC---CccCeeeeec----cchheeeeeeeccCcCccchHHHHhhHHHhhhhhhhcCCccccc
Confidence 776553 3 4678888763 3456554331 357899999999999999 5778899999999988877543211
Q ss_pred cCC---------------Cc-hHH----------------------HHHHHHHHhC--CeEEEEEeccccCCCCCcc--C
Q 036756 189 ETD---------------PL-EAR----------------------VIEMQAAVHQ--CSATLDFMEEKLRPYPATV--N 226 (321)
Q Consensus 189 ~~~---------------p~-~~~----------------------~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~ 226 (321)
+.. .. ... +++..++..+ ..++++. ...||.+. .
T Consensus 259 e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~Yp~~~~~~ 334 (414)
T COG2195 259 ELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEV----KDSYPGWKIKP 334 (414)
T ss_pred ccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEE----eccccCcCCCC
Confidence 100 00 000 3444445555 6777777 56677653 4
Q ss_pred CHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHHH-hhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHH
Q 036756 227 DEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQK-MAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALH 305 (321)
Q Consensus 227 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~-~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~ 305 (321)
++.+++.++++++++ +..+. ..+..|++|.+.++.. .|+.++++|+ . .+.|+++|+|+++++.+..+++
T Consensus 335 ~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~~is~~g~p~~~i~~Gp-~------~n~Hs~~E~v~I~s~ek~~~~l 404 (414)
T COG2195 335 DSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGGVLSFKGLPTPNISTGP-G------ENPHSPDEFVSIESMEKAVQVL 404 (414)
T ss_pred CchHHHHHHHHHHHh-CCCce--EEEeecccchhhhhccCCCCceEeccc-c------cCCCCccceeehHHHHHHHHHH
Confidence 678999999999999 54554 3568899999998875 8888888885 2 7899999999999999999999
Q ss_pred HHHHHHH
Q 036756 306 AAVAISY 312 (321)
Q Consensus 306 ~~~~~~~ 312 (321)
..++..+
T Consensus 405 ~~l~~~~ 411 (414)
T COG2195 405 VELLKLA 411 (414)
T ss_pred HHHHHHh
Confidence 9988765
No 66
>PRK09961 exoaminopeptidase; Provisional
Probab=99.58 E-value=1.3e-13 Score=125.24 Aligned_cols=229 Identities=15% Similarity=0.068 Sum_probs=153.5
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCC----------------CCCC------------
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPI----------------QEMV------------ 52 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~----------------~~~~------------ 52 (321)
++++++++|+++|++++.+ +.+|+++++++.++|+|+|.||||+|+. |...
T Consensus 22 v~~~i~~~l~~~~~~v~~D-~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~ 100 (344)
T PRK09961 22 VRQILLEEADRLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRIT 100 (344)
T ss_pred HHHHHHHHHHhhCCEEEEC-CCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEEeCCCccccccCCCEEEEE
Confidence 3689999999999998764 6789999886544589999999999982 1100
Q ss_pred ----------------CCCc---------cc--------c---------------CCCceec--CCchHHHHHHHHHHHH
Q 036756 53 ----------------EWEH---------KS--------K---------------NNGKMHA--CGHDVHTTMLLGAARL 82 (321)
Q Consensus 53 ----------------~~pf---------~~--------~---------------~~G~~~g--~g~kg~~aa~l~a~~~ 82 (321)
..++ ++ + .++++.| .|.+.++++++.+++.
T Consensus 101 ~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~gkalDnR~g~~~lle~l~~ 180 (344)
T PRK09961 101 TREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRE 180 (344)
T ss_pred eCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEEeechhhHhHHHHHHHHHH
Confidence 0011 00 0 0112222 3456899999999999
Q ss_pred HHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEEEEEEEecCCC
Q 036756 83 LKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRFLAVIEGKGGH 161 (321)
Q Consensus 83 l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~aH 161 (321)
|++. +++.+|+++|+..||.| .|++..... + ++|.+|+++..+.
T Consensus 181 l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~~------------------------------ 225 (344)
T PRK09961 181 LHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTACW------------------------------ 225 (344)
T ss_pred hhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccCC------------------------------
Confidence 9754 57899999999999998 588766543 3 5899999764210
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHh
Q 036756 162 AAMPHATR-DPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMYEHAKKVGTS 240 (321)
Q Consensus 162 ss~p~~g~-nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 240 (321)
.-.|.... +.+ ++ -.|.. +.+ .. .....|+.+++.+++++++
T Consensus 226 ~d~~~~~~~~~~-----------~l------------------g~Gp~--i~~----~D--~~~i~~~~l~~~l~~~A~~ 268 (344)
T PRK09961 226 AKNFDYGAANHR-----------QI------------------GNGPM--LVL----SD--KSLIAPPKLTAWIETVAAE 268 (344)
T ss_pred CCCCCCCCCccc-----------cc------------------CCCce--EEE----cc--CCcCCCHHHHHHHHHHHHH
Confidence 00111000 000 00 01122 233 11 1234588999999999999
Q ss_pred hcCCcceeccCCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHHHHHH
Q 036756 241 LLGEANVHLLPMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAVAISY 312 (321)
Q Consensus 241 ~~g~~~~~~~~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~~~~~ 312 (321)
. +.+.... ....++||++.+.. .+|++.+++|. ..+|+++|+++++++..+++++..++..+
T Consensus 269 ~-~Ip~Q~~-~~~ggGTDa~~~~~~~~Giptv~ig~p~--------ry~Hs~~E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 269 I-GIPLQAD-MFSNGGTDGGAVHLTGTGVPTVVMGPAT--------RHGHCAASIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred c-CCCcEEE-ecCCCcchHHHHHHhCCCCCEEEechhh--------hcccChhheEEHHHHHHHHHHHHHHHHHc
Confidence 7 7665421 22346799997764 49999875542 47999999999999999999999998554
No 67
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.56 E-value=3.2e-14 Score=127.16 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=84.4
Q ss_pred ChHHHHHHHHhCCCceecc-----------C--------CCceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCC
Q 036756 1 AGQLVRNELASLGIEYTWP-----------F--------AKTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNN 61 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~-----------~--------~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~ 61 (321)
+++||+++|+++|++++.. . ...||||.+++...+.|+|.||+|||++....++++....
T Consensus 57 aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~AH~DTV~p~~~~~~~~~~~g- 135 (346)
T PRK10199 57 SADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPQSDADVDANLGG- 135 (346)
T ss_pred HHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEEEcCcCCCCCCCccccCCCC-
Confidence 4799999999999987521 1 1257999997754588999999999974333344443211
Q ss_pred Ccee-cCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHc
Q 036756 62 GKMH-ACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKE 114 (321)
Q Consensus 62 G~~~-g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~ 114 (321)
-... ++|++++++++|.+++.|++. .++.+|.|+++++||.| .|+++++++
T Consensus 136 ~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 136 LTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred cccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 1122 367889999999999999864 46789999999999988 599999986
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.51 E-value=2.1e-12 Score=117.08 Aligned_cols=218 Identities=20% Similarity=0.190 Sum_probs=148.9
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC-CCCEEEEEeccccCCC----------------CC-------------
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG-VQPWFGLRADMDALPI----------------QE------------- 50 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~----------------~~------------- 50 (321)
++++|+++|+++|++++.+ ..+|++|.+.+. .+|+|+|.||||+|.. |.
T Consensus 25 V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G~l~~~~iGG~~~~~l~g~~v~i 103 (343)
T TIGR03106 25 VVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNGRLELVPIGHWSARFAEGARVTI 103 (343)
T ss_pred HHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCCeEEEEecCCCcccceeCCEEEE
Confidence 3689999999999998874 578999988653 4589999999999972 10
Q ss_pred ------------C-C---------------CCC----------------------------cc----ccCCCceec--CC
Q 036756 51 ------------M-V---------------EWE----------------------------HK----SKNNGKMHA--CG 68 (321)
Q Consensus 51 ------------~-~---------------~~p----------------------------f~----~~~~G~~~g--~g 68 (321)
. . .|. |. ...+|+++| .|
T Consensus 104 ~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd~v~~~~~~~~~~~~~i~gr~~D 183 (343)
T TIGR03106 104 FTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGDFVAFDPQPEFLANGFIVSRHLD 183 (343)
T ss_pred EeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCCEEEECCccEEecCCEEEEEecc
Confidence 0 0 000 00 012456665 56
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccchhhhHHHcCCCCCcceE--EEeccCCCCCceeEEeecccccc
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKEGALEKFQGI--FGLHVAPELPTGTIGSRPGPMLA 146 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~g~~~~~d~~--i~~~~~~~~p~g~~~~~~g~~~~ 146 (321)
||+++++++.+++.|++.+..++.+|+++|+++||.|.|+... + .+|.+ |..+.++
T Consensus 184 ~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~gaa~~----i--~pd~a~~i~vd~~~---------------- 241 (343)
T TIGR03106 184 DKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGASHA----L--PPDVAELVSVDNGT---------------- 241 (343)
T ss_pred cHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccchhc----c--cHhhhccEEEEecc----------------
Confidence 8999999999999998776668899999999999998663211 1 34555 5443210
Q ss_pred ceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccC
Q 036756 147 GSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVN 226 (321)
Q Consensus 147 g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (321)
+ .|.. ..+ ..|..+ .+ ... ....
T Consensus 242 ---------------~-~p~~---------------~~l------------------g~Gp~i--~~----~d~--~~~~ 264 (343)
T TIGR03106 242 ---------------V-APGQ---------------NSS------------------EHGVTI--AM----ADS--SGPF 264 (343)
T ss_pred ---------------c-CCCC---------------CcC------------------CCCceE--EE----ecC--CCCC
Confidence 0 2210 000 012222 22 111 2233
Q ss_pred CHHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHH
Q 036756 227 DEEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAA 303 (321)
Q Consensus 227 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~ 303 (321)
++.+.+.+.+++++. +.+.+... ...++||++.+.. .+|+..++++. -..|+ .|.++++++..+++
T Consensus 265 ~~~l~~~l~~~A~~~-~Ip~Q~~~-~~~~gtDa~~~~~~~~Gi~t~~i~iP~--------Ry~Hs-~e~~~~~D~~~~~~ 333 (343)
T TIGR03106 265 DYHLTRKLIRLCQDH-GIPHRRDV-FRYYRSDAASAVEAGHDIRTALVTFGL--------DASHG-YERTHIDALEALAN 333 (343)
T ss_pred CHHHHHHHHHHHHHc-CCCcEEEe-cCCCCChHHHHHHcCCCCCEEEeeccc--------cchhh-hhhccHHHHHHHHH
Confidence 888999999999997 88765322 2346999998764 49998876654 57899 99999999999999
Q ss_pred HHHHHH
Q 036756 304 LHAAVA 309 (321)
Q Consensus 304 ~~~~~~ 309 (321)
++..++
T Consensus 334 Ll~~~~ 339 (343)
T TIGR03106 334 LLVAYA 339 (343)
T ss_pred HHHHHh
Confidence 888776
No 69
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.49 E-value=3.7e-12 Score=115.47 Aligned_cols=226 Identities=15% Similarity=0.117 Sum_probs=154.9
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCC--CCCEEEEEeccccCC----------------CC-------------
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSG--VQPWFGLRADMDALP----------------IQ------------- 49 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp----------------~~------------- 49 (321)
++++++++|++++.+++++ ..+|+++.++++ .+|+|+|.+|||+|+ .|
T Consensus 20 v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~~~~vGG~~~~~l~gq~V~ 98 (350)
T TIGR03107 20 IRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFRVVELGGWNPLVVSSQRFT 98 (350)
T ss_pred HHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEEEEeCCCccccccCCcEEE
Confidence 3689999999999988765 478999988653 358999999999998 01
Q ss_pred ----CCC---------------------C-CCc---------cc--------cC----------------CCceec--CC
Q 036756 50 ----EMV---------------------E-WEH---------KS--------KN----------------NGKMHA--CG 68 (321)
Q Consensus 50 ----~~~---------------------~-~pf---------~~--------~~----------------~G~~~g--~g 68 (321)
+.. . +++ ++ +. ++++.| .|
T Consensus 99 i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~~~~~~~~~~~~i~~kalD 178 (350)
T TIGR03107 99 LFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQTETILTANGKNVISKAWD 178 (350)
T ss_pred EEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEECCCeEEEcCCCEEEEeccc
Confidence 000 0 010 00 00 011222 34
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
.+.++++++.+++.|++. +++.+|+++|++.||.| .||+..... + ++|.+|+++..+. +.
T Consensus 179 dR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~~~---~d----------- 239 (350)
T TIGR03107 179 NRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCSPA---GD----------- 239 (350)
T ss_pred cHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecCCc---CC-----------
Confidence 568999999999999864 57889999999999999 688865443 3 6899999874321 10
Q ss_pred eeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCC
Q 036756 148 SMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVND 227 (321)
Q Consensus 148 ~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (321)
.|... + . ++- .|.. +.+ ... ....+
T Consensus 240 ----------------~~~~~-~---------~---~lg------------------~Gp~--i~~----~D~--~~i~~ 264 (350)
T TIGR03107 240 ----------------IYGDQ-G---------G---KLG------------------EGTL--LRF----FDP--GHIML 264 (350)
T ss_pred ----------------CCCCC-c---------c---ccC------------------CCce--EEE----ecC--CCCCC
Confidence 12110 0 0 110 1112 222 111 23458
Q ss_pred HHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHH--HH-HHhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHH
Q 036756 228 EEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSF--YS-QKMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAAL 304 (321)
Q Consensus 228 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~--~~-~~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~ 304 (321)
+.+.+.+.+.+++. +.+... ....+++|++. ++ ..+|++.++++. ..+|++.|.++++++.+++++
T Consensus 265 ~~l~~~l~~~A~~~-~I~~Q~--~~~~gGtDa~~~~~~~~Gvpt~~i~ip~--------Ry~Hs~~e~i~~~D~~~~~~L 333 (350)
T TIGR03107 265 PRMKDFLLTTAEEA-GIKYQY--YVAKGGTDAGAAHLKNSGVPSTTIGVCA--------RYIHSHQTLYSIDDFLAAQAF 333 (350)
T ss_pred HHHHHHHHHHHHHc-CCCcEE--ecCCCCchHHHHHHhCCCCcEEEEccCc--------ccccChhheeeHHHHHHHHHH
Confidence 88999999999997 877653 33457999994 44 359999876664 579999999999999999999
Q ss_pred HHHHHHHH
Q 036756 305 HAAVAISY 312 (321)
Q Consensus 305 ~~~~~~~~ 312 (321)
+..++.++
T Consensus 334 l~~~i~~l 341 (350)
T TIGR03107 334 LQAIVKKL 341 (350)
T ss_pred HHHHHHhc
Confidence 99998775
No 70
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.49 E-value=5.7e-13 Score=119.17 Aligned_cols=179 Identities=16% Similarity=0.175 Sum_probs=124.9
Q ss_pred hHHHHHHHHhCCCceec-----------c-CCCceEEEEecCC-CCCEEEEEeccccCCCCCC---CCCCccc-------
Q 036756 2 GQLVRNELASLGIEYTW-----------P-FAKTGIVASVGSG-VQPWFGLRADMDALPIQEM---VEWEHKS------- 58 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~-----------~-~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~---~~~pf~~------- 58 (321)
+++|...|.++-+--+. + .++.||+|.++|+ +.++|++.||+|||-..+. .+..|.+
T Consensus 33 ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~ 112 (553)
T COG4187 33 ADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDAL 112 (553)
T ss_pred HHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeeccceeecccccchhhhccCHHHHHHHH
Confidence 57788888877642111 1 1688999999775 4589999999999987543 2222211
Q ss_pred ---------------cCCCceecCC---chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHc--CCC
Q 036756 59 ---------------KNNGKMHACG---HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKE--GAL 117 (321)
Q Consensus 59 ---------------~~~G~~~g~g---~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~--g~~ 117 (321)
..+..+.||| ||+|+|+.|++++.+.+. ...+|||.|+.+||||.- .|++..+.+ ++.
T Consensus 113 i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~ 191 (553)
T COG4187 113 IESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLK 191 (553)
T ss_pred HHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHH
Confidence 0134677765 899999999999999876 579999999999999987 587776543 111
Q ss_pred --CCcce--EEEeccCCCCCce--eEEeeccccccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Q 036756 118 --EKFQG--IFGLHVAPELPTG--TIGSRPGPMLAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQ 183 (321)
Q Consensus 118 --~~~d~--~i~~~~~~~~p~g--~~~~~~g~~~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~ 183 (321)
.++++ +|..++....-.| .-.+-.|+ .|-.-.-.-|.|+..|.+.|..|+||-..+++++.+|+
T Consensus 192 kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGt--iGKLLp~f~vvG~etHvG~~f~Gvnan~maSei~~~le 261 (553)
T COG4187 192 KKFDLEYTAAINLDVTSDQGDGDQGRYVYTGT--IGKLLPFFFVVGCETHVGYPFEGVNANFMASEITRRLE 261 (553)
T ss_pred HhhCceEEEEeccccccCCCCCccceEEEecc--chhhcceeEEEeeccccCCcccCCCHHHHHHHHHHHhh
Confidence 13444 4444432211112 11223343 46677788899999999999999999999999999886
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.9e-11 Score=109.67 Aligned_cols=232 Identities=20% Similarity=0.155 Sum_probs=157.3
Q ss_pred hHHHHHHHHhCCCceeccCCCceEEEEecCCCC-CEEEEEeccccCCC----------------CCCCC-----------
Q 036756 2 GQLVRNELASLGIEYTWPFAKTGIVASVGSGVQ-PWFGLRADMDALPI----------------QEMVE----------- 53 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~-~~i~l~~H~DtVp~----------------~~~~~----------- 53 (321)
.+|+++.|++++.+++.+ +.+|+++++++.++ |.|++.+|||.|-. |.+..
T Consensus 25 r~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~ 103 (355)
T COG1363 25 RDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVLEGQRVTIH 103 (355)
T ss_pred HHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhccCcEEEEE
Confidence 579999999999998764 57899999987444 56999999999851 11000
Q ss_pred ----------------------------CCc---------cc--------cC---------------CCce--ecCCchH
Q 036756 54 ----------------------------WEH---------KS--------KN---------------NGKM--HACGHDV 71 (321)
Q Consensus 54 ----------------------------~pf---------~~--------~~---------------~G~~--~g~g~kg 71 (321)
+++ .+ +. ++++ ++-|.+.
T Consensus 104 t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~skalDdR~ 183 (355)
T COG1363 104 TDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVVSKALDDRA 183 (355)
T ss_pred eCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEEeeeccchH
Confidence 000 00 00 0111 1235568
Q ss_pred HHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeE
Q 036756 72 HTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMR 150 (321)
Q Consensus 72 ~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~ 150 (321)
+++++|.+++.| + +.+++.+++|+|++.||.| +||+..... + ++|++|.++..+ .+.
T Consensus 184 gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~--i-~pd~aiavd~~~---~~d-------------- 241 (355)
T COG1363 184 GVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR--I-KPDIAIAVDVTP---AGD-------------- 241 (355)
T ss_pred hHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc--c-CCCEEEEEeccc---ccC--------------
Confidence 999999999999 4 5689999999999999999 688766544 2 589999976432 111
Q ss_pred EEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHH
Q 036756 151 FLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEM 230 (321)
Q Consensus 151 ~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (321)
.|...... -++ ..+.. +.+ .+. ....++.|
T Consensus 242 -------------~~~~~~~~-----------~~l------------------g~Gp~--i~~----~D~--~~~~~~~l 271 (355)
T COG1363 242 -------------TPGVPKGD-----------VKL------------------GKGPV--IRV----KDA--SGIYHPKL 271 (355)
T ss_pred -------------CCCCcccc-----------ccc------------------CCCCE--EEE----EcC--CCCCCHHH
Confidence 11100000 000 11222 232 121 12338899
Q ss_pred HHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHH
Q 036756 231 YEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAA 307 (321)
Q Consensus 231 ~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~ 307 (321)
.+.+.+.+++. +.+.+.... ..++||++.+.. .+|+..++++. ...|++.|.++++++..+.+++..
T Consensus 272 ~~~L~~~A~~~-~Ip~Q~~v~-~~ggTDA~a~~~~g~gvpta~Igip~--------ry~Hs~~e~~~~~D~~~~~~Ll~~ 341 (355)
T COG1363 272 RKFLLELAEKN-NIPYQVDVS-PGGGTDAGAAHLTGGGVPTALIGIPT--------RYIHSPVEVAHLDDLEATVKLLVA 341 (355)
T ss_pred HHHHHHHHHHc-CCCeEEEec-CCCCccHHHHHHcCCCCceEEEeccc--------ccccCcceeecHHHHHHHHHHHHH
Confidence 99999999997 887654322 338999998875 39999876654 579999999999999999999999
Q ss_pred HHHHHhccc
Q 036756 308 VAISYLDDH 316 (321)
Q Consensus 308 ~~~~~~~~~ 316 (321)
++.++-.+.
T Consensus 342 ~i~~~~~~~ 350 (355)
T COG1363 342 YLESLDRET 350 (355)
T ss_pred HHHhcchhh
Confidence 998875443
No 72
>PRK09864 putative peptidase; Provisional
Probab=99.39 E-value=7.9e-11 Score=106.63 Aligned_cols=228 Identities=16% Similarity=0.088 Sum_probs=152.3
Q ss_pred ChHHHHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccccCCC----------------CCCC------------
Q 036756 1 AGQLVRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMDALPI----------------QEMV------------ 52 (321)
Q Consensus 1 ~a~~l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~----------------~~~~------------ 52 (321)
+++++.++|+.++.+++.+ ..+|+++.. +.++|+|+|.||||.|+. |.+.
T Consensus 22 v~~~l~~~l~~~~dev~~D-~~GNli~~~-g~~~~kvml~AHmDevG~mV~~I~~~G~l~~~~lGG~~~~~l~~q~V~i~ 99 (356)
T PRK09864 22 VRDILINTLEPCVNEITFD-GLGSFVARK-GNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIR 99 (356)
T ss_pred HHHHHHHHHHHhCCEEEEC-CCCCEEEEe-CCCCcEEEEEecccccCEEEEEECCCCeEEEEeCCCcCccccCCCEEEEE
Confidence 3689999999999998764 478999987 333579999999999981 1000
Q ss_pred ---C-----------------------CCc---------cc--------cC---------------CCceec--CCchHH
Q 036756 53 ---E-----------------------WEH---------KS--------KN---------------NGKMHA--CGHDVH 72 (321)
Q Consensus 53 ---~-----------------------~pf---------~~--------~~---------------~G~~~g--~g~kg~ 72 (321)
. .++ ++ +. ++++.| -|.+.+
T Consensus 100 t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~~~~l~~~~i~~kalDnR~g 179 (356)
T PRK09864 100 THKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEANFACWGEDKVVGKALDNRIG 179 (356)
T ss_pred eCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCCcEEEcCCEEEEEeCccHHH
Confidence 0 000 00 00 111112 345689
Q ss_pred HHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccceeEE
Q 036756 73 TTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAGSMRF 151 (321)
Q Consensus 73 ~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g~~~~ 151 (321)
+++++.+++.|++ ++.+|+++|++.||.| .||+..... + +||.+|+++.++. +.
T Consensus 180 ~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~~---~d--------------- 234 (356)
T PRK09864 180 CAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAVA---GD--------------- 234 (356)
T ss_pred HHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEecccC---CC---------------
Confidence 9999999998863 7789999999999999 688876554 3 5899999875321 10
Q ss_pred EEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHH
Q 036756 152 LAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVNDEEMY 231 (321)
Q Consensus 152 ~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (321)
.|.... ... + ..--.|.- +.+ ... ....++.+.
T Consensus 235 ------------~p~~~~------------------~~~-~--------~~lG~Gp~--i~~----~D~--~~i~~~~l~ 267 (356)
T PRK09864 235 ------------VPGIDN------------------IKY-P--------LKLGQGPG--LML----FDK--RYFPNQKLV 267 (356)
T ss_pred ------------CCCCcc------------------ccc-c--------cccCCCCe--EEE----ccC--CccCCHHHH
Confidence 111000 000 0 00001112 222 111 344588899
Q ss_pred HHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHHHHHH
Q 036756 232 EHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAALHAAV 308 (321)
Q Consensus 232 ~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~~~~~ 308 (321)
+.+.+.+++. +.+.+.. ....++||+..+.. .+|++.+.+.. -..|++.|.++++++..+++++..+
T Consensus 268 ~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~i~~~~~Gvpt~~isiP~--------RY~Hs~~e~~~~~D~e~~~~Ll~~~ 337 (356)
T PRK09864 268 AALKSCAAHN-DLPLQFS-TMKTGATDGGRYNVMGGGRPVVALCLPT--------RYLHANSGMISKADYDALLTLIRDF 337 (356)
T ss_pred HHHHHHHHHc-CCCceEE-EcCCCCchHHHHHHhCCCCcEEEEeecc--------CcCCCcceEeEHHHHHHHHHHHHHH
Confidence 9999999997 8776532 22346999998764 49999876654 5789999999999999999999999
Q ss_pred HHHH
Q 036756 309 AISY 312 (321)
Q Consensus 309 ~~~~ 312 (321)
+.++
T Consensus 338 ~~~l 341 (356)
T PRK09864 338 LTTL 341 (356)
T ss_pred HHhc
Confidence 8775
No 73
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.82 E-value=6.7e-08 Score=85.83 Aligned_cols=154 Identities=21% Similarity=0.228 Sum_probs=104.2
Q ss_pred chHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCCCCCcceEEEeccCCCCCceeEEeeccccccc
Q 036756 69 HDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGALEKFQGIFGLHVAPELPTGTIGSRPGPMLAG 147 (321)
Q Consensus 69 ~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~~~~~d~~i~~~~~~~~p~g~~~~~~g~~~~g 147 (321)
...++++++.+++.|++. .++.+|+|+|++.||.| .|++....+ + ++|.+|+++.++. .
T Consensus 135 dR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD~~~a---~------------ 194 (292)
T PF05343_consen 135 DRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVDVTPA---G------------ 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEEEEEE---S------------
T ss_pred chhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEeeecc---C------------
Confidence 348999999999999874 46699999999999998 588877665 2 5899998763210 0
Q ss_pred eeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHhCCeEEEEEeccccCCCCCccCC
Q 036756 148 SMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVSRETDPLEARVIEMQAAVHQCSATLDFMEEKLRPYPATVND 227 (321)
Q Consensus 148 ~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (321)
-.|..... .. ..|--..+.+ ... ....+
T Consensus 195 ---------------d~~~~~~~------------------~~-------------~lG~Gp~i~~----~D~--~~i~~ 222 (292)
T PF05343_consen 195 ---------------DTPGSDEK------------------EQ-------------GLGKGPVIRV----GDS--SMIPN 222 (292)
T ss_dssp ---------------SSTTSTTT------------------TS-------------CTTS-EEEEE----EET--TEESH
T ss_pred ---------------CCCCCchh------------------hc-------------cCCCCcEEEE----ccC--CCCCC
Confidence 01211000 00 0111223443 111 24557
Q ss_pred HHHHHHHHHHHHhhcCCcceeccCCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHHHHHH
Q 036756 228 EEMYEHAKKVGTSLLGEANVHLLPMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPIGAAL 304 (321)
Q Consensus 228 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~~~~~ 304 (321)
+.+.+.+++.+++. +.+.... ....++||++.+.. .+|++.+.++. ...|++.|.++++++..++++
T Consensus 223 ~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~--------ry~Hs~~e~~~~~Di~~~~~L 292 (292)
T PF05343_consen 223 PKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPC--------RYMHSPVEVIDLDDIEATIDL 292 (292)
T ss_dssp HHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEE--------BSTTSTTEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccc--------ccCCCcceEEEHHHHHHHhhC
Confidence 88999999999997 8776532 34578999999875 48998877765 579999999999999998764
No 74
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.36 E-value=1e-06 Score=72.78 Aligned_cols=84 Identities=23% Similarity=0.334 Sum_probs=59.3
Q ss_pred EEEEEeccccCCCCCCCCCCccccCCCceecCCch-HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHH
Q 036756 36 WFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHD-VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIK 113 (321)
Q Consensus 36 ~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~k-g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~ 113 (321)
.|++.+|+|+++ ..... ....|...+ .+++++|..++.|++.+.+++.+|+|+|..+||.+ .|++++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~~--------~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~ 72 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDADG--------SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVE 72 (179)
T ss_dssp EEEEEEE--BES-CCC-T--------CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHH
T ss_pred EEEEEeecCCCC-CcCCC--------cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHH
Confidence 589999999998 22111 112333333 79999999999999877778899999999999988 59999997
Q ss_pred c--CCCCCcceEEEecc
Q 036756 114 E--GALEKFQGIFGLHV 128 (321)
Q Consensus 114 ~--g~~~~~d~~i~~~~ 128 (321)
. ...+++.++|.++.
T Consensus 73 ~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 73 HDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHCHHHHEEEEEEECS
T ss_pred hhhcccccceeEEeccc
Confidence 3 11234567777753
No 75
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=98.34 E-value=4.6e-07 Score=68.58 Aligned_cols=43 Identities=28% Similarity=0.394 Sum_probs=40.4
Q ss_pred ccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q 036756 145 LAGSMRFLAVIEGKGGHAAMPHATRDPVLAASFAILALQQIVS 187 (321)
Q Consensus 145 ~~g~~~~~i~v~G~~aHss~p~~g~nAi~~~~~~i~~l~~~~~ 187 (321)
++|..+++|+++|+++|+|.|+.|+||+..+++++.+|+++..
T Consensus 3 ~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~ 45 (111)
T PF07687_consen 3 HRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEF 45 (111)
T ss_dssp EEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhc
Confidence 5799999999999999999999999999999999999998853
No 76
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.13 E-value=6.3e-06 Score=80.89 Aligned_cols=91 Identities=22% Similarity=0.311 Sum_probs=72.3
Q ss_pred CceEEEEecCC--CC-CEEEEEeccccCCCCCCCCCCccccCCCceecCCch-HHHHHHHHHHHHHHhccCCCCceEEEE
Q 036756 22 KTGIVASVGSG--VQ-PWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHD-VHTTMLLGAARLLKQRKDRLKGTVKLV 97 (321)
Q Consensus 22 ~~nvia~~~~~--~~-~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~k-g~~aa~l~a~~~l~~~~~~~~~~i~~~ 97 (321)
-.|++.++.++ .. -.|++++|.|+||.+ +|.|+| .++|+||+++|.+.+....+..+|+|.
T Consensus 128 i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~---------------~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFL 192 (834)
T KOG2194|consen 128 ISNIVVKISPKNGNDKNALLLNAHFDSVPTG---------------PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFL 192 (834)
T ss_pred eeeEEEecCCCCCCccceeeeeccccccCCC---------------CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEE
Confidence 46899998654 22 479999999999953 344455 578999999999998877789999999
Q ss_pred EecCCCcc-chhhhHHHcCCC-CCcceEEEec
Q 036756 98 FQPGEESY-GGAYHMIKEGAL-EKFQGIFGLH 127 (321)
Q Consensus 98 ~~~dEE~g-~G~~~l~~~g~~-~~~d~~i~~~ 127 (321)
|..+||.+ .|+..++.+... ..+.++|-++
T Consensus 193 fNgaEE~~L~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 193 FNGAEESGLLGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred ecCcccchhhhcccceecChhhhhhheEEecc
Confidence 99999988 599999886553 3467788765
No 77
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.94 E-value=0.0035 Score=59.26 Aligned_cols=49 Identities=31% Similarity=0.262 Sum_probs=40.8
Q ss_pred cCCch-HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-chhhhHHHcCC
Q 036756 66 ACGHD-VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-GGAYHMIKEGA 116 (321)
Q Consensus 66 g~g~k-g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~G~~~l~~~g~ 116 (321)
|...+ .+++++|.+++.|+... ++.+|.|++...||.| .|+.+++..-.
T Consensus 225 GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 225 GADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred CcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 33334 78999999999999764 8899999999999988 59999988643
No 78
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=96.71 E-value=0.0077 Score=51.99 Aligned_cols=102 Identities=22% Similarity=0.324 Sum_probs=72.5
Q ss_pred hHHHHHHHHhCCCceeccC-------C---CceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCc-eecCCch
Q 036756 2 GQLVRNELASLGIEYTWPF-------A---KTGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGK-MHACGHD 70 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~-------~---~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~-~~g~g~k 70 (321)
.+||.+.|+.+|+.++.+. + -.|+|+++.......+++.+|+|+--... +. +.+.|.-
T Consensus 75 r~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk~~p~-----------~~~vgatdsA 143 (338)
T KOG3946|consen 75 RRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSKIFPG-----------GMFVGATDSA 143 (338)
T ss_pred HHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccccCCC-----------cceEeecccc
Confidence 5899999999999887531 1 25899998665457899999999974322 22 2345666
Q ss_pred HHHHHHHHHHHHHHhcc----CCCCceEEEEEecCCCcc-------c--hhhhHHHc
Q 036756 71 VHTTMLLGAARLLKQRK----DRLKGTVKLVFQPGEESY-------G--GAYHMIKE 114 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~----~~~~~~i~~~~~~dEE~g-------~--G~~~l~~~ 114 (321)
..+|+++..++.|.+.- ....-.+.++|.-+||.. + |+|++.+.
T Consensus 144 vpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 144 VPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred ccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 78899999888875321 123457899999999952 1 77777664
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.42 E-value=0.011 Score=58.44 Aligned_cols=77 Identities=23% Similarity=0.217 Sum_probs=57.9
Q ss_pred CceEEEEecCC--CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHHHHH---HhccCCCCceEEE
Q 036756 22 KTGIVASVGSG--VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAARLL---KQRKDRLKGTVKL 96 (321)
Q Consensus 22 ~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~~~l---~~~~~~~~~~i~~ 96 (321)
-.|+++++.|. +..-|++.+|-|..-.| +.|...|++.++..++.+ ++.+.+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~G----------------a~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFG----------------AIDPNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccC----------------CcCCCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 36999999873 67899999999988532 122335567676666654 4566789999999
Q ss_pred EEecCCCccc-hhhhHHHc
Q 036756 97 VFQPGEESYG-GAYHMIKE 114 (321)
Q Consensus 97 ~~~~dEE~g~-G~~~l~~~ 114 (321)
+.+.+||.|. |+-.++++
T Consensus 402 ~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EEccchhccccccHHHHHH
Confidence 9999999984 88877764
No 80
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=96.17 E-value=0.035 Score=47.76 Aligned_cols=68 Identities=22% Similarity=0.228 Sum_probs=51.1
Q ss_pred CEEEEEeccccCCCCCCCCCCccccCCCceecCCch-HHHHHHHHHHHHHHhc---cCCCCceEEEEEecCCCcc-chhh
Q 036756 35 PWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHD-VHTTMLLGAARLLKQR---KDRLKGTVKLVFQPGEESY-GGAY 109 (321)
Q Consensus 35 ~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~k-g~~aa~l~a~~~l~~~---~~~~~~~i~~~~~~dEE~g-~G~~ 109 (321)
|.|++.+.||+.-.- ++...|.+.. .+++++|+++++|.+. ...++.+|.|+|..+|-.+ -|++
T Consensus 1 ~iIlv~armDs~s~F-----------~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~ 69 (234)
T PF05450_consen 1 PIILVVARMDSFSFF-----------HDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSS 69 (234)
T ss_pred CEEEEEecccchhcc-----------cCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchH
Confidence 679999999988531 1333343333 7888999999999755 2357899999999999988 6888
Q ss_pred hHHH
Q 036756 110 HMIK 113 (321)
Q Consensus 110 ~l~~ 113 (321)
.|+.
T Consensus 70 R~vy 73 (234)
T PF05450_consen 70 RFVY 73 (234)
T ss_pred HHHH
Confidence 8864
No 81
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=95.87 E-value=0.05 Score=49.87 Aligned_cols=95 Identities=17% Similarity=0.185 Sum_probs=64.3
Q ss_pred CceEEEEec-C------C-CCCEEEEEeccccCCCCCCCCCCccccCCCceecCCch-HHHHHHHHHHHHHHhcc----C
Q 036756 22 KTGIVASVG-S------G-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHD-VHTTMLLGAARLLKQRK----D 88 (321)
Q Consensus 22 ~~nvia~~~-~------~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~k-g~~aa~l~a~~~l~~~~----~ 88 (321)
-.|+.+++. | + .-|+|++.+|+||.-+-. +.--|.|.+ .|+.++|..++.+...- -
T Consensus 193 i~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsvgADSNGSGvvaLLelarlfSkly~ypsT 261 (555)
T KOG2526|consen 193 ILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSVGADSNGSGVVALLELARLFSKLYDYPST 261 (555)
T ss_pred cceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCCCCCCCCccHHHHHHHHHHHHHHhcCccc
Confidence 468888886 2 1 239999999999986421 222244554 56778888888876432 2
Q ss_pred CCCceEEEEEecCCCcc-chhhhHHHc---CCCCCcceEEEec
Q 036756 89 RLKGTVKLVFQPGEESY-GGAYHMIKE---GALEKFQGIFGLH 127 (321)
Q Consensus 89 ~~~~~i~~~~~~dEE~g-~G~~~l~~~---g~~~~~d~~i~~~ 127 (321)
..+.++.|+.+.+=-.- .|++..++- .+.+.+|++||++
T Consensus 262 rakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 262 RAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred ccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 35789999998874422 488887762 2234689999976
No 82
>PRK02256 putative aminopeptidase 1; Provisional
Probab=91.22 E-value=0.27 Score=46.66 Aligned_cols=81 Identities=12% Similarity=0.048 Sum_probs=59.7
Q ss_pred CCCccCCHHHHHHHHHHHHhhcCCcceeccC----CCcCCCcHHHHHH-HhhheEEEecccCCCCCCCCCCCCCCCcCCC
Q 036756 221 YPATVNDEEMYEHAKKVGTSLLGEANVHLLP----MAMGAEDFSFYSQ-KMAAALFMIGTRNETLKPVVRLHSPYLVIDE 295 (321)
Q Consensus 221 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~----~~~~~~D~~~~~~-~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~ 295 (321)
|.....+..+++.+++.+++. +.+.+.... ...|+||..+++. .+|++.++++. -.+|++.|.+..
T Consensus 375 y~t~~~~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~--------l~MHS~rE~~~~ 445 (462)
T PRK02256 375 YGANDANAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVAL--------LSMHSPFEIASK 445 (462)
T ss_pred ccccCCCHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhh--------hccccHHHHhhH
Confidence 333345888999999999887 776542111 2357999777773 49988765442 468999999999
Q ss_pred CcHHHHHHHHHHHHH
Q 036756 296 DVLPIGAALHAAVAI 310 (321)
Q Consensus 296 ~~l~~~~~~~~~~~~ 310 (321)
+++..+++++..++.
T Consensus 446 ~D~~~~~~ll~~f~~ 460 (462)
T PRK02256 446 ADIYETYKAYKAFLE 460 (462)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987754
No 83
>PRK02813 putative aminopeptidase 2; Provisional
Probab=86.68 E-value=1.1 Score=42.15 Aligned_cols=76 Identities=9% Similarity=-0.077 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHhhcCCcceecc--CCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHH
Q 036756 226 NDEEMYEHAKKVGTSLLGEANVHLL--PMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPI 300 (321)
Q Consensus 226 ~~~~l~~~~~~~~~~~~g~~~~~~~--~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~ 300 (321)
.+......+++.+++. +.+.+... ...++++|.+.+.. .+|++.++++. -.+|++.|.++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~--------l~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPM--------LAMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhh--------cccccHHHHccHHHHHH
Confidence 4778899999999887 77644321 22347888887654 48988765442 46899999999999999
Q ss_pred HHHHHHHHHH
Q 036756 301 GAALHAAVAI 310 (321)
Q Consensus 301 ~~~~~~~~~~ 310 (321)
+++++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999877653
No 84
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=86.14 E-value=1.5 Score=41.90 Aligned_cols=80 Identities=9% Similarity=-0.065 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHHHhhcCCcceecc--CCCcCCCcHHHHHH---HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHH
Q 036756 226 NDEEMYEHAKKVGTSLLGEANVHLL--PMAMGAEDFSFYSQ---KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPI 300 (321)
Q Consensus 226 ~~~~l~~~~~~~~~~~~g~~~~~~~--~~~~~~~D~~~~~~---~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~ 300 (321)
.|+.+.+.+++.+++. +.+.+... ...++++|.+.+.. .+|++.++++. -.+|++.|-+..+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~--------l~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQ--------LAMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhh--------cccccHHHHccHHHHHH
Confidence 4788999999999987 77644321 23455778777654 38998765442 46899999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 036756 301 GAALHAAVAISYLD 314 (321)
Q Consensus 301 ~~~~~~~~~~~~~~ 314 (321)
+++++..++..|..
T Consensus 444 ~~~l~~af~~~~~~ 457 (465)
T PTZ00371 444 LVKLIKAFFTNYSK 457 (465)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999998876654
No 85
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=77.10 E-value=30 Score=33.15 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=58.8
Q ss_pred hHHHHHHHHhCCCceecc-------CCCceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCccccCCCcee--------
Q 036756 2 GQLVRNELASLGIEYTWP-------FAKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMH-------- 65 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~-------~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~-------- 65 (321)
++++.+.+++.|++++.. .+.+.+++.=.+. ..|.++...+...=+ ...|..-+..|+-|
T Consensus 177 a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~----~~~~i~LVGKGiTFDsGG~slK 252 (468)
T cd00433 177 AEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGA----SKKPIALVGKGITFDTGGLSLK 252 (468)
T ss_pred HHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCC----CCCcEEEEcCceEecCCCcccc
Confidence 567788888889988753 2345566654443 346666555543221 11222111111111
Q ss_pred ----cCCch---HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc
Q 036756 66 ----ACGHD---VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG 106 (321)
Q Consensus 66 ----g~g~k---g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 106 (321)
-.+|| +|.|+.+++++++.+. +++-+|..+....|-.-+
T Consensus 253 p~~~M~~Mk~DM~GAAaVlga~~aia~l--~~~vnV~~i~~~~EN~is 298 (468)
T cd00433 253 PAAGMDGMKYDMGGAAAVLGAMKAIAEL--KLPVNVVGVLPLAENMIS 298 (468)
T ss_pred CccChhhccccchhHHHHHHHHHHHHHc--CCCceEEEEEEeeecCCC
Confidence 12343 8889999999999876 468888888887776443
No 86
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=72.61 E-value=46 Score=32.43 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=56.2
Q ss_pred hHHHHHHHHhCCCcee-cc-------CCCceEEEEecCC-CCCEEEEEeccccCCCCCCCCCCccccCCCcee-------
Q 036756 2 GQLVRNELASLGIEYT-WP-------FAKTGIVASVGSG-VQPWFGLRADMDALPIQEMVEWEHKSKNNGKMH------- 65 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~-~~-------~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~------- 65 (321)
++++.+.+.++|++++ .. .+.+.+++.=.+. ..|.++...+. |... ...|..-+..|+-|
T Consensus 235 Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~---g~~~-~~~~iaLVGKGITFDSGGisL 310 (569)
T PTZ00412 235 AEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYI---GNPR-SSAATALVGKGVTFDCGGLNI 310 (569)
T ss_pred HHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeC---CCCC-CCCcEEEEcCceEEcCCCCCC
Confidence 4566666777899885 32 1445566665443 34666555443 2111 12232211111111
Q ss_pred -----cCCch---HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc
Q 036756 66 -----ACGHD---VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG 106 (321)
Q Consensus 66 -----g~g~k---g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 106 (321)
-.+|| +|.|+.+++++++.+. +++-+|..+....|-.-+
T Consensus 311 KP~~~M~~MK~DMgGAAaVlga~~AiA~L--klpvnVv~iiplaENm~s 357 (569)
T PTZ00412 311 KPYGSMETMHSDMMGAATVMCTLKAIAKL--QLPVNVVAAVGLAENAIG 357 (569)
T ss_pred CCccChhhhhccchhHHHHHHHHHHHHHc--CCCeEEEEEEEhhhcCCC
Confidence 12343 7888999999999876 477888888877776443
No 87
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=72.11 E-value=16 Score=33.33 Aligned_cols=71 Identities=21% Similarity=0.180 Sum_probs=47.8
Q ss_pred ceEEEEecCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCC
Q 036756 23 TGIVASVGSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGE 102 (321)
Q Consensus 23 ~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dE 102 (321)
.|+|+.-++ .+.++++.+|.|+=..|. +|.-.++++++.++..|...+ + ...++...+|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~----------------tDN~lg~~~AV~~~~~lr~~~--~--~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGF----------------TDNILGVAQAVETAGRLRGRG--L--AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhcc----------------cchhhhHHHHHHHHHHHhhcC--c--ceeEEEEecc
Confidence 577776544 357899999999887543 233367888888888887543 2 3555555677
Q ss_pred Ccc----------chhhhHHHc
Q 036756 103 ESY----------GGAYHMIKE 114 (321)
Q Consensus 103 E~g----------~G~~~l~~~ 114 (321)
|.| -|++.++++
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred ccCCCCCcceeecccchHHHhh
Confidence 764 178888775
No 88
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=69.38 E-value=17 Score=31.24 Aligned_cols=85 Identities=16% Similarity=0.233 Sum_probs=54.9
Q ss_pred CCCEEEEEeccccCCCCCCCCCCccccCCCc-eecCCchHHHHHHHHHHHHH--HhccCCCCceEEEEEe--cCCCc---
Q 036756 33 VQPWFGLRADMDALPIQEMVEWEHKSKNNGK-MHACGHDVHTTMLLGAARLL--KQRKDRLKGTVKLVFQ--PGEES--- 104 (321)
Q Consensus 33 ~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~-~~g~g~kg~~aa~l~a~~~l--~~~~~~~~~~i~~~~~--~dEE~--- 104 (321)
..|++.+.|-+=.+-... .+ ..-+|.||.++++..|++.+ ++.++.|+++|.+.-- |+--+
T Consensus 30 ~aptlGIiGRLGgigARP-----------~~iGlVSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH 98 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARP-----------ERIGLVSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPH 98 (276)
T ss_pred CCCeeEEEeecccccccc-----------cceeeeecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCC
Confidence 458999988776664311 11 12357789999888888865 5678889999988743 22222
Q ss_pred ---c-c----hhhhHHHcCCCCCcceEEEecc
Q 036756 105 ---Y-G----GAYHMIKEGALEKFQGIFGLHV 128 (321)
Q Consensus 105 ---g-~----G~~~l~~~g~~~~~d~~i~~~~ 128 (321)
. . +...+.+.......|++++.+.
T Consensus 99 ~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 99 DPVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred CCcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 1 1 4556666555455788888764
No 89
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=65.99 E-value=37 Score=32.62 Aligned_cols=104 Identities=16% Similarity=0.062 Sum_probs=61.8
Q ss_pred hHHHHHHHHhCCCceeccC-------CCceEEEEecCC-CCCEEEEEeccccCCCCCC-----CCCCccc----cCC-Cc
Q 036756 2 GQLVRNELASLGIEYTWPF-------AKTGIVASVGSG-VQPWFGLRADMDALPIQEM-----VEWEHKS----KNN-GK 63 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~~-------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~-----~~~pf~~----~~~-G~ 63 (321)
++++.++|...|+.++... +-..+.+.-.+. ..|.++...|..+=|.... ....|.+ ++. +.
T Consensus 212 ae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~~i~lvGKGvtfDsGGl~iK~~~~ 291 (513)
T KOG2597|consen 212 AEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADKTILLVGKGVTFDSGGLSIKPKTG 291 (513)
T ss_pred HHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcceEEEEecceEEecCccccccCCC
Confidence 5788999999998765321 223344443333 3577888888776553211 1122311 111 11
Q ss_pred eec-CCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccch
Q 036756 64 MHA-CGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGG 107 (321)
Q Consensus 64 ~~g-~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G 107 (321)
+.+ ++..++.|+++++++++.+.+ ++-++.+++---|-.-+|
T Consensus 292 M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~sg 334 (513)
T KOG2597|consen 292 MDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMPSG 334 (513)
T ss_pred hhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCCCc
Confidence 222 444578899999999988764 557888888877775544
No 90
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=64.15 E-value=73 Score=30.69 Aligned_cols=100 Identities=13% Similarity=0.033 Sum_probs=57.5
Q ss_pred hHHHHHHHHhCCCceecc-------CCCceEEEEecCC-CCCEEEEEecccc----CCCCCCCCCCccc----cCCCcee
Q 036756 2 GQLVRNELASLGIEYTWP-------FAKTGIVASVGSG-VQPWFGLRADMDA----LPIQEMVEWEHKS----KNNGKMH 65 (321)
Q Consensus 2 a~~l~~~L~~~G~~~~~~-------~~~~nvia~~~~~-~~~~i~l~~H~Dt----Vp~~~~~~~pf~~----~~~G~~~ 65 (321)
++++.+.++++|++++.. .+.+.+++.=.+. ..|.++...+.-. +-+| ....|.+ .+.+- +
T Consensus 194 a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~i~LVG--KGITFDsGG~slKp~~-~ 270 (483)
T PRK00913 194 AERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKPIALVG--KGLTFDSGGISLKPAA-G 270 (483)
T ss_pred HHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCeEEEEc--CceEecCCCccCCCCc-C
Confidence 466777788889988752 2445566654443 3466665544311 1111 1122311 11110 1
Q ss_pred cCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc
Q 036756 66 ACGH---DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG 106 (321)
Q Consensus 66 g~g~---kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 106 (321)
--+| .+|.|+.+++++++.+. +++-+|+.+....|-.-+
T Consensus 271 M~~MK~DM~GAAaVlga~~aia~l--kl~vnV~~v~~l~ENm~~ 312 (483)
T PRK00913 271 MDEMKYDMGGAAAVLGTMRALAEL--KLPVNVVGVVAACENMPS 312 (483)
T ss_pred hhhcccccHhHHHHHHHHHHHHHc--CCCceEEEEEEeeccCCC
Confidence 1234 38889999999999876 467889988888877543
No 91
>PRK02256 putative aminopeptidase 1; Provisional
Probab=54.07 E-value=25 Score=33.59 Aligned_cols=40 Identities=20% Similarity=0.060 Sum_probs=28.7
Q ss_pred CceecC--CchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 036756 62 GKMHAC--GHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY 105 (321)
Q Consensus 62 G~~~g~--g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g 105 (321)
..+.+. |...++.+++.+++.+. .++..++++++..||+|
T Consensus 252 efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVG 293 (462)
T PRK02256 252 SLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIG 293 (462)
T ss_pred ceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccC
Confidence 344443 34477888888776543 35678999999999988
No 92
>PRK05015 aminopeptidase B; Provisional
Probab=49.67 E-value=2e+02 Score=27.16 Aligned_cols=34 Identities=26% Similarity=0.211 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc
Q 036756 71 VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG 106 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 106 (321)
+|.|+.+++++++.+. .++.+|..++...|-.-+
T Consensus 216 gGAAaV~ga~~~a~~~--~l~~nV~~il~~aENmis 249 (424)
T PRK05015 216 GGAATVTGALALAITR--GLNKRVKLFLCCAENLIS 249 (424)
T ss_pred hHHHHHHHHHHHHHhc--CCCceEEEEEEecccCCC
Confidence 7778888888877765 578899999988887543
No 93
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=40.95 E-value=20 Score=32.28 Aligned_cols=34 Identities=24% Similarity=0.215 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY 105 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g 105 (321)
+++.|+.+++++++.+. +++-+|+.+....|-.-
T Consensus 109 M~GAAaV~ga~~aia~l--k~~vnV~~~l~~~EN~i 142 (311)
T PF00883_consen 109 MGGAAAVLGAMRAIAKL--KLPVNVVAVLPLAENMI 142 (311)
T ss_dssp GHHHHHHHHHHHHHHHC--T-SSEEEEEEEEEEE--
T ss_pred cchHHHHHHHHHHHHHc--CCCceEEEEEEcccccC
Confidence 48889999999999876 46688888887776543
No 94
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=39.33 E-value=1.2e+02 Score=29.33 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=49.2
Q ss_pred CceEEEEecCC--CC-CEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHHHHHHhccCCCCceEEEEE
Q 036756 22 KTGIVASVGSG--VQ-PWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVF 98 (321)
Q Consensus 22 ~~nvia~~~~~--~~-~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~ 98 (321)
+.|++|.+... ++ ..+++..-++..- +. -..++++.+|+.++++++.. -+..+|+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~----~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GE----YNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------cc----cchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 46999998543 23 6688775544321 10 11478889999999998764 5789999999
Q ss_pred ecCCCccchhhhHHHc
Q 036756 99 QPGEESYGGAYHMIKE 114 (321)
Q Consensus 99 ~~dEE~g~G~~~l~~~ 114 (321)
+.+|. .|.++.+++
T Consensus 64 ~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEA 77 (504)
T ss_pred cCCcc--hHHHHHHHH
Confidence 87654 467777764
No 95
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=39.07 E-value=1.2e+02 Score=28.16 Aligned_cols=63 Identities=17% Similarity=0.104 Sum_probs=37.9
Q ss_pred cCCCCCEEEEEeccccCCCCCCCCCCccccCCCceecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccchhh
Q 036756 30 GSGVQPWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHDVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGGAY 109 (321)
Q Consensus 30 ~~~~~~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~ 109 (321)
+|.+...|+|.+|+..=-. +.+.=+|++.++..++.|++.+ ...+.+|+|.|+ .-|+-
T Consensus 125 pG~s~~EillsthiCHPsm-----------------ANdnLSG~~v~~~La~~L~~~~--~rytYRflf~Pe---TIGsI 182 (386)
T PF09940_consen 125 PGESDEEILLSTHICHPSM-----------------ANDNLSGPAVLTFLAKWLKQLP--NRYTYRFLFVPE---TIGSI 182 (386)
T ss_dssp --SSS-EEEEEEE----S------------------TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-T---THHHH
T ss_pred cCCCCCeEEEEEeccCccc-----------------ccccccHHHHHHHHHHHHhcCC--cCceEEEEEccc---cHHHH
Confidence 5555689999999876431 1122378888888899998754 348999999996 33666
Q ss_pred hHHHc
Q 036756 110 HMIKE 114 (321)
Q Consensus 110 ~l~~~ 114 (321)
..+.+
T Consensus 183 ~yLsk 187 (386)
T PF09940_consen 183 TYLSK 187 (386)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 96
>PRK02813 putative aminopeptidase 2; Provisional
Probab=34.14 E-value=57 Score=30.92 Aligned_cols=36 Identities=22% Similarity=-0.054 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-c---hhhh
Q 036756 70 DVHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESY-G---GAYH 110 (321)
Q Consensus 70 kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~---G~~~ 110 (321)
..++.+++.|++.++. +..++++++..||+| . ||..
T Consensus 236 r~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 236 LSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred HHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCc
Confidence 3667777777655431 678999999999988 3 6663
No 97
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=33.28 E-value=3.6e+02 Score=26.06 Aligned_cols=34 Identities=26% Similarity=0.195 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc
Q 036756 71 VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYG 106 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~ 106 (321)
+|.|+.++++.++.+. +++-+|..+.-.-|-.-+
T Consensus 278 gGAAaV~g~~~a~a~l--~l~vnv~~vl~~~ENm~~ 311 (485)
T COG0260 278 GGAAAVLGAMRALAEL--KLPVNVVGVLPAVENMPS 311 (485)
T ss_pred chHHHHHHHHHHHHHc--CCCceEEEEEeeeccCCC
Confidence 7889999999999876 477888888877776443
No 98
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=29.42 E-value=1.4e+02 Score=28.72 Aligned_cols=45 Identities=9% Similarity=-0.048 Sum_probs=25.9
Q ss_pred CceecC--CchHHHHHHHHHHHHHHhccCCCCceEEEE-EecCCCccc
Q 036756 62 GKMHAC--GHDVHTTMLLGAARLLKQRKDRLKGTVKLV-FQPGEESYG 106 (321)
Q Consensus 62 G~~~g~--g~kg~~aa~l~a~~~l~~~~~~~~~~i~~~-~~~dEE~g~ 106 (321)
..+.+. |...++.++|.|++.+.......+..+.++ ++..||+|+
T Consensus 243 e~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs 290 (465)
T PTZ00371 243 EFISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS 290 (465)
T ss_pred CeEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC
Confidence 344443 344777788888776542100223445555 499999983
No 99
>COG5482 Uncharacterized conserved protein [Function unknown]
Probab=24.51 E-value=1.3e+02 Score=24.65 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=27.7
Q ss_pred HHHHHHhCCCceeccCCCceEEEEecCCCCCEEEEEeccc
Q 036756 5 VRNELASLGIEYTWPFAKTGIVASVGSGVQPWFGLRADMD 44 (321)
Q Consensus 5 l~~~L~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~D 44 (321)
++++|++.|+-+.-..+...++|.-++ .|+|++.+++-
T Consensus 10 vk~Fle~~gyvVkgEv~gCD~val~~d--~p~vvvicELK 47 (229)
T COG5482 10 VKGFLEKAGYVVKGEVGGCDLVALSDD--DPPVVVICELK 47 (229)
T ss_pred HHHHhhcCCeEEecccCCceEEEEcCC--CCCEEEEEEec
Confidence 788999999988654556788887543 36777776654
No 100
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=22.55 E-value=6.9e+02 Score=24.73 Aligned_cols=90 Identities=12% Similarity=0.147 Sum_probs=56.1
Q ss_pred HHHHHHHHhCCCceeccC---------CCceEEEEecCC--CC-CEEEEEeccccCCCCCCCCCCccccCCCceecCCch
Q 036756 3 QLVRNELASLGIEYTWPF---------AKTGIVASVGSG--VQ-PWFGLRADMDALPIQEMVEWEHKSKNNGKMHACGHD 70 (321)
Q Consensus 3 ~~l~~~L~~~G~~~~~~~---------~~~nvia~~~~~--~~-~~i~l~~H~DtVp~~~~~~~pf~~~~~G~~~g~g~k 70 (321)
.+....+++.|.++.... .+.||++.+... ++ ..++| +||.+.. . +. ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl-----~vP~~~~--------~-----~~-~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVL-----VVPYGRS--------S-----GS-NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEE-----EEecccC--------C-----Cc-ch
Confidence 356778888898865321 247999998653 22 56766 4563211 1 11 24
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccchhhhHHHc
Q 036756 71 VHTTMLLGAARLLKQRKDRLKGTVKLVFQPGEESYGGAYHMIKE 114 (321)
Q Consensus 71 g~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~G~~~l~~~ 114 (321)
++++.+++.++.++.. .-+..+|+++|+-++= -|.++.+++
T Consensus 153 ~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRW-VYWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred hHHHHHHHHHHHhcCC-eeecccEEEEEeCCcc--ccHHHHHHH
Confidence 6777777777777754 3578999999997733 255555553
No 101
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=21.56 E-value=1.7e+02 Score=27.56 Aligned_cols=77 Identities=13% Similarity=-0.004 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHhhcCCccee---ccCCCcCCCcHHHHHH--HhhheEEEecccCCCCCCCCCCCCCCCcCCCCcHHH
Q 036756 226 NDEEMYEHAKKVGTSLLGEANVH---LLPMAMGAEDFSFYSQ--KMAAALFMIGTRNETLKPVVRLHSPYLVIDEDVLPI 300 (321)
Q Consensus 226 ~~~~l~~~~~~~~~~~~g~~~~~---~~~~~~~~~D~~~~~~--~~p~~~~~~G~~~~~~g~~~~~H~~~E~v~~~~l~~ 300 (321)
.|.+.+..+++.+++. |.+-+. ....-.|++=...++. .++++-+ |+.- -.+|++.|-....++..
T Consensus 354 td~~~~a~~~~l~~~~-~Vp~Q~f~~~~d~~~Gstigpi~aa~tGi~tIDi--G~~~------LsMHS~rE~~g~~D~~~ 424 (437)
T COG1362 354 TDSEGIALLRKLAQKA-GVPWQVFVLRNDVPCGSTIGPILAARTGIRTIDI--GPAL------LSMHSIRELSGSADLYE 424 (437)
T ss_pred cCchHHHHHHHHHHHc-CCceEEEEecccCCCCcccchhHHhhcCCceeec--chhh------hhhccHHHHcchhHHHH
Confidence 3778888999999887 765332 1112244555555544 3888865 5432 46899999999999999
Q ss_pred HHHHHHHHHHH
Q 036756 301 GAALHAAVAIS 311 (321)
Q Consensus 301 ~~~~~~~~~~~ 311 (321)
..+.|..+..+
T Consensus 425 ~~~~~~aFf~~ 435 (437)
T COG1362 425 AYKALSAFFEN 435 (437)
T ss_pred HHHHHHHHHhc
Confidence 99999887653
Done!