Query 036759
Match_columns 176
No_of_seqs 142 out of 1782
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 05:14:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036759.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036759hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.7E-31 8.1E-36 198.9 17.0 165 2-167 24-191 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-27 2.3E-32 183.6 17.0 163 2-165 32-195 (517)
3 PLN00110 flavonoid 3',5'-hydro 100.0 3.5E-27 7.5E-32 180.2 16.7 164 1-164 28-192 (504)
4 PLN03234 cytochrome P450 83B1; 100.0 9.6E-27 2.1E-31 177.8 16.8 166 1-166 25-192 (499)
5 PTZ00404 cytochrome P450; Prov 100.0 2.6E-27 5.6E-32 180.3 13.4 162 2-166 27-189 (482)
6 PLN02971 tryptophan N-hydroxyl 99.9 1.5E-26 3.3E-31 178.1 16.4 164 2-165 55-222 (543)
7 PLN03112 cytochrome P450 famil 99.9 1.6E-26 3.5E-31 177.1 16.2 164 2-165 30-194 (514)
8 PLN02966 cytochrome P450 83A1 99.9 1.7E-26 3.8E-31 176.4 16.3 164 2-166 27-193 (502)
9 PLN02655 ent-kaurene oxidase 99.9 2.6E-26 5.7E-31 174.0 16.9 161 6-166 1-165 (466)
10 PLN02394 trans-cinnamate 4-mon 99.9 6E-26 1.3E-30 173.6 17.1 166 1-166 27-195 (503)
11 PLN02183 ferulate 5-hydroxylas 99.9 3.3E-26 7.1E-31 175.4 15.5 163 1-166 33-196 (516)
12 PLN00168 Cytochrome P450; Prov 99.9 6.8E-26 1.5E-30 173.8 16.6 163 2-166 33-201 (519)
13 PLN02290 cytokinin trans-hydro 99.9 5.4E-26 1.2E-30 174.3 13.6 161 3-166 41-222 (516)
14 PLN03018 homomethionine N-hydr 99.9 2.8E-24 6E-29 165.0 16.6 162 3-165 39-205 (534)
15 PLN02500 cytochrome P450 90B1 99.9 6.2E-25 1.3E-29 167.5 11.0 157 2-166 36-199 (490)
16 PF00067 p450: Cytochrome P450 99.9 2.6E-25 5.6E-30 167.4 8.1 157 6-165 1-163 (463)
17 PLN02196 abscisic acid 8'-hydr 99.9 1.6E-24 3.5E-29 164.2 11.5 155 2-165 33-189 (463)
18 PLN03141 3-epi-6-deoxocathaste 99.9 3.2E-24 7E-29 162.1 12.2 157 1-165 4-167 (452)
19 PLN02774 brassinosteroid-6-oxi 99.9 6E-24 1.3E-28 161.1 10.2 156 2-165 29-186 (463)
20 PLN02302 ent-kaurenoic acid ox 99.9 7.2E-23 1.6E-27 156.3 13.8 155 2-165 40-203 (490)
21 PLN02648 allene oxide synthase 99.9 1.7E-23 3.8E-28 158.3 8.5 160 2-166 15-194 (480)
22 KOG0158 Cytochrome P450 CYP3/C 99.9 1.7E-22 3.7E-27 151.2 12.7 161 3-166 30-195 (499)
23 PLN02936 epsilon-ring hydroxyl 99.9 3.1E-22 6.8E-27 152.6 14.4 156 7-166 15-177 (489)
24 PLN03195 fatty acid omega-hydr 99.9 3.1E-22 6.8E-27 153.6 14.1 159 3-166 29-193 (516)
25 PLN02169 fatty acid (omega-1)- 99.9 3.1E-22 6.6E-27 152.9 13.3 160 3-166 30-198 (500)
26 PLN02738 carotene beta-ring hy 99.9 4.3E-22 9.4E-27 155.1 13.9 148 15-166 142-291 (633)
27 KOG0157 Cytochrome P450 CYP4/C 99.9 7E-22 1.5E-26 150.6 13.3 154 3-161 34-192 (497)
28 PLN02987 Cytochrome P450, fami 99.9 9.1E-22 2E-26 149.3 11.1 154 2-165 28-188 (472)
29 KOG0159 Cytochrome P450 CYP11/ 99.8 1.4E-19 3.1E-24 133.9 12.8 162 2-165 48-222 (519)
30 PLN02426 cytochrome P450, fami 99.7 9.7E-16 2.1E-20 117.4 14.6 150 11-166 48-204 (502)
31 KOG0684 Cytochrome P450 [Secon 99.6 3E-14 6.5E-19 104.2 9.1 154 5-165 32-190 (486)
32 COG2124 CypX Cytochrome P450 [ 99.4 1.2E-12 2.7E-17 98.1 9.4 134 25-166 24-163 (411)
33 KOG0114 Predicted RNA-binding 68.8 24 0.00052 21.5 5.8 58 4-63 12-76 (124)
34 PF13625 Helicase_C_3: Helicas 49.4 46 0.00099 20.8 4.2 38 23-62 74-112 (129)
35 KOG0149 Predicted RNA-binding 47.6 38 0.00082 23.9 3.7 56 15-72 17-82 (247)
36 PF13893 RRM_5: RNA recognitio 47.4 39 0.00085 17.2 3.7 33 30-62 2-39 (56)
37 KOG0132 RNA polymerase II C-te 44.1 1.1E+02 0.0023 26.0 6.1 62 2-63 406-476 (894)
38 PLN03134 glycine-rich RNA-bind 44.0 86 0.0019 20.1 5.9 48 14-63 38-95 (144)
39 TIGR01661 ELAV_HUD_SF ELAV/HuD 39.0 1.1E+02 0.0024 22.6 5.5 54 14-69 273-337 (352)
40 PRK12333 nucleoside triphospha 36.3 78 0.0017 21.9 3.9 39 116-158 28-66 (204)
41 PLN03120 nucleic acid binding 36.1 1.7E+02 0.0036 21.2 6.8 57 14-72 8-71 (260)
42 PF09926 DUF2158: Uncharacteri 35.3 42 0.00091 17.6 2.0 16 37-52 4-19 (53)
43 cd08780 Death_TRADD Death Doma 34.0 1E+02 0.0022 18.2 5.1 41 93-134 13-61 (90)
44 COG5329 Phosphoinositide polyp 33.9 34 0.00074 27.5 2.1 23 26-48 296-318 (570)
45 cd08318 Death_NMPP84 Death dom 31.7 1.1E+02 0.0023 17.7 5.5 39 93-134 18-59 (86)
46 PRK02302 hypothetical protein; 30.8 1.2E+02 0.0026 17.9 3.9 30 34-63 24-54 (89)
47 PF08675 RNA_bind: RNA binding 30.8 87 0.0019 18.3 2.9 37 27-63 23-61 (87)
48 COG1707 ACT domain-containing 29.1 64 0.0014 21.5 2.4 36 23-58 154-194 (218)
49 KOG0107 Alternative splicing f 28.5 1.7E+02 0.0038 19.8 4.3 44 14-59 14-61 (195)
50 PF14840 DNA_pol3_delt_C: Proc 28.4 1.6E+02 0.0034 18.5 5.0 55 94-154 64-118 (125)
51 PRK02886 hypothetical protein; 26.7 1.4E+02 0.0031 17.5 4.0 30 34-63 22-52 (87)
52 PF00076 RRM_1: RNA recognitio 26.1 1.1E+02 0.0023 15.9 6.0 46 15-62 3-57 (70)
53 PF09804 DUF2347: Uncharacteri 25.9 28 0.0006 25.3 0.5 34 23-56 158-195 (280)
54 TIGR01659 sex-lethal sex-letha 24.6 2.8E+02 0.0062 21.0 5.5 48 14-63 197-254 (346)
55 KOG0109 RNA-binding protein LA 24.3 1.5E+02 0.0032 21.9 3.7 47 14-62 6-54 (346)
56 smart00362 RRM_2 RNA recogniti 24.0 1.2E+02 0.0025 15.5 5.6 39 25-63 12-58 (72)
57 cd01646 RT_Bac_retron_I RT_Bac 23.2 1.5E+02 0.0033 19.1 3.5 54 3-61 52-106 (158)
58 PF08780 NTase_sub_bind: Nucle 22.2 2.1E+02 0.0046 17.9 5.9 62 54-121 43-108 (124)
59 COG4471 Uncharacterized protei 21.8 1.9E+02 0.004 17.1 4.6 33 31-63 20-53 (90)
60 PF14164 YqzH: YqzH-like prote 20.9 1.6E+02 0.0036 16.1 3.8 38 118-155 25-62 (64)
61 PF14605 Nup35_RRM_2: Nup53/35 20.2 1.5E+02 0.0032 15.3 3.8 34 26-59 14-50 (53)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=3.7e-31 Score=198.92 Aligned_cols=165 Identities=41% Similarity=0.764 Sum_probs=148.4
Q ss_pred CCCCCCCCCCCceecccccCCCC-chHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCc-hhhhh
Q 036759 2 RKILPPGPKGFPIVGCLHLLGKF-PPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPP-LQATK 78 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~-~~~~~ 78 (176)
+.++||||+++|+|||++.+... ++..+.+|.++||||+++++|..++|||+|+++++ +|++++..|++|+. .....
T Consensus 24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 46899999999999999999876 99999999999999999999999999999999999 99999999999997 23445
Q ss_pred HHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhh
Q 036759 79 YISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRM 158 (176)
Q Consensus 79 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~ 158 (176)
.+..++.+++++.+|+.|+.+||++....++...++.+...-.++++++++.+.+ ...+.++|+...+..++.++|+++
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~ 182 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRM 182 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHH
Confidence 6665678999997899999999999977899999998888889999999999987 223378999999999999999999
Q ss_pred hccccCCCc
Q 036759 159 VLGKKRSDD 167 (176)
Q Consensus 159 ~fG~~~~~~ 167 (176)
+||.++++.
T Consensus 183 ~fG~rf~~~ 191 (489)
T KOG0156|consen 183 LFGRRFEEE 191 (489)
T ss_pred HhCCccccC
Confidence 999999974
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.96 E-value=1.1e-27 Score=183.62 Aligned_cols=163 Identities=33% Similarity=0.728 Sum_probs=139.8
Q ss_pred CCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHH
Q 036759 2 RKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYI 80 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~ 80 (176)
+.+.||||.++|++||++.+..+++.++.+|.++||+||++++++.++++++||++++ +|.++...|.+++.......+
T Consensus 32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~ 111 (517)
T PLN02687 32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM 111 (517)
T ss_pred CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence 3468999999999999988877799999999999999999999999999999999999 998887788887754433333
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhhc
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMVL 160 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~f 160 (176)
...+.+++++.+|+.|+++|+++++++|+.++++.+.+.+.+++.++++.|.+.. .+.++|+.+.++.+++|+++.++|
T Consensus 112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~~f 190 (517)
T PLN02687 112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRAMV 190 (517)
T ss_pred ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHh
Confidence 3333456666569999999999975789999999999999999999999997643 356799999999999999999999
Q ss_pred cccCC
Q 036759 161 GKKRS 165 (176)
Q Consensus 161 G~~~~ 165 (176)
|.++.
T Consensus 191 G~~~~ 195 (517)
T PLN02687 191 GRRVF 195 (517)
T ss_pred Ccccc
Confidence 99874
No 3
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.95 E-value=3.5e-27 Score=180.17 Aligned_cols=164 Identities=35% Similarity=0.663 Sum_probs=138.0
Q ss_pred CCCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhH
Q 036759 1 NRKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKY 79 (176)
Q Consensus 1 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~ 79 (176)
++.++||||+++|++|+++.+..+++.++.+++++||+|+++++|++++|+++||++++ ++.++...|.+++.......
T Consensus 28 ~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~ 107 (504)
T PLN00110 28 PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATH 107 (504)
T ss_pred ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhh
Confidence 35688999999999999887766789999999999999999999999999999999999 99888778888775432222
Q ss_pred HhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 80 ISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 80 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
...++.+.+++.+|+.|+++|++++.++|++.+++.+.+.+.+++..+++.+.+....|.++|+.+++..+++|+|++++
T Consensus 108 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~ 187 (504)
T PLN00110 108 LAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVI 187 (504)
T ss_pred hccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHH
Confidence 22222334455569999999999983479999999999999999999999997755466789999999999999999999
Q ss_pred ccccC
Q 036759 160 LGKKR 164 (176)
Q Consensus 160 fG~~~ 164 (176)
||.++
T Consensus 188 fg~~~ 192 (504)
T PLN00110 188 LSRRV 192 (504)
T ss_pred hCCcc
Confidence 99987
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.95 E-value=9.6e-27 Score=177.80 Aligned_cols=166 Identities=37% Similarity=0.715 Sum_probs=139.1
Q ss_pred CCCCCCCCCCCCceecccccCCC-CchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhh
Q 036759 1 NRKILPPGPKGFPIVGCLHLLGK-FPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATK 78 (176)
Q Consensus 1 ~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~ 78 (176)
++.+.||||+++|++||+..+.. +++.++.+++++||++|++++++.++++++|||+++ ++.++...|.+++......
T Consensus 25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~ 104 (499)
T PLN03234 25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ 104 (499)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence 35678999999999999988854 788999999999999999999999999999999999 9988877888877543322
Q ss_pred HHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhh
Q 036759 79 YISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRM 158 (176)
Q Consensus 79 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~ 158 (176)
.....+..+.+...++.|+.+|+.+..++|+++++..+.+.+.++++.+++.|.+..+.++++|+.+.+..+++|+++++
T Consensus 105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~ 184 (499)
T PLN03234 105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ 184 (499)
T ss_pred hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence 22222334444455899999999854389999999999999999999999999876555678999999999999999999
Q ss_pred hccccCCC
Q 036759 159 VLGKKRSD 166 (176)
Q Consensus 159 ~fG~~~~~ 166 (176)
+||.+++.
T Consensus 185 ~fG~~~~~ 192 (499)
T PLN03234 185 AFGKRYNE 192 (499)
T ss_pred HhCCcccc
Confidence 99998864
No 5
>PTZ00404 cytochrome P450; Provisional
Probab=99.95 E-value=2.6e-27 Score=180.27 Aligned_cols=162 Identities=23% Similarity=0.390 Sum_probs=138.9
Q ss_pred CCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHH
Q 036759 2 RKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYI 80 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~ 80 (176)
+++.+|||+++|++||+..+..+++..+.+++++||+||++++++.++++++||++++ ++.++...|.+++........
T Consensus 27 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~ 106 (482)
T PTZ00404 27 HKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHG 106 (482)
T ss_pred cCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeee
Confidence 4678899999999999988877899999999999999999999999999999999999 998776667666543322111
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhhc
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMVL 160 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~f 160 (176)
..+.+++..+ |+.|+++|++++ ++|++.+++.+.+.+.+.+..+++.|.+..+.++.+|+.+++.++++|++++++|
T Consensus 107 -~~~~~l~~~~-g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~f 183 (482)
T PTZ00404 107 -TFYHGIVTSS-GEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIF 183 (482)
T ss_pred -ccCCceeccC-hHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHh
Confidence 1246777765 999999999998 9999999999999999999999999987544567799999999999999999999
Q ss_pred cccCCC
Q 036759 161 GKKRSD 166 (176)
Q Consensus 161 G~~~~~ 166 (176)
|.+++.
T Consensus 184 G~~~~~ 189 (482)
T PTZ00404 184 NEDISF 189 (482)
T ss_pred cccccc
Confidence 998763
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=99.95 E-value=1.5e-26 Score=178.09 Aligned_cols=164 Identities=32% Similarity=0.504 Sum_probs=133.0
Q ss_pred CCCCCCCCCCCceecccccCCC-Cc-hHHHHHHHHhhC-CeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhh
Q 036759 2 RKILPPGPKGFPIVGCLHLLGK-FP-PRALHKLAKIYG-PIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQAT 77 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~-~~-~~~~~~~~~~yg-~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~ 77 (176)
+.++||||+++|++||++.+.. .+ +.++.+|.++|| +|+++++|+.++++++||++++ +|.+++..|.+++.....
T Consensus 55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~ 134 (543)
T PLN02971 55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ 134 (543)
T ss_pred CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence 4578999999999999987743 23 678899999999 8999999999999999999999 999988888888754333
Q ss_pred hHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhh
Q 036759 78 KYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCR 157 (176)
Q Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~ 157 (176)
..++.+..++++..+|+.|+++|++++++.+++..++.+.+.+.++++.+++.+.+....++++|+.+.+++++++++++
T Consensus 135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 214 (543)
T PLN02971 135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR 214 (543)
T ss_pred hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence 33332212345555699999999999746677777778888888899999888776544556799999999999999999
Q ss_pred hhccccCC
Q 036759 158 MVLGKKRS 165 (176)
Q Consensus 158 ~~fG~~~~ 165 (176)
++||.++.
T Consensus 215 ~~fG~~~~ 222 (543)
T PLN02971 215 LMFGTRTF 222 (543)
T ss_pred HHhCCccc
Confidence 99999873
No 7
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.95 E-value=1.6e-26 Score=177.13 Aligned_cols=164 Identities=39% Similarity=0.639 Sum_probs=135.7
Q ss_pred CCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHH
Q 036759 2 RKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYI 80 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~ 80 (176)
+.+.||||+++|++||+..+..+++.++.+++++||++|++++++.+.++++||++++ |+.++...|++++........
T Consensus 30 ~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~ 109 (514)
T PLN03112 30 SLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHL 109 (514)
T ss_pred CCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceee
Confidence 5578999999999999988877789999999999999999999989999999999999 998887788877653221111
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhhc
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMVL 160 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~f 160 (176)
..+....++..+|+.|+.+|+++.+++|+.++++.+.+.+.++++.+++.+.+....+.++|+.+.++.++++++++++|
T Consensus 110 ~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 189 (514)
T PLN03112 110 AYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLL 189 (514)
T ss_pred ccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHc
Confidence 11112333444599999999996547899999999999999999999998765443566899999999999999999999
Q ss_pred cccCC
Q 036759 161 GKKRS 165 (176)
Q Consensus 161 G~~~~ 165 (176)
|.++.
T Consensus 190 G~~~~ 194 (514)
T PLN03112 190 GKQYF 194 (514)
T ss_pred CCccc
Confidence 99874
No 8
>PLN02966 cytochrome P450 83A1
Probab=99.95 E-value=1.7e-26 Score=176.44 Aligned_cols=164 Identities=37% Similarity=0.681 Sum_probs=135.7
Q ss_pred CCCCCCCCCCCceecccccCC-CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhH
Q 036759 2 RKILPPGPKGFPIVGCLHLLG-KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKY 79 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~ 79 (176)
+.+.||||+++|++||++.+. .+++.++.+|+++||++|++++++.++++++||++++ |+.++...+.+++.......
T Consensus 27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 106 (502)
T PLN02966 27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF 106 (502)
T ss_pred CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence 457899999999999998874 4688999999999999999999999999999999999 99887777776654322222
Q ss_pred HhhcCcceEecCCChhHHHHHhh-hhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhh
Q 036759 80 ISYQQKNFAMAPYGSYWRKIRKL-CTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRM 158 (176)
Q Consensus 80 ~~~~~~~~~~~~~g~~~~~~R~~-~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~ 158 (176)
...+...+.+..+|+.|+.+|++ ++ ++|++.+++.+.+.+.+++.++++.|.+....++++|+.+++..+++|+++++
T Consensus 107 ~~~~~~~~~~~~~g~~w~~~R~~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~ 185 (502)
T PLN02966 107 ISYGRRDMALNHYTPYYREIRKMGMN-HLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ 185 (502)
T ss_pred eccCcceeeeCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence 11122234344459999999999 65 99999999999999999999999999876545668999999999999999999
Q ss_pred hccccCCC
Q 036759 159 VLGKKRSD 166 (176)
Q Consensus 159 ~fG~~~~~ 166 (176)
+||.+++.
T Consensus 186 ~fG~~~~~ 193 (502)
T PLN02966 186 AFGKKYNE 193 (502)
T ss_pred HhCCccCc
Confidence 99998864
No 9
>PLN02655 ent-kaurene oxidase
Probab=99.95 E-value=2.6e-26 Score=174.04 Aligned_cols=161 Identities=21% Similarity=0.363 Sum_probs=134.1
Q ss_pred CCCCCCCceecccccCC-CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHHhhc
Q 036759 6 PPGPKGFPIVGCLHLLG-KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYISYQ 83 (176)
Q Consensus 6 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~~~~ 83 (176)
||||+++|++||++.+. .+++..+.+|+++||+||++++++.++++|+||++++ +|.++...|.+++.......+...
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 78999999999998875 4588999999999999999999999999999999999 999888888877654443433332
Q ss_pred CcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhc--CCCcccHHHHHHHHHhhhhhhhhcc
Q 036759 84 QKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAAR--APCVVDISAKLSAVSANMTCRMVLG 161 (176)
Q Consensus 84 ~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG 161 (176)
+..++++++|+.|+.+|+.+.+++|+...++.+.+.+.+.++.+++.+.+... .++++|+.+.++.+++|+++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 33455555689999999877647788888899999999999999998876532 4567999999999999999999999
Q ss_pred ccCCC
Q 036759 162 KKRSD 166 (176)
Q Consensus 162 ~~~~~ 166 (176)
.+++.
T Consensus 161 ~~~~~ 165 (466)
T PLN02655 161 EDVES 165 (466)
T ss_pred ccccc
Confidence 98764
No 10
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.94 E-value=6e-26 Score=173.59 Aligned_cols=166 Identities=30% Similarity=0.487 Sum_probs=137.1
Q ss_pred CCCCCCCCCCCCceecccccCCCC-chHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhh
Q 036759 1 NRKILPPGPKGFPIVGCLHLLGKF-PPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATK 78 (176)
Q Consensus 1 ~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~ 78 (176)
++.+.||||+++|++|++..+..+ .+..+.+|+++||+||+++++++++++++||+.++ ++.++...+.+++....+.
T Consensus 27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~ 106 (503)
T PLN02394 27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD 106 (503)
T ss_pred CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence 456789999999999999877544 46899999999999999999989999999999999 9987777777766443444
Q ss_pred HHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhc-CCCcccHHHHHHHHHhhhhhh
Q 036759 79 YISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAAR-APCVVDISAKLSAVSANMTCR 157 (176)
Q Consensus 79 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~i~~ 157 (176)
.+...+.+.+++.+|+.|+++|+.+..++|++..++.+.+.+.++++++++.|.+..+ .+..+|+.+.++.+++|++++
T Consensus 107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~ 186 (503)
T PLN02394 107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR 186 (503)
T ss_pred HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence 4433333455555699999999998548899999999999999999999999976532 234689999999999999999
Q ss_pred hhccccCCC
Q 036759 158 MVLGKKRSD 166 (176)
Q Consensus 158 ~~fG~~~~~ 166 (176)
++||.+++.
T Consensus 187 ~~fG~~~~~ 195 (503)
T PLN02394 187 MMFDRRFES 195 (503)
T ss_pred HHhCCCccc
Confidence 999998863
No 11
>PLN02183 ferulate 5-hydroxylase
Probab=99.94 E-value=3.3e-26 Score=175.41 Aligned_cols=163 Identities=32% Similarity=0.700 Sum_probs=132.4
Q ss_pred CCCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhH
Q 036759 1 NRKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKY 79 (176)
Q Consensus 1 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~ 79 (176)
|+.+.||||+++|++|+++.+...++.++.+|+++||++|++++++.++++++||++++ ++.++...|++++.......
T Consensus 33 ~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 112 (516)
T PLN02183 33 RRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY 112 (516)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence 45678999999999999887755577889999999999999999999999999999999 99887777877765333222
Q ss_pred HhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 80 ISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 80 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
....+.+.+++.+|+.|+++|+++.+++|+...++.+.+. .+++..+++.|.+. .+.++|+.+.+..++++++++++
T Consensus 113 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~~~ 189 (516)
T PLN02183 113 LTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYRAA 189 (516)
T ss_pred cccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHhHh
Confidence 2222223445545999999999953389999999988875 56889999999653 46789999999999999999999
Q ss_pred ccccCCC
Q 036759 160 LGKKRSD 166 (176)
Q Consensus 160 fG~~~~~ 166 (176)
||.++++
T Consensus 190 fG~~~~~ 196 (516)
T PLN02183 190 FGSSSNE 196 (516)
T ss_pred hcCcccc
Confidence 9997754
No 12
>PLN00168 Cytochrome P450; Provisional
Probab=99.94 E-value=6.8e-26 Score=173.79 Aligned_cols=163 Identities=23% Similarity=0.460 Sum_probs=135.0
Q ss_pred CCCCCCCCCCCceecccccCC---CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhh
Q 036759 2 RKILPPGPKGFPIVGCLHLLG---KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQAT 77 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~ 77 (176)
+.++||||+++|++||+..+. .+++.++.+|+++||++|++++|+.++++++||++++ ++.++...|.+++.....
T Consensus 33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~ 112 (519)
T PLN00168 33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS 112 (519)
T ss_pred CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence 567899999999999987653 3577899999999999999999999999999999999 999888888887754332
Q ss_pred hHHhhcCcceEe-cCCChhHHHHHh-hhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhh
Q 036759 78 KYISYQQKNFAM-APYGSYWRKIRK-LCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMT 155 (176)
Q Consensus 78 ~~~~~~~~~~~~-~~~g~~~~~~R~-~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 155 (176)
..++.. .+++. ..+|+.|+++|| +++ ++|+.++++.+.+.+.++++.+++.|.+....+..+|+.+.+..++.+++
T Consensus 113 ~~~~~~-~~~~~~~~~G~~Wk~~Rr~~~~-~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii 190 (519)
T PLN00168 113 RLLGES-DNTITRSSYGPVWRLLRRNLVA-ETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL 190 (519)
T ss_pred hhhccC-CCceeCCCCCHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 333322 23443 345999999987 566 99999999999999999999999999876444456899999999999999
Q ss_pred hhhhccccCCC
Q 036759 156 CRMVLGKKRSD 166 (176)
Q Consensus 156 ~~~~fG~~~~~ 166 (176)
+.++||.++++
T Consensus 191 ~~~~fG~~~~~ 201 (519)
T PLN00168 191 VLMCFGERLDE 201 (519)
T ss_pred HHHHcCCCcCh
Confidence 99999998864
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=99.94 E-value=5.4e-26 Score=174.30 Aligned_cols=161 Identities=14% Similarity=0.213 Sum_probs=129.7
Q ss_pred CCCCCCCCCCceecccccCC-------------------CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHH
Q 036759 3 KILPPGPKGFPIVGCLHLLG-------------------KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLK 62 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~-------------------~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~ 62 (176)
++.||||+++|++||++.+. ......+.+|+++|||+|++++|+.++++++||++++ ++.
T Consensus 41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~ 120 (516)
T PLN02290 41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT 120 (516)
T ss_pred HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence 45799999999999987753 1233457899999999999999999999999999999 998
Q ss_pred hCCccccCCCchhhhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCC-Ccc
Q 036759 63 THDLIFASRPPLQATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAP-CVV 141 (176)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 141 (176)
++. .+..++...........+.++++++ |+.|+++|+++. ++|+..+++.+.+.+.++++.+++.|.+..+.+ .++
T Consensus 121 ~~~-~~~~r~~~~~~~~~~~~g~~l~~~~-g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v 197 (516)
T PLN02290 121 KYN-TVTGKSWLQQQGTKHFIGRGLLMAN-GADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV 197 (516)
T ss_pred cCC-CCCCCcchhhhHHHHHhcCCccccC-chHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 763 3444443211111111246777775 999999999998 999999999999999999999999998754333 479
Q ss_pred cHHHHHHHHHhhhhhhhhccccCCC
Q 036759 142 DISAKLSAVSANMTCRMVLGKKRSD 166 (176)
Q Consensus 142 d~~~~~~~~~~~~i~~~~fG~~~~~ 166 (176)
|+.++++.++++++++++||.+++.
T Consensus 198 d~~~~~~~~~~~vi~~~~fG~~~~~ 222 (516)
T PLN02290 198 EIGEYMTRLTADIISRTEFDSSYEK 222 (516)
T ss_pred EhHHHHHHHHHHHHHHHHcCCcccc
Confidence 9999999999999999999998753
No 14
>PLN03018 homomethionine N-hydroxylase
Probab=99.93 E-value=2.8e-24 Score=165.00 Aligned_cols=162 Identities=28% Similarity=0.436 Sum_probs=127.1
Q ss_pred CCCCCCCCCCceecccccCC-CCch-HHHHHHHHhh-CCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhh
Q 036759 3 KILPPGPKGFPIVGCLHLLG-KFPP-RALHKLAKIY-GPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATK 78 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~-~~~~-~~~~~~~~~y-g~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~ 78 (176)
.+.||||+++|++||++.+. ..+. .++.++.++| |+||++++|+.++|+++||++++ +|.++...|.+++......
T Consensus 39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~ 118 (534)
T PLN03018 39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME 118 (534)
T ss_pred CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence 45799999999999998864 2333 3566666666 79999999999999999999999 9998888888887654444
Q ss_pred HHhhcCcceEecCCChhHHHHHhhhhhhcC-ChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhh
Q 036759 79 YISYQQKNFAMAPYGSYWRKIRKLCTQNLL-TNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCR 157 (176)
Q Consensus 79 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f-~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~ 157 (176)
.++..+.+++++.+|+.|+.+|++++ +.| +......+.+.+.+++.++++.+.+.+..+.++|+.+.++.++++++++
T Consensus 119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 197 (534)
T PLN03018 119 TIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR 197 (534)
T ss_pred hhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence 34333345777766999999999998 765 4444445555566678999999986544456799999999999999999
Q ss_pred hhccccCC
Q 036759 158 MVLGKKRS 165 (176)
Q Consensus 158 ~~fG~~~~ 165 (176)
++||.++.
T Consensus 198 ~~fG~~~~ 205 (534)
T PLN03018 198 MLFGRRHV 205 (534)
T ss_pred HHhCCccc
Confidence 99999874
No 15
>PLN02500 cytochrome P450 90B1
Probab=99.92 E-value=6.2e-25 Score=167.52 Aligned_cols=157 Identities=18% Similarity=0.259 Sum_probs=125.2
Q ss_pred CCCCCCCCCCCceecccccCC-----CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchh
Q 036759 2 RKILPPGPKGFPIVGCLHLLG-----KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ 75 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~ 75 (176)
+.+.||||+++|++||++.+. ..++.++.+++++||++|++++++.++|+++||++++ +|.+++..|.++....
T Consensus 36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~ 115 (490)
T PLN02500 36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS 115 (490)
T ss_pred CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH
Confidence 467899999999999975431 3466788999999999999999999999999999999 9988776665443222
Q ss_pred hhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhh-hhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhh
Q 036759 76 ATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINY-FQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANM 154 (176)
Q Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 154 (176)
....++ +.++++.+ |+.|+.+|++++ ++|+..+++. +.+.+.+.+..+++.|.+ +..+|+.+.+..+++++
T Consensus 116 ~~~~~g--~~~~~~~~-g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~~~~v 187 (490)
T PLN02500 116 IGGILG--KWSMLVLV-GDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKKFTFNL 187 (490)
T ss_pred HHHHhC--cccccccC-CHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHHHHHHH
Confidence 222222 23566665 999999999998 9999998886 567777777777777643 35789999999999999
Q ss_pred hhhhhccccCCC
Q 036759 155 TCRMVLGKKRSD 166 (176)
Q Consensus 155 i~~~~fG~~~~~ 166 (176)
+++++||.+.++
T Consensus 188 i~~~~fg~~~~~ 199 (490)
T PLN02500 188 MAKHIMSMDPGE 199 (490)
T ss_pred HHHHHhCCCCCc
Confidence 999999998654
No 16
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.92 E-value=2.6e-25 Score=167.42 Aligned_cols=157 Identities=27% Similarity=0.470 Sum_probs=134.1
Q ss_pred CCCCCCCceecccccCC--CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhH--H
Q 036759 6 PPGPKGFPIVGCLHLLG--KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKY--I 80 (176)
Q Consensus 6 ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~--~ 80 (176)
||||+++|++||+..+. ++++.++.+++++|||||++++++.++++|+||++++ |+.++...+..++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 89999999999998875 5788999999999999999999999999999999999 99887666665533323322 1
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChH-HHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNA-KINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~-~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
...+.++++.+ ++.|+.+|++++ +.|+.. .+ .+.+.+.+.++.+++.|.+....++.+|+.++++.++++++++++
T Consensus 81 ~~~~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFGGKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHTTTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-cccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 23456777776 899999999999 999888 66 999999999999999999976555579999999999999999999
Q ss_pred ccccCC
Q 036759 160 LGKKRS 165 (176)
Q Consensus 160 fG~~~~ 165 (176)
||.+++
T Consensus 158 fG~~~~ 163 (463)
T PF00067_consen 158 FGKDFG 163 (463)
T ss_dssp HSSHHH
T ss_pred ccceee
Confidence 999865
No 17
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.92 E-value=1.6e-24 Score=164.18 Aligned_cols=155 Identities=23% Similarity=0.350 Sum_probs=127.6
Q ss_pred CCCCCCCCCCCceecccccC-CCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhH
Q 036759 2 RKILPPGPKGFPIVGCLHLL-GKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKY 79 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~ 79 (176)
..+.||||+++|++||+..+ .++++.++.+++++||++++++++++++++++||++++ ++.++...+. +.......
T Consensus 33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~~ 110 (463)
T PLN02196 33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASKE 110 (463)
T ss_pred CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHHH
Confidence 34678899899999998764 57899999999999999999999999999999999999 9987766552 22221111
Q ss_pred HhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 80 ISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 80 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
...+..+++..+ |+.|+++|++++ +.|++++++.+.+.+.+.+.++++.|.. .++|+.++++.+++++++.++
T Consensus 111 ~~~g~~~l~~~~-g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~v~~~~~ 183 (463)
T PLN02196 111 RMLGKQAIFFHQ-GDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWEG-----TQINTYQEMKTYTFNVALLSI 183 (463)
T ss_pred HHcCcccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCCC-----CeEEeHHHHHHHHHHHHHHHH
Confidence 112223666665 999999999999 9999999999999999999999988742 478999999999999999999
Q ss_pred ccccCC
Q 036759 160 LGKKRS 165 (176)
Q Consensus 160 fG~~~~ 165 (176)
||.+..
T Consensus 184 fG~~~~ 189 (463)
T PLN02196 184 FGKDEV 189 (463)
T ss_pred cCCCCc
Confidence 998753
No 18
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.92 E-value=3.2e-24 Score=162.14 Aligned_cols=157 Identities=14% Similarity=0.254 Sum_probs=124.0
Q ss_pred CCCCCCCCCCCCceecccccC-----CCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCch
Q 036759 1 NRKILPPGPKGFPIVGCLHLL-----GKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPL 74 (176)
Q Consensus 1 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~ 74 (176)
|++++||||.++|++||++.+ ..+++.++.++.++||+||++++++.++++++||++++ +|.++...+..+...
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 567889999999999998776 24688999999999999999999999999999999999 998877777654321
Q ss_pred hhhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhh-hhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhh
Q 036759 75 QATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINY-FQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSAN 153 (176)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 153 (176)
....+. +..+++..+ |+.|+++|++++ ++|+...+.. +.+.+.+.+.++++.|. .+..+|+.+.+..++++
T Consensus 84 -~~~~l~-g~~~~~~~~-g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 155 (452)
T PLN03141 84 -SLTELM-GKSSILLIN-GSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAFE 155 (452)
T ss_pred -hHHHHh-CcccccccC-cHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHHH
Confidence 222222 123566665 999999999998 8898777765 35566666666665553 34678999999999999
Q ss_pred hhhhhhccccCC
Q 036759 154 MTCRMVLGKKRS 165 (176)
Q Consensus 154 ~i~~~~fG~~~~ 165 (176)
++++++||.+..
T Consensus 156 vi~~~~~G~~~~ 167 (452)
T PLN03141 156 VLVKALISLEPG 167 (452)
T ss_pred HHHHHHcCCCch
Confidence 999999998764
No 19
>PLN02774 brassinosteroid-6-oxidase
Probab=99.91 E-value=6e-24 Score=161.09 Aligned_cols=156 Identities=21% Similarity=0.245 Sum_probs=127.6
Q ss_pred CCCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHH
Q 036759 2 RKILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYI 80 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~ 80 (176)
+++.||||+++|++||+..+.+++..++.+++++||++|+++++++++++++||++++ ++.++...+..+........+
T Consensus 29 r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l 108 (463)
T PLN02774 29 KKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL 108 (463)
T ss_pred CCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh
Confidence 5678999999999999888766788899999999999999999999999999999999 998776665433222222222
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChHHHhh-hhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINY-FQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
+ +.+++..+ |+.|+.+|++++ ++|++..++. +.+.+.+.++++++.|.. ++++|+.+.+..++++++++++
T Consensus 109 g--~~~~~~~~-g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~ 180 (463)
T PLN02774 109 G--TCNIAAVH-GSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSALKQI 180 (463)
T ss_pred C--ccchhhcC-CHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHHHHHH
Confidence 2 23566554 999999999998 9999999886 789999888888887753 3579999999999999999999
Q ss_pred ccccCC
Q 036759 160 LGKKRS 165 (176)
Q Consensus 160 fG~~~~ 165 (176)
||.+.+
T Consensus 181 ~g~~~~ 186 (463)
T PLN02774 181 AGTLSK 186 (463)
T ss_pred cCCCCh
Confidence 998654
No 20
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.90 E-value=7.2e-23 Score=156.27 Aligned_cols=155 Identities=17% Similarity=0.325 Sum_probs=124.8
Q ss_pred CCCCCCCCCCCceecccccC-----CCCchHHHHHHHHhhCC--eEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCc
Q 036759 2 RKILPPGPKGFPIVGCLHLL-----GKFPPRALHKLAKIYGP--IMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPP 73 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~--i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~ 73 (176)
+.++||||+++|++|+++.+ ..+++.++.+++++||+ ++++++++.+.++++||++++ ++.++ +.|.++..
T Consensus 40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~ 118 (490)
T PLN02302 40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP 118 (490)
T ss_pred CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence 45789999999999998765 24788999999999997 789999999999999999999 99765 44554432
Q ss_pred hhhhhHHhhcCcceEecCCChhHHHHHhhhhhhcC-ChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHh
Q 036759 74 LQATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLL-TNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSA 152 (176)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f-~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 152 (176)
......+ +.+.+...+|+.|+.+|+.++ +.| ++++++.+.+.+.+.++++++.|.. ++.+|+.+.++.+++
T Consensus 119 ~~~~~~~---g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~~~ 190 (490)
T PLN02302 119 ESTVELI---GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKLTF 190 (490)
T ss_pred hhHHHHh---ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHHHH
Confidence 2222211 223333334999999999998 888 5788999999999999999998854 246999999999999
Q ss_pred hhhhhhhccccCC
Q 036759 153 NMTCRMVLGKKRS 165 (176)
Q Consensus 153 ~~i~~~~fG~~~~ 165 (176)
+++++++||.++.
T Consensus 191 ~vi~~~~~G~~~~ 203 (490)
T PLN02302 191 KIIMYIFLSSESE 203 (490)
T ss_pred HHHHHHHcCCCCh
Confidence 9999999998765
No 21
>PLN02648 allene oxide synthase
Probab=99.89 E-value=1.7e-23 Score=158.29 Aligned_cols=160 Identities=14% Similarity=0.213 Sum_probs=125.0
Q ss_pred CCCCCCCCCCCceecccccC-----CCCchHHHHHHHHhhCC-eEEEecCCeeE-------EEeccHHHHH-HHHh----
Q 036759 2 RKILPPGPKGFPIVGCLHLL-----GKFPPRALHKLAKIYGP-IMHLRLGLMTT-------IVVSSPQAAE-FLKT---- 63 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~-i~~~~~~~~~~-------v~i~~~~~i~-vl~~---- 63 (176)
+.+.|||+.++|++|++..+ ..++..++.+.+++||+ ||+++++|.+. +++++|++++ +|.+
T Consensus 15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~ 94 (480)
T PLN02648 15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD 94 (480)
T ss_pred CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence 35679999999999998753 35678999999999999 99999988555 9999999999 9964
Q ss_pred CCccccCCCchhhhhHHhhcCc--ceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcc
Q 036759 64 HDLIFASRPPLQATKYISYQQK--NFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVV 141 (176)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 141 (176)
+...+..... .....++ +. ..+...+|+.|+++|+++. ++|+ ..++.+.+.|.+.++++++.|......+.++
T Consensus 95 ~~~~~~~~~~-~~~~l~G--~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v 169 (480)
T PLN02648 95 KRDVFTGTYM-PSTAFTG--GYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA 169 (480)
T ss_pred ccccceeeec-cCccccC--CceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence 3333333211 1222221 22 1333345999999999998 9999 4778999999999999999996543345579
Q ss_pred cHHHHHHHHHhhhhhhhhccccCCC
Q 036759 142 DISAKLSAVSANMTCRMVLGKKRSD 166 (176)
Q Consensus 142 d~~~~~~~~~~~~i~~~~fG~~~~~ 166 (176)
|+.+.+..++++++++++||.+.++
T Consensus 170 dv~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 170 EFNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred cccchHHHHHHHHHHHHHcCCCcch
Confidence 9999999999999999999997765
No 22
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=1.7e-22 Score=151.23 Aligned_cols=161 Identities=19% Similarity=0.287 Sum_probs=129.7
Q ss_pred CCCCCCCCCCceecccccCC--CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCC--Cchhhh
Q 036759 3 KILPPGPKGFPIVGCLHLLG--KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASR--PPLQAT 77 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~--~~~~~~ 77 (176)
++..|+|+++|++||+..+. +.+.....+...++||++.+..+.++.++|+|||+|+ |+.++.++|+++ +.....
T Consensus 30 rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~ 109 (499)
T KOG0158|consen 30 RRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP 109 (499)
T ss_pred cCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence 45789999999999988763 2234444444444499999999999999999999999 999999999984 322111
Q ss_pred hHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhh
Q 036759 78 KYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCR 157 (176)
Q Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~ 157 (176)
.. .....+++.+. |+.||++|..++ |.|+...++.+.++|.+.+.++++.+.+....+..+++.+.+.++|.|||++
T Consensus 110 ~~-~l~~~~Lf~~~-g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~ 186 (499)
T KOG0158|consen 110 ED-PLSALNLFFLR-GERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS 186 (499)
T ss_pred CC-cccccCchhcc-CchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence 11 11124566666 999999999999 9999999999999999999999999998644335789999999999999999
Q ss_pred hhccccCCC
Q 036759 158 MVLGKKRSD 166 (176)
Q Consensus 158 ~~fG~~~~~ 166 (176)
++||.+.+.
T Consensus 187 ~AfG~~~~s 195 (499)
T KOG0158|consen 187 CAFGLDANS 195 (499)
T ss_pred hhcccchhh
Confidence 999998874
No 23
>PLN02936 epsilon-ring hydroxylase
Probab=99.89 E-value=3.1e-22 Score=152.63 Aligned_cols=156 Identities=21% Similarity=0.277 Sum_probs=129.1
Q ss_pred CCCCCCceecccccC-----CCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHH
Q 036759 7 PGPKGFPIVGCLHLL-----GKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYI 80 (176)
Q Consensus 7 pgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~ 80 (176)
-|-.+||++|+.+.+ .+.++..+.+|+++||||+++++++.++++++||++++ |+.+....|.+++.......+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~ 94 (489)
T PLN02936 15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL 94 (489)
T ss_pred CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence 456789999986654 35678899999999999999999999999999999999 998766777765432222212
Q ss_pred hhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhH-HHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 81 SYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQP-IRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 81 ~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
.+.++++++ |+.|+.+|++++ +.|+..++..+.+ .+.++++.+++.|.+....+.++|+.++++.++++++++++
T Consensus 95 --~~~~i~~~~-g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~ 170 (489)
T PLN02936 95 --FGSGFAIAE-GELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV 170 (489)
T ss_pred --hcCccccCC-chHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence 235666665 999999999998 9999988888755 67888999999998765556789999999999999999999
Q ss_pred ccccCCC
Q 036759 160 LGKKRSD 166 (176)
Q Consensus 160 fG~~~~~ 166 (176)
||.+++.
T Consensus 171 fG~~~~~ 177 (489)
T PLN02936 171 FNYNFDS 177 (489)
T ss_pred cCCCccc
Confidence 9999874
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.89 E-value=3.1e-22 Score=153.61 Aligned_cols=159 Identities=19% Similarity=0.267 Sum_probs=123.6
Q ss_pred CCCCCCCCCCceecccccCCCCchHHHHHHHHhh---CCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchh-hh
Q 036759 3 KILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIY---GPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ-AT 77 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y---g~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~-~~ 77 (176)
++.+|||+++|++||++.+..+ +..+.+|.++| |++|++++++.+.++++||++++ |+.++...+.+...+. ..
T Consensus 29 ~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~ 107 (516)
T PLN03195 29 QRNRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM 107 (516)
T ss_pred ccccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence 3457999999999998665332 44567777777 89999999999999999999999 9977655565543221 11
Q ss_pred hHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHH-HHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhh
Q 036759 78 KYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIR-KEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTC 156 (176)
Q Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~ 156 (176)
..+ .+.+++..+ |+.|+.+|++++ ++|+..+++.+.+.+ .+.++.+++.+.+....+.++|+.++++.+++|+|+
T Consensus 108 ~~~--~g~~l~~~~-g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~ 183 (516)
T PLN03195 108 EVL--LGDGIFNVD-GELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC 183 (516)
T ss_pred HHH--hcCeeeccC-cHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence 111 245676654 999999999998 999999999999986 555667777776543356689999999999999999
Q ss_pred hhhccccCCC
Q 036759 157 RMVLGKKRSD 166 (176)
Q Consensus 157 ~~~fG~~~~~ 166 (176)
+++||.+++.
T Consensus 184 ~~~fG~~~~~ 193 (516)
T PLN03195 184 KVGFGVEIGT 193 (516)
T ss_pred HHHhCCCccc
Confidence 9999998864
No 25
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.89 E-value=3.1e-22 Score=152.94 Aligned_cols=160 Identities=13% Similarity=0.159 Sum_probs=122.2
Q ss_pred CCCCCCCCCCceecccccCCCCch---HHHHHHHHhhCCeEE---EecCCeeEEEeccHHHHH-HHHhCCccccCCCchh
Q 036759 3 KILPPGPKGFPIVGCLHLLGKFPP---RALHKLAKIYGPIMH---LRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ 75 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~~~~~---~~~~~~~~~yg~i~~---~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~ 75 (176)
++..|||+++|++||+..+..+.. .++.+...+||..++ .++++.++++++||++++ ||.++...+.+++...
T Consensus 30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~ 109 (500)
T PLN02169 30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK 109 (500)
T ss_pred cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence 446789999999999866543332 334444445786655 567888999999999999 9988777777654322
Q ss_pred hhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhh--hhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhh
Q 036759 76 ATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINY--FQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSAN 153 (176)
Q Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~--~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 153 (176)
.. ....|.|+++++ |+.|+.+|++++ ++|+...+.. +.+.+.+.++.+++.+.+....+.++|+.+.+.++++|
T Consensus 110 ~~--~~~~g~gl~~~~-g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d 185 (500)
T PLN02169 110 KI--FDVLGEGILTVD-FELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD 185 (500)
T ss_pred HH--HHhhcCcccccC-cHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence 21 122357888887 999999999998 9999887764 34667788888888887654456789999999999999
Q ss_pred hhhhhhccccCCC
Q 036759 154 MTCRMVLGKKRSD 166 (176)
Q Consensus 154 ~i~~~~fG~~~~~ 166 (176)
+|++++||.+.+.
T Consensus 186 vi~~~~fG~~~~~ 198 (500)
T PLN02169 186 TSSILMTGYDPMS 198 (500)
T ss_pred HHHhheeCCCccc
Confidence 9999999998753
No 26
>PLN02738 carotene beta-ring hydroxylase
Probab=99.89 E-value=4.3e-22 Score=155.11 Aligned_cols=148 Identities=18% Similarity=0.257 Sum_probs=122.2
Q ss_pred ecccccCC-CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHHhhcCcceEecCC
Q 036759 15 VGCLHLLG-KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYISYQQKNFAMAPY 92 (176)
Q Consensus 15 ~G~~~~~~-~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (176)
+||+..+. +..+..+.+|+++|||||++++|+.++++|+||+.++ |+.++...+.+++........ .+.+++..+
T Consensus 142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~~~d- 218 (633)
T PLN02738 142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLIPAD- 218 (633)
T ss_pred cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCceecCC-
Confidence 45555553 4567889999999999999999888899999999999 998776667665432121111 245676665
Q ss_pred ChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhhccccCCC
Q 036759 93 GSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMVLGKKRSD 166 (176)
Q Consensus 93 g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~ 166 (176)
|+.|+.+|+.++ ++|+..+++.+.+.+.+.++.+++.|.+....+.++|+...+..+++|+|++++||.+++.
T Consensus 219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~ 291 (633)
T PLN02738 219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDS 291 (633)
T ss_pred cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccc
Confidence 999999999999 9999999999999999999999999987655677899999999999999999999998863
No 27
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.88 E-value=7e-22 Score=150.58 Aligned_cols=154 Identities=29% Similarity=0.466 Sum_probs=128.7
Q ss_pred CCCCCCCCCCceecccccCCC---CchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchh-hh
Q 036759 3 KILPPGPKGFPIVGCLHLLGK---FPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ-AT 77 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~-~~ 77 (176)
...||||+++|++|++..+.. +...++.++..+||++|+.++++.+.++++||+.++ |+.++.....+.+.+. ..
T Consensus 34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~ 113 (497)
T KOG0157|consen 34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL 113 (497)
T ss_pred hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence 357899999999999888742 466788999999999999999999999999999999 9965555555554433 22
Q ss_pred hHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhh
Q 036759 78 KYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCR 157 (176)
Q Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~ 157 (176)
.. ..|.|+++++ |+.|+.+|++++ ++|+.+.++.+...+.+.+..++..+.... .+..+|+.+.+.++++|+||+
T Consensus 114 ~~--~lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~~ 188 (497)
T KOG0157|consen 114 KP--WLGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIICK 188 (497)
T ss_pred HH--HhcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHHH
Confidence 22 2356899998 999999999999 999999999999999999999888877643 233399999999999999999
Q ss_pred hhcc
Q 036759 158 MVLG 161 (176)
Q Consensus 158 ~~fG 161 (176)
++||
T Consensus 189 ~~~G 192 (497)
T KOG0157|consen 189 TAMG 192 (497)
T ss_pred HhcC
Confidence 9999
No 28
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.87 E-value=9.1e-22 Score=149.28 Aligned_cols=154 Identities=16% Similarity=0.280 Sum_probs=115.2
Q ss_pred CCCCCCCCCCCceecccccCC-----CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchh
Q 036759 2 RKILPPGPKGFPIVGCLHLLG-----KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ 75 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~ 75 (176)
+.++||||.++|++||++.+. .+++.++.++.++||+++++++++.+.++++||++++ ++.++...|.++....
T Consensus 28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~ 107 (472)
T PLN02987 28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS 107 (472)
T ss_pred CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence 456789999999999987752 4688899999999999999999999999999999999 9988877776554322
Q ss_pred hhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhH-HHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhh
Q 036759 76 ATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQP-IRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANM 154 (176)
Q Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 154 (176)
....++ +.++++++ |+.|+++|+++. +.++...++.+.. .+.+.+...++.|. +++++.+.+.++++++
T Consensus 108 ~~~~lg--~~~l~~~~-g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~t~~v 177 (472)
T PLN02987 108 ISNLLG--KHSLLLMK-GNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSWS------SRVLLMEEAKKITFEL 177 (472)
T ss_pred HHHHhC--cccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhhc------cceehHHHHHHHHHHH
Confidence 222222 35777775 999999999986 6555555544321 12333333333331 3689999999999999
Q ss_pred hhhhhccccCC
Q 036759 155 TCRMVLGKKRS 165 (176)
Q Consensus 155 i~~~~fG~~~~ 165 (176)
+++++||.+.+
T Consensus 178 i~~~~fg~~~~ 188 (472)
T PLN02987 178 TVKQLMSFDPG 188 (472)
T ss_pred HHHHHcCCCCh
Confidence 99999998764
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=1.4e-19 Score=133.95 Aligned_cols=162 Identities=22% Similarity=0.375 Sum_probs=133.1
Q ss_pred CCCCCCCCCCCceecccccCC----CCchHHHHHHHHhhCCeEEEe-cCCeeEEEeccHHHHH-HHHhCCccccCCC-ch
Q 036759 2 RKILPPGPKGFPIVGCLHLLG----KFPPRALHKLAKIYGPIMHLR-LGLMTTIVVSSPQAAE-FLKTHDLIFASRP-PL 74 (176)
Q Consensus 2 ~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~yg~i~~~~-~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~-~~ 74 (176)
+...+|||+.+|++|.+..+. .+.++....++++|||||+.. +|+...|.+.||+.++ +++..+ .+.-|+ ..
T Consensus 48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~ 126 (519)
T KOG0159|consen 48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLI 126 (519)
T ss_pred ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCccccc
Confidence 445789999999999987332 577899999999999999999 7888999999999999 997654 345554 11
Q ss_pred h---hhhHHhhcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhc---CCCcccHHHHHH
Q 036759 75 Q---ATKYISYQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAAR---APCVVDISAKLS 148 (176)
Q Consensus 75 ~---~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~---~~~~~d~~~~~~ 148 (176)
. .+........|++... |++|++.|..+++..+.+++++.|.+.+.+.+++++..++...+ ...+.|+...+.
T Consensus 127 ~~w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~ 205 (519)
T KOG0159|consen 127 EPWVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY 205 (519)
T ss_pred chhhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence 1 1222222346777776 99999999999966799999999999999999999999988765 234679999999
Q ss_pred HHHhhhhhhhhccccCC
Q 036759 149 AVSANMTCRMVLGKKRS 165 (176)
Q Consensus 149 ~~~~~~i~~~~fG~~~~ 165 (176)
+++++.||.++||.+++
T Consensus 206 ~wslEsi~~V~l~~rlG 222 (519)
T KOG0159|consen 206 RWSLESICLVLLGTRLG 222 (519)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999999998
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.69 E-value=9.7e-16 Score=117.41 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=113.0
Q ss_pred CCceecccccCCCCchHHHHHHHHhhC-CeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchh-hhhHHhhcCcce
Q 036759 11 GFPIVGCLHLLGKFPPRALHKLAKIYG-PIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQ-ATKYISYQQKNF 87 (176)
Q Consensus 11 ~~p~~G~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~-~~~~~~~~~~~~ 87 (176)
..++.|+......+....+..+.+.++ .+++++..+. ++++||++++ |+.++...|.+..... .... ..|.|+
T Consensus 48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~--~~g~gi 123 (502)
T PLN02426 48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGD--LLGRGI 123 (502)
T ss_pred CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHH--hcCCce
Confidence 355778876543456777767777776 5777776554 8999999999 9987766776654321 1111 235688
Q ss_pred EecCCChhHHHHHhhhhhhcCChHHHhhhh--HHHHHHHHHHHHHHHHHhc--CCCcccHHHHHHHHHhhhhhhhhcccc
Q 036759 88 AMAPYGSYWRKIRKLCTQNLLTNAKINYFQ--PIRKEELDLLIEYFKEAAR--APCVVDISAKLSAVSANMTCRMVLGKK 163 (176)
Q Consensus 88 ~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~--~~i~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~ 163 (176)
+.++ |+.|+.+|++++ +.|+..+++.+. +.+.+.++.+++.+.+..+ .+.++|+.++++++++|+|++++||.+
T Consensus 124 ~~~~-g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~ 201 (502)
T PLN02426 124 FNVD-GDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD 201 (502)
T ss_pred eecC-cHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence 7776 999999999998 999999998864 5667777788888876532 246799999999999999999999998
Q ss_pred CCC
Q 036759 164 RSD 166 (176)
Q Consensus 164 ~~~ 166 (176)
++.
T Consensus 202 ~~~ 204 (502)
T PLN02426 202 PGC 204 (502)
T ss_pred Ccc
Confidence 863
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=3e-14 Score=104.17 Aligned_cols=154 Identities=17% Similarity=0.141 Sum_probs=117.8
Q ss_pred CCCCCC-CCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHhCCccccCCCchhhhhHHh-
Q 036759 5 LPPGPK-GFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKTHDLIFASRPPLQATKYIS- 81 (176)
Q Consensus 5 ~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~~~~- 81 (176)
.||.-. ++|++|++..|.++|.+++.+++++||+||++.++|+.+-++.+|+... ++......++-.. .+..+.
T Consensus 32 ~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~---~~~~l~~ 108 (486)
T KOG0684|consen 32 EPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEE---AYSKLTT 108 (486)
T ss_pred CCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHH---HHHHhhh
Confidence 666644 5799999999999999999999999999999999999999999999999 9955433332211 111111
Q ss_pred -hcCcceEecCCChhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHH-HHHHhcCCCcccHHHHHHHHHhhhhhhhh
Q 036759 82 -YQQKNFAMAPYGSYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEY-FKEAARAPCVVDISAKLSAVSANMTCRMV 159 (176)
Q Consensus 82 -~~~~~~~~~~~g~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 159 (176)
..|.++....+......+.+++. .++...+++++.+.|.++..+.+.. |.+ ++....+.+.+..+.+.+.-..+
T Consensus 109 ~vFg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll 184 (486)
T KOG0684|consen 109 PVFGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLL 184 (486)
T ss_pred hhcCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhh
Confidence 12567777666888889999997 9999999999999999999999887 443 44555666777777776666666
Q ss_pred ccccCC
Q 036759 160 LGKKRS 165 (176)
Q Consensus 160 fG~~~~ 165 (176)
+|+...
T Consensus 185 ~~e~r~ 190 (486)
T KOG0684|consen 185 GGEVRD 190 (486)
T ss_pred hhhhhh
Confidence 666443
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=1.2e-12 Score=98.06 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=100.7
Q ss_pred chHHHHHHHHhhCCeEEEecCCee--EEEeccHHHHH-HHHhCCccccCCCchhhhh--HHhhcCcc-eEecCCChhHHH
Q 036759 25 PPRALHKLAKIYGPIMHLRLGLMT--TIVVSSPQAAE-FLKTHDLIFASRPPLQATK--YISYQQKN-FAMAPYGSYWRK 98 (176)
Q Consensus 25 ~~~~~~~~~~~yg~i~~~~~~~~~--~v~i~~~~~i~-vl~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~g~~~~~ 98 (176)
+......+.+.||.++++...+.. .+++++++.++ ++++.. .+++........ .....+.+ ++..+ |+.|++
T Consensus 24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~d-g~~H~r 101 (411)
T COG2124 24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLD-GPEHTR 101 (411)
T ss_pred hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecC-CHHHHH
Confidence 445556677788888877765544 89999999999 997653 122222111111 11122344 55555 999999
Q ss_pred HHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhhhccccCCC
Q 036759 99 IRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRMVLGKKRSD 166 (176)
Q Consensus 99 ~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~ 166 (176)
+|++++ ++|+++.++.+.+.|.+.+.++++.+ . .+..+++.+.+..+++++|+ .+||.+.++
T Consensus 102 ~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~ 163 (411)
T COG2124 102 LRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLED 163 (411)
T ss_pred HHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHH
Confidence 999999 99999999999999999999999999 4 23677889999999999999 999988764
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=68.84 E-value=24 Score=21.53 Aligned_cols=58 Identities=22% Similarity=0.301 Sum_probs=37.9
Q ss_pred CCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCC------eeEEEeccHHHHH-HHHh
Q 036759 4 ILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGL------MTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 4 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~------~~~v~i~~~~~i~-vl~~ 63 (176)
++||....+-++-|++. +=..+-+.+++-+||+|..+.+|. .-+||-.|-..++ ....
T Consensus 12 rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 12 RLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 34444445556666543 223456778888999998888763 4567777878787 7743
No 34
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=49.45 E-value=46 Score=20.84 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=27.7
Q ss_pred CCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HHH
Q 036759 23 KFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLK 62 (176)
Q Consensus 23 ~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~ 62 (176)
.+....+.+|.++||.+--. .+...+...|++.++ +..
T Consensus 74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~ 112 (129)
T PF13625_consen 74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLA 112 (129)
T ss_pred HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHh
Confidence 34456889999999976332 135677888999999 874
No 35
>KOG0149 consensus Predicted RNA-binding protein SEB4 (RRM superfamily) [General function prediction only]
Probab=47.56 E-value=38 Score=23.90 Aligned_cols=56 Identities=21% Similarity=0.242 Sum_probs=36.2
Q ss_pred ecccccCCCCchHHHHHHHHhhCCeEEEe-----c-C---CeeEEEeccHHHHH-HHHhCCccccCCC
Q 036759 15 VGCLHLLGKFPPRALHKLAKIYGPIMHLR-----L-G---LMTTIVVSSPQAAE-FLKTHDLIFASRP 72 (176)
Q Consensus 15 ~G~~~~~~~~~~~~~~~~~~~yg~i~~~~-----~-~---~~~~v~i~~~~~i~-vl~~~~~~~~~~~ 72 (176)
+|.|.+ ....+.+.+.+++||+|+--. - + |--+|-..|.+.+. .+.+.......|.
T Consensus 17 VggL~w--~T~~~~l~~yFeqfGeI~eavvitd~~t~rskGyGfVTf~d~~aa~rAc~dp~piIdGR~ 82 (247)
T KOG0149|consen 17 VGGLAW--ETHKETLRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFRDAEAATRACKDPNPIIDGRK 82 (247)
T ss_pred EcCccc--ccchHHHHHHHHHhCceEEEEEEeccCCccccceeeEEeecHHHHHHHhcCCCCcccccc
Confidence 455543 355678889999999864221 1 1 22577888999999 9876554444443
No 36
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=47.37 E-value=39 Score=17.20 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=22.2
Q ss_pred HHHHHhhCCeEEEecC----CeeEEEeccHHHHH-HHH
Q 036759 30 HKLAKIYGPIMHLRLG----LMTTIVVSSPQAAE-FLK 62 (176)
Q Consensus 30 ~~~~~~yg~i~~~~~~----~~~~v~i~~~~~i~-vl~ 62 (176)
.++..+||+|..+.+. +.-.|-..+.+.++ +..
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4677899998877653 33455567888888 764
No 37
>KOG0132 consensus RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains [RNA processing and modification; Transcription]
Probab=44.07 E-value=1.1e+02 Score=25.95 Aligned_cols=62 Identities=26% Similarity=0.255 Sum_probs=38.4
Q ss_pred CCCCCCCCCC-CceecccccCC---CCc-hHHHHHHHHhhCCeEEEecCCe---eEEEeccHHHHH-HHHh
Q 036759 2 RKILPPGPKG-FPIVGCLHLLG---KFP-PRALHKLAKIYGPIMHLRLGLM---TTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 2 ~~~~ppgp~~-~p~~G~~~~~~---~~~-~~~~~~~~~~yg~i~~~~~~~~---~~v~i~~~~~i~-vl~~ 63 (176)
.+.+|+.++. +.+....+++. ++. ..-+..+.++||+|-++.+-+. -++++.+.+.+. ++.+
T Consensus 406 ~kglP~I~pd~isV~SrTLwvG~i~k~v~e~dL~~~feefGeiqSi~li~~R~cAfI~M~~RqdA~kalqk 476 (894)
T KOG0132|consen 406 KKGLPTIPPDHISVCSRTLWVGGIPKNVTEQDLANLFEEFGEIQSIILIPPRGCAFIKMVRRQDAEKALQK 476 (894)
T ss_pred cccCCCCCCcceeEeeeeeeeccccchhhHHHHHHHHHhcccceeEeeccCCceeEEEEeehhHHHHHHHH
Confidence 4567777654 33333333332 233 4567889999999988876332 466667777777 8755
No 38
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=43.98 E-value=86 Score=20.15 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=32.4
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecC---------CeeEEEeccHHHHH-HHHh
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLG---------LMTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~i~~~~~i~-vl~~ 63 (176)
+++++.. .-....+.++.++||+|..+.+. +--+|-..+++.++ ++..
T Consensus 38 fVgnL~~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 38 FIGGLSW--GTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEeCCCC--CCCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3555543 23456788888999998766542 22466778899999 8854
No 39
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=38.99 E-value=1.1e+02 Score=22.62 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=34.4
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecCC---------eeEEEeccHHHHH-HHHh-CCcccc
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGL---------MTTIVVSSPQAAE-FLKT-HDLIFA 69 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~v~i~~~~~i~-vl~~-~~~~~~ 69 (176)
++|||.. .--...+.+++..||+|..+.+.. --+|...+++.+. ++.. ++..+.
T Consensus 273 fV~NL~~--~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~ 337 (352)
T TIGR01661 273 FVYNLSP--DTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLG 337 (352)
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEEC
Confidence 4667653 234567888899999998776532 1367777888777 6643 433333
No 40
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=36.28 E-value=78 Score=21.89 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhhhhh
Q 036759 116 FQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMTCRM 158 (176)
Q Consensus 116 ~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~ 158 (176)
+.+.+.+++-++++.+.. +..-++.+.+..+.+.|+.-.
T Consensus 28 L~~yllEE~yEv~dAI~~----~d~~~l~EELGDlLlqVvfha 66 (204)
T PRK12333 28 LRPYLLEEAAEAVDALSE----GDPQELAEELGDVLLQVAFHS 66 (204)
T ss_pred HHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555443 123344444444444444333
No 41
>PLN03120 nucleic acid binding protein; Provisional
Probab=36.12 E-value=1.7e+02 Score=21.21 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=37.2
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecC------CeeEEEeccHHHHH-HHHhCCccccCCC
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLG------LMTTIVVSSPQAAE-FLKTHDLIFASRP 72 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~v~i~~~~~i~-vl~~~~~~~~~~~ 72 (176)
++||+.. .--..-+.+++..||+|..+.+. +--+|...+++.++ .+.-++..+..+.
T Consensus 8 fVgNLs~--~tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~ 71 (260)
T PLN03120 8 KVSNVSL--KATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS 71 (260)
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence 3566543 23456778888999999877662 33466677899999 7755555554443
No 42
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=35.27 E-value=42 Score=17.56 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=13.3
Q ss_pred CCeEEEecCCeeEEEe
Q 036759 37 GPIMHLRLGLMTTIVV 52 (176)
Q Consensus 37 g~i~~~~~~~~~~v~i 52 (176)
|+++++.-||+.+.|.
T Consensus 4 GDvV~LKSGGp~MTV~ 19 (53)
T PF09926_consen 4 GDVVQLKSGGPRMTVT 19 (53)
T ss_pred CCEEEEccCCCCeEEE
Confidence 8899999988877765
No 43
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=33.98 E-value=1e+02 Score=18.15 Aligned_cols=41 Identities=17% Similarity=0.319 Sum_probs=28.6
Q ss_pred ChhHHHHHhhhhhh---cCChHHHhhhh----HH-HHHHHHHHHHHHHHH
Q 036759 93 GSYWRKIRKLCTQN---LLTNAKINYFQ----PI-RKEELDLLIEYFKEA 134 (176)
Q Consensus 93 g~~~~~~R~~~~~~---~f~~~~l~~~~----~~-i~~~~~~~~~~~~~~ 134 (176)
|..|+..=+.+. . +++-..+..+. .. +.+.+.+++..|...
T Consensus 13 Gr~WK~laR~Lg-~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~ 61 (90)
T cd08780 13 GKKWKPVGRSLQ-KNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQS 61 (90)
T ss_pred hHHHHHHHHHHc-ccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHh
Confidence 788888755554 2 36666666543 23 788899999999886
No 44
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=33.89 E-value=34 Score=27.52 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=18.8
Q ss_pred hHHHHHHHHhhCCeEEEecCCee
Q 036759 26 PRALHKLAKIYGPIMHLRLGLMT 48 (176)
Q Consensus 26 ~~~~~~~~~~yg~i~~~~~~~~~ 48 (176)
...|.++.++||+|+.+++.+++
T Consensus 296 ~kHF~~L~~~YG~v~vvNLl~tK 318 (570)
T COG5329 296 DKHFDKLREKYGDVYVVNLLKTK 318 (570)
T ss_pred HHHHHHHHHHcCCEEEEEcccCC
Confidence 45789999999999999876543
No 45
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=31.68 E-value=1.1e+02 Score=17.69 Aligned_cols=39 Identities=13% Similarity=0.296 Sum_probs=27.1
Q ss_pred ChhHHHHHhhhhhhcCChHHHhhhhH---HHHHHHHHHHHHHHHH
Q 036759 93 GSYWRKIRKLCTQNLLTNAKINYFQP---IRKEELDLLIEYFKEA 134 (176)
Q Consensus 93 g~~~~~~R~~~~~~~f~~~~l~~~~~---~i~~~~~~~~~~~~~~ 134 (176)
|..|+..=+.+. |+...+..+.. .+.+.+.+++..|.+.
T Consensus 18 G~~Wk~Lar~LG---ls~~dI~~i~~~~~~~~eq~~~mL~~W~~r 59 (86)
T cd08318 18 GEDWKTLAPHLE---MKDKEIRAIESDSEDIKMQAKQLLVAWQDR 59 (86)
T ss_pred hhhHHHHHHHcC---CCHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 788887655443 67666654432 2578889999999887
No 46
>PRK02302 hypothetical protein; Provisional
Probab=30.81 E-value=1.2e+02 Score=17.90 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=21.1
Q ss_pred HhhCCeEEEecCCeeEEEeccHHHHH-HHHh
Q 036759 34 KIYGPIMHLRLGLMTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 34 ~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~ 63 (176)
++||+|..+.--.+-+++-+|.+.+. +..+
T Consensus 24 rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 24 SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 68999987754334566667888888 7754
No 47
>PF08675 RNA_bind: RNA binding domain; InterPro: IPR014789 This domain corresponds to the RNA binding domain of Poly(A)-specific ribonuclease (PARN). ; GO: 0003723 RNA binding, 0004535 poly(A)-specific ribonuclease activity, 0046872 metal ion binding, 0006402 mRNA catabolic process, 0005634 nucleus, 0005737 cytoplasm; PDB: 3CTR_A 2ROK_A 3D45_B 1WHV_A.
Probab=30.80 E-value=87 Score=18.31 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=28.3
Q ss_pred HHHHHHHHhhCCeEEEecCCe-eEEEeccHHHHH-HHHh
Q 036759 27 RALHKLAKIYGPIMHLRLGLM-TTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 27 ~~~~~~~~~yg~i~~~~~~~~-~~v~i~~~~~i~-vl~~ 63 (176)
.-+.++...||.|..-|+... -+|.+.+.+.++ +...
T Consensus 23 ~DI~qlFspfG~I~VsWi~dTSAfV~l~~r~~~~~v~~~ 61 (87)
T PF08675_consen 23 SDIYQLFSPFGQIYVSWINDTSAFVALHNRDQAKVVMNT 61 (87)
T ss_dssp HHHHHHCCCCCCEEEEEECTTEEEEEECCCHHHHHHHHH
T ss_pred hhHHHHhccCCcEEEEEEcCCcEEEEeecHHHHHHHHHH
Confidence 356777888999988888665 567778888888 7743
No 48
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=29.11 E-value=64 Score=21.54 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=27.4
Q ss_pred CCchHHHHHHHHhhC-CeEEEecCCe-e---EEEeccHHHH
Q 036759 23 KFPPRALHKLAKIYG-PIMHLRLGLM-T---TIVVSSPQAA 58 (176)
Q Consensus 23 ~~~~~~~~~~~~~yg-~i~~~~~~~~-~---~v~i~~~~~i 58 (176)
+...+...++.+++| |+..++++|. + -++++||=.+
T Consensus 154 GkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqA 194 (218)
T COG1707 154 GKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQA 194 (218)
T ss_pred chHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHh
Confidence 577889999999999 8999997653 2 3577777543
No 49
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=28.49 E-value=1.7e+02 Score=19.81 Aligned_cols=44 Identities=25% Similarity=0.395 Sum_probs=26.7
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecC----CeeEEEeccHHHHH
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLG----LMTTIVVSSPQAAE 59 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~v~i~~~~~i~ 59 (176)
++|||.. .---.-++..+..||++..+|+. +--+|=.-||..+.
T Consensus 14 YVGnL~~--~a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~ 61 (195)
T KOG0107|consen 14 YVGNLGS--RATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAE 61 (195)
T ss_pred EeccCCC--CcchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHH
Confidence 4677643 22334568888999999888862 22344445555444
No 50
>PF14840 DNA_pol3_delt_C: Processivity clamp loader gamma complex DNA pol III C-term; PDB: 3GLG_F 1XXH_A 3GLF_F 1JQJ_C 3GLI_F.
Probab=28.38 E-value=1.6e+02 Score=18.50 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=31.5
Q ss_pred hhHHHHHhhhhhhcCChHHHhhhhHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhh
Q 036759 94 SYWRKIRKLCTQNLLTNAKINYFQPIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANM 154 (176)
Q Consensus 94 ~~~~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 154 (176)
..|..++.++. .+ ++.+...-.+.+-..+..++...+.....|+...+..+++..
T Consensus 64 rIW~~Rq~l~~-~A-----l~Rls~~~L~~ll~~~a~iD~~iKg~~~~~~W~~L~~L~L~l 118 (125)
T PF14840_consen 64 RIWQKRQPLYQ-QA-----LQRLSLQQLEQLLQLLAQIDRAIKGNYQGDPWDELEQLSLLL 118 (125)
T ss_dssp TT-CCHHHHHH-HH-----HHHS-HHHHHHHHHHHHHHHHHHHTSTTSTHHHHHHHHHHHT
T ss_pred CCCHhHHHHHH-HH-----HHcCCHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
Confidence 45666666665 43 344444444555555556665544455678888888877654
No 51
>PRK02886 hypothetical protein; Provisional
Probab=26.70 E-value=1.4e+02 Score=17.49 Aligned_cols=30 Identities=10% Similarity=0.254 Sum_probs=21.1
Q ss_pred HhhCCeEEEecCCeeEEEeccHHHHH-HHHh
Q 036759 34 KIYGPIMHLRLGLMTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 34 ~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~ 63 (176)
++||+|..+.--..-+++-+|.+.+. +..+
T Consensus 22 rkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 22 RKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 68999987754334566667888888 7754
No 52
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=26.11 E-value=1.1e+02 Score=15.91 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=29.5
Q ss_pred ecccccCCCCchHHHHHHHHhhCCeEEEecCC--------eeEEEeccHHHHH-HHH
Q 036759 15 VGCLHLLGKFPPRALHKLAKIYGPIMHLRLGL--------MTTIVVSSPQAAE-FLK 62 (176)
Q Consensus 15 ~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~--------~~~v~i~~~~~i~-vl~ 62 (176)
++++.. .-....+.++..+||++..+.+.. --+|...+.+.++ ++.
T Consensus 3 v~nlp~--~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~ 57 (70)
T PF00076_consen 3 VGNLPP--DVTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALE 57 (70)
T ss_dssp EESETT--TSSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EcCCCC--cCCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHH
Confidence 455543 233467788889999875554322 1355667888888 875
No 53
>PF09804 DUF2347: Uncharacterized conserved protein (DUF2347); InterPro: IPR018626 Members of this family of hypothetical proteins have no known function.
Probab=25.93 E-value=28 Score=25.33 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=26.2
Q ss_pred CCchHHHHHHHHhhCC-eEEEe---cCCeeEEEeccHH
Q 036759 23 KFPPRALHKLAKIYGP-IMHLR---LGLMTTIVVSSPQ 56 (176)
Q Consensus 23 ~~~~~~~~~~~~~yg~-i~~~~---~~~~~~v~i~~~~ 56 (176)
.+|...+..+.+.+|| ||.+| +..+++++++.+.
T Consensus 158 ~Hp~~~Lp~~l~~fGPlIF~L~K~aLLRKRILi~~~~p 195 (280)
T PF09804_consen 158 YHPAGSLPQLLDTFGPLIFPLWKAALLRKRILIFSPPP 195 (280)
T ss_pred CCHHHHHHHHHHHhCcHHHHHHHHHhhcCcEEEecCCC
Confidence 4677889999999998 55554 6778888887654
No 54
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=24.58 E-value=2.8e+02 Score=20.96 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=31.6
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecCC---------eeEEEeccHHHHH-HHHh
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGL---------MTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~v~i~~~~~i~-vl~~ 63 (176)
++++|.. .-..+.+.++..+||.|..+.+.. --+|-..+.+.++ ++..
T Consensus 197 fV~nLp~--~vtee~L~~~F~~fG~V~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 254 (346)
T TIGR01659 197 YVTNLPR--TITDDQLDTIFGKYGQIVQKNILRDKLTGTPRGVAFVRFNKREEAQEAISA 254 (346)
T ss_pred EEeCCCC--cccHHHHHHHHHhcCCEEEEEEeecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566543 223467888999999987665431 2366777888888 7754
No 55
>KOG0109 consensus RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains [RNA processing and modification; General function prediction only]
Probab=24.26 E-value=1.5e+02 Score=21.93 Aligned_cols=47 Identities=19% Similarity=0.303 Sum_probs=32.6
Q ss_pred eecccccCCCCchHHHHHHHHhhCCeEEEecC-CeeEEEeccHHHHH-HHH
Q 036759 14 IVGCLHLLGKFPPRALHKLAKIYGPIMHLRLG-LMTTIVVSSPQAAE-FLK 62 (176)
Q Consensus 14 ~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~v~i~~~~~i~-vl~ 62 (176)
+|||+.. .-...-+..++++||.|.-..+- +--+|.|-|..+.+ +..
T Consensus 6 FIGNLp~--~~~~~elr~lFe~ygkVlECDIvKNYgFVHiEdktaaedair 54 (346)
T KOG0109|consen 6 FIGNLPR--EATEQELRSLFEQYGKVLECDIVKNYGFVHIEDKTAAEDAIR 54 (346)
T ss_pred hccCCCc--ccchHHHHHHHHhhCceEeeeeecccceEEeecccccHHHHh
Confidence 4788765 44567788889999988766543 33578887766666 554
No 56
>smart00362 RRM_2 RNA recognition motif.
Probab=23.97 E-value=1.2e+02 Score=15.47 Aligned_cols=39 Identities=21% Similarity=0.347 Sum_probs=25.5
Q ss_pred chHHHHHHHHhhCCeEEEecC-------CeeEEEeccHHHHH-HHHh
Q 036759 25 PPRALHKLAKIYGPIMHLRLG-------LMTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 25 ~~~~~~~~~~~yg~i~~~~~~-------~~~~v~i~~~~~i~-vl~~ 63 (176)
....+.++.++||++..+.+. +.-.+-..+++.++ ++..
T Consensus 12 ~~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 12 TEEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred CHHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 345667777899987655432 23355667888888 7743
No 57
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=23.18 E-value=1.5e+02 Score=19.11 Aligned_cols=54 Identities=24% Similarity=0.186 Sum_probs=29.2
Q ss_pred CCCCCCCCCCceecccccCCCCchHHHHHHHHhhCCeEEEecCCeeEEEeccHHHHH-HH
Q 036759 3 KILPPGPKGFPIVGCLHLLGKFPPRALHKLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FL 61 (176)
Q Consensus 3 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl 61 (176)
..+|.|+..-|+++++.-. ..-..+.+..+.+..++....-+++..+.+.++ ++
T Consensus 52 ~GlpqG~~lS~~L~~~~l~-----~~d~~i~~~~~~~~~~RY~DD~~i~~~~~~~~~~~~ 106 (158)
T cd01646 52 NGLPIGPLTSRFLANIYLN-----DVDHELKSKLKGVDYVRYVDDIRIFADSKEEAEEIL 106 (158)
T ss_pred ceEccCcchHHHHHHHHHH-----HHHHHHHhccCCceEEEecCcEEEEcCCHHHHHHHH
Confidence 3566777667777775421 122222222455555555565566666766655 55
No 58
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=22.24 E-value=2.1e+02 Score=17.86 Aligned_cols=62 Identities=10% Similarity=0.164 Sum_probs=33.6
Q ss_pred cHHHHH-HHHhCCccccCCCchhhhhHHhhcCcceEecCCChhHHHH---HhhhhhhcCChHHHhhhhHHHH
Q 036759 54 SPQAAE-FLKTHDLIFASRPPLQATKYISYQQKNFAMAPYGSYWRKI---RKLCTQNLLTNAKINYFQPIRK 121 (176)
Q Consensus 54 ~~~~i~-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---R~~~~~~~f~~~~l~~~~~~i~ 121 (176)
...+++ .|...+..-...|. ..+.... ..|++ . +++.|-.+ |..++ +.+...........|.
T Consensus 43 aWK~lK~~L~~~G~~~~~spr-~~~r~A~--~~glI-~-d~e~Wl~m~~~RN~ts-HtYde~~a~~i~~~I~ 108 (124)
T PF08780_consen 43 AWKTLKDYLEYEGISECNSPR-DVFREAF--KAGLI-D-DGEIWLDMLEDRNLTS-HTYDEETAEEIYERIP 108 (124)
T ss_dssp HHHHHHHHHHHCTSSCCTSHH-HHHHHHH--HTTSS-S-HHHHHHHHHHHHHHGG-GTTSHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHhCCcccCCHH-HHHHHHH--HcCCC-C-CHHHHHHHHHHhcccc-CCCCHHHHHHHHHHHH
Confidence 346677 77665442112221 1222222 24665 4 48999754 67776 7787766555555555
No 59
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.84 E-value=1.9e+02 Score=17.07 Aligned_cols=33 Identities=9% Similarity=0.179 Sum_probs=23.4
Q ss_pred HHHHhhCCeEEEecCCeeEEEeccHHHHH-HHHh
Q 036759 31 KLAKIYGPIMHLRLGLMTTIVVSSPQAAE-FLKT 63 (176)
Q Consensus 31 ~~~~~yg~i~~~~~~~~~~v~i~~~~~i~-vl~~ 63 (176)
+--++||+|....--.+-++.-++-+.+. ++.+
T Consensus 20 RqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 20 RQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred HHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 33478999987754444566678889899 8855
No 60
>PF14164 YqzH: YqzH-like protein
Probab=20.89 E-value=1.6e+02 Score=16.11 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHhhhh
Q 036759 118 PIRKEELDLLIEYFKEAARAPCVVDISAKLSAVSANMT 155 (176)
Q Consensus 118 ~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 155 (176)
|.-.++-+.|++.+..........|+.+.+...+.+.|
T Consensus 25 pls~~E~~~L~~~i~~~~~~~~~~Dl~eiVeDvVY~yi 62 (64)
T PF14164_consen 25 PLSDEEWEELCKHIQERKNEEPDEDLHEIVEDVVYDYI 62 (64)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 34445555666665554434456677777776666554
No 61
>PF14605 Nup35_RRM_2: Nup53/35/40-type RNA recognition motif
Probab=20.19 E-value=1.5e+02 Score=15.27 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=20.0
Q ss_pred hHHHHHHHHhhCCeEEEecC-CeeEEEec--cHHHHH
Q 036759 26 PRALHKLAKIYGPIMHLRLG-LMTTIVVS--SPQAAE 59 (176)
Q Consensus 26 ~~~~~~~~~~yg~i~~~~~~-~~~~v~i~--~~~~i~ 59 (176)
.....+....+|.|....+. ..+.+.+. +...++
T Consensus 14 ~~~vl~~F~~fGeI~~~~~~~~~~~~~l~y~~~~~ae 50 (53)
T PF14605_consen 14 AEEVLEHFASFGEIVDIYVPESTNWMYLKYKSRKDAE 50 (53)
T ss_pred HHHHHHHHHhcCCEEEEEcCCCCcEEEEEECCHHHHH
Confidence 34444455678999988876 34444443 544443
Done!