BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036760
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
SV=1
Length = 329
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/303 (79%), Positives = 268/303 (88%)
Query: 10 EFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGG 69
E K +GL+KVVLR +R AE+YLYGG VTSWKND+GEELLF+SSKA FKPPKAIRGG
Sbjct: 25 ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGG 84
Query: 70 IPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPH 129
IPIC PQF + G+LE HGFARNRFWSID DPP P N + KA++DLILRP+EEDLKIWPH
Sbjct: 85 IPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPH 144
Query: 130 SFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDY 189
SFEFRLRVAL P GDL L SR+RNT+TDG+PFS+TFAYHTYF VSDISEVRVEGLET+DY
Sbjct: 145 SFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDY 204
Query: 190 LDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNP 249
LDNL+ KERFTEQGDAI FESEVDK+YL+ P+KIAI+DHEKK+TFV+ K+GLPDAVVWNP
Sbjct: 205 LDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNP 264
Query: 250 WDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSYCSGQLDPQ 309
WDKKAKAM DFGD EYK+MLCVE AAVEKPITLKPGEEW+GR+ LS VPSSYCSGQLDP
Sbjct: 265 WDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPL 324
Query: 310 KVL 312
KVL
Sbjct: 325 KVL 327
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
Length = 297
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 134/279 (48%), Gaps = 33/279 (11%)
Query: 29 SSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFAS------LGS 82
+S + YG V SWK EE L++S+ A K +RGGIP+ FP F L
Sbjct: 20 TSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSK 78
Query: 83 LESHGFARNRFW----SIDTDPPAFPTNSSSKAYIDLILRP---SEEDLKIWPHSFEFRL 135
L HG ARN W +PP + L+P + E K+WP + L
Sbjct: 79 LPQHGLARNSTWEFLGQTKENPPT----------VQFGLKPEIANPELTKLWPMDYLLIL 128
Query: 136 RVALTPGGDLMLIS-RVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQ 194
V L G D + + V NTS+ K F + +HTYF + DI V L + D L
Sbjct: 129 TVEL--GSDYLKTAIEVENTSS-SKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLL 185
Query: 195 NKERFTEQGDAITFESEVDKIY--LSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDK 252
KE + ++ +TF E D IY +S I I+D + + +++ LPD VVWNPW +
Sbjct: 186 -KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLPDTVVWNPWIE 243
Query: 253 KAKAMADFGDDE-YKHMLCVEAAAVEKPITLKPGEEWKG 290
K++ MADF Y+ M+C+E V I+L PG++W
Sbjct: 244 KSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNA 282
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
(strain K12) GN=yeaD PE=1 SV=2
Length = 294
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 21/275 (7%)
Query: 4 EKFLPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPP 63
E+ PV + + LD +V+ + A L G H+ SWK EE+L++S+ FK
Sbjct: 12 EQISPVLSRRKLDELDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNG 70
Query: 64 KAIRGGIPICFPQF--ASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSE 121
AIRGG+P+C+P F A+ L +HGFARN W++ + + + L SE
Sbjct: 71 VAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSH-----HEDADGVALTFELTQSE 125
Query: 122 EDLKIWPHSFEF--RLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEV 179
E K WPH F RV T DL + G+ F T A HTYF+V DI++V
Sbjct: 126 ETKKFWPHDFTLLAHFRVGKTCEIDL---------ESHGE-FETTSALHTYFNVGDIAKV 175
Query: 180 RVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKD 239
V GL ++D + + + TF D++YL+ I D R +
Sbjct: 176 SVSGLGD-RFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQ 234
Query: 240 GLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAA 274
+ V WNP + +M D DD YK +CVE A
Sbjct: 235 HHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETA 269
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
PE=3 SV=1
Length = 271
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 49/258 (18%)
Query: 49 EELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSS 108
+++L++S FK AIRGG+PIC+P F + +HG AR R W +
Sbjct: 53 QDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQ-PAHGTARIRLWQL------------ 99
Query: 109 SKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLI-SRVRNTSTDGKPFSFTF-- 165
S YI + ++R+ DL +I ++V TD +FT
Sbjct: 100 SHYYISV-----------------HKVRLEFELFSDLNIIEAKVSMVFTDKCHLTFTHYG 142
Query: 166 ------AYHTYFSVSDISEVRVEGL-ETLDYLDNLQNKERFTEQGDAITFESEVDKIYLS 218
A HTYF++ DI++V V+GL ET ++L ++ I+ VD IY +
Sbjct: 143 EESAQAALHTYFNIGDINQVEVQGLPETC--FNSLNQQQENVPSPRHIS--ENVDCIYSA 198
Query: 219 TPTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEK 278
+ ILD RT + V+WNPW KK M++ G Y+ MLC+E A +
Sbjct: 199 ENMQNQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSETG---YQKMLCLETARIHH 255
Query: 279 PITLKPGEEWKGRLELSG 296
L+ GE + L G
Sbjct: 256 --LLEFGESLSVEISLKG 271
>sp|Q9HMD2|PDXT_HALSA Glutamine amidotransferase subunit PdxT OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=pdxT PE=3
SV=1
Length = 203
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 137 VALTPGGDLMLISR----------VRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLET 186
V L PGG+ ISR +R+ GKP T A S +D ++ RVE T
Sbjct: 48 VLLLPGGESTAISRLLDREGIDAEIRSHVAAGKPLLATCA-GLIVSSTDANDDRVE---T 103
Query: 187 LDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVV 246
LD LD ++ F Q D +FE+ +D L+ P + R VI + G DA V
Sbjct: 104 LDVLDVTVDRNAFGRQVD--SFEAPLDVDGLADPFPAVFI-----RAPVIDEVG-ADATV 155
Query: 247 WNPWDKKAKAMAD 259
WD + A+ D
Sbjct: 156 LASWDGRPVAIRD 168
>sp|B0R879|PDXT_HALS3 Glutamine amidotransferase subunit PdxT OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=pdxT PE=3 SV=1
Length = 203
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 137 VALTPGGDLMLISR----------VRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLET 186
V L PGG+ ISR +R+ GKP T A S +D ++ RVE T
Sbjct: 48 VLLLPGGESTAISRLLDREGIDAEIRSHVAAGKPLLATCA-GLIVSSTDANDDRVE---T 103
Query: 187 LDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVV 246
LD LD ++ F Q D +FE+ +D L+ P + R VI + G DA V
Sbjct: 104 LDVLDVTVDRNAFGRQVD--SFEAPLDVDGLADPFPAVFI-----RAPVIDEVG-ADATV 155
Query: 247 WNPWDKKAKAMAD 259
WD + A+ D
Sbjct: 156 LASWDGRPVAIRD 168
>sp|O31907|YORG_BACSU SPBc2 prophage-derived uncharacterized protein YorG OS=Bacillus
subtilis (strain 168) GN=yorG PE=4 SV=1
Length = 323
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 46 DHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPT 105
D+ + +L++SS + K I+ A L E H FAR+RF IDT P F
Sbjct: 173 DNSDIVLYLSSNGVDEDRKVIKSS--------AWLAETEEH-FARSRFDYIDTYLPEFTA 223
Query: 106 NSSSKAYIDLILRPSE 121
+ KA I+ + R +
Sbjct: 224 ENLEKAIIEAVERQEQ 239
>sp|P06447|L_SENDZ RNA-directed RNA polymerase L OS=Sendai virus (strain Z) GN=L PE=1
SV=1
Length = 2228
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 80 LGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVAL 139
L + SH RFW+ P + N S++ I L L E + ++ H ++
Sbjct: 1531 LSNALSHPKIFKRFWNAGVVEPVYGPNLSNQDKILLALSVCEYSVDLFMHDWQ------- 1583
Query: 140 TPGGDLMLISRVRN--TSTDGKPFSFTFAYHTYF-SVSDISE--VRVEGLETLDYLDNLQ 194
GG + I N D + SF + Y S+++IS R+E + +L+ L++L+
Sbjct: 1584 --GGVPLEIFICDNDPDVADMRRSSFLARHLAYLCSLAEISRDGPRLESMNSLERLESLK 1641
Query: 195 NKERFTEQGDAITFESE----VDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPW 250
+ T D + S+ V K++ ST T I K V+R G+ V W
Sbjct: 1642 SYLELTFLDDPVLRYSQLTGLVIKVFPSTLTYI-----RKSSIKVLRTRGIGVPEVLEDW 1696
Query: 251 DKKA 254
D +A
Sbjct: 1697 DPEA 1700
>sp|Q06996|L_SENDF RNA-directed RNA polymerase L OS=Sendai virus (strain Fushimi) GN=L
PE=3 SV=1
Length = 2228
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 80 LGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVAL 139
L + SH RFW+ P + N S++ I L L E + ++ H ++
Sbjct: 1531 LSNALSHPKIFKRFWNAGVVEPVYGPNLSNQDKILLALSVCEYSVDLFMHDWQ------- 1583
Query: 140 TPGGDLMLISRVRN--TSTDGKPFSFTFAYHTYF-SVSDISE--VRVEGLETLDYLDNLQ 194
GG + I N D + SF + Y S+++IS R+E + +L+ L++L+
Sbjct: 1584 --GGVPLEIFICDNDPDVADMRRSSFLARHLAYLCSLAEISRDGPRLESMNSLERLESLK 1641
Query: 195 NKERFTEQGDAITFESE----VDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPW 250
+ T D + S+ V K++ ST T I K V+R G+ V W
Sbjct: 1642 SYLELTFLDDPVLRYSQLTGLVIKVFPSTLTYI-----RKSSIKVLRTRGIGVPEVLEDW 1696
Query: 251 DKKA 254
D +A
Sbjct: 1697 DPEA 1700
>sp|P06829|L_SENDE RNA-directed RNA polymerase L OS=Sendai virus (strain Enders) GN=L
PE=3 SV=2
Length = 2228
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 80 LGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVAL 139
L + SH RFW+ P + N S++ I L L E + ++ H ++
Sbjct: 1531 LSNALSHPKIFKRFWNAGVVEPVYGPNLSNQDKILLALSVCEYSVDLFMHDWQ------- 1583
Query: 140 TPGGDLMLISRVRN--TSTDGKPFSFTFAYHTYF-SVSDISE--VRVEGLETLDYLDNLQ 194
GG + I N D + SF + Y S+++IS R+E + +L+ L++L+
Sbjct: 1584 --GGVPLEIFICDNDPDVADMRRSSFLARHLAYLCSLAEISRDGPRLESMNSLERLESLK 1641
Query: 195 NKERFTEQGDAITFESE----VDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVVWNPW 250
+ T D + S+ V K++ ST T I K V+R G+ V W
Sbjct: 1642 SYLELTFLDDPVLRYSQLTGLVIKVFPSTLTYI-----RKSSIKVLRTRGIGVPEVLEDW 1696
Query: 251 DKKA 254
D +A
Sbjct: 1697 DPEA 1700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,172,339
Number of Sequences: 539616
Number of extensions: 5305309
Number of successful extensions: 11425
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11402
Number of HSP's gapped (non-prelim): 21
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)