Query 036760
Match_columns 315
No_of_seqs 206 out of 1252
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 08:20:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036760.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036760hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hta_A Putative enzyme related 100.0 2.2E-52 7.4E-57 386.2 29.0 274 8-297 32-307 (309)
2 2cir_A Hexose-6-phosphate muta 100.0 4.3E-52 1.5E-56 382.2 27.0 271 16-298 5-290 (297)
3 1jov_A HI1317; hypothetical pr 100.0 1.2E-50 4.1E-55 367.6 26.9 257 8-295 12-269 (270)
4 3k25_A SLR1438 protein; struct 100.0 1E-49 3.5E-54 364.9 29.2 263 9-298 2-288 (289)
5 3q1n_A Galactose mutarotase re 100.0 5E-43 1.7E-47 321.3 27.4 246 20-296 2-293 (294)
6 3dcd_A Galactose mutarotase re 100.0 8E-43 2.7E-47 321.5 27.6 247 20-300 2-295 (307)
7 3nre_A Aldose 1-epimerase; str 100.0 8.4E-42 2.9E-46 312.6 25.9 247 17-299 1-291 (291)
8 3os7_A Galactose mutarotase-li 100.0 3.2E-42 1.1E-46 322.2 22.7 260 14-298 14-340 (341)
9 3mwx_A Aldose 1-epimerase; str 100.0 4.7E-42 1.6E-46 319.2 21.8 261 14-299 10-324 (326)
10 1yga_A Hypothetical 37.9 kDa p 100.0 1E-39 3.6E-44 305.4 22.6 264 14-297 6-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 2.4E-38 8.4E-43 296.2 19.7 260 16-297 19-342 (344)
12 1lur_A Aldose 1-epimerase; vit 100.0 6.3E-37 2.1E-41 286.0 19.9 262 16-298 11-337 (339)
13 1nsx_A Galactose mutarotase; e 100.0 6.1E-37 2.1E-41 286.8 19.2 262 17-299 11-339 (347)
14 3imh_A Galactose-1-epimerase; 100.0 2.2E-35 7.5E-40 274.3 22.2 265 15-299 15-332 (338)
15 1z45_A GAL10 bifunctional prot 100.0 4.1E-34 1.4E-38 290.5 21.9 264 15-297 370-699 (699)
16 3ty1_A Hypothetical aldose 1-e 99.9 2.9E-23 9.9E-28 196.2 19.8 262 15-298 45-353 (384)
17 3bs6_A Inner membrane protein 93.7 0.98 3.3E-05 39.9 12.7 123 19-164 4-136 (280)
18 3blc_A Inner membrane protein 92.1 1.9 6.6E-05 39.0 12.5 123 18-163 34-166 (330)
19 3isy_A Bsupi, intracellular pr 63.1 18 0.00062 27.6 6.1 33 130-165 6-38 (120)
20 4ep8_B Urease subunit beta; al 60.5 9.5 0.00033 28.0 3.9 31 137-172 13-43 (101)
21 1k1x_A 4-alpha-glucanotransfer 54.2 1.7E+02 0.0059 28.8 14.6 37 14-51 394-432 (659)
22 4ubp_B Protein (urease (chain 50.7 14 0.00049 28.2 3.5 30 137-171 19-48 (126)
23 4ac7_B Urease subunit beta; hy 50.7 14 0.00049 28.2 3.5 30 137-171 19-48 (126)
24 2kl8_A OR15; structural genomi 35.9 36 0.0012 22.8 3.3 19 131-150 29-47 (85)
25 1yew_A Particulate methane mon 31.9 54 0.0019 29.8 4.8 29 133-164 255-283 (382)
26 3rfr_A PMOB; membrane, oxidore 28.2 57 0.0019 30.1 4.4 29 133-164 289-317 (419)
27 3qga_A UREA2, fusion of urease 28.1 35 0.0012 28.7 2.7 41 126-171 105-147 (225)
28 1e9y_A Urease subunit alpha; h 24.5 36 0.0012 28.9 2.1 41 126-171 106-147 (238)
29 4fnq_A Alpha-galactosidase AGA 23.6 3.5E+02 0.012 26.9 9.7 67 110-185 130-199 (729)
No 1
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=2.2e-52 Score=386.19 Aligned_cols=274 Identities=29% Similarity=0.489 Sum_probs=239.4
Q ss_pred ceEEEecCCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCC--CCCC
Q 036760 8 PVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG--SLES 85 (315)
Q Consensus 8 ~~~~~~~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~--~~~~ 85 (315)
.+++.. .++++.++|+|+ +++|+|..+||+|+||+.++|+|+||.++.+.|...+++|||+|+||||+||+. .+++
T Consensus 32 ~~~~~~-~~~~~~~~L~n~-~~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~~ 109 (309)
T 2hta_A 32 VLSRRQ-LDDLDLIVVDHP-QVKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLPS 109 (309)
T ss_dssp SEEEEE-ETTEEEEEEEET-TEEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCCT
T ss_pred ceEEee-cCCceEEEEeCC-CeEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCCCCC
Confidence 377876 889999999999 599999999999999998656899999888888888899999999999999996 5799
Q ss_pred ceeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEee
Q 036760 86 HGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTF 165 (315)
Q Consensus 86 HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~ 165 (315)
|||+|++.|++++... +++.++++|+|.++++++++|||+|+++++|+| + ++|+++++++| +|||++
T Consensus 110 HGfar~~~W~v~~~~~-----~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~-~~L~i~~~~~N------~~~~~~ 176 (309)
T 2hta_A 110 HGFARNLPWALKAHNE-----DDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-G-KTCEIELEAHG------EFATTS 176 (309)
T ss_dssp TBSGGGSBCEEEEEEE-----CSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-S-SSEEEEEEEES------SEEEEE
T ss_pred ccCcCCCceEEEeEec-----CCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-C-CceEEEEEEEC------CeEehh
Confidence 9999999999987631 122367999999877788999999999999999 7 89999999975 799999
Q ss_pred eccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCCCeEEEEeCCCCcEEEEEeCCCCcEE
Q 036760 166 AYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAV 245 (315)
Q Consensus 166 g~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~v~~~~~~~~v 245 (315)
|+||||+++++.++.+.++ +..|+|++++++.....+..++|..++|++|.+....++|.++.+++.|+|.++++|++|
T Consensus 177 g~H~YFnl~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~ 255 (309)
T 2hta_A 177 ALHSYFNVGDIANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVV 255 (309)
T ss_dssp EECCEEECSCGGGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEE
T ss_pred cCCceEecCCccceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEE
Confidence 9999999998777888877 677888777766544556778999999999986556789999999999999998899999
Q ss_pred EeCCccchhccccCCCCCCCCceEEEceeeecCceEeCCCCEEEEEEEEEEe
Q 036760 246 VWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGV 297 (315)
Q Consensus 246 vw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~~~ 297 (315)
||||+.++++.|.|+.+++|++|||||||+..+.++|+|||+|+.+++|++.
T Consensus 256 vwtp~~~~~~~~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 256 GWNPGPALSVSMGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEECHHHHHHHCTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred EECCCcccccccccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 9999755666778888888899999999998778999999999999999986
No 2
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=4.3e-52 Score=382.23 Aligned_cols=271 Identities=34% Similarity=0.629 Sum_probs=231.2
Q ss_pred CCceEEEEecCCCc--EEEEEcCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCC------CCCCce
Q 036760 16 NGLDKVVLRESRGS--SAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG------SLESHG 87 (315)
Q Consensus 16 ~~~~~~~L~n~~~~--~a~I~~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~------~~~~HG 87 (315)
+++..++|+|+++. +++|..+||+|+||+. +|+|+||.++.+.|...+++|||+|+||||+||+. ++++||
T Consensus 5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~-~G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG 83 (297)
T 2cir_A 5 ETDKEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG 83 (297)
T ss_dssp ECSSEEEEEETTEEEEEEEEETBTTEEEEEEE-TTEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred cCCCEEEEeCCCCceeEEEEECCCcEEEEEEe-CCeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence 46789999999656 8999999999999998 57899999888888888999999999999999986 679999
Q ss_pred eeecCCcEEeccCCCCCCCCCCceEEEEEeCC---CcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCC-CccEEE
Q 036760 88 FARNRFWSIDTDPPAFPTNSSSKAYIDLILRP---SEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTD-GKPFSF 163 (315)
Q Consensus 88 f~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~-~~~~p~ 163 (315)
|+|++.|++++.. +++..+++|+|.+ +++++++|||+|+++++|+|.+ ++|+++++++|+ + +++|||
T Consensus 84 far~~~W~v~~~~------~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~-~~L~i~~~~~N~--~~d~~~~~ 154 (297)
T 2cir_A 84 LARNSTWEFLGQT------KENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGS-DYLKTAIEVENT--SSSKELKF 154 (297)
T ss_dssp SGGGSBCEEEEEE------EETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECS-SEEEEEEEEECC--CSSCCEEE
T ss_pred ccCCCceEEEeec------cCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcC-CEEEEEEEEEcC--CCCcceEE
Confidence 9999999998652 1223679999998 7888999999999999999998 999999999999 9 999999
Q ss_pred eeeccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCC--CeEEEEeCCCCcEEEEEeCCC
Q 036760 164 TFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTP--TKIAILDHEKKRTFVIRKDGL 241 (315)
Q Consensus 164 ~~g~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~--~~~~l~d~~~~~~i~v~~~~~ 241 (315)
++|+||||+++++.++.+.|+++..++|.... .........+.+..++|++|.... ..++|.++ +++.|+|.++++
T Consensus 155 ~~~~H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~ 232 (297)
T 2cir_A 155 NWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNL 232 (297)
T ss_dssp EEEECCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESC
T ss_pred eeecCceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCC
Confidence 99999999999888888888876667775432 333333456777788999997654 57889999 999999999889
Q ss_pred CcEEEeCCccchhccccCC-CCCCCCceEEEceeeecCceEeCCCCEEEEEEEEEEee
Q 036760 242 PDAVVWNPWDKKAKAMADF-GDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVP 298 (315)
Q Consensus 242 ~~~vvw~p~~~~~~~~~d~-~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~~~~ 298 (315)
|++|||||+.++++.|+++ .+.+|++|||||||+..+.++|+|||+|+.+++|++..
T Consensus 233 p~~~v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~~~ 290 (297)
T 2cir_A 233 PDTVVWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEE 290 (297)
T ss_dssp CEEEEEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEECC-
T ss_pred CcEEEECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEEEe
Confidence 9999999965555566676 66678899999999987789999999999999999963
No 3
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=1.2e-50 Score=367.59 Aligned_cols=257 Identities=28% Similarity=0.505 Sum_probs=218.2
Q ss_pred ceEEEecCCCceEEEEecCCCcEEEEEcCCeEEEEEEeC-CCeeEEEeCCCCCCCCCCCccccccEEccccCCCCCCCCc
Q 036760 8 PVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKND-HGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESH 86 (315)
Q Consensus 8 ~~~~~~~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~~~~~H 86 (315)
.+++.. .++++.++|+|+. .+|+|..+||+|+||+.+ +|+|+||.++.+.|+..+++|||+|+||||+||+. +++|
T Consensus 12 ~~~~~~-~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~-~~~H 88 (270)
T 1jov_A 12 ELHLVQ-HNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK-QPAH 88 (270)
T ss_dssp TEEEEE-ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS-SSTT
T ss_pred ceEEee-eCCceEEEEeCCC-cEEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCCC-CCCC
Confidence 367765 8999999999995 899999999999999985 57899999999999999999999999999999975 7999
Q ss_pred eeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEeee
Q 036760 87 GFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFA 166 (315)
Q Consensus 87 Gf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g 166 (315)
||||++.|+|++... +++...++|.+.+++ +.|+++++|+|. |+++++|+|+ +++ ||++|
T Consensus 89 GfaR~~~W~v~~~~~-----~~~~v~l~~~l~~~~-------~~f~l~~~~~L~----l~~~~~v~N~--g~~--p~~~g 148 (270)
T 1jov_A 89 GTARIRLWQLSHYYI-----SVHKVRLEFELFSDL-------NIIEAKVSMVFT----DKCHLTFTHY--GEE--SAQAA 148 (270)
T ss_dssp BSGGGSBCEEEEEEE-----ETTEEEEEEEEECTT-------SCEEEEEEEEES----SSEEEEEEEC--CSS--CEEEE
T ss_pred ceecCCCcEEeeecc-----CCCcEEEEEEECCCc-------cccEEEEEEEEC----CeEEEEEEeC--Cch--hHhhh
Confidence 999999999997731 133457788877542 348899999995 6788889999 875 68999
Q ss_pred ccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecCCCcceEEeCCCCeEEEEeCCCCcEEEEEeCCCCcEEE
Q 036760 167 YHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLPDAVV 246 (315)
Q Consensus 167 ~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~d~~~~~~i~v~~~~~~~~vv 246 (315)
+||||+++++.++++.++. ..|+|+++.... ...+.+.+.+++|++|.+++..++|.|++.++.|+|..++++++||
T Consensus 149 ~HpyF~v~d~~~~~v~g~~-~~~~d~l~~~~~--~~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vv 225 (270)
T 1jov_A 149 LHTYFNIGDINQVEVQGLP-ETCFNSLNQQQE--NVPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVL 225 (270)
T ss_dssp ECCEEECSCGGGEEEESCC-SEEEETTTTEEE--ECCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEE
T ss_pred cccceecCCcceEEEECCC-CcceeccCCccc--ccCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEEE
Confidence 9999999988889999984 478888765432 2345677888999999988778999999999999999999999999
Q ss_pred eCCccchhccccCCCCCCCCceEEEceeeecCceEeCCCCEEEEEEEEE
Q 036760 247 WNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELS 295 (315)
Q Consensus 247 w~p~~~~~~~~~d~~~~~~~~fvCvEP~~~~~~~~L~PGe~~~~~~~i~ 295 (315)
|||+. +.|+||.+++|++||||||+.+ .+.|+|||+++.+++|+
T Consensus 226 WnP~~---~~~~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 226 WNPWH---KKTSGMSETGYQKMLCLETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp EECTT---SCCTTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEEC
T ss_pred ECCCc---ccccccccccCccEEEeCcccc--ceEECCCCEEEEEEEEE
Confidence 99974 3588999999999999999764 47899999998888764
No 4
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=1e-49 Score=364.95 Aligned_cols=263 Identities=21% Similarity=0.386 Sum_probs=220.5
Q ss_pred eEEEecCCCceEEEEecCC-CcEEEEE-cCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCC-----
Q 036760 9 VEFCKGNNGLDKVVLRESR-GSSAEVY-LYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG----- 81 (315)
Q Consensus 9 ~~~~~~~~~~~~~~L~n~~-~~~a~I~-~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~----- 81 (315)
..+++..++++.++|+|++ +.++.|. .+||+|+||+. +|+|+||.++.++++...+++||+|+||||+||+.
T Consensus 2 ~~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~-~g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~ 80 (289)
T 3k25_A 2 YNISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV-QGQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFN 80 (289)
T ss_dssp EEEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE-TTEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEE
T ss_pred cceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEe-CCEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEE
Confidence 3456668889999999985 8999987 89999999998 68899998776677767789999999999999994
Q ss_pred ------CCCCceeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCC
Q 036760 82 ------SLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTS 155 (315)
Q Consensus 82 ------~~~~HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n 155 (315)
++++|||+|++.|++++.. +++..+++|+|.++++++++|||+|+++++|+|.+ ++|+++++++|+
T Consensus 81 ~~g~~y~l~~HGf~r~~~W~~~~~~------~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~L~i~~~~~N~- 152 (289)
T 3k25_A 81 HAGKSYRLKQHGFARDLPWEVIGQQ------TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQG-HSLRIEQRIANL- 152 (289)
T ss_dssp ETTEEEECCTTBSGGGSCCEEEEEE------CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEET-TEEEEEEEEEEC-
T ss_pred ECCEEeecCCCCCcccCCeEEEEec------CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeC-CEEEEEEEEEcC-
Confidence 5799999999999998763 23456899999987778899999999999999997 899999999999
Q ss_pred CCCccEEEeeeccceeecCCcceeEEEcCCCCceeecCCccceeeecCCeeecC-CCcceEEeCC-CCeEEEEeCCCCcE
Q 036760 156 TDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAITFE-SEVDKIYLST-PTKIAILDHEKKRT 233 (315)
Q Consensus 156 ~~~~~~p~~~g~HpYF~~~~~~~~~i~gl~~~~~~d~l~~~~~~~~~~~~~~~~-~~~D~~y~~~-~~~~~l~d~~~~~~ 233 (315)
++++|||++|+||||++++..++++.++. ..|+|.... .... ..+.+.+. .++|++|.+. ...++|.++..+++
T Consensus 153 -~~~~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~-~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~ 228 (289)
T 3k25_A 153 -GDQRMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTG-DCHG-YDGQLNLTSPELDLAFTQISQPRAHFIDPDRNLK 228 (289)
T ss_dssp -SSSCEEECCEECCEEECSCCTTCEEECSC-SEEEETTTC-CEEE-CCSCCCTTSSEEEEEECCCSSSEEEEEETTTTEE
T ss_pred -CCCcceeEEecCcEEccCCcceEEEEcCc-ccccccccC-cccc-cCCcccCCchhhceEeecCCCCeEEEEECCCCCE
Confidence 99999999999999999998889998764 566764332 2211 22344543 5789999876 35789999999999
Q ss_pred EEEEeCC-CCcEEEeCCccchhccccCCCCCCCCceEEEceeee--------cCceEeCCCCEEEEEEEEEEee
Q 036760 234 FVIRKDG-LPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV--------EKPITLKPGEEWKGRLELSGVP 298 (315)
Q Consensus 234 i~v~~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~--------~~~~~L~PGe~~~~~~~i~~~~ 298 (315)
|+|..++ ++++|||||.. ++|||||||++ .+.++|+|||+++.+++|+++.
T Consensus 229 i~v~~~~~~~~~vvw~~~~--------------~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~v~~ 288 (289)
T 3k25_A 229 IEVSFSELYQTLVLWTVAG--------------KDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQVST 288 (289)
T ss_dssp EEEEECTTCCEEEEEEESS--------------SCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEEEEC
T ss_pred EEEEeCCCCcEEEEEecCC--------------CCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEEEEe
Confidence 9999886 89999999732 57999999984 3579999999999999999863
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=5e-43 Score=321.27 Aligned_cols=246 Identities=21% Similarity=0.367 Sum_probs=192.2
Q ss_pred EEEEecCCCcEEEEEcCCeEEEEEEeC-CCeeEEEeCCCCCCCCCCCccccccEEccccCCCC-----------CCCCce
Q 036760 20 KVVLRESRGSSAEVYLYGGHVTSWKND-HGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG-----------SLESHG 87 (315)
Q Consensus 20 ~~~L~n~~~~~a~I~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~-----------~~~~HG 87 (315)
+++|+|+ +++|+|..+||+|+||+.+ +|+|+||..+.++|. ++.|+||||+||+. ++++||
T Consensus 2 ~~~l~n~-~~~~~i~~~Ga~l~s~~~~~~g~e~l~~~~~~~~~------~~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HG 74 (294)
T 3q1n_A 2 MITIENS-KFKAGIAERGAELQSLVNKADNYEYVWTGDKTFWN------RHAPILFPSIGKSNQDQYRLGAKTYPMSQHG 74 (294)
T ss_dssp EEEEECS-SEEEEEETBTTEEEEEEETTTTEECBCCCCTTTCS------CSCCEEBSCCSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECC-CEEEEEEccCcEEEEEEeCCCCCEEEEcCChhhcc------CCCCEEEeccCCcCCCEEEECCcEEccCCCC
Confidence 6899999 5999999999999999974 689999998877775 45899999999994 579999
Q ss_pred eeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEeeec
Q 036760 88 FARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAY 167 (315)
Q Consensus 88 f~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~ 167 (315)
|+|++.|++++.+ .++++|++.+.+.++++|||+|+++++|+|.+ ++|+++++++|+ ++++|||++|+
T Consensus 75 f~r~~~w~~~~~~---------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~~~N~--~~~~~p~~~~~ 142 (294)
T 3q1n_A 75 FARDYDFDVSDKS---------DSAVTFTQHQNAETLKKFPFEYTLAVTYMLTD-GGLSVHYTVTND--DSKSMPFALGF 142 (294)
T ss_dssp SGGGSBCEEESCC---------SSEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEEC--SSSCEEECEEE
T ss_pred CccCcceEEEEcc---------CCEEEEEEEcCcchhhcCCeEEEEEEEEEEeC-CEEEEEEEEEcC--CCCceeeeEec
Confidence 9999999998763 45799999987766899999999999999997 899999999999 99999999999
Q ss_pred cceeecCC-----cce--eEEEcCC-CCcee--e--cCCccceeee---cCCeeecCC-Ccce-EE-eC-C-CCeEEEEe
Q 036760 168 HTYFSVSD-----ISE--VRVEGLE-TLDYL--D--NLQNKERFTE---QGDAITFES-EVDK-IY-LS-T-PTKIAILD 227 (315)
Q Consensus 168 HpYF~~~~-----~~~--~~i~gl~-~~~~~--d--~l~~~~~~~~---~~~~~~~~~-~~D~-~y-~~-~-~~~~~l~d 227 (315)
||||+++. +.+ ++|..-. ...++ | .+++++.... ....+.+.. .+|+ .| .+ . ...++|.+
T Consensus 143 H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~ 222 (294)
T 3q1n_A 143 HPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLAS 222 (294)
T ss_dssp CCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEEC
T ss_pred CcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEe
Confidence 99999973 223 4454322 11132 2 3444332211 123344443 3553 33 33 2 34788999
Q ss_pred CCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee--------------cCceEeCCCCEEEEEEE
Q 036760 228 HEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV--------------EKPITLKPGEEWKGRLE 293 (315)
Q Consensus 228 ~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~--------------~~~~~L~PGe~~~~~~~ 293 (315)
+.+++.|+|.++++|+++||+|.... .+|||||||++ .+.++|+|||+++.+++
T Consensus 223 ~~~g~~l~v~~~~~p~l~iwt~~~~~------------~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~ 290 (294)
T 3q1n_A 223 PHHDHSITLDISDFPYLTIWSPEHKK------------APFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALK 290 (294)
T ss_dssp TTCSCCEEEECTTCSEEEEECCTTSC------------CSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEE
T ss_pred CCCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEE
Confidence 99999999999889999999984211 46999999973 14699999999999999
Q ss_pred EEE
Q 036760 294 LSG 296 (315)
Q Consensus 294 i~~ 296 (315)
|++
T Consensus 291 I~i 293 (294)
T 3q1n_A 291 VEL 293 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=8e-43 Score=321.54 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=192.4
Q ss_pred EEEEecCCCcEEEEEcCCeEEEEEEeC-CCeeEEEeCCCCCCCCCCCccccccEEccccCCCC-----------CCCCce
Q 036760 20 KVVLRESRGSSAEVYLYGGHVTSWKND-HGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG-----------SLESHG 87 (315)
Q Consensus 20 ~~~L~n~~~~~a~I~~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~-----------~~~~HG 87 (315)
+++|+|+ +++|+|..+||+|+||+.+ +|+|+||..+.++|. +|+|+||||+||+. ++++||
T Consensus 2 ~~~l~n~-~~~~~i~~~GA~l~s~~~~~~~~e~l~~~~~~~~~------~~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 2 DYTIENN-MIKVVISDHGAEIQSVKSAHTDEEFMWQANPEIWG------RHAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEEEECS-SEEEEEETBTTEEEEEEETTTCCBCBCCCCTTTCC------CSSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECC-CEEEEEEccCcEEEEEEECCCCcEEEECCChhhcC------CCCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 5899999 4999999999999999974 578999988877775 56899999999994 579999
Q ss_pred eeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEeeec
Q 036760 88 FARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAY 167 (315)
Q Consensus 88 f~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~ 167 (315)
|+|++.|++++.+ .++|+|++.+++++.++|||+|+++++|+|.+ ++|+++++++|+ ++++|||++|+
T Consensus 75 f~r~~~w~v~~~~---------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~-~~L~i~~~v~N~--g~~~~p~~~g~ 142 (307)
T 3dcd_A 75 FARNADFEVENHT---------KESITFLLKDNEETRKVYPFKFEFRVNYNLMN-NLLEENFSVVNK--SDETMIFGVGG 142 (307)
T ss_dssp SGGGSBCEEEEEE---------TTEEEEEEECCHHHHHHSCCCEEEEEEEEEET-TEEEEEEEEEEC--SSSCEEECEEE
T ss_pred CccCcEEEEEEec---------CCEEEEEEecCcchhhhCCCceEEEEEEEEeC-CEEEEEEEEECC--CCCcEeEEEEc
Confidence 9999999998763 45799999987778899999999999999997 999999999999 99999999999
Q ss_pred cceeecCC-----cce--eEEEcCCCCceee--cCCccce------eeecCCeeecCC-Ccc--e-EEeCCC--CeEEEE
Q 036760 168 HTYFSVSD-----ISE--VRVEGLETLDYLD--NLQNKER------FTEQGDAITFES-EVD--K-IYLSTP--TKIAIL 226 (315)
Q Consensus 168 HpYF~~~~-----~~~--~~i~gl~~~~~~d--~l~~~~~------~~~~~~~~~~~~-~~D--~-~y~~~~--~~~~l~ 226 (315)
||||+++. ..+ ++|.. ...++ .++++.. .......+.++. .+| . +|.+.. ..++|.
T Consensus 143 HpyF~~~~~~~~~~~d~~L~~~a---~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~ 219 (307)
T 3dcd_A 143 HPGFNLPTDHGENKEDFYFDMHP---SVTRVRIPLKDASLDWNNRSLAPTDSLIALSDDLFKDDALIYELRGNDNKVSLR 219 (307)
T ss_dssp CCEEECCCTTSCCGGGEEEEEES---CCCEEECCEETTEECGGGCEEECTTSCEECCSGGGTTSCEEEECCSSCEEEEEE
T ss_pred CcEEEcCCCCCCccccEEEEEcC---CCceeeeecCCcccccccccccccCCcccCCHHHcCCceEEEcCCCCceEEEEE
Confidence 99999974 233 44442 12221 1122210 001122344443 344 2 344432 468899
Q ss_pred eCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee--------------cCceEeCCCCEEEEEE
Q 036760 227 DHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV--------------EKPITLKPGEEWKGRL 292 (315)
Q Consensus 227 d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~--------------~~~~~L~PGe~~~~~~ 292 (315)
++.+++.|+|..++||+++||+|.... .+|||||||++ .+.++|+|||+++.++
T Consensus 220 ~~~~g~~v~v~~~~fp~l~iwt~~~~~------------~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~ 287 (307)
T 3dcd_A 220 TDKNKFHVNVWTRDAPFVGIWSQYPKT------------DNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGF 287 (307)
T ss_dssp ETTSSCEEEEEEETCSEEEEECCSSSC------------CSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEE
T ss_pred eCCCCcEEEEEECCCCEEEEECcCCCC------------CCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEE
Confidence 998999999998889999999983211 46999999983 1469999999999999
Q ss_pred EEEEeecC
Q 036760 293 ELSGVPSS 300 (315)
Q Consensus 293 ~i~~~~~~ 300 (315)
+|++...+
T Consensus 288 ~i~~~~~~ 295 (307)
T 3dcd_A 288 SMTYHSTT 295 (307)
T ss_dssp EEEEECSS
T ss_pred EEEEEECC
Confidence 99998653
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=8.4e-42 Score=312.58 Aligned_cols=247 Identities=16% Similarity=0.184 Sum_probs=198.2
Q ss_pred CceEEEEecCCCcEEEEEcC-CeEEEEEEeCCCeeEEEeCCCCCCCCCCCccccccEEccccCCCC--------------
Q 036760 17 GLDKVVLRESRGSSAEVYLY-GGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG-------------- 81 (315)
Q Consensus 17 ~~~~~~L~n~~~~~a~I~~~-Ga~l~s~~~~~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~-------------- 81 (315)
|+++++|+|+ +++|+|..+ ||+|+|| . +|+|+||..+. . ..++++|.|+||||+||+.
T Consensus 1 g~~~~~l~n~-~~~~~i~~~~Ga~l~s~-~-~g~~vl~~~~~-~---~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~ 73 (291)
T 3nre_A 1 GMTIYTLSHG-SLKLDVSDQGGVIEGFW-R-DTTPLLRPGKK-S---GVATDASCFPLVPFANRVSGNRFVWQGREYQLQ 73 (291)
T ss_dssp CCCEEEEEET-TEEEEEETBTTEEEEEE-E-TTEESSCCCCC-S---SCGGGSSEEEEBSCCSBCGGGEEEETTEEEECC
T ss_pred CccEEEEcCC-CEEEEEEcccCceEEEE-e-CCCEEEECCCc-c---cCccccCCcEEEeeCCEecCCEEEECCEEEECC
Confidence 5789999999 599999985 9999999 5 68999987763 2 4567888999999999984
Q ss_pred ------CCCCceeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeCC
Q 036760 82 ------SLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTS 155 (315)
Q Consensus 82 ------~~~~HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~n 155 (315)
.+++|||+|.+.|++++.+ .++++|++.+ + + |||+|+++++|+|++ ++|+++++++|+
T Consensus 74 ~N~~~~~~~~HG~~~~~~W~~~~~~---------~~~v~l~l~~-~---~-~P~~~~~~v~y~L~~-~~L~i~~~~~N~- 137 (291)
T 3nre_A 74 PNVEWDAHYLHGDGWLGEWQCVSHS---------DDSLCLVYEH-R---S-GVYHYRVSQAFHLTA-DTLTVTLSVTNQ- 137 (291)
T ss_dssp CCSTTCSSCBSBSGGGSBCEEEEEC---------SSEEEEEEEE-E---S-SSCEEEEEEEEEECS-SEEEEEEEEEEC-
T ss_pred CCCCCCCCCCCCchhcceeEEEEcc---------CCEEEEEEeC-C---C-CCceEEEEEEEEEeC-CeEEEEEEEEEC-
Confidence 2479999999999998763 3468888874 2 6 999999999999997 999999999999
Q ss_pred CCCccEEEeeeccceeecCCcceeEEEcCCCCceee----cCCccceeeecCCeeecC-------CCcceEEeCCCCeEE
Q 036760 156 TDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLD----NLQNKERFTEQGDAITFE-------SEVDKIYLSTPTKIA 224 (315)
Q Consensus 156 ~~~~~~p~~~g~HpYF~~~~~~~~~i~gl~~~~~~d----~l~~~~~~~~~~~~~~~~-------~~~D~~y~~~~~~~~ 224 (315)
++++|||++|+||||++++...+++. +..|++ .+|+++.. ..+..++|. .++|++|......++
T Consensus 138 -~~~~~~~~~~~H~YFnl~~~~~l~i~---a~~~~~~d~~~iPtg~~~-v~~t~~df~~~~~l~~~~~D~~f~~~~~~a~ 212 (291)
T 3nre_A 138 -GAETLPFGTGWHPYFPLSPQTRIQAQ---ASGYWLEREQWLAGEFCE-QLPQELDFNQPAPLPRQWVNNGFAGWNGQAR 212 (291)
T ss_dssp -SSSCEEECCEEEEEEECCTTCEEEEC---CSEEEEECGGGCEEEEES-SCCGGGCCSSCEECCSSCEEEEEESCCSEEE
T ss_pred -CCCCccceEEcCccEecCCCeEEEEE---CCEEEEcCCCcCCCcccc-CCCCcccccCCcCCCCccccceeecCCccEE
Confidence 99999999999999999876666665 345542 46666542 234556664 368999987767899
Q ss_pred EEeCCCCcEEEEEeCC-CCcEEEeCCccchhccccCCCCCCCC-ceEEEceeee-----c-----CceEeCCCCEEEEEE
Q 036760 225 ILDHEKKRTFVIRKDG-LPDAVVWNPWDKKAKAMADFGDDEYK-HMLCVEAAAV-----E-----KPITLKPGEEWKGRL 292 (315)
Q Consensus 225 l~d~~~~~~i~v~~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~-~fvCvEP~~~-----~-----~~~~L~PGe~~~~~~ 292 (315)
|.++.++++|+|.++. ++.+|||||+... +..|+ .|||||||+. + +.++|+|||+++.++
T Consensus 213 l~~~~~g~~l~v~t~~p~~~~~vyt~~~~~--------~~~~~~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~ 284 (291)
T 3nre_A 213 IEQPQEGYAIIMETTPPAPCYFIFVSDPAF--------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEM 284 (291)
T ss_dssp EEEGGGTEEEEEEEESCCSEEEEEECCTTT--------CTTCCSCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEE
T ss_pred EEECCCCeEEEEEeCCCCceEEEEcCCCCC--------CCCccCCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEE
Confidence 9999999999999873 2248999996211 12344 7999999962 2 469999999999999
Q ss_pred EEEEeec
Q 036760 293 ELSGVPS 299 (315)
Q Consensus 293 ~i~~~~~ 299 (315)
+|++.++
T Consensus 285 ~~~~~~~ 291 (291)
T 3nre_A 285 SLRVEWL 291 (291)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9998763
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.2e-42 Score=322.17 Aligned_cols=260 Identities=24% Similarity=0.383 Sum_probs=199.9
Q ss_pred cCCCceEEEEecCCCcEEEEE-cCCeEEEEEEeC-CCeeEEEeCCC----CCCCCCCCccccccEEccccCCCC------
Q 036760 14 GNNGLDKVVLRESRGSSAEVY-LYGGHVTSWKND-HGEELLFVSSK----ATFKPPKAIRGGIPICFPQFASLG------ 81 (315)
Q Consensus 14 ~~~~~~~~~L~n~~~~~a~I~-~~Ga~l~s~~~~-~g~evL~~~~~----~~~~~~~~irgG~pilfP~~gr~~------ 81 (315)
.++|++.++|+|+ +++|+|. .+||+|+||+.+ +|+++||..+. +.|. .+++++|+||||| +|||.
T Consensus 14 ~~~g~~~~~L~n~-~~~~~i~p~~Ga~l~s~~~~~~g~~~l~~~~~~~~~~~y~-~~~~~~G~pv~~p-~nRi~~g~f~~ 90 (341)
T 3os7_A 14 IWSEHKCIRFAAG-GYEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFK-NRPQVYGLPVLFP-PNRIDDGTFKL 90 (341)
T ss_dssp ETTTEEEEEEEET-TEEEEEETTTTTEEEEEEETTTTEECBCCCCTTCCHHHHH-HSGGGSSCCEESS-CSEEETTEEEE
T ss_pred EECCEEEEEEeCC-CEEEEEchhcCCEEEEEEeCCCCCeEEEcCCcccchhhhh-hCCcccceeEeCC-CCcccCCEEEE
Confidence 4899999999999 5999998 899999999984 47999998775 2333 4678899999999 59873
Q ss_pred -----CCC---------CceeeecCCcEEeccCCCCCCCCCCceEE--EEEeCCCcchhccCCcceEEEEEEEECCCCcE
Q 036760 82 -----SLE---------SHGFARNRFWSIDTDPPAFPTNSSSKAYI--DLILRPSEEDLKIWPHSFEFRLRVALTPGGDL 145 (315)
Q Consensus 82 -----~~~---------~HGf~r~~~W~v~~~~~~~~~~~~~~~~v--~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L 145 (315)
+++ +|||+|.+.|+|+.... +++...| +|.+.+.++++++|||+|+++++|+|.+ ++|
T Consensus 91 ~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~-----~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~-~~L 164 (341)
T 3os7_A 91 GDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKI-----DQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSS-KGL 164 (341)
T ss_dssp TTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEE-----ETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEET-TEE
T ss_pred CCEEEEccCCCCCCCcCccCCcccCcEEEEEeec-----CCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEeC-CeE
Confidence 233 69999999999987631 1223344 5555555666779999999999999998 899
Q ss_pred EEEEEEEeCCCCCccEEEeeeccceeecC-----CcceeEEEcCCCCcee--e--cCCccceeeec--------CCeeec
Q 036760 146 MLISRVRNTSTDGKPFSFTFAYHTYFSVS-----DISEVRVEGLETLDYL--D--NLQNKERFTEQ--------GDAITF 208 (315)
Q Consensus 146 ~i~~~v~N~n~~~~~~p~~~g~HpYF~~~-----~~~~~~i~gl~~~~~~--d--~l~~~~~~~~~--------~~~~~~ 208 (315)
+++++++|+ ++++|||++|+||||+++ ++.+.+|.. .+..|+ | .+|+++..... ...+.+
T Consensus 165 ~i~~~~~N~--~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~ 241 (341)
T 3os7_A 165 KQTTSVVNL--SSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA 241 (341)
T ss_dssp EEEEEEEEC--SSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT
T ss_pred EEEEEEEeC--CCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEecCcccCCCCccccCCCccchhhcCCcccC
Confidence 999999999 999999999999999997 345555553 233443 2 35555332111 122334
Q ss_pred CCCcceEEeCC----C----CeEEEEeCCCCcEEEEEeC-CCCcEEEeCCccchhccccCCCCCCCCceEEEceeee---
Q 036760 209 ESEVDKIYLST----P----TKIAILDHEKKRTFVIRKD-GLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV--- 276 (315)
Q Consensus 209 ~~~~D~~y~~~----~----~~~~l~d~~~~~~i~v~~~-~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~--- 276 (315)
..++|++|... . ..+.|.++.++++|+|.++ ++|+++||+|+. +++|||||||+.
T Consensus 242 ~~~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pD 308 (341)
T 3os7_A 242 SHPIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIIN 308 (341)
T ss_dssp SSCCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTT
T ss_pred CcchhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCC
Confidence 45799999743 2 3588999999999999984 799999999853 146999999972
Q ss_pred ----------cCceEeCCCCEEEEEEEEEEee
Q 036760 277 ----------EKPITLKPGEEWKGRLELSGVP 298 (315)
Q Consensus 277 ----------~~~~~L~PGe~~~~~~~i~~~~ 298 (315)
.+.++|+|||+++.+++|+++.
T Consensus 309 a~n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 309 SPNVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp GGGCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred ccCCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 1469999999999999999874
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-42 Score=319.25 Aligned_cols=261 Identities=18% Similarity=0.241 Sum_probs=199.3
Q ss_pred cCCCceEEEEecCCCcEEEEE-cCCeEEEEEEeC-CCeeEEEeCCCCCCCCCCCccccccEEccccCCCC----------
Q 036760 14 GNNGLDKVVLRESRGSSAEVY-LYGGHVTSWKND-HGEELLFVSSKATFKPPKAIRGGIPICFPQFASLG---------- 81 (315)
Q Consensus 14 ~~~~~~~~~L~n~~~~~a~I~-~~Ga~l~s~~~~-~g~evL~~~~~~~~~~~~~irgG~pilfP~~gr~~---------- 81 (315)
.++|+++++|+|+. ++|+|. .+||+|+||+.+ .|+++||.++........++++|+||||| +||+.
T Consensus 10 ~~~g~~~~~L~n~~-~~~~i~p~~GA~l~s~~~~~~g~~~l~~~~~~~~~~~~~~~~G~pv~~p-~nRi~~g~~~~~G~~ 87 (326)
T 3mwx_A 10 TYLGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRT 87 (326)
T ss_dssp EETTEEEEEEEESS-EEEEEETTTTTEEEEEEETTTTEECBCCCSSHHHHHHCTTSSSCCEEBS-CSEEETTEEEETTEE
T ss_pred EECCeEEEEEECCC-EEEEEchhcCCEEEEEEecCCCceEEccCcChhHhhcCccccCceEcCC-CCcccCCEEEECCEE
Confidence 38999999999994 999999 799999999984 47899998765322223567899999999 69983
Q ss_pred -CCC---------CceeeecCCcEEeccCCCCCCCCCCceEEEEEe--CCCcchhccCCcceEEEEEEEECCCCcEEEEE
Q 036760 82 -SLE---------SHGFARNRFWSIDTDPPAFPTNSSSKAYIDLIL--RPSEEDLKIWPHSFEFRLRVALTPGGDLMLIS 149 (315)
Q Consensus 82 -~~~---------~HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l--~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~ 149 (315)
+++ +|||+|++.|+|++... +++...++|++ .+.++++++|||+|+++++|+|.+ ++|++++
T Consensus 88 y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~-----~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~-~~L~i~~ 161 (326)
T 3mwx_A 88 YHFDINEKDKHNHLHGFLYHEKWNVVTTKQ-----TDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKE-NTLFKHA 161 (326)
T ss_dssp EECCCCBTTTTEEESBSCTTSCCEEEEEEE-----ESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEET-TEEEEEE
T ss_pred EEccCCCCCCCccccCCccCCceEEEEeec-----cCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEcC-CcEEEEE
Confidence 233 69999999999987631 12234455544 445556679999999999999997 8999999
Q ss_pred EEEeCCCCCccEEEeeeccceeecCCcceeEEEcCCCCcee--e--cCCccceeee------cCCeeecCCCcceEEeCC
Q 036760 150 RVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYL--D--NLQNKERFTE------QGDAITFESEVDKIYLST 219 (315)
Q Consensus 150 ~v~N~n~~~~~~p~~~g~HpYF~~~~~~~~~i~gl~~~~~~--d--~l~~~~~~~~------~~~~~~~~~~~D~~y~~~ 219 (315)
+++|+ ++++|||++|+||||+++ +.+.+|... +..++ | .+|+++.... ....+.+..++|++|...
T Consensus 162 ~~~N~--~~~~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~~~d~~~iptg~~~~~~~~~~~~~~~~~~~~~~D~~f~~~ 237 (326)
T 3mwx_A 162 TVMNK--GKEAFPWGIGYHTTFIFP-AESSLFSLT-ADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSS 237 (326)
T ss_dssp EEEEC--SSSCEEECCEECCCEECC-TTTEEEEES-EEEEEEECTTSCEEEEEEECTTHHHHHHCBCCTTCCCEEEEEES
T ss_pred EEEEC--CCCceeeEEeeccccCCC-CCCEEEEEE-CCcEEEeCCccCCCCccccCcchhhcccCcccCCccccceeeec
Confidence 99999 999999999999999998 555555432 22333 2 3455432211 012233456789999753
Q ss_pred ------CCeEEEEeCCCCcEEEEEe-CCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee-------------cCc
Q 036760 220 ------PTKIAILDHEKKRTFVIRK-DGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV-------------EKP 279 (315)
Q Consensus 220 ------~~~~~l~d~~~~~~i~v~~-~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~-------------~~~ 279 (315)
...+.|.++.++++|+|.. .++|+++||+|+. +++|||||||++ .+.
T Consensus 238 ~~~~~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~~~~~~~g~ 304 (326)
T 3mwx_A 238 YQKRGGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLDLPSSLTGL 304 (326)
T ss_dssp HHHHCSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCCSCHHHHCC
T ss_pred cccCCCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccCCCccccCC
Confidence 2478999999999999987 4799999999853 146999999982 246
Q ss_pred eEeCCCCEEEEEEEEEEeec
Q 036760 280 ITLKPGEEWKGRLELSGVPS 299 (315)
Q Consensus 280 ~~L~PGe~~~~~~~i~~~~~ 299 (315)
++|+|||+++.+++|+++..
T Consensus 305 ~~L~PGe~~~~~~~i~~~~~ 324 (326)
T 3mwx_A 305 QVLEPGEETTAKSSITIELN 324 (326)
T ss_dssp EEECTTCEEEEEEEEEEEEC
T ss_pred eEECCCCeEEEEEEEEEEec
Confidence 89999999999999999754
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=305.38 Aligned_cols=264 Identities=13% Similarity=0.180 Sum_probs=196.2
Q ss_pred cCCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEE-eCCCCCCCCCCCccccccEEccccCCCC-----------
Q 036760 14 GNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLF-VSSKATFKPPKAIRGGIPICFPQFASLG----------- 81 (315)
Q Consensus 14 ~~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~-~~~~~~~~~~~~irgG~pilfP~~gr~~----------- 81 (315)
+.+++..++|+|+++++|+|..+||+|+||+. .|+++|| .++.+.|...++++|+ +++||+||+.
T Consensus 6 ~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~-~g~~vl~~~~~~~~y~~~~~~~G~--~l~p~~nRi~~g~f~~~G~~y 82 (342)
T 1yga_A 6 GDNKYGVITIGDEKKFQATIAPLGATLVDLKV-NGQSVVQGYSNVQDYLTDGNMMGA--TVGRYANRIAKGVFSLDDGPH 82 (342)
T ss_dssp -CCTTCCEEEEETTTEEEEEETBTTEEEEEEE-TTEECBCCCSSGGGGTTCSSCTTC--EECSBCSEEGGGEEEETTEEE
T ss_pred CCceEEEEEEECCCCEEEEEECCCCEEEEEEE-CCeeEEecCCChHHhccCCCeEcc--EECCCCCceeCCEEEECCEEE
Confidence 35568899999975699999999999999998 4789876 5555666655666653 5679999984
Q ss_pred CC-------CCceee---ecCCcEEeccCCCCCCCCCCceEEEEEeCCC--cchhccCCcceEEEEEEEECC-CCcEEEE
Q 036760 82 SL-------ESHGFA---RNRFWSIDTDPPAFPTNSSSKAYIDLILRPS--EEDLKIWPHSFEFRLRVALTP-GGDLMLI 148 (315)
Q Consensus 82 ~~-------~~HGf~---r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~--~~~~~~~P~~f~~~~ty~L~~-~~~L~i~ 148 (315)
++ ++|||+ |++.|+++.... .+.+.+.|+|+|.+. +++++.|||+|+++++|+|.+ +++|+++
T Consensus 83 ~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~----~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~ 158 (342)
T 1yga_A 83 KLTVNNCGNTNHSSISSLNLKQYKASPVEN----PSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDME 158 (342)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEECCCEE----EETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEE
T ss_pred EcCCCCCCcccCCCccccCcceeeeEEeec----cCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEEE
Confidence 23 469999 589999975410 000345688888754 233344999999999999983 4799999
Q ss_pred EEEEeCCCCCccEEEeeeccceeecC------CcceeEEEcCCCCcee--e--c-CCccceeeecCCeeecCC-------
Q 036760 149 SRVRNTSTDGKPFSFTFAYHTYFSVS------DISEVRVEGLETLDYL--D--N-LQNKERFTEQGDAITFES------- 210 (315)
Q Consensus 149 ~~v~N~n~~~~~~p~~~g~HpYF~~~------~~~~~~i~gl~~~~~~--d--~-l~~~~~~~~~~~~~~~~~------- 210 (315)
|+++|+ ++++|||++|+||||+++ ++.+..|. +.+..|+ | . +|+++.....+..++|..
T Consensus 159 ~~~~N~--~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~ 235 (342)
T 1yga_A 159 YQAQLV--RGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHED 235 (342)
T ss_dssp EEEEEE--ESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSS
T ss_pred EEEEeC--CCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCcc
Confidence 999999 999999999999999998 24456666 4455665 3 2 555543333333444432
Q ss_pred --CcceEEeCCC----------------CeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCC--CceEE
Q 036760 211 --EVDKIYLSTP----------------TKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEY--KHMLC 270 (315)
Q Consensus 211 --~~D~~y~~~~----------------~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~--~~fvC 270 (315)
++|++|.... ..++|.++.+++.|+|.++ +|+++||||+.. ++.| +.|||
T Consensus 236 ~~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~vyt~~~~---------~~~y~~~~~vc 305 (342)
T 1yga_A 236 TPVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPTVHLYTGDNL---------CGKFVPRSGFA 305 (342)
T ss_dssp CCCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSEEEEECCTTC---------CTTSCTTSCBE
T ss_pred cCCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCEEEEECCCCc---------cccCCCCCEEE
Confidence 6999996532 3578889999999999998 999999998521 1222 68999
Q ss_pred Eceeee----c-----CceEeCCCCEEEEEEEEEEe
Q 036760 271 VEAAAV----E-----KPITLKPGEEWKGRLELSGV 297 (315)
Q Consensus 271 vEP~~~----~-----~~~~L~PGe~~~~~~~i~~~ 297 (315)
|||+.. + +.++|+|||+++.+++|+|.
T Consensus 306 lEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 306 VQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp EEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred EECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 999862 1 23899999999999999875
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=2.4e-38 Score=296.23 Aligned_cols=260 Identities=16% Similarity=0.271 Sum_probs=190.7
Q ss_pred CCceEEEEecCCCcEEEEEcCCeEEEEEEe--CCCe--eEEE-eCCCCCCCCCCCccccccEEccccCCCC---------
Q 036760 16 NGLDKVVLRESRGSSAEVYLYGGHVTSWKN--DHGE--ELLF-VSSKATFKPPKAIRGGIPICFPQFASLG--------- 81 (315)
Q Consensus 16 ~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~--~~g~--evL~-~~~~~~~~~~~~irgG~pilfP~~gr~~--------- 81 (315)
.++..++|+|+ +++|+|..+||+|+||+. ++|+ ++|| .++.+.|...++++| ++||||+||+.
T Consensus 19 ~~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G--~~l~p~~nRi~~g~f~~~G~ 95 (344)
T 1snz_A 19 GTVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFG--AVIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp EEEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTT--CEECSBCSEEGGGEEEETTE
T ss_pred cEEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCcee--eEecCcCCcccCCEEEECCE
Confidence 34889999999 799999999999999996 2354 8887 443344444455554 37999999984
Q ss_pred --CC-------CCceeee---cCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEE
Q 036760 82 --SL-------ESHGFAR---NRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLIS 149 (315)
Q Consensus 82 --~~-------~~HGf~r---~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~ 149 (315)
++ ++|||++ .+.|++++. + ..|+|+|.+.+ +.++|||+|+++++|+|++ ++|+|+|
T Consensus 96 ~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~---------~-~~v~l~l~~~~-~~~gyP~~~~~~vty~L~~-~~L~i~~ 163 (344)
T 1snz_A 96 EYHLAINKEPNSLHGGVRGFDKVLWTPRVL---------S-NGVQFSRISPD-GEEGYPGELKVWVTYTLDG-GELIVNY 163 (344)
T ss_dssp EEECCCTBTTBEETTSSSCGGGSBCEEEEE---------T-TEEEEEEEECT-TGGGCCSCEEEEEEEEEET-TEEEEEE
T ss_pred EEECCCCCCCcccCCCccccccceeeEEEe---------C-CEEEEEEECCC-cCCCCCEEEEEEEEEEEcC-CEEEEEE
Confidence 23 3999995 899999865 1 35888887654 6789999999999999998 6999999
Q ss_pred EEEeCCCCCccEEEeeeccceeecCC-----cceeEEEcCCCCcee--e--cCCccceeeecCCeeecCC----------
Q 036760 150 RVRNTSTDGKPFSFTFAYHTYFSVSD-----ISEVRVEGLETLDYL--D--NLQNKERFTEQGDAITFES---------- 210 (315)
Q Consensus 150 ~v~N~n~~~~~~p~~~g~HpYF~~~~-----~~~~~i~gl~~~~~~--d--~l~~~~~~~~~~~~~~~~~---------- 210 (315)
+++| +++|||++|+||||+++. +.+..|. +.+..|+ | .+|+++.....+..++|..
T Consensus 164 ~a~~----d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~ 238 (344)
T 1snz_A 164 RAQA----SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQD 238 (344)
T ss_dssp EEEE----SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHH
T ss_pred EEEe----CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhcc
Confidence 9875 689999999999999984 3444444 2334454 2 4566654333444455543
Q ss_pred ----CcceEEeCCC-----CeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCC--CceEEEceeee---
Q 036760 211 ----EVDKIYLSTP-----TKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEY--KHMLCVEAAAV--- 276 (315)
Q Consensus 211 ----~~D~~y~~~~-----~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~--~~fvCvEP~~~--- 276 (315)
++|++|.... ..++|.++.+++.|+|.++ +|.++||+|..... .+.+.....| +.|||||||..
T Consensus 239 ~~~~g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~-~~~~~~~~~y~~~~~vclEp~~~pda 316 (344)
T 1snz_A 239 FHLNGFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLDG-TLKGKNGAVYPKHSGFCLETQNWPDA 316 (344)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCEE-EEECGGGCEEETTSCBEEEEESCTTG
T ss_pred cccCCCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCCc-cccCCCCcccCCCCEEEEeCcCCCCc
Confidence 4899996421 2578999999999999998 99999999831110 0111111112 57999999963
Q ss_pred -c----CceEeCCCCEEEEEEEEEEe
Q 036760 277 -E----KPITLKPGEEWKGRLELSGV 297 (315)
Q Consensus 277 -~----~~~~L~PGe~~~~~~~i~~~ 297 (315)
+ +.++|+|||+++.+++|+|.
T Consensus 317 ~n~~~~~~~~L~pGe~~~~~~~~~f~ 342 (344)
T 1snz_A 317 VNQPRFPPVLLRPGEEYDHTTWFKFS 342 (344)
T ss_dssp GGCTTSCCCEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCeEECCCCEEEEEEEEEEE
Confidence 1 35899999999999999986
No 12
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=6.3e-37 Score=286.04 Aligned_cols=262 Identities=14% Similarity=0.195 Sum_probs=187.6
Q ss_pred CCceEEEEecCCCcEEEEEcCCeEEEEEEe--CCC--eeEEEeCCC-C-CCCCCCCccccccEEccccCCCC--------
Q 036760 16 NGLDKVVLRESRGSSAEVYLYGGHVTSWKN--DHG--EELLFVSSK-A-TFKPPKAIRGGIPICFPQFASLG-------- 81 (315)
Q Consensus 16 ~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~--~~g--~evL~~~~~-~-~~~~~~~irgG~pilfP~~gr~~-------- 81 (315)
..+..++|+++ +++|+|..+||+|+||+. ++| +++||..+. + ++. ..+++| ++++||+|||.
T Consensus 11 ~~~~~~~L~~~-~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~-~~~~~G--~~lgp~anRI~~g~f~~~G 86 (339)
T 1lur_A 11 ASGFIEIANKQ-GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEK-DAASIG--KTVGRVANRIKNSTLHFDG 86 (339)
T ss_dssp CCCCEEEECSS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHH-CSSCTT--CEECSBCSEEGGGEEEETT
T ss_pred ceeEEEEEeCC-CEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhcc-CCCccc--cEecCcCCeecCCEEEECC
Confidence 34678999655 799999999999999996 346 788876543 3 343 344444 57889999994
Q ss_pred ---CCC-------Cceee---ecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEE
Q 036760 82 ---SLE-------SHGFA---RNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLI 148 (315)
Q Consensus 82 ---~~~-------~HGf~---r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~ 148 (315)
+++ +||++ +.+.|++++.+ .++|+|++.+.+ +.++|||+|+++++|+|+++++|+|+
T Consensus 87 ~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~---------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~ 156 (339)
T 1lur_A 87 KQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA---------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLIIE 156 (339)
T ss_dssp EEEECCCSBTTBEETTCTTSGGGSBCEEEEEE---------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEEEE
T ss_pred EEEECCCCCCCcccCCCCcccccceeeEEEcc---------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEEEE
Confidence 344 99999 48999998653 346888888644 67899999999999999854899999
Q ss_pred EEEEeCCCCCccEEEeeeccceeecCC---cceeEEEcCCCCcee--e--cCCccceeeecCCee------ecCC-----
Q 036760 149 SRVRNTSTDGKPFSFTFAYHTYFSVSD---ISEVRVEGLETLDYL--D--NLQNKERFTEQGDAI------TFES----- 210 (315)
Q Consensus 149 ~~v~N~n~~~~~~p~~~g~HpYF~~~~---~~~~~i~gl~~~~~~--d--~l~~~~~~~~~~~~~------~~~~----- 210 (315)
|++ + ++++|||++|+||||+++. +.+..|. +.+..|+ | .+|+++.....+..+ .+..
T Consensus 157 ~~a--~--~d~~tp~~lg~HpYFnl~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~ 231 (339)
T 1lur_A 157 HHA--T--CDTPGLLALTNHAYWNLDGSDTVAEHFLE-MEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDA 231 (339)
T ss_dssp EEE--E--CSSCEECBCEECCEECSSCCSCSTTCEEE-ECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCS
T ss_pred EEE--e--CCCCeEEeeeccceEECCCCCcccCEEEE-EECCEEEEeCCCCccCCCEEccCCCcccccCceecCchhccc
Confidence 998 5 7899999999999999984 4444443 2333444 2 355554322222222 2222
Q ss_pred ----CcceEEeCC---C-----CeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee--
Q 036760 211 ----EVDKIYLST---P-----TKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV-- 276 (315)
Q Consensus 211 ----~~D~~y~~~---~-----~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~-- 276 (315)
++|++|... . ..++|.++.+++.|+|.++ +|.++||+|+.....+ .+-.+...+.|||||||+.
T Consensus 232 ~~~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~~g-~~g~~y~~~~~vclEp~~~pD 309 (339)
T 1lur_A 232 EELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLYASKFLDCKG-KKGEHYKANKALAIEPQFHSA 309 (339)
T ss_dssp SCCCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEECCTTCCEEC-GGGCEECTTCCEEEEEESCTT
T ss_pred ccCCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEECCCCccccC-CCCcccCCCCEEEEeccCCCC
Confidence 689999532 2 3588999999999999998 9999999985210000 0000001256999999983
Q ss_pred --c----CceEeCCCCEEEEEEEEEEee
Q 036760 277 --E----KPITLKPGEEWKGRLELSGVP 298 (315)
Q Consensus 277 --~----~~~~L~PGe~~~~~~~i~~~~ 298 (315)
+ +.++|+|||+++.+++|+|..
T Consensus 310 a~n~~~~~~~~L~pGe~~~~~~~~~f~~ 337 (339)
T 1lur_A 310 APNFDHFPDVSLRPGDHYCQEIVYTFSH 337 (339)
T ss_dssp GGGCTTSCCCEECTTCCEEEEEEEEEEE
T ss_pred ccCCCCCCCeEECCCCEEEEEEEEEEEE
Confidence 1 348999999999999999863
No 13
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=6.1e-37 Score=286.81 Aligned_cols=262 Identities=13% Similarity=0.237 Sum_probs=188.3
Q ss_pred CceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCCC-CCCCCCCCccccccEEccccCCCC-----------CCC
Q 036760 17 GLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSK-ATFKPPKAIRGGIPICFPQFASLG-----------SLE 84 (315)
Q Consensus 17 ~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~~-~~~~~~~~irgG~pilfP~~gr~~-----------~~~ 84 (315)
.+..++|+|+++++|+|..+||.|+||+. +|+++||..+. +.|....+.+| ++|+||+|||. +++
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~~-~G~~vvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y~L~ 87 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQK-DGKHLILGFDSAKEYLEKDAYPG--ATVGPTAGRIKDGLVKISGKDYILN 87 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEEE-TTEESBCCCSSHHHHHHTCSCTT--CEECSBCSEEGGGEEEETTEEEECC
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEEE-CCeEEEEeCCCHHHHhhCCCeEe--eEEcccCCcccCCEEEECCEEEEcc
Confidence 57899999986799999999999999995 68888775433 45533344444 79999999994 344
Q ss_pred -------Cceee---ecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEeC
Q 036760 85 -------SHGFA---RNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNT 154 (315)
Q Consensus 85 -------~HGf~---r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N~ 154 (315)
+||++ +.+.|+++..+ ++...+|+|++.+. ++.++|||+|+++++|+|+++++|+|+|+++
T Consensus 88 ~N~~~n~lHGg~~g~~~~~W~v~~~~------~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~-- 158 (347)
T 1nsx_A 88 QNEGPQTLHGGEESIHTKLWTYEVTD------LGAEVQVKFSLVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI-- 158 (347)
T ss_dssp CCBTTBEETTSTTCGGGSBCEEEEEE------CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--
T ss_pred CCCCCcccCCCCcccccceEEEEEcc------CCcceEEEEEEECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE--
Confidence 99998 89999998763 11123688999875 5789999999999999998558999999985
Q ss_pred CCCCccEEEeeeccceeecCC-----cceeEEEcCCCCcee--e--c-CCccceeeecCCeeecC---------------
Q 036760 155 STDGKPFSFTFAYHTYFSVSD-----ISEVRVEGLETLDYL--D--N-LQNKERFTEQGDAITFE--------------- 209 (315)
Q Consensus 155 n~~~~~~p~~~g~HpYF~~~~-----~~~~~i~gl~~~~~~--d--~-l~~~~~~~~~~~~~~~~--------------- 209 (315)
++++|||++|+|||||++. +.+..|.- ....++ | . +|+++.....+..++|.
T Consensus 159 --~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i-~a~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~ 235 (347)
T 1nsx_A 159 --SDKDTVFNPTGNVYFNLNGDASESVENHGLRL-AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQ 235 (347)
T ss_dssp --ESSCEECBCEECCEECTTSSTTSCGGGSEEEE-CEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHH
T ss_pred --cCCCeEEeeeccceEecCCCCCCceeceEEEE-ECCeEEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhh
Confidence 6899999999999999974 23433331 122333 3 3 66665333323223332
Q ss_pred ----CCcceEEeCC-----CCeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchh---ccccCCCCCCCCceEEEceeee-
Q 036760 210 ----SEVDKIYLST-----PTKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKA---KAMADFGDDEYKHMLCVEAAAV- 276 (315)
Q Consensus 210 ----~~~D~~y~~~-----~~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~---~~~~d~~~~~~~~fvCvEP~~~- 276 (315)
.++|++|.-. ...++|.+ +++.|+|.++ +|.++||++..-.. +.-+.+ ..+.+||||||+.
T Consensus 236 ~~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~~~~g~~~~g~~~---~~~~~vclEpq~~p 309 (347)
T 1nsx_A 236 VQLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANFGDLGTLYHEKKQ---VHHGGITFECQVSP 309 (347)
T ss_dssp HHHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCCTTCCCEETTEEC---CTTCCEECEEESCT
T ss_pred hcccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCCCccccccCCccc---CCcCEEEEeccCCC
Confidence 1589999532 13577877 7899999998 99999999742100 000011 1246799999983
Q ss_pred ---c----CceEeCCCCEEEEEEEEEEeec
Q 036760 277 ---E----KPITLKPGEEWKGRLELSGVPS 299 (315)
Q Consensus 277 ---~----~~~~L~PGe~~~~~~~i~~~~~ 299 (315)
+ +.++|+|||+++.+++|+|...
T Consensus 310 Da~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 339 (347)
T 1nsx_A 310 GSEQIPELGDISLKAGEKYQATTIYSLHTK 339 (347)
T ss_dssp TTTTCGGGCCCEECTTCEEEEEEEEEEEEC
T ss_pred CccCCCCCCCeEECCCCEEEEEEEEEEEec
Confidence 1 3589999999999999998643
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.2e-35 Score=274.29 Aligned_cols=265 Identities=19% Similarity=0.290 Sum_probs=190.0
Q ss_pred CCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCC-CCCCCCCCCccccccEEccccCCCC-----------C
Q 036760 15 NNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSS-KATFKPPKAIRGGIPICFPQFASLG-----------S 82 (315)
Q Consensus 15 ~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~-~~~~~~~~~irgG~pilfP~~gr~~-----------~ 82 (315)
-..+..++|+|+++++|+|..+||.|+||+.+ ++++++..+ .+.|....+..| ++|+||+|||. +
T Consensus 15 g~~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~-~~dvvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y~ 91 (338)
T 3imh_A 15 NKDLCEITLENDAGMAVKVLNYGATLEKVLLD-GENMILSLNSPEDYSKERNFLG--GTVGRIAGRVRAGQWKHGNEIHQ 91 (338)
T ss_dssp TEEEEEEEEECSSSEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGGTSCCCTT--CEECSBCSEEGGGEEEETTEEEE
T ss_pred CeEEEEEEEECCCcEEEEEecCCcEEEEEEEC-CEEEEecCCChHHhccCCCeEe--eEEEeeCCEecCCEEEECCEEEE
Confidence 33478899999877999999999999999984 589887543 244433334333 58999999984 3
Q ss_pred C-------CCceee--ecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEe
Q 036760 83 L-------ESHGFA--RNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRN 153 (315)
Q Consensus 83 ~-------~~HGf~--r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N 153 (315)
+ .+||++ +.+.|++.... +.+.++|+|++.+. ++.++|||+|+++++|+|+++++|+|+++++
T Consensus 92 L~~N~g~n~LHGg~g~~~~~W~v~~~~------~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~- 163 (338)
T 3imh_A 92 LPLNDGDNHIHGGIGTDMHVWDFRPSC------DSEHARVDLTLFDP-DGNNDYPGNLKLHARYELDNENNLHYLLEAV- 163 (338)
T ss_dssp CCCCBTTBEETTSSCGGGSBCEEEEEE------CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE-
T ss_pred CCCCCCCcCCCCCCCcCCceEEEEeee------ecCCCEEEEEEECC-ccccCCCeEEEEEEEEEEecCCeEEEEEEEe-
Confidence 3 359998 78999995321 12467899999864 4678999999999999999757899999985
Q ss_pred CCCCCccEEEeeeccceeecCC-cceeEEEcCCCCcee--e--cCCccceeeecCCeeecC-------------------
Q 036760 154 TSTDGKPFSFTFAYHTYFSVSD-ISEVRVEGLETLDYL--D--NLQNKERFTEQGDAITFE------------------- 209 (315)
Q Consensus 154 ~n~~~~~~p~~~g~HpYF~~~~-~~~~~i~gl~~~~~~--d--~l~~~~~~~~~~~~~~~~------------------- 209 (315)
++++|||++|+|||||++. +.+..|. +.+..|+ | .+|+++.....+.+++|.
T Consensus 164 ---~d~~tp~nlg~HpYFnL~g~i~~~~L~-i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~ 239 (338)
T 3imh_A 164 ---SDKLTIFNPVNHTYFNLGERAEDLNLQ-MNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLR 239 (338)
T ss_dssp ---ESSSEECBCEECCEECTTSCGGGCEEE-ECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHH
T ss_pred ---cCCCeEEEEeeCCEEeCCCCcCCeEEE-EEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhccc
Confidence 6899999999999999984 4443333 1223343 2 467766443334444442
Q ss_pred CCcceEEeCCC--CeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee--c----CceE
Q 036760 210 SEVDKIYLSTP--TKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV--E----KPIT 281 (315)
Q Consensus 210 ~~~D~~y~~~~--~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~--~----~~~~ 281 (315)
.++|++|.... ..++|.+ +|+.|+|.++ .|.++||++...... +.-.....+..||||||+. + ..++
T Consensus 240 ~g~Dh~f~l~~~~~~a~l~~--sg~~l~v~t~-~p~~q~YTgn~l~~~--g~g~~~~~~~g~clE~q~~P~n~~~f~~~v 314 (338)
T 3imh_A 240 NGLDHPFILNGNNPAALLSS--NKHRLIVKTN-APALVLYAGNHFNHT--GIVNNIGQYDGITFEAQCPPAEGNDLGQIT 314 (338)
T ss_dssp TSCEEEEEECSCSCSEEEEC--SSEEEEEEES-SSEEEEECCTTCCSB--TTBTTCCTTSCEECEEESCCCSSSCCGGGE
T ss_pred CCCCCceeecCCceEEEEEC--CCeEEEEEeC-CCEEEEeCCCCcCCC--CCCcccCccCEEEEEccCCCCCCCCCCCeE
Confidence 25899996421 2566754 7899999987 899999998432111 0000111246899999974 2 2389
Q ss_pred eCCCCEEEEEEEEEEeec
Q 036760 282 LKPGEEWKGRLELSGVPS 299 (315)
Q Consensus 282 L~PGe~~~~~~~i~~~~~ 299 (315)
|+|||+++.++.++|+.-
T Consensus 315 L~pGe~y~~~t~y~f~~~ 332 (338)
T 3imh_A 315 LLPFEKFKRTVDWKFEEG 332 (338)
T ss_dssp ECTTCCEEEEEEEEEEEC
T ss_pred ECCCCEEEEEEEEEECCc
Confidence 999999999999999864
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=4.1e-34 Score=290.51 Aligned_cols=264 Identities=12% Similarity=0.145 Sum_probs=191.3
Q ss_pred CCCceEEEEecCCCcEEEEEcCCeEEEEEEeCCCeeEEEeCCC--CCCCCCCCccccccEEccccCCCC-----------
Q 036760 15 NNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSK--ATFKPPKAIRGGIPICFPQFASLG----------- 81 (315)
Q Consensus 15 ~~~~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~~g~evL~~~~~--~~~~~~~~irgG~pilfP~~gr~~----------- 81 (315)
......++|+|+++++|+|..+||+|+||+. +|+++||..+. .+|....+. .| ++++||+|||.
T Consensus 370 ~~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~-~g~~~v~~~~~~~~y~~~~~~~-~g-~~l~~~~nRi~~g~f~~~G~~y 446 (699)
T 1z45_A 370 RYDARFVTIGAGTRFQATFANLGASIVDLKV-NGQSVVLGYENEEGYLNPDSAY-IG-ATIGRYANRISKGKFSLCNKDY 446 (699)
T ss_dssp CTTSEEEEESTTSSEEEEEESBTTCEEEEEE-TTEECBCCCSSHHHHTCTTCCC-TT-CEECSBCSEEGGGEEEETTEEE
T ss_pred CcceEEEEEECCCceEEEEEccCeEEEEEee-cCceEEECCCCHHHHhhcCCCc-cc-cccCcccCeecCcEEEECCEEE
Confidence 4557899999985699999999999999998 58898875432 345323343 33 67899999994
Q ss_pred CCC-------Cceeee---cCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEEC-CCCcEEEEEE
Q 036760 82 SLE-------SHGFAR---NRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALT-PGGDLMLISR 150 (315)
Q Consensus 82 ~~~-------~HGf~r---~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~-~~~~L~i~~~ 150 (315)
+++ +||+++ .+.|++..... .+++..+++|++.+.+. +++|||+|+++++|+|+ ++++|+++|+
T Consensus 447 ~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~----~~~~~~~~~~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~~ 521 (699)
T 1z45_A 447 QLTVNNGVNANHSSIGSFHRKRFLGPIIQN----PSKDVFTAEYMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVYK 521 (699)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEEEEEEE----EETTEEEEEEEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEEE
T ss_pred EccCCCCCcccCCCccccceeecceeeecc----CCCCcceEEEEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEEE
Confidence 334 599994 89999842210 00122478999987654 89999999999999998 3399999999
Q ss_pred EEeCCCCCccEEEeeeccceeecCC-----cceeEEEcCCCCcee--e--cCCccceeeecCCeeecC---------CCc
Q 036760 151 VRNTSTDGKPFSFTFAYHTYFSVSD-----ISEVRVEGLETLDYL--D--NLQNKERFTEQGDAITFE---------SEV 212 (315)
Q Consensus 151 v~N~n~~~~~~p~~~g~HpYF~~~~-----~~~~~i~gl~~~~~~--d--~l~~~~~~~~~~~~~~~~---------~~~ 212 (315)
++|+ ++++|||++|+|||||++. +.+..+. +....|+ | .+|+++.....+..++|. .++
T Consensus 522 ~~n~--~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~ 598 (699)
T 1z45_A 522 GKLT--AGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQF 598 (699)
T ss_dssp EEEE--ESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCC
T ss_pred EEec--CCCCceecccccceEeecCCCCCCccccEEE-EecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccCCCC
Confidence 9999 9999999999999999983 3444553 2344554 2 355555333333333331 268
Q ss_pred ceEEeCCC---------------CeEEEEeCCCCcEEEEEeCCCCcEEEeCCccchhccccCCCCCCCCceEEEceeee-
Q 036760 213 DKIYLSTP---------------TKIAILDHEKKRTFVIRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAV- 276 (315)
Q Consensus 213 D~~y~~~~---------------~~~~l~d~~~~~~i~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fvCvEP~~~- 276 (315)
|++|.... ..++|.++.+++.|+|.++ +|.++||++.... + ....+.|||||||..
T Consensus 599 D~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~~~-----~--~~~~~~~~clEp~~~p 670 (699)
T 1z45_A 599 DCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDFLS-----A--GYEARQGFAIEPGRYI 670 (699)
T ss_dssp EEEEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCC-----T--TCCTTSCEEEEEESCS
T ss_pred CcceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCCCC-----C--CCCCCCEEEEecCCCC
Confidence 99996431 2378899999999999998 9999999973210 0 011157899999962
Q ss_pred ---c-----CceEeCCCCEEEEEEEEEEe
Q 036760 277 ---E-----KPITLKPGEEWKGRLELSGV 297 (315)
Q Consensus 277 ---~-----~~~~L~PGe~~~~~~~i~~~ 297 (315)
+ +.++|+|||+++.++.|+|.
T Consensus 671 da~n~~~~~~~~~L~pge~~~~~~~~~f~ 699 (699)
T 1z45_A 671 DAINQENWKDCVTLKNGETYGSKIVYRFS 699 (699)
T ss_dssp SGGGCTTTGGGGEEETTCEEEEEEEEEEC
T ss_pred CccCcccCCCCcEECCCCEEEEEEEEEEC
Confidence 1 34899999999999999873
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=2.9e-23 Score=196.22 Aligned_cols=262 Identities=15% Similarity=0.147 Sum_probs=167.4
Q ss_pred CCCceEEEEecCCCcEEEEE-cCCeEEEEEEeCCCeeEEEeCCCCCCCCCCCc----cccccEE------cc-----ccC
Q 036760 15 NNGLDKVVLRESRGSSAEVY-LYGGHVTSWKNDHGEELLFVSSKATFKPPKAI----RGGIPIC------FP-----QFA 78 (315)
Q Consensus 15 ~~~~~~~~L~n~~~~~a~I~-~~Ga~l~s~~~~~g~evL~~~~~~~~~~~~~i----rgG~pil------fP-----~~g 78 (315)
..|++.++|+|+.+++++|. ..|+.|.+++. +|+++.|.++...+.....+ ++|..++ ++ +.|
T Consensus 45 ~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~-~g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~f~g~~~~cGl~~~G 123 (384)
T 3ty1_A 45 QEGSKILTIHSKDGLTITLSPTRGMNLLRIEG-FGSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYEWTG 123 (384)
T ss_dssp GTTCEEEEEEESSSCEEEEEGGGTTEEEEEEE-TTEEECCCCSCCSCCCGGGCCTTHHHHTGGGGTCCCSEEEEEESCCS
T ss_pred ccCeEEEEEECCCccEEEEecccCCcceeEEE-CCEEeeecCCcccCcCccccccccCCCCchhhcCCeeEeeccCcccC
Confidence 56899999999977999997 69999999998 68999998873333222111 2333322 22 222
Q ss_pred CCC-----CCCCceeeecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECCCCcEEEEEEEEe
Q 036760 79 SLG-----SLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRN 153 (315)
Q Consensus 79 r~~-----~~~~HGf~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~~~L~i~~~v~N 153 (315)
.-. ..++||++++.+|+.+.... ++++...++++....+....+|||.++.+++|+|.+ ++|+|+++|+|
T Consensus 124 ~P~~~~G~~~~LHG~~~~~pa~~~~~~~----~~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~-~~l~i~~~VtN 198 (384)
T 3ty1_A 124 HPVTADGQIYTLHGKAGNTPASLVEVEV----ADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGS-NSFSLHDVLTN 198 (384)
T ss_dssp SCEEETTEEECTTCSGGGSCCSEEEEEE----ESSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTC-SEEEEEEEEEE
T ss_pred CCCCcCCccccccccccCCCcceeEEEe----cCCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCC-CEEEEEEEEEE
Confidence 211 36899999999944321100 011234455554444445678999999999999997 99999999999
Q ss_pred CCCCCccEEEeeeccceeecCCc-ceeEEEcCCCCceee--cCCccc--eeeecCCeeecCCCcceEE-eC----CCC--
Q 036760 154 TSTDGKPFSFTFAYHTYFSVSDI-SEVRVEGLETLDYLD--NLQNKE--RFTEQGDAITFESEVDKIY-LS----TPT-- 221 (315)
Q Consensus 154 ~n~~~~~~p~~~g~HpYF~~~~~-~~~~i~gl~~~~~~d--~l~~~~--~~~~~~~~~~~~~~~D~~y-~~----~~~-- 221 (315)
+ ++++|||++++||||..+-. ++.++.. +....++ ..+... .+.....+. ..--+.+| .+ ..+
T Consensus 199 ~--g~~p~P~~~~~H~nfg~Pll~~g~rl~~-p~~~~~p~~~~~~~~l~~~~~~~~p~--~~~~E~vf~~d~~~d~~G~~ 273 (384)
T 3ty1_A 199 H--ADYPHDYQIIYHSNFGTPILEEGARFLA-PISSISPFNDYAKSGLKTWQTYQGPT--KDFDEMVFNIQPLADENHQT 273 (384)
T ss_dssp C--SSSCEEEEEEEEEEECTTTCCTTCEEEC-CEEEEEESSGGGGGGSTTTTBCCCCC--TTCCCEEEEEEECCCTTSEE
T ss_pred C--CCCCCchheecccccCCCccCCCcEEEe-ccceeccccccccccccchhhccCCC--CCCCceEEEEeccccCCCce
Confidence 9 99999999999999987632 2344431 1111121 000000 000000000 01113454 21 233
Q ss_pred eEEEEeCCCCcEEEEEe--CCCCcEEEeCCccchhccccCCCCCCCCceE-EEceeee-----------cCceEeCCCCE
Q 036760 222 KIAILDHEKKRTFVIRK--DGLPDAVVWNPWDKKAKAMADFGDDEYKHML-CVEAAAV-----------EKPITLKPGEE 287 (315)
Q Consensus 222 ~~~l~d~~~~~~i~v~~--~~~~~~vvw~p~~~~~~~~~d~~~~~~~~fv-CvEP~~~-----------~~~~~L~PGe~ 287 (315)
.+.|.++..+..+.+.. +.||++++|+..... + ..|+ |||||+. ..++.|+|||+
T Consensus 274 ~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~~----------~-~gyvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes 342 (384)
T 3ty1_A 274 LAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDTV----------K-QGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGAS 342 (384)
T ss_dssp EEEEECSSSSCEEEEEEETTTSCEEEEEEEESCT----------T-TCEEEEEEEESSCSSCHHHHHHTTCCEEECTTCE
T ss_pred EEEEEecCCCcEEEEEEchHHCCHhHhhcccCCC----------C-CccEEEEeCccCCCchhHHHHhCCCeEEECCCCE
Confidence 37788888888888865 569999999862110 1 1265 9999984 25799999999
Q ss_pred EEEEEEEEEee
Q 036760 288 WKGRLELSGVP 298 (315)
Q Consensus 288 ~~~~~~i~~~~ 298 (315)
++.+++|.+..
T Consensus 343 ~~~~~~i~v~~ 353 (384)
T 3ty1_A 343 AQFDLTYTLLH 353 (384)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEec
Confidence 99999998853
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=93.71 E-value=0.98 Score=39.94 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=67.8
Q ss_pred eEEEEecCCCcEEEEEcCCeEEEEEEeC-------CCeeE-EEeCCCCCCCCCCCccccccEEccccCCCC-CCCCceee
Q 036760 19 DKVVLRESRGSSAEVYLYGGHVTSWKND-------HGEEL-LFVSSKATFKPPKAIRGGIPICFPQFASLG-SLESHGFA 89 (315)
Q Consensus 19 ~~~~L~n~~~~~a~I~~~Ga~l~s~~~~-------~g~ev-L~~~~~~~~~~~~~irgG~pilfP~~gr~~-~~~~HGf~ 89 (315)
..|+|+++. ++++|...||.|.++..+ ++.++ |..+... ..-+.-+-|.+..+ ..+.|.-
T Consensus 4 ~~i~v~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~---------~~y~a~~gl~~~~g~~~~~~~~- 72 (280)
T 3bs6_A 4 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQ---------FIYQAQSGLTGRDGPDNPANGP- 72 (280)
T ss_dssp CEEEEECSS-CEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEETT---------EEEEEEEEEESTTCTTSGGGSS-
T ss_pred CEEEEECCc-EEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCCC---------CeeEEEEeeeccCCCCCCCCCC-
Confidence 468999995 999999999999998751 12232 2221111 00122223444322 2233321
Q ss_pred ecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECC-CCcEEEEEEEEeCCCCCccEEEe
Q 036760 90 RNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTP-GGDLMLISRVRNTSTDGKPFSFT 164 (315)
Q Consensus 90 r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~-~~~L~i~~~v~N~n~~~~~~p~~ 164 (315)
| ..|++.... ..-+..++...|+|++... -...++.+|+|.. +-.+.++++|.|. +.+++.+.
T Consensus 73 ~-~~f~~~~~~-~~l~~~~~~~~Vtlt~~~~--------~G~~~~ktytf~~~~Y~i~v~~~v~N~--s~~~~~~~ 136 (280)
T 3bs6_A 73 R-PLYNVEKDA-YVLAEGQNELQVPMTYTDA--------AGNTFTKTFVLKRGDYAVNVNYNVQNA--GEKPLEIS 136 (280)
T ss_dssp C-CBCBCSCSE-EECCTTCSEEEEEEEEECT--------TCCEEEEEEEEETTCCEEEEEEEEECC--SSSCEEEE
T ss_pred c-eeEEecCCc-eeccCCCceeEEEEEEECC--------CCeEEEEEEEEcCCceEEEEEEEEEcC--CCCceeEe
Confidence 2 567754210 0000112235677776531 1367999999974 4568888888888 77655443
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=92.11 E-value=1.9 Score=39.02 Aligned_cols=123 Identities=12% Similarity=0.114 Sum_probs=65.8
Q ss_pred ceEEEEecCCCcEEEEEcCCeEEEEEEeC-------CCeeE-EEeCCCCCCCCCCCccccccEEccccCCCC-CCCCcee
Q 036760 18 LDKVVLRESRGSSAEVYLYGGHVTSWKND-------HGEEL-LFVSSKATFKPPKAIRGGIPICFPQFASLG-SLESHGF 88 (315)
Q Consensus 18 ~~~~~L~n~~~~~a~I~~~Ga~l~s~~~~-------~g~ev-L~~~~~~~~~~~~~irgG~pilfP~~gr~~-~~~~HGf 88 (315)
-..|+|+++. ++++|...||.|.++..+ ++.++ |..+.... .-+.-+-|.+..+ ..+.|+-
T Consensus 34 ~~~i~V~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~~~---------~y~a~~gl~~~~g~~~~~~~~ 103 (330)
T 3blc_A 34 GKLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQF---------IYQAQSGLTGRDGPDNPANGP 103 (330)
T ss_dssp CCEEEEECSS-CEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECSSC---------EEEEEEEEESTTCTTSGGGCS
T ss_pred CCEEEEECCc-EEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCCCc---------eeEeeeeeeccCCCCCCCCCC
Confidence 4679999995 999999999999998751 11232 22221110 0011111333321 1223321
Q ss_pred eecCCcEEeccCCCCCCCCCCceEEEEEeCCCcchhccCCcceEEEEEEEECC-CCcEEEEEEEEeCCCCCccEEE
Q 036760 89 ARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTP-GGDLMLISRVRNTSTDGKPFSF 163 (315)
Q Consensus 89 ~r~~~W~v~~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~-~~~L~i~~~v~N~n~~~~~~p~ 163 (315)
+ ..|++.... ..-++.++...|+|+..... ...++.+|+|.. +-.+.++++|.|. +..++..
T Consensus 104 -~-~~f~~~~~~-~~L~~~~~~~~v~lt~~~~~--------G~~v~k~ytf~~~~Y~i~v~~~v~N~--s~~~~~~ 166 (330)
T 3blc_A 104 -R-PLYNVEKDA-YVLAEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNA--GEKPLEI 166 (330)
T ss_dssp -C-CBCBCSCSE-EECCTTCCEEEEEEEEECTT--------SCEEEEEEEEETTCCEEEEEEEEECC--SSSCEEE
T ss_pred -c-ceeEecCCc-eeccCCCceEEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcC--CCCccee
Confidence 2 347643211 00001122356666664211 267999999974 3467777888888 7666543
No 19
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=63.15 E-value=18 Score=27.56 Aligned_cols=33 Identities=12% Similarity=0.337 Sum_probs=26.4
Q ss_pred ceEEEEEEEECCCCcEEEEEEEEeCCCCCccEEEee
Q 036760 130 SFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTF 165 (315)
Q Consensus 130 ~f~~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~ 165 (315)
.+.+++++.-.+ +.+.+.++|+|. ++++..+.+
T Consensus 6 ~l~~~v~~~~~g-~~v~~~ltv~N~--s~~~v~l~f 38 (120)
T 3isy_A 6 EVVLSIDAIQEP-EQIKFNMSLKNQ--SERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEECS-SCEEEEEEEEEC--SSSCEEEEE
T ss_pred EEEEEEeeccCC-CeEEEEEEEEcC--CCCcEEEEe
Confidence 466777777776 899999999999 888877653
No 20
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=60.53 E-value=9.5 Score=28.02 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=22.4
Q ss_pred EEECCCCcEEEEEEEEeCCCCCccEEEeeeccceee
Q 036760 137 VALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFS 172 (315)
Q Consensus 137 y~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~HpYF~ 172 (315)
+.|.. ..=+++++|+|+ ||.|.. .|-|-.|.
T Consensus 13 I~lN~-gr~~~~l~V~Nt--GDRPIQ--VGSHyHF~ 43 (101)
T 4ep8_B 13 IALNT-GRATCRVVVENH--GDRPIQ--VGSHYHFA 43 (101)
T ss_dssp EECST-TCCEEEEEEEEC--SSSCEE--EETTSCGG
T ss_pred EEEcC-CCCEEEEEEEeC--CCcceE--EccccChh
Confidence 46666 667889999999 988766 55665553
No 21
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=54.20 E-value=1.7e+02 Score=28.83 Aligned_cols=37 Identities=14% Similarity=0.281 Sum_probs=28.3
Q ss_pred cCCCceEEEEecCCCcEEEEEc-CCeEEEEEEeC-CCeeE
Q 036760 14 GNNGLDKVVLRESRGSSAEVYL-YGGHVTSWKND-HGEEL 51 (315)
Q Consensus 14 ~~~~~~~~~L~n~~~~~a~I~~-~Ga~l~s~~~~-~g~ev 51 (315)
+..|...+.+++++ +.+.+.. .||.|.++... ...++
T Consensus 394 d~dg~~e~l~~~~~-~n~~~~~~~Gg~i~e~~~~~~~~n~ 432 (659)
T 1k1x_A 394 DFDGRAEIMVENDG-FIATIKPHYGGSIFELSSKRKAVNY 432 (659)
T ss_dssp SSSSSCEEEEECSS-EEEEEETTTTTEEEEEEETTTTEET
T ss_pred CCCCceeeeeeCCc-eEEEEccCCCCEEEEEeccchhccH
Confidence 35788899999995 8888884 59999999873 23443
No 22
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=50.73 E-value=14 Score=28.24 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=22.4
Q ss_pred EEECCCCcEEEEEEEEeCCCCCccEEEeeecccee
Q 036760 137 VALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYF 171 (315)
Q Consensus 137 y~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~HpYF 171 (315)
+.|.. ..=+++++|+|+ ||.|.. .|-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~Nt--GDRPIQ--VGSHyHF 48 (126)
T 4ubp_B 19 IEINA-GREKTTIRVSNT--GDRPIQ--VGSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEEC--SSSCEE--EETTSCG
T ss_pred EEeCC-CCcEEEEEEEeC--CCCCEE--Eccccch
Confidence 56776 677889999999 988766 5566555
No 23
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=50.73 E-value=14 Score=28.24 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=22.4
Q ss_pred EEECCCCcEEEEEEEEeCCCCCccEEEeeecccee
Q 036760 137 VALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYF 171 (315)
Q Consensus 137 y~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~HpYF 171 (315)
+.|.. ..=+++++|+|+ ||.|.. .|-|-.|
T Consensus 19 I~lN~-gr~~~~l~V~Nt--GDRPIQ--VGSHyHF 48 (126)
T 4ac7_B 19 IEINA-GREKTTIRVSNT--GDRPIQ--VGSHIHF 48 (126)
T ss_dssp EETTT-TSCEEEEEEEEC--SSSCEE--EETTSCG
T ss_pred EEeCC-CCcEEEEEEEeC--CCCCEE--Eccccch
Confidence 56776 677889999999 988766 5566555
No 24
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=35.90 E-value=36 Score=22.77 Aligned_cols=19 Identities=21% Similarity=0.188 Sum_probs=14.5
Q ss_pred eEEEEEEEECCCCcEEEEEE
Q 036760 131 FEFRLRVALTPGGDLMLISR 150 (315)
Q Consensus 131 f~~~~ty~L~~~~~L~i~~~ 150 (315)
|.-+++|+|++ +.|.|.++
T Consensus 29 fagtvtytldg-ndleirit 47 (85)
T 2kl8_A 29 FAGTVTYTLDG-NDLEIRIT 47 (85)
T ss_dssp TTCEEEEEECS-SCEEEEEE
T ss_pred hcceEEEEecC-CeeEEEEe
Confidence 34579999998 88887654
No 25
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=31.86 E-value=54 Score=29.83 Aligned_cols=29 Identities=7% Similarity=0.088 Sum_probs=24.6
Q ss_pred EEEEEEECCCCcEEEEEEEEeCCCCCccEEEe
Q 036760 133 FRLRVALTPGGDLMLISRVRNTSTDGKPFSFT 164 (315)
Q Consensus 133 ~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~ 164 (315)
...+|++-+ .+|+++++|+|. +++|..++
T Consensus 255 ~~A~Y~vpg-R~l~~~~~VtN~--g~~pvrlg 283 (382)
T 1yew_A 255 EDATYRVPG-RAMRMKLTITNH--GNSPIRLG 283 (382)
T ss_dssp EEEEEESSC-SEEEEEEEEEEC--SSSCEEEE
T ss_pred eccEEecCC-cEEEEEEEEEcC--CCCceEee
Confidence 356899887 999999999999 99987654
No 26
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=28.21 E-value=57 Score=30.05 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=24.3
Q ss_pred EEEEEEECCCCcEEEEEEEEeCCCCCccEEEe
Q 036760 133 FRLRVALTPGGDLMLISRVRNTSTDGKPFSFT 164 (315)
Q Consensus 133 ~~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~ 164 (315)
...+|++-. .+|+++++|+|. +++|..++
T Consensus 289 ~~A~Y~vpg-R~l~~~~~VtN~--g~~pvrlg 317 (419)
T 3rfr_A 289 NGGVYKVPG-RELTINVKVKNG--TSQPVRLG 317 (419)
T ss_dssp EEEEEESSS-SEEEEEEEEECC--SSSCBEEE
T ss_pred eceEEecCC-cEEEEEEEEecC--CCCceEEe
Confidence 356899887 999999999999 99987544
No 27
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=28.07 E-value=35 Score=28.71 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=26.0
Q ss_pred cCCcceEE--EEEEEECCCCcEEEEEEEEeCCCCCccEEEeeecccee
Q 036760 126 IWPHSFEF--RLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYF 171 (315)
Q Consensus 126 ~~P~~f~~--~~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~HpYF 171 (315)
.-|+.+.+ .-.+.|.. ..=.++++|+|+ ||.|.. .|.|-.|
T Consensus 105 ~~PGei~~~~~g~I~lN~-gr~~~~l~V~Nt--GDRPIQ--VGSHyHF 147 (225)
T 3qga_A 105 FKAGEIKFASDKDIELNA-GKEITELKVTNK--GPKSLH--VGSHFHF 147 (225)
T ss_dssp CCTTCEECSCSCCEETTT-TCCCEEEEEEEC--SSSCEE--EETTSCG
T ss_pred CCCCeEeccCCCceecCC-CCceEEEEEEEC--CCCcee--eccccch
Confidence 34665511 12356666 667788999999 988766 5556555
No 28
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=24.48 E-value=36 Score=28.92 Aligned_cols=41 Identities=17% Similarity=0.389 Sum_probs=26.3
Q ss_pred cCCcceEEE-EEEEECCCCcEEEEEEEEeCCCCCccEEEeeecccee
Q 036760 126 IWPHSFEFR-LRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYF 171 (315)
Q Consensus 126 ~~P~~f~~~-~ty~L~~~~~L~i~~~v~N~n~~~~~~p~~~g~HpYF 171 (315)
.-|+.+.+. -.+.|.. ..=.+++.|+|+ ||.|.. .|.|-.|
T Consensus 106 miPGei~~~~g~I~lN~-gr~~~~l~V~Nt--GDRPIQ--VGSHyHF 147 (238)
T 1e9y_A 106 LVPGELFLKNEDITINE-GKKAVSVKVKNV--GDRPVQ--IGSHFHF 147 (238)
T ss_dssp CCTTCEECCSCEEETTT-TCCCCEEEEEEC--SSSCEE--EETTSCG
T ss_pred CCCCeEEcCCCCeeeCC-CCCeEEEEEEeC--CCCceE--eccccch
Confidence 346654331 2356776 566788999999 988766 5555555
No 29
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=23.60 E-value=3.5e+02 Score=26.88 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=42.7
Q ss_pred ceEEEEEeCCCcchhccCCcceEEEEEEEECCC-CcEEEEEEEEeCCCCCccEEEeeeccceeecCCcc-e-eEEEcCC
Q 036760 110 KAYIDLILRPSEEDLKIWPHSFEFRLRVALTPG-GDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDIS-E-VRVEGLE 185 (315)
Q Consensus 110 ~~~v~l~l~~~~~~~~~~P~~f~~~~ty~L~~~-~~L~i~~~v~N~n~~~~~~p~~~g~HpYF~~~~~~-~-~~i~gl~ 185 (315)
..++++.|.+.. ..+++++.|++-++ +-++...+|+|+ +++++.+.-..-.-+.++... + +.+.|-+
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~--g~~~v~l~~~~s~~l~~~~~~~~~~~~~g~w 199 (729)
T 4fnq_A 130 AETLEIVLGDAL-------IGLEVTLQYTAYEKWNVITRAARFENK--GGERLKLLRALSMSVDFPTADYDWIHLPGAW 199 (729)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEESSSSEEEEEEEEEEC--SSSCEEEEEEEEEEEEESCCCEEEEEEECCT
T ss_pred ceEEEEEEEeCC-------CCeEEEEEEEEECCCCEEEEEEEEEEC--CCCCEEEeEeeeecCcCCCCcceEEEccCCc
Confidence 456666666321 35789999999542 467777899999 988877765555555555432 1 3455543
Done!