BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036765
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 285 SSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKV 344
+S+ S + + KLC ICY + N F+PCGH C C + K CP+CR V
Sbjct: 378 NSSGSTSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSVTK-----CPLCRKPFTDV 432
Query: 345 RRLF 348
R++
Sbjct: 433 MRVY 436
>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3
PE=2 SV=1
Length = 254
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 259 DPLVHEKP---VQFTYGTTNNDE--DDDAGFSSTSSDDLYDAKL-----CVICYDDQRNC 308
D LV P V YGTT E D A TS + + ++++ CVIC+ + N
Sbjct: 148 DVLVQGAPLWAVMDVYGTTKAIELLDPKANAWITSGEPMPESEVTSGEECVICFHNTANT 207
Query: 309 FFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKV 344
+PCGH C C I KD ++ CP+CR I +V
Sbjct: 208 RLMPCGHSQFCGSCAWHIFKDTAR-CPMCRWQIEEV 242
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L DA+LC +C D++ F+PCGH ATC C + CP+CR I R F
Sbjct: 445 LKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVAN-----CPMCRADIKGFVRTF 496
>sp|Q8CJC5|NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL3 OS=Mus musculus GN=Neurl3 PE=2
SV=1
Length = 254
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 259 DPLVHEKP---VQFTYGTTNNDE--DDDAGFSSTSSDDLYDAKL-----CVICYDDQRNC 308
D LV P V YGTT E D A S + + ++++ CVIC+ + N
Sbjct: 148 DVLVQGAPLWAVMDVYGTTKAIELLDPKANAWIRSGEPVPESEVISGEECVICFHNTANT 207
Query: 309 FFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKV 344
+PCGH C C I KD ++ CPICR I +V
Sbjct: 208 RLMPCGHSHFCGSCAWHIFKDTAR-CPICRWQIEEV 242
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
L +A LC++C +++ N F PCGH C C ++ + CP+CR+ + V+ ++ P
Sbjct: 381 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEHVQHVYLP 434
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
L +A LC++C +++ N F PCGH C C ++ + CP+CR+ + V+ ++ P
Sbjct: 381 LKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEHVQHVYLP 434
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 200 NGDLDGWHVEVSFAARLIIYIAILGFITLIIFLVSKYLGACDGNS------DNTDSTAAR 253
NG G + V + L + ++ G IT + L S + G S S +A
Sbjct: 414 NGAAAGMQLCVDASQPLWMLFSLHGAITQVRILGSTIMTERGGPSLPCSPASTPTSPSAL 473
Query: 254 EVTETDPLVH---EKPVQFTYGTTNNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFF 310
+ +DPL+ P+ + G T + S + + C ICY+ +
Sbjct: 474 GIRLSDPLLSTCGSGPLGGSAGGTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVI 533
Query: 311 VPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
CGH CY CG R+ K CPICR I + + +
Sbjct: 534 YTCGHMCLCYSCGLRLKKALHACCPICRRPIKDIIKTY 571
>sp|Q86XN8|MEX3D_HUMAN RNA-binding protein MEX3D OS=Homo sapiens GN=MEX3D PE=1 SV=3
Length = 651
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 285 SSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKV 344
S++S+ L A+ CV+C + + VPCGH C DC RI CP CRT +
Sbjct: 589 SASSAPAL--ARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQA 646
Query: 345 RRLFT 349
+F+
Sbjct: 647 IHIFS 651
>sp|Q3UE17|MEX3D_MOUSE RNA-binding protein MEX3D OS=Mus musculus GN=Mex3d PE=2 SV=2
Length = 643
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 295 AKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
A+ CV+C + + VPCGH C DC RI CP CRT + +F+
Sbjct: 589 ARECVVCSEGEAMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS 643
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 273 TTNNDEDDDAGFSSTSSDD----LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMK 328
TT N+ + + S ++ L D KLC IC D F+PCGH TC C + + +
Sbjct: 160 TTENESNQTSLQREISPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR 219
Query: 329 DDSKVCPICRTLIHKVRRLF 348
CP+C +I +R+F
Sbjct: 220 -----CPMCSAVIDFKQRVF 234
>sp|Q69Z36|MEX3B_MOUSE RNA-binding protein MEX3B OS=Mus musculus GN=Mex3b PE=2 SV=2
Length = 601
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
C +C++ + VPCGH C +C RI + CP+C T + + R+F+
Sbjct: 550 CSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 601
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C DC + K CPICR+ I R F
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRK-----CPICRSTIKGTVRTF 602
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
L +A LC+ C +++ N F PCGH C C ++ + CP+CR+ + V+ ++ P
Sbjct: 381 LKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEHVQHVYLP 434
>sp|Q6ZN04|MEX3B_HUMAN RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B PE=1 SV=1
Length = 569
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
C +C++ + VPCGH C +C RI + CP+C T + + R+F+
Sbjct: 518 CSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS 569
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
C +C+D + + CGH C+ CG R+ + CPICR I V +++ P
Sbjct: 494 CTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKIYRP 546
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + ++C +C D + + F+PCGH C DC + K CPICR I R F
Sbjct: 547 LQEERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLRK-----CPICRGTIKGTVRTF 598
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
C +C+D + + CGH C+ CG R+ + CPICR I V +++ P
Sbjct: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYRP 555
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
L +A LC++C +++ + F PCGH C +C ++ + CP+CR+ + V+ ++ P
Sbjct: 378 LREALLCMLCCEEEIDAAFCPCGHMVCCQNCAAQL-----QSCPVCRSEVEHVQHVYLP 431
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C +C + K CPICR +I R F
Sbjct: 565 LQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRK-----CPICRGIIKGTVRTF 616
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 273 TTNNDEDDDAGFSSTSSDD----LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMK 328
TT N+ + + S ++ L + KLC IC D F+PCGH TC C + + +
Sbjct: 160 TTENESNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR 219
Query: 329 DDSKVCPICRTLIHKVRRLF 348
CP+C +I +R+F
Sbjct: 220 -----CPMCNAVIDFKQRVF 234
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 11/159 (6%)
Query: 200 NGDLDGWHVEVSFAARLIIYIAILGFITLIIFLVSKYLG-------ACDGNSDNTDSTAA 252
NG G + V + L + + G IT I L S L C S T S +A
Sbjct: 414 NGAAAGMQLCVDASQPLWMLFGLHGTITQIRILGSTILAERGIPSLPCSPASTPT-SPSA 472
Query: 253 REVTETDPLVH---EKPVQFTYGTTNNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCF 309
+DPL+ P+ + G T + S + + C ICY+ +
Sbjct: 473 LGSRLSDPLLSTCSSGPLGSSAGGTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTV 532
Query: 310 FVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
CGH CY CG R+ K CPICR I + + +
Sbjct: 533 IYTCGHMCLCYACGLRLKKALHACCPICRRPIKDIIKTY 571
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHK 343
CV+C ++ + F+PC H C+ C Q K+ CP CR IH+
Sbjct: 768 CVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHR 813
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + KLC IC D FVPCGH TC C + + K CP+C T+I +++F
Sbjct: 443 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDK-----CPMCYTVITFKQKIF 494
>sp|Q05A36|MEX3C_MOUSE RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Mus musculus
GN=Mex3c PE=2 SV=2
Length = 652
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
CVIC++++ VPCGH C +C +I + + CP+C+T + + ++ +
Sbjct: 601 CVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS 652
>sp|Q5U5Q3|MEX3C_HUMAN RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Homo sapiens
GN=MEX3C PE=1 SV=3
Length = 659
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
CVIC++++ VPCGH C +C +I + + CP+C+T + + ++ +
Sbjct: 608 CVICFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS 659
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + KLC IC D FVPCGH TC C + + K CP+C T+I +++F
Sbjct: 444 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDK-----CPMCYTVITFKQKIF 495
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 297 LCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
LC +C D++ N F+ CGH + C C ++ K CPICR+ I +V +F
Sbjct: 617 LCTVCMDNEINTVFLECGHLSCCSLCSVKLKK-----CPICRSRITRVINIF 663
>sp|A1L3F4|MEX3B_XENLA RNA-binding protein MEX3B OS=Xenopus laevis GN=mex3b PE=2 SV=1
Length = 507
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 295 AKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFT 349
++ C IC++ + VPCGH C +C RI + + CP+C + + R+F+
Sbjct: 453 SRECSICFESEVIAALVPCGHNLFCMECANRICEKNQPQCPVCHAGVTQAIRIFS 507
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLFTP 350
L +A C +C + + + F PCGH CY+C ++ + CP+CR+ + +V+ ++ P
Sbjct: 375 LQEALTCALCCEQEISAAFCPCGHMFCCYNCASQL-----QCCPVCRSEVDRVQHVYLP 428
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 297 LCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
LCVIC D VPCGH A C C + I ++ CP+CR I +V +L+
Sbjct: 324 LCVICVDAPSEAVCVPCGHVAGCISCLKEI-ENKKMGCPVCRANIDQVIKLY 374
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C DC + K CPICR + R F
Sbjct: 551 LQEERTCKVCMDKEVSIVFIPCGHLVVCRDCAPSLRK-----CPICRGTVRGTVRTF 602
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + KLC IC D F+PCGH TC C + + + CP+C +I +R+F
Sbjct: 183 LQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR-----CPMCSAVIDFKQRVF 234
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + KLC IC D FVPCGH TC C + + K CP+C T+I +++F
Sbjct: 443 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDK-----CPMCCTVITFKQKIF 494
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 275 NNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVC 334
N+E+ + D D LC IC D +C + CGH TC CG+R+ + C
Sbjct: 306 ENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----C 360
Query: 335 PICRTLIHKVRRLF 348
PICR + + +F
Sbjct: 361 PICRQYVVRAVHVF 374
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 290 DDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLI 341
D L D CVIC + N +PC H + C DC ++ K CPICR+ I
Sbjct: 889 DQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTK-----CPICRSHI 935
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 275 NNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVC 334
N+E+ + D D LC IC D +C + CGH TC CG+R+ + C
Sbjct: 311 ENEENQKSYGERMQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----C 365
Query: 335 PICRTLIHKVRRLF 348
PICR + + +F
Sbjct: 366 PICRQYVVRAVHVF 379
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + ++C +C D + FVPCGH C +C + + CPICR I R F
Sbjct: 348 LKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNL-----RHCPICRAAIRGSVRAF 399
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 280 DDAGFSSTSSDDLYD--AKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPIC 337
D++ T++ L D K CVIC + ++ +PC H C DC + + +K CPIC
Sbjct: 301 DNSITQGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNK-CPIC 359
Query: 338 RTLIHKVRRL 347
R IH++ ++
Sbjct: 360 RQPIHELVKI 369
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C +C + K CPICR I R F
Sbjct: 558 LQEERTCKVCMDKEVSIVFIPCGHLVVCKECAPSLRK-----CPICRGTIKGTVRTF 609
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 276 NDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCP 335
N+E+ + D D LC IC D +C + CGH TC CG+R+ + CP
Sbjct: 306 NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----CP 360
Query: 336 ICRTLIHKVRRLF 348
ICR + + +F
Sbjct: 361 ICRQYVVRAVHVF 373
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 276 NDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCP 335
N+E+ + D D LC IC D +C + CGH TC CG+R+ + CP
Sbjct: 303 NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----CP 357
Query: 336 ICRTLIHKVRRLF 348
ICR + + +F
Sbjct: 358 ICRQYVVRAVHVF 370
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C +C + K CPICR I R F
Sbjct: 559 LQEERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRK-----CPICRGTIKGTVRTF 610
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 276 NDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCP 335
N+E+ + D D LC IC D +C + CGH TC CG+R+ + CP
Sbjct: 303 NEENQKSYGERLQLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSE-----CP 357
Query: 336 ICRTLIHKVRRLF 348
ICR + + +F
Sbjct: 358 ICRQYVVRAVHVF 370
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
C IC +++C F+ CGH +C C Q + K CPICR I ++ L+
Sbjct: 303 CSICLSTEKSCVFLECGHVCSCISCYQAL--PSPKKCPICRNFIDRIVPLY 351
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + ++C +C D + FVPCGH C +C + + CPICR I R F
Sbjct: 292 LKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNL-----RHCPICRAAIRGSVRAF 343
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 292 LYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPICRTLIHKVRRLF 348
L + + C +C D + + F+PCGH C DC + K CPICR I R F
Sbjct: 305 LQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRK-----CPICRGTIKGTVRTF 356
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 298 CVICYDDQRNCFFVPCGHCATCYDCGQRIMKD-DSKV--CPICRTLIHKVRRLFT 349
CVIC D +PCGH A C C +KD +SK CPICR I+++ RL+
Sbjct: 462 CVICLDAPVEGACIPCGHMAGCMSC----LKDIESKKWGCPICRAKINQIIRLYA 512
>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1
Length = 747
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 265 KPVQFTYGTTNNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCG- 323
+PV + T N + D+ S+D + C ICY++ + CGH CYDC
Sbjct: 664 EPVAQSTSTLNGTKWKDSLSDQQSTDSSAE---CTICYENPIDSVLYMCGHMCMCYDCAI 720
Query: 324 QRIMKDDSKVCPICRTLIHKVRRLFT 349
++ CP+CR +I V R +T
Sbjct: 721 EQWRGVGGGQCPLCRAVIRDVIRTYT 746
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 275 NNDEDDDAGFSSTSSDDLYDAKLCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVC 334
+ +ED + G + ++ LC IC D +C + CGH TC CG+R+ + C
Sbjct: 311 SGNEDQNGGAVPSGLEE----NLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE-----C 361
Query: 335 PICRTLIHKVRRLF 348
PICR + + +F
Sbjct: 362 PICRQYVIRAVHVF 375
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 278 EDDDAGFSSTSSDDLYDAK-LCVICYDDQRNCFFVPCGHCATCYDCGQRIMKDDSKVCPI 336
E + S S +D K CV+C + ++C F+ CGH +C C + + K CPI
Sbjct: 281 EHEAQLLSQASPEDRESLKSACVVCLSNFKSCVFLECGHVCSCRQC--YLALPEPKRCPI 338
Query: 337 CRTLIHKVRRLF 348
CR I +V L+
Sbjct: 339 CRREITRVIPLY 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,937,543
Number of Sequences: 539616
Number of extensions: 5169784
Number of successful extensions: 13733
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 13550
Number of HSP's gapped (non-prelim): 263
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)