Query 036766
Match_columns 470
No_of_seqs 296 out of 2120
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:26:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 1.4E-81 4.6E-86 657.6 1.0 373 97-470 1-428 (428)
2 1scz_A E2, dihydrolipoamide su 100.0 5.7E-64 1.9E-68 485.7 24.5 230 241-470 4-233 (233)
3 3mae_A 2-oxoisovalerate dehydr 100.0 5.7E-64 1.9E-68 490.9 23.7 231 238-468 15-245 (256)
4 3l60_A Branched-chain alpha-ke 100.0 1.9E-62 6.5E-67 478.6 25.3 224 240-469 14-241 (250)
5 1dpb_A Dihydrolipoyl-transacet 100.0 5.6E-62 1.9E-66 474.5 25.7 228 240-468 14-243 (243)
6 2ii3_A Lipoamide acyltransfera 100.0 2.3E-61 8E-66 474.4 24.4 230 239-470 29-261 (262)
7 3rqc_A Probable lipoamide acyl 100.0 6.2E-61 2.1E-65 461.8 19.6 218 240-470 5-224 (224)
8 3b8k_A PDCE2;, dihydrolipoylly 100.0 2.6E-61 8.8E-66 469.0 13.8 227 240-468 11-239 (239)
9 2xt6_A 2-oxoglutarate decarbox 100.0 1.4E-47 4.8E-52 438.5 17.0 210 256-466 1-225 (1113)
10 1q23_A Chloramphenicol acetylt 100.0 2.5E-44 8.6E-49 345.0 23.4 192 250-463 18-215 (219)
11 3cla_A Type III chloramphenico 100.0 9E-44 3.1E-48 339.9 24.6 182 262-462 23-210 (213)
12 2i9d_A Chloramphenicol acetylt 100.0 6E-42 2.1E-46 327.8 23.0 180 262-460 25-216 (217)
13 2dnc_A Pyruvate dehydrogenase 99.8 9.9E-19 3.4E-23 146.7 11.4 85 94-178 3-88 (98)
14 3crk_C Dihydrolipoyllysine-res 99.8 1.4E-18 4.8E-23 142.4 12.0 82 96-177 3-85 (87)
15 2dne_A Dihydrolipoyllysine-res 99.8 2.7E-19 9.1E-24 152.8 7.8 84 94-177 3-87 (108)
16 1y8o_B Dihydrolipoyllysine-res 99.8 1.3E-18 4.5E-23 152.6 12.0 86 93-178 22-108 (128)
17 1k8m_A E2 component of branche 99.7 4E-18 1.4E-22 141.6 10.5 81 97-177 3-83 (93)
18 1ghj_A E2, E2, the dihydrolipo 99.7 2.5E-17 8.6E-22 132.3 9.0 76 99-174 2-77 (79)
19 1zy8_K Pyruvate dehydrogenase 99.7 2.9E-18 9.8E-23 164.8 0.0 80 97-176 2-82 (229)
20 2l5t_A Lipoamide acyltransfera 99.7 1.5E-16 5E-21 127.0 8.6 75 99-173 2-76 (77)
21 1qjo_A Dihydrolipoamide acetyl 99.7 1.9E-16 6.6E-21 127.2 8.9 78 97-176 1-78 (80)
22 1pmr_A Dihydrolipoyl succinylt 99.7 4.1E-18 1.4E-22 137.3 -1.0 76 99-174 3-78 (80)
23 1iyu_A E2P, dihydrolipoamide a 99.6 1.9E-15 6.5E-20 121.2 9.4 75 99-176 2-76 (79)
24 1gjx_A Pyruvate dehydrogenase; 99.6 7.8E-16 2.7E-20 124.0 4.2 76 99-175 3-78 (81)
25 2k7v_A Dihydrolipoyllysine-res 99.5 4.1E-15 1.4E-19 121.1 1.2 72 99-176 3-74 (85)
26 1z6h_A Biotin/lipoyl attachmen 99.4 1.5E-12 5E-17 102.0 8.6 65 111-175 6-70 (72)
27 2kcc_A Acetyl-COA carboxylase 99.4 7E-13 2.4E-17 107.7 6.6 66 111-177 12-77 (84)
28 2jku_A Propionyl-COA carboxyla 99.3 5.3E-13 1.8E-17 110.8 2.9 77 97-173 14-94 (94)
29 2dn8_A Acetyl-COA carboxylase 99.3 4.6E-12 1.6E-16 106.2 8.4 66 111-177 24-89 (100)
30 2d5d_A Methylmalonyl-COA decar 99.3 1.6E-11 5.5E-16 96.3 8.9 63 111-173 12-74 (74)
31 2ejm_A Methylcrotonoyl-COA car 99.2 1.9E-11 6.3E-16 102.3 9.0 67 111-177 21-87 (99)
32 1dcz_A Transcarboxylase 1.3S s 99.2 1.9E-11 6.5E-16 96.9 8.2 63 111-173 15-77 (77)
33 1bdo_A Acetyl-COA carboxylase; 99.2 1.6E-11 5.3E-16 98.4 7.1 62 112-173 12-80 (80)
34 3n6r_A Propionyl-COA carboxyla 99.1 6.6E-11 2.3E-15 130.4 8.8 63 111-173 619-681 (681)
35 3va7_A KLLA0E08119P; carboxyla 99.1 1.7E-10 6E-15 134.0 8.9 61 112-172 1175-1235(1236)
36 3u9t_A MCC alpha, methylcroton 99.0 2.2E-11 7.5E-16 134.1 0.0 65 111-175 609-673 (675)
37 3hbl_A Pyruvate carboxylase; T 99.0 2.4E-10 8.3E-15 132.3 8.6 65 111-175 1084-1148(1150)
38 2k32_A A; NMR {Campylobacter j 98.8 5.3E-09 1.8E-13 89.4 6.0 67 111-177 8-104 (116)
39 3bg3_A Pyruvate carboxylase, m 98.8 1.6E-09 5.6E-14 119.3 2.7 62 111-172 656-717 (718)
40 1zko_A Glycine cleavage system 98.8 1.1E-08 3.6E-13 90.4 6.9 71 101-177 39-117 (136)
41 2qf7_A Pyruvate carboxylase pr 98.7 5.8E-09 2E-13 121.0 4.9 63 111-173 1102-1164(1165)
42 1onl_A Glycine cleavage system 98.3 9.4E-07 3.2E-11 77.1 6.8 70 102-177 31-108 (128)
43 1hpc_A H protein of the glycin 98.2 5.9E-07 2E-11 78.7 3.9 63 114-176 37-107 (131)
44 3a7l_A H-protein, glycine clea 98.2 1.6E-06 5.4E-11 75.7 5.6 70 101-176 31-108 (128)
45 3ne5_B Cation efflux system pr 97.8 2.2E-05 7.6E-10 81.3 7.5 66 111-176 128-242 (413)
46 2f1m_A Acriflavine resistance 97.8 6.6E-06 2.3E-10 80.1 3.0 67 111-177 29-168 (277)
47 3lnn_A Membrane fusion protein 97.8 2.3E-05 7.7E-10 79.1 6.6 67 111-177 64-207 (359)
48 3fpp_A Macrolide-specific effl 97.8 2.5E-05 8.5E-10 78.2 6.0 66 111-176 38-191 (341)
49 3klr_A Glycine cleavage system 97.5 0.0001 3.4E-09 63.8 6.0 78 98-176 18-103 (125)
50 1vf7_A Multidrug resistance pr 97.5 3.7E-05 1.3E-09 78.3 2.6 66 111-176 50-174 (369)
51 3mxu_A Glycine cleavage system 97.4 0.00018 6.1E-09 63.6 5.9 61 98-159 40-101 (143)
52 3tzu_A GCVH, glycine cleavage 97.3 0.00018 6.2E-09 63.2 5.1 59 97-156 34-93 (137)
53 4dk0_A Putative MACA; alpha-ha 97.0 3.8E-05 1.3E-09 77.7 -2.9 65 111-175 39-191 (369)
54 3hgb_A Glycine cleavage system 97.0 0.00077 2.6E-08 60.2 5.9 58 98-156 45-103 (155)
55 2dn8_A Acetyl-COA carboxylase 96.6 0.0011 3.7E-08 54.8 2.9 48 129-176 5-52 (100)
56 3na6_A Succinylglutamate desuc 96.4 0.0063 2.2E-07 61.1 8.2 62 113-176 265-330 (331)
57 3cdx_A Succinylglutamatedesucc 96.4 0.0087 3E-07 60.5 8.8 61 115-177 277-341 (354)
58 3fmc_A Putative succinylglutam 96.1 0.012 4E-07 60.0 8.2 61 113-175 298-364 (368)
59 1z6h_A Biotin/lipoyl attachmen 96.1 0.0071 2.4E-07 46.2 4.9 34 143-176 1-34 (72)
60 2d5d_A Methylmalonyl-COA decar 95.9 0.0097 3.3E-07 45.5 5.1 35 142-176 6-40 (74)
61 1dcz_A Transcarboxylase 1.3S s 95.9 0.0086 2.9E-07 46.4 4.8 36 141-176 8-43 (77)
62 2k32_A A; NMR {Campylobacter j 95.5 0.013 4.5E-07 49.2 4.7 34 142-175 2-35 (116)
63 2kcc_A Acetyl-COA carboxylase 95.1 0.013 4.5E-07 46.6 3.3 35 142-176 6-40 (84)
64 1f3z_A EIIA-GLC, glucose-speci 95.1 0.018 6.2E-07 51.8 4.4 60 111-174 19-117 (161)
65 2gpr_A Glucose-permease IIA co 94.6 0.023 7.8E-07 50.8 3.9 60 111-174 14-112 (154)
66 2qj8_A MLR6093 protein; struct 94.6 0.072 2.5E-06 53.2 7.9 61 113-175 265-329 (332)
67 2jku_A Propionyl-COA carboxyla 94.3 0.022 7.4E-07 46.4 2.7 36 141-176 25-60 (94)
68 2ejm_A Methylcrotonoyl-COA car 94.2 0.034 1.2E-06 45.6 3.7 37 140-176 13-49 (99)
69 1ax3_A Iiaglc, glucose permeas 94.0 0.027 9.2E-07 50.7 3.0 60 111-174 19-117 (162)
70 2f1m_A Acriflavine resistance 93.9 0.049 1.7E-06 52.4 4.8 52 123-175 5-56 (277)
71 1bdo_A Acetyl-COA carboxylase; 93.9 0.043 1.5E-06 42.8 3.6 35 142-176 5-46 (80)
72 2xha_A NUSG, transcription ant 93.7 0.056 1.9E-06 49.8 4.5 32 117-154 22-53 (193)
73 3lnn_A Membrane fusion protein 93.1 0.097 3.3E-06 52.2 5.6 56 121-176 36-92 (359)
74 2l5t_A Lipoamide acyltransfera 93.0 0.041 1.4E-06 42.6 2.2 32 145-176 11-42 (77)
75 3fpp_A Macrolide-specific effl 92.2 0.12 4E-06 51.2 4.8 55 120-175 11-65 (341)
76 3crk_C Dihydrolipoyllysine-res 92.1 0.11 3.7E-06 41.4 3.6 30 147-176 17-46 (87)
77 1ghj_A E2, E2, the dihydrolipo 92.1 0.069 2.4E-06 41.5 2.3 31 146-176 12-42 (79)
78 1gjx_A Pyruvate dehydrogenase; 92.0 0.11 3.7E-06 40.5 3.5 33 144-176 10-42 (81)
79 1qjo_A Dihydrolipoamide acetyl 91.9 0.16 5.4E-06 39.4 4.2 28 149-176 14-41 (80)
80 1k8m_A E2 component of branche 91.6 0.18 6.2E-06 40.7 4.5 30 147-176 16-45 (93)
81 3d4r_A Domain of unknown funct 91.6 0.19 6.5E-06 45.0 4.9 46 111-156 107-153 (169)
82 2dnc_A Pyruvate dehydrogenase 91.0 0.2 7E-06 40.9 4.3 29 148-176 20-48 (98)
83 2xhc_A Transcription antitermi 91.0 0.2 6.7E-06 50.6 4.9 48 117-170 62-138 (352)
84 2k7v_A Dihydrolipoyllysine-res 90.9 0.017 5.9E-07 45.9 -2.4 35 142-176 3-37 (85)
85 3ne5_B Cation efflux system pr 90.4 0.22 7.6E-06 51.0 4.8 56 121-176 100-157 (413)
86 2dne_A Dihydrolipoyllysine-res 90.0 0.17 5.8E-06 42.2 2.9 30 147-176 19-48 (108)
87 1vf7_A Multidrug resistance pr 89.4 0.19 6.4E-06 50.6 3.2 45 130-175 33-77 (369)
88 2xha_A NUSG, transcription ant 88.5 0.2 6.7E-06 46.2 2.4 46 120-171 85-158 (193)
89 1y8o_B Dihydrolipoyllysine-res 88.2 0.34 1.1E-05 41.8 3.5 30 148-177 40-69 (128)
90 1pmr_A Dihydrolipoyl succinylt 88.0 0.11 3.7E-06 40.6 0.3 30 147-176 14-43 (80)
91 2auk_A DNA-directed RNA polyme 87.6 0.53 1.8E-05 43.3 4.7 45 117-163 63-107 (190)
92 4dk0_A Putative MACA; alpha-ha 86.6 0.18 6.3E-06 50.3 1.1 55 121-176 13-67 (369)
93 1iyu_A E2P, dihydrolipoamide a 85.9 0.52 1.8E-05 36.4 3.2 34 99-138 42-75 (79)
94 3n6r_A Propionyl-COA carboxyla 85.9 0.63 2.1E-05 51.0 5.0 36 141-176 612-647 (681)
95 3our_B EIIA, phosphotransferas 85.2 1.2 4.1E-05 40.6 5.6 59 112-174 42-139 (183)
96 3va7_A KLLA0E08119P; carboxyla 81.2 1.2 4.2E-05 52.0 5.0 37 140-176 1166-1202(1236)
97 3hbl_A Pyruvate carboxylase; T 80.6 1.2 4.2E-05 51.6 4.8 35 142-176 1078-1112(1150)
98 3bg3_A Pyruvate carboxylase, m 80.6 1 3.5E-05 49.6 3.9 35 142-176 650-684 (718)
99 4hvm_A Tlmii; PSI-biology, mid 79.8 28 0.00096 35.3 14.5 28 434-461 135-162 (493)
100 3lu0_D DNA-directed RNA polyme 75.6 2 6.9E-05 49.9 4.5 36 117-154 1002-1037(1407)
101 3u9t_A MCC alpha, methylcroton 75.2 0.59 2E-05 51.2 0.0 35 142-176 603-637 (675)
102 2gpr_A Glucose-permease IIA co 74.8 1.2 4.2E-05 39.5 2.0 70 99-172 73-153 (154)
103 2qf7_A Pyruvate carboxylase pr 74.3 2.2 7.5E-05 49.6 4.4 35 142-176 1096-1130(1165)
104 2xhc_A Transcription antitermi 71.8 2.3 7.9E-05 42.8 3.4 28 120-153 125-152 (352)
105 2bco_A Succinylglutamate desuc 71.6 3.5 0.00012 41.2 4.7 51 119-176 280-330 (350)
106 1zy8_K Pyruvate dehydrogenase 71.3 0.82 2.8E-05 43.2 0.0 32 146-177 14-45 (229)
107 3fot_A 15-O-acetyltransferase; 66.4 72 0.0025 33.4 13.7 167 283-460 290-514 (519)
108 3our_B EIIA, phosphotransferas 63.9 3.5 0.00012 37.5 2.6 28 112-139 114-141 (183)
109 3dva_I Dihydrolipoyllysine-res 61.5 1.7 5.8E-05 44.9 0.0 30 147-176 14-43 (428)
110 1brw_A PYNP, protein (pyrimidi 58.2 12 0.00042 38.5 5.8 43 135-177 329-402 (433)
111 3fmc_A Putative succinylglutam 57.4 8.5 0.00029 38.7 4.4 33 141-174 290-322 (368)
112 2dsj_A Pyrimidine-nucleoside ( 57.3 11 0.00038 38.7 5.3 42 135-177 322-394 (423)
113 3na6_A Succinylglutamate desuc 54.0 10 0.00034 37.5 4.2 34 141-175 257-290 (331)
114 1qpo_A Quinolinate acid phosph 52.6 9.1 0.00031 37.2 3.5 24 114-137 71-94 (284)
115 1f3z_A EIIA-GLC, glucose-speci 52.4 7.3 0.00025 34.7 2.6 27 112-138 92-118 (161)
116 2bgh_A Vinorine synthase; VS, 52.0 11 0.00039 38.0 4.4 29 433-461 152-180 (421)
117 2xr7_A Malonyltransferase; xen 51.9 11 0.00038 38.4 4.3 29 433-461 157-185 (453)
118 2e1v_A Acyl transferase; BAHD 51.7 12 0.00042 38.1 4.6 29 433-461 162-190 (454)
119 3h5q_A PYNP, pyrimidine-nucleo 51.6 16 0.00055 37.6 5.4 38 136-173 333-401 (436)
120 2rkv_A Trichothecene 3-O-acety 51.5 12 0.0004 38.1 4.4 30 433-462 148-177 (451)
121 1x1o_A Nicotinate-nucleotide p 49.9 8.7 0.0003 37.4 2.9 22 116-137 74-95 (286)
122 3tqv_A Nicotinate-nucleotide p 49.5 9 0.00031 37.3 2.9 22 116-137 77-98 (287)
123 1zko_A Glycine cleavage system 49.4 15 0.0005 31.8 3.9 34 144-177 39-73 (136)
124 1o4u_A Type II quinolic acid p 49.0 8.3 0.00028 37.5 2.6 22 116-137 73-94 (285)
125 3l0g_A Nicotinate-nucleotide p 49.0 9.8 0.00034 37.3 3.1 21 116-136 86-106 (300)
126 4g22_A Hydroxycinnamoyl-COA sh 49.0 15 0.0005 37.5 4.6 29 433-461 150-178 (439)
127 2b7n_A Probable nicotinate-nuc 48.7 11 0.00039 36.2 3.5 22 116-137 60-81 (273)
128 2tpt_A Thymidine phosphorylase 46.8 12 0.00042 38.6 3.6 43 135-177 334-407 (440)
129 3gnn_A Nicotinate-nucleotide p 46.8 10 0.00036 37.1 2.9 21 116-136 88-108 (298)
130 1ax3_A Iiaglc, glucose permeas 46.6 8.5 0.00029 34.3 2.1 30 110-139 90-119 (162)
131 1uou_A Thymidine phosphorylase 45.9 26 0.00088 36.5 5.9 43 135-177 366-437 (474)
132 3paj_A Nicotinate-nucleotide p 45.6 11 0.00038 37.3 2.9 22 115-136 109-130 (320)
133 1qap_A Quinolinic acid phospho 44.7 12 0.0004 36.6 2.9 24 115-138 86-109 (296)
134 1l5a_A Amide synthase, VIBH; n 44.6 2.3E+02 0.0079 27.6 16.1 143 296-461 231-402 (436)
135 2vsq_A Surfactin synthetase su 43.8 1.7E+02 0.0058 34.0 13.1 149 296-461 251-426 (1304)
136 1hpc_A H protein of the glycin 42.6 24 0.00081 30.2 4.2 32 145-176 31-63 (131)
137 1brw_A PYNP, protein (pyrimidi 41.8 15 0.0005 37.9 3.2 32 109-140 371-402 (433)
138 2dsj_A Pyrimidine-nucleoside ( 41.6 15 0.0005 37.8 3.1 32 109-140 363-394 (423)
139 1l5a_A Amide synthase, VIBH; n 41.0 2.6E+02 0.0089 27.2 13.7 28 434-461 119-146 (436)
140 3cdx_A Succinylglutamatedesucc 39.7 30 0.001 34.3 5.1 39 136-175 262-300 (354)
141 2jbm_A Nicotinate-nucleotide p 39.2 14 0.00046 36.2 2.4 21 116-136 73-93 (299)
142 3it5_A Protease LASA; metallop 39.1 11 0.00039 34.0 1.7 18 157-174 87-104 (182)
143 1uou_A Thymidine phosphorylase 38.9 18 0.0006 37.8 3.3 31 110-140 407-437 (474)
144 3d4r_A Domain of unknown funct 37.4 39 0.0013 30.1 4.8 42 126-178 96-137 (169)
145 3h5q_A PYNP, pyrimidine-nucleo 34.7 18 0.00061 37.3 2.5 32 109-140 374-405 (436)
146 1q9j_A PAPA5, polyketide synth 32.0 3.5E+02 0.012 26.0 14.7 68 296-373 234-316 (422)
147 3a7l_A H-protein, glycine clea 31.9 50 0.0017 28.0 4.5 31 146-176 33-64 (128)
148 1onl_A Glycine cleavage system 31.3 52 0.0018 27.8 4.5 32 145-176 31-63 (128)
149 3it5_A Protease LASA; metallop 31.3 36 0.0012 30.6 3.7 21 116-136 83-103 (182)
150 2tpt_A Thymidine phosphorylase 29.8 19 0.00064 37.2 1.7 32 109-140 376-407 (440)
151 2hsi_A Putative peptidase M23; 29.0 23 0.00079 34.2 2.1 22 155-176 232-253 (282)
152 1qwy_A Peptidoglycan hydrolase 29.0 24 0.00081 34.4 2.2 22 155-176 239-260 (291)
153 3tuf_B Stage II sporulation pr 28.6 23 0.0008 33.5 2.0 25 113-137 130-154 (245)
154 3c2e_A Nicotinate-nucleotide p 27.0 25 0.00085 34.2 2.0 21 116-136 69-95 (294)
155 1q9j_A PAPA5, polyketide synth 24.9 52 0.0018 32.2 3.9 27 435-461 118-144 (422)
156 3nyy_A Putative glycyl-glycine 24.1 32 0.0011 32.7 2.0 21 156-176 183-203 (252)
157 2qj8_A MLR6093 protein; struct 23.2 72 0.0025 31.1 4.6 34 141-175 257-290 (332)
158 2lmc_B DNA-directed RNA polyme 23.0 10 0.00034 30.1 -1.4 15 119-133 68-82 (84)
159 1hcz_A Cytochrome F; electron 22.5 1.1E+02 0.0036 28.7 5.1 51 111-170 175-228 (252)
160 3mfy_A V-type ATP synthase alp 21.8 1.3E+02 0.0045 32.0 6.4 55 119-175 123-180 (588)
161 1yw4_A Succinylglutamate desuc 20.8 20 0.00068 35.5 -0.1 35 119-153 278-317 (341)
162 2gu1_A Zinc peptidase; alpha/b 20.8 41 0.0014 33.5 2.2 22 155-176 284-305 (361)
163 3vr4_A V-type sodium ATPase ca 20.5 1.5E+02 0.0053 31.6 6.6 54 120-176 131-187 (600)
164 3tuf_B Stage II sporulation pr 20.4 1.2E+02 0.0042 28.5 5.3 57 110-175 99-155 (245)
165 3csq_A Morphogenesis protein 1 20.4 26 0.00088 34.6 0.6 21 117-137 250-270 (334)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=1.4e-81 Score=657.64 Aligned_cols=373 Identities=31% Similarity=0.531 Sum_probs=2.8
Q ss_pred ceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 97 DLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 97 ~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
|.++|+||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+.|++|++|+.|+.++
T Consensus 1 M~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 1 MAFEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeeEEcCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCC--C--CC---CCCC-CCCCC---CCCcc-----cccC----CCCCCccccc---------------cC----C
Q 036766 177 EGVAHVA--P--SE---KIPE-KAAPK---PPSAE-----KAKE----DKPQPKVETV---------------SE----K 217 (470)
Q Consensus 177 ~~~~~~~--~--~~---~~~~-~~a~~---~~~~~-----~~~~----~~~~~~~~~~---------------~~----~ 217 (470)
++..... + .+ ..+. .+++. ++.+. .... ....|.+++. +. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v~gtG~~GrI~k 160 (428)
T 3dva_I 81 YENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLK 160 (428)
T ss_dssp -----------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCCCSTTSCCCT
T ss_pred ccccccccccccccccCCCcccCCccccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHCCCCCCCCceeH
Confidence 4321110 0 00 0000 00000 00000 0000 0112222210 00 0
Q ss_pred CCCCCC--------CCCC--CCCCCCCC----CCCCccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHH
Q 036766 218 PKAPSP--------PPPK--RTATEPQL----PPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRS 283 (470)
Q Consensus 218 ~~~~a~--------~~~~--~~~~~~~~----~~~~~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk 283 (470)
.+..+. +.+. .....+.. .....++++||++|||+||++|.+|++++||||++.+||||+|+++|+
T Consensus 161 ~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~rk 240 (428)
T 3dva_I 161 EDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRK 240 (428)
T ss_dssp TTTTTTSCC-----------------------------------------------------------------------
T ss_pred HHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEEeHHHHHHHHH
Confidence 111000 0000 00000000 011235789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEeC--CeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHH
Q 036766 284 EYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVIDG--DDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIE 361 (470)
Q Consensus 284 ~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~~--~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~ 361 (470)
++|+.+ ++.|.|+||++||+||+++||++||+||++|++ ++|++|+++|||+||++++||++|||+++++++|.+|+
T Consensus 241 ~~~~~~-~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~eia 319 (428)
T 3dva_I 241 KFKAIA-AEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHADRKPIFALA 319 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhhhH-hhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccCCCCCHHHHH
Confidence 998653 356899999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCCCcccccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecc
Q 036766 362 KEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDH 441 (470)
Q Consensus 362 ~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~~~tpii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DH 441 (470)
++++++++++|+|+|.++|++||||||||+||+|+++|+||||+||++||++|++.++|++.+|++.+|++|||||+|||
T Consensus 320 ~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~~g~i~~r~~m~lsls~DH 399 (428)
T 3dva_I 320 QEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSFDH 399 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccceEeecCCCCceEEEccccEEEEEEECCEEEEeeeEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChHHHHHHHHHHHHHhhCHhhhhccC
Q 036766 442 RLIDGREAVFFLRRIKDVVEEPRRLLLDI 470 (470)
Q Consensus 442 RviDG~~aa~Fl~~l~~~Le~P~~lll~~ 470 (470)
|+|||+|+++||++|+++||||+.|||+.
T Consensus 400 RviDG~~aa~Fl~~lk~~Le~P~~lll~~ 428 (428)
T 3dva_I 400 RMIDGATAQKALNHIKRLLSDPELLLMEA 428 (428)
T ss_dssp -----------------------------
T ss_pred cccchHHHHHHHHHHHHHHhCHHHHhhcC
Confidence 99999999999999999999999999873
No 2
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=5.7e-64 Score=485.66 Aligned_cols=230 Identities=60% Similarity=1.029 Sum_probs=223.5
Q ss_pred cceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceE
Q 036766 241 ERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAV 320 (470)
Q Consensus 241 ~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~ 320 (470)
++++|++++||+||++|.+|++++|||+++.++|+|+|+++|+++|+.+.++.|.++||+++++||+++||++||+||++
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 83 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEE
Confidence 45689999999999999999999999999999999999999999988766677899999999999999999999999999
Q ss_pred EeCCeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCCCcc
Q 036766 321 IDGDDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLST 400 (470)
Q Consensus 321 i~~~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~~~t 400 (470)
|+++++++++++|||+||++++||++|||+++++++|.+|+++++++++++|+|+|+++|++||||||||+||+|+.+|+
T Consensus 84 ~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~G~~~~t 163 (233)
T 1scz_A 84 IDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMST 163 (233)
T ss_dssp EETTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGTCCCCC
T ss_pred EeCCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCCCCccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhccC
Q 036766 401 PIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 470 (470)
Q Consensus 401 pii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll~~ 470 (470)
|||||||+|||++|++.++|++.+|+++++++|||||+||||+|||+++|+||++|+++||+|+.||+++
T Consensus 164 pIin~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~~~ 233 (233)
T 1scz_A 164 PIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV 233 (233)
T ss_dssp CCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHHTC
T ss_pred cccCCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998864
No 3
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=5.7e-64 Score=490.90 Aligned_cols=231 Identities=37% Similarity=0.575 Sum_probs=224.2
Q ss_pred CCccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCcc
Q 036766 238 KERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPII 317 (470)
Q Consensus 238 ~~~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~l 317 (470)
...++++|++++||+||++|.+|++++||||++.+||+|+|+++|+++|+.+.++.|.++||+++++||+++||++||+|
T Consensus 15 ~~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~ 94 (256)
T 3mae_A 15 AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQL 94 (256)
T ss_dssp CCSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTT
T ss_pred CCCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHh
Confidence 45578899999999999999999999999999999999999999999998777777899999999999999999999999
Q ss_pred ceEEeCCeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCC
Q 036766 318 NAVIDGDDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSL 397 (470)
Q Consensus 318 N~~i~~~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~ 397 (470)
|++|+++++++++++|||+||++++||++|||+++++++|.||+++++++++++|+|+|.++|++||||||||+||+|++
T Consensus 95 Na~~~~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~ 174 (256)
T 3mae_A 95 NSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSV 174 (256)
T ss_dssp SEEEETTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGGGTCS
T ss_pred hhEEecCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhc
Q 036766 398 LSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLL 468 (470)
Q Consensus 398 ~~tpii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll 468 (470)
+|+|||||||++||++|++.++|++.+|++++|++|+|||+||||+|||+++|+||++|+++||+|+.|..
T Consensus 175 ~ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~~~~ 245 (256)
T 3mae_A 175 QSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENT 245 (256)
T ss_dssp EEECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTTC
T ss_pred ceEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHHhChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997754
No 4
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=1.9e-62 Score=478.57 Aligned_cols=224 Identities=29% Similarity=0.529 Sum_probs=215.7
Q ss_pred ccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccce
Q 036766 240 RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINA 319 (470)
Q Consensus 240 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~ 319 (470)
.+++ |++++||+||++|.+|++++||||++.+||||+|+++|+++|+ .|.|+||+++++||+++||++||+||+
T Consensus 14 ~~~r-pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~-----~~~kls~~~~iikAva~AL~~~P~~Na 87 (250)
T 3l60_A 14 PDVR-PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVILNS 87 (250)
T ss_dssp CCCC-CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGGGSE
T ss_pred CCCC-CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHHhhE
Confidence 3455 9999999999999999999999999999999999999998853 478999999999999999999999999
Q ss_pred EEeC----CeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCC
Q 036766 320 VIDG----DDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYG 395 (470)
Q Consensus 320 ~i~~----~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G 395 (470)
+|++ ++|++++++|||+||++++||++|||+++++++|.||+++++++++++|+|+|+++|++||||||||+||+|
T Consensus 88 ~~~~~~~~~~i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G 167 (250)
T 3l60_A 88 TWVDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALG 167 (250)
T ss_dssp EEECTTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGGGT
T ss_pred EEeccCCCCeEEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCCCC
Confidence 9975 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhcc
Q 036766 396 SLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLD 469 (470)
Q Consensus 396 ~~~~tpii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll~ 469 (470)
+++|+|||||||++||++|++.++|++.+|++++|++|+|||+||||+|||+++|+||++|+++||+|+.|+.+
T Consensus 168 ~~~ftpIinppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~~~ 241 (250)
T 3l60_A 168 VDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALLD 241 (250)
T ss_dssp CSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHTTT
T ss_pred cceeEeeeCCCCceEEEecceEEEeEEECCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988765
No 5
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=5.6e-62 Score=474.48 Aligned_cols=228 Identities=36% Similarity=0.540 Sum_probs=219.0
Q ss_pred ccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccce
Q 036766 240 RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINA 319 (470)
Q Consensus 240 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~ 319 (470)
..+++|++++||.||++|.+|++++|||+++.++|+|+|+++|+++|+.+. +.|.++||+++++||+++||++||+||+
T Consensus 14 ~~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~-~~g~kls~~~~~ikA~~~Al~~~P~~Na 92 (243)
T 1dpb_A 14 EIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAE-KAGVKLTVLPLLLKACAYLLKELPDFNS 92 (243)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHH-HTTCCCCSHHHHHHHHHHHHHHSGGGGE
T ss_pred CceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhh-hccCCCChHHHHHHHHHHHHHhChHhhE
Confidence 346789999999999999999999999999999999999999999886543 4688999999999999999999999999
Q ss_pred EEeC--CeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCC
Q 036766 320 VIDG--DDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSL 397 (470)
Q Consensus 320 ~i~~--~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~ 397 (470)
+|++ +++++++++|||+||++++||++|||+++++++|.+|+++++++++++|+|+|.++|++||||||||+||+|++
T Consensus 93 ~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~ 172 (243)
T 1dpb_A 93 SLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGT 172 (243)
T ss_dssp EECTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTTTCCS
T ss_pred EEecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCcc
Confidence 9986 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhc
Q 036766 398 LSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLL 468 (470)
Q Consensus 398 ~~tpii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll 468 (470)
+|+|||||||+|||++|+++++|++.||+++++++|||||+||||+|||+++|+||++|+++||+|+.||+
T Consensus 173 ~~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 243 (243)
T 1dpb_A 173 AFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL 243 (243)
T ss_dssp CCCCCCCTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred ceECccCCCCCeEEEccccEEEEEEECCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHHhhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998875
No 6
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=2.3e-61 Score=474.38 Aligned_cols=230 Identities=34% Similarity=0.556 Sum_probs=219.0
Q ss_pred CccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccc
Q 036766 239 ERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIIN 318 (470)
Q Consensus 239 ~~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN 318 (470)
..++++||+++||+||++|.+|+ ++|||+++.++|||+|+++|+++|+. .++.|.++||+++++||+++||++||+||
T Consensus 29 ~~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~r~~~k~~-~~~~g~kls~~~~~ikAva~Al~~~P~~N 106 (262)
T 2ii3_A 29 GKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPI-AFARGIKLSFMPFFLKAASLGLLQFPILN 106 (262)
T ss_dssp CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHH-HHHTTCCCCSHHHHHHHHHHHHHHCGGGS
T ss_pred CCcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHHHHHHhhh-hhhccCCccHHHHHHHHHHHHHHhChHhh
Confidence 34678999999999999999997 69999999999999999999999864 34568999999999999999999999999
Q ss_pred eEEeC--CeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCC
Q 036766 319 AVIDG--DDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGS 396 (470)
Q Consensus 319 ~~i~~--~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~ 396 (470)
++|++ +++++++++|||+||++++||++|||+++++++|.+|+++++++++++|+|+|.++|++||||||||+||+|+
T Consensus 107 a~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~~G~ 186 (262)
T 2ii3_A 107 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGG 186 (262)
T ss_dssp EEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCC
T ss_pred EEEeCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCCCCc
Confidence 99985 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCceeEEEEecceeEEEEe-CCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhccC
Q 036766 397 LLSTPIINPPQSAILGMHSIVQRPMVV-GGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 470 (470)
Q Consensus 397 ~~~tpii~~p~~aIl~vG~i~~~Pvv~-~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll~~ 470 (470)
++|+|||||||+|||++|++.++|++. ||++++|++|+|||+||||+|||+++|+||++|+++||+|+.||+++
T Consensus 187 ~~~tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll~~~ 261 (262)
T 2ii3_A 187 TYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDL 261 (262)
T ss_dssp SCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHHHC
T ss_pred cceECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhCHHHHHhhc
Confidence 999999999999999999999999997 78999999999999999999999999999999999999999988763
No 7
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.2e-61 Score=461.78 Aligned_cols=218 Identities=35% Similarity=0.594 Sum_probs=208.6
Q ss_pred ccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccce
Q 036766 240 RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINA 319 (470)
Q Consensus 240 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~ 319 (470)
.++++|++++||+||++|.+|++++|||+++.++|+|+|+++|+++|+ .|.|+||+++++||+++||++||+||+
T Consensus 5 ~~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~-----~g~kls~~~~~ikA~~~Al~~~P~~N~ 79 (224)
T 3rqc_A 5 REEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKA-----RNRKVTVTGFLARIVPSILKQYPYLNA 79 (224)
T ss_dssp -CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTT-----TTCCCCHHHHHHHHHHHHHHHSGGGSB
T ss_pred CceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHHhhe
Confidence 457899999999999999999999999999999999999999999864 278999999999999999999999999
Q ss_pred EEeCC--eEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCC
Q 036766 320 VIDGD--DIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSL 397 (470)
Q Consensus 320 ~i~~~--~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~ 397 (470)
+|+++ ++++++++|||+||++++||++|||+++++++|.||+++++++++++|+|+|.++|++||||||||+||+|++
T Consensus 80 ~~~~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~~G~~ 159 (224)
T 3rqc_A 80 IYDETRRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGTIGGI 159 (224)
T ss_dssp BCCSSTTCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTTTCCS
T ss_pred EEeCCCCEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCcCCcc
Confidence 99877 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhccC
Q 036766 398 LSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 470 (470)
Q Consensus 398 ~~tpii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll~~ 470 (470)
+|+|||||||++||++|++.++|+ |++|||||+||||+|||+++|+||++|+++||+|+.||+++
T Consensus 160 ~~tpiin~pq~aIl~vG~~~~~p~--------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~~~ 224 (224)
T 3rqc_A 160 MSTPIINYPEVAILGVHRILEREG--------RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIYEI 224 (224)
T ss_dssp EEECCCCTTBSEEEEECCCEEETT--------EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTTC--
T ss_pred ceEeccCCCCceEEEecccEEECC--------ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHhhcC
Confidence 999999999999999999999875 89999999999999999999999999999999999999874
No 8
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-61 Score=468.99 Aligned_cols=227 Identities=28% Similarity=0.435 Sum_probs=217.2
Q ss_pred ccceeechhhHHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccce
Q 036766 240 RERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINA 319 (470)
Q Consensus 240 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~ 319 (470)
..+++|++++||+||++|.+|++++|||+++.++|+|+|+++|+++|+.+.+ +.++||+++++||+++||++||+||+
T Consensus 11 ~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~--~~kls~~~~~ikAv~~Al~~~P~~Na 88 (239)
T 3b8k_A 11 VFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEG--RSKISVNDFIIKASALACLKVPEANS 88 (239)
T ss_dssp SCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTT--SSCCCHHHHHHHHHHHHHHHCCCSCT
T ss_pred CceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHhChHhhE
Confidence 3567899999999999999999999999999999999999999998865322 35999999999999999999999999
Q ss_pred EEeCCeEEEeecccEEEEEecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCCCc
Q 036766 320 VIDGDDIIYRDYIDISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLS 399 (470)
Q Consensus 320 ~i~~~~i~~~~~i~igiAV~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~~~ 399 (470)
+|+++++++++++|||+||++++||++|||+++++++|.+|+++++++++++|+|+|.++|++||||||||+||+|+++|
T Consensus 89 ~~~~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~f 168 (239)
T 3b8k_A 89 SWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNF 168 (239)
T ss_dssp TSCCCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCSSCCSSC
T ss_pred EEECCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceeEEEEecceeEEEE--eCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhhhc
Q 036766 400 TPIINPPQSAILGMHSIVQRPMV--VGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLL 468 (470)
Q Consensus 400 tpii~~p~~aIl~vG~i~~~Pvv--~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~lll 468 (470)
+||+||||++||++|+++++|++ .+|++++|++|||||+||||+|||+++|+||++|+++||+|+.||+
T Consensus 169 tpiin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 239 (239)
T 3b8k_A 169 SAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 239 (239)
T ss_dssp CCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred ECcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHhhhC
Confidence 99999999999999999999999 4889999999999999999999999999999999999999998875
No 9
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.4e-47 Score=438.54 Aligned_cols=210 Identities=21% Similarity=0.355 Sum_probs=178.4
Q ss_pred HHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEeCC----eEEEeec
Q 036766 256 RLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVIDGD----DIIYRDY 331 (470)
Q Consensus 256 ~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~~~----~i~~~~~ 331 (470)
+|.+|+ ++||||++.+||||+|+++|+++|+.+.++.|.|+||++|++||+++||++||+||++|+++ +|+++++
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~ 79 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAH 79 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSS
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCc
Confidence 588895 79999999999999999999999987766778999999999999999999999999999853 7999999
Q ss_pred ccEEEEEecC--CC---eEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCCCcCCCCeEEEEeCCCCCCCCcccccCCC
Q 036766 332 IDISIAVGTS--KG---LVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPP 406 (470)
Q Consensus 332 i~igiAV~~~--~G---L~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g~l~~~d~~ggtftISnlG~~G~~~~tpii~~p 406 (470)
||||+||+++ +| |++|||+|+++++|.+|++++++++++||+|+|+++|++||||||||+||+|+.+|+||||||
T Consensus 80 vnigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~~G~~~~tPIinpp 159 (1113)
T 2xt6_A 80 TNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTLGTVHSVPRLMQG 159 (1113)
T ss_dssp CCEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC------------CTT
T ss_pred ccEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCcCCCcceECCCCCC
Confidence 9999999997 67 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEecceeEEEEeC------CeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCHhhh
Q 036766 407 QSAILGMHSIVQRPMVVG------GNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRL 466 (470)
Q Consensus 407 ~~aIl~vG~i~~~Pvv~~------G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P~~l 466 (470)
|+|||++|++.++|++.+ |+++++++|+|||+||||||||+++|+||++|+++||+|+.|
T Consensus 160 q~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~w 225 (1113)
T 2xt6_A 160 QGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFF 225 (1113)
T ss_dssp CSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999998866 689999999999999999999999999999999999999865
No 10
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=2.5e-44 Score=345.00 Aligned_cols=192 Identities=11% Similarity=0.125 Sum_probs=169.5
Q ss_pred HHHHHHHHHhcccCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEeCCeEEEe
Q 036766 250 RKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYR 329 (470)
Q Consensus 250 Rk~ia~~m~~S~~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~ 329 (470)
||.--+.. ...++|||+++.++|||+|+++|++. ++||+++++||+++||++||+||++|++++++++
T Consensus 18 R~~~f~~f--~~~~~P~~t~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~ 85 (219)
T 1q23_A 18 RKEHFEAF--QSVAQCTYNQTVQLDITAFLKTVKKN----------KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIW 85 (219)
T ss_dssp THHHHHHH--TTTTCEEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEE
T ss_pred CHHHHHHh--cCCCCcEEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEe
Confidence 44444443 33679999999999999999998652 7899999999999999999999999999999999
Q ss_pred ecccEEEEE-ecCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CcCCCCeEEEEeCCCCCCCCcccccCCC
Q 036766 330 DYIDISIAV-GTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDG-SISI-DEMAGGSFTISNGGVYGSLLSTPIINPP 406 (470)
Q Consensus 330 ~~i~igiAV-~~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g-~l~~-~d~~ggtftISnlG~~G~~~~tpii~~p 406 (470)
+++|||+|| ++++||++||+.. +.+++.+|++++++++++||+| +|++ +|+ ||||||||+||+|.+.+.+.+++|
T Consensus 86 ~~v~igiAV~~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~~~ft~i~~~~~~~ 163 (219)
T 1q23_A 86 DSVHPCYTVFHEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPWVSFTSFDLNVANM 163 (219)
T ss_dssp SCCEEEEEEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTTCCCSEEEEEESCC
T ss_pred cccCeEEEEEecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCccccccccccCCCCC
Confidence 999999999 9999999999986 5689999999999999999998 6976 889 999999999998766555554433
Q ss_pred -c--eeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhCH
Q 036766 407 -Q--SAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEP 463 (470)
Q Consensus 407 -~--~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~P 463 (470)
+ ++||++|++.++ +| +++|||||+||||+|||+++|+||++|+++||+|
T Consensus 164 ~~~~~pIi~~G~~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~ 215 (219)
T 1q23_A 164 DNFFAPVFTMGKYYTQ----GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEW 215 (219)
T ss_dssp TTCCSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ccceeEEEecccEEEE----CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCc
Confidence 2 699999999876 44 7899999999999999999999999999999985
No 11
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=9e-44 Score=339.86 Aligned_cols=182 Identities=12% Similarity=0.128 Sum_probs=166.2
Q ss_pred cCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEeCCeEEEeecccEEEEE-ec
Q 036766 262 NTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAV-GT 340 (470)
Q Consensus 262 ~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~~~i~igiAV-~~ 340 (470)
.++|||+++.++|||+|+++|++. ++||+++++||+++||++||+||++|+++++++++++|||+|| ++
T Consensus 23 ~~~P~~~~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 23 RLPCGFSLTSKIDITTLKKSLDDS----------AYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp TSCCEEEEEEEEECHHHHHHHHTS----------SCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred CCCceEEEEEEEEHHHHHHHHHHh----------CCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 568999999999999999998642 8999999999999999999999999999999999999999999 99
Q ss_pred CCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CcCCCCeEEEEeCCCCCCCCcccccCCC---ceeEEEEec
Q 036766 341 SKGLVVPVIRNADKMNFADIEKEINTLAKKANDG-SISI-DEMAGGSFTISNGGVYGSLLSTPIINPP---QSAILGMHS 415 (470)
Q Consensus 341 ~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~g-~l~~-~d~~ggtftISnlG~~G~~~~tpii~~p---~~aIl~vG~ 415 (470)
++||++||+.+ +.+++.+|++++.+++++||+| +|++ +|++||||||||+||++.+.++...+++ ..+|+++|+
T Consensus 93 ~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~~~ft~i~~~~~~g~~~~~PIi~~G~ 171 (213)
T 3cla_A 93 ETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAK 171 (213)
T ss_dssp TTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCCCSCCCCCCSCCTTCCSCEEEEEC
T ss_pred CCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCCCCcccccccCCCCCcccccEEEeeE
Confidence 99999999987 5689999999999999999996 9988 7899999999999998877764444433 358999999
Q ss_pred ceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHhhC
Q 036766 416 IVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEE 462 (470)
Q Consensus 416 i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le~ 462 (470)
+.++ +| +++|||||+||||+|||+++|+||++|+++||+
T Consensus 172 ~~~~----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 172 YQQE----GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp CEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred EEEE----CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 9875 44 789999999999999999999999999999998
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6e-42 Score=327.82 Aligned_cols=180 Identities=17% Similarity=0.190 Sum_probs=164.1
Q ss_pred cCcceEEEEeeeechHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEe-CCeEEEeecccEEEEE-e
Q 036766 262 NTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVID-GDDIIYRDYIDISIAV-G 339 (470)
Q Consensus 262 ~~iP~~~~~~evDvt~L~~~rk~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~-~~~i~~~~~i~igiAV-~ 339 (470)
.++|||+++.++|||+|+++||+. ++||+++++||+++||++||+||++|+ ++++++++++|||+|| +
T Consensus 25 ~~~P~~~~~~evDvt~l~~~rk~~----------~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~ 94 (217)
T 2i9d_A 25 FQNPQLSITSEVECGGARQRAKAA----------GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKI 94 (217)
T ss_dssp CSBCEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEEC
T ss_pred CCCceEEEEEEEEhHHHHHHHHHc----------CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEe
Confidence 578999999999999999998753 899999999999999999999999999 8999999999999999 9
Q ss_pred cCCCeEEEEEEeCCCCCHHHHHHHHHHHHHHHhc-CCCCCC------cCCCCeEEEEeCCCCCCCCcccccCCC---cee
Q 036766 340 TSKGLVVPVIRNADKMNFADIEKEINTLAKKAND-GSISID------EMAGGSFTISNGGVYGSLLSTPIINPP---QSA 409 (470)
Q Consensus 340 ~~~GL~vpvI~~a~~~sl~ei~~~i~~l~~~ar~-g~l~~~------d~~ggtftISnlG~~G~~~~tpii~~p---~~a 409 (470)
+++||++|++. ++.+++.+|++++++++++||+ |+|+++ |++||||||||+||++.+.++...+++ ..+
T Consensus 95 t~~GL~~pv~~-~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~~~ft~i~~~~~~g~~~~~P 173 (217)
T 2i9d_A 95 KENGKFFTTRF-PYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGTQEKRSGNNYP 173 (217)
T ss_dssp STTSCEEEEEE-CCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEECCCBCSTTCCSSC
T ss_pred cCCceEeEEEe-cCCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCccccceeecCCCCCccceEE
Confidence 99999999986 5678999999999999999999 599995 999999999999999877775555444 358
Q ss_pred EEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHh
Q 036766 410 ILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVV 460 (470)
Q Consensus 410 Il~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~L 460 (470)
|+++|++.++ +| |++|||||+||||+|||+++|+||++|+++|
T Consensus 174 Ii~~Gk~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 174 LLNAGKAIIR----EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEecceEEEE----CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 9999999875 44 7899999999999999999999999999987
No 13
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=9.9e-19 Score=146.69 Aligned_cols=85 Identities=26% Similarity=0.573 Sum_probs=79.7
Q ss_pred CCCceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCcc-CCCCeEEEE
Q 036766 94 EGGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETV-EPGTKIAVI 172 (470)
Q Consensus 94 ~~~~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v-~~G~~l~~i 172 (470)
...+.++++||++|++|.+|+|.+|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+.| .+|++|+.|
T Consensus 3 ~~~~~~~i~~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i 82 (98)
T 2dnc_A 3 SGSSGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLI 82 (98)
T ss_dssp CCCCCEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEE
T ss_pred CCcccEEEECCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEE
Confidence 3456789999999999999999999999999999999999999999999999999999999999999998 999999999
Q ss_pred eeCCCC
Q 036766 173 SKSGEG 178 (470)
Q Consensus 173 ~~~~~~ 178 (470)
...+++
T Consensus 83 ~~~~~~ 88 (98)
T 2dnc_A 83 VEEGED 88 (98)
T ss_dssp ECTTSC
T ss_pred ecCCCc
Confidence 876543
No 14
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.78 E-value=1.4e-18 Score=142.43 Aligned_cols=82 Identities=26% Similarity=0.457 Sum_probs=77.8
Q ss_pred CceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCC-ccCCCCeEEEEee
Q 036766 96 GDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGE-TVEPGTKIAVISK 174 (470)
Q Consensus 96 ~~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~-~v~~G~~l~~i~~ 174 (470)
++.++++||++|+++.+|+|.+|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+ .|.+|++|+.|..
T Consensus 3 ~~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 3 PPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp CCEEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred CcceEEeCCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 456889999999999999999999999999999999999999999999999999999999999999 8999999999986
Q ss_pred CCC
Q 036766 175 SGE 177 (470)
Q Consensus 175 ~~~ 177 (470)
.++
T Consensus 83 ~~~ 85 (87)
T 3crk_C 83 KEA 85 (87)
T ss_dssp SST
T ss_pred ccC
Confidence 543
No 15
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.78 E-value=2.7e-19 Score=152.78 Aligned_cols=84 Identities=27% Similarity=0.439 Sum_probs=79.7
Q ss_pred CCCceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCC-ccCCCCeEEEE
Q 036766 94 EGGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGE-TVEPGTKIAVI 172 (470)
Q Consensus 94 ~~~~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~-~v~~G~~l~~i 172 (470)
+.++.++|+||++|++|.+|+|++|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+ .|.+|++|++|
T Consensus 3 ~~p~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i 82 (108)
T 2dne_A 3 SGSSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICIT 82 (108)
T ss_dssp CCCCCEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEE
T ss_pred CCccceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeCCC
Q 036766 173 SKSGE 177 (470)
Q Consensus 173 ~~~~~ 177 (470)
...++
T Consensus 83 ~~~~~ 87 (108)
T 2dne_A 83 VGKPE 87 (108)
T ss_dssp ESCHH
T ss_pred ecCcc
Confidence 87544
No 16
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.77 E-value=1.3e-18 Score=152.57 Aligned_cols=86 Identities=27% Similarity=0.445 Sum_probs=80.3
Q ss_pred CCCCceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCC-ccCCCCeEEE
Q 036766 93 SEGGDLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGE-TVEPGTKIAV 171 (470)
Q Consensus 93 ~~~~~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~-~v~~G~~l~~ 171 (470)
++.++.++|+||++|++|++|+|++|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+ .|.+|++|++
T Consensus 22 ~~~p~~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~ 101 (128)
T 1y8o_B 22 SSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCI 101 (128)
T ss_dssp -CCCSEEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEE
T ss_pred ccCCcceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEE
Confidence 456678999999999999999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred EeeCCCC
Q 036766 172 ISKSGEG 178 (470)
Q Consensus 172 i~~~~~~ 178 (470)
|+..+++
T Consensus 102 i~~~~~~ 108 (128)
T 1y8o_B 102 IVEKEAD 108 (128)
T ss_dssp EESSGGG
T ss_pred EecCccc
Confidence 9876543
No 17
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.75 E-value=4e-18 Score=141.61 Aligned_cols=81 Identities=23% Similarity=0.349 Sum_probs=77.1
Q ss_pred ceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 97 DLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 97 ~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.++|.||++|+++.+|+|.+|+|++||.|++||+|++||+||+..+|+||++|+|.++++++|+.|.+|++|+.|+..+
T Consensus 3 ~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~~~ 82 (93)
T 1k8m_A 3 QVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEA 82 (93)
T ss_dssp CCEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEECSC
T ss_pred cceEEEcCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEecCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred C
Q 036766 177 E 177 (470)
Q Consensus 177 ~ 177 (470)
.
T Consensus 83 ~ 83 (93)
T 1k8m_A 83 L 83 (93)
T ss_dssp C
T ss_pred C
Confidence 3
No 18
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.71 E-value=2.5e-17 Score=132.25 Aligned_cols=76 Identities=43% Similarity=0.674 Sum_probs=73.8
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEee
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~ 174 (470)
++++||++|+++.+|+|.+|++++||.|++||+|+++|+||+..+|+||++|+|.++++++|+.|..|++|+.|..
T Consensus 2 ~~i~~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred cEEECCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999864
No 19
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.68 E-value=2.9e-18 Score=164.83 Aligned_cols=80 Identities=26% Similarity=0.612 Sum_probs=0.0
Q ss_pred ceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCc-cCCCCeEEEEeeC
Q 036766 97 DLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGET-VEPGTKIAVISKS 175 (470)
Q Consensus 97 ~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~-v~~G~~l~~i~~~ 175 (470)
|.++|+||+||++|++|+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+. |.+|++|++|..+
T Consensus 2 ~~~ei~mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~ 81 (229)
T 1zy8_K 2 DPIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 81 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeEecCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEecc
Confidence 567899999999999999999999999999999999999999999999999999999999999996 9999999999764
Q ss_pred C
Q 036766 176 G 176 (470)
Q Consensus 176 ~ 176 (470)
+
T Consensus 82 ~ 82 (229)
T 1zy8_K 82 G 82 (229)
T ss_dssp -
T ss_pred C
Confidence 4
No 20
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.66 E-value=1.5e-16 Score=127.04 Aligned_cols=75 Identities=32% Similarity=0.570 Sum_probs=73.2
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
++++||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|.||++|+|.++++++|+.|..|++|+.|+
T Consensus 2 ~~i~~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 2 YEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EEEECCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred eEEECCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999986
No 21
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.66 E-value=1.9e-16 Score=127.20 Aligned_cols=78 Identities=28% Similarity=0.524 Sum_probs=74.0
Q ss_pred ceEEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 97 DLVDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 97 ~~~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
|.++++||++|++ +|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|..|++|+.|...+
T Consensus 1 m~~~i~~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 78 (80)
T 1qjo_A 1 MVKEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 78 (80)
T ss_dssp CEEEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESCC
T ss_pred CCeEEECCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEccC
Confidence 3468999999998 99999999999999999999999999999999999999999999999999999999999998654
No 22
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.66 E-value=4.1e-18 Score=137.32 Aligned_cols=76 Identities=37% Similarity=0.606 Sum_probs=73.4
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEee
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~ 174 (470)
.+++||++|+++.+|+|.+|++++||.|++||+|++||+||+..+|+||++|+|.++++++|+.|.+|++|+.|..
T Consensus 3 ~~i~~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 3 VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred cEEEcCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999998864
No 23
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.61 E-value=1.9e-15 Score=121.21 Aligned_cols=75 Identities=27% Similarity=0.490 Sum_probs=71.3
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
++++||++|++ + +|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|..|++|+.|...+
T Consensus 2 ~~i~~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~~ 76 (79)
T 1iyu_A 2 EIIRVPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPAA 76 (79)
T ss_dssp EEEECCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECCC
T ss_pred cEEECCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecCC
Confidence 47899999996 7 999999999999999999999999999999999999999999999999999999999998654
No 24
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.58 E-value=7.8e-16 Score=124.02 Aligned_cols=76 Identities=32% Similarity=0.510 Sum_probs=72.7
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
++++||++| ++..|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++++++|+.|..|++|+.|...
T Consensus 3 ~~i~~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 3 VELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp EECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred EEEEcCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 578999999 6899999999999999999999999999999999999999999999999999999999999999754
No 25
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.48 E-value=4.1e-15 Score=121.10 Aligned_cols=72 Identities=29% Similarity=0.531 Sum_probs=68.3
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
++|++|.+ |+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...+
T Consensus 3 ~~i~~p~~------G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~~ 74 (85)
T 2k7v_A 3 KEVNVPDI------VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 74 (85)
T ss_dssp SCCCCCSC------CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECCS
T ss_pred cEEECCCe------EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcCC
Confidence 46788988 8999999999999999999999999999999999999999999999999999999999998754
No 26
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.37 E-value=1.5e-12 Score=101.99 Aligned_cols=65 Identities=31% Similarity=0.490 Sum_probs=62.1
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+.|..|++|+.|...
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 70 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSNS 70 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999999999999999999998653
No 27
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.36 E-value=7e-13 Score=107.71 Aligned_cols=66 Identities=23% Similarity=0.382 Sum_probs=62.6
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
..|+|.+|++++||.|++||+|++||+||+..+|.||.+|+|.++. ++|+.|.+|++|+.|...+.
T Consensus 12 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~~ 77 (84)
T 2kcc_A 12 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDDL 77 (84)
T ss_dssp SSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSCS
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCCh
Confidence 5699999999999999999999999999999999999999999999 99999999999999986554
No 28
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.31 E-value=5.3e-13 Score=110.75 Aligned_cols=77 Identities=22% Similarity=0.332 Sum_probs=29.2
Q ss_pred ceEEEEccCCCCCC----ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEE
Q 036766 97 DLVDAVVPFMGESI----TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVI 172 (470)
Q Consensus 97 ~~~~v~~P~lg~~~----~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i 172 (470)
...+|.+|..++.. ..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++.+++|+.|..|++|+.|
T Consensus 14 ~~~~v~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i 93 (94)
T 2jku_A 14 GTENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVEL 93 (94)
T ss_dssp ----------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC-----------------------------------
T ss_pred cCEEEEcCCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEE
Confidence 44678999998864 59999999999999999999999999999999999999999999999999999999999987
Q ss_pred e
Q 036766 173 S 173 (470)
Q Consensus 173 ~ 173 (470)
+
T Consensus 94 e 94 (94)
T 2jku_A 94 E 94 (94)
T ss_dssp -
T ss_pred C
Confidence 4
No 29
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=4.6e-12 Score=106.20 Aligned_cols=66 Identities=23% Similarity=0.415 Sum_probs=62.3
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
..|+|.+|++++||.|++||+|+++|+||+..+|+||.+|+|. +++++|+.|..|++|+.|...+.
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~~~~ 89 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLELDDP 89 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECCSCS
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEcCCc
Confidence 5699999999999999999999999999999999999999999 99999999999999999976543
No 30
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.26 E-value=1.6e-11 Score=96.33 Aligned_cols=63 Identities=30% Similarity=0.565 Sum_probs=60.5
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
..|+|.+|++++||.|++||+|+++|++|+..++.||.+|+|.++.+++|+.|..|++|+.|+
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 469999999999999999999999999999999999999999999999999999999999874
No 31
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.24 E-value=1.9e-11 Score=102.32 Aligned_cols=67 Identities=21% Similarity=0.394 Sum_probs=63.7
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
..|+|.+|++++||.|++||+|++||++|+..+|.||++|+|.++.+++|+.|..|++|+.|...+.
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~~ 87 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEES 87 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCCS
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCCc
Confidence 4699999999999999999999999999999999999999999999999999999999999986554
No 32
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.24 E-value=1.9e-11 Score=96.94 Aligned_cols=63 Identities=25% Similarity=0.482 Sum_probs=60.5
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
..|+|.+|++++||.|++||+|++++++|+..+|.||.+|+|.++.+++|+.|..|++|+.|+
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 468999999999999999999999999999999999999999999999999999999999874
No 33
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.22 E-value=1.6e-11 Score=98.38 Aligned_cols=62 Identities=21% Similarity=0.416 Sum_probs=57.8
Q ss_pred eEEEEE-------EEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 112 DGTLAK-------FLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 112 eg~I~~-------w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
.|+|.+ |++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|+
T Consensus 12 ~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 12 VGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp SEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 366665 69999999999999999999999999999999999999999999999999999874
No 34
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.13 E-value=6.6e-11 Score=130.43 Aligned_cols=63 Identities=19% Similarity=0.268 Sum_probs=60.9
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
..|+|++|+|++||+|++||+|++||+|||+++|+||.+|+|.++++++|+.|.+|++|+.|+
T Consensus 619 ~~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 619 MPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CcEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 459999999999999999999999999999999999999999999999999999999999984
No 35
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.06 E-value=1.7e-10 Score=134.01 Aligned_cols=61 Identities=31% Similarity=0.478 Sum_probs=59.9
Q ss_pred eEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEE
Q 036766 112 DGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVI 172 (470)
Q Consensus 112 eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i 172 (470)
.|+|.+|+|++||+|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 4999999999999999999999999999999999999999999999999999999999987
No 36
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.04 E-value=2.2e-11 Score=134.13 Aligned_cols=65 Identities=32% Similarity=0.585 Sum_probs=0.0
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|.+|++|+.|+.+
T Consensus 609 ~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 609 MNGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp -----------------------------------------------------------------
T ss_pred CCEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 46999999999999999999999999999999999999999999999999999999999999754
No 37
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.03 E-value=2.4e-10 Score=132.26 Aligned_cols=65 Identities=25% Similarity=0.471 Sum_probs=61.4
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+.+
T Consensus 1084 ~~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1084 MPGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred ceEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 35999999999999999999999999999999999999999999999999999999999999754
No 38
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.79 E-value=5.3e-09 Score=89.40 Aligned_cols=67 Identities=21% Similarity=0.390 Sum_probs=61.4
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeee-----------------------------eEecCCCeEEEEEeecCCC
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTI-----------------------------DVASPEAGVIKELVAKEGE 161 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~-----------------------------~i~ap~~G~l~~i~v~eG~ 161 (470)
..|+|.+|+|++||.|++||+|+++++.++.. .|.||.+|+|.++.+++|+
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~ 87 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGD 87 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTC
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCC
Confidence 46999999999999999999999999986654 8999999999999999999
Q ss_pred ccCCC-CeEEEEeeCCC
Q 036766 162 TVEPG-TKIAVISKSGE 177 (470)
Q Consensus 162 ~v~~G-~~l~~i~~~~~ 177 (470)
.|..| ++|+.|.+.+.
T Consensus 88 ~v~~g~~~l~~i~~~~~ 104 (116)
T 2k32_A 88 YVSASTTELVRVTNLNP 104 (116)
T ss_dssp EECTTTSCCEEEECSCT
T ss_pred EEcCCCcEEEEEECCCe
Confidence 99999 99999987654
No 39
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.77 E-value=1.6e-09 Score=119.26 Aligned_cols=62 Identities=21% Similarity=0.315 Sum_probs=60.0
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEE
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVI 172 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i 172 (470)
..|+|++|+|++||.|++||+|++||+||+..+|.||.+|+|.++.+++|+.|..|++|+.|
T Consensus 656 ~~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i 717 (718)
T 3bg3_A 656 MPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEI 717 (718)
T ss_dssp SCEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECB
T ss_pred CCeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEe
Confidence 36999999999999999999999999999999999999999999999999999999999876
No 40
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.76 E-value=1.1e-08 Score=90.36 Aligned_cols=71 Identities=27% Similarity=0.318 Sum_probs=60.3
Q ss_pred EEccCCCCCCceEEEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEE---eecCCCccC---CCC-eEEEE
Q 036766 101 AVVPFMGESITDGTLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKEL---VAKEGETVE---PGT-KIAVI 172 (470)
Q Consensus 101 v~~P~lg~~~~eg~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i---~v~eG~~v~---~G~-~l~~i 172 (470)
+..|.+|+ |+.+.+ ++||.|++||+||+||+||+..+|.||.+|+|.++ ++++|+.|. .|+ .|+.|
T Consensus 39 ~a~~~lG~------i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i 112 (136)
T 1zko_A 39 HAQEQLGD------VVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKM 112 (136)
T ss_dssp HHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEE
T ss_pred hhcccCCC------cEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEE
Confidence 34566654 444444 99999999999999999999999999999999999 888999998 898 99999
Q ss_pred eeCCC
Q 036766 173 SKSGE 177 (470)
Q Consensus 173 ~~~~~ 177 (470)
...+.
T Consensus 113 ~~~~~ 117 (136)
T 1zko_A 113 EISDE 117 (136)
T ss_dssp EESCG
T ss_pred EECCH
Confidence 86653
No 41
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.71 E-value=5.8e-09 Score=121.04 Aligned_cols=63 Identities=21% Similarity=0.431 Sum_probs=54.3
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEe
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~ 173 (470)
..|+|++|+|++||.|++||+|++||+||++.+|+||.+|+|.++.+++|+.|..|++|+.|+
T Consensus 1102 ~~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1102 MPGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp SCEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CCeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 359999999999999999999999999999999999999999999999999999999999875
No 42
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.30 E-value=9.4e-07 Score=77.12 Aligned_cols=70 Identities=26% Similarity=0.253 Sum_probs=55.8
Q ss_pred EccCCCCCCceEEEEEEE-eCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeec---CCCcc---CCCC-eEEEEe
Q 036766 102 VVPFMGESITDGTLAKFL-KGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAK---EGETV---EPGT-KIAVIS 173 (470)
Q Consensus 102 ~~P~lg~~~~eg~I~~w~-v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~---eG~~v---~~G~-~l~~i~ 173 (470)
..|.+|+ |+.+. .++||+|++||++|+||++|+..+|.||.+|+|.+++.+ ..+.| +-|+ -|+.|.
T Consensus 31 a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~ 104 (128)
T 1onl_A 31 AQDALGD------VVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLK 104 (128)
T ss_dssp HHHHHCS------EEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEE
T ss_pred HhhcCCC------ceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEE
Confidence 4455554 44444 499999999999999999999999999999999999744 55566 6777 888888
Q ss_pred eCCC
Q 036766 174 KSGE 177 (470)
Q Consensus 174 ~~~~ 177 (470)
..+.
T Consensus 105 ~~~~ 108 (128)
T 1onl_A 105 PRDM 108 (128)
T ss_dssp ESCG
T ss_pred ECCH
Confidence 6553
No 43
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.23 E-value=5.9e-07 Score=78.72 Aligned_cols=63 Identities=21% Similarity=0.185 Sum_probs=52.0
Q ss_pred EEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCC---Ccc---CCCC-eEEEEeeCC
Q 036766 114 TLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEG---ETV---EPGT-KIAVISKSG 176 (470)
Q Consensus 114 ~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG---~~v---~~G~-~l~~i~~~~ 176 (470)
.|+.+.+ ++||+|++||++++||+||+..+|.||.+|+|.+++.+.+ +.| +-|+ -|+.|...+
T Consensus 37 ~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~~~ 107 (131)
T 1hpc_A 37 EVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTS 107 (131)
T ss_dssp SEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEESS
T ss_pred CceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEEEECC
Confidence 3555555 9999999999999999999999999999999999975544 455 3566 888888655
No 44
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.19 E-value=1.6e-06 Score=75.70 Aligned_cols=70 Identities=21% Similarity=0.184 Sum_probs=55.1
Q ss_pred EEccCCCCCCceEEEEEEE-eCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecC---CCccC---CCC-eEEEE
Q 036766 101 AVVPFMGESITDGTLAKFL-KGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKE---GETVE---PGT-KIAVI 172 (470)
Q Consensus 101 v~~P~lg~~~~eg~I~~w~-v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~e---G~~v~---~G~-~l~~i 172 (470)
+.+|.+|+ |+.+. +++||+|++||++|+||++|+..+|.||.+|+|.+++.+. .+.|. -|+ -|+.|
T Consensus 31 ~a~~~lG~------i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i 104 (128)
T 3a7l_A 31 HAQELLGD------MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKI 104 (128)
T ss_dssp HHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEE
T ss_pred HHhccCCc------eEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEE
Confidence 34565654 44444 4999999999999999999999999999999999997544 44454 666 88888
Q ss_pred eeCC
Q 036766 173 SKSG 176 (470)
Q Consensus 173 ~~~~ 176 (470)
...+
T Consensus 105 ~~~~ 108 (128)
T 3a7l_A 105 KASD 108 (128)
T ss_dssp EESC
T ss_pred EECC
Confidence 7655
No 45
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.84 E-value=2.2e-05 Score=81.30 Aligned_cols=66 Identities=20% Similarity=0.363 Sum_probs=58.8
Q ss_pred ceEEEEEEEe-CCCCeeeCCCcEEEEEcC------------------------------------------------Cee
Q 036766 111 TDGTLAKFLK-GPGDRVELDEPIAQIETD------------------------------------------------KVT 141 (470)
Q Consensus 111 ~eg~I~~w~v-~~Gd~V~~gd~l~evetd------------------------------------------------K~~ 141 (470)
..|.|.+++| ++||.|++||+|+++++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 4699999998 999999999999999952 234
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||++|+|.++.+++|+.|..|++|+.|...+
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~~~ 242 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMD 242 (413)
T ss_dssp EEEECSSSEEEEECCCCTTCEECTTSCSEEEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCCEECCCCcEEEEeCCC
Confidence 67999999999999999999999999999997544
No 46
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.82 E-value=6.6e-06 Score=80.10 Aligned_cols=67 Identities=25% Similarity=0.326 Sum_probs=58.4
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCC---------------------------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDK--------------------------------------------------- 139 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK--------------------------------------------------- 139 (470)
..|+|.+++|++||.|++||+|+++++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 45999999999999999999999998741
Q ss_pred --------------------eeeeEecCCCeEEEEEeecCCCccCCC--CeEEEEeeCCC
Q 036766 140 --------------------VTIDVASPEAGVIKELVAKEGETVEPG--TKIAVISKSGE 177 (470)
Q Consensus 140 --------------------~~~~i~ap~~G~l~~i~v~eG~~v~~G--~~l~~i~~~~~ 177 (470)
....|.||++|+|..+.+++|+.|..| ++|+.|...+.
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~~~ 168 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDP 168 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecCCc
Confidence 124799999999999999999999999 58999976543
No 47
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.80 E-value=2.3e-05 Score=79.10 Aligned_cols=67 Identities=19% Similarity=0.324 Sum_probs=59.4
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCe--------------------------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKV-------------------------------------------------- 140 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~-------------------------------------------------- 140 (470)
..|+|.+++|++||.|++||+|+++++...
T Consensus 64 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a 143 (359)
T 3lnn_A 64 LAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAAS 143 (359)
T ss_dssp SCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999997532
Q ss_pred --------------------------eeeEecCCCeEEEEEeecCCCccCC-CCeEEEEeeCCC
Q 036766 141 --------------------------TIDVASPEAGVIKELVAKEGETVEP-GTKIAVISKSGE 177 (470)
Q Consensus 141 --------------------------~~~i~ap~~G~l~~i~v~eG~~v~~-G~~l~~i~~~~~ 177 (470)
...|.||++|+|.++.+++|+.|.. |++|+.|...+.
T Consensus 144 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~~~ 207 (359)
T 3lnn_A 144 ESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADLSH 207 (359)
T ss_dssp HHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECCSE
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecCCe
Confidence 2579999999999999999999999 999999986543
No 48
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.75 E-value=2.5e-05 Score=78.24 Aligned_cols=66 Identities=21% Similarity=0.403 Sum_probs=57.3
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCC---------------------------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDK--------------------------------------------------- 139 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK--------------------------------------------------- 139 (470)
..|+|.+++|++||.|++||+|+++++..
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 45999999999999999999999998741
Q ss_pred ----------------------------------eeeeEecCCCeEEEEEeecCCCccCCCCe---EEEEeeCC
Q 036766 140 ----------------------------------VTIDVASPEAGVIKELVAKEGETVEPGTK---IAVISKSG 176 (470)
Q Consensus 140 ----------------------------------~~~~i~ap~~G~l~~i~v~eG~~v~~G~~---l~~i~~~~ 176 (470)
....|.||++|+|.++.+.+|+.|..|++ |+.|.+.+
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~~ 191 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMS 191 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEecCC
Confidence 11459999999999999999999999987 88887544
No 49
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.55 E-value=0.0001 Score=63.85 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=55.8
Q ss_pred eEEEEccCCCCCCceEEEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCC---cc---CCCC-eE
Q 036766 98 LVDAVVPFMGESITDGTLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGE---TV---EPGT-KI 169 (470)
Q Consensus 98 ~~~v~~P~lg~~~~eg~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~---~v---~~G~-~l 169 (470)
...|-+-+.+.. .-|.|+.+.. ++|++|++||+++.||++|+..+|.||.+|+|.++...-.+ .+ +-|+ =|
T Consensus 18 ~~~vGITd~Aq~-~lGdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~~P~liN~dpy~~gWl 96 (125)
T 3klr_A 18 VGTVGISNFAQE-ALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAENPGLVNKSCYEDGWL 96 (125)
T ss_dssp EEEEEECHHHHH-HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTTCTTHHHHCTTTTTCC
T ss_pred EEEEeeCHHHHh-hCCCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhhChHhhcCCCCCCceE
Confidence 445555554432 2366776665 78999999999999999999999999999999998644333 22 3454 36
Q ss_pred EEEeeCC
Q 036766 170 AVISKSG 176 (470)
Q Consensus 170 ~~i~~~~ 176 (470)
+.|...+
T Consensus 97 ~ki~~~~ 103 (125)
T 3klr_A 97 IKMTFSN 103 (125)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 6666543
No 50
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.47 E-value=3.7e-05 Score=78.26 Aligned_cols=66 Identities=26% Similarity=0.349 Sum_probs=57.6
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCC---------------------------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDK--------------------------------------------------- 139 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK--------------------------------------------------- 139 (470)
..|+|.+++|++||.|++||+|++|++..
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 45999999999999999999999998642
Q ss_pred ------eeeeEecCCCeEEEEEeecCCCccCCC--CeEEEEeeCC
Q 036766 140 ------VTIDVASPEAGVIKELVAKEGETVEPG--TKIAVISKSG 176 (470)
Q Consensus 140 ------~~~~i~ap~~G~l~~i~v~eG~~v~~G--~~l~~i~~~~ 176 (470)
....|.||++|+|.++.+++|+.|..| ++|+.|...+
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~~~ 174 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLD 174 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEECCS
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEecCC
Confidence 124799999999999999999999995 8999987544
No 51
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.42 E-value=0.00018 Score=63.55 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=46.6
Q ss_pred eEEEEccCCCCCCceEEEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecC
Q 036766 98 LVDAVVPFMGESITDGTLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKE 159 (470)
Q Consensus 98 ~~~v~~P~lg~~~~eg~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~e 159 (470)
...|-+-+.+.. .-|.|+-+.. ++|++|++||+++.||++|+..+|.||.+|+|.++.-.-
T Consensus 40 ~~~VGITd~Aq~-~LGdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L 101 (143)
T 3mxu_A 40 VVTVGITDYAQE-QLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAAL 101 (143)
T ss_dssp EEEEEECHHHHH-HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred EEEEeeCHHHHh-hcCCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhh
Confidence 444555444332 2355665544 789999999999999999999999999999999986443
No 52
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.35 E-value=0.00018 Score=63.15 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=46.1
Q ss_pred ceEEEEccCCCCCCceEEEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEe
Q 036766 97 DLVDAVVPFMGESITDGTLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELV 156 (470)
Q Consensus 97 ~~~~v~~P~lg~~~~eg~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~ 156 (470)
....|-+-+.... .-|.|+-+.. ++|++|++||.++.||++|+..+|.||.+|+|.++.
T Consensus 34 ~~~~VGITd~Aq~-~lGdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN 93 (137)
T 3tzu_A 34 GPVRVGITSVAVE-ALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVN 93 (137)
T ss_dssp SCEEEEECHHHHH-HHCSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEEC
T ss_pred CEEEEeeCHHHHh-hcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEeh
Confidence 3455555554432 2355665544 789999999999999999999999999999999985
No 53
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.04 E-value=3.8e-05 Score=77.70 Aligned_cols=65 Identities=22% Similarity=0.369 Sum_probs=55.2
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCC---------------------------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDK--------------------------------------------------- 139 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK--------------------------------------------------- 139 (470)
..|+|.+++|++||.|++||+|+++++..
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 45899999999999999999999998642
Q ss_pred ----------------------------------eeeeEecCCCeEEEEEeecCCCccCCCCe---EEEEeeC
Q 036766 140 ----------------------------------VTIDVASPEAGVIKELVAKEGETVEPGTK---IAVISKS 175 (470)
Q Consensus 140 ----------------------------------~~~~i~ap~~G~l~~i~v~eG~~v~~G~~---l~~i~~~ 175 (470)
....|.||++|+|.++.+++|+.|..|++ |+.|...
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~ 191 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADL 191 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEcCC
Confidence 11359999999999999999999999998 6655443
No 54
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.04 E-value=0.00077 Score=60.19 Aligned_cols=58 Identities=21% Similarity=0.233 Sum_probs=44.1
Q ss_pred eEEEEccCCCCCCceEEEEEEEe-CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEe
Q 036766 98 LVDAVVPFMGESITDGTLAKFLK-GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELV 156 (470)
Q Consensus 98 ~~~v~~P~lg~~~~eg~I~~w~v-~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~ 156 (470)
...|-+-+.... .-|.|+-+.. ++|+.|++||.++.||+.|+..+|.||.+|+|.++.
T Consensus 45 ~~~VGITd~Aq~-~LGdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN 103 (155)
T 3hgb_A 45 TVRVGITDYAQS-ALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN 103 (155)
T ss_dssp EEEEEECHHHHH-HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred EEEEeeCHHHHH-hcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEh
Confidence 344444444332 2355555544 789999999999999999999999999999998875
No 55
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.57 E-value=0.0011 Score=54.83 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=43.1
Q ss_pred CCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 129 DEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 129 gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
|..+|.+|.++....|.||.+|+|.++++++||.|+.||+|+.++...
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k 52 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 52 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETT
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEecc
Confidence 455688888888889999999999999999999999999999998643
No 56
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.44 E-value=0.0063 Score=61.08 Aligned_cols=62 Identities=16% Similarity=0.238 Sum_probs=51.7
Q ss_pred EEEEEEEeCCCCeeeCCCcEEEEEc----CCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 113 GTLAKFLKGPGDRVELDEPIAQIET----DKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 113 g~I~~w~v~~Gd~V~~gd~l~evet----dK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+=+++..++.||.|++||+|++|.. .....+|.||.+|+|... ...-.|..|+.|+.|...+
T Consensus 265 ~Gl~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~--~~~~~V~~G~~l~~Ia~~~ 330 (331)
T 3na6_A 265 DGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISR--HFPGMIKSGDCAAVIGVVE 330 (331)
T ss_dssp CEEEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEE--ECSSEECTTCEEEEEECBC
T ss_pred CeEEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEE--eCCCccCCCCEEEEEeccC
Confidence 3377788999999999999999997 356789999999999664 4457889999999997654
No 57
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.36 E-value=0.0087 Score=60.54 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=53.4
Q ss_pred EEEEEeCCCCeeeCCCcEEEEEc----CCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 115 LAKFLKGPGDRVELDEPIAQIET----DKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 115 I~~w~v~~Gd~V~~gd~l~evet----dK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+++..++.||.|++||+|+.|+. .+...+|.||.+|+|... ..+..|..|+.|+.|.....
T Consensus 277 ~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia~~~~ 341 (354)
T 3cdx_A 277 LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVMEDYN 341 (354)
T ss_dssp EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEEEECC
T ss_pred EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEeeecC
Confidence 78888999999999999999997 478899999999999755 57789999999999986543
No 58
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.12 E-value=0.012 Score=60.03 Aligned_cols=61 Identities=16% Similarity=0.255 Sum_probs=51.7
Q ss_pred EEEEEEEeCCCCeeeCCCcEEEEEc------CCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 113 GTLAKFLKGPGDRVELDEPIAQIET------DKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 113 g~I~~w~v~~Gd~V~~gd~l~evet------dK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
+=|....++.||.|++||+|++|.. .....+|.||.+|+|.- ....-.|..|+.|+.|...
T Consensus 298 ~Gl~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~--~~~~p~V~~G~~l~~i~~~ 364 (368)
T 3fmc_A 298 AGMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPIL--HFASASVHQGTELYKVMTK 364 (368)
T ss_dssp CEEEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEE--ECSSSEECTTCEEEEEEES
T ss_pred CEEEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEE--EeCCCccCCCCEEEEEeee
Confidence 4566789999999999999999998 55778999999999965 4455789999999998753
No 59
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.06 E-value=0.0071 Score=46.16 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=31.2
Q ss_pred eEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 143 DVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 143 ~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
.|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 34 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMK 34 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEETT
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECCc
Confidence 3789999999999999999999999999998754
No 60
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.93 E-value=0.0097 Score=45.53 Aligned_cols=35 Identities=20% Similarity=0.366 Sum_probs=32.2
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||.+|+|.++++++|+.|+.||+|+.++...
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 40 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMK 40 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEETT
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEeccc
Confidence 46889999999999999999999999999998654
No 61
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.90 E-value=0.0086 Score=46.39 Aligned_cols=36 Identities=28% Similarity=0.566 Sum_probs=32.8
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|.||.+|+|.++++++|+.|+.|++|+.++...
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~~ 43 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMK 43 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEETT
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEccc
Confidence 456899999999999999999999999999998754
No 62
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=95.50 E-value=0.013 Score=49.19 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=32.1
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
+.|.|+.+|+|.++.+++|+.|+.|++|+.|+..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5789999999999999999999999999999875
No 63
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.10 E-value=0.013 Score=46.61 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=32.1
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 40 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 40 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEECSS
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEEecc
Confidence 46899999999999999999999999999998544
No 64
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=95.06 E-value=0.018 Score=51.81 Aligned_cols=60 Identities=23% Similarity=0.324 Sum_probs=52.1
Q ss_pred ceEEEEEEEeCCCCeeeC----CCcEEEEEcCCeeeeEecCCCeEEEEE-------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVEL----DEPIAQIETDKVTIDVASPEAGVIKEL------------------------------- 155 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~----gd~l~evetdK~~~~i~ap~~G~l~~i------------------------------- 155 (470)
-.|+|+.+. +..|.+-. |+-++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 569999976 78888766 8999988876 47899999999988
Q ss_pred ----eecCCCccCCCCeEEEEee
Q 036766 156 ----VAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 156 ----~v~eG~~v~~G~~l~~i~~ 174 (470)
++++||.|+.||+|+.++.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 95 GFKRIAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp TEEECSCTTCEECTTCEEEEECH
T ss_pred ccEEEEeCcCEECCCCEEEEECH
Confidence 8999999999999999963
No 65
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=94.64 E-value=0.023 Score=50.78 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=51.5
Q ss_pred ceEEEEEEEeCCCCeeeC----CCcEEEEEcCCeeeeEecCCCeEEEE--------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVEL----DEPIAQIETDKVTIDVASPEAGVIKE-------------------------------- 154 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~----gd~l~evetdK~~~~i~ap~~G~l~~-------------------------------- 154 (470)
-.|+|+.+. ++.|.+-. |+.++...++ ..+.||.+|+|..
T Consensus 14 ~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~ 89 (154)
T 2gpr_A 14 CDGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGN 89 (154)
T ss_dssp SSEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTC
T ss_pred CCeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCC
Confidence 468998874 78888766 8999988876 4899999999987
Q ss_pred ---EeecCCCccCCCCeEEEEee
Q 036766 155 ---LVAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 155 ---i~v~eG~~v~~G~~l~~i~~ 174 (470)
+++++||.|+.||+|+.++.
T Consensus 90 gF~~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 90 GFESFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp SEEECCCTTCEECTTCEEEEECH
T ss_pred ceEEEEcCCCEEcCCCEEEEECH
Confidence 48999999999999999963
No 66
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=94.58 E-value=0.072 Score=53.17 Aligned_cols=61 Identities=11% Similarity=0.214 Sum_probs=49.8
Q ss_pred EEEEEEEeCCCCeeeCCCcEEEEEc----CCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 113 GTLAKFLKGPGDRVELDEPIAQIET----DKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 113 g~I~~w~v~~Gd~V~~gd~l~evet----dK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
+-+....++.|+.|++||+|+++.. .+...+|.||.+|+|.-. ...-.|..|+.|+.|...
T Consensus 265 ~G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~--~~~p~V~~Gd~l~~ia~~ 329 (332)
T 2qj8_A 265 PGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAI--RSAMYVQGNEEVAILARP 329 (332)
T ss_dssp SEEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEE--ECSEEECTTCEEEEEEEE
T ss_pred CeEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEE--eCCCeeCCCCEEEEEeeE
Confidence 4455678999999999999999965 567788999999999554 456688999999988653
No 67
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.30 E-value=0.022 Score=46.35 Aligned_cols=36 Identities=31% Similarity=0.472 Sum_probs=31.7
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|.||.+|+|.++.+++|+.|..||+|+.++...
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k 60 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMK 60 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC--
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEeccc
Confidence 456899999999999999999999999999998644
No 68
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=94.20 E-value=0.034 Score=45.60 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=33.2
Q ss_pred eeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 140 VTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 140 ~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
-...|.++.+|+|.++++++|+.|+.||+|+.|+...
T Consensus 13 ~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~ 49 (99)
T 2ejm_A 13 TQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMK 49 (99)
T ss_dssp CCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSS
T ss_pred CceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccc
Confidence 3456899999999999999999999999999998654
No 69
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=94.02 E-value=0.027 Score=50.74 Aligned_cols=60 Identities=27% Similarity=0.382 Sum_probs=51.2
Q ss_pred ceEEEEEEEeCCCCeeeC----CCcEEEEEcCCeeeeEecCCCeEEEEE-------------------------------
Q 036766 111 TDGTLAKFLKGPGDRVEL----DEPIAQIETDKVTIDVASPEAGVIKEL------------------------------- 155 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~----gd~l~evetdK~~~~i~ap~~G~l~~i------------------------------- 155 (470)
-.|+|+.+ .+..|.+-. |+-++...++ ..+.||++|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPSE---GIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEECS---SEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 46999997 778888766 8889888773 47899999999988
Q ss_pred ----eecCCCccCCCCeEEEEee
Q 036766 156 ----VAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 156 ----~v~eG~~v~~G~~l~~i~~ 174 (470)
++++||.|+.||+|+.++.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d~ 117 (162)
T 1ax3_A 95 GFTSFVSEGDRVEPGQKLLEVDL 117 (162)
T ss_dssp TEEESCCCCSEECSEEEEEEECH
T ss_pred ccEEEEeCCCEEcCCCEEEEECH
Confidence 8999999999999999964
No 70
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=93.86 E-value=0.049 Score=52.40 Aligned_cols=52 Identities=19% Similarity=0.181 Sum_probs=39.5
Q ss_pred CCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 123 GDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 123 Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
|+--..=..-+.|+.. -...|.++.+|+|.++++++|+.|+.||+|+.|+..
T Consensus 5 ~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~ 56 (277)
T 2f1m_A 5 EPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPA 56 (277)
T ss_dssp -----CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCH
T ss_pred eccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcH
Confidence 3333334445677765 467899999999999999999999999999999754
No 71
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=93.86 E-value=0.043 Score=42.82 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=31.9
Q ss_pred eeEecCCCeEEEEE-------eecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKEL-------VAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i-------~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||..|+|.++ ++++|+.|..||+|+.++...
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k 46 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMK 46 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETT
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEecc
Confidence 46899999999998 899999999999999998754
No 72
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=93.68 E-value=0.056 Score=49.83 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=25.9
Q ss_pred EEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEE
Q 036766 117 KFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKE 154 (470)
Q Consensus 117 ~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~ 154 (470)
..+|++|+.|++||.||+-. .|-+..+|+|.+
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d 53 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 53 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEe
Confidence 57899999999999999855 677777777643
No 73
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=93.06 E-value=0.097 Score=52.21 Aligned_cols=56 Identities=25% Similarity=0.248 Sum_probs=44.6
Q ss_pred CCCCeeeCCCcEEEEEcC-CeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 121 GPGDRVELDEPIAQIETD-KVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 121 ~~Gd~V~~gd~l~evetd-K~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|+.-..-..-+.|+.+ .-...|.++.+|+|.++++++|+.|+.|++|+.|+..+
T Consensus 36 ~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 92 (359)
T 3lnn_A 36 TRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD 92 (359)
T ss_dssp EEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSS
T ss_pred eecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHH
Confidence 333333334455778875 67889999999999999999999999999999998643
No 74
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=93.02 E-value=0.041 Score=42.58 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=28.7
Q ss_pred ecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 145 ASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 145 ~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+++.+|+|.++++++||.|..||+|+.++...
T Consensus 11 ~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k 42 (77)
T 2l5t_A 11 EGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDK 42 (77)
T ss_dssp SSCCCEEEEECSCCTTCEECSCCCCCEEESSS
T ss_pred CCCccEEEEEEEeCCCCEECCCCEEEEEEccc
Confidence 45789999999999999999999999998654
No 75
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=92.21 E-value=0.12 Score=51.22 Aligned_cols=55 Identities=22% Similarity=0.325 Sum_probs=41.6
Q ss_pred eCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 120 KGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 120 v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
++.|+.-..=..-..|+.. -...|.++.+|+|.++++++|+.|+.|++|+.|+..
T Consensus 11 v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~ 65 (341)
T 3fpp_A 11 VRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPE 65 (341)
T ss_dssp --CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCH
T ss_pred EEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChH
Confidence 3444433333445667655 467899999999999999999999999999999754
No 76
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=92.12 E-value=0.11 Score=41.38 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=27.3
Q ss_pred CCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 147 PEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 147 p~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|+|.++++++||.|..||+|+.++...
T Consensus 17 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 46 (87)
T 3crk_C 17 MTMGTVQRWEKKVGEKLSEGDLLAEIETDX 46 (87)
T ss_dssp CCEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred CCcEEEEEEEcCCCCEEcCCCEEEEEECCc
Confidence 468999999999999999999999998654
No 77
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=92.06 E-value=0.069 Score=41.52 Aligned_cols=31 Identities=26% Similarity=0.275 Sum_probs=27.9
Q ss_pred cCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 146 SPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 146 ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
++.+|+|.++++++||.|..||+|+.++...
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDK 42 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSS
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccc
Confidence 4579999999999999999999999998654
No 78
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=92.02 E-value=0.11 Score=40.52 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=29.2
Q ss_pred EecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 144 VASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 144 i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+-++..|.|.++++++||.|..||+|+.++...
T Consensus 10 ~g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (81)
T 1gjx_A 10 IGGHENVDIIAVEVNVGDTIAVDDTLITLETDK 42 (81)
T ss_dssp CSSCSSEEEEEECCCSSCBCCSSCCCEEEECSS
T ss_pred CCCCCcEEEEEEEcCCCCEECCCCEEEEEEeCC
Confidence 335789999999999999999999999998654
No 79
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=91.87 E-value=0.16 Score=39.43 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=26.3
Q ss_pred CeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 149 AGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 149 ~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+|+|.++++++|+.|..||+|+.++...
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~ 41 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDK 41 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCC
Confidence 8999999999999999999999998654
No 80
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=91.64 E-value=0.18 Score=40.72 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=27.3
Q ss_pred CCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 147 PEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 147 p~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|+|.++++++||.|..||+|+.++...
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K 45 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDK 45 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSS
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCC
Confidence 468999999999999999999999998654
No 81
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=91.60 E-value=0.19 Score=44.98 Aligned_cols=46 Identities=24% Similarity=0.234 Sum_probs=40.3
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeee-EecCCCeEEEEEe
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDKVTID-VASPEAGVIKELV 156 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~-i~ap~~G~l~~i~ 156 (470)
.||.-+-..+.+|+.|.+||.|+-|.|-|.++- +.||.+|+|.-+.
T Consensus 107 aeG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~ 153 (169)
T 3d4r_A 107 AEGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN 153 (169)
T ss_dssp ECSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred eCceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEE
Confidence 356677788999999999999999999999877 8999999997654
No 82
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.04 E-value=0.2 Score=40.89 Aligned_cols=29 Identities=34% Similarity=0.518 Sum_probs=26.7
Q ss_pred CCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 148 EAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 148 ~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|+|.++++++||.|..||+|+.++...
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K 48 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDK 48 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEccc
Confidence 58999999999999999999999998654
No 83
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=90.98 E-value=0.2 Score=50.63 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=36.6
Q ss_pred EEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEe-----------------------------ecCCCccCCCC
Q 036766 117 KFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELV-----------------------------AKEGETVEPGT 167 (470)
Q Consensus 117 ~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~-----------------------------v~eG~~v~~G~ 167 (470)
+.+|++||.|++||.||+-. .|-+..+|+|.+.. +++|+.|.+|+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 67899999999999999955 55666666554322 67788888888
Q ss_pred eEE
Q 036766 168 KIA 170 (470)
Q Consensus 168 ~l~ 170 (470)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 887
No 84
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=90.90 E-value=0.017 Score=45.89 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=31.1
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
++|.+|.-|+|.++++++|+.|..|++|+.++...
T Consensus 3 ~~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k 37 (85)
T 2k7v_A 3 KEVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDK 37 (85)
T ss_dssp SCCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCC
T ss_pred cEEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccc
Confidence 56778888999999999999999999999997654
No 85
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=90.35 E-value=0.22 Score=51.03 Aligned_cols=56 Identities=18% Similarity=0.175 Sum_probs=42.4
Q ss_pred CCCCeeeCCCcEEEEEcC-CeeeeEecCCCeEEEEEee-cCCCccCCCCeEEEEeeCC
Q 036766 121 GPGDRVELDEPIAQIETD-KVTIDVASPEAGVIKELVA-KEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 121 ~~Gd~V~~gd~l~evetd-K~~~~i~ap~~G~l~~i~v-~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|+--..=...+.|+.| .-...|.++.+|+|.++.+ ++||.|+.||+|+.|+..+
T Consensus 100 ~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~ 157 (413)
T 3ne5_B 100 TRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPD 157 (413)
T ss_dssp EEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCS
T ss_pred EEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHH
Confidence 333333333445566653 4568899999999999998 9999999999999998544
No 86
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=89.98 E-value=0.17 Score=42.19 Aligned_cols=30 Identities=30% Similarity=0.454 Sum_probs=27.1
Q ss_pred CCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 147 PEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 147 p~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|+|.++++++||.|..||+|+.|+...
T Consensus 19 ~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K 48 (108)
T 2dne_A 19 MQAGTIARWEKKEGDKINEGDLIAEVETDK 48 (108)
T ss_dssp CCEEEEEECSSCTTCEECTTSEEEEEECSS
T ss_pred cccEEEEEEEcCCCCEecCCCEEEEEEcCc
Confidence 358999999999999999999999998654
No 87
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=89.36 E-value=0.19 Score=50.65 Aligned_cols=45 Identities=22% Similarity=0.283 Sum_probs=37.5
Q ss_pred CcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 130 EPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 130 d~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..-+.|+.. -...|.++.+|+|.++++++|+.|+.||+|+.|+..
T Consensus 33 ~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~ 77 (369)
T 1vf7_A 33 ELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPA 77 (369)
T ss_dssp EEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCH
T ss_pred EEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcH
Confidence 334566654 467899999999999999999999999999999754
No 88
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=88.49 E-value=0.2 Score=46.20 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=35.4
Q ss_pred eCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEE--------------------------E--eecCCCccCCCCeEEE
Q 036766 120 KGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKE--------------------------L--VAKEGETVEPGTKIAV 171 (470)
Q Consensus 120 v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~--------------------------i--~v~eG~~v~~G~~l~~ 171 (470)
|++|++|+.||+|+ - ...|-|..+|+|.= + +|++||.|..|+.|+.
T Consensus 85 V~dG~~V~~GdvLA---K---d~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~D 158 (193)
T 2xha_A 85 LRVGTKVKQGLPLS---K---NEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 158 (193)
T ss_dssp CCTTCEECTTSBSS---T---TSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEcCCCEEe---c---CCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCccc
Confidence 79999999999999 2 23456777777641 2 7889999999998874
No 89
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=88.15 E-value=0.34 Score=41.78 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=27.0
Q ss_pred CCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 148 EAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 148 ~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
.+|+|.++++++||.|..||+|+.|+....
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~ 69 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDKA 69 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSSC
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCcc
Confidence 579999999999999999999999986543
No 90
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=88.01 E-value=0.11 Score=40.62 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=27.0
Q ss_pred CCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 147 PEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 147 p~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..+|+|.++++++||.|..||+|+.++...
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 43 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDK 43 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSS
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccc
Confidence 468999999999999999999999997644
No 91
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=87.56 E-value=0.53 Score=43.29 Aligned_cols=45 Identities=27% Similarity=0.398 Sum_probs=38.2
Q ss_pred EEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCcc
Q 036766 117 KFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETV 163 (470)
Q Consensus 117 ~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v 163 (470)
..+|++||.|++|+.||+. |..+..|-+..+|+|.=-.+.+|.++
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~ 107 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTI 107 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTE
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcce
Confidence 6789999999999999976 79999999999999976656666543
No 92
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=86.58 E-value=0.18 Score=50.32 Aligned_cols=55 Identities=27% Similarity=0.319 Sum_probs=42.2
Q ss_pred CCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 121 GPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 121 ~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|+--..=..-+.|+.. -...|.++.+|+|.++++++|+.|+.||+|+.|+..+
T Consensus 13 ~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~ 67 (369)
T 4dk0_A 13 KRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTT 67 (369)
T ss_dssp CEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHH
T ss_pred EecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHH
Confidence 333333334445677744 4668999999999999999999999999999998643
No 93
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=85.92 E-value=0.52 Score=36.38 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=28.6
Q ss_pred EEEEccCCCCCCceEEEEEEEeCCCCeeeCCCcEEEEEcC
Q 036766 99 VDAVVPFMGESITDGTLAKFLKGPGDRVELDEPIAQIETD 138 (470)
Q Consensus 99 ~~v~~P~lg~~~~eg~I~~w~v~~Gd~V~~gd~l~evetd 138 (470)
.++.-| ..|+|.++++++|+.|..|++|+.|+..
T Consensus 42 ~~i~Ap------~~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 42 MEVPSP------KAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp EEEECS------SSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred EEEECC------CCEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 455555 4689999999999999999999999853
No 94
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=85.87 E-value=0.63 Score=51.00 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=32.7
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
...|.||..|+|.++++++||.|+.||+|++++...
T Consensus 612 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 647 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMK 647 (681)
T ss_dssp CSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSS
T ss_pred CCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecC
Confidence 456999999999999999999999999999998654
No 95
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=85.15 E-value=1.2 Score=40.58 Aligned_cols=59 Identities=25% Similarity=0.424 Sum_probs=41.8
Q ss_pred eEEEEEEEeCCCCeee----CCCcEEEEEcCCeeeeEecCCCeEEEEE--------------------------------
Q 036766 112 DGTLAKFLKGPGDRVE----LDEPIAQIETDKVTIDVASPEAGVIKEL-------------------------------- 155 (470)
Q Consensus 112 eg~I~~w~v~~Gd~V~----~gd~l~evetdK~~~~i~ap~~G~l~~i-------------------------------- 155 (470)
.|+++.. -++-|.|= -||-++..=++- .|.||++|+|..+
T Consensus 42 ~G~vi~L-~eV~D~vFs~~~mGdG~AI~P~~g---~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiDTV~L~G~g 117 (183)
T 3our_B 42 SGEIVNI-EDVPDVVFAEKIVGDGIAIKPTGN---KMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGIDTVELKGEG 117 (183)
T ss_dssp CEEEEEG-GGSSCHHHHTTSSCEEEEEEECSS---EEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTT
T ss_pred ceEEEEc-hhCcChHhcccCccCeEEEEcCCC---EEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEecccccccCCcc
Confidence 4666544 24444441 177777666543 6778888888776
Q ss_pred ---eecCCCccCCCCeEEEEee
Q 036766 156 ---VAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 156 ---~v~eG~~v~~G~~l~~i~~ 174 (470)
++++||.|+.||+|+.++.
T Consensus 118 F~~~V~~Gd~Vk~Gd~L~~fD~ 139 (183)
T 3our_B 118 FTRIAEEGQTVKAGDTVIEFDL 139 (183)
T ss_dssp EEECSCTTCEECTTCEEEEECH
T ss_pred ceEEEeCcCEEcCCCEEEEECH
Confidence 7999999999999999974
No 96
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=81.20 E-value=1.2 Score=52.00 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=33.5
Q ss_pred eeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 140 VTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 140 ~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
....|.||..|+|.++++++||.|+.||+|++|+...
T Consensus 1166 ~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 1202 (1236)
T 3va7_A 1166 DAELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMK 1202 (1236)
T ss_dssp TCEEEECSSCEEEEEESSCTTCEECSSCEEEEEEETT
T ss_pred CCcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecC
Confidence 3456999999999999999999999999999998754
No 97
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=80.64 E-value=1.2 Score=51.59 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=32.5
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||..|+|.+++|++||.|+.||+|+.++...
T Consensus 1078 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ieamK 1112 (1150)
T 3hbl_A 1078 SHIGAQMPGSVTEVKVSVGETVKANQPLLITEAMK 1112 (1150)
T ss_dssp SEEECSSSEEEEEECCCTTCEECTTCEEEEEESSS
T ss_pred ceeecCceEEEEEEEeCCCCEECCCCEEEEEEecc
Confidence 46999999999999999999999999999998654
No 98
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.59 E-value=1 Score=49.57 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.4
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||..|+|.++.+++||.|+.||+|++++...
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamK 684 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMK 684 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSS
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEeccc
Confidence 56999999999999999999999999999998644
No 99
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=79.81 E-value=28 Score=35.32 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=25.3
Q ss_pred EEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 434 YIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 434 ~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
.|-+++||-++||+-...|+++|.+..+
T Consensus 135 ~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~ 162 (493)
T 4hvm_A 135 VLGVVAHQMLLDARSRYMVLGAVWQAYY 162 (493)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEecchhhccHHHHHHHHHHHHHHhC
Confidence 3789999999999999999999998763
No 100
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=75.57 E-value=2 Score=49.93 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=30.1
Q ss_pred EEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEE
Q 036766 117 KFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKE 154 (470)
Q Consensus 117 ~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~ 154 (470)
..+|++||.|++||.||+. |--+..|-+..+|+|.=
T Consensus 1002 ~l~v~~g~~V~~g~~ia~w--Dp~~~piise~~G~v~f 1037 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRF 1037 (1407)
T ss_dssp EESSCSSCEECTTCEEEEC--CSSCCCEECSSCEEEEE
T ss_pred EEEEcCCCEecCCCEEEEE--ecCceeEEeccceEEEE
Confidence 5789999999999999987 56677888888887753
No 101
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=75.20 E-value=0.59 Score=51.17 Aligned_cols=35 Identities=26% Similarity=0.472 Sum_probs=0.0
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
-.|.||..|+|.++++++||.|+.||+|++++...
T Consensus 603 ~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 637 (675)
T 3u9t_A 603 GGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMK 637 (675)
T ss_dssp -----------------------------------
T ss_pred CeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEecc
Confidence 45899999999999999999999999999998643
No 102
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=74.83 E-value=1.2 Score=39.49 Aligned_cols=70 Identities=17% Similarity=0.256 Sum_probs=43.0
Q ss_pred EEEEccCCCCC--CceEEEEEEEeCCCCeeeCCCcEEEEEcCCe--------e-eeEecCCCeEEEEEeecCCCccCCCC
Q 036766 99 VDAVVPFMGES--ITDGTLAKFLKGPGDRVELDEPIAQIETDKV--------T-IDVASPEAGVIKELVAKEGETVEPGT 167 (470)
Q Consensus 99 ~~v~~P~lg~~--~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~--------~-~~i~ap~~G~l~~i~v~eG~~v~~G~ 167 (470)
.++.+ .+|-. ..+|+=.+.+|++||+|++||+|+++.-++. + +-+.- .+ ...+....+..|..|+
T Consensus 73 ~evLi-HiGidTv~l~G~gF~~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t~vvvtn-~~--~~~~~~~~~~~v~~g~ 148 (154)
T 2gpr_A 73 VEILL-HIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTN-NG--GKTLEIVKMGEVKQGD 148 (154)
T ss_dssp CEEEE-ECSSSGGGGTTCSEEECCCTTCEECTTCEEEEECHHHHHHHSSCCCEEEEEEE-CS--SCCCSCBCCEEECTTC
T ss_pred CEEEE-EECcchhhcCCCceEEEEcCCCEEcCCCEEEEECHHHHHhcCCCCeEEEEEEC-CC--cceEEEccCceEcCCC
Confidence 34444 44543 3367778899999999999999999985431 1 11222 11 1122233455678888
Q ss_pred eEEEE
Q 036766 168 KIAVI 172 (470)
Q Consensus 168 ~l~~i 172 (470)
.+..+
T Consensus 149 ~~~~~ 153 (154)
T 2gpr_A 149 VVAIL 153 (154)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87765
No 103
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=74.25 E-value=2.2 Score=49.60 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=28.4
Q ss_pred eeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 142 IDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 142 ~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
..|.||..|+|.++.+++||.|+.||+|++++...
T Consensus 1096 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamK 1130 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMK 1130 (1165)
T ss_dssp TEEECSSCEEEEEECCSSCCCC---CEEEEEEC--
T ss_pred ceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEccc
Confidence 56999999999999999999999999999998543
No 104
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=71.81 E-value=2.3 Score=42.77 Aligned_cols=28 Identities=18% Similarity=0.202 Sum_probs=20.3
Q ss_pred eCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEE
Q 036766 120 KGPGDRVELDEPIAQIETDKVTIDVASPEAGVIK 153 (470)
Q Consensus 120 v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~ 153 (470)
+++|++|+.||+|+ -...|-|..+|+|.
T Consensus 125 v~~g~~v~~G~vla------k~~aiiaeidG~V~ 152 (352)
T 2xhc_A 125 LRVGTKVKQGLPLS------KNEEYICELDGKIV 152 (352)
T ss_dssp CCTTCEECTTCBSB------SSSSCBCCSCEEEE
T ss_pred cCCCCEEccCcEEe------cCceEEeccceEEE
Confidence 79999999999988 22345566666664
No 105
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=71.55 E-value=3.5 Score=41.21 Aligned_cols=51 Identities=10% Similarity=-0.069 Sum_probs=40.9
Q ss_pred EeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 119 LKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 119 ~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
.++.|+.|++||+|+++- | -+|.+|++|.+.- .. .-.|..|+.++.+....
T Consensus 280 ~~~~g~~V~~G~~La~i~-d---~~v~a~~dG~~i~--~p-~p~V~~G~~~~~i~~~~ 330 (350)
T 2bco_A 280 NVENFTSFVHGEVFGHDG-D---KPLMAKNDNEAIV--FP-NRHVAIGQRAALMVCEV 330 (350)
T ss_dssp TCCBTEECCTTCEEEEET-T---EEEECSSSSCEEE--SC-CTTCCTTSEEEEEEEEC
T ss_pred cccCCCEeCCCCEEEEEC-C---EEEEeCCCCEEEE--ec-CCCCCCCcEEEEEEEEc
Confidence 368999999999999995 4 6889999998743 33 67899999888876544
No 106
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=71.34 E-value=0.82 Score=43.24 Aligned_cols=32 Identities=31% Similarity=0.460 Sum_probs=0.0
Q ss_pred cCCCeEEEEEeecCCCccCCCCeEEEEeeCCC
Q 036766 146 SPEAGVIKELVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 146 ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+...|+|.++++++||.|..||+|+.|+....
T Consensus 14 sm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~ 45 (229)
T 1zy8_K 14 TMEEGNIVKWLKKEGEAVSAGDALCEIETDKA 45 (229)
T ss_dssp --------------------------------
T ss_pred CCCcEEEEEEecCCCCEeCCCCEEEEEecCCc
Confidence 34689999999999999999999999986543
No 107
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=66.42 E-value=72 Score=33.41 Aligned_cols=167 Identities=11% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHhhcCccccHHHHHHHHHHHHHhhCCccceEEeCCeEEEeecccEEEEEecCC-----------CeEEEE--E
Q 036766 283 SEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTSK-----------GLVVPV--I 349 (470)
Q Consensus 283 k~~~~~~~~~~g~k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~~~i~igiAV~~~~-----------GL~vpv--I 349 (470)
+++.+..++..|.++|+++++.-|++.|+.++..-...-+...+. ++++|+.-. |++... +
T Consensus 290 ~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~------~~~pvnlR~~l~~~~~~n~~~~~~~~~~~ 363 (519)
T 3fot_A 290 IDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFI------SPTSVDGRRWLREDIASNFYAMCQTAAVV 363 (519)
T ss_dssp HHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEE------EEEEEECGGGBCHHHHTSCCSCCEEEEEE
T ss_pred HHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEE------EEeeeeccccCCCcccccccceeeeeeee
Q ss_pred EeCCCCC---------------HHHHHHHHHHHHHHHhcCC--------------------CCCCcCCCCeEEEEeCCCC
Q 036766 350 RNADKMN---------------FADIEKEINTLAKKANDGS--------------------ISIDEMAGGSFTISNGGVY 394 (470)
Q Consensus 350 ~~a~~~s---------------l~ei~~~i~~l~~~ar~g~--------------------l~~~d~~ggtftISnlG~~ 394 (470)
+...-++ |.++++++++.-+...++. ..+.+- ..+..+||+|.+
T Consensus 364 ~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~-~~tp~lSslG~v 442 (519)
T 3fot_A 364 RIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEG-EANPLFISDGIN 442 (519)
T ss_dssp EECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCS-BCCCEEEEEEEG
T ss_pred EecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCC-ccCcccccCCcc
Q ss_pred C--CCCccc--------ccCCCceeEEEEecceeEEEEeCCeEeEEcEEEEEEEecccccChHHHHHHHHHHHHHh
Q 036766 395 G--SLLSTP--------IINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVV 460 (470)
Q Consensus 395 G--~~~~tp--------ii~~p~~aIl~vG~i~~~Pvv~~G~i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~L 460 (470)
. +..-.. + .+-=+-+|.-...+.+.=+-...+..|.|++.||-...|...+-.||+.+++.|
T Consensus 443 d~~lp~~y~~~~~~~~~~----~V~~~~~~~~~~~~~~~~~~~Tf~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L 514 (519)
T 3fot_A 443 ERFIPHEIKQTATGENVL----SVESIDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEFM 514 (519)
T ss_dssp GGTSCSEEEETTTTEEEE----EEEEEEEEECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred ccccchhhccccCCCCce----EEEEEEEEccccCCceEEEEEEECCEEEEEEEeccccCCHHHHHHHHHHHHHHH
No 108
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=63.87 E-value=3.5 Score=37.50 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=24.2
Q ss_pred eEEEEEEEeCCCCeeeCCCcEEEEEcCC
Q 036766 112 DGTLAKFLKGPGDRVELDEPIAQIETDK 139 (470)
Q Consensus 112 eg~I~~w~v~~Gd~V~~gd~l~evetdK 139 (470)
+|+--+++|++||+|++||+|+++.-++
T Consensus 114 ~G~gF~~~V~~Gd~Vk~Gd~L~~fD~~~ 141 (183)
T 3our_B 114 KGEGFTRIAEEGQTVKAGDTVIEFDLAL 141 (183)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHHH
T ss_pred CCccceEEEeCcCEEcCCCEEEEECHHH
Confidence 4666789999999999999999998653
No 109
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=61.52 E-value=1.7 Score=44.90 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=0.0
Q ss_pred CCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 147 PEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 147 p~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
-.+|+|.++++++||.|..||+|++|+...
T Consensus 14 ~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K 43 (428)
T 3dva_I 14 IHEGEIVKWFVKPGDEVNEDDVLCEVQNDK 43 (428)
T ss_dssp ------------------------------
T ss_pred CccEEEEEEEcCCCCEECCCCEEEEEEeCC
Confidence 457999999999999999999999998643
No 110
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=58.25 E-value=12 Score=38.52 Aligned_cols=43 Identities=23% Similarity=0.368 Sum_probs=36.8
Q ss_pred EEcCCeeeeEecCCCeEEEEE-------------------------------eecCCCccCCCCeEEEEeeCCC
Q 036766 135 IETDKVTIDVASPEAGVIKEL-------------------------------VAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 135 vetdK~~~~i~ap~~G~l~~i-------------------------------~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+...+-..+|.|+.+|+|..| +.+.||.|..|++|++|....+
T Consensus 329 ~~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 402 (433)
T 1brw_A 329 LPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGDRVQKGEALATIHSNRP 402 (433)
T ss_dssp SCCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTTCEECTTCEEEEEEESSS
T ss_pred CCCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEEcCCc
Confidence 455778888999999999777 7889999999999999987654
No 111
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=57.42 E-value=8.5 Score=38.72 Aligned_cols=33 Identities=15% Similarity=0.347 Sum_probs=29.4
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEee
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISK 174 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~ 174 (470)
..-+.||.+|.+. ..++.|+.|+.||+|+.|.+
T Consensus 290 ~~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d 322 (368)
T 3fmc_A 290 YRKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLR 322 (368)
T ss_dssp EEEEECSSCEEEE-ECSCTTCCBCTTCEEEEEEC
T ss_pred cEEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEc
Confidence 3448999999995 68999999999999999987
No 112
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=57.33 E-value=11 Score=38.68 Aligned_cols=42 Identities=21% Similarity=0.443 Sum_probs=35.2
Q ss_pred EEcCCeeeeEecCCCeEEEEE-------------------------------eecCCCccCCCCeEEEEeeCCC
Q 036766 135 IETDKVTIDVASPEAGVIKEL-------------------------------VAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 135 vetdK~~~~i~ap~~G~l~~i-------------------------------~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+...+ ..+|.|+.+|+|..+ +.+.||.|..|++|++|....+
T Consensus 322 ~~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 394 (423)
T 2dsj_A 322 LPLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGDRVERGEALALVYHRRR 394 (423)
T ss_dssp SCCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEEECSS
T ss_pred CCCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCCCEeCCCCeEEEEEeCCc
Confidence 34566 888999999999776 7889999999999999987654
No 113
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=54.00 E-value=10 Score=37.53 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=29.5
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..-|.||.+|.+.- .++.||.|+.||+|+.|.+.
T Consensus 257 ~~~v~A~~~Gl~~~-~v~~Gd~V~~G~~la~I~dp 290 (331)
T 3na6_A 257 DCYLFSEHDGLFEI-MIDLGEPVQEGDLVARVWSP 290 (331)
T ss_dssp CCCEECSSCEEEEE-SSCTTCEECTTCEEEEEECS
T ss_pred cEEEeCCCCeEEEE-cCCCCCEEcCCCEEEEEEcC
Confidence 44589999998854 79999999999999999875
No 114
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=52.56 E-value=9.1 Score=37.19 Aligned_cols=24 Identities=21% Similarity=0.123 Sum_probs=20.3
Q ss_pred EEEEEEeCCCCeeeCCCcEEEEEc
Q 036766 114 TLAKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 114 ~I~~w~v~~Gd~V~~gd~l~evet 137 (470)
--++|++++|+.|++||+|++++-
T Consensus 71 ~~v~~~~~dG~~v~~g~~v~~i~G 94 (284)
T 1qpo_A 71 YRVLDRVEDGARVPPGEALMTLEA 94 (284)
T ss_dssp EEEEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEEEcCCCCEecCCcEEEEEEE
Confidence 346899999999999999999884
No 115
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=52.43 E-value=7.3 Score=34.70 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=23.5
Q ss_pred eEEEEEEEeCCCCeeeCCCcEEEEEcC
Q 036766 112 DGTLAKFLKGPGDRVELDEPIAQIETD 138 (470)
Q Consensus 112 eg~I~~w~v~~Gd~V~~gd~l~evetd 138 (470)
+|+=.+.+|++||+|++||+|+++.-+
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (161)
T 1f3z_A 92 KGEGFKRIAEEGQRVKVGDTVIEFDLP 118 (161)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHH
T ss_pred CCCccEEEEeCcCEECCCCEEEEECHH
Confidence 566678899999999999999999854
No 116
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=52.00 E-value=11 Score=38.04 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=26.9
Q ss_pred EEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 433 MYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 433 m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
+-|+++++|.++||.-+..|++.+.++..
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 180 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCR 180 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhc
Confidence 55999999999999999999999999875
No 117
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=51.92 E-value=11 Score=38.42 Aligned_cols=29 Identities=28% Similarity=0.281 Sum_probs=27.3
Q ss_pred EEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 433 MYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 433 m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
+-|+++++|.++||.-+..|++.+.++..
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 55999999999999999999999999887
No 118
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=51.72 E-value=12 Score=38.12 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=27.3
Q ss_pred EEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 433 MYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 433 m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
+-|+++++|.++||.-+..|++.+.++..
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 55999999999999999999999999887
No 119
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=51.58 E-value=16 Score=37.65 Aligned_cols=38 Identities=26% Similarity=0.437 Sum_probs=33.0
Q ss_pred EcCCeeeeEecCCCeEEEEE-------------------------------eecCCCccCCCCeEEEEe
Q 036766 136 ETDKVTIDVASPEAGVIKEL-------------------------------VAKEGETVEPGTKIAVIS 173 (470)
Q Consensus 136 etdK~~~~i~ap~~G~l~~i-------------------------------~v~eG~~v~~G~~l~~i~ 173 (470)
...+-..+|.|+.+|+|..| +++.||.|..|++|++|.
T Consensus 333 ~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G~~V~~g~~l~~i~ 401 (436)
T 3h5q_A 333 PQAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIH 401 (436)
T ss_dssp CCCSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEE
T ss_pred CCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCcCEeCCCCeEEEEe
Confidence 34567888999999999888 678999999999999999
No 120
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=51.48 E-value=12 Score=38.13 Aligned_cols=30 Identities=10% Similarity=0.160 Sum_probs=27.5
Q ss_pred EEEEEEecccccChHHHHHHHHHHHHHhhC
Q 036766 433 MYIALTYDHRLIDGREAVFFLRRIKDVVEE 462 (470)
Q Consensus 433 m~lsls~DHRviDG~~aa~Fl~~l~~~Le~ 462 (470)
+-|+++++|.++||.-+..|++.+.+.+..
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 559999999999999999999999998764
No 121
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=49.91 E-value=8.7 Score=37.38 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=17.9
Q ss_pred EEEEeCCCCeeeCCCcEEEEEc
Q 036766 116 AKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~evet 137 (470)
++|++++|+.|++||+|++++-
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~G 95 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVRG 95 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEEE
Confidence 5788888888888888888873
No 122
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=49.45 E-value=9 Score=37.33 Aligned_cols=22 Identities=14% Similarity=0.273 Sum_probs=18.0
Q ss_pred EEEEeCCCCeeeCCCcEEEEEc
Q 036766 116 AKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~evet 137 (470)
++|++++|+.|++||+|++++-
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~G 98 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELKG 98 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEEE
Confidence 4788888888888888888873
No 123
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=49.40 E-value=15 Score=31.76 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=27.2
Q ss_pred EecCCCeEEEEEee-cCCCccCCCCeEEEEeeCCC
Q 036766 144 VASPEAGVIKELVA-KEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 144 i~ap~~G~l~~i~v-~eG~~v~~G~~l~~i~~~~~ 177 (470)
+.+|.-|.|..+.+ ++|+.|..|++|+.|+....
T Consensus 39 ~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K~ 73 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKA 73 (136)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSC
T ss_pred hhcccCCCcEEEEecCCCCEEeCCCEEEEEEEccE
Confidence 44566677777766 99999999999999986543
No 124
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=48.99 E-value=8.3 Score=37.52 Aligned_cols=22 Identities=32% Similarity=0.360 Sum_probs=17.7
Q ss_pred EEEEeCCCCeeeCCCcEEEEEc
Q 036766 116 AKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~evet 137 (470)
++|++++|+.|++||+|++++-
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~G 94 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIEG 94 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEE
Confidence 5788888888888888888873
No 125
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=48.99 E-value=9.8 Score=37.27 Aligned_cols=21 Identities=19% Similarity=0.164 Sum_probs=16.8
Q ss_pred EEEEeCCCCeeeCCCcEEEEE
Q 036766 116 AKFLKGPGDRVELDEPIAQIE 136 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~eve 136 (470)
++|++++|+.|++||+|++++
T Consensus 86 v~~~~~dG~~v~~g~~v~~i~ 106 (300)
T 3l0g_A 86 YEIHKKDGDITGKNSTLVSGE 106 (300)
T ss_dssp EEECCCTTCEECSSCEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEE
Confidence 478888888888888888777
No 126
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=48.96 E-value=15 Score=37.48 Aligned_cols=29 Identities=17% Similarity=0.384 Sum_probs=26.8
Q ss_pred EEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 433 MYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 433 m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
+-|+++++|.++||.-+..|++.+.+...
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 178 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMAR 178 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhC
Confidence 45999999999999999999999999875
No 127
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=48.67 E-value=11 Score=36.16 Aligned_cols=22 Identities=9% Similarity=0.107 Sum_probs=17.0
Q ss_pred EEEEeCCCCeeeCCCcEEEEEc
Q 036766 116 AKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~evet 137 (470)
++|.+++|+.|..||+|++|+-
T Consensus 60 v~~~~~eG~~v~~g~~~~~v~G 81 (273)
T 2b7n_A 60 CVQTIKDKERFKPKDALMEIRG 81 (273)
T ss_dssp EEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEe
Confidence 4678888888888888887773
No 128
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=46.83 E-value=12 Score=38.59 Aligned_cols=43 Identities=28% Similarity=0.424 Sum_probs=36.9
Q ss_pred EEcCCeeeeEecCCCeEEEEE-------------------------------eecCCCccCCCCeEEEEeeCCC
Q 036766 135 IETDKVTIDVASPEAGVIKEL-------------------------------VAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 135 vetdK~~~~i~ap~~G~l~~i-------------------------------~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+...+...+|.|+.+|+|..| +.+.||.|..|++|++|....+
T Consensus 334 ~~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 334 LPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDE 407 (440)
T ss_dssp SCCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTTCEEBTTBCSEEEEESSH
T ss_pred CCCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEecCCH
Confidence 455778889999999999887 7889999999999999987654
No 129
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=46.78 E-value=10 Score=37.07 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=14.1
Q ss_pred EEEEeCCCCeeeCCCcEEEEE
Q 036766 116 AKFLKGPGDRVELDEPIAQIE 136 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~eve 136 (470)
++|++++|+.|++||+|++|+
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~ 108 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELR 108 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEE
Confidence 456667777776666666666
No 130
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=46.62 E-value=8.5 Score=34.28 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=25.3
Q ss_pred CceEEEEEEEeCCCCeeeCCCcEEEEEcCC
Q 036766 110 ITDGTLAKFLKGPGDRVELDEPIAQIETDK 139 (470)
Q Consensus 110 ~~eg~I~~w~v~~Gd~V~~gd~l~evetdK 139 (470)
..+|+=.+.+|++||+|++||+|+++.-++
T Consensus 90 ~l~G~gF~~~V~~Gd~V~~G~~L~~~d~~~ 119 (162)
T 1ax3_A 90 SLKGEGFTSFVSEGDRVEPGQKLLEVDLDA 119 (162)
T ss_dssp TTTTTTEEESCCCCSEECSEEEEEEECHHH
T ss_pred hcCCCccEEEEeCCCEEcCCCEEEEECHHH
Confidence 346777888999999999999999997543
No 131
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=45.89 E-value=26 Score=36.55 Aligned_cols=43 Identities=16% Similarity=0.383 Sum_probs=35.9
Q ss_pred EEcCCeeeeEecCCCeEEEE-----------------------------EeecCCCccCCCCeEEEEeeCCC
Q 036766 135 IETDKVTIDVASPEAGVIKE-----------------------------LVAKEGETVEPGTKIAVISKSGE 177 (470)
Q Consensus 135 vetdK~~~~i~ap~~G~l~~-----------------------------i~v~eG~~v~~G~~l~~i~~~~~ 177 (470)
+-..+-..+|.|+.+|+|.. ++++.||.|..|++|++|....+
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~~ 437 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGP 437 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTTCEECTTCEEEEEEESSS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCCCEECCCCeEEEEEcCCh
Confidence 45677888899999999954 57889999999999999987654
No 132
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=45.60 E-value=11 Score=37.26 Aligned_cols=22 Identities=9% Similarity=0.261 Sum_probs=16.0
Q ss_pred EEEEEeCCCCeeeCCCcEEEEE
Q 036766 115 LAKFLKGPGDRVELDEPIAQIE 136 (470)
Q Consensus 115 I~~w~v~~Gd~V~~gd~l~eve 136 (470)
-++|++++|+.|++||+|++|+
T Consensus 109 ~v~~~~~dG~~v~~g~~l~~v~ 130 (320)
T 3paj_A 109 SIEWHVQDGDTLTPNQTLCTLT 130 (320)
T ss_dssp EEEESSCTTCEECTTCEEEEEE
T ss_pred EEEEEeCCCCEecCCCEEEEEE
Confidence 3567777777777777777776
No 133
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=44.74 E-value=12 Score=36.60 Aligned_cols=24 Identities=8% Similarity=0.256 Sum_probs=20.4
Q ss_pred EEEEEeCCCCeeeCCCcEEEEEcC
Q 036766 115 LAKFLKGPGDRVELDEPIAQIETD 138 (470)
Q Consensus 115 I~~w~v~~Gd~V~~gd~l~evetd 138 (470)
-++|.+++|+.|..||+|++|+-.
T Consensus 86 ~v~~~~~dG~~v~~g~~~~~v~G~ 109 (296)
T 1qap_A 86 RLTWHVDDGDAIHANQTVFELQGP 109 (296)
T ss_dssp EEEESCCTTCEECTTCEEEEEEEE
T ss_pred EEEEEcCCCCEecCCCEEEEEEEc
Confidence 468999999999999999998843
No 134
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=44.60 E-value=2.3e+02 Score=27.56 Aligned_cols=143 Identities=13% Similarity=0.054 Sum_probs=79.0
Q ss_pred cccHHHHHHHHHHHHHhhCCccceEEeCCeEEEeecccEEEEEecCC--------Ce---EEEE-EEeCCCCCHHHHHHH
Q 036766 296 KLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGTSK--------GL---VVPV-IRNADKMNFADIEKE 363 (470)
Q Consensus 296 k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~~~i~igiAV~~~~--------GL---~vpv-I~~a~~~sl~ei~~~ 363 (470)
++|++.+++-|.+.+|.++-. + .+-+|+.+..-+ |. .+|+ +.-....++.++.++
T Consensus 231 ~~t~~~~l~aa~~~~L~~~~g-~------------dv~ig~~~~~R~~~~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~ 297 (436)
T 1l5a_A 231 QIGWPDALVALCALYLESAEP-D------------APWLWLPFMNRWGSVAANVPGLMVNSLPLLRLSAQQTSLGNYLKQ 297 (436)
T ss_dssp TCCHHHHHHHHHHHHHHHHST-T------------CCEEEEEECCCTTSGGGGSCSCCCEEEEEECCCCTTCBHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhC-C------------ceEEeeecccCCChHHhcCcceEEEEEEEEEecCCCCCHHHHHHH
Confidence 679999999999999998632 2 355666665211 32 3454 333456799999999
Q ss_pred HHHHHHHHhcCC-CCC-------------CcCCCCeEEEEeCCCC--CCCCcccccCCCceeEEEEecceeEEE-EeCCe
Q 036766 364 INTLAKKANDGS-ISI-------------DEMAGGSFTISNGGVY--GSLLSTPIINPPQSAILGMHSIVQRPM-VVGGN 426 (470)
Q Consensus 364 i~~l~~~ar~g~-l~~-------------~d~~ggtftISnlG~~--G~~~~tpii~~p~~aIl~vG~i~~~Pv-v~~G~ 426 (470)
+++....+.+.. +.. ..+..-.|.+.+...- +...... ..+..+....-.+ +..
T Consensus 298 v~~~~~~~~~h~~~~~~~i~~~l~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~l~v~~-- 368 (436)
T 1l5a_A 298 SGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILPFESPHFADCQTEL-------KVLASGSAEGINFTFRG-- 368 (436)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHTTCCTTCCBCCCSEEEEECCCCCCCTTCEEEE-------EEEEECCCCSEEEEEEE--
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhcccccCCCccceEEEeeccCccccCCCeeEE-------EecCCCCccceEEEEEe--
Confidence 998776665432 111 1122233444433211 1000000 0011111110000 000
Q ss_pred EeEEcEEEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 427 VVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 427 i~~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
.....+.+.+.||-.+++...+.+|++.+..+|+
T Consensus 369 -~~~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~ 402 (436)
T 1l5a_A 369 -SPQHELCLDITADLASYPQSHWQSHCERFPRFFE 402 (436)
T ss_dssp -CTTSCEEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred -cCCCcEEEEEEeChhhCCHHHHHHHHHHHHHHHH
Confidence 0012467999999999999999988888877765
No 135
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=43.77 E-value=1.7e+02 Score=33.96 Aligned_cols=149 Identities=12% Similarity=0.137 Sum_probs=79.7
Q ss_pred cccHHHHHHHHHHHHHhhCCccceEEeCCeEEEeecccEEEEEec-CC---------Ce---EEEE-EEeCCCCCHHHHH
Q 036766 296 KLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGT-SK---------GL---VVPV-IRNADKMNFADIE 361 (470)
Q Consensus 296 k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~~~i~igiAV~~-~~---------GL---~vpv-I~~a~~~sl~ei~ 361 (470)
++|++.++.-|.+..|.++ .+. +++-+|+.|+. +. |. .+|+ +.-....+|.++.
T Consensus 251 ~~T~~~vllaa~a~~L~r~-------tg~-----~dvv~G~pvsgR~~~~~~~~~~vG~fvntlplr~~~~~~~s~~~ll 318 (1304)
T 2vsq_A 251 HTTLSTALQAVWSVLISRY-------QQS-----GDLAFGTVVSGRPAEIKGVEHMVGLFINVVPRRVKLSEGITFNGLL 318 (1304)
T ss_dssp TCCHHHHHHHHHHHHHHHH-------HTC-----SEEEEEEEECCCCTTSTTGGGCCSSCCEEEEEEEECCTTCBHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh-------cCC-----CCEEEEEEeCCCCccchhhhcccccceeEEEEEecCCCCCcHHHHH
Confidence 6799999999999999876 221 23457777752 11 32 3444 4445678999999
Q ss_pred HHHHHHHHHHhcCCC----------CCCcCCCCeEEEEeCCCCCCCCcccccCCCceeEEEEeccee---EEEEeCCeEe
Q 036766 362 KEINTLAKKANDGSI----------SIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQ---RPMVVGGNVV 428 (470)
Q Consensus 362 ~~i~~l~~~ar~g~l----------~~~d~~ggtftISnlG~~G~~~~tpii~~p~~aIl~vG~i~~---~Pvv~~G~i~ 428 (470)
+++++....+.+..- ....+....|.+.|.+.-+..............-+.+....+ ...+..|
T Consensus 319 ~~v~~~~~~a~~hq~~p~~~i~~~l~~~~lf~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~dL~l~~~~~--- 395 (1304)
T 2vsq_A 319 KRLQEQSLQSEPHQYVPLYDIQSQADQPKLIDHIIVFENYPLQDAKNEESSENGFDMVDVHVFEKSNYDLNLMASPG--- 395 (1304)
T ss_dssp HHHHHHHHHHGGGTTSCHHHHHHSSSCSSSCCCEEEECSSCHHHHSCCCHHHHSEEEEEEEECCCCCSSEEEEEECS---
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHhCCCcccceeEEEeecccccccccccccCCceeEeeecccccccCeEEEEecC---
Confidence 999987776655431 112222333444443211100000000000000000000000 0001111
Q ss_pred EEcEEEEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 429 PRPMMYIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 429 ~r~~m~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
..+.+.+.||..+.|-..+.++++.|..+|+
T Consensus 396 --~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~ 426 (1304)
T 2vsq_A 396 --DEMLIKLAYNENVFDEAFILRLKSQLLTAIQ 426 (1304)
T ss_dssp --SSCEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred --CcEEEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 2366899999999999999888888777664
No 136
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=42.59 E-value=24 Score=30.16 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=26.6
Q ss_pred ecCCCeEEEEEee-cCCCccCCCCeEEEEeeCC
Q 036766 145 ASPEAGVIKELVA-KEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 145 ~ap~~G~l~~i~v-~eG~~v~~G~~l~~i~~~~ 176 (470)
..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 31 a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K 63 (131)
T 1hpc_A 31 AQDHLGEVVFVELPEPGVSVTKGKGFGAVESVK 63 (131)
T ss_dssp HHHHHCSEEEEECCCTTCEECBTSEEEEEEESS
T ss_pred hcccCCCceEEEecCCCCEEeCCCEEEEEEecc
Confidence 4566787888877 9999999999999998654
No 137
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=41.81 E-value=15 Score=37.95 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=26.7
Q ss_pred CCceEEEEEEEeCCCCeeeCCCcEEEEEcCCe
Q 036766 109 SITDGTLAKFLKGPGDRVELDEPIAQIETDKV 140 (470)
Q Consensus 109 ~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~ 140 (470)
.+..+.=+.++++.||.|++||+|+.|-+++-
T Consensus 371 ~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 402 (433)
T 1brw_A 371 VIDLAVGIVLHKKIGDRVQKGEALATIHSNRP 402 (433)
T ss_dssp CCCTTCEEEESCCTTCEECTTCEEEEEEESSS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEEcCCc
Confidence 35555668899999999999999999987753
No 138
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=41.57 E-value=15 Score=37.84 Aligned_cols=32 Identities=38% Similarity=0.517 Sum_probs=26.5
Q ss_pred CCceEEEEEEEeCCCCeeeCCCcEEEEEcCCe
Q 036766 109 SITDGTLAKFLKGPGDRVELDEPIAQIETDKV 140 (470)
Q Consensus 109 ~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~ 140 (470)
.+..+.=+.++++.||.|++||+|+.|-+++-
T Consensus 363 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 394 (423)
T 2dsj_A 363 PIDHGVGVYLLKKPGDRVERGEALALVYHRRR 394 (423)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEECSS
T ss_pred CCCcCcCeeeeccCCCEeCCCCeEEEEEeCCc
Confidence 34555568899999999999999999987653
No 139
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=41.04 E-value=2.6e+02 Score=27.16 Aligned_cols=28 Identities=21% Similarity=0.371 Sum_probs=25.8
Q ss_pred EEEEEecccccChHHHHHHHHHHHHHhh
Q 036766 434 YIALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 434 ~lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
.+-+++||-++||+-...|+++|.++.+
T Consensus 119 ~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 119 LIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 3889999999999999999999998876
No 140
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=39.70 E-value=30 Score=34.32 Aligned_cols=39 Identities=23% Similarity=0.266 Sum_probs=31.4
Q ss_pred EcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 136 ETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 136 etdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
+..+...-+.|+.+|.+ +..++.|+.|+.||+|+.+.+.
T Consensus 262 ~~~~~~~~v~A~~~G~~-~~~~~~g~~V~~G~~La~i~d~ 300 (354)
T 3cdx_A 262 MVREADAYVMAPRTGLF-EPTHYVGEEVRTGETAGWIHFV 300 (354)
T ss_dssp ECCCGGGEEECSSCEEE-EESCCTTCEECTTSEEEEEECT
T ss_pred eecCCcEEEECCCCEEE-EEeCCCCCEeCCCCEEEEEECC
Confidence 33345566899999966 5568999999999999999864
No 141
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=39.21 E-value=14 Score=36.18 Aligned_cols=21 Identities=10% Similarity=0.254 Sum_probs=12.7
Q ss_pred EEEEeCCCCeeeCCCcEEEEE
Q 036766 116 AKFLKGPGDRVELDEPIAQIE 136 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~eve 136 (470)
++|.+++|+.|..||+|++|+
T Consensus 73 v~~~~~dG~~v~~g~~l~~v~ 93 (299)
T 2jbm_A 73 VSWFLPEGSKLVPVARVAEVR 93 (299)
T ss_dssp EEESSCTTCEECSSEEEEEEE
T ss_pred EEEEcCCCCCCCCCCEEEEEE
Confidence 345666666666666666655
No 142
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=39.08 E-value=11 Score=33.98 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=10.3
Q ss_pred ecCCCccCCCCeEEEEee
Q 036766 157 AKEGETVEPGTKIAVISK 174 (470)
Q Consensus 157 v~eG~~v~~G~~l~~i~~ 174 (470)
|++||.|+.||+|+.+..
T Consensus 87 V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 87 VSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp CCTTCEECTTCEEEEECS
T ss_pred cCCCCEEcCCCEEEeecC
Confidence 555555666666555543
No 143
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=38.92 E-value=18 Score=37.78 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=25.5
Q ss_pred CceEEEEEEEeCCCCeeeCCCcEEEEEcCCe
Q 036766 110 ITDGTLAKFLKGPGDRVELDEPIAQIETDKV 140 (470)
Q Consensus 110 ~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~ 140 (470)
+..+.=+.++++.||.|++||+|+.|-+++-
T Consensus 407 id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~~ 437 (474)
T 1uou_A 407 LRLGVGAELLVDVGQRLRRGTPWLRVHRDGP 437 (474)
T ss_dssp CCSSCEEEECSCTTCEECTTCEEEEEEESSS
T ss_pred cCCCCceEEEccCCCEECCCCeEEEEEcCCh
Confidence 3444558899999999999999999987643
No 144
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=37.36 E-value=39 Score=30.12 Aligned_cols=42 Identities=12% Similarity=0.173 Sum_probs=32.6
Q ss_pred eeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeCCCC
Q 036766 126 VELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKSGEG 178 (470)
Q Consensus 126 V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~~~ 178 (470)
+++|+.|+.++.. |+-.-..+.+|+.|..|+.||.+.+...+
T Consensus 96 lkkGt~L~lvpae-----------G~~V~~i~~~G~rV~kgd~lA~i~T~KGE 137 (169)
T 3d4r_A 96 LKAGTKLISVPAE-----------GYKVYPIMDFGFRVLKGYRLATLESKKGD 137 (169)
T ss_dssp ECTTCBCEEEEEC-----------SSEEEECCCCSEEECTTCEEEEEECTTCC
T ss_pred EcCCCEEEEEEeC-----------ceEEEEEcCcCcEeccCCeEEEEEecCce
Confidence 6677778888754 44446678999999999999999876543
No 145
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=34.69 E-value=18 Score=37.30 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=26.4
Q ss_pred CCceEEEEEEEeCCCCeeeCCCcEEEEEcCCe
Q 036766 109 SITDGTLAKFLKGPGDRVELDEPIAQIETDKV 140 (470)
Q Consensus 109 ~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~ 140 (470)
-+..+-=+.++++.||.|++||+|+.|-.++.
T Consensus 374 ~id~~~Gi~l~~~~G~~V~~g~~l~~i~~~~~ 405 (436)
T 3h5q_A 374 DIDLAVGIVLNKKIGDKVEEGESLLTIHSNRQ 405 (436)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEESSS
T ss_pred CCCCCCceEEecCCcCEeCCCCeEEEEeCChH
Confidence 45567778999999999999999999984443
No 146
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=31.97 E-value=3.5e+02 Score=25.95 Aligned_cols=68 Identities=12% Similarity=0.040 Sum_probs=44.0
Q ss_pred cccHHHHHHHHHHHHHhhCCccceEEeCCeEEEeecccEEEEEec----------CC-----CeEEEEEEeCCCCCHHHH
Q 036766 296 KLGLMSGFVKAAVSGLQNQPIINAVIDGDDIIYRDYIDISIAVGT----------SK-----GLVVPVIRNADKMNFADI 360 (470)
Q Consensus 296 k~s~~~~lvkA~a~Al~~~P~lN~~i~~~~i~~~~~i~igiAV~~----------~~-----GL~vpvI~~a~~~sl~ei 360 (470)
++|++.+++-|.+.+|.++. ..+. +.+-+|+.++. ++ |.++-.+.-....++.++
T Consensus 234 ~~t~~~~l~aa~~~~l~r~~-----~~~~-----~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~~~~~~~ 303 (422)
T 1q9j_A 234 RLSLNAVVAAAILLTEWQLR-----NTPH-----VPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDL 303 (422)
T ss_dssp TCCHHHHHHHHHHHHHHHHH-----TCSS-----CCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSSCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcc-----cCCC-----ceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCCCCHHHH
Confidence 78999999999999999750 0111 23446666652 11 344444444456799999
Q ss_pred HHHHHHHHHHHhc
Q 036766 361 EKEINTLAKKAND 373 (470)
Q Consensus 361 ~~~i~~l~~~ar~ 373 (470)
.+++++....+.+
T Consensus 304 l~~v~~~~~~~~~ 316 (422)
T 1q9j_A 304 ASDIVATLRADLA 316 (422)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9998887666543
No 147
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=31.86 E-value=50 Score=27.98 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=25.2
Q ss_pred cCCCeEEEEEee-cCCCccCCCCeEEEEeeCC
Q 036766 146 SPEAGVIKELVA-KEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 146 ap~~G~l~~i~v-~eG~~v~~G~~l~~i~~~~ 176 (470)
.+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 33 ~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 64 (128)
T 3a7l_A 33 QELLGDMVFVDLPEVGATVSAGDDCAVAESVK 64 (128)
T ss_dssp HHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred hccCCceEEEEecCCCCEEeCCCEEEEEEecc
Confidence 455677777766 8999999999999998654
No 148
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=31.28 E-value=52 Score=27.84 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=25.3
Q ss_pred ecCCCeEEEEEee-cCCCccCCCCeEEEEeeCC
Q 036766 145 ASPEAGVIKELVA-KEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 145 ~ap~~G~l~~i~v-~eG~~v~~G~~l~~i~~~~ 176 (470)
..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 31 a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 63 (128)
T 1onl_A 31 AQDALGDVVYVELPEVGRVVEKGEAVAVVESVK 63 (128)
T ss_dssp HHHHHCSEEEEECBCTTCEECTTCEEEEEEESS
T ss_pred HhhcCCCceEEEecCCCCEEeCCCEEEEEEEcc
Confidence 3455576777766 9999999999999998654
No 149
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=31.27 E-value=36 Score=30.61 Aligned_cols=21 Identities=14% Similarity=0.238 Sum_probs=14.4
Q ss_pred EEEEeCCCCeeeCCCcEEEEE
Q 036766 116 AKFLKGPGDRVELDEPIAQIE 136 (470)
Q Consensus 116 ~~w~v~~Gd~V~~gd~l~eve 136 (470)
.++.|++||+|++||+|+.+-
T Consensus 83 ~~i~V~~G~~V~~Gq~IG~vG 103 (182)
T 3it5_A 83 DQIQVSNGQQVSADTKLGVYA 103 (182)
T ss_dssp ESCCCCTTCEECTTCEEEEEC
T ss_pred CccccCCCCEEcCCCEEEeec
Confidence 345577777777777777665
No 150
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=29.83 E-value=19 Score=37.22 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=26.8
Q ss_pred CCceEEEEEEEeCCCCeeeCCCcEEEEEcCCe
Q 036766 109 SITDGTLAKFLKGPGDRVELDEPIAQIETDKV 140 (470)
Q Consensus 109 ~~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~ 140 (470)
.+..+.=+.++++.||.|++||+|+.|-+++-
T Consensus 376 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 376 TIDYSVGFTDMARLGDQVDGQRPLAVIHAKDE 407 (440)
T ss_dssp CCCSSCEEESCCCTTCEEBTTBCSEEEEESSH
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEecCCH
Confidence 45556668899999999999999999988753
No 151
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=29.04 E-value=23 Score=34.25 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=16.9
Q ss_pred EeecCCCccCCCCeEEEEeeCC
Q 036766 155 LVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 155 i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|++||.|+.||+|+.+...+
T Consensus 232 i~V~~G~~V~~Gq~IG~vG~tG 253 (282)
T 2hsi_A 232 IDVKLGQQVPRGGVLGKVGATG 253 (282)
T ss_dssp ECSCTTCEECTTCEEEECCCTT
T ss_pred cccCCcCEECCCCEEEEECCCC
Confidence 4678888888888888876544
No 152
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=29.01 E-value=24 Score=34.39 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=17.4
Q ss_pred EeecCCCccCCCCeEEEEeeCC
Q 036766 155 LVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 155 i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|++|+.|..||+|+.+...+
T Consensus 239 i~Vk~Gq~V~~GqvIG~vG~TG 260 (291)
T 1qwy_A 239 LTVSAGDKVKAGDQIAYSGSTG 260 (291)
T ss_dssp ECCCTTCEECTTCEEEECCCCS
T ss_pred cccCCcCEECCCCEEEEECCCC
Confidence 4688888888888888886544
No 153
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=28.58 E-value=23 Score=33.52 Aligned_cols=25 Identities=20% Similarity=0.331 Sum_probs=16.6
Q ss_pred EEEEEEEeCCCCeeeCCCcEEEEEc
Q 036766 113 GTLAKFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 113 g~I~~w~v~~Gd~V~~gd~l~evet 137 (470)
+-+.++.|++||.|++||+|+.+-.
T Consensus 130 ~HL~~i~Vk~Gd~V~~Gq~IG~vG~ 154 (245)
T 3tuf_B 130 QSLSEVSVEQGDKVKQNQVIGKSGK 154 (245)
T ss_dssp EEESEESCCTTCEECTTCEEEECBC
T ss_pred ecCCccccCCCCEECCCCEEEEeCC
Confidence 3444566777777777777777664
No 154
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=27.00 E-value=25 Score=34.17 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=13.9
Q ss_pred EEEEeCCCCeeeCC------CcEEEEE
Q 036766 116 AKFLKGPGDRVELD------EPIAQIE 136 (470)
Q Consensus 116 ~~w~v~~Gd~V~~g------d~l~eve 136 (470)
++|.+++|+.|..| |+|++|+
T Consensus 69 v~~~~~eG~~v~~g~~~~~~~~l~~v~ 95 (294)
T 3c2e_A 69 VEWLFKEGSFLEPSKNDSGKIVVAKIT 95 (294)
T ss_dssp EEESSCTTCEECGGGSSSSCEEEEEEE
T ss_pred EEEEeCCCCEeCCCCCCCCCcEEEEEE
Confidence 45677777777777 6666665
No 155
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=24.86 E-value=52 Score=32.17 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=25.3
Q ss_pred EEEEecccccChHHHHHHHHHHHHHhh
Q 036766 435 IALTYDHRLIDGREAVFFLRRIKDVVE 461 (470)
Q Consensus 435 lsls~DHRviDG~~aa~Fl~~l~~~Le 461 (470)
|.+++||-++||.-...|+++|.++..
T Consensus 118 l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 118 LTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp EEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 889999999999999999999998875
No 156
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=24.06 E-value=32 Score=32.69 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=12.9
Q ss_pred eecCCCccCCCCeEEEEeeCC
Q 036766 156 VAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 156 ~v~eG~~v~~G~~l~~i~~~~ 176 (470)
.|++||.|..||+|+.+...+
T Consensus 183 ~V~~G~~V~~Gq~IG~vG~tG 203 (252)
T 3nyy_A 183 ELEKGDPVKAGDLLGYMGDSG 203 (252)
T ss_dssp SCCTTCEECTTCEEEECBCCC
T ss_pred cCCCCCEECCCCEEEEECCCC
Confidence 456666666666666665443
No 157
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=23.25 E-value=72 Score=31.10 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=29.0
Q ss_pred eeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 141 TIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 141 ~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
..-+.|+..|.+. -.++.|+.|+.|++|+.+.+.
T Consensus 257 ~~~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~dp 290 (332)
T 2qj8_A 257 SDQLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHPM 290 (332)
T ss_dssp GGEEECSSSEEEE-ECSCTTCEECTTCEEEEEECT
T ss_pred ceEEeCCCCeEEE-EeCCCCCEeCCCCEEEEEECC
Confidence 3457899999886 678899999999999999764
No 158
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=23.05 E-value=10 Score=30.07 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=13.1
Q ss_pred EeCCCCeeeCCCcEE
Q 036766 119 LKGPGDRVELDEPIA 133 (470)
Q Consensus 119 ~v~~Gd~V~~gd~l~ 133 (470)
+|++||.|++||.|.
T Consensus 68 ~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 68 NVFEGERVERGDVIS 82 (84)
T ss_dssp SSCTTEEECBSCSSB
T ss_pred EeCCCCEECCCCCcc
Confidence 689999999999874
No 159
>1hcz_A Cytochrome F; electron transport, photosynthesis, cytochrome B6F complex, chloroplast transmembrane; HET: HEM; 1.96A {Brassica rapa} SCOP: b.2.6.1 b.84.2.2 PDB: 1tkw_B* 1ctm_A* 2pcf_B*
Probab=22.51 E-value=1.1e+02 Score=28.72 Aligned_cols=51 Identities=25% Similarity=0.386 Sum_probs=27.4
Q ss_pred ceEEEEEEEeCCCCeeeCCCcEEEEEcCC---eeeeEecCCCeEEEEEeecCCCccCCCCeEE
Q 036766 111 TDGTLAKFLKGPGDRVELDEPIAQIETDK---VTIDVASPEAGVIKELVAKEGETVEPGTKIA 170 (470)
Q Consensus 111 ~eg~I~~w~v~~Gd~V~~gd~l~evetdK---~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~ 170 (470)
..|+|.++..+ ++|.-...|++.. ...+. -|... +++|.+||.|+.|++|-
T Consensus 175 ~~G~I~~I~~~-----ekgg~~vtI~~~~~G~~v~~~-iP~Gp---eLiV~~G~~v~~~qpLT 228 (252)
T 1hcz_A 175 AGGIISKILRK-----EKGGYEITIVDASNERQVIDI-IPRGL---ELLVSEGESIKLDQPLT 228 (252)
T ss_dssp SCEEEEEEEEC-----TTSCEEEEEEETTTTEEEEEE-ECTTC---CBCCCTTCEECTTCBSB
T ss_pred CCcEEEEEEEc-----CCCCEEEEEecCCCCCEEEEe-cCCCC---eEEEecCCEEecCCccc
Confidence 45777777664 2455555565443 22221 11111 34677788777777763
No 160
>3mfy_A V-type ATP synthase alpha chain; A-type ATP synthase, P loop, phenylalanine mutant, hydrolase; 2.35A {Pyrococcus horikoshii} PDB: 3i4l_A* 3i72_A 3i73_A* 3p20_A 3ikj_A 3qg1_A 3nd8_A 3nd9_A 1vdz_A 3qia_A 3qjy_A 3m4y_A 3se0_A 3sdz_A
Probab=21.81 E-value=1.3e+02 Score=32.01 Aligned_cols=55 Identities=22% Similarity=0.290 Sum_probs=39.4
Q ss_pred EeCCCCeeeCCCcEEEEEcCC-eeeeE--ecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 119 LKGPGDRVELDEPIAQIETDK-VTIDV--ASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 119 ~v~~Gd~V~~gd~l~evetdK-~~~~i--~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
.+++||.|..||.+..|.-.. .+..| +....|+|.++ +.+|+ ..+-++++.++..
T Consensus 123 ~~~~gd~v~~G~i~g~v~e~~~~~~~imvpp~~~g~v~~i-~~~g~-~~v~~~i~~i~~~ 180 (588)
T 3mfy_A 123 KAKVGDKVVGGDIIGEVPETSIIVHKIMVPPGIEGEIVEI-AEEGD-YTIEEVIAKVKTP 180 (588)
T ss_dssp CCCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE-CCSEE-ECTTSEEEEEECT
T ss_pred ccccCcccccCceEEEEecccceeeeeecCCCCCceEEEe-ccCCc-ccccceEEEEecC
Confidence 478999999999999886332 33433 44578988774 45554 5778899988753
No 161
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=20.81 E-value=20 Score=35.52 Aligned_cols=35 Identities=11% Similarity=-0.123 Sum_probs=23.7
Q ss_pred EeCCCCeeeCCCcEEEEEcCC-----eeeeEecCCCeEEE
Q 036766 119 LKGPGDRVELDEPIAQIETDK-----VTIDVASPEAGVIK 153 (470)
Q Consensus 119 ~v~~Gd~V~~gd~l~evetdK-----~~~~i~ap~~G~l~ 153 (470)
.++.|+.|++||+|+++-... ...+|.+|.+|+|.
T Consensus 278 ~~~~g~~V~~G~~La~i~d~~~~~g~~~~~i~aP~~Gvv~ 317 (341)
T 1yw4_A 278 SVENFTLLPDGMLIAEDGAVRYQATGGEERILFPNPAVKP 317 (341)
T ss_dssp TCCBTEECCSSCCCC--------CCSSCCEEESCCTTCCS
T ss_pred cCCCcCEeCCCCEEEEECCCceEeCCCceEEEeCCCCcee
Confidence 358899999999999876432 34468999999773
No 162
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=20.79 E-value=41 Score=33.47 Aligned_cols=22 Identities=36% Similarity=0.684 Sum_probs=18.3
Q ss_pred EeecCCCccCCCCeEEEEeeCC
Q 036766 155 LVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 155 i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+.|++|+.|..||+|+.+...+
T Consensus 284 ~~v~~G~~V~~G~~Ig~~G~tg 305 (361)
T 2gu1_A 284 ILVKKGQLVKRGQKIALAGATG 305 (361)
T ss_dssp ECCCTTCEECTTCEEEECCCCS
T ss_pred cccCCcCEECCCCEEEEECCCC
Confidence 4688999999999999887554
No 163
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=20.51 E-value=1.5e+02 Score=31.57 Aligned_cols=54 Identities=17% Similarity=0.314 Sum_probs=40.3
Q ss_pred eCCCCeeeCCCcEEEEEcCC-eeeeE--ecCCCeEEEEEeecCCCccCCCCeEEEEeeCC
Q 036766 120 KGPGDRVELDEPIAQIETDK-VTIDV--ASPEAGVIKELVAKEGETVEPGTKIAVISKSG 176 (470)
Q Consensus 120 v~~Gd~V~~gd~l~evetdK-~~~~i--~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~~ 176 (470)
+++||.|..||.+.+|.-.. ....| +....|+|..+ .+|+ ..+-++++.++..+
T Consensus 131 ~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g~-~~v~~~v~~i~~~~ 187 (600)
T 3vr4_A 131 IEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESGS-FTIDDPICVIETEQ 187 (600)
T ss_dssp SCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCEE-ECTTSCCEEEEETT
T ss_pred cccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCCc-ceeceeEEEEeccC
Confidence 79999999999999987443 33444 44468999887 5554 57888999987543
No 164
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=20.44 E-value=1.2e+02 Score=28.48 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=38.7
Q ss_pred CceEEEEEEEeCCCCeeeCCCcEEEEEcCCeeeeEecCCCeEEEEEeecCCCccCCCCeEEEEeeC
Q 036766 110 ITDGTLAKFLKGPGDRVELDEPIAQIETDKVTIDVASPEAGVIKELVAKEGETVEPGTKIAVISKS 175 (470)
Q Consensus 110 ~~eg~I~~w~v~~Gd~V~~gd~l~evetdK~~~~i~ap~~G~l~~i~v~eG~~v~~G~~l~~i~~~ 175 (470)
...|+|+.+....| .-..+.|+.......+.+. |.++.|++|+.|..|++|+.+...
T Consensus 99 ~~~G~V~~~g~~~~-----~G~~ViI~Hg~G~~t~Y~H----L~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 99 SLSGTVVKAEKDPV-----LGYVVEVEHADGLSTVYQS----LSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp SSCEEEEEEEEETT-----TEEEEEEECSTTEEEEEEE----ESEESCCTTCEECTTCEEEECBCC
T ss_pred CcCeEEEEEEecCC-----CceEEEEEeCCCEEEEEec----CCccccCCCCEECCCCEEEEeCCc
Confidence 45788887754432 2235566665544444443 447789999999999999999765
No 165
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=20.43 E-value=26 Score=34.63 Aligned_cols=21 Identities=5% Similarity=0.121 Sum_probs=15.2
Q ss_pred EEEeCCCCeeeCCCcEEEEEc
Q 036766 117 KFLKGPGDRVELDEPIAQIET 137 (470)
Q Consensus 117 ~w~v~~Gd~V~~gd~l~evet 137 (470)
++.|++||.|++||+|+.+-+
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G~ 270 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTGI 270 (334)
T ss_dssp SCCCCTTCEECTTSEEEECBC
T ss_pred cccCCCcCEECCCCEEEeecC
Confidence 345788888888888877653
Done!