Query 036769
Match_columns 306
No_of_seqs 168 out of 636
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 05:18:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036769.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036769hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12819 Malectin_like: Carboh 100.0 3.5E-46 7.6E-51 358.6 23.6 235 40-305 1-256 (347)
2 PLN03150 hypothetical protein; 100.0 5.4E-45 1.2E-49 374.0 26.1 253 19-306 7-273 (623)
3 PF11721 Malectin: Di-glucose 99.9 3.5E-21 7.6E-26 168.6 11.2 141 37-182 2-174 (174)
4 PLN03150 hypothetical protein; 99.8 3.3E-20 7.1E-25 191.0 15.8 147 36-187 192-362 (623)
5 PF12819 Malectin_like: Carboh 99.7 3.6E-16 7.8E-21 150.7 13.1 150 34-186 177-346 (347)
6 KOG3593 Predicted receptor-lik 96.7 0.0022 4.7E-08 60.3 5.0 107 36-145 60-169 (355)
7 PF11721 Malectin: Di-glucose 94.5 0.0099 2.1E-07 52.0 -0.2 61 223-287 2-64 (174)
8 PF03944 Endotoxin_C: delta en 55.3 1.2E+02 0.0027 25.3 12.4 84 97-187 41-142 (143)
9 PF09680 Tiny_TM_bacill: Prote 23.0 87 0.0019 18.7 2.1 15 13-27 5-19 (24)
10 PHA00527 hypothetical protein 17.6 40 0.00086 27.4 -0.2 17 1-17 1-17 (129)
No 1
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=3.5e-46 Score=358.60 Aligned_cols=235 Identities=32% Similarity=0.549 Sum_probs=179.0
Q ss_pred EeeCCCCccC-----CCCceeeCCCCCCccccc-CCccceecC-C-CCCCChhhccceeecC--CCceEEEecCC--CCe
Q 036769 40 INCGSDTEVT-----SGNRIFRGDRNSDSISFS-EPSYPVKNS-S-QLPDTLALYQTARVFD--QSSHYEFDISS--NGT 107 (306)
Q Consensus 40 InCG~~~~~~-----~~gr~W~~D~~~~~~y~~-~~~~~v~~~-~-~~~~~~~~Y~TaR~F~--~~~~Y~fpv~~--~G~ 107 (306)
||||++.+.. ..||+|++|.+ |+. |.+..+... + .....+++|+|||+|+ ...||+|++.+ +++
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~----~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~ 76 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDD----FIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGK 76 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCC----cccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCce
Confidence 7999986632 34999999995 776 654444211 1 1124578999999999 45899999973 349
Q ss_pred EEEEEEEeccccCCC-----CcCeeEEEEECCceEEEEeeeecCCCCCcEEEEEEEeec-CCeEEEEEEecC-CCceeEE
Q 036769 108 HLVRLHFFAFSSAKN-----LYNAVFNVSTSHPFLLLHNFNVQNSSQSPVIKDFFLSIT-QGKFCVYFRPQE-SSFAFVS 180 (306)
Q Consensus 108 YlVRLhF~~~~~~~~-----~~~~~FdV~i~~~~~ll~~f~v~~~~~~~~~kEf~v~v~-~~~L~I~f~P~~-~~~aFIN 180 (306)
|||||||+|++|++. .+.+.||++++. ..|..+++......+++|||+++++ ++.|.|||+|.. +.+||||
T Consensus 77 yliRl~F~~gnyd~~~fs~~~~~~~FdL~~~~--n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIs 154 (347)
T PF12819_consen 77 YLIRLHFYYGNYDGLNFSVSSSPPTFDLLLGF--NFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFIS 154 (347)
T ss_pred EEEEEEeccccccccccccccCCcceEEEECC--ceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCcee
Confidence 999999999999962 236779999998 6677776653223579999999998 799999999998 4569999
Q ss_pred eeeeeecCCCCCCCCCCCCCCcccCCccCCCCCCCcccceeeEEEEeecCCc--cCCCCCCCCCCcCCCCCCcccCCCCe
Q 036769 181 AIEVFVVDPLPLSSIPDNGPHVSPIGTKTNSYPGIHPKALQTIYRINVGGPM--ISQENDTLGRNWIPDDRYLYNPDTAK 258 (306)
Q Consensus 181 aIEI~~~~~lp~~ly~~~~~~~~~~~~~~~~~~~~~~~aL~t~~RlNvGg~~--I~~~~D~~~R~W~~D~~yl~~~~~~~ 258 (306)
||||++ ||+++|++. ...++.|||++||+||||+. |++++|++||+|.+ |. ......
T Consensus 155 aiEl~~---lp~~ly~~~--------------~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~---~~-~~~~~~ 213 (347)
T PF12819_consen 155 AIELRP---LPDSLYPDT--------------DANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQP---YS-SSPGWS 213 (347)
T ss_pred EEEEEE---CCccceecc--------------ccCCCceeEEEEeecCCCcccccCCCCCcceeeccc---cc-cCcccc
Confidence 999999 999999531 12357899999999999998 99999999999994 31 111122
Q ss_pred eeccceeeeecCCCCCCCChHHHHHHHhhcccCCCCCCCceeEeEEe
Q 036769 259 IVGPIANLNYLGIASEYTAPDSVYQTAKHMNKNNSRLSNNFNITWCF 305 (306)
Q Consensus 259 ~~~~~~~i~y~~~~~~~~aP~~VY~TA~~m~~~~~~~~~~~nltW~f 305 (306)
..+...+|++....++|.||..||+||++|++. + . ++|+||.|
T Consensus 214 ~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~-s-~--~~nltw~~ 256 (347)
T PF12819_consen 214 NISTTSNININSSNNPYDAPSAVYQTARTPSNS-S-D--PLNLTWSF 256 (347)
T ss_pred ccccceeeecccCCccCcChHHHHHhhhccccc-c-c--ceEEEecc
Confidence 222334465333457899999999999999977 4 2 49999987
No 2
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=5.4e-45 Score=373.95 Aligned_cols=253 Identities=16% Similarity=0.173 Sum_probs=188.6
Q ss_pred HHHHHHhhhhccccCCCceEEEeeCCCCccC--CCCceeeCCCCCCcccccCCccceecCCCCCCChhhccceeecCC--
Q 036769 19 LLHLLSVGLNCAAYSLPEKYFINCGSDTEVT--SGNRIFRGDRNSDSISFSEPSYPVKNSSQLPDTLALYQTARVFDQ-- 94 (306)
Q Consensus 19 ~l~~~~~~~~~~~~~p~~~~~InCG~~~~~~--~~gr~W~~D~~~~~~y~~~~~~~v~~~~~~~~~~~~Y~TaR~F~~-- 94 (306)
++..+++++.++....+++|+||||++.+++ .+||+|++|.. |..+....+. .++ ..+++|+|+|+|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~----~~~~~~~~~~--~~~-~~~~~~~t~R~F~~~~ 79 (623)
T PLN03150 7 AASALLAVLASLASPEPFTMRISCGARVNVRTAPTNTLWYKDFA----YTGGIPANAT--RPS-FIAPPLKTLRYFPLSD 79 (623)
T ss_pred HHHHHHHhhcccccCCCccEEEeCCCCCCcccCCCCCEEcCCcc----cccCcccccc--Ccc-cccchhhccccCCccc
Confidence 3334443444444445789999999998763 68999999963 4322221111 122 34678999999996
Q ss_pred --CceEEEecCCCCeEEEEEEEeccccCCCCcCeeEEEEECCc--eEEEEeeeecCCCCCcEEEEEEEeecCCeEEEEEE
Q 036769 95 --SSHYEFDISSNGTHLVRLHFFAFSSAKNLYNAVFNVSTSHP--FLLLHNFNVQNSSQSPVIKDFFLSITQGKFCVYFR 170 (306)
Q Consensus 95 --~~~Y~fpv~~~G~YlVRLhF~~~~~~~~~~~~~FdV~i~~~--~~ll~~f~v~~~~~~~~~kEf~v~v~~~~L~I~f~ 170 (306)
..||+||+.++|+|+|||||+|++|++....+.|||+++++ .+++.+|+. ....++||+++.++++.|.|||.
T Consensus 80 g~~~cY~~~~~~~g~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~---~~~~v~~E~i~~~~~~~l~vcf~ 156 (623)
T PLN03150 80 GPENCYNINRVPKGHYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSS---HDEQVFAEALVFLTDGSASICFH 156 (623)
T ss_pred ccccceEeeecCCCcEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCccc---CCCcEEEEEEEEecCCcEEEEEe
Confidence 56999999878999999999999998822678999999994 123333432 24568999999999999999999
Q ss_pred ecCCCceeEEeeeeeecCCCCCCCCCCCCCCcccCCccCCCCCCCcccceeeEEEEeecCCc----cCCCCCCC--CCCc
Q 036769 171 PQESSFAFVSAIEVFVVDPLPLSSIPDNGPHVSPIGTKTNSYPGIHPKALQTIYRINVGGPM----ISQENDTL--GRNW 244 (306)
Q Consensus 171 P~~~~~aFINaIEI~~~~~lp~~ly~~~~~~~~~~~~~~~~~~~~~~~aL~t~~RlNvGg~~----I~~~~D~~--~R~W 244 (306)
|..++.||||||||++ ||+++|... + + .....+||++||+||||++ +++++|.+ ||+|
T Consensus 157 ~~~~~~pFIs~iEv~~---l~~~~y~~~-----~-----~---~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W 220 (623)
T PLN03150 157 STGHGDPAILSIEILQ---VDDKAYNFG-----P-----S---WGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFW 220 (623)
T ss_pred cCCCCCCceeEEEEEE---cCccccccc-----c-----c---ccCceEEEEEEEEEecCcccccccCCCCCcccCcccc
Confidence 9888899999999999 999999521 0 0 1136679999999999974 67888887 9999
Q ss_pred CCCCCCcccCCCCeeeccceeeeecCCCCCCCChHHHHHHHhhcccCCCCCCCceeEeEEeC
Q 036769 245 IPDDRYLYNPDTAKIVGPIANLNYLGIASEYTAPDSVYQTAKHMNKNNSRLSNNFNITWCFM 306 (306)
Q Consensus 245 ~~D~~yl~~~~~~~~~~~~~~i~y~~~~~~~~aP~~VY~TA~~m~~~~~~~~~~~nltW~f~ 306 (306)
.+|++|+.+. ....+....|++++ .+.+.||+.||+|||+|... . .|+||.|+
T Consensus 221 ~~d~~~~~~~--~~~~st~~~I~~~~-~~~~~~P~~VyqTA~~~~~~-~-----~~lty~~~ 273 (623)
T PLN03150 221 NRMQTFGSGS--DQAISTENVIKKAS-NAPNFYPESLYQSALVSTDT-Q-----PDLSYTMD 273 (623)
T ss_pred CcCcccCCCc--cccccccccccccc-CCCccChHHHhhhhccccCC-C-----CceEEEee
Confidence 9999998443 22233556787753 36789999999999988753 2 57899874
No 3
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.85 E-value=3.5e-21 Score=168.61 Aligned_cols=141 Identities=24% Similarity=0.286 Sum_probs=91.3
Q ss_pred eEEEeeCCCCccCCCCceeeCCCCCCcccccCCc------------cceecCCCCCCChhhccceeecCCCceEEEecCC
Q 036769 37 KYFINCGSDTEVTSGNRIFRGDRNSDSISFSEPS------------YPVKNSSQLPDTLALYQTARVFDQSSHYEFDISS 104 (306)
Q Consensus 37 ~~~InCG~~~~~~~~gr~W~~D~~~~~~y~~~~~------------~~v~~~~~~~~~~~~Y~TaR~F~~~~~Y~fpv~~ 104 (306)
.++||||++...+..|..|.+|.. |..+.. .........+..+.+|+|+|.-+.+++|.+|+.+
T Consensus 2 ~~~IN~Gg~~~~~~~g~~w~~D~~----~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~~f~Y~ip~~~ 77 (174)
T PF11721_consen 2 VLRINAGGPAYTDSSGIVWEADQY----YTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPSSFSYDIPVVP 77 (174)
T ss_dssp EEEEEETSSSEEETTTEEE-SSSS----STTSS-----------SSTTS--TTS-HHHHHTTT-----SSSEEEEEE--S
T ss_pred EEEEECCCCcccCCCCCEEcCCCC----CCCCCcccccccccccccccccccccCCCchhhhHhhcCCCCceEEEEecCC
Confidence 489999999876678999999984 322211 0111111222346899999997668899999556
Q ss_pred CCeEEEEEEEeccccCC-----CCcCeeEEEEECCceEEEEeeeec--CC-CCCcEEEEE-EEeecCCeEEEEEEecC--
Q 036769 105 NGTHLVRLHFFAFSSAK-----NLYNAVFNVSTSHPFLLLHNFNVQ--NS-SQSPVIKDF-FLSITQGKFCVYFRPQE-- 173 (306)
Q Consensus 105 ~G~YlVRLhF~~~~~~~-----~~~~~~FdV~i~~~~~ll~~f~v~--~~-~~~~~~kEf-~v~v~~~~L~I~f~P~~-- 173 (306)
+|.|.|||||+|..+.. ..++|+|||+++| .+++++||+. ++ ...+++++| .+.++++.|.|+|.+..
T Consensus 78 ~G~Y~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g-~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg~L~i~f~~~~~~ 156 (174)
T PF11721_consen 78 NGTYTVRLHFAELYFGASGGASGPGQRVFDVYVNG-ETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDGTLNIQFVWAGKG 156 (174)
T ss_dssp -EEEEEEEEEE-SSS--------SSSS-EEEEETT-EEEEEEE-HHHHHSSSS---EEEEEEEEEETTEEETTEEEE--S
T ss_pred CcEEEEEEEeccccccccccccCCCceEEEEEecc-eEEEeccCHHHHcCCCceEEEEEEEEEEEeCCcEEEEEEecCCC
Confidence 99999999999997763 3789999999999 9999999998 22 334788888 67889999999999422
Q ss_pred ---------CCceeEEee
Q 036769 174 ---------SSFAFVSAI 182 (306)
Q Consensus 174 ---------~~~aFINaI 182 (306)
...|.||||
T Consensus 157 ~~~i~~~~~~~~p~IsaI 174 (174)
T PF11721_consen 157 TLCIPFIGSYGNPLISAI 174 (174)
T ss_dssp EEEEEEESSSSSSSEEEE
T ss_pred cEEeeccccCCCcEEeeC
Confidence 234777776
No 4
>PLN03150 hypothetical protein; Provisional
Probab=99.84 E-value=3.3e-20 Score=190.96 Aligned_cols=147 Identities=19% Similarity=0.299 Sum_probs=114.1
Q ss_pred ceEEEeeCCCCcc---CC------CCceeeCCCCCCcccccC------Cccceec--CCCCCCChhhccceeecCC---C
Q 036769 36 EKYFINCGSDTEV---TS------GNRIFRGDRNSDSISFSE------PSYPVKN--SSQLPDTLALYQTARVFDQ---S 95 (306)
Q Consensus 36 ~~~~InCG~~~~~---~~------~gr~W~~D~~~~~~y~~~------~~~~v~~--~~~~~~~~~~Y~TaR~F~~---~ 95 (306)
..+|||||+.... +. .+|.|.+|.. |..+ ....+.. ..+..+|+.+|+|||.+.. +
T Consensus 192 ~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~----~~~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~ 267 (623)
T PLN03150 192 TAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQT----FGSGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPD 267 (623)
T ss_pred EEEEEEecCcccccccCCCCCcccCccccCcCcc----cCCCcccccccccccccccCCCccChHHHhhhhccccCCCCc
Confidence 4679999987432 22 2699999964 4321 1111221 1233467889999999875 4
Q ss_pred ceEEEecCCCCeEEEEEEEeccccCC-CCcCeeEEEEECCceEEEEeeeecC---CCCCcEEEEEEEeecCCeEEEEEEe
Q 036769 96 SHYEFDISSNGTHLVRLHFFAFSSAK-NLYNAVFNVSTSHPFLLLHNFNVQN---SSQSPVIKDFFLSITQGKFCVYFRP 171 (306)
Q Consensus 96 ~~Y~fpv~~~G~YlVRLhF~~~~~~~-~~~~~~FdV~i~~~~~ll~~f~v~~---~~~~~~~kEf~v~v~~~~L~I~f~P 171 (306)
.+|.|+|+++|.|+|||||||+.... ..+.|+|+|++|| ..++++|++.. ....++++||.+.++++.|+|+|+|
T Consensus 268 lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing-~~~~~~~di~~~~g~~~~~~~~~~~v~~~~g~l~isl~p 346 (623)
T PLN03150 268 LSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLING-DTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQP 346 (623)
T ss_pred eEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECC-EEeecccChhhhcCCcccceEEEeEEeecCCeEEEEEee
Confidence 79999998778999999999997543 5678999999999 89999999852 2457899999999888999999999
Q ss_pred cCCCceeEEeeeeeec
Q 036769 172 QESSFAFVSAIEVFVV 187 (306)
Q Consensus 172 ~~~~~aFINaIEI~~~ 187 (306)
..++.||||||||+++
T Consensus 347 ~~~s~pilNaiEI~~~ 362 (623)
T PLN03150 347 KKGTHAIINAIEVFEI 362 (623)
T ss_pred CCCCcceeeeeeeeec
Confidence 8877899999999993
No 5
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=99.68 E-value=3.6e-16 Score=150.67 Aligned_cols=150 Identities=21% Similarity=0.306 Sum_probs=105.1
Q ss_pred CCceEEEeeCCCC--cc---CCCCceeeCCCCCCccccc-CCcccee-c--CCCCCCChhhccceeecCCC-----ceEE
Q 036769 34 LPEKYFINCGSDT--EV---TSGNRIFRGDRNSDSISFS-EPSYPVK-N--SSQLPDTLALYQTARVFDQS-----SHYE 99 (306)
Q Consensus 34 p~~~~~InCG~~~--~~---~~~gr~W~~D~~~~~~y~~-~~~~~v~-~--~~~~~~~~~~Y~TaR~F~~~-----~~Y~ 99 (306)
....+|+|||++. .. |..+|.|.+..... .... .....+. . .+...+|..+|+|||..... ++|.
T Consensus 177 L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~-~~~~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw~ 255 (347)
T PF12819_consen 177 LETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSSP-GWSNISTTSNININSSNNPYDAPSAVYQTARTPSNSSDPLNLTWS 255 (347)
T ss_pred eEEEEeecCCCcccccCCCCCcceeeccccccCc-cccccccceeeecccCCccCcChHHHHHhhhcccccccceEEEec
Confidence 4468899999886 32 34589999632100 1111 1111232 1 12335788999999997643 4888
Q ss_pred EecCCCCeEEEEEEEeccccCC-CCcCeeEEEEECCceEEEEeeeec--CCCCCcEEEEEEEeec-CCeEEEEEEecCCC
Q 036769 100 FDISSNGTHLVRLHFFAFSSAK-NLYNAVFNVSTSHPFLLLHNFNVQ--NSSQSPVIKDFFLSIT-QGKFCVYFRPQESS 175 (306)
Q Consensus 100 fpv~~~G~YlVRLhF~~~~~~~-~~~~~~FdV~i~~~~~ll~~f~v~--~~~~~~~~kEf~v~v~-~~~L~I~f~P~~~~ 175 (306)
| +++.-.|+|||||||+.... ..+.|.|+|++|+ ..+.++++.. .....+++++|++.++ ++.+.|+++|..++
T Consensus 256 ~-~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~isL~~t~~S 333 (347)
T PF12819_consen 256 F-VDPGFSYYVRLHFAEIQSLSPNNNQREFDIYING-QTAYSDVSPPYLGADTVPYYSDYVVNVPDSGFLNISLGPTPDS 333 (347)
T ss_pred c-CCCCccEEEEEEEeecccccCCCCeEEEEEEECC-eEccCccCcccccCcceEeecceEEEecCCCEEEEEEEeCCCC
Confidence 8 77444999999999998754 4557999999999 6666655542 2345567899999876 45799999998765
Q ss_pred --ceeEEeeeeee
Q 036769 176 --FAFVSAIEVFV 186 (306)
Q Consensus 176 --~aFINaIEI~~ 186 (306)
.|+|||+||++
T Consensus 334 ~lppiLNalEIy~ 346 (347)
T PF12819_consen 334 TLPPILNALEIYK 346 (347)
T ss_pred CcCceeEeeeeEe
Confidence 49999999998
No 6
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]
Probab=96.73 E-value=0.0022 Score=60.33 Aligned_cols=107 Identities=20% Similarity=0.245 Sum_probs=76.4
Q ss_pred ceEEEeeCCCCccCCCCceeeCCCCCCccccc--CCccceecCCCCCCChhhccceeecCCCceEEEecCCCCeEEEEEE
Q 036769 36 EKYFINCGSDTEVTSGNRIFRGDRNSDSISFS--EPSYPVKNSSQLPDTLALYQTARVFDQSSHYEFDISSNGTHLVRLH 113 (306)
Q Consensus 36 ~~~~InCG~~~~~~~~gr~W~~D~~~~~~y~~--~~~~~v~~~~~~~~~~~~Y~TaR~F~~~~~Y~fpv~~~G~YlVRLh 113 (306)
-.+-||||+..-++..|.+|..|.-...+-.+ |.-..+.-. .......+|+|+|+-...+.|..|++..|.|-+=|.
T Consensus 60 vI~aVncGgdaavd~ygI~f~aD~~~~VGrasd~G~~l~i~~r-aeeed~ily~ter~neetFgyd~pik~dgdyalvlk 138 (355)
T KOG3593|consen 60 VIPAVNCGGDAAVDNYGIRFAADPLEGVGRASDYGMVLGIGCR-AEEEDIILYQTERYNEETFGYDVPIKEDGDYALVLK 138 (355)
T ss_pred hhheeccCChhhhcccceEeeccccccccccCCccceeecccc-CChhhhhhhhhcccchhhhcccccccCCCceehhhh
Confidence 45679999998777789999988632100000 111111100 011235699999997667889999998899999999
Q ss_pred EeccccCCCCcCeeEEEEEC-CceEEEEeeeec
Q 036769 114 FFAFSSAKNLYNAVFNVSTS-HPFLLLHNFNVQ 145 (306)
Q Consensus 114 F~~~~~~~~~~~~~FdV~i~-~~~~ll~~f~v~ 145 (306)
|++..|+ ....-+|||.+| + ++++++.++.
T Consensus 139 faevyF~-~~q~kvfdvrln~s-h~vVk~ldi~ 169 (355)
T KOG3593|consen 139 FAEVYFK-TCQHKVFDVRLNCS-HCVVKALDIF 169 (355)
T ss_pred HHHHHHH-hhhhhheeeeeccc-eeEEeccchh
Confidence 9999887 456679999999 6 8999998887
No 7
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=94.46 E-value=0.0099 Score=52.01 Aligned_cols=61 Identities=26% Similarity=0.316 Sum_probs=31.9
Q ss_pred EEEEeecCCccCCCCCCCCCCcCCCCCCcccCCCC-eeec-cceeeeecCCCCCCCChHHHHHHHhh
Q 036769 223 IYRINVGGPMISQENDTLGRNWIPDDRYLYNPDTA-KIVG-PIANLNYLGIASEYTAPDSVYQTAKH 287 (306)
Q Consensus 223 ~~RlNvGg~~I~~~~D~~~R~W~~D~~yl~~~~~~-~~~~-~~~~i~y~~~~~~~~aP~~VY~TA~~ 287 (306)
++|||+||+.. .|...+.|.+|..|.-+...- .... ...... ....-..+.+..+|+|+|.
T Consensus 2 ~~~IN~Gg~~~---~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~-~~~~i~~t~d~~Lyqt~R~ 64 (174)
T PF11721_consen 2 VLRINAGGPAY---TDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSS-TNSSIPGTTDDPLYQTERY 64 (174)
T ss_dssp EEEEEETSSSE---EETTTEEE-SSSSSTTSS-----------SSTT-S--TTS-HHHHHTTT----
T ss_pred EEEEECCCCcc---cCCCCCEEcCCCCCCCCCccccccccccccccc-ccccccCCCchhhhHhhcC
Confidence 69999999987 677889999999997555410 0000 000000 0011124668899999995
No 8
>PF03944 Endotoxin_C: delta endotoxin; InterPro: IPR005638 This family contains insecticidal toxins produced by Bacillus species of bacteria. During spore formation the bacteria produce crystals of this protein. When an insect ingests these proteins, they are activated by proteolytic cleavage. The N terminus is cleaved in all of the proteins and a C-terminal extension is cleaved in some members. Once activated, the endotoxin binds to the gut epithelium and causes cell lysis by the formation of cation-selective channels, which leads to death. The activated region of the delta toxin is composed of three distinct structural domains: an N-terminal helical bundle domain (IPR005639 from INTERPRO) involved in membrane insertion and pore formation; a beta-sheet central domain (IPR001178 from INTERPRO) involved in receptor binding; and a C-terminal beta-sandwich domain that interacts with the N-terminal domain to form a channel [, ]. This entry represents the conserved C-terminal domain.; PDB: 1DLC_A 1JI6_A 1W99_A 1CIY_A 1I5P_A 2C9K_A 3EB7_A.
Probab=55.33 E-value=1.2e+02 Score=25.25 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=44.7
Q ss_pred eEEEe--cCCCCeEEEEEEEeccccCCCCcCeeEEEEECCceEEEEeeeecC---C-------CCCcEEEEEE--EeecC
Q 036769 97 HYEFD--ISSNGTHLVRLHFFAFSSAKNLYNAVFNVSTSHPFLLLHNFNVQN---S-------SQSPVIKDFF--LSITQ 162 (306)
Q Consensus 97 ~Y~fp--v~~~G~YlVRLhF~~~~~~~~~~~~~FdV~i~~~~~ll~~f~v~~---~-------~~~~~~kEf~--v~v~~ 162 (306)
.+.+. -....+|.||+.++- .+...+.+.+++ ......+++.. . -...-+.|+. +....
T Consensus 41 ~~~v~~~~~~~~~YrIRiRYAs------~~~~~~~i~~~~-~~~~~~~~~~~T~~~~~~~~~~y~~F~y~~~~~~~~~~~ 113 (143)
T PF03944_consen 41 KIRVTINNSSSQKYRIRIRYAS------NSNGTLSISINN-SSGNLSFNFPSTMSNGDNLTLNYESFQYVEFPTPFTFSS 113 (143)
T ss_dssp EEEEEESSSSTEEEEEEEEEEE------SS-EEEEEEETT-EEEECEEEE--SSSTTGGCCETGGG-EEEEESSEEEEST
T ss_pred EEEEEecCCCCceEEEEEEEEE------CCCcEEEEEECC-ccceeeeeccccccCCCccccccceeEeeecCceEEecC
Confidence 44444 334569999999883 234567777777 22211344431 0 1123455653 22333
Q ss_pred Ce---EEEEEEecCC-CceeEEeeeeeec
Q 036769 163 GK---FCVYFRPQES-SFAFVSAIEVFVV 187 (306)
Q Consensus 163 ~~---L~I~f~P~~~-~~aFINaIEI~~~ 187 (306)
.. +.|.+....+ +.=+|--||.+||
T Consensus 114 ~~~~~~~i~i~~~~~~~~v~IDkIEFIPv 142 (143)
T PF03944_consen 114 NQSITITISIQNISSNGNVYIDKIEFIPV 142 (143)
T ss_dssp SEEEEEEEEEESSTTTS-EEEEEEEEEEC
T ss_pred CCceEEEEEEEecCCCCeEEEEeEEEEeC
Confidence 33 5555554433 5578999999984
No 9
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=23.00 E-value=87 Score=18.66 Aligned_cols=15 Identities=27% Similarity=0.374 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHhhh
Q 036769 13 SSPLIFLLHLLSVGL 27 (306)
Q Consensus 13 ~~~~~~~l~~~~~~~ 27 (306)
.+.||.+|+.++++.
T Consensus 5 ~FalivVLFILLiIv 19 (24)
T PF09680_consen 5 GFALIVVLFILLIIV 19 (24)
T ss_pred cchhHHHHHHHHHHh
Confidence 567777776666544
No 10
>PHA00527 hypothetical protein
Probab=17.55 E-value=40 Score=27.43 Aligned_cols=17 Identities=41% Similarity=0.550 Sum_probs=0.0
Q ss_pred CccccccccCCchhHHH
Q 036769 1 MAKIQTKKVPKSSSPLI 17 (306)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (306)
|+|..|-++|+|-.||+
T Consensus 1 M~K~~~~~~Pr~~VPLF 17 (129)
T PHA00527 1 MAKTKWPKLPRFFVPLF 17 (129)
T ss_pred CCccccCCCchhheeee
Done!