BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036770
(1061 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GJX|A Chain A, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3GJX|D Chain D, Crystal Structure Of The Nuclear Export Complex Crm1-
Snurportin1-Rangtp
pdb|3NBY|A Chain A, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear Export
Complex
pdb|3NBY|D Chain D, Crystal Structure Of The Pki Nes-Crm1-Rangtp Nuclear Export
Complex
pdb|3NBZ|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NBZ|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal I)
pdb|3NC0|A Chain A, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC0|D Chain D, Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear
Export Complex (Crystal Ii)
pdb|3NC1|A Chain A, Crystal Structure Of The Crm1-Rangtp Complex
Length = 1073
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/1083 (48%), Positives = 719/1083 (66%), Gaps = 47/1083 (4%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
AA +L D SQ +D+ LLD V Y G ++ A ++L L+ +PD W +V IL+ S
Sbjct: 14 AARQLLDFSQKLDINLLDNVVNCLYH-GEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFS 72
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
+N+NTK++ LQ+LE VIK RW LP Q +G+K Y+ +I++ SS+ +E++Y+ KL
Sbjct: 73 QNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKL 132
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
N+ILVQILK EWP W +FI D+V A++TSE++C+N M ILKLLSEEVFDFS G++TQ K
Sbjct: 133 NMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVK 192
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
K LK S+ +EF I +LC +V+ SQ L+ ATL TL FL+WIPLGYIFE+ L+ TL
Sbjct: 193 AKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTL 252
Query: 242 L-KFFPMPSYRNLTLQCLTEVGALNFGDFYNVQYVNMYNVFMVQLQTILPPTTNIPEAYA 300
+ KF +P +RN++L+CLTE+ ++ Y Q+ ++ + M+QL+ +LP TNI AY+
Sbjct: 253 IYKFLNVPMFRNVSLKCLTEIAGVSVSQ-YEEQFETLFTLTMMQLKQMLPLNTNIRLAYS 311
Query: 301 HGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEVFKVC 360
+G +EQ FIQNL+LF +F K H ++LE AL+ L Y++ +S V+ETE+FK+C
Sbjct: 312 NGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEVEETEIFKIC 371
Query: 361 LDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQ---LLQRRQLYAVPL 417
L+YWN EL+ E+P T+ PLL G+Q + RRQLY L
Sbjct: 372 LEYWNHLAAELYR-----ESPFSTS-----ASPLLS------GSQHFDIPPRRQLYLTVL 415
Query: 418 SKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 477
SK+R+LM+ RMAKPEEVL+VE++ G +VRE MKD D + YK MRETL+YL+HLD+ DTE
Sbjct: 416 SKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTE 475
Query: 478 XXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKG 537
G +W+W NLNTLCWAIGSISG+M EE E RFLV VI+DLL LCE +G
Sbjct: 476 IIMTKKLQNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRG 535
Query: 538 KDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQ 597
KDNKA+IASNIMY+VGQYPRFLRAHWKFLKTVVNKLFEFMHETH GVQDMACDTF+KI Q
Sbjct: 536 KDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQ 595
Query: 598 KCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREEY 657
KC+R FV VQVGE PF+ E+L+ + T + DL+P Q+HTFYE+VG+MI A++D +E
Sbjct: 596 KCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHL 655
Query: 658 LQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISVI 717
+++ MLLPNQ W II QA ++VD LKD + ++ + +IL+TN A+G F+ Q+ I
Sbjct: 656 IEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRI 715
Query: 718 FLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIG 777
+LDMLNVYK SE +K ++ +R+VKRETLKLI ++ ++ D +
Sbjct: 716 YLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVA 775
Query: 778 ---------------KQNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEM 822
++NVP ARE EVLS A I+NK G + ++P+IF+A+F+CTL M
Sbjct: 776 ENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNM 835
Query: 823 ITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETG 882
I K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN+A+TG
Sbjct: 836 INKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTG 895
Query: 883 LNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLV 941
L +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L ++F LV
Sbjct: 896 LQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 955
Query: 942 ESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESRNDL 1001
E G ++ PL + NN MF+++Y LL ++FP++ A+V FV GL D+
Sbjct: 956 EEGKISTPLNPGNPV-----NNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDI 1010
Query: 1002 STFKNHIRDFLVQSKEFSAQDNKDLY----XXXXXXXXXXXXXXMLSIPGLIAPNEIQDE 1057
FK H+RDFLVQ KEF+ +D DL+ +S+PG++ P+EI +E
Sbjct: 1011 PAFKEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEE 1070
Query: 1058 MVD 1060
M D
Sbjct: 1071 MCD 1073
>pdb|3GB8|A Chain A, Crystal Structure Of Crm1SNURPORTIN-1 Complex
Length = 1071
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/1083 (48%), Positives = 715/1083 (66%), Gaps = 47/1083 (4%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
AA +L D SQ +D+ LLD V Y G ++ A ++L L+ +PD W +V IL+ S
Sbjct: 12 AARQLLDFSQKLDINLLDNVVNCLYH-GEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFS 70
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
+N+NTK++ LQ+LE VIK RW LP Q +G+K Y+ +I++ SS+ +E++Y+ KL
Sbjct: 71 QNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKL 130
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
N+ILVQILK EWP W +FI D+V A++TSE++C+N M ILKLLSEEVFDFS G++TQ K
Sbjct: 131 NMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVK 190
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
K LK S+ +EF I +LC +V+ SQ L+ ATL TL FL+WIPLGYIFE+ L+ TL
Sbjct: 191 SKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTL 250
Query: 242 L-KFFPMPSYRNLTLQCLTEVGALNFGDFYNVQYVNMYNVFMVQLQTILPPTTNIPEAYA 300
+ KF +P +RN++L+CLTE+ ++ Y Q+V ++ + M+QL+ +LP TNI AY+
Sbjct: 251 IYKFLNVPMFRNVSLKCLTEIAGVSVSQ-YEEQFVTLFTLTMMQLKQMLPLNTNIRLAYS 309
Query: 301 HGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEVFKVC 360
+G +EQ FIQNL+LF +F K H +++E L+ L Y++ +S V+ETE+FK+C
Sbjct: 310 NGKDDEQNFIQNLSLFLCTFLKEHDQLIEKRLNLRETLMEALHYMLLVSEVEETEIFKIC 369
Query: 361 LDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQ---RRQLYAVPL 417
L+YWN EL+ E+P T+ PLL G+Q RRQLY L
Sbjct: 370 LEYWNHLAAELYR-----ESPFSTS-----ASPLLS------GSQHFDVPPRRQLYLPML 413
Query: 418 SKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE 477
K+R+LM+ RMAKPEEVL+VE++ G +VRE MKD D + YK MRETL+YL+HLD+ DTE
Sbjct: 414 FKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTE 473
Query: 478 XXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKG 537
G +W+W NLNTLCWAIGSISG+M EE E RFLV VI+DLL LCE +G
Sbjct: 474 RIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRG 533
Query: 538 KDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQ 597
KDNKA+IASNIMY+VGQYPRFLRAHWKFLKTVVNKLFEFMHETH GVQDMACDTF+KI Q
Sbjct: 534 KDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQ 593
Query: 598 KCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREEY 657
KC+R FV VQVGE PF+ E+L+ + T + DL+P Q+HTFYE+VG+MI A++D +E
Sbjct: 594 KCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHL 653
Query: 658 LQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISVI 717
+++ MLLPNQ W II QA ++VD LKD + ++ + +IL+TN A+G F+ Q+ I
Sbjct: 654 IEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRI 713
Query: 718 FLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIG 777
+LDMLNVYK SE +K ++ +R+VKRETLKLI ++ ++ D +
Sbjct: 714 YLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVA 773
Query: 778 ---------------KQNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEM 822
++NVP ARE EVLS A I+NK G + ++P+IF+A+F+CTL M
Sbjct: 774 ENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNM 833
Query: 823 ITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETG 882
I K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN+A+TG
Sbjct: 834 INKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTG 893
Query: 883 LNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLV 941
L +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L ++F LV
Sbjct: 894 LQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 953
Query: 942 ESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESRNDL 1001
E G ++ L + NN +F++EY LL ++FP++ A+V FV GL D+
Sbjct: 954 EEGKISTSLNPGNPV-----NNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDI 1008
Query: 1002 STFKNHIRDFLVQSKEFSAQDNKDLY----XXXXXXXXXXXXXXMLSIPGLIAPNEIQDE 1057
FK H+RDFLVQ KEF+ +D DL+ +S+PG+ P+EI +E
Sbjct: 1009 PAFKEHLRDFLVQIKEFAGEDTSDLFLEEREIALRQADEEKHKRQMSVPGIFNPHEIPEE 1068
Query: 1058 MVD 1060
M D
Sbjct: 1069 MCD 1071
>pdb|4FGV|A Chain A, Crystal Structure Of Free Crm1 (crystal Form 1)
pdb|4HZK|A Chain A, Crystal Structure Of Free Crm1 (crystal Form 2)
pdb|4HZK|B Chain B, Crystal Structure Of Free Crm1 (crystal Form 2)
Length = 1086
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1079 (43%), Positives = 661/1079 (61%), Gaps = 38/1079 (3%)
Query: 12 PMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNSKNLNTKFFAL 71
P+ V LDATV AFY G E++ AA L + +PD WL V IL + TKF AL
Sbjct: 11 PVSVEELDATVRAFY-EGRGEQQKAAQAALNQFKEDPDAWLMVDEILSRATYEQTKFLAL 69
Query: 72 QVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKLNIILVQILKH 131
QVL+ VI RW LP EQ G++N++ + I+Q SS+E S R R +NKLN++LV +LK
Sbjct: 70 QVLDNVIMTRWKVLPREQCQGIRNFVVQYILQCSSSEESLRTHRTLLNKLNLVLVSVLKQ 129
Query: 132 EWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNS 191
EWP W +FI ++V+A +S ++CEN M IL+LLSEEVFD+S +MT K + LK ++ +
Sbjct: 130 EWPHNWPTFINEIVSACHSSLSVCENNMIILRLLSEEVFDYSADQMTSTKTRNLKSTMCA 189
Query: 192 EFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL-LKFFPMPSY 250
EF +I +LC +L+++ + LI+ATL TL F +WIPLGYIFE+PL++TL +F +P +
Sbjct: 190 EFSMIFQLCQEILNSATQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRTRFLEVPEF 249
Query: 251 RNLTLQCLTEVGALNFGD-----FYNVQYVNMYNVFMVQLQTILPPTTNIPEAYAHGNSE 305
RN+TLQCLTE+G L G Y+ Q + M+ + + I+P ++ Y + NS
Sbjct: 250 RNVTLQCLTEIGGLQTGGPGQPHTYDEQLIKMFTEVLTTISNIIPLQMDLKATYPNSNSR 309
Query: 306 EQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEVFKVCLDYWN 365
+Q FIQNLALF TSFF H+ ++E+ N L G YLI IS +D+ E+FK+CLDYW
Sbjct: 310 DQEFIQNLALFLTSFFTMHLPLIENL-PNRDFLTHGHFYLIRISQIDDREIFKICLDYWL 368
Query: 366 SFVLELFDAHNNLE-NPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLSKLRMLM 424
V EL++ +L N + + + P+ + R+ Y LS LR++M
Sbjct: 369 KLVQELYEEMQSLPLNDMSSMGLGMMSGGGAPN--PALLEHYPLRKHKYKEVLSNLRVVM 426
Query: 425 ICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEXXXXXXX 484
I +M +PEEVLIVE++ G IVRE +KD D + YK +RE L+YL+HLD D E
Sbjct: 427 IEKMVRPEEVLIVENDEGEIVREFVKDTDSVQLYKTIRECLVYLTHLDVVDMEQIMTEKL 486
Query: 485 XXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKGKDNKAVI 544
G +W+W+N N LCWAIGSIS +M EE E RFLV VI+DLL L EM +GKDNKAV+
Sbjct: 487 ARQVDGSEWSWHNCNVLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVV 546
Query: 545 ASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFV 604
ASNIMY+VGQYPRFL+AHWKFLKTVVNKLFEFMHE+H GVQDMACDTF+KI ++C+R FV
Sbjct: 547 ASNIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKQCRRHFV 606
Query: 605 IVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREEYLQRLMLL 664
+Q ENEPF+ E++ + DL P Q+HTFYE+ G+M+ A+ + ++E L LM +
Sbjct: 607 ALQPSENEPFIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQGNRNQQERLLAELMAI 666
Query: 665 PNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISVIFLDMLNV 724
PN W EII A + L + D I+ + NI++TN S S++G +F QI ++ DML +
Sbjct: 667 PNAAWDEIIKAATMNPGILHEPDTIKIIGNIMKTNVSACSSIGPYFFPQIGRLYNDMLQM 726
Query: 725 YKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQ----- 779
Y S+L A+K V+ LR++K+E LKL+ETF++KAED + Q
Sbjct: 727 YAATSQLISEAVARDGEIATKMPKVRGLRTIKKEILKLVETFVEKAEDLQAVRSQMIPGL 786
Query: 780 ----------NVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMITKNFED 829
NVP AR++EVL II + +G M D VP I E +F+CTL+MI K+F +
Sbjct: 787 LDSVLVDYNRNVPGARDAEVLKAMTVIITRLQGLMEDQVPAIMENVFECTLDMINKDFAE 846
Query: 830 YPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEM 889
YPEHR++FF+LLRAI +CFPAL++L ++Q K V+DS +WA +H R++ GLN+ LE+
Sbjct: 847 YPEHRVEFFNLLRAINLYCFPALLKLDNRQFKFVIDSCMWASKHDNRDVETAGLNMCLEL 906
Query: 890 LKNFQAS---EFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGLL 946
+ N + CN F+ +F+ I Q++F VLTDT HK GFK ++L LF V
Sbjct: 907 INNIAEKTDVQTCNAFFNQFFIRILQDVFFVLTDTDHKAGFKTQSMLLMRLFYFVHPADG 966
Query: 947 TEPLWDAATI----PYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESRNDLS 1002
+ P P N F+ + LL +F N+T ++T FV E
Sbjct: 967 SAPKIQGPIYQPDQAQPGTGNREFLANFVGTLLQNAFANLTPLQITTFVKDCFELNTQYD 1026
Query: 1003 TFKNHIRDFLVQSKEFSAQDNKDLYXXXXXXXXXXXXXXML----SIPGLIAPNEIQDE 1057
F+ +RDFL+ +EF A DN +LY L + GL+ P+E++DE
Sbjct: 1027 KFRVVLRDFLISLREF-AGDNAELYQVEKEQQEREARAADLERRSKVGGLLKPSELEDE 1084
>pdb|4GPT|C Chain C, Crystal Structure Of Kpt251 In Complex With Crm1-ran-ranbp1
pdb|4GMX|C Chain C, Crystal Structure Of Kpt185 In Complex With Crm1-Ran-Ranbp1
Length = 1060
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1049 (40%), Positives = 637/1049 (60%), Gaps = 34/1049 (3%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGA---QLLQR---- 409
FK LDYW++ V +LF L PA + + ++ G GA + ++R
Sbjct: 361 FKTTLDYWHNLVADLFYEVQRL--PATEMSPLIQLSVGSQAISTGSGALNPEYMKRFPLK 418
Query: 410 RQLYAVPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLS 469
+ +Y S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+
Sbjct: 419 KHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLT 478
Query: 470 HLDHEDTEXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLL 529
HL+ DTE G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL
Sbjct: 479 HLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLL 538
Query: 530 NLCEMTKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMAC 589
+LC +GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMAC
Sbjct: 539 DLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMAC 598
Query: 590 DTFLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAES 649
DTF+KIVQKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E
Sbjct: 599 DTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEER 658
Query: 650 DVQKREEYLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTF 709
V +R L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G
Sbjct: 659 SVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGAD 718
Query: 710 FLSQISVIFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDK 769
F Q+ I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ K
Sbjct: 719 FYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISK 778
Query: 770 AEDQPQIGK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEA 814
A + + K NVPDAR++EVL+ T++ K + V I ++
Sbjct: 779 ARNLDDVVKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQS 838
Query: 815 IFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHT 874
+F+CTL+MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H
Sbjct: 839 VFECTLDMINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHN 898
Query: 875 ERNIAETGLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHV 931
R++ GL + L+++KN + F N+F++ YF E F VLTD+ HK GF
Sbjct: 899 NRDVEVNGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQA 958
Query: 932 LVLQHLFCLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFV 991
L+L L LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+
Sbjct: 959 LLLMKLISLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFL 1017
Query: 992 DGLLESRNDLSTFKNHIRDFLVQSKEFSA 1020
L + DL FK +RDFLVQ KE
Sbjct: 1018 SALTKQCKDLVVFKGTLRDFLVQIKEVGG 1046
>pdb|4HB4|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1(537dltvk541/glceq)-ran-ranbp1
Length = 1023
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/1042 (40%), Positives = 626/1042 (60%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL LCE +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLGLCEQKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HB2|C Chain C, Crystal Structure Of Crm1-ran-ranbp1
Length = 1023
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/1042 (40%), Positives = 626/1042 (60%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HAT|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1- Ran-ranbp1
pdb|4HAU|C Chain C, Crystal Structure Of Crm1 Inhibitor Ratjadone A In Complex
With Crm1- Ran-ranbp1
pdb|4HAV|C Chain C, Crystal Structure Of Crm1 Inhibitor Anguinomycin A In
Complex With Crm1-ran-ranbp1
Length = 1023
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/1042 (40%), Positives = 626/1042 (60%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGASSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|3M1I|C Chain C, Crystal Structure Of Yeast Crm1 (Xpo1p) In Complex With Yeas
(Yrb1p) And Yeast Rangtp (Gsp1pgtp)
Length = 1049
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/1082 (39%), Positives = 636/1082 (58%), Gaps = 61/1082 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+L +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQY 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSAQDNKDLYXXXXXXXXXXX----XXXMLSIPGLIAPNEI 1054
DL FK +RDFLVQ KE L+ I GL+ P+E+
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLEREKAAKIGGLLKPSEL 1047
Query: 1055 QD 1056
D
Sbjct: 1048 DD 1049
>pdb|4HAX|C Chain C, Crystal Structure Of Crm1 Inhibitor Ratjadone A In Complex
With Crm1(k579a)-ran-ranbp1
Length = 1023
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/1042 (40%), Positives = 625/1042 (59%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ LFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILALFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HAW|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1(k548a)-ran-ranbp1
Length = 1023
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/1042 (40%), Positives = 625/1042 (59%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDN AV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNAAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HAY|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1(k548e,k579q)-ran-ranbp1
Length = 1023
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/1042 (40%), Positives = 626/1042 (60%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDN+AV+AS+IMYVVGQYPRFL+AHW FL+TV+ +LFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNEAVVASDIMYVVGQYPRFLKAHWNFLRTVILQLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HB3|C Chain C, Crystal Structure Of Crm1(t539s)-ran-ranbp1 Soaked In Excess
Crm1 Inhibitor Leptomycin B
Length = 1023
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/1042 (40%), Positives = 625/1042 (59%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+L +
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLSVKKR 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HAZ|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1(r543s,k548e,k579q)-ran-ranbp1
Length = 1023
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/1042 (40%), Positives = 625/1042 (59%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVKKS 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
GKDN+AV+AS+IMYVVGQYPRFL+AHW FL+TV+ +LFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GKDNEAVVASDIMYVVGQYPRFLKAHWNFLRTVILQLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|4HB0|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex
With Crm1(k541q,k542q,r543s,k545q,k548q,k579q)-ran-ranbp1
Length = 1023
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/1042 (40%), Positives = 625/1042 (59%), Gaps = 57/1042 (5%)
Query: 2 AAEKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNS 61
A E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S
Sbjct: 2 AMEGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFS 60
Query: 62 KNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKL 121
N +KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK
Sbjct: 61 TNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKS 120
Query: 122 NIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK 181
++ LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAK 180
Query: 182 IKELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL 241
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 ALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELL 240
Query: 242 -LKFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIP 296
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 STKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLK 300
Query: 297 EAYAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEV 356
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+
Sbjct: 301 ATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEEREL 360
Query: 357 FKVCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVP 416
FK LDYW++ V +LF PL ++ +Y
Sbjct: 361 FKTTLDYWHNLVADLFYE------------------PL--------------KKHIYEEI 388
Query: 417 LSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDT 476
S+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DT
Sbjct: 389 CSQLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDT 448
Query: 477 EXXXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTK 536
E G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+LC
Sbjct: 449 EEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLCVQQS 508
Query: 537 GKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIV 596
G+DN+AV+AS+IMYVVGQYPRFL+AHW FL+TV+ +LFEFMHETH GVQDMACDTF+KIV
Sbjct: 509 GQDNQAVVASDIMYVVGQYPRFLKAHWNFLRTVILQLFEFMHETHEGVQDMACDTFIKIV 568
Query: 597 QKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREE 656
QKCK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R
Sbjct: 569 QKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNR 628
Query: 657 YLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISV 716
L LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+
Sbjct: 629 LLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGH 688
Query: 717 IFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQI 776
I+ +ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + +
Sbjct: 689 IYYNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDV 748
Query: 777 GK---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLE 821
K NVPDAR++EVL+ T++ K + V I +++F+CTL+
Sbjct: 749 VKVLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLD 808
Query: 822 MITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAET 881
MI K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++
Sbjct: 809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 882 GLNLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF 938
GL + L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L
Sbjct: 869 GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 939 CLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESR 998
LV ++ PL+ A +P +N +++ +Y +L +FP++T+ ++ F+ L +
Sbjct: 929 SLVYDNKISVPLYQEAEVPQG-TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQC 987
Query: 999 NDLSTFKNHIRDFLVQSKEFSA 1020
DL FK +RDFLVQ KE
Sbjct: 988 KDLVVFKGTLRDFLVQIKEVGG 1009
>pdb|3VYC|A Chain A, Crystal Structure Of Unliganded Saccharomyces Cerevisiae
Crm1 (Xpo1p)
Length = 1033
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/1080 (39%), Positives = 630/1080 (58%), Gaps = 75/1080 (6%)
Query: 4 EKLRDLSQPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNSKN 63
E + D S +D+ALLD V+ FY GS ++ A +IL Q+NPD W + ILQ S N
Sbjct: 2 EGILDFSNDLDIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFSTN 60
Query: 64 LNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKLNI 123
+KF AL +L+ +I +W LP + R G++N++ +I+ + ++ F+ ++ +NK ++
Sbjct: 61 PQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDL 120
Query: 124 ILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIK 183
LVQILK EWP W FIP+L+ ++ +S +CEN M +LKLLSEEVFDFS +MTQ K
Sbjct: 121 TLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKAL 180
Query: 184 ELKQSLNSEFQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPLGYIFESPLLETL-L 242
LK S++ EF+ I +LC VL + LI ATL +L +L WIP YI+E+ +LE L
Sbjct: 181 HLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLST 240
Query: 243 KFFPMPSYRNLTLQCLTEVGALNF---GDFYNVQYVNMYNVFMVQLQT-ILPPTTNIPEA 298
KF P R +TL+CLTEV L D Q V + + Q+ T ++P T ++
Sbjct: 241 KFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKAT 300
Query: 299 YAHGNSEEQAFIQNLALFFTSFFKFHIRVLESTQENISALLMGLEYLINISYVDETEVFK 358
YA+ N +Q+F+Q+LA+F T++ + +LES + LL +YLI +S ++E E+FK
Sbjct: 301 YANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFK 360
Query: 359 VCLDYWNSFVLELFDAHNNLENPAVTANMMGLPMPLLPSVVDGIGAQLLQRRQLYAVPLS 418
LDYW++ V +LF PL ++ +Y S
Sbjct: 361 TTLDYWHNLVADLFYE------------------PL--------------KKHIYEEICS 388
Query: 419 KLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEX 478
+LR+++I M +PEEVL+VE++ G IVRE +K++D + YK RE L+YL+HL+ DTE
Sbjct: 389 QLRLVIIENMVRPEEVLVVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLNVIDTEE 448
Query: 479 XXXXXXXXXXXGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEMTKGK 538
G +W+W+N+NTL WAIGSISG+M E+ E RF+V VI+DLL+L +GK
Sbjct: 449 IMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGK 508
Query: 539 DNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQK 598
DNKAV+AS+IMYVVGQYPRFL+AHW FL+TV+ KLFEFMHETH GVQDMACDTF+KIVQK
Sbjct: 509 DNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQK 568
Query: 599 CKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDVQKREEYL 658
CK FVI Q E+EPF+ ++ + T ADL+P Q+HTFY++ G +I E V +R L
Sbjct: 569 CKYHFVIQQPRESEPFIQTIIRDIQKTTADLQPQQVHTFYKACGIIISEERSVAERNRLL 628
Query: 659 QRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFLSQISVIF 718
LM LPN W I+ Q+ + L D + ++ + NI++TN +V +++G F Q+ I+
Sbjct: 629 SDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGADFYPQLGHIY 688
Query: 719 LDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGK 778
+ML +Y+ S + A+KT V+ LR++K+E LKL+ET++ KA + + K
Sbjct: 689 YNMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETYISKARNLDDVVK 748
Query: 779 ---------------QNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQCTLEMI 823
NVPDAR++EVL+ T++ K + V I +++F+CTL+MI
Sbjct: 749 VLVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMI 808
Query: 824 TKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGL 883
K+F +YPEHR++F+ LL+ I F A + L KL +D+I WAF+H R++ GL
Sbjct: 809 NKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGL 868
Query: 884 NLLLEMLKNFQA---SEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCL 940
+ L+++KN + F N+F++ YF E F VLTD+ HK GF L+L L L
Sbjct: 869 QIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISL 928
Query: 941 VESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLESRND 1000
V +D T +N +++ +Y +L +FP++T+ ++ F+ L + D
Sbjct: 929 V---------YDNKT------SNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKD 973
Query: 1001 LSTFKNHIRDFLVQSKEFSAQDNKDLYXXXXXXXXXXX----XXXMLSIPGLIAPNEIQD 1056
L FK +RDFLVQ KE L+ I GL+ P+E+ D
Sbjct: 974 LVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLEREKAAKIGGLLKPSELDD 1033
>pdb|1W9C|A Chain A, Proteolytic Fragment Of Crm1 Spanning Six C-Terminal Heat
Repeats
pdb|1W9C|B Chain B, Proteolytic Fragment Of Crm1 Spanning Six C-Terminal Heat
Repeats
Length = 321
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 199/324 (61%), Gaps = 21/324 (6%)
Query: 713 QISVIFLDMLNVYKMYSELXXXXXXXXXPFASKTSYVKLLRSVKRETLKLIETFLDKAED 772
Q+ I+LDMLNVYK SE +K ++ +R+VKRETLKLI ++ ++ D
Sbjct: 3 QLGRIYLDMLNVYKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSND 62
Query: 773 QPQIG---------------KQNVPDARESEVLSLFATIINKYKGAMIDDVPRIFEAIFQ 817
+ ++NVP ARE EVLS A I+NK G + ++P+IF+A+F+
Sbjct: 63 PQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFE 122
Query: 818 CTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERN 877
CTL MI K+FE+YPEHR FF LL+A+ +HCFPA + + Q KLV+DSIIWAF+HT RN
Sbjct: 123 CTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRN 182
Query: 878 IAETGLNLLLEMLKNFQASEFCNQ-FYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQH 936
+A+TGL +L +L+N E Q FY+TYF I Q IF+V+TDT H G +H +L +
Sbjct: 183 VADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAY 242
Query: 937 LFCLVESGLLTEPLWDAATIPYPYPNNAMFVREYTIKLLGTSFPNMTAAEVTQFVDGLLE 996
+F LVE G ++ L + NN +F++EY LL ++FP++ A+V FV GL
Sbjct: 243 MFNLVEEGKISTSLNPGNPV-----NNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFS 297
Query: 997 SRNDLSTFKNHIRDFLVQSKEFSA 1020
D+ FK H+RDFLVQ KEF+
Sbjct: 298 LNQDIPAFKEHLRDFLVQIKEFAG 321
>pdb|2L1L|B Chain B, Nmr Solution Structure Of The Phi0 Pki Nes Peptide In
Complex With Crm1-Rangtp
Length = 127
Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 108/127 (85%)
Query: 508 ISGSMMEEQENRFLVMVIRDLLNLCEMTKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLK 567
ISG+M EE E RFLV VI+DLL LCE +GKDNKA+IASNIMY+VGQYPRFLRAHWKFLK
Sbjct: 1 ISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLK 60
Query: 568 TVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVA 627
TVVNKLFEFMHETH GVQDMACDTF+KI QKC+R FV VQVGE PF+ E+L+ + T +
Sbjct: 61 TVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIIC 120
Query: 628 DLEPHQI 634
DL+P Q+
Sbjct: 121 DLQPQQV 127
>pdb|3A6P|A Chain A, Crystal Structure Of Exportin-5:rangtp:pre-Mirna Complex
pdb|3A6P|F Chain F, Crystal Structure Of Exportin-5:rangtp:pre-Mirna Complex
Length = 1204
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 22/184 (11%)
Query: 67 KFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKLNIILV 126
+ F LQ+LE V+K+RWN + ++ +KN + E+I + N EE + L+ I+V
Sbjct: 64 RHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLN--ILEEENHIKDALSRIVV 121
Query: 127 QILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELK 186
+++K EWP W + +L +K ET E M IL L+E+V F + Q+ ++++
Sbjct: 122 EMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQ--TLPPQRRRDIQ 179
Query: 187 QSLNSEFQLIHELCLYVLSAS------QRTDLIR------------ATLSTLHAFLSWIP 228
Q+L + I L L + +TD + A L+TL ++ W+
Sbjct: 180 QTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVS 239
Query: 229 LGYI 232
+ +I
Sbjct: 240 MSHI 243
>pdb|2X1G|F Chain F, Crystal Structure Of Importin13 - Mago-Y14 Complex
pdb|2X1G|G Chain G, Crystal Structure Of Importin13 - Mago-Y14 Complex
Length = 971
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 11 QPMDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVVHILQNSKNLNTKFFA 70
+P+D+A L+ V +FY + S+ + + L D + +P W ++Q K+ +FF
Sbjct: 2 EPIDIARLEEAVVSFYRSNSQNQ-AITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFG 60
Query: 71 LQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFREERLYVNKLNIILVQILK 130
L + W+ +P E R+ +K I E IV+ + ++ +N+L I L +
Sbjct: 61 AITLHSKLMKHWHEVPPENREELKQKILESIVRFAGG------PKIVLNRLCISLGAYIV 114
Query: 131 H---EWPA 135
H EWP
Sbjct: 115 HMLGEWPG 122
>pdb|2H4M|A Chain A, Karyopherin Beta2TRANSPORTIN-M9nls
pdb|2H4M|B Chain B, Karyopherin Beta2TRANSPORTIN-M9nls
Length = 865
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 539 DNKAVIASNIMYVVGQYPRFLRAHW-------KFLKTVVNKLFEFMHETHPGVQDMACDT 591
D KA++ S + + +Y AHW +LK ++ +L + + +++ VQ+ AC
Sbjct: 424 DKKALVRSITCWTLSRY-----AHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSA 478
Query: 592 FLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDV 651
F + ++ + V P+++ +L L + + + Y+++G + +
Sbjct: 479 FATLEEEACTELV--------PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH 530
Query: 652 QKREEYLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFL 711
+ EY+Q LM QKW + LKD+D + + +L+ +SVA+AL + FL
Sbjct: 531 LNKPEYIQMLMPPLIQKW-----------NMLKDED--KDLFPLLECLSSVATALQSGFL 577
Query: 712 SQISVIFLDMLNVYK 726
++ +N+ +
Sbjct: 578 PYCEPVYQRCVNLVQ 592
>pdb|2QMR|A Chain A, Karyopherin Beta2TRANSPORTIN
pdb|2QMR|B Chain B, Karyopherin Beta2TRANSPORTIN
pdb|2QMR|C Chain C, Karyopherin Beta2TRANSPORTIN
pdb|2QMR|D Chain D, Karyopherin Beta2TRANSPORTIN
pdb|2Z5J|A Chain A, Free Transportin 1
pdb|2Z5K|A Chain A, Complex Of Transportin 1 With Tap Nls
pdb|2Z5M|A Chain A, Complex Of Transportin 1 With Tap Nls, Crystal Form 2
pdb|2Z5N|A Chain A, Complex Of Transportin 1 With Hnrnp D Nls
pdb|2Z5O|A Chain A, Complex Of Transportin 1 With Jktbp Nls
Length = 890
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 539 DNKAVIASNIMYVVGQYPRFLRAHW-------KFLKTVVNKLFEFMHETHPGVQDMACDT 591
D KA++ S + + +Y AHW +LK ++ +L + + +++ VQ+ AC
Sbjct: 449 DKKALVRSITCWTLSRY-----AHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSA 503
Query: 592 FLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDV 651
F + ++ + V P+++ +L L + + + Y+++G + +
Sbjct: 504 FATLEEEACTELV--------PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH 555
Query: 652 QKREEYLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFL 711
+ EY+Q LM QKW + LKD+D + + +L+ +SVA+AL + FL
Sbjct: 556 LNKPEYIQMLMPPLIQKW-----------NMLKDED--KDLFPLLECLSSVATALQSGFL 602
Query: 712 SQISVIFLDMLNVYK 726
++ +N+ +
Sbjct: 603 PYCEPVYQRCVNLVQ 617
>pdb|2OT8|A Chain A, Karyopherin Beta2TRANSPORTIN-Hnrnpm Nls Complex
pdb|2OT8|B Chain B, Karyopherin Beta2TRANSPORTIN-Hnrnpm Nls Complex
pdb|4FDD|A Chain A, Crystal Structure Of Kap Beta2-Py-Nls
pdb|4H1K|A Chain A, Crystal Structure Of Human Kap-Beta2 Bound To The Nls Of
Saccharomyces Cerevisiae Nab2
Length = 852
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 33/195 (16%)
Query: 539 DNKAVIASNIMYVVGQYPRFLRAHW-------KFLKTVVNKLFEFMHETHPGVQDMACDT 591
D KA++ S + + +Y AHW +LK ++ +L + + +++ VQ+ AC
Sbjct: 411 DKKALVRSITCWTLSRY-----AHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSA 465
Query: 592 FLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDV 651
F + ++ + V P+++ +L L + + + Y+++G + +
Sbjct: 466 FATLEEEACTELV--------PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH 517
Query: 652 QKREEYLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFL 711
+ EY+Q LM QKW + LKD+D + + +L+ +SVA+AL + FL
Sbjct: 518 LNKPEYIQMLMPPLIQKW-----------NMLKDED--KDLFPLLECLSSVATALQSGFL 564
Query: 712 SQISVIFLDMLNVYK 726
++ +N+ +
Sbjct: 565 PYCEPVYQRCVNLVQ 579
>pdb|1QBK|B Chain B, Structure Of The Karyopherin Beta2-ran Gppnhp Nuclear
Transport Complex
Length = 890
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 33/195 (16%)
Query: 539 DNKAVIASNIMYVVGQYPRFLRAHW-------KFLKTVVNKLFEFMHETHPGVQDMACDT 591
D KA++ S + + +Y AHW +LK + +L + + +++ VQ+ AC
Sbjct: 449 DKKALVRSITCWTLSRY-----AHWVVSQPPDTYLKPLXTELLKRILDSNKRVQEAACSA 503
Query: 592 FLKIVQKCKRKFVIVQVGENEPFVSELLSGLATTVADLEPHQIHTFYESVGHMIQAESDV 651
F + ++ + V P+++ +L L + + + Y+++G + +
Sbjct: 504 FATLEEEACTELV--------PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH 555
Query: 652 QKREEYLQRLMLLPNQKWSEIIAQARQSVDFLKDQDVIRTVLNILQTNTSVASALGTFFL 711
+ EY+Q L QKW + LKD+D + + +L+ +SVA+AL + FL
Sbjct: 556 LNKPEYIQXLXPPLIQKW-----------NXLKDED--KDLFPLLECLSSVATALQSGFL 602
Query: 712 SQISVIFLDMLNVYK 726
++ +N+ +
Sbjct: 603 PYCEPVYQRCVNLVQ 617
>pdb|3IBV|A Chain A, Karyopherin Cytosolic State
pdb|3IBV|B Chain B, Karyopherin Cytosolic State
pdb|3ICQ|T Chain T, Karyopherin Nuclear State
pdb|3ICQ|U Chain U, Karyopherin Nuclear State
Length = 980
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 26/212 (12%)
Query: 65 NTKFFALQVLEGVIKYRWNA----LPVEQ-RDGMKNYISEVIVQLSSNEASFREERLYV- 118
+T+ LQ L ++ WN L ++ RD + +YI E+ SF +E Y+
Sbjct: 58 STRLICLQTLSEKVR-EWNNESNLLELQMIRDSVWSYIKEL---------SFLDEPAYIS 107
Query: 119 NKLNIILVQILKHEWPARWRSFIPDL--VAAAKTSETICENCMAILKLLSEEVFD--FSR 174
N + +L + +P+ W F L V AA + + +L + +E+ D +
Sbjct: 108 NAVQHLLTLLFLQLYPSNWNDFFASLQGVIAASSQSEFSNFYLKVLLSIGDEIADSLVLK 167
Query: 175 GEMTQQKIKELKQSLNSE-----FQLIHELCLYVLSASQRTDLIRATLSTLHAFLSWIPL 229
++ QK +K ++ + ++E+ L S ++ + L ++SWI +
Sbjct: 168 TDVQIQKDNLVKDAIRANDMSDIVSFVYEMML-AYSNAKNYGTVGLCLQVYAQWVSWINI 226
Query: 230 GYIFESPLLETLLKFFPMPSYRNLTLQCLTEV 261
I P + L F + R + +TE+
Sbjct: 227 NLIVNEPCMNLLYSFLQIEELRCAACETMTEI 258
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 790 LSLFATIINKYK--GAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATH 847
LS F+ + ++ + G M + + E +FQ E +TKN+ + PE+ + +S + AI+T
Sbjct: 681 LSYFSLMFDRSEVYGPMKKYLRKQVEPLFQH-FETLTKNWTERPENLMDQYSEINAISTA 739
Query: 848 CFPAL 852
C L
Sbjct: 740 CSNGL 744
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 790 LSLFATIINKYK--GAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRLKFFSLLRAIATH 847
LS F+ + ++ + G M + + E +FQ E +TKN+ + PE+ + +S + AI+T
Sbjct: 638 LSYFSLMFDRSEVYGPMKKYLRKQVEPLFQH-FETLTKNWTERPENLMDQYSEINAISTA 696
Query: 848 CFPAL 852
C L
Sbjct: 697 CSNGL 701
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 778 KQNVPDARESEVLSLFATIINKYK--GAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRL 835
K+ +P LS F+ + ++ + G M + + E +FQ E +TKN+ + PE+ +
Sbjct: 625 KEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQH-FETLTKNWTERPENLM 683
Query: 836 KFFSLLRAIATHCFPAL 852
+S + AI+T C L
Sbjct: 684 DQYSEINAISTACSNGL 700
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 778 KQNVPDARESEVLSLFATIINKYK--GAMIDDVPRIFEAIFQCTLEMITKNFEDYPEHRL 835
K+ +P LS F+ + ++ + G M + + E +FQ E +TKN+ + PE+ +
Sbjct: 625 KEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQH-FETLTKNWTERPENLM 683
Query: 836 KFFSLLRAIATHCFPAL 852
+S + AI+T C L
Sbjct: 684 DQYSEINAISTACSNGL 700
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,656,436
Number of Sequences: 62578
Number of extensions: 1068115
Number of successful extensions: 2657
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2519
Number of HSP's gapped (non-prelim): 45
length of query: 1061
length of database: 14,973,337
effective HSP length: 109
effective length of query: 952
effective length of database: 8,152,335
effective search space: 7761022920
effective search space used: 7761022920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)