Query 036778
Match_columns 145
No_of_seqs 118 out of 1552
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 05:24:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036778.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036778hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 99.8 9.8E-21 2.1E-25 147.5 11.1 135 2-143 279-472 (485)
2 KOG0254 Predicted transporter 99.8 2.3E-18 4.9E-23 136.2 10.1 135 1-143 303-501 (513)
3 PF00083 Sugar_tr: Sugar (and 99.6 3.9E-18 8.6E-23 132.1 -5.3 131 2-140 262-451 (451)
4 PRK10077 xylE D-xylose transpo 99.6 1.8E-14 4E-19 112.3 13.8 135 3-143 281-475 (479)
5 TIGR00887 2A0109 phosphate:H+ 99.6 1.4E-14 3.1E-19 114.2 9.9 127 11-138 306-501 (502)
6 TIGR00879 SP MFS transporter, 99.2 2.2E-10 4.9E-15 88.2 10.9 125 5-135 296-480 (481)
7 KOG0253 Synaptic vesicle trans 99.2 2.4E-11 5.1E-16 92.0 4.9 72 45-117 392-490 (528)
8 TIGR01299 synapt_SV2 synaptic 99.2 1.3E-10 2.8E-15 95.7 8.0 83 40-122 601-709 (742)
9 KOG0252 Inorganic phosphate tr 99.1 1.7E-11 3.7E-16 94.7 2.6 132 10-141 321-513 (538)
10 TIGR00903 2A0129 major facilit 99.1 6.7E-10 1.4E-14 84.9 10.9 113 7-125 5-145 (368)
11 PRK10642 proline/glycine betai 99.1 2.3E-10 4.9E-15 90.2 8.1 110 7-122 264-403 (490)
12 TIGR00893 2A0114 d-galactonate 99.1 6.5E-10 1.4E-14 83.5 7.8 112 5-122 6-143 (399)
13 PRK10473 multidrug efflux syst 99.1 7.9E-10 1.7E-14 84.4 8.0 113 3-121 13-151 (392)
14 TIGR00898 2A0119 cation transp 99.0 5.9E-10 1.3E-14 87.8 6.8 90 45-135 366-504 (505)
15 TIGR00711 efflux_EmrB drug res 99.0 8E-10 1.7E-14 86.3 7.4 110 7-122 16-151 (485)
16 TIGR02332 HpaX 4-hydroxyphenyl 99.0 4.3E-09 9.3E-14 81.4 10.9 107 9-121 24-156 (412)
17 PRK12307 putative sialic acid 99.0 1.9E-09 4.2E-14 83.0 8.3 107 10-122 35-167 (426)
18 TIGR01299 synapt_SV2 synaptic 99.0 6.8E-09 1.5E-13 85.7 11.0 100 11-116 185-310 (742)
19 KOG0569 Permease of the major 99.0 5.3E-09 1.1E-13 82.3 9.7 98 16-113 42-168 (485)
20 PRK03545 putative arabinose tr 99.0 5.5E-09 1.2E-13 79.9 9.4 102 15-122 31-158 (390)
21 TIGR00895 2A0115 benzoate tran 99.0 4.4E-09 9.5E-14 79.5 8.7 107 10-122 34-166 (398)
22 TIGR00710 efflux_Bcr_CflA drug 98.9 5.8E-09 1.2E-13 78.9 8.9 107 10-122 22-154 (385)
23 TIGR00891 2A0112 putative sial 98.9 9.9E-09 2.1E-13 77.9 10.0 106 10-121 29-160 (405)
24 TIGR00887 2A0109 phosphate:H+ 98.9 7.4E-09 1.6E-13 81.9 9.4 81 38-118 60-172 (502)
25 TIGR00900 2A0121 H+ Antiporter 98.9 8.2E-09 1.8E-13 77.2 8.6 107 10-122 16-153 (365)
26 PRK10213 nepI ribonucleoside t 98.9 1.8E-08 3.8E-13 77.5 9.9 102 15-122 42-169 (394)
27 PLN00028 nitrate transmembrane 98.9 1.6E-08 3.5E-13 79.6 9.7 107 8-120 51-182 (476)
28 PRK09874 drug efflux system pr 98.9 4.2E-08 9.1E-13 75.0 10.9 114 8-122 29-167 (408)
29 PRK14995 methyl viologen resis 98.8 1.2E-08 2.6E-13 80.6 7.7 108 9-122 22-156 (495)
30 PRK11663 regulatory protein Uh 98.8 1.9E-08 4.2E-13 78.1 8.7 106 11-122 41-172 (434)
31 PRK15403 multidrug efflux syst 98.8 2.3E-08 4.9E-13 77.4 8.8 100 17-122 40-165 (413)
32 cd06174 MFS The Major Facilita 98.8 3.4E-08 7.4E-13 73.2 9.4 109 8-122 14-148 (352)
33 PRK15462 dipeptide/tripeptide 98.8 3.2E-08 6.9E-13 78.4 9.5 109 8-122 24-163 (493)
34 PRK11102 bicyclomycin/multidru 98.8 1.5E-08 3.2E-13 76.7 7.5 107 10-122 8-140 (377)
35 TIGR00898 2A0119 cation transp 98.8 8.8E-09 1.9E-13 81.2 6.3 89 37-125 130-244 (505)
36 PRK11551 putative 3-hydroxyphe 98.8 2.5E-08 5.3E-13 76.4 8.5 108 9-122 236-369 (406)
37 PRK10504 putative transporter; 98.8 3.9E-08 8.4E-13 76.9 9.4 110 7-122 24-159 (471)
38 PRK10091 MFS transport protein 98.8 4E-08 8.6E-13 75.1 9.0 105 11-121 21-151 (382)
39 PRK10489 enterobactin exporter 98.8 1.7E-08 3.8E-13 77.8 7.0 122 12-139 242-413 (417)
40 PRK11195 lysophospholipid tran 98.8 3.5E-08 7.6E-13 75.9 8.5 104 13-122 23-149 (393)
41 PRK10077 xylE D-xylose transpo 98.8 9.9E-08 2.1E-12 74.6 11.0 79 38-116 59-175 (479)
42 TIGR00886 2A0108 nitrite extru 98.8 6.5E-08 1.4E-12 72.8 9.7 109 6-120 14-149 (366)
43 PRK10406 alpha-ketoglutarate t 98.8 5.4E-08 1.2E-12 75.6 9.4 107 8-120 258-396 (432)
44 PRK15075 citrate-proton sympor 98.8 4.5E-08 9.8E-13 76.0 8.8 112 5-122 250-393 (434)
45 PRK12307 putative sialic acid 98.8 7.4E-08 1.6E-12 74.2 9.6 105 12-122 250-382 (426)
46 PRK09952 shikimate transporter 98.8 8.1E-08 1.8E-12 74.8 9.9 109 8-122 265-405 (438)
47 PRK15402 multidrug efflux syst 98.7 6.7E-08 1.5E-12 74.2 9.0 102 15-122 35-162 (406)
48 PRK11551 putative 3-hydroxyphe 98.7 7.1E-08 1.5E-12 73.9 9.1 104 11-120 33-162 (406)
49 PF07690 MFS_1: Major Facilita 98.7 6E-08 1.3E-12 72.2 8.3 109 8-122 11-146 (352)
50 PRK10642 proline/glycine betai 98.7 1.4E-07 3.1E-12 74.4 10.8 108 10-117 33-174 (490)
51 PRK10054 putative transporter; 98.7 9.2E-08 2E-12 73.6 9.4 111 6-122 20-157 (395)
52 TIGR02332 HpaX 4-hydroxyphenyl 98.7 5.8E-08 1.3E-12 75.1 8.3 115 4-122 253-394 (412)
53 PRK15075 citrate-proton sympor 98.7 1.9E-07 4.2E-12 72.5 11.1 111 5-116 27-172 (434)
54 PRK03893 putative sialic acid 98.7 1.3E-07 2.8E-12 74.3 9.6 107 10-122 37-169 (496)
55 KOG0255 Synaptic vesicle trans 98.7 6.6E-08 1.4E-12 76.8 8.0 86 39-125 123-235 (521)
56 PRK03699 putative transporter; 98.7 1.9E-07 4E-12 71.7 10.1 105 11-121 25-155 (394)
57 TIGR00881 2A0104 phosphoglycer 98.7 2.3E-08 4.9E-13 75.0 5.0 101 8-114 10-136 (379)
58 TIGR00895 2A0115 benzoate tran 98.7 1.3E-07 2.9E-12 71.4 9.2 107 8-120 265-397 (398)
59 PRK09556 uhpT sugar phosphate 98.7 1.2E-07 2.5E-12 74.4 9.1 107 10-122 275-411 (467)
60 TIGR00879 SP MFS transporter, 98.7 1.4E-07 3E-12 72.8 9.0 81 37-117 74-183 (481)
61 TIGR00890 2A0111 Oxalate/Forma 98.7 1.9E-07 4.2E-12 69.9 9.4 102 15-122 227-356 (377)
62 TIGR00891 2A0112 putative sial 98.7 2.3E-07 4.9E-12 70.5 9.8 102 15-122 260-389 (405)
63 PRK12382 putative transporter; 98.7 1.3E-07 2.9E-12 72.1 8.6 97 20-122 43-173 (392)
64 TIGR00893 2A0114 d-galactonate 98.7 1.3E-07 2.9E-12 71.0 8.3 109 8-122 230-372 (399)
65 PRK10406 alpha-ketoglutarate t 98.6 4.5E-07 9.7E-12 70.5 11.0 106 10-116 39-179 (432)
66 PRK09705 cynX putative cyanate 98.6 1.6E-07 3.4E-12 72.2 8.2 104 12-122 28-157 (393)
67 PRK03633 putative MFS family t 98.6 2.1E-07 4.6E-12 71.0 8.0 107 10-122 23-155 (381)
68 cd06174 MFS The Major Facilita 98.6 5.4E-07 1.2E-11 66.7 10.0 112 5-122 187-326 (352)
69 TIGR00894 2A0114euk Na(+)-depe 98.6 3.2E-07 6.9E-12 71.8 9.1 88 35-122 77-192 (465)
70 PRK10207 dipeptide/tripeptide 98.6 3.1E-07 6.7E-12 72.8 9.0 109 8-122 29-168 (489)
71 TIGR00880 2_A_01_02 Multidrug 98.6 1.2E-07 2.7E-12 61.2 5.5 81 42-122 6-112 (141)
72 PRK11273 glpT sn-glycerol-3-ph 98.6 4.7E-07 1E-11 70.8 9.6 107 10-122 270-409 (452)
73 PRK11646 multidrug resistance 98.6 4.7E-07 1E-11 69.8 9.3 110 7-122 24-160 (400)
74 TIGR00897 2A0118 polyol permea 98.6 5.2E-07 1.1E-11 69.4 9.5 103 10-118 30-163 (402)
75 PRK11043 putative transporter; 98.6 8.6E-07 1.9E-11 67.9 10.6 100 17-122 30-155 (401)
76 PRK11652 emrD multidrug resist 98.6 4.8E-07 1E-11 69.2 8.8 102 15-122 30-157 (394)
77 PRK09705 cynX putative cyanate 98.6 9.8E-07 2.1E-11 67.8 10.5 109 8-122 220-354 (393)
78 PRK05122 major facilitator sup 98.6 3.1E-07 6.8E-12 70.2 7.7 105 12-122 34-173 (399)
79 TIGR00924 yjdL_sub1_fam amino 98.6 5E-07 1.1E-11 71.3 9.0 110 7-122 24-166 (475)
80 PRK09556 uhpT sugar phosphate 98.5 6.6E-08 1.4E-12 75.8 3.8 97 16-118 52-179 (467)
81 TIGR00897 2A0118 polyol permea 98.5 9E-07 2E-11 68.1 10.0 111 5-122 234-375 (402)
82 TIGR00806 rfc RFC reduced fola 98.5 7.6E-07 1.7E-11 70.1 9.2 104 13-122 46-175 (511)
83 PRK03893 putative sialic acid 98.5 4.2E-07 9.2E-12 71.4 8.0 104 13-122 295-427 (496)
84 COG2814 AraJ Arabinose efflux 98.5 8E-07 1.7E-11 68.4 9.0 108 12-125 32-168 (394)
85 TIGR00883 2A0106 metabolite-pr 98.5 4.2E-07 9.1E-12 68.5 7.5 109 8-122 234-374 (394)
86 TIGR00903 2A0129 major facilit 98.5 5.2E-07 1.1E-11 69.0 7.7 109 3-121 202-340 (368)
87 PRK11663 regulatory protein Uh 98.5 3.5E-07 7.6E-12 71.1 6.5 107 10-122 260-398 (434)
88 PRK08633 2-acyl-glycerophospho 98.5 6.2E-07 1.3E-11 77.0 8.3 86 37-122 50-164 (1146)
89 TIGR00899 2A0120 sugar efflux 98.5 8E-07 1.7E-11 67.0 7.9 106 11-122 15-150 (375)
90 TIGR00885 fucP L-fucose:H+ sym 98.4 2.2E-06 4.7E-11 66.5 9.7 102 13-120 23-153 (410)
91 TIGR00896 CynX cyanate transpo 98.4 1.2E-06 2.5E-11 66.1 7.9 105 10-121 17-146 (355)
92 TIGR00890 2A0111 Oxalate/Forma 98.4 7.4E-07 1.6E-11 66.8 6.7 102 11-119 21-148 (377)
93 PRK09952 shikimate transporter 98.4 4.1E-06 8.9E-11 65.3 10.6 76 43-118 73-182 (438)
94 PRK10133 L-fucose transporter; 98.4 4.1E-06 8.9E-11 65.5 9.9 104 9-118 42-174 (438)
95 TIGR00881 2A0104 phosphoglycer 98.4 2.4E-06 5.1E-11 64.1 8.1 107 10-122 233-371 (379)
96 PRK11273 glpT sn-glycerol-3-ph 98.4 2.5E-06 5.3E-11 66.7 8.4 92 13-111 49-170 (452)
97 PRK15034 nitrate/nitrite trans 98.4 4E-06 8.7E-11 66.1 9.4 94 22-121 64-187 (462)
98 TIGR00892 2A0113 monocarboxyla 98.3 1.6E-06 3.4E-11 68.0 7.0 104 12-122 38-168 (455)
99 PRK05122 major facilitator sup 98.3 3.9E-06 8.5E-11 64.2 9.0 104 11-122 234-363 (399)
100 PRK10489 enterobactin exporter 98.3 1.7E-06 3.6E-11 66.8 6.9 107 10-122 34-171 (417)
101 TIGR00883 2A0106 metabolite-pr 98.3 8.5E-06 1.8E-10 61.4 10.6 113 6-118 6-153 (394)
102 KOG1330 Sugar transporter/spin 98.3 1.2E-07 2.6E-12 73.7 0.4 74 40-113 74-173 (493)
103 KOG0254 Predicted transporter 98.3 2.2E-06 4.9E-11 68.2 7.6 84 37-121 92-201 (513)
104 TIGR00712 glpT glycerol-3-phos 98.3 1.8E-06 3.9E-11 67.2 7.0 97 16-119 50-176 (438)
105 KOG2615 Permease of the major 98.3 8.9E-07 1.9E-11 67.6 4.8 86 37-122 71-181 (451)
106 TIGR00711 efflux_EmrB drug res 98.3 7E-06 1.5E-10 64.2 9.7 108 9-122 271-409 (485)
107 TIGR00900 2A0121 H+ Antiporter 98.3 7.8E-06 1.7E-10 61.0 9.6 103 14-122 232-362 (365)
108 PRK15011 sugar efflux transpor 98.3 8.5E-06 1.8E-10 62.5 9.6 102 14-122 237-365 (393)
109 PRK03699 putative transporter; 98.3 9.1E-06 2E-10 62.3 9.3 108 8-122 220-354 (394)
110 PRK12382 putative transporter; 98.2 7.3E-06 1.6E-10 62.6 8.4 107 8-122 231-363 (392)
111 PRK03633 putative MFS family t 98.2 1.5E-05 3.2E-10 60.8 10.1 106 11-122 218-346 (381)
112 TIGR00901 2A0125 AmpG-related 98.2 8.2E-06 1.8E-10 61.5 8.3 103 11-121 6-143 (356)
113 PRK09584 tppB putative tripept 98.2 1.5E-05 3.2E-10 63.5 10.0 109 8-122 36-175 (500)
114 TIGR00712 glpT glycerol-3-phos 98.2 3.7E-06 8.1E-11 65.4 6.3 109 8-122 266-407 (438)
115 COG2271 UhpC Sugar phosphate p 98.2 8.6E-07 1.9E-11 68.4 2.7 98 17-121 53-179 (448)
116 PRK06814 acylglycerophosphoeth 98.2 1.1E-05 2.4E-10 69.7 9.4 86 37-122 55-169 (1140)
117 PF00083 Sugar_tr: Sugar (and 98.2 4.8E-08 1E-12 75.8 -5.0 81 36-116 48-157 (451)
118 TIGR00889 2A0110 nucleoside tr 98.2 2.3E-05 5E-10 60.9 9.7 84 39-122 256-370 (418)
119 COG2223 NarK Nitrate/nitrite t 98.1 8.5E-06 1.8E-10 62.8 6.7 96 20-122 41-164 (417)
120 TIGR00899 2A0120 sugar efflux 98.1 2.7E-05 5.8E-10 58.7 9.2 102 14-122 220-348 (375)
121 PF12832 MFS_1_like: MFS_1 lik 98.1 1.1E-05 2.4E-10 48.3 5.6 60 3-68 10-69 (77)
122 PF07690 MFS_1: Major Facilita 98.1 1.8E-05 4E-10 58.8 7.9 102 8-114 221-352 (352)
123 KOG0252 Inorganic phosphate tr 98.1 1.6E-06 3.5E-11 67.7 2.2 73 37-109 87-192 (538)
124 PRK11902 ampG muropeptide tran 98.1 2.5E-05 5.3E-10 60.1 8.7 111 4-122 10-155 (402)
125 PRK03545 putative arabinose tr 98.1 6.4E-05 1.4E-09 57.5 10.4 102 14-122 226-354 (390)
126 TIGR00894 2A0114euk Na(+)-depe 98.1 1.5E-05 3.3E-10 62.3 7.0 112 3-121 271-420 (465)
127 PRK11010 ampG muropeptide tran 98.0 3.6E-05 7.9E-10 61.1 9.1 107 8-122 27-168 (491)
128 TIGR00882 2A0105 oligosacchari 98.0 3E-05 6.4E-10 59.4 8.4 55 7-67 16-71 (396)
129 PF06609 TRI12: Fungal trichot 98.0 2.6E-05 5.7E-10 63.2 8.1 102 17-125 68-197 (599)
130 TIGR00896 CynX cyanate transpo 98.0 7.1E-05 1.5E-09 56.4 9.8 108 9-122 213-347 (355)
131 KOG2532 Permease of the major 98.0 5E-05 1.1E-09 60.1 9.1 82 41-122 80-189 (466)
132 KOG0255 Synaptic vesicle trans 98.0 6E-05 1.3E-09 60.0 9.5 94 45-139 361-506 (521)
133 PRK14995 methyl viologen resis 98.0 6.7E-05 1.5E-09 59.5 9.7 107 10-122 276-412 (495)
134 TIGR00805 oat sodium-independe 98.0 3.5E-05 7.6E-10 63.1 8.0 101 15-121 55-232 (633)
135 PRK10504 putative transporter; 98.0 7.3E-05 1.6E-09 58.5 9.5 107 10-122 278-414 (471)
136 PRK09528 lacY galactoside perm 98.0 4.8E-05 1E-09 58.8 8.3 52 10-67 27-79 (420)
137 PLN00028 nitrate transmembrane 98.0 3E-05 6.6E-10 61.2 7.2 100 12-118 271-404 (476)
138 PTZ00207 hypothetical protein; 97.9 8.9E-05 1.9E-09 60.2 9.6 101 10-118 44-176 (591)
139 PRK15034 nitrate/nitrite trans 97.9 4.2E-05 9.2E-10 60.4 7.5 111 4-122 263-427 (462)
140 PF11700 ATG22: Vacuole efflux 97.9 0.00018 3.9E-09 57.1 10.0 110 7-122 295-441 (477)
141 TIGR01301 GPH_sucrose GPH fami 97.9 7.8E-05 1.7E-09 59.1 7.9 102 10-117 21-172 (477)
142 TIGR00902 2A0127 phenyl propri 97.8 0.00015 3.3E-09 55.4 8.4 107 8-122 19-153 (382)
143 TIGR00792 gph sugar (Glycoside 97.8 8E-05 1.7E-09 57.5 6.9 98 14-117 20-156 (437)
144 PRK09874 drug efflux system pr 97.8 0.00015 3.2E-09 55.5 8.3 82 41-122 265-372 (408)
145 TIGR00902 2A0127 phenyl propri 97.8 0.00025 5.4E-09 54.2 9.5 107 9-122 221-354 (382)
146 COG2270 Permeases of the major 97.8 7E-05 1.5E-09 58.0 6.3 110 7-122 266-402 (438)
147 TIGR00710 efflux_Bcr_CflA drug 97.8 0.00021 4.6E-09 53.9 8.9 102 10-118 223-356 (385)
148 COG2814 AraJ Arabinose efflux 97.7 0.00032 6.9E-09 54.3 9.2 111 5-122 223-360 (394)
149 PRK11010 ampG muropeptide tran 97.7 0.0003 6.4E-09 55.9 9.2 102 15-122 244-377 (491)
150 TIGR00886 2A0108 nitrite extru 97.7 5.8E-05 1.3E-09 56.8 4.9 93 10-109 242-365 (366)
151 TIGR00792 gph sugar (Glycoside 97.7 0.00036 7.7E-09 53.9 9.2 81 42-122 265-379 (437)
152 TIGR00901 2A0125 AmpG-related 97.7 0.00015 3.2E-09 54.7 6.6 53 10-67 226-278 (356)
153 PRK15011 sugar efflux transpor 97.7 0.00043 9.3E-09 53.1 9.1 107 10-122 32-168 (393)
154 PRK11128 putative 3-phenylprop 97.7 0.0003 6.6E-09 53.7 8.1 107 8-122 19-153 (382)
155 TIGR02718 sider_RhtX_FptX side 97.7 0.00037 8.1E-09 53.3 8.5 61 3-67 11-72 (390)
156 KOG4686 Predicted sugar transp 97.6 0.00012 2.6E-09 54.6 5.2 101 16-122 287-413 (459)
157 PRK09528 lacY galactoside perm 97.6 0.00019 4.2E-09 55.4 6.7 81 42-122 270-377 (420)
158 PRK11043 putative transporter; 97.6 0.00068 1.5E-08 51.9 9.4 105 11-122 221-356 (401)
159 TIGR02718 sider_RhtX_FptX side 97.6 0.00064 1.4E-08 52.0 9.1 104 13-122 228-365 (390)
160 PRK08633 2-acyl-glycerophospho 97.6 0.00043 9.4E-09 59.8 8.9 99 13-117 252-378 (1146)
161 TIGR00892 2A0113 monocarboxyla 97.6 0.00013 2.8E-09 57.3 5.0 104 13-122 261-394 (455)
162 PRK11102 bicyclomycin/multidru 97.5 0.00099 2.1E-08 50.4 9.1 51 11-67 212-263 (377)
163 COG2271 UhpC Sugar phosphate p 97.5 0.00013 2.9E-09 56.6 4.2 106 11-122 270-408 (448)
164 KOG2532 Permease of the major 97.5 0.00044 9.6E-09 54.8 7.2 113 3-121 268-417 (466)
165 TIGR01272 gluP glucose/galacto 97.5 0.00086 1.9E-08 50.2 8.4 104 11-122 158-289 (310)
166 PRK10091 MFS transport protein 97.5 0.00089 1.9E-08 51.1 8.5 100 15-122 221-349 (382)
167 PF05977 MFS_3: Transmembrane 97.4 0.00071 1.5E-08 54.4 7.4 81 41-121 52-163 (524)
168 COG2223 NarK Nitrate/nitrite t 97.3 0.00046 9.9E-09 53.5 5.3 108 7-122 232-374 (417)
169 COG3104 PTR2 Dipeptide/tripept 97.3 0.00023 4.9E-09 56.3 3.1 94 23-122 56-180 (498)
170 PRK09848 glucuronide transport 97.2 0.0014 3.1E-08 51.1 7.0 79 44-122 274-387 (448)
171 PRK15402 multidrug efflux syst 97.2 0.0038 8.2E-08 48.0 9.1 101 15-122 237-369 (406)
172 PRK09669 putative symporter Ya 97.2 0.00098 2.1E-08 52.0 5.8 99 12-117 28-166 (444)
173 PRK10133 L-fucose transporter; 97.2 0.0021 4.5E-08 50.4 7.6 100 14-121 279-405 (438)
174 COG0738 FucP Fucose permease [ 97.2 0.0043 9.3E-08 48.1 9.0 104 15-124 35-167 (422)
175 PRK11128 putative 3-phenylprop 97.2 0.0049 1.1E-07 47.1 9.4 104 12-122 224-354 (382)
176 TIGR00885 fucP L-fucose:H+ sym 97.2 0.0027 5.8E-08 49.4 8.0 79 42-122 277-380 (410)
177 PRK10429 melibiose:sodium symp 97.2 0.0021 4.6E-08 50.7 7.5 100 11-116 24-162 (473)
178 TIGR00882 2A0105 oligosacchari 97.1 0.0034 7.3E-08 48.1 8.1 81 42-122 262-369 (396)
179 PRK10473 multidrug efflux syst 97.1 0.0037 8.1E-08 47.7 8.0 48 14-67 224-272 (392)
180 PRK11462 putative transporter; 97.0 0.0077 1.7E-07 47.5 9.6 81 42-122 271-386 (460)
181 PF13347 MFS_2: MFS/sugar tran 97.0 0.006 1.3E-07 47.4 8.7 108 8-122 240-383 (428)
182 PF13347 MFS_2: MFS/sugar tran 96.9 0.00083 1.8E-08 52.2 3.5 101 15-121 23-164 (428)
183 TIGR00889 2A0110 nucleoside tr 96.9 0.0051 1.1E-07 47.9 7.5 54 8-67 17-72 (418)
184 KOG2533 Permease of the major 96.9 0.0053 1.1E-07 49.1 7.7 83 38-120 85-193 (495)
185 PF06813 Nodulin-like: Nodulin 96.9 0.0033 7.2E-08 45.9 5.8 105 9-121 18-155 (250)
186 PRK10213 nepI ribonucleoside t 96.8 0.018 3.9E-07 44.4 10.1 100 16-122 240-365 (394)
187 PRK09669 putative symporter Ya 96.8 0.0088 1.9E-07 46.7 8.4 81 42-122 272-387 (444)
188 KOG2504 Monocarboxylate transp 96.8 0.0016 3.4E-08 52.2 4.2 101 14-122 67-195 (509)
189 PF03825 Nuc_H_symport: Nucleo 96.8 0.013 2.7E-07 45.7 9.0 106 11-122 225-363 (400)
190 PF05977 MFS_3: Transmembrane 96.8 0.0089 1.9E-07 48.2 8.2 102 15-122 240-368 (524)
191 PRK11652 emrD multidrug resist 96.7 0.012 2.6E-07 45.0 8.4 101 13-120 227-357 (394)
192 PRK11462 putative transporter; 96.7 0.01 2.2E-07 46.9 8.0 100 12-118 28-167 (460)
193 PRK11646 multidrug resistance 96.7 0.0097 2.1E-07 45.9 7.8 41 82-122 318-358 (400)
194 KOG0253 Synaptic vesicle trans 96.7 0.0067 1.5E-07 47.1 6.4 71 42-113 121-216 (528)
195 PRK06814 acylglycerophosphoeth 96.6 0.008 1.7E-07 52.3 7.3 105 11-121 243-394 (1140)
196 PRK11195 lysophospholipid tran 96.6 0.03 6.4E-07 43.1 9.4 102 14-121 226-354 (393)
197 PRK10429 melibiose:sodium symp 96.6 0.018 3.9E-07 45.5 8.4 81 42-122 274-392 (473)
198 PRK11902 ampG muropeptide tran 96.5 0.029 6.4E-07 43.1 9.3 45 17-67 234-279 (402)
199 KOG3764 Vesicular amine transp 96.4 0.0018 4E-08 50.2 2.0 86 37-122 109-221 (464)
200 PF05978 UNC-93: Ion channel r 96.4 0.087 1.9E-06 35.7 9.8 112 3-118 6-146 (156)
201 COG2807 CynX Cyanate permease 96.3 0.036 7.7E-07 42.7 8.4 113 4-122 219-358 (395)
202 KOG2816 Predicted transporter 96.3 0.018 3.8E-07 45.8 7.0 78 45-122 73-173 (463)
203 PRK10054 putative transporter; 95.9 0.027 5.9E-07 43.4 6.3 79 43-122 253-358 (395)
204 PF03825 Nuc_H_symport: Nucleo 95.8 0.036 7.8E-07 43.2 6.3 59 2-66 11-69 (400)
205 PF05631 DUF791: Protein of un 95.7 0.074 1.6E-06 40.8 7.7 34 44-77 79-112 (354)
206 PF11700 ATG22: Vacuole efflux 95.6 0.1 2.3E-06 41.6 8.5 78 39-117 75-208 (477)
207 KOG2504 Monocarboxylate transp 95.6 0.02 4.3E-07 46.1 4.4 110 7-122 312-449 (509)
208 PRK09848 glucuronide transport 95.6 0.098 2.1E-06 40.9 8.2 48 14-67 29-81 (448)
209 COG2211 MelB Na+/melibiose sym 95.5 0.12 2.6E-06 41.1 8.4 80 43-122 281-395 (467)
210 PF01306 LacY_symp: LacY proto 95.4 0.11 2.4E-06 40.7 7.8 51 11-67 25-76 (412)
211 TIGR00788 fbt folate/biopterin 95.2 0.12 2.6E-06 41.0 7.6 80 42-122 296-412 (468)
212 KOG2533 Permease of the major 95.2 0.047 1E-06 43.8 5.2 54 8-67 288-346 (495)
213 KOG2563 Permease of the major 95.0 0.043 9.3E-07 43.3 4.4 84 38-121 83-200 (480)
214 COG2211 MelB Na+/melibiose sym 94.7 0.18 4E-06 40.1 7.2 106 10-122 29-174 (467)
215 PF01306 LacY_symp: LacY proto 94.6 0.29 6.4E-06 38.4 8.1 105 16-122 243-374 (412)
216 TIGR00926 2A1704 Peptide:H+ sy 94.1 0.63 1.4E-05 38.8 9.5 97 19-121 14-148 (654)
217 PF03209 PUCC: PUCC protein; 93.6 0.48 1E-05 37.1 7.5 40 82-121 110-149 (403)
218 PRK15403 multidrug efflux syst 93.6 0.72 1.6E-05 35.8 8.6 27 94-120 344-370 (413)
219 COG2807 CynX Cyanate permease 93.4 0.76 1.6E-05 35.7 8.1 103 13-122 32-159 (395)
220 COG0477 ProP Permeases of the 93.2 0.6 1.3E-05 32.9 7.2 75 42-116 47-151 (338)
221 COG0738 FucP Fucose permease [ 91.2 0.44 9.6E-06 37.3 4.6 103 12-122 255-383 (422)
222 PF06779 DUF1228: Protein of u 91.1 0.93 2E-05 27.5 5.1 51 11-67 10-60 (85)
223 TIGR00788 fbt folate/biopterin 90.8 0.96 2.1E-05 35.9 6.3 38 84-122 143-183 (468)
224 TIGR00769 AAA ADP/ATP carrier 89.6 1.6 3.5E-05 35.0 6.6 41 81-121 149-189 (472)
225 KOG1330 Sugar transporter/spin 88.7 0.85 1.8E-05 36.4 4.4 39 84-122 372-411 (493)
226 KOG3762 Predicted transporter 88.5 0.41 9E-06 38.9 2.6 52 10-67 28-79 (618)
227 KOG2325 Predicted transporter/ 88.3 1.5 3.3E-05 35.2 5.7 83 38-120 75-188 (488)
228 TIGR00805 oat sodium-independe 86.1 0.71 1.5E-05 38.2 2.9 53 6-64 343-397 (633)
229 PRK09584 tppB putative tripept 85.7 3.1 6.6E-05 33.4 6.2 38 80-117 401-438 (500)
230 TIGR01301 GPH_sucrose GPH fami 85.1 6.3 0.00014 31.7 7.7 40 80-119 399-440 (477)
231 PRK10207 dipeptide/tripeptide 84.7 5.3 0.00012 32.0 7.2 37 84-120 402-438 (489)
232 PF06609 TRI12: Fungal trichot 84.5 14 0.0003 30.7 9.4 80 42-121 357-465 (599)
233 KOG0637 Sucrose transporter an 80.1 3.9 8.4E-05 32.8 4.6 49 13-67 52-104 (498)
234 PRK15462 dipeptide/tripeptide 79.4 6.8 0.00015 31.6 5.9 39 80-118 396-435 (493)
235 KOG3098 Uncharacterized conser 79.3 8.8 0.00019 30.8 6.4 76 42-117 58-158 (461)
236 PF03092 BT1: BT1 family; Int 79.3 14 0.0003 29.1 7.6 39 84-122 341-379 (433)
237 TIGR00924 yjdL_sub1_fam amino 79.3 13 0.00027 29.7 7.4 41 80-120 400-440 (475)
238 KOG2881 Predicted membrane pro 79.1 13 0.00027 27.7 6.6 21 123-143 152-173 (294)
239 KOG3626 Organic anion transpor 78.6 5.2 0.00011 33.9 5.2 40 83-122 608-648 (735)
240 KOG3762 Predicted transporter 78.4 7 0.00015 32.2 5.6 63 41-104 413-502 (618)
241 COG2270 Permeases of the major 78.0 5.8 0.00012 31.5 5.0 29 39-67 63-91 (438)
242 PF03137 OATP: Organic Anion T 75.5 0.9 1.9E-05 37.0 0.0 39 84-122 474-513 (539)
243 PF03219 TLC: TLC ATP/ADP tran 74.7 17 0.00036 29.4 6.9 42 81-122 164-205 (491)
244 PTZ00207 hypothetical protein; 71.7 11 0.00024 31.2 5.3 101 7-113 367-503 (591)
245 TIGR01272 gluP glucose/galacto 69.6 11 0.00025 28.1 4.7 42 80-121 29-70 (310)
246 COG5336 Uncharacterized protei 61.6 12 0.00027 23.8 3.0 23 45-67 53-76 (116)
247 KOG2563 Permease of the major 60.0 32 0.00069 27.8 5.6 78 45-122 312-420 (480)
248 KOG2615 Permease of the major 56.0 49 0.0011 26.3 6.0 43 83-125 374-416 (451)
249 PF03092 BT1: BT1 family; Int 54.3 64 0.0014 25.4 6.6 38 84-122 109-149 (433)
250 PF12670 DUF3792: Protein of u 53.7 56 0.0012 20.8 6.3 23 45-67 45-68 (116)
251 COG3104 PTR2 Dipeptide/tripept 51.4 30 0.00065 28.1 4.3 39 80-118 413-451 (498)
252 PF11947 DUF3464: Protein of u 50.5 32 0.0007 23.3 3.8 12 56-67 56-67 (153)
253 KOG3574 Acetyl-CoA transporter 50.1 34 0.00074 27.4 4.3 16 52-67 81-101 (510)
254 PF13940 Ldr_toxin: Toxin Ldr, 47.9 24 0.00051 17.4 2.1 19 42-60 16-34 (35)
255 PF13493 DUF4118: Domain of un 43.3 28 0.0006 21.3 2.5 20 45-64 86-105 (105)
256 PF03137 OATP: Organic Anion T 41.1 9 0.00019 31.3 0.0 47 15-67 25-71 (539)
257 PF06939 DUF1286: Protein of u 39.0 36 0.00077 21.8 2.4 21 47-67 32-52 (114)
258 KOG3098 Uncharacterized conser 38.6 96 0.0021 25.0 5.4 23 45-67 290-315 (461)
259 KOG2816 Predicted transporter 36.3 2.2E+02 0.0048 22.9 7.1 42 80-121 349-390 (463)
260 PF01595 DUF21: Domain of unkn 36.0 1.3E+02 0.0029 20.1 6.4 16 128-143 158-173 (183)
261 COG1268 BioY Uncharacterized c 35.5 33 0.00072 24.0 2.1 22 42-63 90-111 (184)
262 PF08129 Antimicrobial17: Alph 35.1 17 0.00036 19.6 0.4 24 42-65 33-56 (57)
263 KOG4830 Predicted sugar transp 34.9 32 0.00069 26.1 2.0 54 7-67 32-94 (412)
264 PRK03612 spermidine synthase; 34.8 1.7E+02 0.0036 24.0 6.3 27 96-122 144-170 (521)
265 KOG4686 Predicted sugar transp 34.3 3.8 8.3E-05 31.3 -2.8 81 42-122 87-197 (459)
266 PF07698 7TM-7TMR_HD: 7TM rece 32.6 1.7E+02 0.0036 20.1 7.4 23 45-67 108-130 (194)
267 PF11023 DUF2614: Protein of u 30.5 1.5E+02 0.0033 19.0 6.6 18 58-75 5-22 (114)
268 PF03209 PUCC: PUCC protein; 29.5 2.9E+02 0.0063 22.0 9.8 92 23-120 239-360 (403)
269 KOG3764 Vesicular amine transp 29.2 74 0.0016 25.5 3.2 23 45-67 317-339 (464)
270 KOG1479 Nucleoside transporter 28.8 2.1E+02 0.0045 22.8 5.7 31 80-110 362-392 (406)
271 COG3202 ATP/ADP translocase [E 28.7 2.6E+02 0.0057 23.0 6.3 42 81-122 168-209 (509)
272 PF04695 Pex14_N: Peroxisomal 26.4 33 0.00072 22.6 0.9 16 127-142 31-46 (136)
273 PF06963 FPN1: Ferroportin1 (F 26.3 3.4E+02 0.0074 21.7 9.2 29 38-66 297-325 (432)
274 KOG4332 Predicted sugar transp 26.3 47 0.001 25.4 1.7 18 50-67 88-105 (454)
275 PF12273 RCR: Chitin synthesis 25.8 41 0.00088 21.8 1.2 14 52-65 16-29 (130)
276 PF03817 MadL: Malonate transp 25.2 1.1E+02 0.0024 19.9 3.0 21 45-65 99-119 (125)
277 PRK10983 putative inner membra 24.7 2.1E+02 0.0045 22.2 5.1 15 131-145 353-367 (368)
278 PF05298 Bombinin: Bombinin; 24.1 26 0.00055 22.4 0.0 20 126-145 103-122 (141)
279 PF02632 BioY: BioY family; I 23.7 72 0.0016 21.4 2.1 23 42-64 61-83 (148)
280 TIGR00807 malonate_madL malona 22.1 1.7E+02 0.0036 19.1 3.3 21 45-65 99-119 (125)
281 PF03812 KdgT: 2-keto-3-deoxyg 21.7 1.7E+02 0.0036 22.5 3.8 70 50-122 236-307 (314)
282 COG3944 Capsular polysaccharid 21.0 3.1E+02 0.0068 19.9 4.9 46 88-141 167-212 (226)
283 PF11299 DUF3100: Protein of u 20.6 3.5E+02 0.0077 19.9 5.2 77 42-119 147-228 (241)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=9.8e-21 Score=147.52 Aligned_cols=135 Identities=33% Similarity=0.445 Sum_probs=118.4
Q ss_pred hhhhhhchHHHHHhHHHHHhhhCCCCC-cchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------
Q 036778 2 LMQTLGGSTAIAYYASSIFDVASNKLS-TKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------- 67 (145)
Q Consensus 2 ~~~~~~g~~~~~~~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------- 67 (145)
+.||++|++++.+|...++++.|++.+ ..+.+...+ ++.++.++.+.+++||.|||+++
T Consensus 279 ~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g-------~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 279 FAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIG-------IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999621 124555555 99999999999999999999998
Q ss_pred -----------------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-c
Q 036778 68 -----------------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE-W 123 (145)
Q Consensus 68 -----------------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 123 (145)
+.+...+++|.+|++|.+.+|++|++.|+.+.++....+|+++++....+|.+.+ +
T Consensus 352 ~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~ 431 (485)
T KOG0569|consen 352 MSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI 431 (485)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455667889999999999999999999999999999999999999999999887 4
Q ss_pred cC---------------------CCCCCCCHHHHHHHHhhc
Q 036778 124 ST---------------------IETKGRTLEEIQRSIIKF 143 (145)
Q Consensus 124 ~~---------------------pet~~~~l~~i~~~~~~~ 143 (145)
+. ||||+|+.+|+.+.++++
T Consensus 432 g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 432 GPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred cchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 42 999999999999988765
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=2.3e-18 Score=136.23 Aligned_cols=135 Identities=30% Similarity=0.423 Sum_probs=116.3
Q ss_pred ChhhhhhchHHHHHhHHHHHhhhCCCCCc-chhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------
Q 036778 1 MLMQTLGGSTAIAYYASSIFDVASNKLST-KFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------ 67 (145)
Q Consensus 1 ~~~~~~~g~~~~~~~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------ 67 (145)
+.|||++|++.+.+|.+.+++..|.+ +. ...+.+.+ +.+++++.++.+++||+|||+++
T Consensus 303 ~~fqq~tG~~~~~~Y~~~if~~~g~~-~~~~~~~~~~~-------~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 303 QLFQQLTGINYVFYYSTTIFKSAGLK-SDTFLASIILG-------VVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHhCCceEEeehHHHHHhcCCC-CchHHHHHHHH-------HHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 46899999999999999999999997 44 45555555 88899999999999999999998
Q ss_pred ---------------------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---------------------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 ---------------------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.++...++.+.++++|.+.+|++|.+.|+++.+++...+++.+++....++..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788899999999999999999999999999999999998888877
Q ss_pred hhc-c-C----------------------CCCCCCCHHHHHHHHhhc
Q 036778 121 IEW-S-T----------------------IETKGRTLEEIQRSIIKF 143 (145)
Q Consensus 121 ~~~-~-~----------------------pet~~~~l~~i~~~~~~~ 143 (145)
..+ + . ||||++++||+++.++++
T Consensus 455 ~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 455 TEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred HHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 663 2 1 999999999999988765
No 3
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.63 E-value=3.9e-18 Score=132.10 Aligned_cols=131 Identities=28% Similarity=0.425 Sum_probs=104.1
Q ss_pred hhhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------
Q 036778 2 LMQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------- 67 (145)
Q Consensus 2 ~~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------- 67 (145)
++++.+|.+.+.+|.|.+.++.+.+ +....+.+.+ +...++.+++.+++||+|||+++
T Consensus 262 ~~~~~~g~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~ 333 (451)
T PF00083_consen 262 FFQQFSGINFIFYYSPSIFENAGIS-NSFLATLILG-------LVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLIL 333 (451)
T ss_pred ccccccccccccccccccccccccc-cccccccccc-------ccccccccccccccccccccccccccccccccccccc
Confidence 4677889889999999999998886 4434445555 77788888888999999999887
Q ss_pred ----------------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-cc
Q 036778 68 ----------------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE-WS 124 (145)
Q Consensus 68 ----------------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 124 (145)
.++...++.+.++..+.+.+|+||++.|+++.+++...+++++++.+.+.|++.. .+
T Consensus 334 ~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 334 GIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred ccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0111222345557788899999999999999999999999999998888877765 22
Q ss_pred -C---------------------CCCCCCCHHHHHHHH
Q 036778 125 -T---------------------IETKGRTLEEIQRSI 140 (145)
Q Consensus 125 -~---------------------pet~~~~l~~i~~~~ 140 (145)
. ||||++++||++++|
T Consensus 414 ~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 414 GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 1 999999999999875
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.61 E-value=1.8e-14 Score=112.32 Aligned_cols=135 Identities=26% Similarity=0.369 Sum_probs=99.8
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------H---
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------L--- 68 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~--- 68 (145)
++|..+.+.+.+|.|.+.++.|.+ ........ ....+..+++.+++++++||+|||+++ .
T Consensus 281 ~~~~~~~~~~~~~~p~i~~~~g~~--~~~~~~~~----~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~ 354 (479)
T PRK10077 281 FQQFVGINVVLYYAPEIFKTLGAS--TDIALLQT----IIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG 354 (479)
T ss_pred HHHHhChhHHHHHHHHHHHHcCCC--CchHHHHH----HHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHH
Confidence 456667777788899999988885 22111111 133477888999999999999999987 0
Q ss_pred -----------------HHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh-------h--
Q 036778 69 -----------------GYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI-------E-- 122 (145)
Q Consensus 69 -----------------~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-- 122 (145)
.+.+.++.+..+..+.+++|.+|++.|++++++....++++.++++.+.|.+. .
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~ 434 (479)
T PRK10077 355 TAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH 434 (479)
T ss_pred HHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc
Confidence 00011122233667789999999999999999999999999999988888655 1
Q ss_pred ccC--------------------CCCCCCCHHHHHHHHhhc
Q 036778 123 WST--------------------IETKGRTLEEIQRSIIKF 143 (145)
Q Consensus 123 ~~~--------------------pet~~~~l~~i~~~~~~~ 143 (145)
|.. ||||++++||+++.+++.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 435 NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred CccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 211 999999999999988765
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.57 E-value=1.4e-14 Score=114.21 Aligned_cols=127 Identities=19% Similarity=0.242 Sum_probs=88.3
Q ss_pred HHHHhHHHHHhhhCCCCCcc--hh----hhheeh-hhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------HH-
Q 036778 11 AIAYYASSIFDVASNKLSTK--FG----NFRISI-LRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------LG- 69 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~--~~----~~~~~~-~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------~~- 69 (145)
.+..+.|+++++.|.+ ... .. ...... ......++..++.+++++++||+|||+++ ..
T Consensus 306 ~~~~~~p~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 306 GVNLNQKVILSAIGYS-PPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred ccccccHHHHHHHcCC-CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 4445678888888885 221 00 000000 01122355667888999999999999987 00
Q ss_pred ----------------HHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhc----------
Q 036778 70 ----------------YTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEW---------- 123 (145)
Q Consensus 70 ----------------~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 123 (145)
....++.+..+..+.+.+|++|++.|+++.++.+..+++++++++.+.|++.+-
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 464 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTG 464 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccc
Confidence 000112334466788899999999999999999999999999999999877651
Q ss_pred -cC---------------------CCCCCCCHHHHHH
Q 036778 124 -ST---------------------IETKGRTLEEIQR 138 (145)
Q Consensus 124 -~~---------------------pet~~~~l~~i~~ 138 (145)
.. |||+++++||+|+
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELSG 501 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhhC
Confidence 11 9999999999875
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=2.2e-10 Score=88.23 Aligned_cols=125 Identities=32% Similarity=0.462 Sum_probs=90.0
Q ss_pred hhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHHH--
Q 036778 5 TLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGYT-- 71 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~~-- 71 (145)
+..+.+.+.+|.|.+.++.|.+ ....... .....++.+++.++.+++.||+|||+.+ ....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (481)
T TIGR00879 296 QFTGINAIMYYSPTIFENAGVS--TDHAFLV----SIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGIL 369 (481)
T ss_pred HHhCCeehHHHHHHHHHHcCCC--chHHHHH----HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677889888888885 3322222 2255588889999999999999999987 0000
Q ss_pred ------------------------HHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh---cc
Q 036778 72 ------------------------ITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE---WS 124 (145)
Q Consensus 72 ------------------------~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 124 (145)
..++.+..+..+.+.+|.+|++.|+++.++.....++++++++.+.+.+.+ |.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~ 449 (481)
T TIGR00879 370 GASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVG 449 (481)
T ss_pred hhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 011122235556777999999999999999999999999999998887764 33
Q ss_pred C--------------------CCCCCCCHHH
Q 036778 125 T--------------------IETKGRTLEE 135 (145)
Q Consensus 125 ~--------------------pet~~~~l~~ 135 (145)
. ||+++++++|
T Consensus 450 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 450 GVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred ceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 2 9998887765
No 7
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=2.4e-11 Score=92.03 Aligned_cols=72 Identities=10% Similarity=0.182 Sum_probs=60.3
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH---------------------------HHHHHHhhccccchhhhhhcccCCcchhhh
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL---------------------------LGYTITFSKGMVRLPNLIMFETFSINIKGS 97 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~---------------------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~ 97 (145)
+..++|.++.++++||+|||+.+ +...++-+ +...+.|.|.+|++|++.|++
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis-g~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS-GAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh-chheEEEEecCcccchhhhhc
Confidence 88999999999999999999998 11222222 223567899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036778 98 AGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~ 117 (145)
|.|.+..++++|+++.|.+.
T Consensus 471 gvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH
Confidence 99999999999999999776
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.15 E-value=1.3e-10 Score=95.74 Aligned_cols=83 Identities=19% Similarity=0.237 Sum_probs=64.0
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHH---hhccccchhhhhhcccCCcc
Q 036778 40 RHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTIT---FSKGMVRLPNLIMFETFSIN 93 (145)
Q Consensus 40 ~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~---~~~~~~~~~~~~~~e~~p~~ 93 (145)
+.+..++.+++.+++++++||+|||+++ ....+. +..+..+..+.+++|++|++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 3455588899999999999999999988 000011 11122345668899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 94 IKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 94 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.|++++|+..+.+++|+++++.+.+++..
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988876544
No 9
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.15 E-value=1.7e-11 Score=94.71 Aligned_cols=132 Identities=19% Similarity=0.162 Sum_probs=91.8
Q ss_pred HHHHHhHHHHHhhhCCCCCcchh--hhheehhhhhh-hhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFG--NFRISILRHIQ-SLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
+....+...++++.|..++.+.. ....+..+.+. .+..++|.++..+++|++|||++.
T Consensus 321 y~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~ 400 (538)
T KOG0252|consen 321 YGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN 400 (538)
T ss_pred hccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc
Confidence 44555677788877775333211 00111111111 244556888888999999999997
Q ss_pred ------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccC----------
Q 036778 68 ------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEWST---------- 125 (145)
Q Consensus 68 ------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 125 (145)
.+..++...|....++.+.+|.||+++|+++-|++-+.+-+|++++...+.++.+-..
T Consensus 401 ~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~ 480 (538)
T KOG0252|consen 401 QLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVF 480 (538)
T ss_pred cccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHH
Confidence 1222233456666778899999999999999999999999999999988877765111
Q ss_pred -----------------CCCCCCCHHHHHHHHh
Q 036778 126 -----------------IETKGRTLEEIQRSII 141 (145)
Q Consensus 126 -----------------pet~~~~l~~i~~~~~ 141 (145)
|||+++++||+++..+
T Consensus 481 ~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 481 IILAGCMLLGILFTLLIPETKGKSLEEISNEEE 513 (538)
T ss_pred HHHHHHHHHhHheeEEeecccccCHHHhcChhh
Confidence 9999999999976543
No 10
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.14 E-value=6.7e-10 Score=84.90 Aligned_cols=113 Identities=12% Similarity=-0.104 Sum_probs=82.6
Q ss_pred hchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 7 GGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
.+........|.+.+++|.+ ..+..++.+ .+.++..++.+..|+++||+|||+++
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s--~~~~g~~~s----~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 78 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVS--KEELGLLAI----TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFN 78 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 34456667788999999994 544444444 78889999999999999999999987
Q ss_pred ----HHHHHHhhcccc--chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh---ccC
Q 036778 68 ----LGYTITFSKGMV--RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE---WST 125 (145)
Q Consensus 68 ----~~~~~~~~~~~~--~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 125 (145)
...++..+.+.+ .......+|.+|++.|++++++......+|..+++.+.+++.. |+.
T Consensus 79 ~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~ 145 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQL 145 (368)
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 011111122211 2234556899999999999999999999999999888887764 665
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.13 E-value=2.3e-10 Score=90.25 Aligned_cols=110 Identities=17% Similarity=0.127 Sum_probs=72.6
Q ss_pred hchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH-----H---H--H--H
Q 036778 7 GGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG-----Y---T--I--T 73 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~-----~---~--~--~ 73 (145)
.+.+.+..|.|.++++ .|.+ ....... .....++..++.++.++++||+|||+.+.. . . . .
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s--~~~~~~~----~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 337 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYS--EDHGVLI----IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI 337 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666788888864 6774 3222222 224557788888999999999999998700 0 0 0 0
Q ss_pred hh--------------c---cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 74 FS--------------K---GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 74 ~~--------------~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.. . ...+....+.+|++|++.|++++++.+..+..++.+.+.+.+++.+
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~ 403 (490)
T PRK10642 338 NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE 403 (490)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0012234567899999999999999877777777788888777653
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.06 E-value=6.5e-10 Score=83.50 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=81.5
Q ss_pred hhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------
Q 036778 5 TLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------- 67 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------- 67 (145)
+.......+...|.+.+++|.+ .....++ .+.+.+...++.++.|+++||+|||+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~g~s--~~~~~~~----~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 6 NYLDRANLSFAAPMLQEDLGLS--AAQYGYV----FSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA 79 (399)
T ss_pred HHHHHHhhhHhHHHHHHhhCCC--hhhHHHH----HHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH
Confidence 3444466677788888889984 4443333 3377899999999999999999999987
Q ss_pred ------HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ------LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....+.+|.+|++.|++..++......++..+++.+...+.+
T Consensus 80 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 143 (399)
T TIGR00893 80 GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI 143 (399)
T ss_pred cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 1111111111 224456789999999999999999999999998888887776543
No 13
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.05 E-value=7.9e-10 Score=84.43 Aligned_cols=113 Identities=12% Similarity=0.009 Sum_probs=81.7
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------- 67 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------- 67 (145)
+++..+.+....+.|.+.+++|.+ .....+.. +.+.+...++.++.|+++||+|||+.+
T Consensus 13 ~~~~~~~~~~~~~lp~~~~~~~~s--~~~~~~~~----~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 13 LLYPAGIDMYLVGLPRIAADLNAS--EAQLHIAF----SVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHhhhHHHHHHHhCCC--HHHHHHHH----HHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 455667677777889999999884 44433333 367788888999999999999999998
Q ss_pred --------HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 --------LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 --------~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+.+ +..+.+..|.+|++.|++..++.+....++..+++.+...+.
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112222221 345678899999999999999999888888777777766554
No 14
>TIGR00898 2A0119 cation transport protein.
Probab=99.03 E-value=5.9e-10 Score=87.79 Aligned_cols=90 Identities=21% Similarity=0.292 Sum_probs=66.8
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH---------HH------------------HHHHh-hccccchhhhhhcccCCcchhh
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL---------LG------------------YTITF-SKGMVRLPNLIMFETFSINIKG 96 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~---------~~------------------~~~~~-~~~~~~~~~~~~~e~~p~~~R~ 96 (145)
+..+++.++.+++.||+|||+.+ .. ....+ .....+..+.+.+|++|++.|+
T Consensus 366 ~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 366 LVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 77888999999999999999988 00 00000 0111244567889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh-ccC--------------------CCCCCCCHHH
Q 036778 97 SAGSLVTFLHNNSNSLVAYAFNFMIE-WST--------------------IETKGRTLEE 135 (145)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------------pet~~~~l~~ 135 (145)
+++|+..+.+.+++++++.+.. +.. +.. |||++++++|
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 9999999999999999988876 322 110 9999988765
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.03 E-value=8e-10 Score=86.28 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=81.6
Q ss_pred hchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 7 GGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
.+........|.+.+++|.+ .....++ .+.+.++..++.++.+++.||+|||+.+
T Consensus 16 ~~~~~~~~~~p~~~~~~g~s--~~~~~~~----~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 89 (485)
T TIGR00711 16 LDSTIVNVAIPTIAGDLGSS--LSQVQWV----ITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPN 89 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCC--hhhhhHH----HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCC
Confidence 34455666788899999884 4433333 3377899999999999999999999987
Q ss_pred ----HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....++.|.+|++.|+++.++......++..+++.+.+++.+
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 1111122222 124556789999999999999999998888988888888777754
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.02 E-value=4.3e-09 Score=81.36 Aligned_cols=107 Identities=11% Similarity=0.005 Sum_probs=77.1
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
-..+.+..|.+.+++|. +.....++.+ .+.++..++.++.+++.||+|||+.+
T Consensus 24 ~~~~~~~~~~l~~~~~~--s~~~~g~~~s----~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~ 97 (412)
T TIGR02332 24 RINIGFAGLTMGKDLGL--SATMFGLAAT----LFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPE 97 (412)
T ss_pred hhhHHHHHHhhHhhcCC--CHHHHHHHHH----HHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 34455566777778888 4444444444 78889999999999999999999998
Q ss_pred --HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 --LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 --~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
...++..+.+. .+....+++|.+|++.|++.+++......+|..+++.+..++.
T Consensus 98 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 98 SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222 2444567899999999999999999888888888877766553
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.00 E-value=1.9e-09 Score=82.97 Aligned_cols=107 Identities=22% Similarity=0.182 Sum_probs=77.4
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
....+..|.+.+++|.+ +.+..+..+ .+.++..++.++.|+++||+|||+++
T Consensus 35 ~~~~~~~~~i~~~~~~s--~~~~~~~~~----~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 108 (426)
T PRK12307 35 MLIFYIMYLIKADLGLT--DMEGAFLAT----AAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIM 108 (426)
T ss_pred HHHHHHHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 44455667777889984 444443333 67788999999999999999999998
Q ss_pred -HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+. .+....+..|.+|++.|+++.++......+|..+++.+.+.+.+
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 11112222221 23455788999999999999999998888888888877766544
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.97 E-value=6.8e-09 Score=85.67 Aligned_cols=100 Identities=16% Similarity=-0.004 Sum_probs=72.2
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
.+....|.+.++++.+ .....++ .+++.++.+++.+++|+++||+|||+++
T Consensus 185 ~is~ilp~i~~~~gls--~~~~g~l----~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~l 258 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIP--DSGKGML----GLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFF 258 (742)
T ss_pred HHHHHHHHHHHHhCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3455667777788884 4433333 3477899999999999999999999988
Q ss_pred HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 68 ~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
.+..+..+.+ ..+..+.+++|.+|.+.|++.+++..+...+|..+++.+
T Consensus 259 lv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~l 310 (742)
T TIGR01299 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAM 310 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222222 225677899999999999999999888777777666643
No 19
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=5.3e-09 Score=82.27 Aligned_cols=98 Identities=22% Similarity=0.186 Sum_probs=72.4
Q ss_pred HHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------------
Q 036778 16 ASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------------- 67 (145)
Q Consensus 16 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------------- 67 (145)
..++.+..|.+++......+.+..++++.+++++|++..++++||+|||+.+
T Consensus 42 n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~ 121 (485)
T KOG0569|consen 42 NETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLIL 121 (485)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3445566675546666677778889999999999999999999999999777
Q ss_pred HHHHHHhhcccc-chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSKGMV-RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLV 113 (145)
Q Consensus 68 ~~~~~~~~~~~~-~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~ 113 (145)
..++...+.+.. .....|+.|+.|.+.||....+......+|..++
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~ 168 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLG 168 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHH
Confidence 111111111111 3455899999999999999999887777776666
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=98.96 E-value=5.5e-09 Score=79.87 Aligned_cols=102 Identities=17% Similarity=0.031 Sum_probs=73.3
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYT 71 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~ 71 (145)
..|.+.+++|.+ ..+..+..+ .+.+...++.+..++++||+|||+++ ...+
T Consensus 31 ~~~~l~~~~~~s--~~~~g~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 104 (390)
T PRK03545 31 LLSDIAQSFHMQ--TAQVGLMLT----IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISR 104 (390)
T ss_pred chHHHHhHcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 457777888884 544444443 66778888889999999999999998 1111
Q ss_pred HHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+ ..+....+++|.+|.+.|++++++......++..+++.+...+.+
T Consensus 105 ~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 105 IGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 111111 113445788999999999999999998888888888877766544
No 21
>TIGR00895 2A0115 benzoate transport.
Probab=98.96 E-value=4.4e-09 Score=79.51 Aligned_cols=107 Identities=17% Similarity=0.080 Sum_probs=78.6
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
....++.|.+.+++|.+ .....++. +.+.++..++.++.++++||+|||+.+
T Consensus 34 ~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLD--PVQLGFLF----SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQ 107 (398)
T ss_pred HHHHhhHHHHhhccCCC--HHHHHHHH----HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 44556778888888884 44333333 366788899999999999999999988
Q ss_pred -HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+....+.+|.+|.+.|++..++......++..+++.+.+++..
T Consensus 108 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (398)
T TIGR00895 108 LLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP 166 (398)
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh
Confidence 11112222222 24556789999999999999999999899998888888877654
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.94 E-value=5.8e-09 Score=78.89 Aligned_cols=107 Identities=12% Similarity=0.065 Sum_probs=77.2
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|.+ ..+..+..+ .+.++..++.++.|+++||+|||+.+
T Consensus 22 ~~~~~~~p~~~~~~g~s--~~~~g~~~~----~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTP--ASIVQMTLT----LYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIET 95 (385)
T ss_pred HHhcccHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 34444567777888884 444444333 77788999999999999999999988
Q ss_pred -HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+.+ +....+..|.+|++.|++..++......++..+++.+.+++.+
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122222222 3445788999999999999999999888888888887776654
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.93 E-value=9.9e-09 Score=77.92 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=75.4
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|.+ .....++. +.+.++..++.++.|+++||+|||+.+
T Consensus 29 ~~~~~~~~~l~~~~~~s--~~~~g~~~----~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (405)
T TIGR00891 29 FLVALVLAEVAGEFGLT--TVDAASLI----SAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYIT 102 (405)
T ss_pred HHHHHHHHHHHHHhCCC--hhhHHHHH----HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455667777788884 44333333 377789999999999999999999998
Q ss_pred -HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 -LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 -~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+. .+....++.|.+|++.|++..++......+|..+++.+...+.
T Consensus 103 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 103 MFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222221 2344578899999999999999999888888888777766554
No 24
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.93 E-value=7.4e-09 Score=81.90 Aligned_cols=81 Identities=17% Similarity=0.062 Sum_probs=60.3
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------H------------------HHHHHhhcccc---chhhhh
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------L------------------GYTITFSKGMV---RLPNLI 85 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~------------------~~~~~~~~~~~---~~~~~~ 85 (145)
++++...++..++.++.+++.||+|||+.+ . ..++..+.+.+ +....+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~ 139 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAII 139 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 344578899999999999999999999987 0 00111111122 556689
Q ss_pred hcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 86 MFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 86 ~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.+|.+|++.|++++++......+|..+++.+..
T Consensus 140 ~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 140 TSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888887766665544
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.91 E-value=8.2e-09 Score=77.16 Aligned_cols=107 Identities=10% Similarity=-0.015 Sum_probs=75.6
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH-----------H---------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-----------G--------- 69 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-----------~--------- 69 (145)
.......|.+..+.+. +..+..++ .+.+.+...++.++.|+++||+|||+.+. .
T Consensus 16 ~~~~~~~~~~~~~~~~--s~~~~g~~----~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (365)
T TIGR00900 16 AITQVALPLYVLAGTG--SASVLSLA----ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG 89 (365)
T ss_pred HHHHHHHHHHHHHhhc--cHHHHHHH----HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4444556777777777 44444433 34777899999999999999999999980 0
Q ss_pred --------HHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 --------YTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 --------~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+..+.+ ..+....+.+|.+|++.|++..++......++..+++.+..++.+
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA 153 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111 113445788999999999999999999998988888877766654
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.89 E-value=1.8e-08 Score=77.54 Aligned_cols=102 Identities=8% Similarity=-0.052 Sum_probs=75.1
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYT 71 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~ 71 (145)
..|.+.+++|.+ +.+.....+ .+.+...++.++.+.++||+|||+.+ ...+
T Consensus 42 ~l~~~~~~~g~s--~~~~g~~~~----~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 115 (394)
T PRK10213 42 LLTPMAQDLGIS--EGVAGQSVT----VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR 115 (394)
T ss_pred hHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH
Confidence 456677888884 444443333 66688889999999999999999998 1111
Q ss_pred HHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+. .+....+++|.+|++.|+++.++......++..+++.+.+++.+
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222221 24556788999999999999999998888888888888887765
No 27
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.88 E-value=1.6e-08 Score=79.61 Aligned_cols=107 Identities=12% Similarity=-0.051 Sum_probs=72.0
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+......+.|.+.+++|.+ ......+. +.+.++..++.++.|+++||+|||+++
T Consensus 51 ~~~~~~~~~~~l~~~~gls--~~~~g~~~----~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~ 124 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLT--KSDIGNAG----IASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA 124 (476)
T ss_pred HHHHHHHHHHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3344555677888889984 44333332 366788888999999999999999988
Q ss_pred ---HHHHHHhhcccc--chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---LGYTITFSKGMV--RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 ---~~~~~~~~~~~~--~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
....+..+.+.+ .....+++|.+|++.|++++++......++..+++.+.|.+
T Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112221111 12234678999999999999999877777776666555543
No 28
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.85 E-value=4.2e-08 Score=74.97 Aligned_cols=114 Identities=17% Similarity=0.079 Sum_probs=77.6
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+......+.|.+.+++|.+ .........+++.+++.+...++.++.|+++||+|||+.+
T Consensus 29 ~~~~~~~~l~~~~~~~g~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 107 (408)
T PRK09874 29 AFSLVMPFLPLYVEQLGVT-GHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNI 107 (408)
T ss_pred HHHHhhhhHHHHHHHhCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3344555778888888885 3222112223445577888999999999999999999998
Q ss_pred ---HHHHHHhh--ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---LGYTITFS--KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---~~~~~~~~--~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+ .+..+....+..|.+|++.|++..++......++..+++.+.+.+.+
T Consensus 108 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 108 WQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 12223344577889999999999999988888888787777776643
No 29
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.84 E-value=1.2e-08 Score=80.64 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=77.4
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
...+..-.|.+.+++|. +.....+..+ ++.++.....+..|+++||+|||+.+
T Consensus 22 ~tiv~~a~p~i~~~l~~--s~~~~~~~~~----~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~ 95 (495)
T PRK14995 22 ATVLHVAAPTLSMTLGA--SGNELLWIID----IYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTAS 95 (495)
T ss_pred HHHHHHHHHHHHHHhCC--CHhHHHHHHH----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 34455668999999988 4444444444 77788888999999999999999998
Q ss_pred --HHHHHHhhcccc---chhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSKGMV---RLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~~~~---~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+.+ +.......+.+ |++.|+++.++......++..+++.+..++.+
T Consensus 96 ~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 96 WLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111222222222 22233445555 77899999999999999999999998888865
No 30
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.84 E-value=1.9e-08 Score=78.13 Aligned_cols=106 Identities=8% Similarity=-0.027 Sum_probs=77.2
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
....+.|.+.+++|.+ ......+.+ .+.++..++.++.|++.||+|||+.+
T Consensus 41 ~~~~~~~~~~~~~g~s--~~~~g~~~~----~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (434)
T PRK11663 41 SFNAAMPEMLADLGLS--RSDIGLLAT----LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAF 114 (434)
T ss_pred hHHHhhHHHHHhcCCC--HHHHHHHHH----HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455678888888884 444444333 77789999999999999999999987
Q ss_pred HHHHHHhh--cc-ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 LGYTITFS--KG-MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ~~~~~~~~--~~-~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+ .+ ..+....+..|.+|++.|++++++......++..+++.+..++..
T Consensus 115 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 115 ALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11 124455788999999999999999999988998888877776654
No 31
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.83 E-value=2.3e-08 Score=77.41 Aligned_cols=100 Identities=12% Similarity=0.069 Sum_probs=70.8
Q ss_pred HHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHH
Q 036778 17 SSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTIT 73 (145)
Q Consensus 17 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~ 73 (145)
|.+.++++.+ ........+ ++.++..++.++.|+++||+|||+++ ...++.
T Consensus 40 ~~i~~~~~~~--~~~~~~~~s----~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 113 (413)
T PRK15403 40 INVVRDFNAD--VSLAPASVS----LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFI 113 (413)
T ss_pred HHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3455667773 444444434 77889999999999999999999988 111222
Q ss_pred hhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 74 FSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 74 ~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.+. .+..+.+..|.+|.+.|++.+++......++..+++.+...+.+
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 23445778899999999999999888888888887777766554
No 32
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.83 E-value=3.4e-08 Score=73.15 Aligned_cols=109 Identities=18% Similarity=0.071 Sum_probs=79.2
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+........|.+.++.|. +........+ ...+...++.++.|+++||+|||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (352)
T cd06174 14 DRGLLSPALPLLAEDLGL--SASQAGLIVS----AFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSL 87 (352)
T ss_pred hhhhhHhhHHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccH
Confidence 344555667788888877 4444443333 67788999999999999999999987
Q ss_pred ---HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+....+..|.+|++.|++..++......++..+++.+...+.+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222221 24455789999999999999999999999998888887776654
No 33
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.82 E-value=3.2e-08 Score=78.38 Aligned_cols=109 Identities=14% Similarity=0.030 Sum_probs=77.8
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-CChHHH-----------HHH----
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-GRRPLL-----------LGY---- 70 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-grr~~~-----------~~~---- 70 (145)
+.+.+..+.|.++.+ +|.+ ......+.+ .+.....++.+++|+++||+ ||||.+ .+.
T Consensus 24 s~Yg~~~~L~~yL~~~lgls--~~~a~~i~~----~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~ 97 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYD--DNHAYELFS----AYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE 97 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 445566677877765 7884 444443333 66677888999999999999 999987 000
Q ss_pred -----------HHHhhccc-cchhhhhhcccCCcc--hhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 71 -----------TITFSKGM-VRLPNLIMFETFSIN--IKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 71 -----------~~~~~~~~-~~~~~~~~~e~~p~~--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+.+. .+....+.+|++|++ .|+++.++.++..++|+.+++.+.+++.+
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~ 163 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE 163 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh
Confidence 00011111 133457889999986 79999999999999999999999988864
No 34
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.82 E-value=1.5e-08 Score=76.74 Aligned_cols=107 Identities=16% Similarity=0.038 Sum_probs=77.1
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|. +..+.....+ .+.++..++.++.|+++||+|||+.+
T Consensus 8 ~~~~p~~~~~~~~~~~--s~~~~~~~~~----~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 8 DMYLPALPVIAADFGV--SAGSVQMTLS----AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred HHHhccHHHHHHHhCC--CHHHHHHHHH----HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 4444567888888888 4544444433 67788899999999999999999998
Q ss_pred -HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+. .+....+..|.+|++.|++..++......++..+++.+.+.+.+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111112111 13445788999999999999999998888888888877766654
No 35
>TIGR00898 2A0119 cation transport protein.
Probab=98.82 E-value=8.8e-09 Score=81.16 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=64.6
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhccc---cchhhhhhcccC
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKGM---VRLPNLIMFETF 90 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~~---~~~~~~~~~e~~ 90 (145)
+++.+.+.++.+++.++.|+++||+|||+++ ....+..+.+. .+....+++|.+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 209 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFL 209 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheec
Confidence 3445588899999999999999999999988 11222222222 255678899999
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 036778 91 SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEWST 125 (145)
Q Consensus 91 p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (145)
|++.|++..++......+|..+.+.+...+..|+.
T Consensus 210 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~ 244 (505)
T TIGR00898 210 PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRW 244 (505)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999877777777766665544444544
No 36
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.81 E-value=2.5e-08 Score=76.41 Aligned_cols=108 Identities=6% Similarity=-0.073 Sum_probs=77.6
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
.+....+.|.+.++.|.+ ........ +...++..++.+..+++.||+|||+.+
T Consensus 236 ~~~~~~~~p~~~~~~g~s--~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLS--RSQAGLVQ----IAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFA 309 (406)
T ss_pred HHHHHHHHHHHHHhCCCC--hhhhhHHH----HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 344555678888887774 33333332 256688899999999999999999987
Q ss_pred --HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+ .+..+..+.+..|.+|++.|+++.++.+....++..+++.+.+++.+
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 00001111 11124455788999999999999999999999999999999888764
No 37
>PRK10504 putative transporter; Provisional
Probab=98.80 E-value=3.9e-08 Score=76.90 Aligned_cols=110 Identities=17% Similarity=0.086 Sum_probs=79.1
Q ss_pred hchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 7 GGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
.....+....|.+.+++|.+ .....+... .+.++..++.++.++++||+|||+.+
T Consensus 24 ~~~~~~~~~~p~~~~~~g~s--~~~~~~~~~----~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~ 97 (471)
T PRK10504 24 LDTTIVNTALPSMAQSLGES--PLHMHMVIV----SYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGT 97 (471)
T ss_pred HhHHHHHHHHHHHHHHhCcC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34455666789999999984 443333333 66788888999999999999999987
Q ss_pred ----HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+....++.|.+|++.|+++.++......++..+++.+...+.+
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 11112222222 24455678899999999999999998888888888877776654
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.79 E-value=4e-08 Score=75.06 Aligned_cols=105 Identities=8% Similarity=-0.099 Sum_probs=72.5
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
......|.+.+++|.+ ....... .+.+.++..++.++.|++.||+|||+++
T Consensus 21 ~~~~~l~~~~~~~g~s--~~~~g~~----~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l 94 (382)
T PRK10091 21 GIMGVLTELAHDVGIS--IPAAGHM----ISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLML 94 (382)
T ss_pred HHHhChHHHHHHcCCC--HHHHhHH----HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3445667788888884 4433333 3377899999999999999999999998
Q ss_pred HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+.+ +....+..|.+|++.|++.+++......++..+++.+..++.
T Consensus 95 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 95 AIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 112222222211 333467789999999999999888777777777666555544
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.79 E-value=1.7e-08 Score=77.75 Aligned_cols=122 Identities=11% Similarity=-0.084 Sum_probs=85.9
Q ss_pred HHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 12 IAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 12 ~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
...+.|.+.++ .|.+ +.....+. ++..++..++.++.+++.||.++++.+
T Consensus 242 ~~~~~p~~~~~~~g~~--~~~~g~~~----~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T PRK10489 242 VRVLYPALADEVWQMG--AAQIGLLY----AAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILA 315 (417)
T ss_pred HHHhhHHHHHhccCCC--hhHhHHHH----HHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHH
Confidence 34466777777 7774 43333322 356688889999999999998777654
Q ss_pred HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccC------------------
Q 036778 68 LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE-WST------------------ 125 (145)
Q Consensus 68 ~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------ 125 (145)
....+.++.+.+ +....+..|..|.+.|+++.++......++..+++.+.+++.+ ++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 011111111111 3334678899999999999999999999999999999988876 222
Q ss_pred ----CCCCCCCHHHHHHH
Q 036778 126 ----IETKGRTLEEIQRS 139 (145)
Q Consensus 126 ----pet~~~~l~~i~~~ 139 (145)
||+|++++||+|+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 396 LLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHhcccccccccccccCC
Confidence 99999999998864
No 40
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.79 E-value=3.5e-08 Score=75.86 Aligned_cols=104 Identities=11% Similarity=-0.076 Sum_probs=73.3
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------HHHHH
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------LGYTI 72 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------~~~~~ 72 (145)
....+.+.++++.+ .....++ .+++.+...+..++.|+++||+|||+++ ....+
T Consensus 23 ~~~~~~~~~~~~~s--~~~~~~~----~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~~~~r~ 96 (393)
T PRK11195 23 LFAAIALLKELHYP--DWSQPLL----QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHPLLAYG 96 (393)
T ss_pred HHHHHHHHHHcCCc--HHHHHHH----HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556677773 4333333 3478899999999999999999999988 01111
Q ss_pred Hhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 73 TFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 73 ~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+.+ ..|...++++|++|++.|+++.++......++..+++.+.+++.+
T Consensus 97 l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 97 LVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11221 125566789999999999999999988888887777777665554
No 41
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.78 E-value=9.9e-08 Score=74.57 Aligned_cols=79 Identities=19% Similarity=0.127 Sum_probs=58.0
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH-----------------------------------HHHHhhcccc---
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG-----------------------------------YTITFSKGMV--- 79 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~-----------------------------------~~~~~~~~~~--- 79 (145)
++.+.+.++..+++++.|+++||+|||+++.. .++..+.+.+
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 44558889999999999999999999999800 0011111111
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
+...++++|.+|++.|++.+++......+|..+.+..
T Consensus 139 ~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~ 175 (479)
T PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFV 175 (479)
T ss_pred hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4456789999999999999999887777776665443
No 42
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.78 E-value=6.5e-08 Score=72.82 Aligned_cols=109 Identities=18% Similarity=0.049 Sum_probs=73.0
Q ss_pred hhchHHHHHhHHH-HHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------
Q 036778 6 LGGSTAIAYYASS-IFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------- 67 (145)
Q Consensus 6 ~~g~~~~~~~~~~-i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------- 67 (145)
.........+.|. +.+++|.+ .....++.+ .+.++..++.++.|+++||+|||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s--~~~~~~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~ 87 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLS--TAQLGNLVA----VPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA 87 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCC--HHHhhHhhH----HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 3344555666774 66778984 544444443 77799999999999999999999988
Q ss_pred -------HHHHHHhhc--cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 -------LGYTITFSK--GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 -------~~~~~~~~~--~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
....+..+. +..+....+++|.+|++.|++..++......++..+++.+.+.+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 88 VQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred hhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 011111111 11133456888999999999999998866666666655555433
No 43
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.78 E-value=5.4e-08 Score=75.56 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=65.1
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH-----H--HH--HH--h-
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-----G--YT--IT--F- 74 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-----~--~~--~~--~- 74 (145)
+.+....|.|.++++ .|.+ ......... ...++..++.++.++++||+|||+.+. . .. .. .
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s--~~~~~~~~~----i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMH--ANVASGIMT----AALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ 331 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556678888764 6774 332222222 334566777888899999999999770 0 00 00 0
Q ss_pred -----------------hccc-cchhhhhhcccCCcchhhhHHHHHHHHHHHH-HHHHHHHHHHH
Q 036778 75 -----------------SKGM-VRLPNLIMFETFSINIKGSAGSLVTFLHNNS-NSLVAYAFNFM 120 (145)
Q Consensus 75 -----------------~~~~-~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~ 120 (145)
..+. .+..+.+.+|.+|++.|++++|+.+..++.. +...+.+...+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 332 NVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 0000 1234567889999999999999999776642 33355544444
No 44
>PRK15075 citrate-proton symporter; Provisional
Probab=98.77 E-value=4.5e-08 Score=76.04 Aligned_cols=112 Identities=14% Similarity=0.063 Sum_probs=73.5
Q ss_pred hhhchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH-------HHH--HH-
Q 036778 5 TLGGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-------GYT--IT- 73 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-------~~~--~~- 73 (145)
+..+.+.+..|.|.++++ .|.+ ....... ...+.++.+++.+..++++||+|||+.+. ... ..
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~--~~~~~~~----~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLS--AADSLLV----TLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344566677889999886 6884 3332222 22555788899999999999999999870 000 00
Q ss_pred -----------------hhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 74 -----------------FSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 74 -----------------~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
.+.+ ..+..+.+.+|.+|++.|+++.++.+.++.. ++.+++.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 0000 0123456788999999999999997655554 46667777766654
No 45
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.76 E-value=7.4e-08 Score=74.20 Aligned_cols=105 Identities=16% Similarity=0.098 Sum_probs=74.0
Q ss_pred HHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 12 IAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 12 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
+..+.|.++++.|.+ ....... .+...++.+++.++.+++.||+|||+.+ .
T Consensus 250 ~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFD--TGVVSNL----MTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 455678888877774 3332222 2356688899999999999999999987 0
Q ss_pred HHHHHhh-----ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 GYTITFS-----KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ~~~~~~~-----~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....++ .+..+..+.++.|.+|++.|++++|+......+++.+++.+..++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 0000111 11123345677899999999999999999999999888888877665
No 46
>PRK09952 shikimate transporter; Provisional
Probab=98.76 E-value=8.1e-08 Score=74.83 Aligned_cols=109 Identities=11% Similarity=0.090 Sum_probs=69.2
Q ss_pred chHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH-------H----H-H---
Q 036778 8 GSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-------G----Y-T--- 71 (145)
Q Consensus 8 g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-------~----~-~--- 71 (145)
+.+....+.|.+.+ +.|.+ ........ ....+...++.++.++++||+|||+.+. . + .
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s--~~~~~~~~----~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 338 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLP--RELFLNIG----LLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE 338 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556777665 47774 32211111 1233667778889999999999999770 0 0 0
Q ss_pred ------------HHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHH-HHHHHHHHHHHHHhh
Q 036778 72 ------------ITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHN-NSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ------------~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 122 (145)
...+.+ ..+..+.+.+|.+|++.|+++.++.+..+. +++.+.|.+.+++.+
T Consensus 339 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 339 AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001 013356788999999999999999876654 677788888777754
No 47
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.75 E-value=6.7e-08 Score=74.19 Aligned_cols=102 Identities=12% Similarity=0.001 Sum_probs=70.7
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYT 71 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~ 71 (145)
..|.+.++++.+ ........+ .+.++..++.++.|.++||+|||+.+ ....
T Consensus 35 ~~~~~~~~~~~s--~~~~~~~~~----~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (406)
T PRK15402 35 GMLAVVEDFNAG--AEWVPTSMT----AYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR 108 (406)
T ss_pred chHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 445666778884 444444333 67788999999999999999999998 1111
Q ss_pred HHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+. .+..+.+..|.+|++.|.+..++......++..+++.+..++.+
T Consensus 109 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 162 (406)
T PRK15402 109 FLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH 162 (406)
T ss_pred HHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112111 24456778899999999999998887777777777776665544
No 48
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.74 E-value=7.1e-08 Score=73.87 Aligned_cols=104 Identities=17% Similarity=0.078 Sum_probs=73.4
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
......|.+.+++|. +..+...+.+ .+.++..++.++.|+++||+|||+++
T Consensus 33 ~~~~~~~~~~~~~~~--s~~~~g~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (406)
T PRK11551 33 SAGVAAPRMAQEFGL--DVAQMGWAFS----AGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSL 106 (406)
T ss_pred HHHHHHHHHHHHhCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344556777788888 4544444333 77788999999999999999999998
Q ss_pred HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 ~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
....+..+.+. .+....++.|.+|++.|++++++......++..+++.+...+
T Consensus 107 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 107 LVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222221 134457889999999999999999888878777776665443
No 49
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.74 E-value=6e-08 Score=72.24 Aligned_cols=109 Identities=17% Similarity=0.105 Sum_probs=77.5
Q ss_pred chHHHHHhHH-HHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------H---------
Q 036778 8 GSTAIAYYAS-SIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------L--------- 68 (145)
Q Consensus 8 g~~~~~~~~~-~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------~--------- 68 (145)
+........| .+.+++|.+ ..+..++.+ .+.+...++.++.|+++||+|||+++ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~s--~~~~~~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 84 (352)
T PF07690_consen 11 GFSIISPALPLYLAEELGLS--PSQIGLLFS----AFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASN 84 (352)
T ss_dssp HHHHHHHHHH-HHHCCSTTT--SHCHHHHHH----HHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhh
Confidence 3344455566 566778884 444444333 77889999999999999999999987 0
Q ss_pred -----HHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 -----GYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 -----~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
...+..+.+ ..+....++.|.+|++.|++..++......++..+++.+.+++.+
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 146 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS 146 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh
Confidence 000011111 124455788999999999999999999999999999988888763
No 50
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.74 E-value=1.4e-07 Score=74.44 Aligned_cols=108 Identities=15% Similarity=0.017 Sum_probs=67.5
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------H--
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------L-- 68 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------~-- 68 (145)
....+..|.+.++++.+.++.........+.++..++..++.++.|++.||+|||+++ .
T Consensus 33 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~ 112 (490)
T PRK10642 33 GVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYAT 112 (490)
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence 3444556666666654312221111110112466688889999999999999999998 0
Q ss_pred ----------HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 69 ----------GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 69 ----------~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
..++..+.+.+ +....+++|.+|++.|++..++......+|..+++.+.
T Consensus 113 ~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 113 IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 01112222222 44567899999999999999988766666666555443
No 51
>PRK10054 putative transporter; Provisional
Probab=98.73 E-value=9.2e-08 Score=73.58 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=77.0
Q ss_pred hhchHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------
Q 036778 6 LGGSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------- 67 (145)
Q Consensus 6 ~~g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------- 67 (145)
..+......+.|.+++ ++|. +.....+..+ .+.++..++.++.|+++||+|||+++
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s----~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSL--SVDLIGYAMT----IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 3444555556666664 5788 4544444333 66788888999999999999999987
Q ss_pred ------HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ------LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+ ..+....+.+|..|++.|+++.++.....+++..+++.+.+++..
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 94 NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011111 113345677899999999999999999999999988888887654
No 52
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.73 E-value=5.8e-08 Score=75.10 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=76.7
Q ss_pred hhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------
Q 036778 4 QTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------- 67 (145)
Q Consensus 4 ~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------- 67 (145)
++..+.+.+..|.|.++++.+.+.+........ +.+.++..++.+..++++||++||+..
T Consensus 253 ~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~----~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~ 328 (412)
T TIGR02332 253 CLTNTLSAINIWTPQILQSFNQGSSNIMIGLLA----AIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHh----hHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH
Confidence 344456667789999998753321333333222 366788999999999999999977742
Q ss_pred -----HHH---HHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGY---TITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~---~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
... ......+. .+..+....|.+|++.|+++.|+.+..+++++++++.+.+.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 329 ATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred hcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 000 00001111 12233455688999999999999999999999999988776653
No 53
>PRK15075 citrate-proton symporter; Provisional
Probab=98.73 E-value=1.9e-07 Score=72.52 Aligned_cols=111 Identities=14% Similarity=0.012 Sum_probs=68.5
Q ss_pred hhhchHHHHHhHHHHHhhhCCCCCcchhhhheeh-hhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------
Q 036778 5 TLGGSTAIAYYASSIFDVASNKLSTKFGNFRISI-LRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------- 67 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------- 67 (145)
+......+.++.|.+.++++.+ +.....+..+. ......+...+++++.|+++||+|||+.+
T Consensus 27 ~~~d~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~ 105 (434)
T PRK15075 27 EMFDFFLFGFYATAIAKTFFPA-GNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAF 105 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHh
Confidence 3344456778889999998885 33322222110 00111233346788999999999999998
Q ss_pred ---H------------HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---L------------GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 68 ---~------------~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
. ..++..+.+.+ +....+.+|.+|++.|++.+++.....+++..+++.+
T Consensus 106 ~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 106 VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 0 01112222222 3345789999999999999999877666655544443
No 54
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.70 E-value=1.3e-07 Score=74.27 Aligned_cols=107 Identities=11% Similarity=0.075 Sum_probs=75.9
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|.+ ......+.+ .+.++..++.++.|+++||+|||+.+
T Consensus 37 ~~~~~~~~~i~~~~~~s--~~~~~~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (496)
T PRK03893 37 VLITLVLTEVQGEFGLT--TVQAASLIS----AAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWT 110 (496)
T ss_pred HHHHHHHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34445567777888884 443333333 66788899999999999999999987
Q ss_pred -HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....+..|.+|.+.|+++.++......++..+++.+..++..
T Consensus 111 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 111 LFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1111111111 123445678999999999999999998888888888887776654
No 55
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=6.6e-08 Score=76.76 Aligned_cols=86 Identities=19% Similarity=0.164 Sum_probs=66.5
Q ss_pred hhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHh---hccccchhhhhhcccCCc
Q 036778 39 LRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITF---SKGMVRLPNLIMFETFSI 92 (145)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~---~~~~~~~~~~~~~e~~p~ 92 (145)
..+.+.++.++|+++.|.++||+|||+++ ..+++.. ..+.....+.+.+|++++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~ 202 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP 202 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCc
Confidence 34478899999999999999999999998 2222222 233335677899999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhh-ccC
Q 036778 93 NIKGSAGSLVTFLHNNSNSLVAYAFNFMIE-WST 125 (145)
Q Consensus 93 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 125 (145)
+.|+.+..+ ....+.++.+.+....++.. |++
T Consensus 203 ~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~ 235 (521)
T KOG0255|consen 203 KQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRW 235 (521)
T ss_pred chhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999 77777777777777776665 766
No 56
>PRK03699 putative transporter; Provisional
Probab=98.70 E-value=1.9e-07 Score=71.65 Aligned_cols=105 Identities=5% Similarity=-0.018 Sum_probs=73.0
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
......|.+.+++|.+ ........+ .+.++..++.++.+++.||+|||+++
T Consensus 25 ~~g~~~~~i~~~~~~s--~~~~g~~~s----~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~ 98 (394)
T PRK03699 25 VTGMVMGPIAEYFNLP--VSSMSNTFT----FLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALF 98 (394)
T ss_pred HHhhhhHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHH
Confidence 4445567788888884 444443333 67788999999999999999999998
Q ss_pred HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+ ..+....+++|.+|++.|++..++......+++.+.+.+..++.
T Consensus 99 ~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 99 SIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 11344567889999999999998887777777777777766553
No 57
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.70 E-value=2.3e-08 Score=75.03 Aligned_cols=101 Identities=12% Similarity=-0.114 Sum_probs=73.4
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
.........|.+.+++|.+ .....++ .+.+.++..++.++.|+++||+|||+.+
T Consensus 10 ~~~~~~~~~~~~~~~~g~s--~~~~g~~----~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLS--KTDLGLL----LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred hHHhhhhhhHHHHHHhCCC--HhHHHHH----HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence 3445556678888888984 4444433 3377789999999999999999999988
Q ss_pred ---HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHH
Q 036778 68 ---LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVA 114 (145)
Q Consensus 68 ---~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~ 114 (145)
....+..+.+ ..+....+.+|.+|++.|++..++......++..+++
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence 1111111221 2255567899999999999999998888888887777
No 58
>TIGR00895 2A0115 benzoate transport.
Probab=98.70 E-value=1.3e-07 Score=71.40 Aligned_cols=107 Identities=10% Similarity=-0.039 Sum_probs=74.9
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+......+.|.+.++.|.+ ........ +...++..++.++.+++.||+|||+..
T Consensus 265 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGFS--LSLAATGG----ALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 3445556778777778874 43333322 356688899999999999999999655
Q ss_pred ---HHHHHHhhc---cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---LGYTITFSK---GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 ---~~~~~~~~~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.......+. ...+..+.+..|.+|++.|+++.|+......++..+++.+..++
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 000011111 11244567889999999999999999999999998888877654
No 59
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.69 E-value=1.2e-07 Score=74.43 Aligned_cols=107 Identities=8% Similarity=-0.047 Sum_probs=72.5
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------H-----------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------L----------- 68 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------~----------- 68 (145)
.....+.|.++++ .|.+ ........ +.+.++..++.+++|+++||+|||+.. .
T Consensus 275 ~~~~~~~p~yl~~~~g~s--~~~a~~~~----~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 348 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFS--KEDAINTF----TLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATS 348 (467)
T ss_pred HHHHHHHHHHHHHccCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 4456678888765 7884 44333332 356688999999999999999998865 0
Q ss_pred -----HHHHHhhcc-ccc--hhhhhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 69 -----GYTITFSKG-MVR--LPNLIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 69 -----~~~~~~~~~-~~~--~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
...+..+.. .++ .......|.+|++.|+++.|+.+..+++ ++++.+.+.+++.+
T Consensus 349 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 349 EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 000000100 011 1124567999999999999999988886 66788888877766
No 60
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.68 E-value=1.4e-07 Score=72.78 Aligned_cols=81 Identities=16% Similarity=0.069 Sum_probs=61.9
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhhcccc---chhhhhhc
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFSKGMV---RLPNLIMF 87 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~~~~~---~~~~~~~~ 87 (145)
+++.+.+.++..++.++.|+++||+|||+++ ....+..+.+.+ +....+++
T Consensus 74 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 153 (481)
T TIGR00879 74 GLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLS 153 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHH
Confidence 3445588899999999999999999999987 001111122222 34567899
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 88 ETFSINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 88 e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
|.+|++.|++++++......+|..+++.+.
T Consensus 154 ~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 154 EIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred ccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888888776
No 61
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.67 E-value=1.9e-07 Score=69.93 Aligned_cols=102 Identities=12% Similarity=0.005 Sum_probs=70.9
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HH--
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LG-- 69 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~-- 69 (145)
+.+.+.++.+.+ ........ +.+.+...++.+..+++.||+|||+.+ ..
T Consensus 227 ~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T TIGR00890 227 LYKPYGQSLGLS--DGFLVLAV----SISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLA 300 (377)
T ss_pred HHHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHH
Confidence 445556667763 33322222 356688899999999999999999877 00
Q ss_pred HHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 YTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+. .+....+.+|.+|++.|++..|+......++..+++.+.+.+.+
T Consensus 301 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 301 TVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001111111 13334678899999999999999999999999999988887754
No 62
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.67 E-value=2.3e-07 Score=70.47 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=72.4
Q ss_pred hHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------------------H---
Q 036778 15 YASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------------------G--- 69 (145)
Q Consensus 15 ~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------------------~--- 69 (145)
+.|.+.+ +.|.+ ......+. +...++..++.++.+++.||+|||+.+. .
T Consensus 260 ~~~~~~~~~~g~s--~~~~~~~~----~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (405)
T TIGR00891 260 LLPTYLKADLGLS--PHTVANIV----VFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGL 333 (405)
T ss_pred hhHHHHHHHhCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 4455554 46773 43333332 2566888999999999999999999770 0
Q ss_pred ---HHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 ---YTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ---~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+..+..+.+..|.+|++.|+++.|+.+....++..+++.+.+++.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001112224455788999999999999999999999999999999888765
No 63
>PRK12382 putative transporter; Provisional
Probab=98.67 E-value=1.3e-07 Score=72.14 Aligned_cols=97 Identities=14% Similarity=0.003 Sum_probs=66.6
Q ss_pred HhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH----HH------------------------
Q 036778 20 FDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG----YT------------------------ 71 (145)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~----~~------------------------ 71 (145)
.+++|. +..+..++.+ .+.+...+++++.|+++||+||||.+.. ..
T Consensus 43 ~~~lg~--s~~~~g~~~s----~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 43 HHDLGF--GNTMVGIAVG----IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred HHhcCC--cHHHHHHHHH----HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 456888 4544444444 7889999999999999999999999810 00
Q ss_pred ---HHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ---ITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ---~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+.+ +....+..|.+|++.|++++++.......+..+++.+.+++..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 00111111 2223466799999999999999887777777777777666544
No 64
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.67 E-value=1.3e-07 Score=70.98 Aligned_cols=109 Identities=17% Similarity=0.077 Sum_probs=76.5
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChH--HH-----------------
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRP--LL----------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~--~~----------------- 67 (145)
.......+.|.+.++ .|. +........ +...++..++.+..+++.||++||+ ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGL--SILEAGFMA----SLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLM 303 (399)
T ss_pred HHHHHHHHHHHHHHHHhcc--cHHHhhHHH----HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 334555667777765 666 343333322 3566888999999999999999996 11
Q ss_pred --------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.........+..+..+.+.+|.+|++.|+++.++...+..++..+++.+.+++.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~ 372 (399)
T TIGR00893 304 FATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA 372 (399)
T ss_pred HHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc
Confidence 0001111122245667889999999999999999999999999999998887754
No 65
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.65 E-value=4.5e-07 Score=70.45 Aligned_cols=106 Identities=13% Similarity=-0.078 Sum_probs=63.9
Q ss_pred HHHHHhHHHHHhhhCCC-CCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------H---------
Q 036778 10 TAIAYYASSIFDVASNK-LSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------L--------- 68 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~--------- 68 (145)
..+.+..|.+.++++.+ .+........+ +.+...++..++.+++|+++||+|||+.+ .
T Consensus 39 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 117 (432)
T PRK10406 39 YVYSFCSLYFAHIFFPSGNTTTQLLQTAG-VFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYE 117 (432)
T ss_pred HHHHHHHHHHHHHhCCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCch
Confidence 44555666677776531 01211111111 11244466668999999999999999988 0
Q ss_pred -----------HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 69 -----------GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 69 -----------~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
..++..+.+.+ +....+++|.+|++.|++..++.......|..+++.+
T Consensus 118 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 118 TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 01111122222 5556899999999999999888766655555555443
No 66
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.64 E-value=1.6e-07 Score=72.16 Aligned_cols=104 Identities=8% Similarity=0.017 Sum_probs=73.7
Q ss_pred HHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 12 IAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 12 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
+....|.+.+++|.+ ..+..+.. +.+.++..++++..++++||+|||+++ .
T Consensus 28 ~~~~lp~i~~~~~~s--~~~~g~~~----s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll 101 (393)
T PRK09705 28 VGPLLPQLRQASGMS--FSVAALLT----ALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLL 101 (393)
T ss_pred cchhHHHHHHHhCCC--HHHHHHHH----HHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHH
Confidence 445678888889984 44444443 378889999999999999999999999 1
Q ss_pred HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..++..+.+.+ +....++.|.+| +.|++.+++.......|..+++.+.|++.+
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222 233467788887 779999999888777777787777776543
No 67
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.61 E-value=2.1e-07 Score=71.00 Aligned_cols=107 Identities=6% Similarity=-0.110 Sum_probs=75.2
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
..+..+.|.+.+++|. +..+..++. +.+.++..++.++.++++||+|||+.+
T Consensus 23 ~~~~~~lp~~~~~~~~--s~~~~G~~~----s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (381)
T PRK03633 23 AVLNTLVPLWLAQEHL--PTWQVGVVS----SSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWS 96 (381)
T ss_pred hhHHHHHHHHHHHcCC--CHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 4455678888888888 454444444 488899999999999999999999988
Q ss_pred -HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+.+ +.......+..|.+.|++.++.......+|..+++.+.+.+..
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 111122222221 2222345677888899999999988888888888877766543
No 68
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.60 E-value=5.4e-07 Score=66.72 Aligned_cols=112 Identities=16% Similarity=0.106 Sum_probs=80.9
Q ss_pred hhhchHHHHHhHHHHHhhh-CCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChH-HH---------------
Q 036778 5 TLGGSTAIAYYASSIFDVA-SNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRP-LL--------------- 67 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~-~~--------------- 67 (145)
...+......+.|.+.++. +. +........ +...++..++.++.+++.||+|||+ .+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 187 LSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLL----SLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 3445566667788888774 66 343333332 3666889999999999999999998 55
Q ss_pred --------HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --------LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+ ....+....+..|..|++.|++..++......++..+++.+.+++.+
T Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 261 LAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 01111111 12235567889999999999999999999999999999999888764
No 69
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.60 E-value=3.2e-07 Score=71.75 Aligned_cols=88 Identities=8% Similarity=-0.087 Sum_probs=67.2
Q ss_pred heehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------------HHHHHHhhccc---cchhhhhh
Q 036778 35 RISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------------LGYTITFSKGM---VRLPNLIM 86 (145)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------------~~~~~~~~~~~---~~~~~~~~ 86 (145)
..+++.+.+.++..++.++.|+++||+|||+.+ ....+..+.+. .+....+.
T Consensus 77 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~ 156 (465)
T TIGR00894 77 LQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKII 156 (465)
T ss_pred HhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHH
Confidence 334556688899999999999999999999988 01111112221 14455789
Q ss_pred cccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 87 FETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 87 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+|.+|++.|++..++......++..+++.+.+++..
T Consensus 157 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~ 192 (465)
T TIGR00894 157 VKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE 192 (465)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999889999888888877653
No 70
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.60 E-value=3.1e-07 Score=72.80 Aligned_cols=109 Identities=10% Similarity=0.034 Sum_probs=73.5
Q ss_pred chHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh-hCChHHH------------------
Q 036778 8 GSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK-FGRRPLL------------------ 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~grr~~~------------------ 67 (145)
+.+....+.+.+++ ++|.+ ......+.+ .+.....+..+++|+++|| +||||++
T Consensus 29 ~~y~~~~~l~~yl~~~lg~~--~~~a~~i~~----~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~ 102 (489)
T PRK10207 29 GYYGVQGILAVFFVKQLGFS--QEQAFITFG----AFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL 102 (489)
T ss_pred HHHHHHHHHHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444445555554 58884 443343333 5556666677899999999 9999998
Q ss_pred ----HH--HHHHhhccc---cchhhhhhcccCCcch--hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----LG--YTITFSKGM---VRLPNLIMFETFSINI--KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----~~--~~~~~~~~~---~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+ .+...+.+. .+....+++|.+|++. |.++.++.+...++|..+++.+.|++.+
T Consensus 103 ~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 103 LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 111222222 2445688999998874 5778889999999999999988888876
No 71
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.59 E-value=1.2e-07 Score=61.23 Aligned_cols=81 Identities=20% Similarity=0.132 Sum_probs=61.9
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhcc---ccchhhhhhcccCCcchh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKG---MVRLPNLIMFETFSINIK 95 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R 95 (145)
.+.++..++.+..+++.||+|||+.+ .......+.+ ..+....+..|.+|++.|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 45578889999999999999999998 0111111111 124456788999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 96 GSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
++..++......++..+++.+.+.+.+
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 999999999999999998888877754
No 72
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.59 E-value=4.7e-07 Score=70.76 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=67.5
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh--CChHHH--------HH----H----
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF--GRRPLL--------LG----Y---- 70 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--grr~~~--------~~----~---- 70 (145)
+....|.|.++++ .|.+ ........ +.+.++..++.++.|+++||+ +||+.. .. +
T Consensus 270 ~~~~~~~P~~l~~~~g~s--~~~~~~~~----~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~ 343 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFA--LDKSSWAY----FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP 343 (452)
T ss_pred HHHHHHHHHHHHHhcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 4556688898876 5774 33333222 245577888999999999999 555422 00 0
Q ss_pred --------HHHhhccc---cc--hhhhhhcccCCcchhhhHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 036778 71 --------TITFSKGM---VR--LPNLIMFETFSINIKGSAGSLVTFLHNNSNSL-VAYAFNFMIE 122 (145)
Q Consensus 71 --------~~~~~~~~---~~--~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 122 (145)
...+..+. ++ ....+..|.+|++.|+++.|+.+....+++.+ ++.+.+++.+
T Consensus 344 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~ 409 (452)
T PRK11273 344 AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 409 (452)
T ss_pred ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 00000111 11 11235679999999999999999888887665 5777766654
No 73
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.58 E-value=4.7e-07 Score=69.78 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=75.7
Q ss_pred hchHHHHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------
Q 036778 7 GGSTAIAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------ 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------ 67 (145)
.+.+.+..+.|..+ ++.|. +.....+..+ .+.+...+..++.|+++||+|||+.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~----~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~ 97 (400)
T PRK11646 24 LGFFVVFPLISIRFVDQLGW--AAVMVGIALG----LRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCC--cHHHHHHHHH----HHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc
Confidence 34455555666554 55788 4554444443 56677777789999999999999998
Q ss_pred -----HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....++.|.+|++.|+++.++......++..+++.+.+++..
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111211 113345678899999999999999999999998888887776655
No 74
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.58 E-value=5.2e-07 Score=69.43 Aligned_cols=103 Identities=8% Similarity=-0.083 Sum_probs=67.1
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------H---HH--------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------L---GY-------- 70 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------~---~~-------- 70 (145)
.....+.+.+.+++|.+ ..+...+.+ .+.++..++.++.|+++||+|||+.+ . ..
T Consensus 30 ~~~~~~~~~~~~~~g~s--~~~~g~~~~----~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
T TIGR00897 30 GLEQGWLSPFLKALGLS--PQQSASAFT----LYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA 103 (402)
T ss_pred hhHHHhHHHHHHHhCCC--HHHhHHHHH----HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 33445677777888884 444444433 77799999999999999999999988 0 00
Q ss_pred --------HHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHH-HHHHHHHH
Q 036778 71 --------TITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSN-SLVAYAFN 118 (145)
Q Consensus 71 --------~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~-~~~~~~~~ 118 (145)
.+..+.+.. +....+..|.+|++.|+++.|+..+...++. .+++.+..
T Consensus 104 ~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~ 163 (402)
T TIGR00897 104 NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSS 163 (402)
T ss_pred cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 1122356688899999999999888777764 34444433
No 75
>PRK11043 putative transporter; Provisional
Probab=98.57 E-value=8.6e-07 Score=67.92 Aligned_cols=100 Identities=14% Similarity=0.090 Sum_probs=68.1
Q ss_pred HHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHH
Q 036778 17 SSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTIT 73 (145)
Q Consensus 17 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~ 73 (145)
|.+.+++|. +..+..+..+ .+.+...++.++.|+++||+|||+.+ ....+.
T Consensus 30 ~~i~~~~~~--s~~~~g~~~s----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 103 (401)
T PRK11043 30 KAIQADLQT--SASAVSASLS----LFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFV 103 (401)
T ss_pred HHHHHHHCC--CHHHHHHHHH----HHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 344567888 4544444433 77888999999999999999999998 111112
Q ss_pred hhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 74 FSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 74 ~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.+.+ +....+..|.+|.+.|.+..+.......++..+++.+..++.+
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222211 2234567899999989888888877777777777777666554
No 76
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.56 E-value=4.8e-07 Score=69.17 Aligned_cols=102 Identities=13% Similarity=0.003 Sum_probs=69.3
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYT 71 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~ 71 (145)
..|.+.+++|.+ +.......+ .+.+...++.++.|+++||+|||+.+ ....
T Consensus 30 ~~~~i~~~~~~s--~~~~~~~~~----~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 103 (394)
T PRK11652 30 AIADMARDLNVR--EGAVQAVMA----AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAAS 103 (394)
T ss_pred cHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 356777888884 444444333 67788999999999999999999987 1111
Q ss_pred HHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+. .+....+..|.++.+.|++..++......++..+++.+...+.+
T Consensus 104 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 104 AIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1112211 13334567788998999999888877777777666666655543
No 77
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.56 E-value=9.8e-07 Score=67.78 Aligned_cols=109 Identities=13% Similarity=0.125 Sum_probs=74.3
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------H---------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------L--------- 68 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------~--------- 68 (145)
+...+..+.|.++++.|.+ ........ +.+.++.+++.+..+++.||++||+.. .
T Consensus 220 ~~~~~~~~lp~~l~~~g~s--~~~ag~~~----~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~ 293 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGAS--AQYSGSLL----ALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQ 293 (393)
T ss_pred HHHHHHHHHHHHHHHcCCC--hhhhhHHH----HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccch
Confidence 4455667788888887774 43333322 266688999999999999999999876 0
Q ss_pred ---HHHHHhhcccc---chhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 ---GYTITFSKGMV---RLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ---~~~~~~~~~~~---~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
......+.+.+ +.......+.+ |++.|++..++.+..+.++..+++.+..++.+
T Consensus 294 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~ 354 (393)
T PRK09705 294 LPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS 354 (393)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111111 22333445666 46789999999999999999899988888776
No 78
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.55 E-value=3.1e-07 Score=70.24 Aligned_cols=105 Identities=13% Similarity=-0.004 Sum_probs=69.1
Q ss_pred HHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH-----------H-H-------
Q 036778 12 IAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG-----------Y-T------- 71 (145)
Q Consensus 12 ~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~-----------~-~------- 71 (145)
...+.|... +++|. +..+..++. +.+.+...+++++.|+++||+|||+++.. . .
T Consensus 34 ~~~~l~~~i~~~~g~--s~~~~g~~~----~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 107 (399)
T PRK05122 34 PLAVLPGYVHDQLGF--SAFLAGLVI----SLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAW 107 (399)
T ss_pred HHHHHHHHHHHhcCc--cHHHHHHHH----HHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 334556544 55787 444444443 48889999999999999999999999800 0 0
Q ss_pred ------------HHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ------------ITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ------------~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+.+ +....+..|..|.+.|+++.++......++..+++.+..++..
T Consensus 108 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 108 PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 01111111 2334566799999999999998777666666666666665544
No 79
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.55 E-value=5e-07 Score=71.33 Aligned_cols=110 Identities=9% Similarity=-0.009 Sum_probs=77.8
Q ss_pred hchHHHHHhHHHHHhh---hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh-hCChHHH---------------
Q 036778 7 GGSTAIAYYASSIFDV---ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK-FGRRPLL--------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~grr~~~--------------- 67 (145)
.+.+.+..++|.++.+ +|. +......+.+ .+.++..++.+++|+++|| +|||+++
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~----~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFG----AYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHH----HHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 3455666677777764 566 4444444444 7778899999999999999 8999987
Q ss_pred --------HHHHHHhhccc---cchhhhhhcccCCcch---hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --------LGYTITFSKGM---VRLPNLIMFETFSINI---KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------~~~~~~~~~~~---~~~~~~~~~e~~p~~~---R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+....+.+|.+|++. |+++.++.+...++|..+++.+.+++.+
T Consensus 98 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 98 MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred hcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 01111112221 2444578889998764 8889999999999999999988887754
No 80
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.54 E-value=6.6e-08 Score=75.83 Aligned_cols=97 Identities=8% Similarity=-0.195 Sum_probs=68.4
Q ss_pred HHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------------
Q 036778 16 ASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------------- 67 (145)
Q Consensus 16 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------------- 67 (145)
.|.+.+++|.+ .....++. +.+.++..++.++.|+++||+|||+++
T Consensus 52 ~~~i~~~~~~s--~~~~g~~~----s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 52 QNDMISTYGLS--TTELGMIG----LGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred hHHHHHhcCCC--HHHHHHHH----HHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 57777888884 44444443 478899999999999999999999976
Q ss_pred HHHHHHhhc---cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSK---GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 68 ~~~~~~~~~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
....+..+. ...+....+++|.+|++.|++++|+......+|..+++.+..
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 000000111 112445578999999999999999988777777777665544
No 81
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.54 E-value=9e-07 Score=68.09 Aligned_cols=111 Identities=12% Similarity=-0.043 Sum_probs=73.3
Q ss_pred hhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH--------HH--HHH-
Q 036778 5 TLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL--------GY--TIT- 73 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~--------~~--~~~- 73 (145)
+..+......|.|.+.++.|.+ ........+ .+.++..++.+..++++||+|||+.+. +. ...
T Consensus 234 ~~~~~~~~~~~~p~~~~~~g~s--~~~~~~~~~----~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 234 NTIGLFGFAVFLPMFVAELGFS--TSEWLQIWG----TFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC--hhHHHHHHH----HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3345566677889999888884 443333222 556889999999999999999887540 00 000
Q ss_pred ------------------hhcccc--chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 74 ------------------FSKGMV--RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 74 ------------------~~~~~~--~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.+.+ ........|..| +.|+++.|+.+....+++.+++.+...+.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 375 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIG 375 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000 011234567655 589999999999999999999988877764
No 82
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.53 E-value=7.6e-07 Score=70.11 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=78.3
Q ss_pred HHhHHHHHhhhCCCCCcch-hhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 13 AYYASSIFDVASNKLSTKF-GNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
.+-.|.+.+++|++ ..+ ...+ ...+.....+..+++|+++||+|-|+++ .
T Consensus 46 s~a~p~L~~elglT--~~qv~G~I----~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 46 SFITPYLLTVLNFT--EETVTNEI----IPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred HHHHHHHHHHcCCC--HHHhcchH----HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777888985 333 3333 3488899999999999999999999998 1
Q ss_pred HHHHHhhcccc--chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 GYTITFSKGMV--RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ~~~~~~~~~~~--~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..++++.+-+ .....++...+|++.|+++.++......+|.++++.+.+++..
T Consensus 120 i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s 175 (511)
T TIGR00806 120 LMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT 175 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222222211 2455788999999999999999999999999999999988555
No 83
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.53 E-value=4.2e-07 Score=71.39 Aligned_cols=104 Identities=8% Similarity=0.012 Sum_probs=73.6
Q ss_pred HHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 13 AYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 13 ~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
..+.|.+++ +.|.+ ......+. +...++.+++.++.+++.||+|||+.+ .
T Consensus 295 ~~~lp~~l~~~~g~~--~~~~g~~~----~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (496)
T PRK03893 295 QALLPTYLKTDLGYD--PHTVANVL----FFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWV 368 (496)
T ss_pred HHHHHHHHHhhcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 346788885 57874 44333333 366788999999999999999999987 0
Q ss_pred H--HHH---HhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 G--YTI---TFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ~--~~~---~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
. ..+ ..+.+..+....+..|.+|.+.|++++++.+....++..+++.+.+++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 369 LGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 0 000 01112223444678899999999999999999888988888888777655
No 84
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.52 E-value=8e-07 Score=68.38 Aligned_cols=108 Identities=17% Similarity=0.013 Sum_probs=79.1
Q ss_pred HHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 12 IAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 12 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
..-.+|.+-+++++ +......+++ .|.++..++.++...+.||+.||+++ .
T Consensus 32 ~~gLLp~iA~dl~v--s~~~aG~lis----~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll 105 (394)
T COG2814 32 PVGLLPPIAADLGV--SEGAAGQLIT----AYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLL 105 (394)
T ss_pred HHhchHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34467888889999 4544444444 88899999999999999999999998 1
Q ss_pred HHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh---ccC
Q 036778 69 GYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE---WST 125 (145)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 125 (145)
..++..+ ....++...+..++.|+++|++++++......+...++.-+..++-+ |+.
T Consensus 106 ~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 106 LARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 1111111 11225566888999999999999999998887777777666666655 554
No 85
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.52 E-value=4.2e-07 Score=68.52 Aligned_cols=109 Identities=15% Similarity=0.176 Sum_probs=69.5
Q ss_pred chHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------H--HH----
Q 036778 8 GSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------G--YT---- 71 (145)
Q Consensus 8 g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~--~~---- 71 (145)
.......+.|.+.+ +.|.+ ........ +...+...++.++.+++.||+|||+.+. . ..
T Consensus 234 ~~~~~~~~~~~~~~~~~g~~--~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 234 TFYLITTYLPTYLTQTLGLS--ANSALLVL----MLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCC--hhHHHHHH----HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445567788874 46774 43333222 2556788889999999999999999760 0 00
Q ss_pred ------------HHhhc---cccchhhhhhcccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 036778 72 ------------ITFSK---GMVRLPNLIMFETFSINIKGSAGSLVTFL-HNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ------------~~~~~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 122 (145)
...+. ...+....+.+|.+|++.|+++.++.... ..++..+++.+.+++.+
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 00000 11133456788999999999999986543 45666677777776654
No 86
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.50 E-value=5.2e-07 Score=69.04 Aligned_cols=109 Identities=10% Similarity=0.055 Sum_probs=70.0
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCCh---HHH------------
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRR---PLL------------ 67 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr---~~~------------ 67 (145)
+......+.+..|.|+++++.|.+ .. ...... +....+.+..+++.||..|| +..
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~~g~s--~~-~~~~~~-------l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRPAGLE--DI-AGDAVA-------LAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC--hH-HHHHHH-------HHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 344556677788999999887774 22 222222 33344555567888887654 222
Q ss_pred ------------HHHHHHhhc---cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 ------------LGYTITFSK---GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ------------~~~~~~~~~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.......+. ...+..+.+.+|.+|++.|+++.|+.+..+++++.+++...+.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 272 LALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 000000000 011335578999999999999999999999999988888877654
No 87
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.49 E-value=3.5e-07 Score=71.12 Aligned_cols=107 Identities=17% Similarity=0.146 Sum_probs=71.0
Q ss_pred HHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh--CC-hHHH------------------
Q 036778 10 TAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF--GR-RPLL------------------ 67 (145)
Q Consensus 10 ~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--gr-r~~~------------------ 67 (145)
..+..+.|.+++ +.|.+ ........ +.+.++..++.++.+++.||+ ++ |...
T Consensus 260 ~~~~~~~p~~l~~~~g~s--~~~a~~~~----~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK11663 260 AAINDWGNLYMSETLGVD--LVTANSAV----SMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP 333 (434)
T ss_pred HHHHHHHHHHHHhccCCC--HHHHHHHH----HHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc
Confidence 344556787875 46774 44333332 256688999999999999998 33 3321
Q ss_pred -----HHHHHHhhcc---ccc--hhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFSKG---MVR--LPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~~~---~~~--~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
......+..+ .++ ....+.+|.+|++.|+++.|+.+..+.++..+++...+++.+
T Consensus 334 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 334 FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 0000001111 111 223456899999999999999999999999999999888876
No 88
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.48 E-value=6.2e-07 Score=76.98 Aligned_cols=86 Identities=17% Similarity=0.145 Sum_probs=63.6
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhhc---cccchhhhhhc
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFSK---GMVRLPNLIMF 87 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~~---~~~~~~~~~~~ 87 (145)
+++.+++.+...++++++|+++||+|||+++ ++..+..+. ...+....+++
T Consensus 50 ~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 129 (1146)
T PRK08633 50 AIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIP 129 (1146)
T ss_pred HHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhH
Confidence 3455588888999999999999999999987 001111111 11244557899
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 88 ETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 88 e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
|++|.+.|++++++......+|..+++.+..++..
T Consensus 130 ~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 130 ELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888887777766543
No 89
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.47 E-value=8e-07 Score=67.02 Aligned_cols=106 Identities=9% Similarity=-0.085 Sum_probs=64.6
Q ss_pred HHHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 11 AIAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
......|.++ +++|. +..+..++.+ .+.+...+..++.|.++||+||||.+
T Consensus 15 ~~~~~l~~~l~~~~g~--s~~~~g~~~~----~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (375)
T TIGR00899 15 LQFPTLSLFLSEEVRA--RPAMIGLFYT----GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYF 88 (375)
T ss_pred HHhhHHHHHHHcccCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHH
Confidence 3334455544 56888 4444444433 67788888899999999999988864
Q ss_pred --HHHHHHhhc---cccchhhhhhcccCCcchhhhH--HHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSK---GMVRLPNLIMFETFSINIKGSA--GSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~---~~~~~~~~~~~e~~p~~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+. ...+....+..|..|++.|.++ .+.......++..+++.+..++.+
T Consensus 89 ~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 150 (375)
T TIGR00899 89 LLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150 (375)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence 111111111 1123344566787787777654 456555666777777776666654
No 90
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.44 E-value=2.2e-06 Score=66.50 Aligned_cols=102 Identities=4% Similarity=-0.121 Sum_probs=72.0
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HH------------
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LG------------ 69 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~------------ 69 (145)
....|.+.+++|.+ ..+..++. +.+.++..++++..+++.||+|||+.+ ..
T Consensus 23 ~~l~~~~~~~~~~s--~~~~g~l~----s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~ 96 (410)
T TIGR00885 23 NPMVPQFQQAFTLT--AFQAALVQ----SAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTL 96 (410)
T ss_pred HHHHHHHHHHhCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 35567777778884 44444333 478899999999999999999999988 00
Q ss_pred ---HHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 70 ---YTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 70 ---~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
..+..+.+.+ +....+..|+.|++.|++..++.+....+|..+++.+.+.+
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111111 22235777888999999999999999999988888777655
No 91
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.43 E-value=1.2e-06 Score=66.12 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=71.5
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|.+ ..+..++.+ .+.++..++.++.++++||+|||+.+
T Consensus 17 ~~~~~~lp~l~~~~~~s--~~~~g~~~s----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l 90 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMS--FSVAGLLTA----LPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALL 90 (355)
T ss_pred ccCcccHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34455788889999994 544444444 78899999999999999999999998
Q ss_pred HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+. .+....+..|.+| +.|++..++......++..+++.+.+.+.
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLA 146 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111111 1233356678886 57999999988877777777666655443
No 92
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.43 E-value=7.4e-07 Score=66.77 Aligned_cols=102 Identities=14% Similarity=0.017 Sum_probs=67.4
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
....+.|.+.+++|.+ .....++.+ ++.++..++.++.|+++||+|||+.+
T Consensus 21 ~~~~~~~~~~~~~~~s--~~~~g~~~s----~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVG--VTAVAIWFT----LLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAAL 94 (377)
T ss_pred hhhhHHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3455778888889984 544444443 78899999999999999999999987
Q ss_pred HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNF 119 (145)
Q Consensus 68 ~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 119 (145)
.......+.+.+ +....+..|.+| +.|++..++......++..+.+.....
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITS 148 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHH
Confidence 111111122211 223345667777 569999999887776766554444433
No 93
>PRK09952 shikimate transporter; Provisional
Probab=98.40 E-value=4.1e-06 Score=65.33 Aligned_cols=76 Identities=17% Similarity=0.004 Sum_probs=53.8
Q ss_pred hhhhhhhHHHHHHHHHhhhCChHHH-------------------H------------HHHHHhhcccc---chhhhhhcc
Q 036778 43 QSLFQVPVVGSSVLLADKFGRRPLL-------------------L------------GYTITFSKGMV---RLPNLIMFE 88 (145)
Q Consensus 43 ~~~~~~~~~~~~~~l~Dr~grr~~~-------------------~------------~~~~~~~~~~~---~~~~~~~~e 88 (145)
..++..++.++.|+++||+|||+.+ . ..++..+.+.+ +....+++|
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 3456778889999999999999998 0 01112233322 344578999
Q ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 89 TFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 89 ~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.+|++.|++..+.......+|..++..+..
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~ 182 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVS 182 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888777777766654443
No 94
>PRK10133 L-fucose transporter; Provisional
Probab=98.37 E-value=4.1e-06 Score=65.47 Aligned_cols=104 Identities=6% Similarity=-0.143 Sum_probs=70.3
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HH--------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LG-------- 69 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~-------- 69 (145)
......+.|.+-++++.+ .....+... .+.++..++++..+.++||+|||+++ ..
T Consensus 42 ~~~~~~~~p~i~~~~~~s--~~~~gl~~~----~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~ 115 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLT--NFQAGLIQS----AFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM 115 (438)
T ss_pred HHHHHHHHHHHHHHhCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 355666788887779984 444444433 77899999999999999999999998 00
Q ss_pred -------HHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 70 -------YTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 70 -------~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.++..+.+.+ +....++.|..|.+.|...+++.+....+|..+++.+..
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111111111 223456677777777777788888887888777776543
No 95
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.36 E-value=2.4e-06 Score=64.08 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=70.8
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhC-ChH-HH-------------------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFG-RRP-LL------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~g-rr~-~~------------------- 67 (145)
.....+.|.++++ .|.+ ........ +...+...++.++.+++.||.. ||+ ..
T Consensus 233 ~~~~~~~~~~~~~~~g~~--~~~~~~~~----~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFS--KEKASWAF----TLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP 306 (379)
T ss_pred HHHHHHHHHHHHHHhCCC--HHHHHHHH----HHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc
Confidence 3445566777654 6773 43333332 2566888999999999999863 332 22
Q ss_pred -------HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -------LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -------~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+ .+..+..+.+..|.+|++.|+++.++.+....++..+++.+.+++.+
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 307 AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 00001111 11112334678899999999999999999999999999998888765
No 96
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.36 E-value=2.5e-06 Score=66.74 Aligned_cols=92 Identities=16% Similarity=-0.015 Sum_probs=60.6
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHH-----------
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGY----------- 70 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~----------- 70 (145)
.+..|.+.++ |. +.....+.. +...++..+++++.|+++||+|||+++ ...
T Consensus 49 ~~~~p~l~~~-g~--s~~~~g~~~----~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 121 (452)
T PRK11273 49 ALAMPYLVEQ-GF--SRGDLGFAL----SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIA 121 (452)
T ss_pred HHhhHHHHHc-CC--CHHHHHHHH----HHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHH
Confidence 3456666666 77 344444333 377788999999999999999999988 000
Q ss_pred -----HHHhh--cc-ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHH
Q 036778 71 -----TITFS--KG-MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNS 111 (145)
Q Consensus 71 -----~~~~~--~~-~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~ 111 (145)
.+..+ .+ ..+.......|.+|++.|++++++.+....+++.
T Consensus 122 ~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 122 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 00001 11 1122335677899999999999998777776653
No 97
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.35 E-value=4e-06 Score=66.06 Aligned_cols=94 Identities=15% Similarity=0.009 Sum_probs=64.4
Q ss_pred hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------H--H---------------HHHH
Q 036778 22 VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------L--G---------------YTIT 73 (145)
Q Consensus 22 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~--~---------------~~~~ 73 (145)
++++ +..+..++.+ ++.+...+..+..|+++||+|.|+++ . . ..+.
T Consensus 64 ~~~l--s~~q~g~l~a----i~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l 137 (462)
T PRK15034 64 GFNF--TTDQLFLLTA----LPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALL 137 (462)
T ss_pred hcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHH
Confidence 4677 4444444433 77788888888889999999999887 0 0 0111
Q ss_pred hhc--cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 74 FSK--GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 74 ~~~--~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.+. +..+.....+++.||++.|+++.|+....+++|..+.+.+.|.+.
T Consensus 138 ~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i 187 (462)
T PRK15034 138 CGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI 187 (462)
T ss_pred HHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 111 111334567889999999999999998777888777766666533
No 98
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.34 E-value=1.6e-06 Score=68.04 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=70.4
Q ss_pred HHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------HH
Q 036778 12 IAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------LG 69 (145)
Q Consensus 12 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------~~ 69 (145)
...+.|.+.+++|.+ .....++.+ .+.+...++.++.|+++||+|||+++ ..
T Consensus 38 ~~~~~~~i~~~~g~s--~~~~~~~~s----~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~ 111 (455)
T TIGR00892 38 VTVFFKELQQIFQAT--YSETAWISS----IMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELY 111 (455)
T ss_pred hhhhHHHHHHHhCcc--hhHHHHHHH----HHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHH
Confidence 345677788888885 333333333 55566777889999999999999998 11
Q ss_pred --HHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 --YTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 --~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+..+.+.+ +....++.+.+| +.|+++.++......++..+++.+.+.+..
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 1112222222 333456678886 789999999998888888887777766554
No 99
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.34 E-value=3.9e-06 Score=64.19 Aligned_cols=104 Identities=10% Similarity=0.002 Sum_probs=67.2
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
....+.|.+.++.|.+ ..... .+.+.++..++.+..+++.||+|||+.+
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (399)
T PRK05122 234 TIATFITLYYAARGWD-GAALA-------LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMA 305 (399)
T ss_pred HHHHHHHHHHHHcccc-cchHH-------HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3444566666665553 22111 1244577888899999999999999877
Q ss_pred HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+.+ +.......|..|++.|+++.++.+....++..+++.+..++.+
T Consensus 306 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 363 (399)
T PRK05122 306 LIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS 363 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111111111 2223456688999999999999998888888777777776654
No 100
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.34 E-value=1.7e-06 Score=66.76 Aligned_cols=107 Identities=10% Similarity=-0.030 Sum_probs=72.6
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----H---H-H--H--------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----L---G-Y--T-------- 71 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----~---~-~--~-------- 71 (145)
.......|.+.++.+. ++.+..++. +.+.+...+++++.|+++||+|||+++ . . + .
T Consensus 34 ~~~~~~~~~~~~~~~~--s~~~~g~~~----~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 107 (417)
T PRK10489 34 GLLGVAVPVQIQMMTG--STLQVGLSV----TLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPE 107 (417)
T ss_pred HHHHHHHHHHHHHHHC--CHHHHHHHH----HHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCC
Confidence 4445567777788777 444444433 377789999999999999999999977 0 0 0 0
Q ss_pred ----------HHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ----------ITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ----------~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+. .+....+..|..|++.|+++.++......++..+++.+...+..
T Consensus 108 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 108 PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 0000000 12223567799999999999999888888888777777666543
No 101
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.33 E-value=8.5e-06 Score=61.38 Aligned_cols=113 Identities=12% Similarity=-0.053 Sum_probs=66.7
Q ss_pred hhchHHHHHhHHHHHhhhCCCCCcchhhhhee-hhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------
Q 036778 6 LGGSTAIAYYASSIFDVASNKLSTKFGNFRIS-ILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------- 67 (145)
Q Consensus 6 ~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------- 67 (145)
....+.+.+..+.+.++...+.+......+.+ ...+...+...+++++.|+++||+|||+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 85 (394)
T TIGR00883 6 WFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC
Confidence 34445566666666666433112222211111 111122334456889999999999999988
Q ss_pred --H----------HH--HHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 --L----------GY--TITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 68 --~----------~~--~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
. +. ++..+.+. .+....+++|.+|.+.|++..++......+|..+++.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 86 PSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred CChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 01111111 1334568899999999999999988877777777665543
No 102
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.33 E-value=1.2e-07 Score=73.74 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=58.4
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhcccc---chhhhhhcccCCcc
Q 036778 40 RHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKGMV---RLPNLIMFETFSIN 93 (145)
Q Consensus 40 ~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~~~---~~~~~~~~e~~p~~ 93 (145)
...+.+.+++.++++|++.||++||+++ .+.+.+.+.|.. ++...+++|+||..
T Consensus 74 ~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~ 153 (493)
T KOG1330|consen 74 QTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD 153 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcch
Confidence 3377799999999999999999999998 233333343333 67778999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q 036778 94 IKGSAGSLVTFLHNNSNSLV 113 (145)
Q Consensus 94 ~R~~~~~~~~~~~~~~~~~~ 113 (145)
.|++.+++-+....+|..++
T Consensus 154 ~Rs~~~~ify~~ipvGsglG 173 (493)
T KOG1330|consen 154 KRSRVLGIFYFAIPVGSGLG 173 (493)
T ss_pred hhhHHHHHhhhhccccccee
Confidence 99999999998777765443
No 103
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.33 E-value=2.2e-06 Score=68.16 Aligned_cols=84 Identities=23% Similarity=0.202 Sum_probs=61.8
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhcccc---chhhhhhcccC
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKGMV---RLPNLIMFETF 90 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~~~---~~~~~~~~e~~ 90 (145)
+++++...++..+++++.+.++|++|||+.+ ...++..+.+.+ .+...|++|+-
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC
Confidence 3555688899999999999999999999988 222223333333 34568999999
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 91 SINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 91 p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
|++.|+.-.++......+|..++ ++..+..
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 99999999999887777555444 4444444
No 104
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.33 E-value=1.8e-06 Score=67.18 Aligned_cols=97 Identities=14% Similarity=-0.053 Sum_probs=64.6
Q ss_pred HHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHH--------------
Q 036778 16 ASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGY-------------- 70 (145)
Q Consensus 16 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~-------------- 70 (145)
.|.+. +.|. +..+..+..+ ++.++..++.++.|+++||+|||+.+ ...
T Consensus 50 ~p~~~-~~g~--s~~~~g~~~~----~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 122 (438)
T TIGR00712 50 MPYLV-EQGF--SKGELGFALS----AISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMF 122 (438)
T ss_pred hHHHH-HcCC--CHhHhHHHHH----HHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHH
Confidence 45444 3576 4444444433 77799999999999999999999977 000
Q ss_pred --HHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 036778 71 --TITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNF 119 (145)
Q Consensus 71 --~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 119 (145)
.+..+.+. .+.....+.|.+|++.|++++++.+....+++.+.+.+...
T Consensus 123 ~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHH
Confidence 00001111 12234577789999999999999988888877777655443
No 105
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.32 E-value=8.9e-07 Score=67.64 Aligned_cols=86 Identities=19% Similarity=0.183 Sum_probs=63.7
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------H-HH---HHHhhc--cccchhhhhhcccCC
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------L-GY---TITFSK--GMVRLPNLIMFETFS 91 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------~-~~---~~~~~~--~~~~~~~~~~~e~~p 91 (145)
+++-+.+.+.+++.++..|.++||.|||.++ + .+ ++..+. +--.+.-++++|+.+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~s 150 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVS 150 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcC
Confidence 4455588999999999999999999999998 1 00 111111 111445689999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 92 INIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 92 ~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.|+.+++.......+|..++|.+..++..
T Consensus 151 ek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 151 EKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999888777777777766655543
No 106
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.30 E-value=7e-06 Score=64.18 Aligned_cols=108 Identities=14% Similarity=0.063 Sum_probs=73.2
Q ss_pred hHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------HH--------
Q 036778 9 STAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------GY-------- 70 (145)
Q Consensus 9 ~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~~-------- 70 (145)
.+...++.|.++++ .|. ++....... +...++..++.++.+++.||+|||+.+. ..
T Consensus 271 ~~~~~~~~p~~~~~~~g~--s~~~~g~~~----~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (485)
T TIGR00711 271 LYGSFYLLPLYLQQVLGY--TALQAGLHI----LPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP 344 (485)
T ss_pred HHHHHHHHHHHHHHhcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC
Confidence 34455677888876 677 444333332 2566888999999999999999999870 00
Q ss_pred ----------HHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 71 ----------TITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 71 ----------~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+.+.+ +.......|..|++.|+++.++.+....+++.+++.+...+.+
T Consensus 345 ~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 345 DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111111 1122445677899999999999999999999998888776654
No 107
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.30 E-value=7.8e-06 Score=61.04 Aligned_cols=103 Identities=11% Similarity=-0.014 Sum_probs=73.3
Q ss_pred HhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH-----------------------
Q 036778 14 YYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG----------------------- 69 (145)
Q Consensus 14 ~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~----------------------- 69 (145)
.+.|.+.++ .|.+ ........ +...++.+++.+..+++.||.+||+.+..
T Consensus 232 ~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRG--STHYGWVL----AAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCc--hHHHHHHH----HHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777776 6773 44333332 35668888999999999999999988700
Q ss_pred -HHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 -YTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 -~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+. .+....+..|..|++.|++..++.+....++..+++.+.+++.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 13445688899999999999999999999999999988887764
No 108
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.28 E-value=8.5e-06 Score=62.54 Aligned_cols=102 Identities=14% Similarity=0.089 Sum_probs=65.7
Q ss_pred HhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH--------HHH-------------
Q 036778 14 YYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL--------GYT------------- 71 (145)
Q Consensus 14 ~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~--------~~~------------- 71 (145)
.+.|.+.++ .|.+ ........+ ...++.+++.++.+++.||+|||+.+. .+.
T Consensus 237 ~~~p~~l~~~~~~~--~~~~g~~~~----~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (393)
T PRK15011 237 INMPLFIINELHLP--EKLAGVMMG----TAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 456766654 6774 443333322 344666778899999999999998770 000
Q ss_pred --HHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 --ITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 --~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
...+.. ..+....+..|.+|.+ |+++.++.+....+|..+++.+.+.+.+
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~ 365 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAE 365 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0122335678999864 9999999888888888888888877765
No 109
>PRK03699 putative transporter; Provisional
Probab=98.25 E-value=9.1e-06 Score=62.35 Aligned_cols=108 Identities=6% Similarity=-0.113 Sum_probs=71.1
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
+...+..|.|.+.++ .|. +........+ .++++..++.+..+++.||++||+.+
T Consensus 220 ~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~----~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGM--SLEDAGNLVS----NFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDD 293 (394)
T ss_pred HHHHHHHHHHHHHHHHcCC--ChHHhhHHHH----HHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCC
Confidence 334556788888865 687 4444443333 66788999999999999999999987
Q ss_pred ----HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.. ..+....+..|..|. .+++..+.....+.+|..+++.+.+++.+
T Consensus 294 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 294 PSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 0000111111 112233455666654 35677888888888999999998888865
No 110
>PRK12382 putative transporter; Provisional
Probab=98.24 E-value=7.3e-06 Score=62.62 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=71.1
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+...+..+.|.++++.+.+ .... . ...+.++.+++.+..+++.||+|||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~---~----~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA-MAGF---T----LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA 302 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc-hhHH---H----HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccH
Confidence 3344555667777766653 2111 1 1234467788889999999999998877
Q ss_pred ---HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+.......|.+|++.|++..++.+....++..+++.+.+++.+
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 363 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT 363 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111111 12333566788999999999999999999999999988887764
No 111
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.24 E-value=1.5e-05 Score=60.84 Aligned_cols=106 Identities=10% Similarity=-0.049 Sum_probs=70.6
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------HH----------H
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------LG----------Y 70 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------~~----------~ 70 (145)
....+.|.+.++.|. ++...... .+...++..++....+++.||+|||+.+ .. .
T Consensus 218 ~~~~~lp~~~~~~g~--s~~~~g~~----~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 291 (381)
T PRK03633 218 SLYGLMPLYLNHQGM--SDASIGFW----MALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQAAMAPA 291 (381)
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHH----HHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 344567888887777 34333332 2366688889999999999999999987 00 0
Q ss_pred HHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 71 TITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 71 ~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+ ....|.......|..|++.++...+.......+|..+++.+..++.+
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001 11124445567788888877777777777778888888888887754
No 112
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.22 E-value=8.2e-06 Score=61.49 Aligned_cols=103 Identities=15% Similarity=-0.038 Sum_probs=65.3
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-----CChHHH------------------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-----GRRPLL------------------ 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----grr~~~------------------ 67 (145)
.+++-.|.+.++.|.+ ..+...... . .+... ..++.|.++||+ ||||.+
T Consensus 6 ~~~~~~~~~~~~~g~s--~~~~g~~~~----~-~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~ 77 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVS--LKTIGFFSL----V-GLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL 77 (356)
T ss_pred hHHhHHHHHHHHcCCC--HHHHHHHHH----H-HHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 3445678889999995 443333321 1 12223 278999999998 888864
Q ss_pred -------HHHHH--H---hhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 -------LGYTI--T---FSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 -------~~~~~--~---~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.+... . ......+...++++|.+|++.|+++.++......+|..+++.+...+.
T Consensus 78 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 78 VPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000 0 000111333467899999999999999988888888877777765443
No 113
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.22 E-value=1.5e-05 Score=63.47 Aligned_cols=109 Identities=13% Similarity=0.044 Sum_probs=67.8
Q ss_pred chHHHHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh-hCChHHH------------------
Q 036778 8 GSTAIAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK-FGRRPLL------------------ 67 (145)
Q Consensus 8 g~~~~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~grr~~~------------------ 67 (145)
+.+.+..+.+.++ +++|.+ ........+ .+........+++|+++|| +|||+.+
T Consensus 36 ~~y~~~~~l~~yl~~~lg~s--~~~a~~~~~----~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~ 109 (500)
T PRK09584 36 GYYGLQGIMAVYLVKQLGMS--EADSITLFS----SFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG 109 (500)
T ss_pred HHHHHHHHHHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455555666666 558884 333332222 2333334445688999999 5999988
Q ss_pred ------HHHHHHhhccc---cchhhhhhcccCCcch--hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ------LGYTITFSKGM---VRLPNLIMFETFSINI--KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ------~~~~~~~~~~~---~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+. .+....+.+|.+|.+. |..+.++.++..++|..+++.+.+++.+
T Consensus 110 ~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~ 175 (500)
T PRK09584 110 HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA 175 (500)
T ss_pred ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011112221 2344568899998653 4567888888899999999988888865
No 114
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.20 E-value=3.7e-06 Score=65.42 Aligned_cols=109 Identities=7% Similarity=-0.001 Sum_probs=68.7
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChH--HH--------HHH------
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRP--LL--------LGY------ 70 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~--~~--------~~~------ 70 (145)
+.+.+..|.|.++++ .|.+ +....+.. +.+.+..+++.+.++++.||+++++ .. ...
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s--~~~~~~~~----~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFA--LDKSSWAY----FLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWM 339 (438)
T ss_pred HHHHHHHhHHHHHHHccCCC--hhhHHHHH----HHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHh
Confidence 335566788888886 5763 43332222 2555888999999999999996433 22 000
Q ss_pred ------------HHHhhcc-ccchh--hhhhcccCCcchhhhHHHHHHHHHHHHH-HHHHHHHHHHhh
Q 036778 71 ------------TITFSKG-MVRLP--NLIMFETFSINIKGSAGSLVTFLHNNSN-SLVAYAFNFMIE 122 (145)
Q Consensus 71 ------------~~~~~~~-~~~~~--~~~~~e~~p~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 122 (145)
.+..+.+ .++.. .....|.+|++.|+++.|+.+....+++ ++++.+.+.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~ 407 (438)
T TIGR00712 340 NPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 407 (438)
T ss_pred cCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH
Confidence 0001111 11111 2346799999999999999988887765 567888777765
No 115
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.20 E-value=8.6e-07 Score=68.39 Aligned_cols=98 Identities=14% Similarity=0.012 Sum_probs=70.9
Q ss_pred HHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------------HH
Q 036778 17 SSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------------LG 69 (145)
Q Consensus 17 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------------~~ 69 (145)
|.+.++.+.+ -.+..+ +.+++.+...++-+..|.++||.+.|+.+ .+
T Consensus 53 p~l~e~~~ls--k~~lG~----i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~l 126 (448)
T COG2271 53 PALIEDGGLS--KTQLGI----LGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVL 126 (448)
T ss_pred HHHHHhcCCC--HHHHHH----HHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4444555553 333333 33488899999999999999999999877 11
Q ss_pred HHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHH--HHHh
Q 036778 70 YTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAF--NFMI 121 (145)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~ 121 (145)
-..+.++|+ |.+...++..+|++.|++..++.+..+++|+.+.+.+. .++.
T Consensus 127 ng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 127 NGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 111223443 44457888999999999999999999999999988887 5554
No 116
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.19 E-value=1.1e-05 Score=69.66 Aligned_cols=86 Identities=13% Similarity=-0.030 Sum_probs=66.7
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhh---ccccchhhhhhc
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFS---KGMVRLPNLIMF 87 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~---~~~~~~~~~~~~ 87 (145)
++..+++.+...+.+++.|+++||+|||+++ ++..+..+ ....+...+++.
T Consensus 55 ~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~ 134 (1140)
T PRK06814 55 TLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILP 134 (1140)
T ss_pred HHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhH
Confidence 3445578888899999999999999999964 11111112 122366678999
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 88 ETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 88 e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
|++|.+.|++++|+..+...++..+++.+.+++..
T Consensus 135 ~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~ 169 (1140)
T PRK06814 135 DHLNKDELLGANALVEAGTFIAILLGTIIGGLATI 169 (1140)
T ss_pred hhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998888887765
No 117
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=4.8e-08 Score=75.84 Aligned_cols=81 Identities=20% Similarity=0.163 Sum_probs=58.4
Q ss_pred eehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhhccc---cchhhhhh
Q 036778 36 ISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFSKGM---VRLPNLIM 86 (145)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~~~~---~~~~~~~~ 86 (145)
.+++++...++..+|++++|++.||+|||+.+ ...++..+.+. .+....|+
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~ 127 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYI 127 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34556688899999999999999999999988 01111112222 24566899
Q ss_pred cccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 87 FETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 87 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
.|..|++.|++..++......+|..++..+
T Consensus 128 ~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~ 157 (451)
T PF00083_consen 128 SEIAPPKHRGFLSSLFQLFWALGILLASLI 157 (451)
T ss_pred cccccccccccccccccccccccccccccc
Confidence 999999999999988887666665554433
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.15 E-value=2.3e-05 Score=60.88 Aligned_cols=84 Identities=13% Similarity=0.216 Sum_probs=59.0
Q ss_pred hhhhhhhhhhhHHHHHHHHHhhhCChHHH--------HH---HHH----------------Hhhcc---ccchhhhhhcc
Q 036778 39 LRHIQSLFQVPVVGSSVLLADKFGRRPLL--------LG---YTI----------------TFSKG---MVRLPNLIMFE 88 (145)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------~~---~~~----------------~~~~~---~~~~~~~~~~e 88 (145)
+.+...+...++.+..+++.||+|||+++ .. +.. ..+.+ ..+....+++|
T Consensus 256 ~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~ 335 (418)
T TIGR00889 256 WMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEK 335 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33466678888899999999999999998 00 000 01111 11233467899
Q ss_pred cCCcchhhhHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 036778 89 TFSINIKGSAGSLVT-FLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 89 ~~p~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 122 (145)
.+|++.|+++.++.+ ....++..+++.+.+++.+
T Consensus 336 ~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~ 370 (418)
T TIGR00889 336 EVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVE 370 (418)
T ss_pred HCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999997 5567788888888776654
No 119
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.13 E-value=8.5e-06 Score=62.80 Aligned_cols=96 Identities=14% Similarity=0.019 Sum_probs=71.8
Q ss_pred HhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHH
Q 036778 20 FDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTIT 73 (145)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~ 73 (145)
-+++++ ++.+..++.+ ++.+...+.-++-+.+.||+|-|++. +.....
T Consensus 41 ~~~~~L--S~~q~~ll~a----iPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll 114 (417)
T COG2223 41 KSDFGL--SEGQKGLLVA----IPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLL 114 (417)
T ss_pred ccccCC--CHHHHHHHHH----HHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence 355666 4555554444 88899999999999999999998887 111111
Q ss_pred h--hccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 74 F--SKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 74 ~--~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
. +.+...+...++++.||++.++.+.|+.- .+|+|..+...+.|.+..
T Consensus 115 ~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~ 164 (417)
T COG2223 115 LGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV 164 (417)
T ss_pred HhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH
Confidence 1 12222455578999999999999999999 999999999999988765
No 120
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.12 E-value=2.7e-05 Score=58.73 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=65.3
Q ss_pred HhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HH
Q 036778 14 YYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LG 69 (145)
Q Consensus 14 ~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~ 69 (145)
.+.|.+. ++.|.+ +........ .......++.+..+++.||+|||+.+ ..
T Consensus 220 ~~~~~~~~~~~g~~--~~~~g~~~~----~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T TIGR00899 220 INMPLLIIHELGLP--DKLAGLMMG----TAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLM 293 (375)
T ss_pred hhhHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555 446774 433333222 33355667788899999999999987 00
Q ss_pred HHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 YTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+ ..+....+..|..|.+ |+++.++.+....++..+++.+.+.+.+
T Consensus 294 ~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~ 348 (375)
T TIGR00899 294 LQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAE 348 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111 1234456778888865 5699999998888999999988887754
No 121
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=1.1e-05 Score=48.29 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=48.3
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL 68 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~ 68 (145)
+..+++...+..|.|.+.++.|+ ++.+..++.+ +..+..+++.+++|+++||.+|++...
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~----i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSA----IRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 34556667778899999999999 5655554444 888999999999999999999999773
No 122
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.10 E-value=1.8e-05 Score=58.83 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=68.7
Q ss_pred chHHHHHhHHHH-HhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 8 GSTAIAYYASSI-FDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
.......+.|.+ .+..|.+ +........+ ...+...++.++.+++.||+++|+..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFS-GPSQAGLLFS----IFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCC-THHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred HHHHhhcccchhhhhccCCC-HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334466677776 4457773 1333332233 55577777899999999999987766
Q ss_pred -------HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHH
Q 036778 68 -------LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVA 114 (145)
Q Consensus 68 -------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~ 114 (145)
.......+.+ ..+....+..|..|++.|++..++......++..++|
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1111111111 1345568889999999999999999999998888765
No 123
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.09 E-value=1.6e-06 Score=67.65 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=58.2
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------------------HHHHHHhhcccc---chhh
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------------------LGYTITFSKGMV---RLPN 83 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------------------~~~~~~~~~~~~---~~~~ 83 (145)
+.++++.+++.++|+++.||+.||+|||+++ .++++..+.|.+ |...
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSA 166 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSA 166 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchH
Confidence 3456688899999999999999999999998 455566666666 7777
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHHH
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNNS 109 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~~ 109 (145)
+..+|-...+.|+.-.+...++...|
T Consensus 167 tI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 167 TIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred HHhhhhhhhccccceeEEEEEecchh
Confidence 89999999999998887766544444
No 124
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.09 E-value=2.5e-05 Score=60.12 Aligned_cols=111 Identities=10% Similarity=-0.013 Sum_probs=71.2
Q ss_pred hhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-----CChHH-H----------
Q 036778 4 QTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-----GRRPL-L---------- 67 (145)
Q Consensus 4 ~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----grr~~-~---------- 67 (145)
.|.-.......-.|.++++.|.+ ..+..++.. ... -.+..++.+.++||+ ||||. +
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~--~~~ig~~~~----~~~--~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLD--IQTIGFFSL----VGQ--AYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCC--HHHHHHHHH----HHH--HHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 34444555666789999999995 443333321 111 156779999999999 88764 3
Q ss_pred ----------------HHHHHH---hhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----------------LGYTIT---FSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----------------~~~~~~---~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+. ......+...++.+|.+|++.|+++.++......++..+++.+..++..
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 000000 0111113445788999999999999999988878888777776655544
No 125
>PRK03545 putative arabinose transporter; Provisional
Probab=98.06 E-value=6.4e-05 Score=57.51 Aligned_cols=102 Identities=12% Similarity=-0.024 Sum_probs=66.7
Q ss_pred HhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HH
Q 036778 14 YYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LG 69 (145)
Q Consensus 14 ~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~ 69 (145)
.|.+.+.++ .|.+ ......... ...++..++.++.+++.||++||+.. ..
T Consensus 226 ~~~~~~l~~~~g~s--~~~~~~~~~----~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 299 (390)
T PRK03545 226 SYIEPFVQQVAGLS--ENFATLLLL----LFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSV 299 (390)
T ss_pred HHHHHHHHHhcCCC--ccHHHHHHH----HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 344555554 6774 443333222 55578899999999999999998776 00
Q ss_pred HHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 YTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+.++.+ ..+.......|..| +.|++++++......++..+++.+.+++.+
T Consensus 300 ~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~ 354 (390)
T PRK03545 300 LSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL 354 (390)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111 11223355667766 688999999998888999999998888876
No 126
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.05 E-value=1.5e-05 Score=62.32 Aligned_cols=112 Identities=9% Similarity=-0.022 Sum_probs=70.7
Q ss_pred hhhhhchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHH---------H----H
Q 036778 3 MQTLGGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPL---------L----L 68 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~---------~----~ 68 (145)
+.+..+.+....|.|.++++ .|.+ .....+. .+.+.++..++.+++|+++||+++|+. . .
T Consensus 271 ~~~~~~~~~~~~~lp~~l~~~~g~s--~~~~g~~----~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 344 (465)
T TIGR00894 271 FGHFWLYTILPTYLPTFISWVLRVS--GKENGLL----SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGG 344 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcC--hHHhHHH----HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 34445566667788988876 6773 4433333 337778999999999999999864421 1 0
Q ss_pred ------HHHHH------------h---hcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 69 ------GYTIT------------F---SKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 69 ------~~~~~------------~---~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.+... + +.. ..+..+....|..|. .++...++.+..+.+++++.+.+.+++.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 345 LGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 00000 0 000 001122344466665 8999999999999999988888887664
No 127
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.05 E-value=3.6e-05 Score=61.06 Aligned_cols=107 Identities=10% Similarity=-0.051 Sum_probs=67.6
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-----CChHHH-------H-H-----
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-----GRRPLL-------L-G----- 69 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----grr~~~-------~-~----- 69 (145)
.........|.++++.|.+ ......... . ....++.++.+.++||+ |||+.+ . .
T Consensus 27 ~~~~~~~~l~~~l~~~g~~--~~~ig~~~~-----~-~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~ 98 (491)
T PRK11010 27 PLALTSGTLQAWMTVENID--LKTIGFFSL-----V-GQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAM 98 (491)
T ss_pred HHHHHHHHHHHHHHhCCCC--HHHHHHHHH-----H-HHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 3444555567777777774 332222211 0 11125789999999999 998853 0 0
Q ss_pred --------------HHH---HhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 --------------YTI---TFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 --------------~~~---~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
... .......+...++.+|.+|.+.|+++.++......+|..+++....++.+
T Consensus 99 a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 99 GFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 00111113345788899999999999999999888888888877666654
No 128
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.05 E-value=3e-05 Score=59.45 Aligned_cols=55 Identities=20% Similarity=0.053 Sum_probs=39.9
Q ss_pred hchHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 7 GGSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
.+......+.|.+.+ +.|. +..+..+. .+.+.++..++.++.|+++||+|||+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~g~--s~~~~g~~----~~~~~l~~~i~~~~~G~l~Dr~grr~~~ 71 (396)
T TIGR00882 16 FIMSAYFPFFPIWLHDVNGL--SKTDTGIV----FSCISLFSILFQPLFGLISDKLGLKKHL 71 (396)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 344444456666665 4788 45444433 3488899999999999999999999998
No 129
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.03 E-value=2.6e-05 Score=63.17 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=61.3
Q ss_pred HHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHH
Q 036778 17 SSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTIT 73 (145)
Q Consensus 17 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~ 73 (145)
+.+.+++|-+.+..+... .+.+...++.++.|.++|.+|||..+ ..-..+
T Consensus 68 ~~I~~diG~~~~~~w~~~-------~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l 140 (599)
T PF06609_consen 68 PYINADIGGSDNWSWFST-------AWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVL 140 (599)
T ss_pred HHHHHhcCCCccchHHHH-------HHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHH
Confidence 455566776412213222 45588888999999999999999998 111111
Q ss_pred hhccc--cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh---hccC
Q 036778 74 FSKGM--VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI---EWST 125 (145)
Q Consensus 74 ~~~~~--~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 125 (145)
++.+. .......++|+.|.+.|..+.++..........+++.+...+. .||+
T Consensus 141 ~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw 197 (599)
T PF06609_consen 141 YGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRW 197 (599)
T ss_pred HHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcch
Confidence 12222 2334456899999999988877665433333333444443333 2777
No 130
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.02 E-value=7.1e-05 Score=56.45 Aligned_cols=108 Identities=8% Similarity=0.032 Sum_probs=68.5
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhC-ChHHH--------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFG-RRPLL-------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~g-rr~~~-------------------- 67 (145)
......+.|.++++.|.+ ........ +...++.+++.++.+++.||++ ||+.+
T Consensus 213 ~~~~~~~lp~~~~~~g~~--~~~~g~~~----~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T TIGR00896 213 YYSLIGWLPAILISHGAS--AATAGSLL----ALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH 286 (355)
T ss_pred HHHHHHHHHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344456788888887773 44333333 3667889999999999999994 55544
Q ss_pred --HHHHHHhhcccc---chhhhhhcc-cCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSKGMV---RLPNLIMFE-TFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~~~~---~~~~~~~~e-~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+...++.+.+ +.......+ ..+++.++...++.+....++..+++.+..++.+
T Consensus 287 ~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 287 GLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred HHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111222222 222233333 3455677888898888888888888888877765
No 131
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.01 E-value=5e-05 Score=60.07 Aligned_cols=82 Identities=16% Similarity=0.000 Sum_probs=65.0
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCChHHH-------------------------HHHHHHhhcccc---chhhhhhcccCCc
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRRPLL-------------------------LGYTITFSKGMV---RLPNLIMFETFSI 92 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------------~~~~~~~~~~~~---~~~~~~~~e~~p~ 92 (145)
+.+..+.+++.+..++++||+|-|+++ ...++..+.+.+ |....+.+...|+
T Consensus 80 ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~ 159 (466)
T KOG2532|consen 80 SSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPP 159 (466)
T ss_pred HHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCH
Confidence 378899999999999999999999988 223333333322 4455778899999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 93 NIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 93 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+.|++..++......+|.++...+.+++.+
T Consensus 160 ~Ers~~~ail~~g~q~g~v~~mp~sg~lc~ 189 (466)
T KOG2532|consen 160 NERSTFIAILTAGSQLGTIITMPVSGLLCE 189 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 999999999998888888888878887775
No 132
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.00 E-value=6e-05 Score=59.95 Aligned_cols=94 Identities=21% Similarity=0.178 Sum_probs=66.9
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH---------------------H---------HHHHHhhccccchhhhhhcccCCcch
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL---------------------L---------GYTITFSKGMVRLPNLIMFETFSINI 94 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~---------------------~---------~~~~~~~~~~~~~~~~~~~e~~p~~~ 94 (145)
....++....+.+.||.|||... . +..++.+.+. ...+.+.+|++|+..
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~el~pt~~ 439 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAF-NLIFLYSAELIPTVV 439 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHH
Confidence 56777778888999999999988 0 0000011111 233688999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh----cc---C---------------CCCCCCCHHHHHHH
Q 036778 95 KGSAGSLVTFLHNNSNSLVAYAFNFMIE----WS---T---------------IETKGRTLEEIQRS 139 (145)
Q Consensus 95 R~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~---------------pet~~~~l~~i~~~ 139 (145)
|..+.+.+...+.+++++++.+...... +. . |||+++.++|-.+.
T Consensus 440 r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~ 506 (521)
T KOG0255|consen 440 RNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLD 506 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHH
Confidence 9999999999999999888887644432 11 0 99999987654433
No 133
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.00 E-value=6.7e-05 Score=59.47 Aligned_cols=107 Identities=9% Similarity=0.036 Sum_probs=72.7
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
....+|.|.+++. .|. ++........ .+.++..++.++.|++.||+|||+.+
T Consensus 276 ~~~~~~~~~~lq~v~g~--s~~~ag~~~~----~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~ 349 (495)
T PRK14995 276 VGFELLMAQELQFVHGL--SPLEAGMFML----PVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFST 349 (495)
T ss_pred HHHHHHHHHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3445677777776 577 4544443333 55578888999999999999999887
Q ss_pred -----HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+.+ +.......+..|.+.|+.+.++.+....+|+.+++.+...+..
T Consensus 350 ~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 350 QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111111111 1223455678899999999999999999998888887777655
No 134
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.98 E-value=3.5e-05 Score=63.07 Aligned_cols=101 Identities=7% Similarity=-0.091 Sum_probs=71.4
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHHHH-----------
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGYTI----------- 72 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~~~----------- 72 (145)
-.+.+.++++++ .....++.+ .+.++..++.++.+++.||.|||+++ +++..
T Consensus 55 ~l~~iek~F~ls--s~~~G~i~s----~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 55 SLTTIERRFKLS--TSSSGLING----SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred hchhhhhhhCCC--CCcceeeee----hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 345566678884 444444444 88899999999999999999999987 11100
Q ss_pred ----------------------------------------------------Hhhcccc---chhhhhhcccCCcchhhh
Q 036778 73 ----------------------------------------------------TFSKGMV---RLPNLIMFETFSINIKGS 97 (145)
Q Consensus 73 ----------------------------------------------------~~~~~~~---~~~~~~~~e~~p~~~R~~ 97 (145)
..+.+.+ +....|+.|.+|++.|++
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0011111 344578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 98 AGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.+++......+|..+++.+..++.
T Consensus 209 ~~~i~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 209 YIGILESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999888888777766655443
No 135
>PRK10504 putative transporter; Provisional
Probab=97.97 E-value=7.3e-05 Score=58.52 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=68.7
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH--------------------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-------------------- 68 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-------------------- 68 (145)
....++.|.+++. .|. ++....+.. ....++..++.++.+++.||+|||+++.
T Consensus 278 ~~~~~~~~~~~~~~~g~--~~~~~g~~~----~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (471)
T PRK10504 278 GMLPFMTPVFLQIGLGF--SPFHAGLMM----IPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG 351 (471)
T ss_pred HHHHHHHHHHHHHHcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc
Confidence 3445567888875 676 444333322 2444666777788999999999999870
Q ss_pred ----HH--HHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 69 ----GY--TITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ----~~--~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.. ....+.+. .+....+..+..|.+.|+++.++.+....++..+++.+...+..
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00001110 12233556688999999999999998888888777777665544
No 136
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.97 E-value=4.8e-05 Score=58.81 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=39.6
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
.....+.|.++++ .|. +..+..++.+ ++.+...++.++.|+++||+|||+.+
T Consensus 27 ~~~~~~~~~~l~~~~g~--s~~~~g~~~s----~~~l~~~i~~~~~G~l~Dr~g~r~~~ 79 (420)
T PRK09528 27 SSWFSFFPIWLHDINGL--SGTDTGIIFS----ANSLFALLFQPLYGLISDKLGLKKHL 79 (420)
T ss_pred HHHHHHHHHHHHHhcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 3445566666665 888 4555444444 88899999999999999999999987
No 137
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.97 E-value=3e-05 Score=61.19 Aligned_cols=100 Identities=16% Similarity=-0.046 Sum_probs=61.2
Q ss_pred HHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChH-----H-H-----H-----------
Q 036778 12 IAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRP-----L-L-----L----------- 68 (145)
Q Consensus 12 ~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~-----~-~-----~----------- 68 (145)
...+.|.++.+ .|.+ ....... .+++.++..++.+++|+++||++||+ . + .
T Consensus 271 ~~~~~p~~l~~~~g~s--~~~a~~~----~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 271 MDNIIAEYFYDRFGLS--LETAGAI----AASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHhHHHHHHHHhcCCC--HHHHHHH----HHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34456766654 6773 4433333 33677899999999999999998762 1 1 0
Q ss_pred --------HHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 69 --------GYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 69 --------~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.....++.+ ..+..+.+.+|+.| +.|++..|+....+.+++.+.+.+..
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~ 404 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF 404 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH
Confidence 000000000 11233455666654 68999999998888788877776653
No 138
>PTZ00207 hypothetical protein; Provisional
Probab=97.94 E-value=8.9e-05 Score=60.19 Aligned_cols=101 Identities=10% Similarity=0.070 Sum_probs=62.9
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HH---------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LG--------- 69 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~--------- 69 (145)
+..+.+.|.+.+++|.+ ......+.+ .... .....++.|++.||+|||+++ +.
T Consensus 44 y~fsv~s~~L~~~lgls--~~~l~~i~s----vg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLT--QRDLSTITT----VGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcC--HHHHHHHHH----HHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45566788888889995 443333332 2122 223556789999999999998 00
Q ss_pred ---------HHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 70 ---------YTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 70 ---------~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
+.+..+.+. .+.......+.|| +.|++..|+......+|+.+.+.+..
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~ 176 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQL 176 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 1223346678897 68999999999998888876554444
No 139
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.93 E-value=4.2e-05 Score=60.36 Aligned_cols=111 Identities=11% Similarity=0.057 Sum_probs=65.5
Q ss_pred hhhhchHHHHHhHHHHHhhhCCCCCcc-hhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------
Q 036778 4 QTLGGSTAIAYYASSIFDVASNKLSTK-FGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------- 67 (145)
Q Consensus 4 ~~~~g~~~~~~~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------- 67 (145)
+.+.+....+++.|.+.++ ..+.... ....+. .+...++.+++|+++||+|+||++
T Consensus 263 ~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~-------~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 263 ATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFG-------PFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHH-------HHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 3444555566688888776 2220111 112222 267788889999999999999977
Q ss_pred ----------------HHHHHHhhcccc-chhhhhhcccCCc---------------------chhhhHHHHHHHHHHHH
Q 036778 68 ----------------LGYTITFSKGMV-RLPNLIMFETFSI---------------------NIKGSAGSLVTFLHNNS 109 (145)
Q Consensus 68 ----------------~~~~~~~~~~~~-~~~~~~~~e~~p~---------------------~~R~~~~~~~~~~~~~~ 109 (145)
.....+...|.+ ...+-+++++||. +.-+...|+..+++.+|
T Consensus 335 l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~G 414 (462)
T PRK15034 335 LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVG 414 (462)
T ss_pred HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcc
Confidence 000011122333 2344577788874 13445667777777777
Q ss_pred HHHHHHHHHHHhh
Q 036778 110 NSLVAYAFNFMIE 122 (145)
Q Consensus 110 ~~~~~~~~~~~~~ 122 (145)
+++.|..+....+
T Consensus 415 gf~~p~~~g~~~~ 427 (462)
T PRK15034 415 GFFIPQAFGMSLN 427 (462)
T ss_pred cchhhHHHHHHHH
Confidence 7777777665543
No 140
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.87 E-value=0.00018 Score=57.11 Aligned_cols=110 Identities=14% Similarity=0.070 Sum_probs=78.7
Q ss_pred hchHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCCh--HHH----------------
Q 036778 7 GGSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRR--PLL---------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr--~~~---------------- 67 (145)
.|.+++......+.+ .+|++ ......... .-++.+++|+++++++.||+|.| +++
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s--~~~l~~~~l----~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMS--TTQLIVFGL----VVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcC--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHH
Confidence 566777766666666 58995 332222211 44588999999999999999988 666
Q ss_pred ---------------HHHHHHhhc---cccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---------------LGYTITFSK---GMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---------------~~~~~~~~~---~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+.+....+. +..+..-.+.+|+.|+...+...|+....+...++++|.++..+.+
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111 1124455788999999999999999999999999999999988765
No 141
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.86 E-value=7.8e-05 Score=59.14 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=63.7
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHh----hhCChHHHH----------HHHHHh-
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLAD----KFGRRPLLL----------GYTITF- 74 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D----r~grr~~~~----------~~~~~~- 74 (145)
.....+.+.+++.+|.+ ......+.. +..+..++.+++.|+++| |+||||.+. .....+
T Consensus 21 ~l~~~~l~~yl~~lg~~--~~~~~~i~~----~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 21 ALQLSLLTPYVQELGIP--HAWASIIWL----CGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHcCCC--HHHHHHHHH----HHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 44445566678888984 443333332 555888999999999999 599999880 000000
Q ss_pred -----------------------h---------cc-ccchhhhhhcccCCcchh--hhHHHHHHHHHHHHHHHHHHHH
Q 036778 75 -----------------------S---------KG-MVRLPNLIMFETFSINIK--GSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 75 -----------------------~---------~~-~~~~~~~~~~e~~p~~~R--~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
. .. ..+..-++++|+.|.+.| ..+.++......+|+.++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAG 172 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 012234688999999876 4677776666666666655443
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.80 E-value=0.00015 Score=55.40 Aligned_cols=107 Identities=7% Similarity=-0.120 Sum_probs=69.9
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+......|.|.++++.|. +..+..++.+ .+.+...++.++.+.++||.|||+..
T Consensus 19 ~~~~~~p~l~~~l~~~g~--s~~~ig~~~s----~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 92 (382)
T TIGR00902 19 AYGIFLPFFPAWLKGIGL--GEEMIGLLIG----AALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAH 92 (382)
T ss_pred HHHHHHHHHHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344555677888999998 4555554444 77788889999999999999985433
Q ss_pred -----HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.. ..+....+..| +.+.|++.++.....+.+|..+++.+..++.+
T Consensus 93 ~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~ 153 (382)
T TIGR00902 93 NAWLLFIAIGLFALFFSAGMPIGDALANT--WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIG 153 (382)
T ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHH--HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011111 12333334433 24678888999988888888888887777765
No 143
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.80 E-value=8e-05 Score=57.52 Aligned_cols=98 Identities=12% Similarity=0.004 Sum_probs=59.0
Q ss_pred HhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH--------H-HHHHH------
Q 036778 14 YYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL--------L-GYTIT------ 73 (145)
Q Consensus 14 ~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~--------~-~~~~~------ 73 (145)
.|.+.++ +.+|. ++.....+. ++..+...+..++.|+++|| +||||.+ . .....
T Consensus 20 ~~l~~~~~~~~g~--s~~~~g~i~----~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~ 93 (437)
T TIGR00792 20 TYLLFFYTDVLGL--SAAFVGTLF----LVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF 93 (437)
T ss_pred HHHHHHHHHccCC--CHHHHHHHH----HHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC
Confidence 3444444 45888 454444433 37778889999999999998 5775644 0 00000
Q ss_pred ---------------hhcc--c-cchhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 74 ---------------FSKG--M-VRLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 74 ---------------~~~~--~-~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
++.+ . .....++.+|+. +++.|++..++......+|+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~ 156 (437)
T TIGR00792 94 SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIV 156 (437)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 011235667876 568899999988877777766655543
No 144
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.80 E-value=0.00015 Score=55.45 Aligned_cols=82 Identities=11% Similarity=-0.021 Sum_probs=57.5
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhcccc---chhhhhhcccCCcch
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKGMV---RLPNLIMFETFSINI 94 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~~~---~~~~~~~~e~~p~~~ 94 (145)
+++.+..+++.+..+++.||+|||+.+ ....+..+.+.+ +....+..+..|.+.
T Consensus 265 ~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (408)
T PRK09874 265 SVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI 344 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc
Confidence 355577778888899999999999987 001111111111 222345567788899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 95 KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 95 R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
|++.+++......++..+++.+...+.+
T Consensus 345 ~g~~~~~~~~~~~~g~~~gp~~~G~l~~ 372 (408)
T PRK09874 345 AGRIFSYNQSFRDIGNVTGPLMGAAISA 372 (408)
T ss_pred ceeeehHHHHHHHHHHHhhHHHHHHHHh
Confidence 9999999998888999898888877754
No 145
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.79 E-value=0.00025 Score=54.25 Aligned_cols=107 Identities=12% Similarity=0.024 Sum_probs=69.5
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
......+.|.+.++.|. ++.....+.+ +..++..++....+.+.||+|+|+++
T Consensus 221 ~~~~~~~~~~~l~~~g~--s~~~~g~l~~----~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGI--SASATGLLWG----IGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFP 294 (382)
T ss_pred HHHHHHHHHHHHHHCCC--CHhHHHHHHH----HHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHH
Confidence 34445566777788888 4444433333 56688888888999999999999987
Q ss_pred --HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHH-HHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTF-LHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 122 (145)
.......+.+.+ +....++.+. |.+.|+++.++.+. ...++..+++.+.+++.+
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111111111 2334577787 99999999998764 445677777777777655
No 146
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.79 E-value=7e-05 Score=58.03 Aligned_cols=110 Identities=13% Similarity=0.055 Sum_probs=81.4
Q ss_pred hchHHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------
Q 036778 7 GGSTAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------ 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------ 67 (145)
.|.+++.-+...+.+ ++|++ +.+ ..+... ..++.+++|+++.++|.||+|-|+++
T Consensus 266 DGv~til~~~~~fg~~~~gls-~~~-lll~g~----~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~ 339 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLS-STE-LLLIGI----ALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE 339 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCcc-HHH-HHHHHH----HHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc
Confidence 677888777777777 58995 333 222222 44589999999999999999999887
Q ss_pred -----HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+++....+ .+..+..=.|.+++.|++.-++..|+....++...+++|.....+.+
T Consensus 340 ~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 340 GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 12212222 22334556789999999999999999999999999999988877655
No 147
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.78 E-value=0.00021 Score=53.94 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=62.4
Q ss_pred HHHHHhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------H-H-------
Q 036778 10 TAIAYYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------L-G------- 69 (145)
Q Consensus 10 ~~~~~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~-~------- 69 (145)
.....+.|.+.+ +.|.+ +.....+. +...++..++.++.+++.||+|||+.+ . .
T Consensus 223 ~~~~~~~~~~~~~~~g~~--~~~~g~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (385)
T TIGR00710 223 FAFFSGAPFVYIDIMGVS--PSVFGLLF----ALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG 296 (385)
T ss_pred HHHHHcChHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334445566665 47773 43333322 255688889999999999999999876 0 0
Q ss_pred ---------HHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 70 ---------YTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 70 ---------~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.....+.+. .+....+..|..| +.|+++.++.+.....++.+.+....
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 297 LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 1334456678777 57899999988777665555555544
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.00032 Score=54.28 Aligned_cols=111 Identities=16% Similarity=0.055 Sum_probs=74.3
Q ss_pred hhhchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------
Q 036778 5 TLGGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------- 67 (145)
Q Consensus 5 ~~~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------- 67 (145)
..+|.+..+.|...++++ .|++ +....+..- .+.++.++|..++|++.|| +.|+.+
T Consensus 223 ~~~g~F~~ftYi~P~L~~v~g~s--~~~vs~~Ll----~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 223 FMTGHFALYTYIRPFLESVAGFS--VSAVSLVLL----AFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF 295 (394)
T ss_pred HHcchhhhHHhHHHHHHHccCCC--HhHHHHHHH----HHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH
Confidence 456667777777666665 7774 443333322 5669999999999999999 766666
Q ss_pred --------HHHHHHhhccccchhhhhhcccCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --------LGYTITFSKGMVRLPNLIMFETFS--INIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------~~~~~~~~~~~~~~~~~~~~e~~p--~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+....+....+..++.+ ++.+..+.++.....++|..++..+...+.+
T Consensus 296 ~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~ 360 (394)
T COG2814 296 TGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLD 360 (394)
T ss_pred hcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122233333333344444444 6789999999999999998888888877765
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.72 E-value=0.0003 Score=55.91 Aligned_cols=102 Identities=10% Similarity=0.044 Sum_probs=65.4
Q ss_pred hHHHH-HhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH-----------HHH-----------
Q 036778 15 YASSI-FDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL-----------GYT----------- 71 (145)
Q Consensus 15 ~~~~i-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~-----------~~~----------- 71 (145)
+.+.+ .+..|.+ ......... ....++.+++.+++++++||+|||+.+. .+.
T Consensus 244 ~~~~~l~~~~G~s--~~~~g~~~~---~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~ 318 (491)
T PRK11010 244 LTTTFLIRGVGFD--AGEVGLVNK---TLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYS 318 (491)
T ss_pred HHHHHHHHhcCCC--HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 33444 4557874 443332221 1233678899999999999999988760 000
Q ss_pred -----HH----hhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 -----IT----FSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 -----~~----~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+. .+.+ .+..+++..+..|.+.+++..++.+....++..+.+.+.+++.+
T Consensus 319 l~~~~~l~~~~~g~~-~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~ 377 (491)
T PRK11010 319 MGAAVFFENLCGGMG-TAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE 377 (491)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0111 12234677788999999999999998888888777777776665
No 150
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.72 E-value=5.8e-05 Score=56.79 Aligned_cols=93 Identities=13% Similarity=0.085 Sum_probs=56.0
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHHH------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGYT------ 71 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~~------ 71 (145)
..+..+.|.++++ +|.+ ........ +...+...++.++++++.||+|||+.+ ....
T Consensus 242 ~~~~~~~~~~~~~~~g~~--~~~~~~~~----~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLS--KVTAGAYA----SLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP 315 (366)
T ss_pred HHHHHHHHHHHHHHcCCc--HHHHHHHH----HHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc
Confidence 3445566777765 6774 44333222 255678888999999999999998765 0000
Q ss_pred ------------HHhhcccc-chhhhhhcccCCcchhhhHHHHHHHHHHHH
Q 036778 72 ------------ITFSKGMV-RLPNLIMFETFSINIKGSAGSLVTFLHNNS 109 (145)
Q Consensus 72 ------------~~~~~~~~-~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~ 109 (145)
.....+.. +..+.+.+|+.| +.|++..|+....+++|
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 316 LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 00011111 334566677776 57888888777665543
No 151
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.70 E-value=0.00036 Score=53.92 Aligned_cols=81 Identities=22% Similarity=0.249 Sum_probs=58.0
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH------------------------HHHHHHhhccc---cchhhhhhcccCC---
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL------------------------LGYTITFSKGM---VRLPNLIMFETFS--- 91 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~------------------------~~~~~~~~~~~---~~~~~~~~~e~~p--- 91 (145)
...++.+++.++.++++||+|||+.+ .......+.+. .+..+.+.+|..+
T Consensus 265 ~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (437)
T TIGR00792 265 IAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGE 344 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 55688889999999999999999987 00000011111 1345567777754
Q ss_pred ----cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 92 ----INIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 92 ----~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.+++..|+.+....++..+++.+.+++.+
T Consensus 345 ~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 345 WKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567888999999999999999988888765
No 152
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.68 E-value=0.00015 Score=54.70 Aligned_cols=53 Identities=6% Similarity=-0.213 Sum_probs=34.0
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
.....+.|.+.++.|.+ ......... ....+..+++.++++++.||+|||+.+
T Consensus 226 ~~~~~~~~~~l~~~g~~--~~~~g~~~~---~~~~~~~~~g~~~~g~l~~r~g~~~~l 278 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFS--KEEIALVAK---INGLLGAILGGLIGGIIMQPLNILYAL 278 (356)
T ss_pred HHHHHHHHHHHHHcCCC--HHHHHHHhH---HHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 34445667777777774 443332222 011245678899999999999998887
No 153
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.67 E-value=0.00043 Score=53.14 Aligned_cols=107 Identities=10% Similarity=-0.077 Sum_probs=55.4
Q ss_pred HHHHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 10 TAIAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
..+..+.|... +++|.+ .....++.+ +........+.+.+++ .||+||||.+
T Consensus 32 ~~~~p~~~~~l~~~~~~s--~~~~g~~~~---~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 105 (393)
T PRK15011 32 ALQTPTLSIFLTDEVHAR--PAMVGFFFT---GSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNY 105 (393)
T ss_pred HHHHHHHHHHHHhhcCCC--HHHHHHHHH---HHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 33444555554 458884 443333322 1223345555655666 9999998864
Q ss_pred --HHHH-HHh---hccccchhhhhhcccCCcchhhh--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYT-ITF---SKGMVRLPNLIMFETFSINIKGS--AGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~-~~~---~~~~~~~~~~~~~e~~p~~~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+... ... +....+....+..|..|++.|.. ..++......+|..+++.+..++.+
T Consensus 106 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~ 168 (393)
T PRK15011 106 FVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM 168 (393)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 0000 000 11111333345556555554532 2356666677788888777776653
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.66 E-value=0.0003 Score=53.72 Aligned_cols=107 Identities=7% Similarity=-0.101 Sum_probs=67.7
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCCh----HHH----------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRR----PLL---------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr----~~~---------------- 67 (145)
+......+.|.+.++.|. +.....+..+ .+.+...++.++.+.++||+||| +.+
T Consensus 19 ~~g~~~p~l~~~l~~~g~--s~~~iG~~~~----~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (382)
T PRK11128 19 AYGVFLPFWSVWLKGQGY--TPETIGLLLG----AGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAH 92 (382)
T ss_pred HHHHHhhhHHHHHHhcCC--CHHHHHHHHH----HHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334455567788888888 4555544444 77888999999999999999984 332
Q ss_pred -----HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+ ....+...++..+. .+.|+++.+.....+.++..+++.+..++.+
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~ 153 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS 153 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 00001011 11123333444443 3457777788887788888888888877754
No 155
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.65 E-value=0.00037 Score=53.27 Aligned_cols=61 Identities=8% Similarity=-0.098 Sum_probs=42.3
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHH-HHHHhhhCChHHH
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSS-VLLADKFGRRPLL 67 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~Dr~grr~~~ 67 (145)
+.|--.......+.|.++++.|.+ .....+. .+.+.+++..++..++. ++..||.||||.+
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~--~~~iGl~--~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~ 72 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAP--LTALAFL--PLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW 72 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCC--HHHHHHH--HHHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence 345455566677899999999984 4433332 12346778887777777 5678999988885
No 156
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.63 E-value=0.00012 Score=54.65 Aligned_cols=101 Identities=9% Similarity=0.001 Sum_probs=67.5
Q ss_pred HHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------HHHHH
Q 036778 16 ASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------LGYTI 72 (145)
Q Consensus 16 ~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------~~~~~ 72 (145)
.|.+++ .+|.+ +.....+.+ .-.+...+.+++.|.++||.||+..+ .....
T Consensus 287 g~~fF~~rfGlS--~~~a~~i~s----~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~ 360 (459)
T KOG4686|consen 287 GPMFFQKRFGLS--AVSAGNILS----TVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMT 360 (459)
T ss_pred hHHHHHHhhCCC--hhhccchhh----hhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHH
Confidence 344444 48884 332222222 33456667788999999999999887 11111
Q ss_pred Hhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 73 TFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 73 ~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+.+.. ..+..|..++-+.|.+.-+++.|+++.+.++|..+.+.+...+.+
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d 413 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIAD 413 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeec
Confidence 11111 113357777888999999999999999999999999888877653
No 157
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.63 E-value=0.00019 Score=55.42 Aligned_cols=81 Identities=7% Similarity=0.084 Sum_probs=54.0
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH-----------------------HHHHHhhcccc---chhhhhhcccCCcchh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL-----------------------GYTITFSKGMV---RLPNLIMFETFSINIK 95 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~-----------------------~~~~~~~~~~~---~~~~~~~~e~~p~~~R 95 (145)
...++..++.+..+++.||+|||+.+. ......+.+.. +....+..|.+|++.|
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 349 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLS 349 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccce
Confidence 556778889999999999999999870 00000111110 1223566788999999
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 036778 96 GSAGSL-VTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 96 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 122 (145)
++..+. .+....++..+++.+..++.+
T Consensus 350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~ 377 (420)
T PRK09528 350 ATIYLVGFQFAKQLGAVFLSTLAGNLYD 377 (420)
T ss_pred eeeeeehHHHHHHHHHHHHHHHHHHHHH
Confidence 887665 345567777787877777765
No 158
>PRK11043 putative transporter; Provisional
Probab=97.60 E-value=0.00068 Score=51.94 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=63.9
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------HHHH-------
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------LGYT------- 71 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------~~~~------- 71 (145)
....+.|.+.++.|.+ ........ ....++..++....+++.||++||+.. ....
T Consensus 221 ~~~~~~p~~~~~~g~s--~~~~g~~~----~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (401)
T PRK11043 221 AWLTGSPFILEQMGYS--PADIGLSY----VPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHP 294 (401)
T ss_pred HHHHHhHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3445667777777774 44333222 244567788888899999999988854 0000
Q ss_pred ---------HHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ---------ITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ---------~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
...+.+.+ +.......|..| +.|+++.++.+..+..++..++.+.+.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 295 SLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 00011111 222234446666 579999999998887777777777765543
No 159
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.60 E-value=0.00064 Score=52.00 Aligned_cols=104 Identities=8% Similarity=-0.020 Sum_probs=65.1
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhh-hhhhhHHHHHHHHHhhhCChHHHHHH---H-----HHh--h------
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQS-LFQVPVVGSSVLLADKFGRRPLLLGY---T-----ITF--S------ 75 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~Dr~grr~~~~~~---~-----~~~--~------ 75 (145)
..+.+.+.++.|. ++........ ... +...++.++.+++.||+|+|+.+... . ... .
T Consensus 228 ~~~~~~~l~~~G~--s~~~ig~~~~----~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 301 (390)
T TIGR02718 228 FGLSKLYLVDAGW--PLEWIGRLGM----AGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP 301 (390)
T ss_pred HHHhhHHHHhcCC--CHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 3355666777888 4544443332 222 34556788899999999999987100 0 000 0
Q ss_pred ---------------cccc-chhhhhhcccCCc-chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 76 ---------------KGMV-RLPNLIMFETFSI-NIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 76 ---------------~~~~-~~~~~~~~e~~p~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.. +.......+..++ +.|++.+++.+....++..+++.+..++.+
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 302 GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 1122344455555 889999999999999999999988887765
No 160
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.59 E-value=0.00043 Score=59.75 Aligned_cols=99 Identities=10% Similarity=-0.123 Sum_probs=62.9
Q ss_pred HHhHHHHHhh-hCCCCCcc-hhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 13 AYYASSIFDV-ASNKLSTK-FGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 13 ~~~~~~i~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
..+.|.++++ +|.+ .. ...++ .+...++.+++.++.+++.||+++|+.+
T Consensus 252 ~~~~~~~~~~~~g~s--~~~~~g~~----~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (1146)
T PRK08633 252 QANFPAYAKEVLGLD--NTFQVQYL----LAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASV 325 (1146)
T ss_pred HHhhHHHHHHHhCCC--cHHHHHHH----HHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHH
Confidence 3445555554 7774 33 33333 2356688888999999999999988765
Q ss_pred HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 68 LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 68 ~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
.+..+.++.+. .+....++.+..|.+.|++++++.+.+..++..+++.+.
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 326 LVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 01111111111 133457788999999999999998887777665444333
No 161
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.57 E-value=0.00013 Score=57.32 Aligned_cols=104 Identities=14% Similarity=0.049 Sum_probs=68.6
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh--CChHHH-----------------------
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF--GRRPLL----------------------- 67 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--grr~~~----------------------- 67 (145)
..|.|.+.++.|. +........+ +..++..++.++.+++.||. ++|+..
T Consensus 261 ~~~l~~~~~~~g~--s~~~~g~~~~----~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~ 334 (455)
T TIGR00892 261 IIFLVPYAKDKGV--DEYEAAFLLS----IIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYT 334 (455)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 3456777777777 3444443333 55677888888999999974 333222
Q ss_pred --HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
......++.+.+ +..+.+..|.+|.+.|++++++.+....++.++++.+..++.+
T Consensus 335 ~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 335 GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 011111111211 3345677899999999999999999999999998888876654
No 162
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.51 E-value=0.00099 Score=50.41 Aligned_cols=51 Identities=8% Similarity=0.075 Sum_probs=34.1
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
....+.|.+..+ .|. ++........ ...++..++.++.+++.||+|||+.+
T Consensus 212 ~~~~~~~~~~~~~~g~--s~~~~g~~~~----~~~~~~~~~~~~~g~l~~r~g~~~~~ 263 (377)
T PRK11102 212 SFLTAGPFVYIELNGV--SPQNFGYYFA----LNIVFLFVMTIINSRFVRRVGALNML 263 (377)
T ss_pred HHHHcCHHHHHHHhCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 333344555544 677 3443333322 55688888999999999999999877
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.50 E-value=0.00013 Score=56.58 Aligned_cols=106 Identities=19% Similarity=0.199 Sum_probs=69.9
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh--CChHHH--------------------
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF--GRRPLL-------------------- 67 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--grr~~~-------------------- 67 (145)
.+..+.|.++.+ .|++ ........+ .+=+++++|++++||++||. |||...
T Consensus 270 gi~dW~p~YL~e~k~~s--~~~a~~a~~----lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~ 343 (448)
T COG2271 270 GINDWGPLYLSEVKGFS--LVKANWAIS----LFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPN 343 (448)
T ss_pred HHhhhHHHHHHHhcCCC--HHHHHHHHH----HHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCC
Confidence 345678888876 5553 333333333 55688999999999999997 788776
Q ss_pred --------HHH-HHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 68 --------LGY-TITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------~~~-~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
.++ +.++-.++.-+.-....|..|++.-+++.|+...++.+ |...+....+++.+
T Consensus 344 ~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 344 GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 001 11111122222334567999999999999999988888 66666666666644
No 164
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.50 E-value=0.00044 Score=54.77 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=75.1
Q ss_pred hhhhhchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCCh--------HHH------
Q 036778 3 MQTLGGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRR--------PLL------ 67 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr--------~~~------ 67 (145)
+++..+.+.+..|.|+++++ +|++ ..... ++++.+.+...+..+++|.++||.-+| |.+
T Consensus 268 f~~~~~~~~l~~y~PtY~~~VL~f~--v~~~G----~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~ 341 (466)
T KOG2532|consen 268 FGGNWGFYLLLTYLPTYLKEVLGFD--VRETG----FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFG 341 (466)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCCC--hhhhh----HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHH
Confidence 45667788888999999998 8884 44333 445599999999999999999999664 222
Q ss_pred ---------------------HHHHHHhhccccchhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 ---------------------LGYTITFSKGMVRLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ---------------------~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.++....+.......-.+..-.- .++.-+..+|+.+.+..+.+++.|.+.+.+.
T Consensus 342 ~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 342 GPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred HHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEe
Confidence 11111111111111112223333 6667788888888888888888888877665
No 165
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.49 E-value=0.00086 Score=50.23 Aligned_cols=104 Identities=3% Similarity=-0.063 Sum_probs=63.8
Q ss_pred HHHHhHHHHHhh---hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------H---------
Q 036778 11 AIAYYASSIFDV---ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------G--------- 69 (145)
Q Consensus 11 ~~~~~~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~--------- 69 (145)
.+..+.+.++++ .|. ++.......+ .++.+.++|.++++++.||+|+||.+. .
T Consensus 158 ~~~~w~~~yl~~~~~~g~--s~~~a~~~~s----~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~ 231 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGL--PEDQAAHFTA----YTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGY 231 (310)
T ss_pred HHHHHHHHHHHhcccCCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 344466677754 355 4444444434 788999999999999999999988870 0
Q ss_pred ----HHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 ----YTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ----~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+. .|.......+.+|.+ .+++.++. .++.+|+.+.|.+...+.+
T Consensus 232 ~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 232 VAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 000011111 144445666777754 33455553 5667888888887776654
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.47 E-value=0.00089 Score=51.14 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=57.2
Q ss_pred hHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------H--------------H
Q 036778 15 YASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------L--------------G 69 (145)
Q Consensus 15 ~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------~--------------~ 69 (145)
|.+.+++ ..|. ++........ ...++..++.++.+++.||+|+|+.. . .
T Consensus 221 ~~~~~~~~~~g~--s~~~~~~~~~----~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 294 (382)
T PRK10091 221 YIKPYMMFISGF--SETSMTFIMM----LVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLI 294 (382)
T ss_pred HHHHHHHHhcCC--CHHHHHHHHH----HHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4444444 4677 3443333322 56688999999999999999999887 0 0
Q ss_pred HHHHhhcccc---c-hhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 YTITFSKGMV---R-LPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ~~~~~~~~~~---~-~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+.. + .......+..|.+.++.+ ..+....+|..+++.+..++.+
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 295 FAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHH
Confidence 0000001111 1 111233344455545443 3456677888888888877765
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.41 E-value=0.00071 Score=54.37 Aligned_cols=81 Identities=21% Similarity=0.141 Sum_probs=56.8
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhhccc-----cchhhhhhccc
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFSKGM-----VRLPNLIMFET 89 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~~~~-----~~~~~~~~~e~ 89 (145)
+...+-.++.++++|.++||++|||++ .++...+..+. .|.-.++++|+
T Consensus 52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~l 131 (524)
T PF05977_consen 52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPEL 131 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355577778889999999999999998 11111111111 24456789999
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 90 FSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 90 ~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.|++....+.++.....++...++|.+.+.+.
T Consensus 132 V~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 132 VPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred ccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 99999999999988877776666665555444
No 168
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.00046 Score=53.46 Aligned_cols=108 Identities=14% Similarity=0.126 Sum_probs=68.6
Q ss_pred hchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------
Q 036778 7 GGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------ 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------ 67 (145)
.+...++.+.|.++++ +|.+ ....... .+..-+.+.+.-+.+|+++||+|.+|.+
T Consensus 232 G~Fvgfs~~l~~~~~~~fg~~--~~~Ag~~----a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 232 GGFVGFSAYLPMYLVTQFGLS--PVTAGLI----AFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCCC--hhhHHHH----HHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccc
Confidence 3445566788888875 7885 3322222 2244477777888999999999988887
Q ss_pred ----------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ----------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+....+.+.+-+ ..+..++.+||. .-+...|++.+++.+|++..|..+....+
T Consensus 306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~ 374 (417)
T COG2223 306 TGFGHGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLD 374 (417)
T ss_pred cccccCcchHHHHHHHHHHHHHhccCcc-hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHH
Confidence 011111122222 344667777776 34566788888888888777777665543
No 169
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.27 E-value=0.00023 Score=56.25 Aligned_cols=94 Identities=11% Similarity=-0.048 Sum_probs=61.4
Q ss_pred hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-CChHHHH-------------------------HHHHHhhc
Q 036778 23 ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-GRRPLLL-------------------------GYTITFSK 76 (145)
Q Consensus 23 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-grr~~~~-------------------------~~~~~~~~ 76 (145)
+|++ ...+..+.+ .|...--+..+++||++||+ |+|+.+. .......+
T Consensus 56 Lg~~--~~~A~~l~~----~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~i 129 (498)
T COG3104 56 LGFD--ETHATGLFS----AYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIV 129 (498)
T ss_pred CCcC--hHhhHHHHH----HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHh
Confidence 4473 444444433 44444445778999999997 9888870 00000011
Q ss_pred ccc---chhhhhhcccCCcch--hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 77 GMV---RLPNLIMFETFSINI--KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 77 ~~~---~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
|.+ +..-.+.+|.+|++. |..+.++-++..++|+++.+.+.+++.+
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 111 444468889987765 7777888888889999999999998876
No 170
>PRK09848 glucuronide transporter; Provisional
Probab=97.21 E-value=0.0014 Score=51.12 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=51.6
Q ss_pred hhhhhhHHHHHHHHHhhhCChHHHH----H---------------------HHHHhhccc---cchhhhhhcccCCc---
Q 036778 44 SLFQVPVVGSSVLLADKFGRRPLLL----G---------------------YTITFSKGM---VRLPNLIMFETFSI--- 92 (145)
Q Consensus 44 ~~~~~~~~~~~~~l~Dr~grr~~~~----~---------------------~~~~~~~~~---~~~~~~~~~e~~p~--- 92 (145)
.+..+++.++.+++.||+|+|+.+. + .....+.+. .+..++..+|..|.
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 3556778889999999999999870 0 000011111 13344566666654
Q ss_pred ----chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 93 ----NIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 93 ----~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+.++...++......++..+++.+...+..
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345888888888888888888877766654
No 171
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.19 E-value=0.0038 Score=47.97 Aligned_cols=101 Identities=9% Similarity=-0.171 Sum_probs=60.3
Q ss_pred hHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------HHH-------------
Q 036778 15 YASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------GYT------------- 71 (145)
Q Consensus 15 ~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~~~------------- 71 (145)
+.|.++++ .|.+ +....... ....++..++.+..+++.||++||+.+. ...
T Consensus 237 ~~p~~~~~~~g~~--~~~~g~~~----~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 310 (406)
T PRK15402 237 LSPVILISGEQLS--SYEYGLLQ----VPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYL 310 (406)
T ss_pred HhHHHHHHHhCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHH
Confidence 45666544 6773 43332221 1334667788899999999999999770 000
Q ss_pred ------HHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 72 ------ITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ------~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..++.+.+ +...... ...+.+.|++..+.......++..+++.+...+..
T Consensus 311 ~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 311 WLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00111111 1111122 22344789999999998888888888887777654
No 172
>PRK09669 putative symporter YagG; Provisional
Probab=97.18 E-value=0.00098 Score=52.02 Aligned_cols=99 Identities=9% Similarity=-0.039 Sum_probs=58.9
Q ss_pred HHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHHH------------------
Q 036778 12 IAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLLL------------------ 68 (145)
Q Consensus 12 ~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~~------------------ 68 (145)
+..|.+.++.+ +|+ +......+.. +.-+.-.+..++.|+++|| +||||.++
T Consensus 28 ~~~~l~~~~t~~~gl--s~~~~g~i~~----i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p 101 (444)
T PRK09669 28 VMLFLAYFYTDVFGL--SAAIMGTMFL----VVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP 101 (444)
T ss_pred HHHHHHHHHHHhcCC--CHHHHHHHHH----HHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC
Confidence 34455555554 888 4544443333 5667778888999999999 66655540
Q ss_pred ----------------HHHHHhhccccchhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 69 ----------------GYTITFSKGMVRLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 69 ----------------~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
++...+.. ......++.+|+. +.+.|.+..+.......+|+.+.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~ 166 (444)
T PRK09669 102 DFGATGKIIYACVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIA 166 (444)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 1111235777877 557799888887777777766665543
No 173
>PRK10133 L-fucose transporter; Provisional
Probab=97.17 E-value=0.0021 Score=50.40 Aligned_cols=100 Identities=9% Similarity=0.017 Sum_probs=57.2
Q ss_pred HhHHHH-Hhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHH---------H-------------
Q 036778 14 YYASSI-FDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLL---------G------------- 69 (145)
Q Consensus 14 ~~~~~i-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~------------- 69 (145)
.|.+.+ .++ .|. ++........ .+.++.+++.+.++++.||+|||+++. +
T Consensus 279 ~~~~~~l~~~~~g~--s~~~ag~~~~----~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 352 (438)
T PRK10133 279 SYLIRYAVEEIPGM--TAGFAANYLT----GTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLI 352 (438)
T ss_pred HHHHHHHhhhcCCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 355545 343 577 4544443333 666889999999999999999998870 0
Q ss_pred HHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 70 YTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 70 ~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.....+.+ ..|..+....|.+|.+ .+.+.++.. +...++.+.+.+...+.
T Consensus 353 ~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 353 ALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVS 405 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHH
Confidence 00011111 1144455666777653 345555554 33455566665555543
No 174
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0043 Score=48.12 Aligned_cols=104 Identities=10% Similarity=-0.121 Sum_probs=74.7
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------------HHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------------LGY 70 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------------~~~ 70 (145)
..|.+-+.++.+ ..+...+-- ++..+.++.++..+++++|+|+|+-+ +..
T Consensus 35 Lip~l~~~f~ls--~~~a~liqf----aff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL 108 (422)
T COG0738 35 LIPHLKEVFDLT--YFEASLIQF----AFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFL 108 (422)
T ss_pred hHHHHHHHhCcc--HHHHHHHHH----HHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 456666666663 333333333 67788999999999999999999988 111
Q ss_pred H--HHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036778 71 T--ITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEWS 124 (145)
Q Consensus 71 ~--~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (145)
. +..+.|.+ ...-.|++.+.|++..++-+.+.+..+.+|++++|.+..+++.|+
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~ 167 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG 167 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 1 11122222 334468888999988999999999999999999999998888765
No 175
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.16 E-value=0.0049 Score=47.09 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=60.1
Q ss_pred HHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------H
Q 036778 12 IAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------L 68 (145)
Q Consensus 12 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~ 68 (145)
...+.|.+.++.|. ++.......+ ...+..++..+..+++.||+|+|+.+ .
T Consensus 224 ~~~~~~~~~~~~g~--s~~~~g~~~~----~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK11128 224 YYGFSAIYWQAAGY--SASTIGYLWS----LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLI 297 (382)
T ss_pred HHHHHHHHHHHCCC--CHhHHHHHHH----HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 34455666677777 3443333322 44577788888999999999999987 0
Q ss_pred HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 036778 69 GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFL-HNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 69 ~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 122 (145)
...+.++.+.+ +....+..+. +++.+++..++.... ..++..+++.+.+.+.+
T Consensus 298 ~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 298 VIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 2223455665 555667778776533 33455666766666654
No 176
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.16 E-value=0.0027 Score=49.35 Aligned_cols=79 Identities=16% Similarity=0.060 Sum_probs=52.5
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH-------------------------HHHHHHhhccccchhhhhhcccCCcchhh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL-------------------------LGYTITFSKGMVRLPNLIMFETFSINIKG 96 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~ 96 (145)
.++.+..+|.++++++.||+++|+.+ +.....+.....|..+....+.++++.+.
T Consensus 277 ~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~ 356 (410)
T TIGR00885 277 GAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKY 356 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 45577889999999999999999877 00111111122256667777888877665
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 97 SAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.++... .+|+.+.|.+..++.+
T Consensus 357 ~s~~l~~~--~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 357 GAAGLVMA--IIGGGIVPPLQGFIID 380 (410)
T ss_pred hHHHHHHH--HhccchHHHHHHHHHH
Confidence 55555543 3788888888777754
No 177
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.15 E-value=0.0021 Score=50.69 Aligned_cols=100 Identities=7% Similarity=-0.050 Sum_probs=58.6
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH---------HHHHHHhh-
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL---------LGYTITFS- 75 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~---------~~~~~~~~- 75 (145)
.+..|.+.++.+ +|+ ++.....+. ++.-+.-.+..++.|+++|| +||||.+ ..+...+.
T Consensus 24 ~~~~~l~~yyt~v~Gl--s~~~vg~i~----~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~ 97 (473)
T PRK10429 24 IVYMYLMYYYTDVVGL--SVGLVGTLF----LVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA 97 (473)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHH----HHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC
Confidence 344556666665 688 454433333 35667778888999999994 5986654 00000110
Q ss_pred --------------------c--cc-cchhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 76 --------------------K--GM-VRLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 76 --------------------~--~~-~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
. +. .....++.+|+. +.+.|.+..++......+++.+.+.+
T Consensus 98 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 98 HLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 011235678987 58889998888666666665555443
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.11 E-value=0.0034 Score=48.12 Aligned_cols=81 Identities=10% Similarity=0.110 Sum_probs=52.3
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHHH-----------------------HHHHhhcccc---chhhhhhcccCCcchh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLLG-----------------------YTITFSKGMV---RLPNLIMFETFSINIK 95 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~~-----------------------~~~~~~~~~~---~~~~~~~~e~~p~~~R 95 (145)
...+...++.+..+++.||+|||+.+.. .....+.+.. .....+..|..|++.|
T Consensus 262 ~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 341 (396)
T TIGR00882 262 MGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLS 341 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceE
Confidence 5557778888999999999999998700 0000011100 1122355677888888
Q ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 036778 96 GSAGSL-VTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 96 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+++.+. .+....++..+++.+..++.+
T Consensus 342 at~~~~~~~~~~~lg~~~~~~l~G~l~~ 369 (396)
T TIGR00882 342 ATIYLIGFQFAKQLAMIFLSTLAGNMYD 369 (396)
T ss_pred EEeehHHHHHHHHHHHHHHHHhHHHHHH
Confidence 887766 456677788888877777754
No 179
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.08 E-value=0.0037 Score=47.73 Aligned_cols=48 Identities=10% Similarity=-0.028 Sum_probs=32.6
Q ss_pred HhHHHHHh-hhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 14 YYASSIFD-VASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 14 ~~~~~i~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
.+.|.+.. +.|.+ ....... .+...++.+++.+..+++.||+|||+.+
T Consensus 224 ~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~~i~~~~~~~~l~~r~g~~~~~ 272 (392)
T PRK10473 224 NTSPVLLMEQMGFS--RGEYAII----MALTAGVSMTVSFSTPFALGIFKPRTLM 272 (392)
T ss_pred HhCHHHHHHHcCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 34455554 46774 3333222 2255688889999999999999999987
No 180
>PRK11462 putative transporter; Provisional
Probab=97.03 E-value=0.0077 Score=47.52 Aligned_cols=81 Identities=7% Similarity=-0.009 Sum_probs=49.1
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH---------HHH----------------HHhhcc---ccchhhhhhcccCC--
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL---------GYT----------------ITFSKG---MVRLPNLIMFETFS-- 91 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~---------~~~----------------~~~~~~---~~~~~~~~~~e~~p-- 91 (145)
.+.+..+++.+++++++||+|+|+.+. ... ...+.+ ..+..+.+.+|...
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~ 350 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYG 350 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 555778888999999999999998860 000 000000 01233556666544
Q ss_pred ---cchhhhHH--HHHHHHHHHHHHHHHHHHHHHhh
Q 036778 92 ---INIKGSAG--SLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 92 ---~~~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..|..+. +.......++..+++.+.+++..
T Consensus 351 e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 351 EWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33555555 44446777788887777766654
No 181
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.01 E-value=0.006 Score=47.39 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=68.3
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
+......+.+++.+. ++.+ ...... .....+..+++.++.++++||+|+|+.+
T Consensus 240 ~~~~~~~~~~y~~~~vl~~~---~~~~~~----~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~ 312 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYVLGNE---GLISIF----MLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP 312 (428)
T ss_pred hhhhhhhHHHHHHHHHhcCc---hhhHHH----HHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh
Confidence 334444455566665 4553 212222 2255688899999999999999999988
Q ss_pred ------HHHHHHhhc---cccchhhhhhcccCCc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ------LGYTITFSK---GMVRLPNLIMFETFSI-------NIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ------~~~~~~~~~---~~~~~~~~~~~e~~p~-------~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.......+. .....++++.+|+.+. +..+...|+......++..+++.+...+..
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 011111111 1125667888888763 335677777777888888888888777766
No 182
>PF13347 MFS_2: MFS/sugar transport protein
Probab=96.95 E-value=0.00083 Score=52.18 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=63.9
Q ss_pred hHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHh----hhCChHHH---------HHHHHH-------
Q 036778 15 YASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLAD----KFGRRPLL---------LGYTIT------- 73 (145)
Q Consensus 15 ~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D----r~grr~~~---------~~~~~~------- 73 (145)
|.+.+. +.+|++ +.....+.. +.-+...+..++.|.++| |+||||.+ ..+...
T Consensus 23 ~~~~f~~~~~gl~--~~~~g~i~~----~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 23 YLLYFYTDVLGLS--PALAGLILL----VGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHcCCC--HHHHHHHHH----HHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch
Confidence 444444 457994 543333333 556777778889999999 78988887 000000
Q ss_pred ----------------hhcc--cc-chhhhhhcccCC-cchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 74 ----------------FSKG--MV-RLPNLIMFETFS-INIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 74 ----------------~~~~--~~-~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+..+ .. ....++.+|+.+ .+.|.+..+.......+|..+.+.+.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 0000 00 112367889987 567999999998888888876666666555
No 183
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.91 E-value=0.0051 Score=47.87 Aligned_cols=54 Identities=9% Similarity=-0.095 Sum_probs=36.3
Q ss_pred chHHHHHhHHHHH-hhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCC-hHHH
Q 036778 8 GSTAIAYYASSIF-DVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGR-RPLL 67 (145)
Q Consensus 8 g~~~~~~~~~~i~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~gr-r~~~ 67 (145)
.......+.+..+ ++.|. +..+..++. +.+.++.++++++.|.++||+|| |+.+
T Consensus 17 ~~~~~~~~l~~~l~~~~g~--s~~~iGl~~----a~~~~~~~i~~~~~g~l~dr~g~~r~~~ 72 (418)
T TIGR00889 17 IWGSWLVTLGSYMSKTLHF--SGAEIGWVY----SSTGIAAILMPILVGIIADKWLSAQKVY 72 (418)
T ss_pred HHHHHHHHHHHHHHHhcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3333333444444 45788 455544444 48889999999999999999966 5554
No 184
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0053 Score=49.11 Aligned_cols=83 Identities=14% Similarity=-0.038 Sum_probs=63.6
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HH---HHHHhhccccchhhhhhcccCC
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LG---YTITFSKGMVRLPNLIMFETFS 91 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~---~~~~~~~~~~~~~~~~~~e~~p 91 (145)
.+..+++++..++.+.++++.||++-++.+ .. +...+..+..|..-.+.+..+.
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~ 164 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYG 164 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcC
Confidence 445589999999999999999999966555 11 1111122333555578999999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 92 INIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 92 ~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.+.|++-+++......+|+++++.+...+
T Consensus 165 ~~e~g~r~~~~~a~~~~g~i~ggliA~g~ 193 (495)
T KOG2533|consen 165 KSERGLRMGIWYASASLGNIFGGLIAYGV 193 (495)
T ss_pred hhhhhhhHHHHHHhcchhhHHHHHHHHHh
Confidence 99999999999998899998888888774
No 185
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.86 E-value=0.0033 Score=45.90 Aligned_cols=105 Identities=11% Similarity=0.077 Sum_probs=67.3
Q ss_pred hHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 9 STAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
.+..+.|.|.+-+.+|++ ..+.+.+.. .-+++..+| ++.|.+.||.|.+.++
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~s--q~~l~~l~~----~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGYS--QSQLNTLST----AGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred ccchhhhhHHHHHHhCCC--HHHHHHHHH----HHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 456677999998889995 444433332 344666654 7889999999999987
Q ss_pred --------HH-HHHH--hhcccc-chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 --------LG-YTIT--FSKGMV-RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 --------~~-~~~~--~~~~~~-~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+. +... .+.++. .....-..+.||. .|+++.|+.-....+++.+.+.+...+.
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 11 1111 111111 1122233478984 7999999999888888888777664443
No 186
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=96.85 E-value=0.018 Score=44.35 Aligned_cols=100 Identities=11% Similarity=0.011 Sum_probs=57.1
Q ss_pred HHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHH
Q 036778 16 ASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTI 72 (145)
Q Consensus 16 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~ 72 (145)
.|.+.++.|.+ ......... .+.++..++.++.+++.||.+|+... .....
T Consensus 240 ~p~~~~~~g~s--~~~~g~~~~----~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 240 RPVYMNLAGFG--VDGLTLVLL----SFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHhcCCC--hhHHHHHHH----HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 46677777884 433222222 45578888899999999996555433 00001
Q ss_pred Hhhccc--c-chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 73 TFSKGM--V-RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 73 ~~~~~~--~-~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.++.+. . +....+..+..|. .+++..+.......++..+++.+..++.+
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 1 1122345666663 35566666666677788888888777764
No 187
>PRK09669 putative symporter YagG; Provisional
Probab=96.84 E-value=0.0088 Score=46.70 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=53.0
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH----H----HH-----------------HHhhc---cccchhhhhhcccCC--
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL----G----YT-----------------ITFSK---GMVRLPNLIMFETFS-- 91 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~----~----~~-----------------~~~~~---~~~~~~~~~~~e~~p-- 91 (145)
...+..+++.++.++++||+|+|+.+. . .. ...+. ...+..+++.+|+.+
T Consensus 272 ~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~ 351 (444)
T PRK09669 272 TGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE 351 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 344666778888899999999999870 0 00 00011 111445677888775
Q ss_pred -----cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 92 -----INIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 92 -----~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+..+...++......++..+++.+...+.+
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334556677777888888888888877766
No 188
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.82 E-value=0.0016 Score=52.24 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=67.0
Q ss_pred HhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH------------------------HH
Q 036778 14 YYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------------LG 69 (145)
Q Consensus 14 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------------~~ 69 (145)
.+.+.+.++++.+ .....++.+ +...+..+..++.+.+.||+|.|.+. +.
T Consensus 67 v~~~~~~~~f~~s--~~~~~~i~s----l~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 67 LLFEELMDYFGSS--SSQIAWIGS----LLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred hhHHHHHHHhCCC--ccHHHHHHH----HHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3456677778774 333444444 55566677778999999999999988 12
Q ss_pred HHHHhhcccc----chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 70 YTITFSKGMV----RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 70 ~~~~~~~~~~----~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+.+..+.|.+ |.. ..++ .+-.+.|+.+.|+......+|.++.+.+.-++.+
T Consensus 141 ~gvi~G~G~~~~~~pai-viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAV-VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHhhccchhhhcchh-hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 2222233322 222 3333 4556789999999998888888888888877765
No 189
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.82 E-value=0.013 Score=45.69 Aligned_cols=106 Identities=10% Similarity=0.055 Sum_probs=71.9
Q ss_pred HHHHhHHHHHhhhC-CCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------HHHH----------
Q 036778 11 AIAYYASSIFDVAS-NKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------LGYT---------- 71 (145)
Q Consensus 11 ~~~~~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------~~~~---------- 71 (145)
....|.+.++++.| .+ ......+ .+...++.++.....+++..|+|.|+++ .++.
T Consensus 225 ~~~~f~~~yl~~~gg~~--~~~~g~~----~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~ 298 (400)
T PF03825_consen 225 AYYTFFSIYLQELGGYS--GSTIGIL----WALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWP 298 (400)
T ss_pred HHHHHHHHHHHHcccch--hhHHHHH----HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 34456677788887 42 3322222 2245578888889999999999999998 0000
Q ss_pred ------H----Hhhcccc---chhhhhhcccCCcchhhhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 036778 72 ------I----TFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFL-HNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 72 ------~----~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 122 (145)
. .++.+.+ .....|+.|..|++.|+++.++.... ..+|..+++.+.+++.+
T Consensus 299 ~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 299 FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 0 1222221 22346889999999999999998765 45788888888888876
No 190
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.80 E-value=0.0089 Score=48.17 Aligned_cols=102 Identities=9% Similarity=-0.026 Sum_probs=66.8
Q ss_pred hHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHH
Q 036778 15 YASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGY 70 (145)
Q Consensus 15 ~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~ 70 (145)
..|.+.++ +|. ++....++ .++..++.++|.++.+.+.+|+++++++ ...
T Consensus 240 LlPl~a~~~l~~--~a~~yGll----~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~ 313 (524)
T PF05977_consen 240 LLPLFARDVLGG--GASGYGLL----LAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIA 313 (524)
T ss_pred hhhHHHHHHhCC--cHHHHHHH----HHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 35667665 677 34444433 3477799999999999999999888776 111
Q ss_pred HHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 71 TITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 71 ~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+..+.+.. ....+..-+..|.+.|+|.+++..+....+..+++.+.+.+.+
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1222455678999999999999988777777777776666654
No 191
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.75 E-value=0.012 Score=45.00 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=58.0
Q ss_pred HHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------HHH------------
Q 036778 13 AYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------LGY------------ 70 (145)
Q Consensus 13 ~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------~~~------------ 70 (145)
..+.+.+.++ .|.+ .....+. .+.+.++.+++.++.+++.||.+|+... ...
T Consensus 227 ~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T PRK11652 227 EACSGVLMGAVLGLS--SMTVSIL----FILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVW 300 (394)
T ss_pred HHhChHHHHHHcCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 3344556665 6763 4333322 2244566677777777888887743333 000
Q ss_pred -----HHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 71 -----TITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 71 -----~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
....+.+. .+....+..|.+| +.+++..++......++..+++.+...+
T Consensus 301 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 301 TLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00001111 1334456678887 5789999999888888888888766554
No 192
>PRK11462 putative transporter; Provisional
Probab=96.73 E-value=0.01 Score=46.87 Aligned_cols=100 Identities=12% Similarity=-0.029 Sum_probs=60.4
Q ss_pred HHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH-------------------
Q 036778 12 IAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL------------------- 67 (145)
Q Consensus 12 ~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~------------------- 67 (145)
+..|...+..+ +|+ ++.....+.. +.-+.-.+.-++.|+++|| +||||.+
T Consensus 28 ~~~~l~~fyt~~~Gl--~~~~~g~i~~----~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p 101 (460)
T PRK11462 28 VMLYMMFFYTDIFGI--PAGFVGTMFL----VARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP 101 (460)
T ss_pred HHHHHHHHHHHhhCC--CHHHHHHHHH----HHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC
Confidence 33455555554 788 4544333332 4445566788889999997 5887766
Q ss_pred ---------------HHHHHHhhccccchhhhhhcccCC-cchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---------------LGYTITFSKGMVRLPNLIMFETFS-INIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 68 ---------------~~~~~~~~~~~~~~~~~~~~e~~p-~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
.++...+.... ....++.+|+.+ .+.|++..++-...+.+|..+.+.+.+
T Consensus 102 ~~s~~~~~~y~~~~~~~~~~~~t~~~-ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 102 DLSMNGKMIYAAITYTLLTLLYTVVN-IPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111 112367788876 777999999988888887766655543
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.73 E-value=0.0097 Score=45.95 Aligned_cols=41 Identities=5% Similarity=-0.019 Sum_probs=35.0
Q ss_pred hhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 82 PNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 82 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
...+..|..|++.|++..++.+....++..+++.+.+++.+
T Consensus 318 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 318 RETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred HHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 34677899999999999999999888888888888877765
No 194
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.69 E-value=0.0067 Score=47.06 Aligned_cols=71 Identities=17% Similarity=0.078 Sum_probs=47.9
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHH--HhhccccchhhhhhcccCCcchhh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTI--TFSKGMVRLPNLIMFETFSINIKG 96 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~--~~~~~~~~~~~~~~~e~~p~~~R~ 96 (145)
.-.....+++...+.++|++|||+.+ ..+.. .++.+..|..-++-.|..|+..|.
T Consensus 121 ~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~ 200 (528)
T KOG0253|consen 121 SVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRW 200 (528)
T ss_pred HHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCC
Confidence 55577888999999999999999998 22222 233333344445667999999998
Q ss_pred hHHHHHHHHHHHHHHHH
Q 036778 97 SAGSLVTFLHNNSNSLV 113 (145)
Q Consensus 97 ~~~~~~~~~~~~~~~~~ 113 (145)
.-+-+. ....+|....
T Consensus 201 ~~~V~~-~~waig~v~e 216 (528)
T KOG0253|consen 201 LLTVMS-FFWAIGQVFE 216 (528)
T ss_pred cchhHH-HHHHHHHHHH
Confidence 876665 4444444433
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.61 E-value=0.008 Score=52.30 Aligned_cols=105 Identities=4% Similarity=-0.126 Sum_probs=67.3
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------HHHHHH-------
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------LGYTIT------- 73 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------~~~~~~------- 73 (145)
.+..+.|.+.++ +|. +.....++.+ .+.++.+++.++.+++.||.++++.+ ......
T Consensus 243 ~~~~~~p~~~~~~~g~--~~~~~g~~~~----~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (1140)
T PRK06814 243 VVLSQLPLLAKETLGG--DENVATLFLA----VFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVP 316 (1140)
T ss_pred HHHHHhHHHHHHHcCC--chHHHHHHHH----HHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccc
Confidence 334466777765 677 3443443333 66788899999999999887766644 000000
Q ss_pred ---------------------------hhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 74 ---------------------------FSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 74 ---------------------------~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
++.+.+ +...+++.+..|.+.|++.+|+.+++..++..+++.+...+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 317 AEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred cccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 011100 123467789999999999999999888887777766655543
No 196
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=96.56 E-value=0.03 Score=43.14 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=61.3
Q ss_pred HhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------HHH
Q 036778 14 YYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------LGY 70 (145)
Q Consensus 14 ~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------~~~ 70 (145)
+..|.+.++ +|. ++.+..... +...++.+++++..+++.||.++|+.+ ...
T Consensus 226 ~~~~~~~~~~lg~--s~~~~G~~~----~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK11195 226 FLVLAWAPVALGI--TLNQPAYLQ----AVVAIGIAVGAGAAARLVTLETVLRVLPAGILMGLVVLLMALQHSLLPAYPL 299 (393)
T ss_pred HHHHHHHHHHcCC--ChhHHHHHH----HHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 344445554 677 444433333 366688899999999999999888755 000
Q ss_pred HHHhhcccc---chhhhhhcccCCcch-hhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 71 TITFSKGMV---RLPNLIMFETFSINI-KGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 71 ~~~~~~~~~---~~~~~~~~e~~p~~~-R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
.+..+.+.+ +.......|.-|.+. |+++.++.+....++..++..+...+.
T Consensus 300 ~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 300 LILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 111111111 222345556655554 799999999888888777766655443
No 197
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.56 E-value=0.018 Score=45.48 Aligned_cols=81 Identities=15% Similarity=0.197 Sum_probs=50.7
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH--------HHHH-H-------------------hhcc---ccchhhhhhcccC
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL--------GYTI-T-------------------FSKG---MVRLPNLIMFETF 90 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~--------~~~~-~-------------------~~~~---~~~~~~~~~~e~~ 90 (145)
...+..+++.++.+++.||+|+|+.+. .... . .+.+ .....+++.+|..
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 444777888899999999999999870 0000 0 0000 1133456678884
Q ss_pred C-----cchh--hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 91 S-----INIK--GSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 91 p-----~~~R--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+ +..| +...++......++..+++.+..++.+
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4444 445566666777888888887777665
No 198
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.54 E-value=0.029 Score=43.11 Aligned_cols=45 Identities=9% Similarity=-0.151 Sum_probs=29.2
Q ss_pred HHHHhhhCCCCCcchhhhheehhhhhh-hhhhhhHHHHHHHHHhhhCChHHH
Q 036778 17 SSIFDVASNKLSTKFGNFRISILRHIQ-SLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 17 ~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
+.+.++.|.+ +........ .. .++.+++.++++++.||+|||+.+
T Consensus 234 ~~l~~~~G~~--~~~~g~~~~----~~~~~~~i~g~~~~g~l~~r~g~~~~l 279 (402)
T PRK11902 234 TFLIRGAGFS--AGEVGIVNK----TLGLAATIVGALAGGTLMVRLGLYRSL 279 (402)
T ss_pred HHHHHhcCCC--HHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4444557774 443333322 11 235778899999999999998876
No 199
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.44 E-value=0.0018 Score=50.21 Aligned_cols=86 Identities=14% Similarity=0.023 Sum_probs=63.9
Q ss_pred ehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------HHHHHHhhcccc---chhhhhhcccC
Q 036778 37 SILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------------------LGYTITFSKGMV---RLPNLIMFETF 90 (145)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------------------~~~~~~~~~~~~---~~~~~~~~e~~ 90 (145)
+++-+...+.+++..++.|.+.||+|+|-.+ ++.+...+.+.. ....+++++.|
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f 188 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVF 188 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHc
Confidence 4455589999999999999999999999888 111122222221 23456888999
Q ss_pred Ccch-hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 91 SINI-KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 91 p~~~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
|.+. |++++|.......+|-.+++.+...+++
T Consensus 189 ~~d~er~~vmGialgfislG~lvgPpfGGilYe 221 (464)
T KOG3764|consen 189 PEDNERGSVMGIALGFISLGVLVGPPFGGILYE 221 (464)
T ss_pred ccchhhhHHHHHHHHHHhccceecCCcccchHh
Confidence 9988 7999999998888888777777666665
No 200
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.38 E-value=0.087 Score=35.74 Aligned_cols=112 Identities=9% Similarity=-0.002 Sum_probs=66.1
Q ss_pred hhhhhchHHHHHhHHHHHhhhCCCC----CcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------
Q 036778 3 MQTLGGSTAIAYYASSIFDVASNKL----STKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------- 67 (145)
Q Consensus 3 ~~~~~g~~~~~~~~~~i~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------- 67 (145)
+..+++.++..+...++.+..+.+. +...-.. ..++.+....+.+++...+++++|.|+.+
T Consensus 6 ~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~----slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~ 81 (156)
T PF05978_consen 6 MFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYY----SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI 81 (156)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHH----HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4455666666666666666544430 1111111 12244466777888889999999999998
Q ss_pred ---------H--HHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 ---------L--GYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 68 ---------~--~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
. ......+.+.+ ...-.|+.+...++.|++..++...+...+.++++...-
T Consensus 82 ~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 82 ASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00011111111 222357778888888999988887777776666555443
No 201
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.34 E-value=0.036 Score=42.70 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=76.6
Q ss_pred hhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-CChHHH---------------
Q 036778 4 QTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-GRRPLL--------------- 67 (145)
Q Consensus 4 ~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-grr~~~--------------- 67 (145)
.|....+.+..+.|.++.+-|. +......+.+ ...+++.+.++...++++|. ++|+..
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~--sa~~aG~lls----l~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGL--SAAEAGSLLS----LMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCC--CHHHhhhHHH----HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 3555677778899999999999 5665555555 77799999999999999976 455544
Q ss_pred -------HHHHHHhhcccc---chhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -------LGYTITFSKGMV---RLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -------~~~~~~~~~~~~---~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+.++.+.+ +...+++..-. .++.-++-.++.+.++.+-+..+|.+++++++
T Consensus 293 ~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD 358 (395)
T COG2807 293 LAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD 358 (395)
T ss_pred HhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH
Confidence 122222333322 33334444433 44456667777888888888889999988876
No 202
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.31 E-value=0.018 Score=45.78 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=56.7
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH-------------HHHHH-------Hhhcc---ccchhhhhhcccCCcchhhhHHHH
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL-------------LGYTI-------TFSKG---MVRLPNLIMFETFSINIKGSAGSL 101 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~-------------~~~~~-------~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~ 101 (145)
+..++.++.-|.++||.|||..+ ..+.. ....+ ......+|++++...+.|...+++
T Consensus 73 ~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gl 152 (463)
T KOG2816|consen 73 LLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFLLLGLSGGFSAIFSVGFAYVADISSEEERSSSIGL 152 (463)
T ss_pred HHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhhhcccccchhhhhhhhhhheeeccchhHHHHHHHH
Confidence 56777888899999999999998 11111 00111 113456899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 036778 102 VTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.....+.+..+++.+..+...
T Consensus 153 l~~~~~~~~~~~p~~~~~~~~ 173 (463)
T KOG2816|consen 153 LSGTFGAGLVIGPALGGYLVK 173 (463)
T ss_pred HHHHHHHHHhHHHHHHHHHHH
Confidence 998777777777777666654
No 203
>PRK10054 putative transporter; Provisional
Probab=95.94 E-value=0.027 Score=43.40 Aligned_cols=79 Identities=14% Similarity=0.068 Sum_probs=50.1
Q ss_pred hhhhhhhHHHHHHHHHhhhCChHHHH-------H----H-------------HHHhhccc---cchhhhhhcccCCcchh
Q 036778 43 QSLFQVPVVGSSVLLADKFGRRPLLL-------G----Y-------------TITFSKGM---VRLPNLIMFETFSINIK 95 (145)
Q Consensus 43 ~~~~~~~~~~~~~~l~Dr~grr~~~~-------~----~-------------~~~~~~~~---~~~~~~~~~e~~p~~~R 95 (145)
..+......+..+.+.||.++|+.+. . + ...++.+. .|....++.+..|++.|
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~ 332 (395)
T PRK10054 253 NAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMK 332 (395)
T ss_pred hhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccc
Confidence 33555556677889999999998760 0 0 00001111 12333456688899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 96 GSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
++..+... ..++|..+++....++.+
T Consensus 333 ~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 333 ASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred eehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 99888644 566788888888777765
No 204
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=95.76 E-value=0.036 Score=43.18 Aligned_cols=59 Identities=14% Similarity=0.047 Sum_probs=43.6
Q ss_pred hhhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHH
Q 036778 2 LMQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPL 66 (145)
Q Consensus 2 ~~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~ 66 (145)
.|.+....-....|.|.++++.|+ ++.+...+.+ ...+..+++.++.|+++||.++++.
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a----~~~~~~i~~~~~~g~~aDr~~~~~~ 69 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLA----VGPLARIVSPPFWGAIADRFGSAKR 69 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHhHhhhHHH
Confidence 345555556666788999999998 5555554444 7788999999999999999865443
No 205
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.73 E-value=0.074 Score=40.75 Aligned_cols=34 Identities=24% Similarity=0.193 Sum_probs=25.2
Q ss_pred hhhhhhHHHHHHHHHhhhCChHHHHHHHHHhhcc
Q 036778 44 SLFQVPVVGSSVLLADKFGRRPLLLGYTITFSKG 77 (145)
Q Consensus 44 ~~~~~~~~~~~~~l~Dr~grr~~~~~~~~~~~~~ 77 (145)
.+..++...+.|.++||+|||+.-.++...++..
T Consensus 79 f~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~s 112 (354)
T PF05631_consen 79 FASSAIFGTFVGSLADRYGRKKACLLFCILYSLS 112 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 3555666678889999999999876666666554
No 206
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.60 E-value=0.1 Score=41.62 Aligned_cols=78 Identities=17% Similarity=0.090 Sum_probs=53.9
Q ss_pred hhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------------H-HH---HHHhhccccchhhhhhcc
Q 036778 39 LRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------------L-GY---TITFSKGMVRLPNLIMFE 88 (145)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~-~~---~~~~~~~~~~~~~~~~~e 88 (145)
.+++..+...+..++.|-++|+.++||.+ . ++ ...+..+ .....++.+|
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~-~vfyna~LP~ 153 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS-NVFYNAYLPD 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH-HHHHHHHhHh
Confidence 44577788888999999999999998887 0 00 0011111 1233478889
Q ss_pred cCCcchh--------------------------hhHHHHHHHHHHHHHHHHHHHH
Q 036778 89 TFSINIK--------------------------GSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 89 ~~p~~~R--------------------------~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
+.+.+.+ ++..+.....+.+|+.+.-.+.
T Consensus 154 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~ 208 (477)
T PF11700_consen 154 LARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLIS 208 (477)
T ss_pred hcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHH
Confidence 8888887 8888888888888876655444
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=95.60 E-value=0.02 Score=46.05 Aligned_cols=110 Identities=18% Similarity=0.144 Sum_probs=74.6
Q ss_pred hchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 7 GGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
.|.+.-..|+|.+.++.+++ ......+.+ +..+...++-++.|+++|+...|+..
T Consensus 312 ~g~~~p~~~l~~~~~~~g~~--~~~aa~l~S----iigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAKSLGLS--SNDAAFLLS----IIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHHHHHHHHhhcCCC--hhhhHHHHH----HHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 45555566777778888885 433333333 55599999999999999999854444
Q ss_pred ------HHHHHHhhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ------LGYTITFSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ------~~~~~~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..+...++...+ ........|+.+.+.-..+.|+...+..++..+++.+..++.+
T Consensus 386 ~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d 449 (509)
T KOG2504|consen 386 TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYD 449 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeee
Confidence 111222222222 3344577899999999999999998888888888777765544
No 208
>PRK09848 glucuronide transporter; Provisional
Probab=95.55 E-value=0.098 Score=40.86 Aligned_cols=48 Identities=10% Similarity=0.056 Sum_probs=32.2
Q ss_pred HhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh----CChHHH
Q 036778 14 YYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF----GRRPLL 67 (145)
Q Consensus 14 ~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~----grr~~~ 67 (145)
.|.+.++++ .|. ++.....+. ++..+...+..++.|+++||. ||||.+
T Consensus 29 ~~l~~y~~~~~gl--~~~~~g~~~----~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~ 81 (448)
T PRK09848 29 LFLLSYYTDVAGV--GAAAAGTML----LLVRVFDAFADVFAGRVVDSVNTRWGKFRPF 81 (448)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHH----HHHHHHHHHhhhhheeeeecCCCCCcCchHH
Confidence 344455554 688 454444333 366788888999999999997 666643
No 209
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=95.49 E-value=0.12 Score=41.09 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=51.4
Q ss_pred hhhhhhhHHHHHHHHHhhhCChHHH-------------------------HHHHHH--hh-ccccchhhhhhcccC----
Q 036778 43 QSLFQVPVVGSSVLLADKFGRRPLL-------------------------LGYTIT--FS-KGMVRLPNLIMFETF---- 90 (145)
Q Consensus 43 ~~~~~~~~~~~~~~l~Dr~grr~~~-------------------------~~~~~~--~~-~~~~~~~~~~~~e~~---- 90 (145)
.....+.+.++...+++|+|+|+++ ++.... .+ ....+++|+..+|+-
T Consensus 281 ~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge 360 (467)
T COG2211 281 SGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGE 360 (467)
T ss_pred HHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHH
Confidence 3355566688889999999999998 111111 11 122367888888764
Q ss_pred -CcchhhhH--HHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 91 -SINIKGSA--GSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 91 -p~~~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
-+..|..| .+.......++..++..+.++...
T Consensus 361 ~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 361 WKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444 445556677888888888777766
No 210
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=95.42 E-value=0.11 Score=40.74 Aligned_cols=51 Identities=20% Similarity=0.111 Sum_probs=35.0
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
....|.|.++++ .|+ ++.+..++.+ +..+..++.+++.|.+.||.|.||-+
T Consensus 25 i~~pF~~iWL~~~~GL--s~~~iG~i~s----~~~~~~l~~qp~~G~i~Dklg~kK~L 76 (412)
T PF01306_consen 25 IFLPFFPIWLTQVAGL--SGTEIGIIFS----AGSLFALLAQPVYGFISDKLGLKKHL 76 (412)
T ss_dssp HHHHHHHHHHHHHH-----HHHHHHHHH----HHHHHHHHTHHHHHHHHHHCTTCSHH
T ss_pred HHHHHHHHHHccccCC--CHHHHHHHHH----HHHHHHHHHHHhHHHhcchhhhhHHH
Confidence 334466777875 899 5666555555 67788889999999999999955543
No 211
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.21 E-value=0.12 Score=41.01 Aligned_cols=80 Identities=15% Similarity=0.109 Sum_probs=58.2
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH----HHHHHh---------------------------------hccccchhhh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL----GYTITF---------------------------------SKGMVRLPNL 84 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~----~~~~~~---------------------------------~~~~~~~~~~ 84 (145)
...++.+++....+.+.+|++.|+++. +..... +....+ ...
T Consensus 296 ~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~-~~~ 374 (468)
T TIGR00788 296 VGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMP-FLV 374 (468)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHcc-HHH
Confidence 455888888899999999999999871 111100 000001 146
Q ss_pred hhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 85 IMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 85 ~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+..|++.+++..++...+.+++..+++.+..++.+
T Consensus 375 ~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 375 LLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred HHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999998877766665
No 212
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.15 E-value=0.047 Score=43.76 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=38.6
Q ss_pred chHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH
Q 036778 8 GSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~ 67 (145)
-.+.+.++.|.++++ .|. +......+.. .+.++.+++.+++++++|| ..+|..+
T Consensus 288 v~~~~~~~lpl~l~~~~~~--s~~~a~~ls~----~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~ 346 (495)
T KOG2533|consen 288 VNYGFSYWLPLYLKSNGGY--SELQANLLST----PYDVGGIVGLILAGYLSDRLKTIFARRLLF 346 (495)
T ss_pred ccccHHHHHHHHHHcCCCc--ChHHhccccc----hHHhhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 446788899999998 345 3433333322 6669999999999999999 5566555
No 213
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.97 E-value=0.043 Score=43.34 Aligned_cols=84 Identities=21% Similarity=0.160 Sum_probs=57.8
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------------HH--HH-HHhhc------cccchhh
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------------LG--YT-ITFSK------GMVRLPN 83 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------------~~--~~-~~~~~------~~~~~~~ 83 (145)
+++.+|.++.++..+.+.|+.||+|-|... +. .. ...+. ....++.
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPs 162 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPS 162 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcccc
Confidence 556688899999999999999999998887 00 00 00000 0011222
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
-...-.||.+.|+++..+..+.+-+|.+++..+-|.+.
T Consensus 163 kiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 163 KIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred HHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceec
Confidence 23344799999999999999888888877776655554
No 214
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=94.65 E-value=0.18 Score=40.13 Aligned_cols=106 Identities=11% Similarity=0.076 Sum_probs=67.2
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH-----------------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL----------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~----------------- 67 (145)
..+..|+..+..+ .|+ ++.....+.. +-=+.-.+.-++.|.++|| +||||-+
T Consensus 29 ~~~~~yLl~fYTdv~Gi--s~~~aG~ifl----v~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~ 102 (467)
T COG2211 29 GIVVLYLLFFYTDVFGL--SAALAGTIFL----VARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFI 102 (467)
T ss_pred HHHHHHHHHHHhcccCC--cHHHHHHHHH----HHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHc
Confidence 4455667777766 788 4543333322 2224445667888999996 4666665
Q ss_pred -----------------HHHHHHhhccccchhhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 -----------------LGYTITFSKGMVRLPNLIMFETF-SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 -----------------~~~~~~~~~~~~~~~~~~~~e~~-p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.++..+|...-.|. .++.+|+- .++.|.+..+.-.....+++.+.....+++..
T Consensus 103 ~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy-~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 103 TPDFSMTGKLIYALVTYMLLGLGYTLVNIPY-GALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred CCCcccCcchHHHHHHHHHHHHHHHheeCch-hhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222221222 36777875 55679999999999999999999988877765
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=94.58 E-value=0.29 Score=38.39 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=63.7
Q ss_pred HHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH------HHH-----------------
Q 036778 16 ASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG------YTI----------------- 72 (145)
Q Consensus 16 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~------~~~----------------- 72 (145)
.|.+.+..-- +....+-..+.+++...+...+...+..++.+|+|-|+.+.+ .+.
T Consensus 243 f~~y~~~~f~--~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~kl 320 (412)
T PF01306_consen 243 FPIYFASFFQ--SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKL 320 (412)
T ss_dssp HHHHHHHTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHH
T ss_pred HHHHHHHHhc--ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHH
Confidence 3444544333 233333344555667778999999999999999999998811 110
Q ss_pred Hhhcccc---chhhhhhcccCCcchhhhHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 036778 73 TFSKGMV---RLPNLIMFETFSINIKGSAGSLVT-FLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 73 ~~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 122 (145)
.++.... ....-|+++.+|++..++...+.. ....++..+.+...+++.+
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd 374 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD 374 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh
Confidence 0110000 112358999999999999888864 4455666666666666654
No 216
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.08 E-value=0.63 Score=38.77 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=59.3
Q ss_pred HHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-CChHHHH-----------------------------
Q 036778 19 IFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-GRRPLLL----------------------------- 68 (145)
Q Consensus 19 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-grr~~~~----------------------------- 68 (145)
+.+.+|.+ ......+.. .+....-+...++++++|+. ||++.+.
T Consensus 14 l~~~lg~~--~~~A~~i~~----~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 14 FLNFLGFS--ESTSTVLFH----TFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHcCCc--HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 34457774 333333323 33344445667888999974 8888870
Q ss_pred --HHHHHhhcccc---chhhhhhcccCCcc---hhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 69 --GYTITFSKGMV---RLPNLIMFETFSIN---IKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 69 --~~~~~~~~~~~---~~~~~~~~e~~p~~---~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
..+...+.|.+ +..-+...|.++.+ .|.+...+.++..++|+++++.+.+++.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111222 33446777888643 4778888888999999999988888876
No 217
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=93.59 E-value=0.48 Score=37.06 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=32.5
Q ss_pred hhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 82 PNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 82 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
..++.+|..|++.|++..++...+--+|..+.+.+...+.
T Consensus 110 ~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 110 FLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred HHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3478899999999999999999887777777776665544
No 218
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=93.55 E-value=0.72 Score=35.79 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=17.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 94 IKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 94 ~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.++++.++.......+...++....++
T Consensus 344 ~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 344 PKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367777777776666666655555544
No 219
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=93.35 E-value=0.76 Score=35.66 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=68.5
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------HHHHH
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------LGYTI 72 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------~~~~~ 72 (145)
....+.+-+++|.+ .. ..+++++.+.++..+.+++..++..|+|.++.+ .++..
T Consensus 32 gPLL~~Ir~~~gls--~s----~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~g 105 (395)
T COG2807 32 GPLLDEIRQDLGLS--FS----VAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLG 105 (395)
T ss_pred hhhHHHHHHHhccc--HH----HHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 33455556667773 33 334556689999999999999999999988887 11111
Q ss_pred H--hhcccc---chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 73 T--FSKGMV---RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 73 ~--~~~~~~---~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
. .+.+.+ ...+..+-|-||.+. +..++++.+.-.+++.+++...+.+.+
T Consensus 106 t~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~ 159 (395)
T COG2807 106 TLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQ 159 (395)
T ss_pred HHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHH
Confidence 1 111111 233467778888654 566777777777888888888877765
No 220
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.16 E-value=0.6 Score=32.91 Aligned_cols=75 Identities=21% Similarity=0.131 Sum_probs=46.6
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHH--H-----------------------HHHHhhccc---cchhhhhhcccCCc-
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLL--G-----------------------YTITFSKGM---VRLPNLIMFETFSI- 92 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~--~-----------------------~~~~~~~~~---~~~~~~~~~e~~p~- 92 (145)
.+.+...++.+..|.+.||.|||+.+. . .....+.+. .+....+.+|.+|.
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T COG0477 47 AFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEA 126 (338)
T ss_pred HHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCch
Confidence 556777777799999999999997660 0 000011111 14455788899887
Q ss_pred chhhhHHHHHHH-HHHHHHHHHHHH
Q 036778 93 NIKGSAGSLVTF-LHNNSNSLVAYA 116 (145)
Q Consensus 93 ~~R~~~~~~~~~-~~~~~~~~~~~~ 116 (145)
+.|+...+.... ....+..+++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (338)
T COG0477 127 TERGLAVGLVTLGAGALGLALGPLL 151 (338)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777666 344555555433
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=91.20 E-value=0.44 Score=37.30 Aligned_cols=103 Identities=9% Similarity=0.008 Sum_probs=61.8
Q ss_pred HHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------------------
Q 036778 12 IAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL----------------------- 67 (145)
Q Consensus 12 ~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~----------------------- 67 (145)
+..+.+.++.+ .|. +........ +.+|++.++|-+++.++..|+...|.+
T Consensus 255 ~gsfl~~y~~~~~g~--~~~~aa~~~----s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~ 328 (422)
T COG0738 255 IGSFLVSYLEELLGL--NEQQAAYYL----SFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL 328 (422)
T ss_pred HHHHHHHHHHhcCCc--cHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 34456677766 555 344443333 388899999999999999999988887
Q ss_pred --HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
......+.....|..+....+.+|.+ -. ..|....+..+|+.+.|.+.+++.+
T Consensus 329 ~~l~~ig~F~simfPTIfslal~~l~~~-ts-~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 329 YALFLIGLFNSIMFPTIFSLALKNLGEH-TS-VGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCcc-cc-ccceeeeeheecchHHHHHHHHHHH
Confidence 11111112222355566677777732 22 2233333456677777777666654
No 222
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=91.06 E-value=0.93 Score=27.53 Aligned_cols=51 Identities=16% Similarity=-0.076 Sum_probs=37.7
Q ss_pred HHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 11 AIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 11 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
..+...|.+.++.+. +.....++.+ ..+++.++|.+....+.++.++|+.+
T Consensus 10 ayTplLP~M~~~~~l--s~~~ag~las----aNy~GYL~GAl~~~~~~~~~~~~~~~ 60 (85)
T PF06779_consen 10 AYTPLLPLMQADGGL--SLSQAGWLAS----ANYLGYLVGALLASRLPRHSRPRRLL 60 (85)
T ss_pred HHHhHhHHHHHhcCC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 344467888888888 4555555444 77899999999999988887666665
No 223
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=90.76 E-value=0.96 Score=35.91 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=19.9
Q ss_pred hhhcccCCcchhhhHH---HHHHHHHHHHHHHHHHHHHHHhh
Q 036778 84 LIMFETFSINIKGSAG---SLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+..|..+ +.+..+. +.......+|..+++.+..++.+
T Consensus 143 a~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 143 SLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 57778887 4444332 23332233566666666555544
No 224
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.55 E-value=1.6 Score=34.96 Aligned_cols=41 Identities=10% Similarity=-0.070 Sum_probs=36.6
Q ss_pred hhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 81 LPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 81 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+.|.+..|++..+.-.|-+++....+++|..+++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999888877665
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=88.66 E-value=0.85 Score=36.42 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=26.5
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
-+..|+.|++.|.+++++...+..+ |.+..|++...+.+
T Consensus 372 ~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 372 PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 3567889999999999998765544 34444445555543
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=88.46 E-value=0.41 Score=38.94 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=38.7
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
..+....+++.+++|+ ++.+...+.+ .-=++.+++.+++|.++||+.+||.+
T Consensus 28 g~l~pll~vy~kQLGl--~p~~~Gtl~g----~~P~v~~L~~P~~g~~Adr~r~~r~l 79 (618)
T KOG3762|consen 28 GSLFPLLAVYFKQLGL--NPAVVGTLTG----TLPLVEFLAAPLWGFLADRYRKRRPL 79 (618)
T ss_pred cccchHHHHHHHHcCC--CHHHhhhhhh----HHHHHHHHhHHHHHHHHHHHHhcCch
Confidence 3445577889999999 4555554444 44477888999999999999876665
No 227
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=88.33 E-value=1.5 Score=35.23 Aligned_cols=83 Identities=13% Similarity=-0.019 Sum_probs=56.2
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhC--ChHHH---------------------------HHHHHHhhcccc--chhhhhh
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFG--RRPLL---------------------------LGYTITFSKGMV--RLPNLIM 86 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~g--rr~~~---------------------------~~~~~~~~~~~~--~~~~~~~ 86 (145)
++.+...++..+.++..++...|.+ ||+++ +..+++.+.+.+ ...-.|+
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~ 154 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYI 154 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHH
Confidence 3344677889999999999999988 77776 233334444433 3345688
Q ss_pred cccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 87 FETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 87 ~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
+.-.-.+.|.++++......-++.+++|.+-+.+
T Consensus 155 a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 155 ADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 8877788888888887765556666665554444
No 228
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=86.15 E-value=0.71 Score=38.23 Aligned_cols=53 Identities=13% Similarity=0.002 Sum_probs=35.9
Q ss_pred hhchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhh-hhhhHHHHHHHHHhhhCCh
Q 036778 6 LGGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSL-FQVPVVGSSVLLADKFGRR 64 (145)
Q Consensus 6 ~~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~Dr~grr 64 (145)
..+......|.|.++++ +|. ++.....+.+ ...+ +.+++.+++|+++||++++
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~--s~~~ag~l~~----~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGI--SSAEANFLIG----VVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--cHHHHHHHhh----hhhhhHHHHHHhhhhheeeeeccc
Confidence 34556677788999875 787 4554444333 2223 4578899999999999844
No 229
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=85.68 E-value=3.1 Score=33.38 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=27.9
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~ 117 (145)
|....++.+..|++.|++.+|+......+++.++..+.
T Consensus 401 p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 401 GLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456778889999999999988765556666655554
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=85.09 E-value=6.3 Score=31.66 Aligned_cols=40 Identities=10% Similarity=-0.063 Sum_probs=26.0
Q ss_pred chhhhhhcccCCcchh--hhHHHHHHHHHHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIK--GSAGSLVTFLHNNSNSLVAYAFNF 119 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R--~~~~~~~~~~~~~~~~~~~~~~~~ 119 (145)
.+|++++++..|.+.| |..+|+-+.+--+...+.+...+.
T Consensus 399 siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~ 440 (477)
T TIGR01301 399 SIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP 440 (477)
T ss_pred HHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 5677888888885444 677777766666666665554444
No 231
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=84.73 E-value=5.3 Score=31.98 Aligned_cols=37 Identities=11% Similarity=0.086 Sum_probs=29.5
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.++.+..|++.++.++|+......+|+.++..+....
T Consensus 402 ~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 402 AMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556788999999999999988888888877765433
No 232
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=84.48 E-value=14 Score=30.74 Aligned_cols=80 Identities=13% Similarity=-0.010 Sum_probs=51.9
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH--------------------------HHHHHHhhcccc---chhhhhhcccCCc
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL--------------------------LGYTITFSKGMV---RLPNLIMFETFSI 92 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------------~~~~~~~~~~~~---~~~~~~~~e~~p~ 92 (145)
...++..++.++.+.+..+++|-|.. ..+....+.+.+ ........-..|.
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~ 436 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPD 436 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCc
Confidence 44577788888889999998877766 111111111111 1122333345688
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 93 NIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 93 ~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+.-+++.++...+..+|+.++.-++.-+.
T Consensus 437 ~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 437 EDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 88999999999999998888877765444
No 233
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=80.12 E-value=3.9 Score=32.83 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=34.2
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh----hCChHHH
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK----FGRRPLL 67 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~grr~~~ 67 (145)
..|.|-+++.+|.+ .++.+++.. +-=+..++.+++.|..+|| +||||-+
T Consensus 52 lsy~tPyl~~lGvp--hk~~S~iw~----~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf 104 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVP--HKWSSIIWL----CGPLSGLLVQPLVGSASDRCTSRYGRRRPF 104 (498)
T ss_pred hccccHHHHHcCCC--ccccccccc----ccccccceecccccccccccccccccccch
Confidence 34677788889994 555544433 2235567788889999995 7999987
No 234
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=79.36 E-value=6.8 Score=31.64 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=28.7
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHH-HHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLH-NNSNSLVAYAFN 118 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~-~~~~~~~~~~~~ 118 (145)
|+..+.++++.|.+.|++.+|...... .+++.++..+..
T Consensus 396 Pvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 396 PVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred hHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666788999999999999999986533 455555554443
No 235
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.34 E-value=8.8 Score=30.78 Aligned_cols=76 Identities=11% Similarity=-0.045 Sum_probs=53.2
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH--------------------HHH--HHHhhcccc---chhhhhhcccCCcchhh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL--------------------LGY--TITFSKGMV---RLPNLIMFETFSINIKG 96 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------~~~--~~~~~~~~~---~~~~~~~~e~~p~~~R~ 96 (145)
+-+....+.+++++.++|++|.|..+ +.+ ....+.|.+ ...-.|.+|-.+.+.+.
T Consensus 58 iiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie 137 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIE 137 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHH
Confidence 44477788889999999999999998 000 011111111 12235889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 036778 97 SAGSLVTFLHNNSNSLVAYAF 117 (145)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ 117 (145)
+..++...+...+.++++...
T Consensus 138 ~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 138 RNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHHHHHHHHHHHHHHhhhHhh
Confidence 999999888888877776554
No 236
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=79.27 E-value=14 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=33.6
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
...+|+-|+..-++.+++...+.+++..++..+...+.+
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999998888877766655
No 237
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=79.26 E-value=13 Score=29.67 Aligned_cols=41 Identities=12% Similarity=-0.012 Sum_probs=33.4
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
|....+.+|..|.+.|++.+|+......+|..+++.+....
T Consensus 400 p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 400 PLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556788999999999999999988888888877766544
No 238
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=79.09 E-value=13 Score=27.65 Aligned_cols=21 Identities=29% Similarity=0.615 Sum_probs=14.3
Q ss_pred ccCCCCCC-CCHHHHHHHHhhc
Q 036778 123 WSTIETKG-RTLEEIQRSIIKF 143 (145)
Q Consensus 123 ~~~pet~~-~~l~~i~~~~~~~ 143 (145)
|..+|+++ ..+||.++..+++
T Consensus 152 ~~~~~~~~~eE~eEVe~el~~~ 173 (294)
T KOG2881|consen 152 WEMSPSEGQEELEEVEAELAKR 173 (294)
T ss_pred hcCCCccchhhHHHHHHHHHhc
Confidence 77777766 4577777776654
No 239
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=78.56 E-value=5.2 Score=33.88 Aligned_cols=40 Identities=18% Similarity=0.058 Sum_probs=31.3
Q ss_pred hhhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 83 NLIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 83 ~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
..++-...|.+.|+.++|+..+.-++ |.+.+|.+++++++
T Consensus 608 ~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 608 MLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred eEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 45666788999999999998876665 45558888888876
No 240
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=78.42 E-value=7 Score=32.17 Aligned_cols=63 Identities=13% Similarity=0.006 Sum_probs=44.8
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCChHHH---------------------------HHHHHHhhccccchhhhhhcccCCcc
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRRPLL---------------------------LGYTITFSKGMVRLPNLIMFETFSIN 93 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------------~~~~~~~~~~~~~~~~~~~~e~~p~~ 93 (145)
+.-..+.++.-++.+++++|+||-+++ .+-.+.++..+.++ -+|++...|++
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~-~sY~s~vaPp~ 491 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI-ISYASHVAPPG 491 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH-HHHHHhhCCCc
Confidence 344466777888889999999999988 11122222222233 37899999999
Q ss_pred hhhhHHHHHHH
Q 036778 94 IKGSAGSLVTF 104 (145)
Q Consensus 94 ~R~~~~~~~~~ 104 (145)
.|+++.++...
T Consensus 492 l~at~Q~l~~g 502 (618)
T KOG3762|consen 492 LRATAQGLLQG 502 (618)
T ss_pred chHHHHHHHHH
Confidence 99999999764
No 241
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=78.00 E-value=5.8 Score=31.47 Aligned_cols=29 Identities=21% Similarity=0.110 Sum_probs=23.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 39 LRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
..++..+...+-+++-|-++|+.|+||-+
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~ 91 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKF 91 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchH
Confidence 34466677888888999999999987776
No 242
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=75.55 E-value=0.9 Score=36.96 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 84 LIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 84 ~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
..+-...|.+.|+.+.|+...+.++ |.+.+|.+++.+++
T Consensus 474 ~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 474 LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp ----------------------------------------
T ss_pred eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 3444678899999999998876664 55568888887776
No 243
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=74.70 E-value=17 Score=29.45 Aligned_cols=42 Identities=10% Similarity=-0.122 Sum_probs=36.9
Q ss_pred hhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 81 LPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 81 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.-|.+..|+.+.+.--|-+++....++++..+++....++..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999988888776655
No 244
>PTZ00207 hypothetical protein; Provisional
Probab=71.69 E-value=11 Score=31.23 Aligned_cols=101 Identities=8% Similarity=-0.044 Sum_probs=54.2
Q ss_pred hchHHHHHhHHHHHhhh-CCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChH----HH--------------
Q 036778 7 GGSTAIAYYASSIFDVA-SNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRP----LL-------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~----~~-------------- 67 (145)
..-.++.+.+..|.+.+ |.+.+........+ ...+.+.+|-+..|++....-||+ .-
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vs----L~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~ 442 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTV----LNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIIT 442 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehh----hhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHH
Confidence 33345555677788887 66323311111122 344788888888887764444333 11
Q ss_pred -----------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHH
Q 036778 68 -----------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLV 113 (145)
Q Consensus 68 -----------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~ 113 (145)
.+..++++.. .++....++|+|. +.=++-+-+.....-+|..+.
T Consensus 443 ~lll~~~~p~~~L~~~~~lvg~~~G~~-~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~ 503 (591)
T PTZ00207 443 MLTLFLTLPKAALPLPYFIAAFANGFM-AATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFL 503 (591)
T ss_pred HHHHHHHCCccHhHHHHHHHHHHhhHh-HHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHH
Confidence 0111111111 1445578899999 777776666665555555554
No 245
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=69.57 E-value=11 Score=28.07 Aligned_cols=42 Identities=12% Similarity=-0.039 Sum_probs=35.3
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+....|++++-|.+.+++.+++.+.++.+|..++|.+...+.
T Consensus 29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 445578888989999999999999999999999888887554
No 246
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.57 E-value=12 Score=23.75 Aligned_cols=23 Identities=30% Similarity=0.312 Sum_probs=15.8
Q ss_pred hhhhhHHHHHHHHHhhh-CChHHH
Q 036778 45 LFQVPVVGSSVLLADKF-GRRPLL 67 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~-grr~~~ 67 (145)
+..++.....||+.||+ |.+++.
T Consensus 53 IsGilVGa~iG~llD~~agTsPwg 76 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWG 76 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHH
Confidence 44555566788999998 555554
No 247
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=59.99 E-value=32 Score=27.77 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=46.8
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH-------------------------------HHHHHHhhccccchhhhhhcccCCcc
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL-------------------------------LGYTITFSKGMVRLPNLIMFETFSIN 93 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~-------------------------------~~~~~~~~~~~~~~~~~~~~e~~p~~ 93 (145)
+++++++.+.|.++||.+.-|.. ......+..+.-|+..-+..|.-=+.
T Consensus 312 v~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv 391 (480)
T KOG2563|consen 312 VAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPV 391 (480)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecccc
Confidence 77899999999999999766653 11111222333355556677764334
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 94 IKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 94 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.-++..|+.+..+.+-+.+.........+
T Consensus 392 ~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 392 AEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred CCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 44556677666666655555555544443
No 248
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=55.96 E-value=49 Score=26.35 Aligned_cols=43 Identities=9% Similarity=0.189 Sum_probs=36.9
Q ss_pred hhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 036778 83 NLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEWST 125 (145)
Q Consensus 83 ~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (145)
..+....-|...|+...|+....+.++=+++|.+.+.+..|..
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 4667778899999999999999999999999998877777764
No 249
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=54.31 E-value=64 Score=25.43 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=26.5
Q ss_pred hhhcccC---CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 84 LIMFETF---SINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 84 ~~~~e~~---p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+|.. |.+ |+.-.+.+.....+|+.++..+.+++..
T Consensus 109 a~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~ 149 (433)
T PF03092_consen 109 ALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLD 149 (433)
T ss_pred HHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3555654 444 7788888888888888888777766554
No 250
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=53.71 E-value=56 Score=20.79 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=15.9
Q ss_pred hhhhhHHHHHHHHHhhh-CChHHH
Q 036778 45 LFQVPVVGSSVLLADKF-GRRPLL 67 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~-grr~~~ 67 (145)
+...++.+.+++++-|. ++|..+
T Consensus 45 ~i~~ls~~~GG~~a~~~~~~kG~l 68 (116)
T PF12670_consen 45 IIYILSVFIGGFYAGRKAGSKGWL 68 (116)
T ss_pred HHHHHHHHHHHHHHHHHHccchHH
Confidence 66777778888876665 566655
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=51.38 E-value=30 Score=28.12 Aligned_cols=39 Identities=5% Similarity=-0.100 Sum_probs=25.2
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
|+...++..+-|++..+..++........+..+...+.+
T Consensus 413 pvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 413 PVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 344456667778877777777776666666665555444
No 252
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=50.51 E-value=32 Score=23.31 Aligned_cols=12 Identities=17% Similarity=0.401 Sum_probs=8.4
Q ss_pred HHHhhhCChHHH
Q 036778 56 LLADKFGRRPLL 67 (145)
Q Consensus 56 ~l~Dr~grr~~~ 67 (145)
..+||+-||-.+
T Consensus 56 ~Vs~RM~rRm~~ 67 (153)
T PF11947_consen 56 VVSNRMLRRMAV 67 (153)
T ss_pred HHHHHHHHHHHH
Confidence 456788777766
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=50.10 E-value=34 Score=27.35 Aligned_cols=16 Identities=31% Similarity=0.374 Sum_probs=13.2
Q ss_pred HHHHHHHh-----hhCChHHH
Q 036778 52 GSSVLLAD-----KFGRRPLL 67 (145)
Q Consensus 52 ~~~~~l~D-----r~grr~~~ 67 (145)
++...++| |+||||.+
T Consensus 81 llWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred HHHHhhhHHHHHHhhccccce
Confidence 45667888 99999998
No 254
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=47.91 E-value=24 Score=17.38 Aligned_cols=19 Identities=5% Similarity=-0.113 Sum_probs=10.4
Q ss_pred hhhhhhhhHHHHHHHHHhh
Q 036778 42 IQSLFQVPVVGSSVLLADK 60 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr 60 (145)
.+.+++.+.+.+.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 3445565566666665543
No 255
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=43.29 E-value=28 Score=21.29 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=13.9
Q ss_pred hhhhhHHHHHHHHHhhhCCh
Q 036778 45 LFQVPVVGSSVLLADKFGRR 64 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr 64 (145)
+..++.+++.|.+.||..||
T Consensus 86 ~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 86 AVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 55666778899999999886
No 256
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=41.14 E-value=9 Score=31.28 Aligned_cols=47 Identities=11% Similarity=-0.077 Sum_probs=0.0
Q ss_pred hHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 15 YASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 15 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
-.+++.+.++++ +.+..++.+ .+.++..+..++..++.+|..|-|++
T Consensus 25 ~lttiErRF~l~--S~~~G~i~s----~~di~~~~~~~~vsy~g~~~hrprwi 71 (539)
T PF03137_consen 25 SLTTIERRFGLS--SSQSGLISS----SYDIGSLVVVLFVSYFGGRGHRPRWI 71 (539)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHhcCCC--HHHHHHHHH----HHHHHHHHHHHHHHHHhhhcCCccee
Confidence 455666778884 544444444 88899999999999999886665655
No 257
>PF06939 DUF1286: Protein of unknown function (DUF1286); InterPro: IPR009705 This entry is represented by Sulfolobus virus STSV1, Orf8. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical archaeal proteins of around 120 residues in length. All members of this family seem to be Sulfolobus species specific. The function of this family is unknown.
Probab=39.00 E-value=36 Score=21.77 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=15.7
Q ss_pred hhhHHHHHHHHHhhhCChHHH
Q 036778 47 QVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 47 ~~~~~~~~~~l~Dr~grr~~~ 67 (145)
..+.++.+..++||+|+|..-
T Consensus 32 s~iiSvl~N~lID~lGH~Ei~ 52 (114)
T PF06939_consen 32 SGIISVLGNTLIDRLGHKEIR 52 (114)
T ss_pred HHHHHHHHHHHHHhcccHHHh
Confidence 445667788899999997643
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.62 E-value=96 Score=25.05 Aligned_cols=23 Identities=30% Similarity=0.341 Sum_probs=14.2
Q ss_pred hhhhhHHHHHHHHHh---hhCChHHH
Q 036778 45 LFQVPVVGSSVLLAD---KFGRRPLL 67 (145)
Q Consensus 45 ~~~~~~~~~~~~l~D---r~grr~~~ 67 (145)
++++++....+.+.+ |+||++.+
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~ 315 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTV 315 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcch
Confidence 556666666666654 45777765
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=36.33 E-value=2.2e+02 Score=22.94 Aligned_cols=42 Identities=7% Similarity=-0.019 Sum_probs=33.9
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
+..-++.+-...++.+++..++...+..+++.+.+.++..+.
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 445567788889999999999999888888888887776554
No 260
>PF01595 DUF21: Domain of unknown function DUF21; InterPro: IPR002550 This transmembrane region has no known function. Many of the sequences in this family are annotated as hemolysins, however this is due to a similarity to Q54318 from SWISSPROT that does not contain this domain. This domain is found in the N terminus of the proteins adjacent to two intracellular CBS domains (IPR000644 from INTERPRO).
Probab=36.05 E-value=1.3e+02 Score=20.10 Aligned_cols=16 Identities=13% Similarity=0.048 Sum_probs=11.0
Q ss_pred CCCCCHHHHHHHHhhc
Q 036778 128 TKGRTLEEIQRSIIKF 143 (145)
Q Consensus 128 t~~~~l~~i~~~~~~~ 143 (145)
....+.||++++.+..
T Consensus 158 ~~~~s~eel~~lv~~~ 173 (183)
T PF01595_consen 158 DPAVSEEELRSLVEEG 173 (183)
T ss_pred cCCCCHHHHHHHHHhH
Confidence 3456788888877644
No 261
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=35.51 E-value=33 Score=23.99 Aligned_cols=22 Identities=18% Similarity=-0.088 Sum_probs=19.2
Q ss_pred hhhhhhhhHHHHHHHHHhhhCC
Q 036778 42 IQSLFQVPVVGSSVLLADKFGR 63 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~gr 63 (145)
+|-++..++.++.|++.||..+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 6777788899999999999986
No 262
>PF08129 Antimicrobial17: Alpha/beta enterocin family; InterPro: IPR012950 This entry consists of the alpha enterocins and lactococcin G peptides. These peptides have some antimicrobial properties; they inhibit the growth of Enterococcus spp. and a few other Gram-positive bacteria. These peptides act as pore-forming toxins that create cell membrane channels through a barrel-stave mechanism and thus produce an ionic imbalance in the cell. This family of antimicrobial peptides belongs to the class II group of bacteriocin [].; PDB: 2JPL_A 2JPJ_A.
Probab=35.12 E-value=17 Score=19.57 Aligned_cols=24 Identities=17% Similarity=-0.049 Sum_probs=14.1
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChH
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRP 65 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~ 65 (145)
.||+.-..|...-.--+||++||+
T Consensus 33 aywv~k~mgnmsdvnqa~rinrkk 56 (57)
T PF08129_consen 33 AYWVGKAMGNMSDVNQASRINRKK 56 (57)
T ss_dssp HHHHHHHHTS-CHHHHHHHHHHHH
T ss_pred HHHHHHHhcChhhhhHHHHhcccc
Confidence 455555555544445577888876
No 263
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=34.94 E-value=32 Score=26.07 Aligned_cols=54 Identities=15% Similarity=0.082 Sum_probs=29.1
Q ss_pred hchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHH---------HHHhhhCChHHH
Q 036778 7 GGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSV---------LLADKFGRRPLL 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~Dr~grr~~~ 67 (145)
+..+... |.-.++++.|..++.. .++.- +-.+.-.+.+++.| +-.||+|||+.+
T Consensus 32 tAScWFT-Ylllfltqiglsp~~~--AmlML----~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 32 TASCWFT-YLLLFLTQIGLSPSSR--AMLML----IGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHH-HHHHHHHHhcCCcchh--HHHHH----hhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3333343 4455667777752322 12111 23344555555553 457899999987
No 264
>PRK03612 spermidine synthase; Provisional
Probab=34.84 E-value=1.7e+02 Score=23.97 Aligned_cols=27 Identities=19% Similarity=0.156 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 96 GSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
++..|-.+..+.+|+.+++.+.+++.-
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 345666777777777777777765543
No 265
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=34.29 E-value=3.8 Score=31.30 Aligned_cols=81 Identities=17% Similarity=0.029 Sum_probs=51.6
Q ss_pred hhhhhhhhHHHHHHHHHhhh-CChHHH--------------------------HHHHHHhhccccch---hhhhhcccCC
Q 036778 42 IQSLFQVPVVGSSVLLADKF-GRRPLL--------------------------LGYTITFSKGMVRL---PNLIMFETFS 91 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~-grr~~~--------------------------~~~~~~~~~~~~~~---~~~~~~e~~p 91 (145)
.|..-+++.++++|++.||. |-|.-. ..-++.+++|.-+. --.|.+-.|.
T Consensus 87 vYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFK 166 (459)
T KOG4686|consen 87 VYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFK 166 (459)
T ss_pred eccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEec
Confidence 78888999999999999985 544332 01111222222121 2246666777
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 92 INIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 92 ~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
-+.-+..+|+-..+.++|..+--.+.|++.+
T Consensus 167 GKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 167 GKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred CccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 7778888888888888887665555565554
No 266
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=32.57 E-value=1.7e+02 Score=20.09 Aligned_cols=23 Identities=9% Similarity=0.144 Sum_probs=18.8
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
+..++++..+.+..+|..+|.-+
T Consensus 108 ~~~l~~~~~~~~~~~~~~~R~~~ 130 (194)
T PF07698_consen 108 LYSLVSGIVAIFSVRRIRSRSDI 130 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677888888999999888876
No 267
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=30.54 E-value=1.5e+02 Score=19.02 Aligned_cols=18 Identities=11% Similarity=0.015 Sum_probs=9.6
Q ss_pred HhhhCChHHHHHHHHHhh
Q 036778 58 ADKFGRRPLLLGYTITFS 75 (145)
Q Consensus 58 ~Dr~grr~~~~~~~~~~~ 75 (145)
..|++|-|.+.+...+.+
T Consensus 5 ~~KiN~~R~~al~lif~g 22 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIG 22 (114)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 456677676644443333
No 268
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=29.52 E-value=2.9e+02 Score=21.98 Aligned_cols=92 Identities=8% Similarity=-0.048 Sum_probs=48.2
Q ss_pred hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHh-hhCChHHH----------------------------HHHHHH
Q 036778 23 ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLAD-KFGRRPLL----------------------------LGYTIT 73 (145)
Q Consensus 23 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D-r~grr~~~----------------------------~~~~~~ 73 (145)
+|++ ..+.+-+. +.+..+.++|....+++.. |.++++.. ..+.+.
T Consensus 239 fgms--v~eTT~Lt----a~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 239 FGMS--VGETTRLT----AFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred cCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5663 33444333 3666888888888888766 45555544 111122
Q ss_pred hhccccch-hhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 74 FSKGMVRL-PNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 74 ~~~~~~~~-~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
++.|...+ +-...-++-+.+..+..+|.....+.....++......+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211 123344566666777777776665555444444444333
No 269
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.15 E-value=74 Score=25.55 Aligned_cols=23 Identities=26% Similarity=0.037 Sum_probs=19.8
Q ss_pred hhhhhHHHHHHHHHhhhCChHHH
Q 036778 45 LFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
+...+++.+.+.+.||+++.+++
T Consensus 317 ~~y~ig~~lfg~la~k~~~~~wl 339 (464)
T KOG3764|consen 317 LSYAIGTNLFGKLADKYPHLRWL 339 (464)
T ss_pred cchhccCchHHHHHHhcCchhHH
Confidence 77899999999999999965555
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=28.78 E-value=2.1e+02 Score=22.79 Aligned_cols=31 Identities=19% Similarity=0.166 Sum_probs=20.3
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHH
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSN 110 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~ 110 (145)
.+...+.++..|++.+..+..+....-..|.
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl 392 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGL 392 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHH
Confidence 4556788888888887776666654444433
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=28.66 E-value=2.6e+02 Score=22.98 Aligned_cols=42 Identities=17% Similarity=-0.058 Sum_probs=34.4
Q ss_pred hhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 81 LPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 81 ~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
..|.+..|+...+.-.|-+++....++++..+++.+..++..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346788888888888899999999999988888887777665
No 272
>PF04695 Pex14_N: Peroxisomal membrane anchor protein (Pex14p) conserved region; InterPro: IPR006785 This conserved region defines a group of peroxisomal membrane anchor proteins which bind the PTS1 (peroxisomal targeting signal) receptor and are required for the import of PTS1-containing proteins into peroxisomes. Loss of functional Pex14p results in defects in both the PTS1 and PTS2-dependent import pathways. Deletion analysis of this conserved region implicates it in selective peroxisome degradation. In the majority of members this region is situated at the N terminus of the protein [, ].; GO: 0005777 peroxisome, 0016020 membrane; PDB: 2W85_A 2W84_A 3FF5_B.
Probab=26.39 E-value=33 Score=22.56 Aligned_cols=16 Identities=44% Similarity=0.563 Sum_probs=11.6
Q ss_pred CCCCCCHHHHHHHHhh
Q 036778 127 ETKGRTLEEIQRSIIK 142 (145)
Q Consensus 127 et~~~~l~~i~~~~~~ 142 (145)
|.||.+.+||++.+++
T Consensus 31 ~sKGLt~~EI~~al~~ 46 (136)
T PF04695_consen 31 ESKGLTEEEIDEALGR 46 (136)
T ss_dssp HHCT--HHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHh
Confidence 6789999999998864
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=26.35 E-value=3.4e+02 Score=21.71 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=23.1
Q ss_pred hhhhhhhhhhhhHHHHHHHHHhhhCChHH
Q 036778 38 ILRHIQSLFQVPVVGSSVLLADKFGRRPL 66 (145)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~Dr~grr~~ 66 (145)
+......+.++.|++...++.+|+|-.|.
T Consensus 297 i~R~~gav~Gl~gT~~~p~l~~riGlvr~ 325 (432)
T PF06963_consen 297 IFRGLGAVFGLLGTWVYPWLMKRIGLVRA 325 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 34446668889999999999999996665
No 274
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=26.31 E-value=47 Score=25.40 Aligned_cols=18 Identities=33% Similarity=0.180 Sum_probs=13.8
Q ss_pred HHHHHHHHHhhhCChHHH
Q 036778 50 VVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 50 ~~~~~~~l~Dr~grr~~~ 67 (145)
-..+.+-++||-|||+.-
T Consensus 88 FGtivgSLaDkqGRKrac 105 (454)
T KOG4332|consen 88 FGTIVGSLADKQGRKRAC 105 (454)
T ss_pred HHHHHHHHHhhhccccce
Confidence 334566799999999865
No 275
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.77 E-value=41 Score=21.83 Aligned_cols=14 Identities=14% Similarity=-0.052 Sum_probs=5.7
Q ss_pred HHHHHHHhhhCChH
Q 036778 52 GSSVLLADKFGRRP 65 (145)
Q Consensus 52 ~~~~~l~Dr~grr~ 65 (145)
++..++..|..||+
T Consensus 16 ~~~~~~~~rRR~r~ 29 (130)
T PF12273_consen 16 LFLFYCHNRRRRRR 29 (130)
T ss_pred HHHHHHHHHHHhhc
Confidence 33444444444443
No 276
>PF03817 MadL: Malonate transporter MadL subunit; InterPro: IPR004690 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=25.17 E-value=1.1e+02 Score=19.92 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=16.9
Q ss_pred hhhhhHHHHHHHHHhhhCChH
Q 036778 45 LFQVPVVGSSVLLADKFGRRP 65 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~ 65 (145)
+..++.++....+.+|+||+.
T Consensus 99 i~av~~~~~~ip~lsr~g~~~ 119 (125)
T PF03817_consen 99 IGAVAVCFLLIPLLSRIGRKT 119 (125)
T ss_pred HHHHHHHHHHHHHHHhcCCCC
Confidence 677778888888899999764
No 277
>PRK10983 putative inner membrane protein; Provisional
Probab=24.66 E-value=2.1e+02 Score=22.23 Aligned_cols=15 Identities=20% Similarity=0.260 Sum_probs=8.3
Q ss_pred CCHHHHHHHHhhccC
Q 036778 131 RTLEEIQRSIIKFSQ 145 (145)
Q Consensus 131 ~~l~~i~~~~~~~~~ 145 (145)
.+.||+-|+.|+.+|
T Consensus 353 ~~~~~~~~~~~~~~~ 367 (368)
T PRK10983 353 DQPEEILEELEEIEK 367 (368)
T ss_pred CChhHHHHHHHhccC
Confidence 345666666655543
No 278
>PF05298 Bombinin: Bombinin; InterPro: IPR007962 This family consists of Bombinin and Maximin proteins from Bombina maxima (Giant fire-bellied toad). Two groups of antimicrobial peptides have been isolated from skin secretions of B. maxima. Peptides in the first group, named maximins 1, 2, 3, 4 and 5, are structurally related to bombinin-like peptides (BLPs). Unlike BLPs, sequence variations in maximins occurred all through the molecules. In addition to the potent antimicrobial activity, cytotoxicity against tumour cells and spermicidal action of maximins, maximin 3 possessed a significant anti-Simian-Human immunodeficiency virus (HIV) activity. Maximins 1 and 3 have been found to be toxic to mice. Peptides in the second group, termed maximins H1, H2, H3 and H4, are homologous with bombinin H peptides [].; GO: 0042742 defense response to bacterium, 0005576 extracellular region; PDB: 2AP7_A.
Probab=24.14 E-value=26 Score=22.40 Aligned_cols=20 Identities=35% Similarity=0.333 Sum_probs=0.0
Q ss_pred CCCCCCCHHHHHHHHhhccC
Q 036778 126 IETKGRTLEEIQRSIIKFSQ 145 (145)
Q Consensus 126 pet~~~~l~~i~~~~~~~~~ 145 (145)
+||++-+.|||...|.++++
T Consensus 103 retrgfnqeeianlftkkek 122 (141)
T PF05298_consen 103 RETRGFNQEEIANLFTKKEK 122 (141)
T ss_dssp --------------------
T ss_pred HHhcCCChhhhhhhhhhhhh
Confidence 67888888999888876653
No 279
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=23.68 E-value=72 Score=21.36 Aligned_cols=23 Identities=22% Similarity=-0.086 Sum_probs=18.9
Q ss_pred hhhhhhhhHHHHHHHHHhhhCCh
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRR 64 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr 64 (145)
+|-++..+.+.+.+++.+|..++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhcccc
Confidence 66677788888889999998776
No 280
>TIGR00807 malonate_madL malonate transporter, MadL subunit. The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=22.08 E-value=1.7e+02 Score=19.07 Aligned_cols=21 Identities=10% Similarity=-0.100 Sum_probs=16.6
Q ss_pred hhhhhHHHHHHHHHhhhCChH
Q 036778 45 LFQVPVVGSSVLLADKFGRRP 65 (145)
Q Consensus 45 ~~~~~~~~~~~~l~Dr~grr~ 65 (145)
+..++.++....+.+|+||+.
T Consensus 99 i~av~~~~~~i~~l~r~g~~~ 119 (125)
T TIGR00807 99 VAALIVTVLVIRWISKSSYGT 119 (125)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 777777888888889998763
No 281
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi. There are homologs of this protein found in both Gram-positive and Gram-negative bacteria. In E. chrysanthemi, a phytopathogenic bacterium, degraded pectin products from plant cell walls are transported by 2-keto-3-deoxygluconate permease into the bacterial cell to provide a carbon and energy source []. 2-keto-3-deoxygluconate permease can mediate the uptake of glucuronate with a low affinity [].; GO: 0015649 2-keto-3-deoxygluconate:hydrogen symporter activity, 0008643 carbohydrate transport, 0046411 2-keto-3-deoxygluconate transport, 0016021 integral to membrane
Probab=21.75 E-value=1.7e+02 Score=22.46 Aligned_cols=70 Identities=11% Similarity=-0.008 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhh-CChHHH-HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 50 VVGSSVLLADKF-GRRPLL-LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 50 ~~~~~~~l~Dr~-grr~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+-...++.||+ +||+-. .......+ +.....+..++|.-|+-.-....+..+ -..+..+-+.+.|++..
T Consensus 236 vtg~~~~~~dr~i~~~~g~aG~A~sstA-GnavatPaaiA~~dP~~~~~~~~ATaQ--vAaavIvTail~P~lt~ 307 (314)
T PF03812_consen 236 VTGIPLYLADRLILKGNGVAGAAISSTA-GNAVATPAAIAAADPSFAPYAASATAQ--VAAAVIVTAILTPILTS 307 (314)
T ss_pred HHhHHHHHHHHHHcCCCCceeehHHhhh-hhhhhhhHHHHHhChhhHhhHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 334456789998 555433 11111111 212233466777777543222222222 22233445555565554
No 282
>COG3944 Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]
Probab=20.97 E-value=3.1e+02 Score=19.87 Aligned_cols=46 Identities=7% Similarity=0.127 Sum_probs=26.9
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHh
Q 036778 88 ETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIEWSTIETKGRTLEEIQRSII 141 (145)
Q Consensus 88 e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pet~~~~l~~i~~~~~ 141 (145)
-+-|...|...+++.. +-.++....++.-++ +++-++.||+++..+
T Consensus 167 pvsP~~~~Ni~iaf~~--Gl~~~igiafl~e~l------D~tIKs~edie~~l~ 212 (226)
T COG3944 167 PVSPKVMRNIVIAFLA--GLAGAIGIAFLLEYL------DKTIKSEEDIEEVLD 212 (226)
T ss_pred CCChHHHHHHHHHHHH--HHHHHHHHHHHHHHH------hhhcCCHHHHHHhhC
Confidence 3456666777766654 233333333333333 778888889887653
No 283
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.63 E-value=3.5e+02 Score=19.85 Aligned_cols=77 Identities=10% Similarity=0.037 Sum_probs=37.4
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHHHHHHHHhhcccc-----chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLLLGYTITFSKGMV-----RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYA 116 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~~~~~~~~~~~~~-----~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~ 116 (145)
.|-++.++|+++.+.++.-+..-..+.=....++.|.+ ...-.-..+.+| +....-.++....+-+.+..+.+.
T Consensus 147 ~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 147 VYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred EeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888777776533221111011112222222 112233456676 455666666665555555555554
Q ss_pred HHH
Q 036778 117 FNF 119 (145)
Q Consensus 117 ~~~ 119 (145)
.-+
T Consensus 226 ~if 228 (241)
T PF11299_consen 226 SIF 228 (241)
T ss_pred HHH
Confidence 433
Done!