Query 036778
Match_columns 145
No_of_seqs 118 out of 1552
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:39:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036778.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036778hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gc0_A D-xylose-proton symport 99.9 5E-22 1.7E-26 153.2 9.6 137 2-144 286-482 (491)
2 4gc0_A D-xylose-proton symport 99.0 3.4E-09 1.2E-13 81.4 11.4 86 33-118 54-183 (491)
3 3o7q_A L-fucose-proton symport 98.9 3.6E-09 1.2E-13 79.9 8.7 106 10-121 43-177 (438)
4 2gfp_A EMRD, multidrug resista 98.9 6.8E-10 2.3E-14 82.6 3.9 109 8-122 15-149 (375)
5 4aps_A DI-OR tripeptide H+ sym 98.9 2.5E-08 8.5E-13 76.6 11.0 107 10-122 30-171 (491)
6 1pw4_A Glycerol-3-phosphate tr 98.7 4.5E-08 1.5E-12 74.0 7.3 102 13-121 48-179 (451)
7 1pw4_A Glycerol-3-phosphate tr 98.6 1.4E-07 4.8E-12 71.3 9.2 110 7-122 266-408 (451)
8 3o7q_A L-fucose-proton symport 98.5 5.4E-07 1.8E-11 67.9 9.2 106 9-122 274-406 (438)
9 2xut_A Proton/peptide symporte 98.5 4.2E-07 1.4E-11 70.3 8.8 106 10-121 29-172 (524)
10 4aps_A DI-OR tripeptide H+ sym 98.3 1.9E-06 6.5E-11 66.1 7.8 81 42-122 327-447 (491)
11 2cfq_A Lactose permease; trans 98.3 1.1E-06 3.9E-11 66.5 6.2 82 41-122 266-374 (417)
12 2cfq_A Lactose permease; trans 97.8 9.2E-06 3.2E-10 61.4 2.8 51 11-67 25-76 (417)
13 2gfp_A EMRD, multidrug resista 97.4 8.5E-06 2.9E-10 60.3 -2.2 104 10-120 216-349 (375)
14 2xut_A Proton/peptide symporte 95.9 0.0024 8.3E-08 49.1 1.6 43 80-122 424-466 (524)
15 2g9p_A Antimicrobial peptide l 69.4 3.6 0.00012 17.7 1.8 14 53-66 2-15 (26)
16 2jpj_A Bacteriocin lactococcin 56.8 2.9 0.0001 20.1 0.4 24 42-65 14-37 (39)
17 3ff5_A PEX14P, peroxisomal bio 37.4 14 0.00046 19.7 1.1 17 126-142 37-53 (54)
18 4dve_A Biotin transporter BIOY 32.4 32 0.0011 23.3 2.7 24 41-64 100-123 (198)
19 2w84_A Peroxisomal membrane pr 30.8 20 0.00068 20.1 1.1 17 126-142 42-58 (70)
20 1cmk_I CAMP-dependent protein 30.2 6.8 0.00023 17.4 -0.7 9 58-66 9-17 (26)
No 1
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.87 E-value=5e-22 Score=153.18 Aligned_cols=137 Identities=26% Similarity=0.428 Sum_probs=107.9
Q ss_pred hhhhhhchHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------
Q 036778 2 LMQTLGGSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------- 67 (145)
Q Consensus 2 ~~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------- 67 (145)
+++|.++.+.+.+|.|.+.+..+.+ ....... +.+..+..+++.+++++++||+|||+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l 359 (491)
T 4gc0_A 286 IFQQFVGINVVLYYAPEVFKTLGAS--TDIALLQ----TIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSL 359 (491)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSSCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHhcchHHHHhcCCC--ccchhhH----HHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHH
Confidence 5788999999999999999988874 3211111 1134488889999999999999999987
Q ss_pred -----------------HHHHHHhhccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh--c-----
Q 036778 68 -----------------LGYTITFSKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE--W----- 123 (145)
Q Consensus 68 -----------------~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----- 123 (145)
..+...++.+.+++++.+.+|++|++.|+++++++...+++++++.+.++|.+.. +
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~ 439 (491)
T 4gc0_A 360 GTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHF 439 (491)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHH
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2233445667778889999999999999999999999999999999988887643 1
Q ss_pred cC----------------------CCCCCCCHHHHHHHHhhcc
Q 036778 124 ST----------------------IETKGRTLEEIQRSIIKFS 144 (145)
Q Consensus 124 ~~----------------------pet~~~~l~~i~~~~~~~~ 144 (145)
.. ||||+|++||+|++|++++
T Consensus 440 ~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~~ 482 (491)
T 4gc0_A 440 HNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPET 482 (491)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC---
T ss_pred hhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCCC
Confidence 00 9999999999999997664
No 2
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.01 E-value=3.4e-09 Score=81.36 Aligned_cols=86 Identities=20% Similarity=0.101 Sum_probs=62.5
Q ss_pred hhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHHHH-----------------------------------------HH
Q 036778 33 NFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLLLG-----------------------------------------YT 71 (145)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~~~-----------------------------------------~~ 71 (145)
....+++++.+.++.++|++++|+++||+|||+.+.. .+
T Consensus 54 ~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R 133 (491)
T 4gc0_A 54 NSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYR 133 (491)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHH
Confidence 3444566778999999999999999999999998810 01
Q ss_pred HHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Q 036778 72 ITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFN 118 (145)
Q Consensus 72 ~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~ 118 (145)
+..+.+. .+....|++|..|++.|++..++.......+...+.....
T Consensus 134 ~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~ 183 (491)
T 4gc0_A 134 IIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNY 183 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcch
Confidence 1112111 2456689999999999999999988777666665554443
No 3
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=98.93 E-value=3.6e-09 Score=79.95 Aligned_cols=106 Identities=7% Similarity=-0.114 Sum_probs=79.2
Q ss_pred HHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH----------------------
Q 036778 10 TAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL---------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~---------------------- 67 (145)
.......|.+.+++|.+ ..+..++. +.+.++..++.++.|+++||+|||+.+
T Consensus 43 ~~~~~~~~~~~~~~g~s--~~~~g~~~----~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 116 (438)
T 3o7q_A 43 NLNDILLPQFQQAFTLT--NFQAGLIQ----SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN 116 (438)
T ss_dssp HHHHHHHHHHHHHSCCC--SHHHHHHH----HHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcccccc
Confidence 44555678888889984 54444443 478899999999999999999999998
Q ss_pred ----HHHHHHhhccc---cchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 68 ----LGYTITFSKGM---VRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ----~~~~~~~~~~~---~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+. .+....+++|.+|++.|++.+++......+|..+++.+..++.
T Consensus 117 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 177 (438)
T 3o7q_A 117 YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111111 1445678999999999999999999999999999888877665
No 4
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=98.91 E-value=6.8e-10 Score=82.61 Aligned_cols=109 Identities=12% Similarity=-0.025 Sum_probs=78.8
Q ss_pred chHHHHHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH--------------------
Q 036778 8 GSTAIAYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-------------------- 67 (145)
Q Consensus 8 g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-------------------- 67 (145)
+........|.+.+++|.+ ..+..++. +.+.+...++.++.|+++||+|||+.+
T Consensus 15 ~~~~~~~~~~~~~~~~g~s--~~~~g~~~----~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 88 (375)
T 2gfp_A 15 AQTIYIPAIADMARDLNVR--EGAVQSVM----GAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSL 88 (375)
T ss_dssp HHHHHHHHHHHHHTTSSST--THHHHHHH----HHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHcCCC--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccH
Confidence 3344445567777778884 44444333 478899999999999999999999987
Q ss_pred ---HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....+.+|.+|++.|++..++......++..+++.+.+++.+
T Consensus 89 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 149 (375)
T 2gfp_A 89 TVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDT 149 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 1111111221 224556788999999999999999999999999888888776654
No 5
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=98.85 E-value=2.5e-08 Score=76.62 Aligned_cols=107 Identities=12% Similarity=0.036 Sum_probs=73.8
Q ss_pred HHHHHhHHHHHhh------hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhh-hCChHHH---------------
Q 036778 10 TAIAYYASSIFDV------ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADK-FGRRPLL--------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~grr~~~--------------- 67 (145)
+....+.+.++++ +|. +.....++. +.+.++..++.++.|+++|| +|||+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~----~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~ 103 (491)
T 4aps_A 30 YGMRAILLYYMWFLISTGDLHI--TRATAASIM----AIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLA 103 (491)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCS--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchhhcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 3443444555543 677 444444443 47889999999999999999 8999998
Q ss_pred --------HHHHHHhhcc---ccchhhhhhcccCCcch--hhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 --------LGYTITFSKG---MVRLPNLIMFETFSINI--KGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 --------~~~~~~~~~~---~~~~~~~~~~e~~p~~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....+..+.+ ..+....+++|.+|.+. |+++.++.+....+|..+++.+..++.+
T Consensus 104 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 171 (491)
T 4aps_A 104 LPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQE 171 (491)
T ss_dssp SCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHh
Confidence 1112222222 12455688999999988 6667777778888888888888777654
No 6
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=98.68 E-value=4.5e-08 Score=74.04 Aligned_cols=102 Identities=15% Similarity=-0.050 Sum_probs=73.4
Q ss_pred HHhHHHHHhhhCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-----------HHHHH---------
Q 036778 13 AYYASSIFDVASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL-----------LGYTI--------- 72 (145)
Q Consensus 13 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~-----------~~~~~--------- 72 (145)
..+.|.+.+++ . +.....++. +++.++..++.++.|+++||+|||+++ .....
T Consensus 48 ~~~~~~~~~~~-~--s~~~~g~~~----~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (451)
T 1pw4_A 48 ALAMPYLVEQG-F--SRGDLGFAL----SGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIA 120 (451)
T ss_dssp HHHHHHTTSST-T--CSSCHHHHH----HHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSS
T ss_pred HHHHHHHHHHh-c--cHhHHHHHH----HHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHH
Confidence 34556666667 5 444444443 478899999999999999999999998 00000
Q ss_pred -------Hhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 036778 73 -------TFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 73 -------~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (145)
..+.+ ..+....+++|.+|.+.|++.+++......+|..+++.+..++.
T Consensus 121 ~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 179 (451)
T 1pw4_A 121 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM 179 (451)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111 12445678999999999999999999999999888888877654
No 7
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=98.65 E-value=1.4e-07 Score=71.32 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=78.9
Q ss_pred hchHHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh--CChHHH----------------
Q 036778 7 GGSTAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF--GRRPLL---------------- 67 (145)
Q Consensus 7 ~g~~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--grr~~~---------------- 67 (145)
.+......+.|.++++ .|. +........ +...++.+++.++.+++.||+ |||+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (451)
T 1pw4_A 266 LLRYGILDWSPTYLKEVKHF--ALDKSSWAY----FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW 339 (451)
T ss_dssp HHHHHHHHHHHHHBTTBSCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCC--CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Confidence 3445566778888877 677 444333333 366788999999999999999 999887
Q ss_pred ----------HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036778 68 ----------LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSLVTFLHNN-SNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ----------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 122 (145)
.......+.+ ..+....+..|.+|++.|+++.++......+ +..+++.+.+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~ 408 (451)
T 1pw4_A 340 MNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD 408 (451)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011111 1133346889999999999999999999999 99999999888766
No 8
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=98.52 E-value=5.4e-07 Score=67.93 Aligned_cols=106 Identities=10% Similarity=0.027 Sum_probs=73.9
Q ss_pred hHHHHHhHHHH-Hhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH-------------------
Q 036778 9 STAIAYYASSI-FDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL------------------- 67 (145)
Q Consensus 9 ~~~~~~~~~~i-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~------------------- 67 (145)
......+.|.+ .++ +|. +......... ...++..++.++.++++||+|||+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~----~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T 3o7q_A 274 QTACWSYLIRYAVEEIPGM--TAGFAANYLT----GTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGG 347 (438)
T ss_dssp HHHHHHHHHHHHHHHSTTC--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHhhhccCCc--chhHHHHHHH----HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455677888 776 487 4443333333 66788999999999999999999988
Q ss_pred ---HHHHHHh---hccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 68 ---LGYTITF---SKGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 68 ---~~~~~~~---~~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
....... .....+..+.+..|.+|++ |+++.++.. .+.+++.+++.+.+++.+
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~ 406 (438)
T 3o7q_A 348 HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSD 406 (438)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHH
Confidence 0001111 1122355677888999977 888888877 677888888888887765
No 9
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=98.51 E-value=4.2e-07 Score=70.35 Aligned_cols=106 Identities=11% Similarity=0.038 Sum_probs=70.1
Q ss_pred HHHHHhHHHHHh-hhC------CCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhh-CChHHH--------------
Q 036778 10 TAIAYYASSIFD-VAS------NKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKF-GRRPLL-------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~-~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-grr~~~-------------- 67 (145)
+....+.+.++. ++| . +.....++.+ .+.++..++.++.|+++||+ |||+++
T Consensus 29 ~~~~~~l~~~l~~~~~~~~~~~~--s~~~~g~~~~----~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~ 102 (524)
T 2xut_A 29 YGMRNILTPFLMTALLLSIPEEL--RGAVAKDVFH----SFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFL 102 (524)
T ss_dssp HHHHHHHHHHHHHSCSSCCSSST--TTTTHHHHHH----HHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccc--CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 334445555554 477 6 4444444433 77789999999999999999 999987
Q ss_pred ----------HHHHHHhhcc---ccchhhhhhcccCCcchhhhHHHH---HHHHHHHHHHHHHHHHHHHh
Q 036778 68 ----------LGYTITFSKG---MVRLPNLIMFETFSINIKGSAGSL---VTFLHNNSNSLVAYAFNFMI 121 (145)
Q Consensus 68 ----------~~~~~~~~~~---~~~~~~~~~~e~~p~~~R~~~~~~---~~~~~~~~~~~~~~~~~~~~ 121 (145)
....+..+.+ ..+....+++|.+|++.|++..+. ......+|..+++.+..++.
T Consensus 103 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 172 (524)
T 2xut_A 103 AIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLL 172 (524)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHH
T ss_pred HHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011111111 124456789999999999876665 77777787777776665554
No 10
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=98.31 E-value=1.9e-06 Score=66.07 Aligned_cols=81 Identities=7% Similarity=-0.082 Sum_probs=59.6
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChHHH------------------H-H------------------HHHHhh---ccccch
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRPLL------------------L-G------------------YTITFS---KGMVRL 81 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~~~------------------~-~------------------~~~~~~---~~~~~~ 81 (145)
...+..+++.++.+++.||+|||+.. . . .....+ ....+.
T Consensus 327 ~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 406 (491)
T 4aps_A 327 LNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPV 406 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTH
T ss_pred cchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHH
Confidence 45577888889999999999998543 0 0 000111 111355
Q ss_pred hhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 82 PNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 82 ~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
.+.+..|.+|++.|+++.++.+....++..+++.+.+++.+
T Consensus 407 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~ 447 (491)
T 4aps_A 407 GLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNA 447 (491)
T ss_dssp HHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999998877765
No 11
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=98.29 E-value=1.1e-06 Score=66.46 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=58.0
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCChHHHH----HH---HHH----------------hhcc---ccchhhhhhcccCCcch
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRRPLLL----GY---TIT----------------FSKG---MVRLPNLIMFETFSINI 94 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr~~~~----~~---~~~----------------~~~~---~~~~~~~~~~e~~p~~~ 94 (145)
+...++..++.+..+++.||+|||+++. .. ... ++.+ ..+..+.+.+|.+|++.
T Consensus 266 ~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 345 (417)
T 2cfq_A 266 TMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF 345 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 3555778889999999999999999870 00 000 0000 01233578999999999
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHhh
Q 036778 95 KGSAGSLV-TFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 95 R~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 122 (145)
|+++.++. +...++++.+++.+.+++.+
T Consensus 346 ~g~~~g~~~~~~~~lg~~~gp~l~G~l~~ 374 (417)
T 2cfq_A 346 SATIYLVCFCFFKQLAMIFMSVLAGNMYE 374 (417)
T ss_dssp HHHHHHHHHTTTHHHHHHHHTHHHHTHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhHHHHHH
Confidence 99999985 66777888888887776654
No 12
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=97.80 E-value=9.2e-06 Score=61.45 Aligned_cols=51 Identities=22% Similarity=0.083 Sum_probs=37.8
Q ss_pred HHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH
Q 036778 11 AIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL 67 (145)
Q Consensus 11 ~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~ 67 (145)
....+.|.++++ +|.+ ..+...+ .+.+.++..+++++.|+++||+|||+.+
T Consensus 25 ~~~~~~~~~l~~~~g~s--~~~~g~~----~~~~~~~~~i~~~~~G~lsDr~Grr~~l 76 (417)
T 2cfq_A 25 AYFPFFPIWLHDINHIS--KSDTGII----FAAISLFSLLFQPLFGLLSDKLGLRKYL 76 (417)
T ss_dssp HHTTTHHHHHHTTTCCC--TTTSHHH----HHHHHHHHHHHHHHHHHHHTTSTTCCHH
T ss_pred HHHHHHHHHHHHHhCCC--HHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 334567777665 7884 4433333 3377799999999999999999999988
No 13
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=97.41 E-value=8.5e-06 Score=60.31 Aligned_cols=104 Identities=16% Similarity=0.058 Sum_probs=64.4
Q ss_pred HHHHHhHHHHHhh-hCCCCCcchhhhheehhhhhhhhhhhhHHHHHHHHHhhhCChHHH---------------------
Q 036778 10 TAIAYYASSIFDV-ASNKLSTKFGNFRISILRHIQSLFQVPVVGSSVLLADKFGRRPLL--------------------- 67 (145)
Q Consensus 10 ~~~~~~~~~i~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~grr~~~--------------------- 67 (145)
.....+.|.+.++ .|. ++..... +.+...++..++.++.+++.||.+||...
T Consensus 216 ~~~~~~~~~~~~~~~g~--~~~~~g~----~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (375)
T 2gfp_A 216 AAFEACSGVLMGAVLGL--SSMTVSI----LFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVM 289 (375)
T ss_dssp HHHHHHCSCSSHHHHHH--HHHHHHH----HHHTHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHTSSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC--CHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 3344444555554 565 3333332 23366688888889999999999874443
Q ss_pred -----HHHHHHhh---ccccchhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036778 68 -----LGYTITFS---KGMVRLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFM 120 (145)
Q Consensus 68 -----~~~~~~~~---~~~~~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (145)
.......+ ....+....+..|..| +.|+++.++.+....++..+++.+.+.+
T Consensus 290 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g~l 349 (375)
T 2gfp_A 290 NVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSAML 349 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTCTHH
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111 1123555678889998 8999999999988888877766554443
No 14
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=95.92 E-value=0.0024 Score=49.14 Aligned_cols=43 Identities=16% Similarity=-0.002 Sum_probs=35.8
Q ss_pred chhhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036778 80 RLPNLIMFETFSINIKGSAGSLVTFLHNNSNSLVAYAFNFMIE 122 (145)
Q Consensus 80 ~~~~~~~~e~~p~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (145)
+..+.+..|..|++.|++++|+.+....+++.+++.+.+.+.+
T Consensus 424 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~ 466 (524)
T 2xut_A 424 ATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKS 466 (524)
T ss_dssp HHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3345678899999999999999999999999998888776543
No 15
>2g9p_A Antimicrobial peptide latarcin 2A; helix-hinge-helix, antimicrobial protein; NMR {Synthetic}
Probab=69.41 E-value=3.6 Score=17.68 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=11.0
Q ss_pred HHHHHHhhhCChHH
Q 036778 53 SSVLLADKFGRRPL 66 (145)
Q Consensus 53 ~~~~l~Dr~grr~~ 66 (145)
++|.++.|+|||.+
T Consensus 2 lfgklikkfgrkai 15 (26)
T 2g9p_A 2 LFGKLIKKFGRKAI 15 (26)
T ss_dssp HHHHHHHHHTSHHH
T ss_pred cHHHHHHHHhHHHH
Confidence 35778999999864
No 16
>2jpj_A Bacteriocin lactococcin-G subunit alpha; peptide, anti-microbial, membrane bound, antimicrobial protein; NMR {Lactococcus lactis} PDB: 2jpl_A
Probab=56.81 E-value=2.9 Score=20.06 Aligned_cols=24 Identities=17% Similarity=-0.060 Sum_probs=13.9
Q ss_pred hhhhhhhhHHHHHHHHHhhhCChH
Q 036778 42 IQSLFQVPVVGSSVLLADKFGRRP 65 (145)
Q Consensus 42 ~~~~~~~~~~~~~~~l~Dr~grr~ 65 (145)
.||+.-.+|...-.--+||++||+
T Consensus 14 aywv~k~lgnmsdvnqa~rinrkk 37 (39)
T 2jpj_A 14 AYWVGKALGNLSDVNQASRINRKK 37 (39)
T ss_dssp HHHHHHHHTSCSHHHHHHHHHGGG
T ss_pred HHHHHHHhcchhhhhHHHHhhhhc
Confidence 445555555444444567888875
No 17
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=37.45 E-value=14 Score=19.65 Aligned_cols=17 Identities=35% Similarity=0.429 Sum_probs=13.5
Q ss_pred CCCCCCCHHHHHHHHhh
Q 036778 126 IETKGRTLEEIQRSIIK 142 (145)
Q Consensus 126 pet~~~~l~~i~~~~~~ 142 (145)
-+.||.+.+||++.+++
T Consensus 37 L~sKGLt~~EI~~Al~r 53 (54)
T 3ff5_A 37 LKKKGLTDEEIDLAFQQ 53 (54)
T ss_dssp HHHTTCCHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHc
Confidence 45689999999988764
No 18
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=32.44 E-value=32 Score=23.33 Aligned_cols=24 Identities=4% Similarity=-0.294 Sum_probs=18.4
Q ss_pred hhhhhhhhhHHHHHHHHHhhhCCh
Q 036778 41 HIQSLFQVPVVGSSVLLADKFGRR 64 (145)
Q Consensus 41 ~~~~~~~~~~~~~~~~l~Dr~grr 64 (145)
.+|-++..++.++.|++.||..++
T Consensus 100 gGYLiGF~~aA~v~G~l~~~~~~~ 123 (198)
T 4dve_A 100 GGYRIAWLFTPFLIGFFLKKLKIT 123 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTGG
T ss_pred hHHHHHHHHHHHHHHHHHHHcccc
Confidence 366677788888999999997644
No 19
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=30.78 E-value=20 Score=20.11 Aligned_cols=17 Identities=35% Similarity=0.438 Sum_probs=14.0
Q ss_pred CCCCCCCHHHHHHHHhh
Q 036778 126 IETKGRTLEEIQRSIIK 142 (145)
Q Consensus 126 pet~~~~l~~i~~~~~~ 142 (145)
-+.||.+.+||++.+++
T Consensus 42 L~sKGLt~eEI~~Al~r 58 (70)
T 2w84_A 42 LKKKGLTDEEIDMAFQQ 58 (70)
T ss_dssp HHHTTCCHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 46689999999998865
No 20
>1cmk_I CAMP-dependent protein kinase inhibitor, alpha form; phosphotransferase; HET: TPO SEP MYR; 2.90A {Homo sapiens}
Probab=30.17 E-value=6.8 Score=17.43 Aligned_cols=9 Identities=33% Similarity=0.578 Sum_probs=7.0
Q ss_pred HhhhCChHH
Q 036778 58 ADKFGRRPL 66 (145)
Q Consensus 58 ~Dr~grr~~ 66 (145)
.||.|||..
T Consensus 9 ~~RtGRRNA 17 (26)
T 1cmk_I 9 SGRTGRRNA 17 (26)
T ss_pred cCccccccc
Confidence 588888874
Done!