BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036792
(453 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 34/214 (15%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
LIG G FG VY+ LRDG +VA+K E ++ ++ FE + E + RHP+LV +I C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 263 NDDFKALVLEYMPKGSLENCLYSS---TCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+ +YM G+L+ LY S T + QRL I I A L YL HT IIH
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIH 162
Query: 320 CDLKPISVLLDEDMVAHLSDF---------------------------EYGMEGQVSTRS 352
D+K I++LLDE+ V ++DF EY ++G+++ +S
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 353 DIYGYGIVLMETF-TRKKPTDRMFVEELSLKDWV 385
D+Y +G+VL E R + E ++L +W
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 34/214 (15%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
LIG G FG VY+ LRDG +VA+K E ++ ++ FE + E + RHP+LV +I C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 263 NDDFKALVLEYMPKGSLENCLYSS---TCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+ +YM G+L+ LY S T + QRL I I A L YL HT IIH
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIH 162
Query: 320 CDLKPISVLLDEDMVAHLSDF---------------------------EYGMEGQVSTRS 352
D+K I++LLDE+ V ++DF EY ++G+++ +S
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 353 DIYGYGIVLMETF-TRKKPTDRMFVEELSLKDWV 385
D+Y +G+VL E R + E ++L +W
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 40/277 (14%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKVISS 260
N++G G FG VY+ RL DG VAVK +E + + F+ + E++ H NL+++
Sbjct: 36 NILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 261 CSNDDFKALVLEYMPKGSLENCLY---SSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP- 316
C + LV YM GS+ +CL S LD +R I + + L YL+ H P
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPK 154
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVST 350
IIH D+K ++LLDE+ A + DF EY G+ S
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 351 RSDIYGYGIVLMETFTRKKPTDRMFV---EELSLKDWVNNLLPISLMEVVDKTLLSGEKK 407
++D++GYG++L+E T ++ D + +++ L DWV LL +E + L G
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-- 272
Query: 408 GFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
K++ V ++ +A+ C P +R ++V L
Sbjct: 273 ---YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 40/277 (14%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKVISS 260
N++G G FG VY+ RL DG VAVK +E + + F+ + E++ H NL+++
Sbjct: 44 NILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 261 CSNDDFKALVLEYMPKGSLENCLY---SSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP- 316
C + LV YM GS+ +CL S LD +R I + + L YL+ H P
Sbjct: 104 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH-DHCDPK 162
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVST 350
IIH D+K ++LLDE+ A + DF EY G+ S
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 351 RSDIYGYGIVLMETFTRKKPTDRMFV---EELSLKDWVNNLLPISLMEVVDKTLLSGEKK 407
++D++GYG++L+E T ++ D + +++ L DWV LL +E + L G
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-- 280
Query: 408 GFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
K++ V ++ +A+ C P +R ++V L
Sbjct: 281 ---YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG+V+RA G +VAVK+ ++ A + F + +MK +RHPN+V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ ++V EY+ +GSL L+ S LD +RL++ D + YL+ PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 320 CDLKPISVLLDEDMVAHLSDF-------------------------EYGMEGQVSTRSDI 354
DLK ++L+D+ + DF E + + +SD+
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 355 YGYGIVLMETFTRKKP 370
Y +G++L E T ++P
Sbjct: 223 YSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG+V+RA G +VAVK+ ++ A + F + +MK +RHPN+V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ ++V EY+ +GSL L+ S LD +RL++ D + YL+ PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 320 CDLKPISVLLDEDMVAHLSDF-------------------------EYGMEGQVSTRSDI 354
+LK ++L+D+ + DF E + + +SD+
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDV 222
Query: 355 YGYGIVLMETFTRKKP 370
Y +G++L E T ++P
Sbjct: 223 YSFGVILWELATLQQP 238
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L + +D + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 244 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 127/303 (41%), Gaps = 48/303 (15%)
Query: 189 GILPSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEA 241
G P+Q R L L +G G+FGSV R L+D G VAVK L+ FE
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 242 QCEVMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM 299
+ E++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 300 IDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 341 ---------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLL 389
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 390 PISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRD 449
L+E++ G C I + EC +R + +D+ R+ +IRD
Sbjct: 238 VFHLIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 450 TLS 452
++
Sbjct: 292 NMA 294
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 127/303 (41%), Gaps = 48/303 (15%)
Query: 189 GILPSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEA 241
G P+Q R L L +G G+FGSV R L+D G VAVK L+ FE
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 242 QCEVMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM 299
+ E++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 300 IDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 341 ---------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLL 389
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 390 PISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRD 449
L+E++ G C I + EC +R + +D+ R+ +IRD
Sbjct: 238 VFHLIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 450 TLS 452
++
Sbjct: 292 NMA 294
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 244 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 94
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 155 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 272 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 9 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 129 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 245
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 246 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 11 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 70
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 131 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 247
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 248 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 241 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 3 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 123 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 239
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 240 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 10 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 130 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 246
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 247 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 8 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 128 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 244
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 245 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 2 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 122 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 238
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 239 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 5 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++EY+P GSL + L +D + L
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYG--------- 343
+EYL T IH +L ++L++ + + DF EY
Sbjct: 125 CKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 344 ---------MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 241
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 242 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 295
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 192 PSQATLRRLSNL--IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCE 244
P+Q R L L +G G+FGSV R L+D G VAVK L+ FE + E
Sbjct: 7 PTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 245 VMKSIRHPNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++KS++H N+VK C + + L++E++P GSL L +D + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
+EYL T IH DL ++L++ + + DF
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPIS 392
E E + S SD++ +G+VL E FT + + E + + D ++
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 243
Query: 393 LMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
L+E++ G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 244 LIELLKNNGRLPRPDG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 200 LSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKV 257
L IG G+FG V+ RLR D VAVK + LK+ F + ++K HPN+V++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
I C+ +V+E + G L + L + L ++ DA + +EYL +
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCC 234
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGME---------------------------GQVST 350
IH DL + L+ E V +SDF E G+ S+
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 351 RSDIYGYGIVLMETFT 366
SD++ +GI+L ETF+
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 46/286 (16%)
Query: 204 IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G+FGSV R L+D G VAVK L+ FE + E++KS++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 259 SSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
C + + L++EY+P GSL + L +D + L +EYL T
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------------EYGMEGQV 348
IH DL ++L++ + + DF E E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 349 STRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPISLMEVVDKTLLSGEK 406
S SD++ +G+VL E FT + + E + + D ++ L+E++
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 407 KGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTLS 452
G C I + EC +R + +D+ R+ +IRD ++
Sbjct: 273 DG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 200 LSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKV 257
L IG G+FG V+ RLR D VAVK + LK+ F + ++K HPN+V++
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
I C+ +V+E + G L + L + L ++ DA + +EYL +
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCC 234
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGME---------------------------GQVST 350
IH DL + L+ E V +SDF E G+ S+
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 351 RSDIYGYGIVLMETFT 366
SD++ +GI+L ETF+
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 46/285 (16%)
Query: 204 IGMGSFGSVYRAR---LRD--GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G+FGSV R L+D G VAVK L+ FE + E++KS++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 259 SSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
C + + L++EY+P GSL + L +D + L +EYL T
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------------EYGMEGQV 348
IH DL ++L++ + + DF E E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 349 STRSDIYGYGIVLMETFTRKKPTDRMFVEELSL--KDWVNNLLPISLMEVVDKTLLSGEK 406
S SD++ +G+VL E FT + + E + + D ++ L+E++
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP 272
Query: 407 KGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
G C I + EC +R + +D+ R+ +IRD +
Sbjct: 273 DG------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+ ++G G+FG V +A+ R +VA+K E R K+F + + + HPN+VK+
Sbjct: 13 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 69
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCM--LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+C N LV+EY GSL N L+ + + ++ + + + YL+ +
Sbjct: 70 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 318 IHCDLKPISVLL-DEDMVAHLSDFEYGMEGQV----------------------STRSDI 354
IH DLKP ++LL V + DF + Q S + D+
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 187
Query: 355 YGYGIVLMETFTRKKPTDRM 374
+ +GI+L E TR+KP D +
Sbjct: 188 FSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 30/200 (15%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+ ++G G+FG V +A+ R +VA+K E R K+F + + + HPN+VK+
Sbjct: 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYG 68
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCM--LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+C N LV+EY GSL N L+ + + ++ + + + YL+ +
Sbjct: 69 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 318 IHCDLKPISVLL-DEDMVAHLSDFEYGMEGQV----------------------STRSDI 354
IH DLKP ++LL V + DF + Q S + D+
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDV 186
Query: 355 YGYGIVLMETFTRKKPTDRM 374
+ +GI+L E TR+KP D +
Sbjct: 187 FSWGIILWEVITRRKPFDEI 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQ----ECARALKSFEAQCEVMKSIRHPNLVKV 257
N +G G FG VY+ + + VAVK + F+ + +VM +H NLV++
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 258 ISSCSNDDFKALVLEYMPKGSLEN---CLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ S+ D LV YMP GSL + CL T L R I A + + +L+ H
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQV 348
IH D+K ++LLDE A +SDF + G++
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEI 211
Query: 349 STRSDIYGYGIVLMETFT 366
+ +SDIY +G+VL+E T
Sbjct: 212 TPKSDIYSFGVVLLEIIT 229
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQ----ECARALKSFEAQCEVMKSIRHPNLVKV 257
N +G G FG VY+ + + VAVK + F+ + +VM +H NLV++
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 258 ISSCSNDDFKALVLEYMPKGSLEN---CLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ S+ D LV YMP GSL + CL T L R I A + + +L+ H
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQV 348
IH D+K ++LLDE A +SDF + G++
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEI 211
Query: 349 STRSDIYGYGIVLMETFT 366
+ +SDIY +G+VL+E T
Sbjct: 212 TPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQ----ECARALKSFEAQCEVMKSIRHPNLVKV 257
N +G G FG VY+ + + VAVK + F+ + +VM +H NLV++
Sbjct: 31 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 258 ISSCSNDDFKALVLEYMPKGSLEN---CLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ S+ D LV YMP GSL + CL T L R I A + + +L+ H
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQV 348
IH D+K ++LLDE A +SDF + G++
Sbjct: 149 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEI 205
Query: 349 STRSDIYGYGIVLMETFT 366
+ +SDIY +G+VL+E T
Sbjct: 206 TPKSDIYSFGVVLLEIIT 223
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
LS IG GSFG+VY+ + + V + ++F + V++ RH N++ +
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ D+ A+V ++ SL L+ +FQ ++I ++YL H IIH
Sbjct: 100 YMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIH 155
Query: 320 CDLKPISVLLDEDMVAHLSDF-------EYGMEGQV-----------------------S 349
D+K ++ L E + + DF + QV S
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 350 TRSDIYGYGIVLMETFTRKKP 370
+SD+Y YGIVL E T + P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 51/273 (18%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + + +VAVK+ +E + + F + + M + HP LVK CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
+ +V EY+ G L N L S L+ Q L + D + +L + IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLA 131
Query: 324 PISVLLDEDMVAHLSDF---EYGMEGQ-----------------------VSTRSDIYGY 357
+ L+D D+ +SDF Y ++ Q S++SD++ +
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 358 GIVLMETFT-RKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFVAKEQCV 416
GI++ E F+ K P D E+ LK +S + + L+ +
Sbjct: 192 GILMWEVFSLGKMPYDLYTNSEVVLK--------VSQGHRLYRPHLASD----------- 232
Query: 417 LSILGLAMECAMELPEKRINAKDIVTRLLKIRD 449
+I + C ELPEKR + +++ + +R+
Sbjct: 233 -TIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L IG G FG V R G +VAVK + ++F A+ VM +RH NLV+++
Sbjct: 15 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 71
Query: 259 SSCSNDDFK-ALVLEYMPKGSLENCLYS-STCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ +V EYM KGSL + L S +L L +D +EYL
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNN 128
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------EYGMEGQVSTRSDI 354
+H DL +VL+ ED VA +SDF E E ST+SD+
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 355 YGYGIVLMETFT 366
+ +GI+L E ++
Sbjct: 189 WSFGILLWEIYS 200
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L IG G FG V R G +VAVK + ++F A+ VM +RH NLV+++
Sbjct: 9 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 65
Query: 259 SSCSNDDFK-ALVLEYMPKGSLENCLYS-STCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ +V EYM KGSL + L S +L L +D +EYL
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNN 122
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------EYGMEGQVSTRSDI 354
+H DL +VL+ ED VA +SDF E E + ST+SD+
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 355 YGYGIVLMETFT 366
+ +GI+L E ++
Sbjct: 183 WSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L IG G FG V R G +VAVK + ++F A+ VM +RH NLV+++
Sbjct: 24 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 80
Query: 259 SSCSNDDFK-ALVLEYMPKGSLENCLYS-STCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ +V EYM KGSL + L S +L L +D +EYL
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNN 137
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------EYGMEGQVSTRSDI 354
+H DL +VL+ ED VA +SDF E E + ST+SD+
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 355 YGYGIVLMETFT 366
+ +GI+L E ++
Sbjct: 198 WSFGILLWEIYS 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFH----QECARALKSFEAQCEVMKSIRHPNLV 255
L +IG+G FG VYRA G EVAVK ++ ++ +++ + ++ ++HPN++
Sbjct: 11 LEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
+ C + LV+E+ G L L DI +N + + YL+
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIV 127
Query: 316 PIIHCDLKPISVLLDEDM--------VAHLSDFEYGMEGQVSTR---------------- 351
PIIH DLK ++L+ + + + ++DF E +T+
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIR 187
Query: 352 -------SDIYGYGIVLMETFTRKKP 370
SD++ YG++L E T + P
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 184 DVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQ 242
D S+D +P Q T+ IG GSFG+VY+ + + V + + L++F+ +
Sbjct: 14 DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
V++ RH N++ + + A+V ++ SL + L++S ++ + ++I
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME--------------GQV 348
++YL H IIH DLK ++ L ED + DF E G +
Sbjct: 130 ARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 349 ----------------STRSDIYGYGIVLMETFTRKKP 370
S +SD+Y +GIVL E T + P
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 174 KLTKCGKRGLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQEC 232
++ G+R D S+D +P Q T+ IG GSFG+VY+ + + V +
Sbjct: 10 RMKTLGRR--DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 64
Query: 233 ARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+ L++F+ + V++ RH N++ + + A+V ++ SL + L+ ++
Sbjct: 65 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM 123
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------- 345
+ ++I ++YL H IIH DLK ++ L ED+ + DF E
Sbjct: 124 IKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 180
Query: 346 -------GQV----------------STRSDIYGYGIVLMETFTRKKP 370
G + S +SD+Y +GIVL E T + P
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L IG G FG V R G +VAVK + ++F A+ VM +RH NLV+++
Sbjct: 196 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLL 252
Query: 259 SSCSNDDFK-ALVLEYMPKGSLENCLYS-STCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ +V EYM KGSL + L S +L L +D +EYL
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNN 309
Query: 317 IIHCDLKPISVLLDEDMVAHLSDF----------------------EYGMEGQVSTRSDI 354
+H DL +VL+ ED VA +SDF E E + ST+SD+
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 355 YGYGIVLMETFT 366
+ +GI+L E ++
Sbjct: 370 WSFGILLWEIYS 381
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 174 KLTKCGKRGLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQEC 232
++ G+R D S+D +P Q T+ IG GSFG+VY+ + + V +
Sbjct: 18 RMKTLGRR--DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 72
Query: 233 ARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+ L++F+ + V++ RH N++ + + A+V ++ SL + L+ ++
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------- 345
+ ++I ++YL H IIH DLK ++ L ED+ + DF E
Sbjct: 132 IKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 188
Query: 346 -------GQV----------------STRSDIYGYGIVLMETFTRKKP 370
G + S +SD+Y +GIVL E T + P
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 184 DVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQ 242
D ++D +P Q T+ IG GSFG+VY+ + + V + + L++F+ +
Sbjct: 14 DAADDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
V++ RH N++ + + A+V ++ SL + L++S ++ + ++I
Sbjct: 71 VGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME--------------GQV 348
++YL H IIH DLK ++ L ED + DF E G +
Sbjct: 130 ARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 349 ----------------STRSDIYGYGIVLMETFTRKKP 370
S +SD+Y +GIVL E T + P
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 38/198 (19%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQ----ECARALKSFEAQCEVMKSIRHPNLVKV 257
N G G FG VY+ + + VAVK + F+ + +V +H NLV++
Sbjct: 28 NKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 258 ISSCSNDDFKALVLEYMPKGSLEN---CLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ S+ D LV Y P GSL + CL T L R I A + + +L+ H
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQV 348
IH D+K ++LLDE A +SDF + G++
Sbjct: 146 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI 202
Query: 349 STRSDIYGYGIVLMETFT 366
+ +SDIY +G+VL+E T
Sbjct: 203 TPKSDIYSFGVVLLEIIT 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 182 GLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFE 240
G D S+D +P Q T+ IG GSFG+VY+ + + V + + L++F+
Sbjct: 1 GSDSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFK 57
Query: 241 AQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMI 300
+ V++ RH N++ + + A+V ++ SL + L+ ++ + ++I
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 116
Query: 301 DATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------------MEG 346
++YL H IIH DLK ++ L ED+ + DF + G
Sbjct: 117 QTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 347 QV----------------STRSDIYGYGIVLMETFTRKKP 370
+ S +SD+Y +GIVL E T + P
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 182 GLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFE 240
G D S+D +P Q T+ IG GSFG+VY+ + + V + + L++F+
Sbjct: 1 GSDSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFK 57
Query: 241 AQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMI 300
+ V++ RH N++ + + A+V ++ SL + L+ ++ + ++I
Sbjct: 58 NEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 116
Query: 301 DATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------------MEG 346
++YL H IIH DLK ++ L ED+ + DF + G
Sbjct: 117 QTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 347 QV----------------STRSDIYGYGIVLMETFTRKKP 370
+ S +SD+Y +GIVL E T + P
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 174 KLTKCGKRGLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQEC 232
++ G+R D S+D +P Q T+ IG GSFG+VY+ + + V +
Sbjct: 17 RMKTLGRR--DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 71
Query: 233 ARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+ L++F+ + V++ RH N++ + + A+V ++ SL + L+ ++
Sbjct: 72 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM 130
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------- 343
+ ++I ++YL H IIH DLK ++ L ED+ + DF
Sbjct: 131 IKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 187
Query: 344 -----MEGQV----------------STRSDIYGYGIVLMETFTRKKP 370
+ G + S +SD+Y +GIVL E T + P
Sbjct: 188 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 40/228 (17%)
Query: 174 KLTKCGKRGLDVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQEC 232
++ G+R D S+D +P Q T+ IG GSFG+VY+ + + V +
Sbjct: 18 RMKTLGRR--DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 72
Query: 233 ARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+ L++F+ + V++ RH N++ + + A+V ++ SL + L+ ++
Sbjct: 73 PQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEM 131
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------- 343
+ ++I ++YL H IIH DLK ++ L ED+ + DF
Sbjct: 132 IKLIDIARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 188
Query: 344 -----MEGQV----------------STRSDIYGYGIVLMETFTRKKP 370
+ G + S +SD+Y +GIVL E T + P
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 38/218 (17%)
Query: 184 DVSNDGILP-SQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQ 242
D S+D +P Q T+ IG GSFG+VY+ + + V + + L++F+ +
Sbjct: 2 DSSDDWEIPDGQITV---GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 58
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
V++ RH N++ + + A+V ++ SL + L++S ++ + ++I
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------------MEGQV 348
++YL H IIH DLK ++ L ED + DF + G +
Sbjct: 118 ARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 349 ----------------STRSDIYGYGIVLMETFTRKKP 370
S +SD+Y +GIVL E T + P
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ A +VAVK + + ++++F A+ VMK+++H LVK+
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL-EYLYFGHTTPI 317
+ + + ++ E+M KGSL + L S Q L +ID ++ + E + F
Sbjct: 244 AVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---EYGME-------------GQVSTRSDIYGYGIVL 361
IH DL+ ++L+ +V ++DF G + G + +SD++ +GI+L
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 362 METFT 366
ME T
Sbjct: 360 MEIVT 364
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG GSFG+VY+ + + V + + L++F+ + V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V ++ SL + L+ ++ + ++I ++YL H IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLK 131
Query: 324 PISVLLDEDMVAHLSDFEYGME--------------GQV----------------STRSD 353
++ L ED+ + DF E G + S +SD
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 354 IYGYGIVLMETFTRKKP 370
+Y +GIVL E T + P
Sbjct: 192 VYAFGIVLYELMTGQLP 208
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 329 AVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 384
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 445 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 483
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 484 PCPPECPESLHDLMCQCWRKEPEER 508
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 69
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 70 AVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 186 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 224
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 225 PCPPECPESLHDLMCQCWRKEPEER 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 32/195 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ A +VAVK + + ++++F A+ VMK+++H LVK+
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL-EYLYFGHTTPI 317
+ + + ++ E+M KGSL + L S Q L +ID ++ + E + F
Sbjct: 77 AVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ +V ++DF EY G + +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 352 SDIYGYGIVLMETFT 366
SD++ +GI+LME T
Sbjct: 193 SDVWSFGILLMEIVT 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q +L+ + +MK + HPN+V
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 133
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E V + D +
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF 173
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 47/209 (22%)
Query: 199 RLSNLIGMGSFGSVYRARLR-DGI--EVAVKVFHQECARA-LKSFEAQCEVM-KSIRHPN 253
+ ++IG G+FG V +AR++ DG+ + A+K + ++ + F + EV+ K HPN
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLY---------------SSTCMLDIFQRLNI 298
++ ++ +C + + L +EY P G+L + L S+ L Q L+
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--EYGMEGQV-------- 348
D ++YL IH DL ++L+ E+ VA ++DF G E V
Sbjct: 148 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 349 --------------STRSDIYGYGIVLME 363
+T SD++ YG++L E
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 246 AVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 301
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFV- 410
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 362 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 400
Query: 411 -AKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 246 AVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 301
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFV- 410
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 362 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 400
Query: 411 -AKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q + +L+ + +MK + HPN+V
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 69
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYC---HQK 125
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E + D +
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 165
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 47/209 (22%)
Query: 199 RLSNLIGMGSFGSVYRARLR-DGI--EVAVKVFHQECARA-LKSFEAQCEVM-KSIRHPN 253
+ ++IG G+FG V +AR++ DG+ + A+K + ++ + F + EV+ K HPN
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLY---------------SSTCMLDIFQRLNI 298
++ ++ +C + + L +EY P G+L + L S+ L Q L+
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--EYGMEGQV-------- 348
D ++YL IH DL ++L+ E+ VA ++DF G E V
Sbjct: 138 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 349 --------------STRSDIYGYGIVLME 363
+T SD++ YG++L E
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 73 AVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 128
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 189 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 227
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 228 PCPPECPESLHDLMCQCWRKEPEER 252
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY-LYFGHTTPI 317
+ S + +V EYM KGSL + L T + RL ++D ++ + + +
Sbjct: 77 AVVSEEPI-YIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 193 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 231
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 232 PCPPECPESLHDLMCQCWRKEPEER 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY-LYFGHTTPI 317
+ S + +V EYM KGSL + L T + RL ++D ++ + + +
Sbjct: 77 AVVSEEPI-YIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 193 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 231
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 232 PCPPECPESLHDLMCQCWRKEPEER 256
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG GSFG+VY+ + + V + + L++F+ + V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V ++ SL + L+ ++ + ++I ++YL H IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLK 131
Query: 324 PISVLLDEDMVAHLSDFEYG--------------MEGQV----------------STRSD 353
++ L ED+ + DF + G + S +SD
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 354 IYGYGIVLMETFTRKKP 370
+Y +GIVL E T + P
Sbjct: 192 VYAFGIVLYELMTGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG GSFG+VY+ + + V + + L++F+ + V++ RH N++ + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V ++ SL + L+ ++ + ++I ++YL H IIH DLK
Sbjct: 78 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLK 133
Query: 324 PISVLLDEDMVAHLSDFEYG--------------MEGQV----------------STRSD 353
++ L ED+ + DF + G + S +SD
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 354 IYGYGIVLMETFTRKKP 370
+Y +GIVL E T + P
Sbjct: 194 VYAFGIVLYELMTGQLP 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V+EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK IRH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 32/195 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ A +VAVK + + ++++F A+ VMK+++H LVK+
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL-EYLYFGHTTPI 317
+ + + ++ E+M KGSL + L S Q L +ID ++ + E + F
Sbjct: 250 AVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ +V ++DF EY G + +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 352 SDIYGYGIVLMETFT 366
SD++ +GI+LME T
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V+EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 34/197 (17%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG GSFG+VY+ + + V + + L++F+ + V++ RH N++ + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V ++ SL + L+ ++ + ++I ++YL H IIH DLK
Sbjct: 76 PQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLK 131
Query: 324 PISVLLDEDMVAHLSDFEYG--------------MEGQV----------------STRSD 353
++ L ED+ + DF + G + S +SD
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 354 IYGYGIVLMETFTRKKP 370
+Y +GIVL E T + P
Sbjct: 192 VYAFGIVLYELMTGQLP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L T L + Q +++ S + Y+
Sbjct: 246 AVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNY 301
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFV- 410
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 362 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 400
Query: 411 -AKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEER 425
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q + +L+ + +MK + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E + D +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q + +L+ + +MK + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E + D +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q + +L+ + +MK + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E + D +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF 172
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 179 GKRGLDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKS 238
G GL + I P T + +G G FG V + R +VA+K+ +E + +
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDE 56
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
F + +VM ++ H LV++ C+ ++ EYM G L N L Q L +
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------EYG------ 343
D +EYL + +H DL + L+++ V +SDF EY
Sbjct: 117 CKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 344 -----------MEGQVSTRSDIYGYGIVLMETFT-RKKPTDRM 374
M + S++SDI+ +G+++ E ++ K P +R
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 71 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 187 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 225
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 226 PCPPECPESLHDLMCQCWRKDPEER 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM------EGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF G E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 69 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 185 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 223
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 224 PCPPECPESLHDLMCQCWRKDPEER 248
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 47/209 (22%)
Query: 199 RLSNLIGMGSFGSVYRARLR-DGI--EVAVKVFHQECARA-LKSFEAQCEVM-KSIRHPN 253
+ ++IG G+FG V +AR++ DG+ + A+K + ++ + F + EV+ K HPN
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLY---------------SSTCMLDIFQRLNI 298
++ ++ +C + + L +EY P G+L + L S+ L Q L+
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--EYGMEGQV-------- 348
D ++YL IH +L ++L+ E+ VA ++DF G E V
Sbjct: 145 AADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 349 --------------STRSDIYGYGIVLME 363
+T SD++ YG++L E
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVA+K+ Q +L+ + +MK + HPN+V
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 74
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + L++EY G + + L + M + R S ++Y H
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYC---HQK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E V + D +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF 170
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAV++ Q + +L+ + +MK + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E + D +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKVIS 259
IG GSFG+VY AR +R+ VA+K ++ + ++ + ++ +RHPN ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI----FQRLNIMIDATSTLEYLYFGHTT 315
+ LV+EY CL S++ +L++ Q + I L+ L + H+
Sbjct: 122 CYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF---------------EYGM---------EGQVSTR 351
+IH D+K ++LL E + L DF Y M EGQ +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 352 SDIYGYGIVLMETFTRKKP 370
D++ GI +E RK P
Sbjct: 234 VDVWSLGITCIELAERKPP 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 324 PISVLLDEDMVAHLSDF---------EYG-----------------MEGQVSTRSDIYGY 357
+ L+++ V +SDF EY M + S++SDI+ +
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 208 GVLMWEIYSLGKMPYERF 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVA+K+ Q +L+ + +MK + HPN+V
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + L++EY G + + L + M + R S ++Y H
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYC---HQK 133
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD DM ++DF + E V + D +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 34/194 (17%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G FG V+ + +VA+K +E A + + F + EVM + HP LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
LV E+M G L + L + + L + +D + YL +IH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEASVIHRDLA 130
Query: 324 PISVLLDEDMVAHLSDFEYGME----------------------------GQVSTRSDIY 355
+ L+ E+ V +SDF GM + S++SD++
Sbjct: 131 ARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 356 GYGIVLMETFTRKK 369
+G+++ E F+ K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 247 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 302
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFV- 410
SD++ +GI+L E T+ + +P M V++ +L ++G+
Sbjct: 363 SDVWSFGILLTELTTKGR-------------------VPYPGM--VNREVLDQVERGYRM 401
Query: 411 -AKEQCVLSILGLAMECAMELPEKR 434
+C S+ L +C + PE+R
Sbjct: 402 PCPPECPESLHDLMCQCWRKDPEER 426
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 324 PISVLLDEDMVAHLSDF---------EYG-----------------MEGQVSTRSDIYGY 357
+ L+++ V +SDF EY M + S++SDI+ +
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 193 GVLMWEIYSLGKMPYERF 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 324 PISVLLDEDMVAHLSDF---------EYG-----------------MEGQVSTRSDIYGY 357
+ L+++ V +SDF EY M + S++SDI+ +
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 193 GVLMWEIYSLGKMPYERF 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 324 PISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTRSDIYGY 357
+ L+++ V +SDF E M + S++SDI+ +
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 208 GVLMWEIYSLGKMPYERF 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 131
Query: 324 PISVLLDEDMVAHLSDF---------EYG-----------------MEGQVSTRSDIYGY 357
+ L+++ V +SDF EY M + S++SDI+ +
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 192 GVLMWEIYSLGKMPYERF 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKVIS 259
IG GSFG+VY AR +R+ VA+K ++ + ++ + ++ +RHPN ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI----FQRLNIMIDATSTLEYLYFGHTT 315
+ LV+EY CL S++ +L++ Q + I L+ L + H+
Sbjct: 83 CYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF---------------EYGM---------EGQVSTR 351
+IH D+K ++LL E + L DF Y M EGQ +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 352 SDIYGYGIVLMETFTRKKP 370
D++ GI +E RK P
Sbjct: 195 VDVWSLGITCIELAERKPP 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V+EYM KG L + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVMEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 89
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 150 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V + R +VA+K+ +E + + F + +VM ++ H LV++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
++ EYM G L N L Q L + D +EYL + +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 127
Query: 324 PISVLLDEDMVAHLSDF---------EYG-----------------MEGQVSTRSDIYGY 357
+ L+++ V +SDF EY M + S++SDI+ +
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 358 GIVLMETFT-RKKPTDRM 374
G+++ E ++ K P +R
Sbjct: 188 GVLMWEIYSLGKMPYERF 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
I PS+ T IG G FG V+ + +VA+K +E A + + F + EVM +
Sbjct: 7 IDPSELTF---VQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 62
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP LV++ C LV E+M G L + L + + L + +D + YL
Sbjct: 63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 122
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------------------------ 345
+IH DL + L+ E+ V +SDF GM
Sbjct: 123 ---EEACVIHRDLAARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPE 177
Query: 346 ----GQVSTRSDIYGYGIVLMETFTRKK 369
+ S++SD++ +G+++ E F+ K
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAV++ Q + +L+ + +MK + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV+EY G + + L + M + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSD 353
I+H DLK ++LLD DM ++DF + E + D
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 72
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
I PS+ T IG G FG V+ + +VA+K +E A + + F + EVM +
Sbjct: 4 IDPSELTF---VQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 59
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP LV++ C LV E+M G L + L + + L + +D + YL
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------------------------ 345
+IH DL + L+ E+ V +SDF GM
Sbjct: 120 ---EEACVIHRDLAARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 346 ----GQVSTRSDIYGYGIVLMETFTRKK 369
+ S++SD++ +G+++ E F+ K
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 70/289 (24%)
Query: 200 LSNLIGMGSFGSVYRAR------LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPN 253
L +G G+FG V+ A +D + VAVK A K F+ + E++ +++H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYS---------------STCMLDIFQRLNI 298
+VK C + D +V EYM G L L + + L + Q L+I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------ 340
S + YL H +H DL + L+ +++ + DF
Sbjct: 139 ASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 341 ---------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPI 391
E M + +T SD++ +G++L E FT K + W +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK------------QPWFQ----L 239
Query: 392 SLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDI 440
S EV++ + + C + + + C P++R+N K+I
Sbjct: 240 SNTEVIECIT---QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
I PS+ T IG G FG V+ + +VA+K +E A + + F + EVM +
Sbjct: 2 IDPSELTF---VQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 57
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP LV++ C LV E+M G L + L + + L + +D + YL
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------------------------ 345
+IH DL + L+ E+ V +SDF GM
Sbjct: 118 ---EEACVIHRDLAARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 346 ----GQVSTRSDIYGYGIVLMETFTRKK 369
+ S++SD++ +G+++ E F+ K
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+D+ G
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG 169
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 42 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 99
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V EYM GSL++ L + Q + ++ S ++
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 160 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+D+ G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG 168
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+D+ G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG 168
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+D+ G
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCG 173
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R D+ G
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG 194
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 27/257 (10%)
Query: 210 GSVYRARLRDGIEVAVKVF--HQECARALKSFEAQCEVMKSIRHPNLVKVISSCSNDD-- 265
G +++ R + G ++ VKV R + F +C ++ HPN++ V+ +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 266 FKALVLEYMPKGSLENCLYSST-CMLDIFQRLNIMIDATSTLEYLYFGHT-TPII--HCD 321
L+ +MP GSL N L+ T ++D Q + +D + +L HT P+I H
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHA- 138
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDR------MF 375
L SV++DEDM A +S + Q R +Y V E +KKP D M+
Sbjct: 139 LNSRSVMIDEDMTARISMADVKFSFQSPGR--MYAPAWVAPEAL-QKKPEDTNRRSADMW 195
Query: 376 VEELSLKDWVNNLLP---ISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPE 432
+ L + V +P +S ME+ K L G + +S L C E P
Sbjct: 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVS--KLMKICMNEDPA 253
Query: 433 KRINAKDIVTRLLKIRD 449
KR IV L K++D
Sbjct: 254 KRPKFDMIVPILEKMQD 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 37/208 (17%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
I PS+ T IG G FG V+ + +VA+K +E A + + F + EVM +
Sbjct: 5 IDPSELTF---VQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKL 60
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP LV++ C LV E+M G L + L + + L + +D + YL
Sbjct: 61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 120
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------------------------ 345
+IH DL + L+ E+ V +SDF GM
Sbjct: 121 ---EEACVIHRDLAARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 346 ----GQVSTRSDIYGYGIVLMETFTRKK 369
+ S++SD++ +G+++ E F+ K
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
RL +G G FG V+ VA+K + + ++F + +VMK +RH LV++
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ S + +V EYM KG L + L + + RL ++D A + +
Sbjct: 80 AVVSEEPI-YIVTEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
+H DL+ ++L+ E++V ++DF E + G+ + +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T+ +
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR R +A+KV + E A + E+ +RHPN++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL + ++DF + + S R+ + G
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCG 172
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R D+ G
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG 171
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG VY+A+ ++ G A KV + L+ + + E++ + HP +VK++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPIIH 319
+D +++E+ P G+++ ML++ + L I + LE L F H+ IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVD------AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK +VL+ + L+DF
Sbjct: 133 RDLKAGNVLMTLEGDIRLADF 153
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P+G +Y L F T L + H+ +IH
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R + G
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG 173
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG VY+A+ ++ G A KV + L+ + + E++ + HP +VK++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPIIH 319
+D +++E+ P G+++ ML++ + L I + LE L F H+ IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVD------AIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK +VL+ + L+DF
Sbjct: 141 RDLKAGNVLMTLEGDIRLADF 161
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P+G + Y L F T L + H+ +IH
Sbjct: 81 YFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 173
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 168
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 169 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 268
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 269 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 169
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 170 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 269
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 270 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
I PS+ T IG G FG V+ + +VA+K +E + + F + EVM +
Sbjct: 24 IDPSELTF---VQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKL 79
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP LV++ C LV E+M G L + L + + L + +D + YL
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 139
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME------------------------ 345
+IH DL + L+ E+ V +SDF GM
Sbjct: 140 ---EEACVIHRDLAARNCLVGENQVIKVSDF--GMTRFVLDDQYTSSTGTKFPVKWASPE 194
Query: 346 ----GQVSTRSDIYGYGIVLMETFTRKK 369
+ S++SD++ +G+++ E F+ K
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR R +A+KV + E A + E+ +RHPN++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL + ++DF + + S R + G
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCG 172
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 142
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 143 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 242
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 243 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 148
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 149 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 248
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 249 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 150
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 151 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 250
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 36 MKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 94
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +V EYMP G+L + Y C + + ++ AT S +EYL
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLD--YLRECNREEVTAVVLLYMATQISSAMEYL---EKK 149
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYG--MEGQVST----------------------- 350
IH DL + L+ E+ V ++DF M G T
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 351 -RSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 210 IKSDVWAFGVLLWEIAT 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ + +VAVK + ++++F + +MK+++H LV++
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 74
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL-EYLYFGHTTPI 317
+ + ++ ++ EYM KGSL + L S + +L ID ++ + E + +
Sbjct: 75 AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNY 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ +VL+ E ++ ++DF EY G + +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T K
Sbjct: 192 SDVWSFGILLYEIVTYGK 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 147
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 148 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 247
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 248 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 145
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 146 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 245
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 246 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 192 PSQATLR--RLSNLIGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEV 245
P Q L + +G G FG+VY AR + +A+KV + E A + E+
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 246 MKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+RHPN++++ + L+LEY P G++ Y L F T
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITEL 117
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
L + H+ +IH D+KP ++LL ++DF + + S R+++ G
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCG 168
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 149
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 150 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 249
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 250 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR ++ +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKKVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG 168
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 254 LVKVISSCSNDDFKALV-LEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + LV L YM G L N + + T + + + ++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 150
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY----------------GMEG- 346
+ +H DL + +LDE ++DF EY +E
Sbjct: 151 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 347 ---QVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 250
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + ++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA-- 149
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 150 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 249
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 250 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 84/215 (39%), Gaps = 48/215 (22%)
Query: 200 LSNLIGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPN 253
L +G G+FG V+ A +D I VAVK A K F + E++ +++H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSS------------TCMLDIFQRLNIMID 301
+VK C D +V EYM G L L + L Q L+I
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--------------------- 340
+ + YL H +H DL + L+ E+++ + DF
Sbjct: 137 IAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKK 369
E M + +T SD++ G+VL E FT K
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 194
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 93 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 185
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LRD +VAVKV + AR F + +
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V + + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 125
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++L+ + DF
Sbjct: 126 CQALN---FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 168
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 194 QATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQ-ECARALKSFEAQCEVMKS 248
+A+ + +IG G G V RLR + VA+K R + F ++ +M
Sbjct: 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ 106
Query: 249 IRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
HPN++++ + +V EYM GSL+ L + I Q + ++ + + Y
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 309 LY-FGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L G+ +H DL +VL+D ++V +SDF
Sbjct: 167 LSDLGY----VHRDLAARNVLVDSNLVCKVSDF 195
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 72
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V E M GSL++ L + Q + ++ S ++
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 133 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 204 IGMGSFGSVYRARL-RDGIEVAVKVF-------HQECARALKSFEAQCEVMKSIRHPNLV 255
IG G FG V++ RL +D VA+K E + F+ + +M ++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ N +V+E++P G L + L + +L +M+D +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 316 PIIHCDLKPISVL---LDED--MVAHLSDFEYGM------------------------EG 346
PI+H DL+ ++ LDE+ + A ++DF E
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 347 QVSTRSDIYGYGIVLMETFTRKKPTD 372
+ ++D Y + ++L T + P D
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 171
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 172
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 173
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 75 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 167
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V E M GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG G+ G+VY A + G EVA++ + + + + VM+ ++PN+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
D +V+EY+ GSL + + + TCM D Q + + LE+L H+ +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCM-DEGQIAAVCRECLQALEFL---HSNQVIHRDI 142
Query: 323 KPISVLLDEDMVAHLSDFEY--GMEGQVSTRSDIYGYGIVLM-ETFTRK 368
K ++LL D L+DF + + + S RS++ G + E TRK
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 194 QATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQ-ECARALKSFEAQCEVMKS 248
+A+ + +IG G G V RLR + VA+K R + F ++ +M
Sbjct: 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ 106
Query: 249 IRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
HPN++++ + +V EYM GSL+ L + I Q + ++ + + Y
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 309 LY-FGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L G+ +H DL +VL+D ++V +SDF
Sbjct: 167 LSDLGY----VHRDLAARNVLVDSNLVCKVSDF 195
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 171
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 173
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQEC---ARALKSFEAQCEVM-KSIRHPNLVKV 257
+IG GSFG V AR + + + AVKV ++ + K ++ V+ K+++HP LV +
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
S D VL+Y+ G L L C L+ R + S L YL H+ I
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYL---HSLNI 160
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG--QVSTRSDIYGYGIVLMETFTRKKPTDR 373
++ DLKP ++LLD L+DF E ST S G L K+P DR
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVMK 247
AT + ++G G FG V RL+ I VA+K V + E R + F + +M
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMG 101
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
HPN++++ + +V E M GSL++ L + Q + ++ S ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR---------- 351
YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 162 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 352 ------------SDIYGYGIVLMETFT 366
SD++ YGIVL E +
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG G+ G+VY A + G EVA++ + + + + VM+ ++PN+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
D +V+EY+ GSL + + + TCM D Q + + LE+L H+ +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCM-DEGQIAAVCRECLQALEFL---HSNQVIHRDI 142
Query: 323 KPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS------DIYGY 357
K ++LL D L+DF Y M +V TR DI+
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 358 GIVLMETFTRKKP 370
GI+ +E + P
Sbjct: 203 GIMAIEMIEGEPP 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCG 168
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG 171
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + S R+ + G
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG 169
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCG 168
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG G+ G+VY A + G EVA++ + + + + VM+ ++PN+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
D +V+EY+ GSL + + + TCM D Q + + LE+L H+ +IH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETCM-DEGQIAAVCRECLQALEFL---HSNQVIHRDI 143
Query: 323 KPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS------DIYGY 357
K ++LL D L+DF Y M +V TR DI+
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 358 GIVLMETFTRKKP 370
GI+ +E + P
Sbjct: 204 GIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG G+ G+VY A + G EVA++ + + + + VM+ ++PN+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
D +V+EY+ GSL + + + TCM D Q + + LE+L H+ +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETCM-DEGQIAAVCRECLQALEFL---HSNQVIHRDI 142
Query: 323 KPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS------DIYGY 357
K ++LL D L+DF Y M +V TR DI+
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 358 GIVLMETFTRKKP 370
GI+ +E + P
Sbjct: 203 GIMAIEMIEGEPP 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 151
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 152 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 251
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 150
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 151 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 250
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 209
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 210 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 309
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 310 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R + G
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCG 169
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 40/206 (19%)
Query: 204 IGMGSFGSVYRARL-RDGIEVAVKVF-------HQECARALKSFEAQCEVMKSIRHPNLV 255
IG G FG V++ RL +D VA+K E + F+ + +M ++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ N +V+E++P G L + L + +L +M+D +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 316 PIIHCDLKPISVL---LDED--MVAHLSDF-----------------------EYGMEGQ 347
PI+H DL+ ++ LDE+ + A ++DF G E +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 348 VST-RSDIYGYGIVLMETFTRKKPTD 372
T ++D Y + ++L T + P D
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 148
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 149 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 248
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 249 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 155
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 156 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 255
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 256 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 303
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 73 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R+ + G
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG 165
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQECARA-LKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 151
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 152 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 251
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 299
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 40/206 (19%)
Query: 204 IGMGSFGSVYRARL-RDGIEVAVKVF-------HQECARALKSFEAQCEVMKSIRHPNLV 255
IG G FG V++ RL +D VA+K E + F+ + +M ++ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ N +V+E++P G L + L + +L +M+D +EY+
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 316 PIIHCDLKPISVL---LDED--MVAHLSDF-----------------------EYGMEGQ 347
PI+H DL+ ++ LDE+ + A ++DF G E +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEE 203
Query: 348 VST-RSDIYGYGIVLMETFTRKKPTD 372
T ++D Y + ++L T + P D
Sbjct: 204 SYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 199 RLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPN 253
+ +IG G FG VY L D I AVK ++ + F + +MK HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 254 LVKVISSCSNDDFKAL-VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
++ ++ C + L VL YM G L N + + T + + + +++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA-- 150
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF-----------------------------EYG 343
+ +H DL + +LDE ++DF E
Sbjct: 151 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 344 MEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLS 403
+ +T+SD++ +G++L E TR P P + D T+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYL 250
Query: 404 GEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLKIRDTL 451
+ + + E C + + ++C E R + ++V+R+ I T
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LRD +VAVKV + AR F + +
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V + + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 125
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++++ + DF
Sbjct: 126 CQALN---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 78 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R + G
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG 170
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LRD +VAVKV + AR F + +
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNA 66
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V + + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 125
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++++ + DF
Sbjct: 126 CQALN---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 69/288 (23%)
Query: 204 IGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV 257
+G G+FG V+ A +D + VAVK + A + F+ + E++ ++H ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYS--------------STCMLDIFQRLNIMIDAT 303
C+ +V EYM G L L S + L + Q L +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV----- 348
+ + YL H +H DL + L+ + +V + DF Y + G+
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 349 ------------STRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEV 396
+T SD++ +G+VL E FT K + W +S E
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSNTEA 269
Query: 397 VDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
+D E + C + + C P++R + KD+ RL
Sbjct: 270 IDCITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 112/289 (38%), Gaps = 81/289 (28%)
Query: 204 IGMGSFGSVYRAR------LRDGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVK 256
IG G+FG V++AR VAVK+ +E + +++ F+ + +M +PN+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS----STCM-------------------LDIF 293
++ C+ L+ EYM G L L S + C L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 294 QRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYG 343
++L I + + YL +H DL + L+ E+MV ++DF Y
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 344 MEG-----------------QVSTRSDIYGYGIVLMETFTRK-KPTDRMFVEELSLKDWV 385
+G + +T SD++ YG+VL E F+ +P M EE+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV------ 285
Query: 386 NNLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKR 434
+ V D +L+ E C L + L C +LP R
Sbjct: 286 -------IYYVRDGNILA-------CPENCPLELYNLMRLCWSKLPADR 320
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R + G
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG 168
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVA----VKVFHQECARALKSFEA--QCEVMKSIRHPNLV 255
+ +G G F +VY+AR ++ ++ +K+ H+ A+ + A + ++++ + HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
++ + + +LV ++M + LE + ++ +L M+ LEYL H
Sbjct: 76 GLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQH 131
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIV 360
I+H DLKP ++LLDE+ V L+DF G+ + + Y + +V
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADF--GLAKSFGSPNRAYXHQVV 174
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G++ Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + S R + G
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCG 171
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 40/208 (19%)
Query: 194 QATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVK---VFHQECARALKSFEAQCEVM 246
+A+ + +IG G FG V RL+ + VA+K V + E R + F + +M
Sbjct: 20 EASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR--RDFLGEASIM 77
Query: 247 KSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL 306
HPN++ + + +V EYM GSL+ L + + Q + ++ ++ +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 307 EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR--------- 351
+YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 138 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 352 -------------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 195 APEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRHPNLVKV-- 257
+G G FG V R +D G +VA+K QE + K+ E C ++MK + HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP--KNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 258 ----ISSCSNDDFKALVLEYMPKGSLENCL--YSSTCMLDIFQRLNIMIDATSTLEYLYF 311
+ + +D L +EY G L L + + C L ++ D +S L YL
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL-- 137
Query: 312 GHTTPIIHCDLKPISVLLD---EDMVAHLSDFEYGME 345
H IIH DLKP +++L + ++ + D Y E
Sbjct: 138 -HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVA---VKVFHQECARALKSFEAQCEVMKSIRHPNL 254
R+ IG G F VYRA L DG+ VA V++F A+A + +++K + HPN+
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY------ 308
+K +S D+ +VLE G L M+ F++ +I + +Y
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSR-------MIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 309 -LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG 343
L H+ ++H D+KP +V + V L D G
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG 183
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 69/288 (23%)
Query: 204 IGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV 257
+G G+FG V+ A +D + VAVK + A + F+ + E++ ++H ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYS--------------STCMLDIFQRLNIMIDAT 303
C+ +V EYM G L L S + L + Q L +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV----- 348
+ + YL H +H DL + L+ + +V + DF Y + G+
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 349 ------------STRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEV 396
+T SD++ +G+VL E FT K + W +S E
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSNTEA 240
Query: 397 VDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
+D E + C + + C P++R + KD+ RL
Sbjct: 241 IDCITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRHPNLVKV-- 257
+G G FG V R +D G +VA+K QE + K+ E C ++MK + HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP--KNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 258 ----ISSCSNDDFKALVLEYMPKGSLENCL--YSSTCMLDIFQRLNIMIDATSTLEYLYF 311
+ + +D L +EY G L L + + C L ++ D +S L YL
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL-- 138
Query: 312 GHTTPIIHCDLKPISVLLD---EDMVAHLSDFEYGME 345
H IIH DLKP +++L + ++ + D Y E
Sbjct: 139 -HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 174
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 203 LIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
++G G++G VY R L + + +A+K + +R + + + K ++H N+V+ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
S + F + +E +P GSL L S L ++ I LE L + H I+H D
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 322 LKPISVLLDE-DMVAHLSDF 340
+K +VL++ V +SDF
Sbjct: 134 IKGDNVLINTYSGVLKISDF 153
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 203 LIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
++G G++G VY R L + + +A+K + +R + + + K ++H N+V+ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
S + F + +E +P GSL L S L ++ I LE L + H I+H D
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 322 LKPISVLLDE-DMVAHLSDF 340
+K +VL++ V +SDF
Sbjct: 148 IKGDNVLINTYSGVLKISDF 167
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIR---------- 250
++IG G V R R G E AVK+ R S E EV ++ R
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL--SPEQLEEVREATRRETHILRQVA 157
Query: 251 -HPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HP+++ +I S + F LV + M KG L + L + + R +IM S LE +
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIM---RSLLEAV 213
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEY 342
F H I+H DLKP ++LLD++M LSDF +
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 49/227 (21%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARLR--DG--IEVAVKVFHQE--CARALKSFE 240
D ++P Q L ++G G FGSV A+L+ DG ++VAVK+ + + ++ F
Sbjct: 16 EDVLIPEQQF--TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 241 AQCEVMKSIRHPNLVKVISSCSNDDFKA------LVLEYMPKGSLENCLYSSTCMLDIFQ 294
+ MK HP++ K++ K ++L +M G L L +S + F
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 295 -----RLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--------- 340
+ M+D +EYL + IH DL + +L EDM ++DF
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 341 EYGMEGQVS------------------TRSDIYGYGIVLMETFTRKK 369
+Y +G S SD++ +G+ + E TR +
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G+ +Y L F T L + H+ +IH
Sbjct: 79 YFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL +++F + + S R+ + G
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG 171
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 69/288 (23%)
Query: 204 IGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV 257
+G G+FG V+ A +D + VAVK + A + F+ + E++ ++H ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYS--------------STCMLDIFQRLNIMIDAT 303
C+ +V EYM G L L S + L + Q L +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV----- 348
+ + YL H +H DL + L+ + +V + DF Y + G+
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 349 ------------STRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEV 396
+T SD++ +G+VL E FT K + W +S E
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQ----LSNTEA 246
Query: 397 VDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
+D E + C + + C P++R + KD+ RL
Sbjct: 247 IDCITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G FG VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 128
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYG--MEGQVST----------------------- 350
IH DL + L+ E+ + ++DF M G T
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 351 -RSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 45/236 (19%)
Query: 185 VSNDGILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQEC 232
++ G P+QA LR L ++G G+FG+VY+ + +G I VA+K+ ++
Sbjct: 20 LTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 233 A-RALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD 291
+A F + +M S+ HP+LV+++ C + + LV + MP G L ++ +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIG 138
Query: 292 IFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------- 340
LN + + YL ++H DL +VL+ ++DF
Sbjct: 139 SQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 341 EYGMEG----------------QVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
EY +G + + +SD++ YG+ + E T KP D + E+
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 251
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG VY+A+ ++ + A KV + L+ + + +++ S HPN+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPIIH 319
++ +++E+ G+++ ML++ + L I + TL+ L + H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK ++L D L+DF
Sbjct: 159 RDLKAGNILFTLDGDIKLADF 179
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + +A+KV + E A + E+ +RHPN++++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P G+ +Y L F T L + H+ +IH
Sbjct: 78 YFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL +++F + + S R+ + G
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCG 170
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG VY+A+ ++ + A KV + L+ + + +++ S HPN+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPIIH 319
++ +++E+ G+++ ML++ + L I + TL+ L + H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK ++L D L+DF
Sbjct: 159 RDLKAGNILFTLDGDIKLADF 179
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +++E+M G+L + Y C + ++ AT S +EYL
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 131
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG VY+A+ ++ + A KV + L+ + + +++ S HPN+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPIIH 319
++ +++E+ G+++ ML++ + L I + TL+ L + H IIH
Sbjct: 105 YENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK ++L D L+DF
Sbjct: 159 RDLKAGNILFTLDGDIKLADF 179
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 46/211 (21%)
Query: 200 LSNLIGMGSFGSVYRARLR--DG--IEVAVKV--FHQECARALKSFEAQCEVMKSIRHPN 253
L ++G G FGSV L+ DG ++VAVK R ++ F ++ MK HPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 254 LVKVISSCSNDDFKAL-----VLEYMPKGSLENCLYSSTC-----MLDIFQRLNIMIDAT 303
+++++ C + + +L +M G L L S + + L M+D
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------EYGMEGQV------ 348
+EYL +H DL + +L +DM ++DF +Y +G++
Sbjct: 158 LGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 349 ------------STRSDIYGYGIVLMETFTR 367
+++SD++ +G+ + E TR
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +++E+M G+L + Y C + ++ AT S +EYL
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ + +VAVK + ++++F + +MK+++H LV++
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL-EYLYFGHTTPI 317
+ + ++ ++ E+M KGSL + L S + +L ID ++ + E + +
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNY 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ +VL+ E ++ ++DF EY G + +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 352 SDIYGYGIVLMETFTRKK 369
S+++ +GI+L E T K
Sbjct: 191 SNVWSFGILLYEIVTYGK 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +++E+M G+L + Y C + ++ AT S +EYL
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 128
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +++E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + +++E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG G+ G+VY A + G EVA++ + + + + VM+ ++PN+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
D +V+EY+ GSL + + + TCM D Q + + LE+L H+ +IH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETCM-DEGQIAAVCRECLQALEFL---HSNQVIHRNI 143
Query: 323 KPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS------DIYGY 357
K ++LL D L+DF Y M +V TR DI+
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 358 GIVLMETFTRKKP 370
GI+ +E + P
Sbjct: 204 GIMAIEMIEGEPP 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVK----VFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
++G G FG + R+ EV V F +E R +F + +VM+ + HPN++K I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLKFI 73
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
D + EY+ G+L + S QR++ D S + YL H+ II
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNII 130
Query: 319 HCDLKPISVLLDEDMVAHLSDF 340
H DL + L+ E+ ++DF
Sbjct: 131 HRDLNSHNCLVRENKNVVVADF 152
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 42/208 (20%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECA-RALKSFEAQCEVMKSI 249
A+ ++ +IG+G FG V RL+ I VA+K + + F ++ +M
Sbjct: 28 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 87
Query: 250 RHPNLVK---VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL 306
HPN++ V++ C ++ EYM GSL+ L + + Q + ++ S +
Sbjct: 88 DHPNIIHLEGVVTKCKP---VMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 144
Query: 307 EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR--------- 351
+YL +H DL ++L++ ++V +SDF E E +TR
Sbjct: 145 KYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 201
Query: 352 -------------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 202 APEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 36/205 (17%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECA-RALKSFEAQCEVMKSI 249
A+ ++ +IG+G FG V RL+ I VA+K + + F ++ +M
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HPN++ + + ++ EYM GSL+ L + + Q + ++ S ++YL
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR------------ 351
+H DL ++L++ ++V +SDF E E +TR
Sbjct: 127 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 352 ----------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE----VAVKVFHQ-ECARALKSFEAQCEVMKSIRHPN 253
++ +IG G FG V R RL+ + VA+K R + F ++ +M HPN
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
++++ +N ++ E+M G+L++ L + + Q + ++ S + YL
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---A 135
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF---------------EYGMEGQVSTR------- 351
+H DL ++L++ ++V +SDF + G++ R
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 352 --------SDIYGYGIVLMETFT 366
SD + YGIV+ E +
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 200 LSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALK---SFEAQCEVMKSIRHPNLV 255
L + +G+G+FG V + G +VAVK+ +++ R+L + + +K RHP+++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ S +V+EY+ G L + + LD + + S ++Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYC---HRH 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP +VLLD M A ++DF
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADF 160
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 45/232 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K+ ++ +A
Sbjct: 1 GTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
F + +M S+ HP+LV+++ C + + LV + MP G L ++ +
Sbjct: 61 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 345 EG----------------QVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
+G + + +SD++ YG+ + E T KP D + E+
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 18/150 (12%)
Query: 200 LSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALK---SFEAQCEVMKSIRHPNLV 255
L + +G+G+FG V + G +VAVK+ +++ R+L + + + +K RHP+++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 256 KVISSCSNDDFKALVLEYMPKGSLEN--CLYSSTCMLD---IFQRLNIMIDATSTLEYLY 310
K+ S +V+EY+ G L + C + ++ +FQ++ +D
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD--------- 125
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ H ++H DLKP +VLLD M A ++DF
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADF 155
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 200 LSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALK---SFEAQCEVMKSIRHPNLV 255
L + +G+G+FG V + G +VAVK+ +++ R+L + + + +K RHP+++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ S +V+EY+ G L + C + + L + + H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP +VLLD M A ++DF
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADF 155
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 36/205 (17%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECA-RALKSFEAQCEVMKSI 249
A+ ++ +IG+G FG V RL+ I VA+K + + F ++ +M
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HPN++ + + ++ EYM GSL+ L + + Q + ++ S ++YL
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR------------ 351
+H DL ++L++ ++V +SDF E E +TR
Sbjct: 133 ---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 352 ----------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 55/265 (20%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VA+K + + +SF + ++MK ++H LV++
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLY 70
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ S + +V EYM KGSL + L L + +++ + + Y+
Sbjct: 71 AVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI---ERMNY 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ ++ ++DF E + G+ + +
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 352 SDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGF-- 409
SD++ +GI+L E T+ + +P M ++ +L ++G+
Sbjct: 187 SDVWSFGILLTELVTKGR-------------------VPYPGMN--NREVLEQVERGYRM 225
Query: 410 VAKEQCVLSILGLAMECAMELPEKR 434
+ C +S+ L + C + PE+R
Sbjct: 226 PCPQDCPISLHELMIHCWKKDPEER 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 38/203 (18%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE----VAVKVFHQ-ECARALKSFEAQCEVMKSIRHPN 253
++ +IG G FG V R RL+ + VA+K R + F ++ +M HPN
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
++++ +N ++ E+M G+L++ L + + Q + ++ S + YL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---A 133
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF---------------EYGMEGQVSTR------- 351
+H DL ++L++ ++V +SDF + G++ R
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 352 --------SDIYGYGIVLMETFT 366
SD + YGIV+ E +
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 131
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 197 LRRLSNLIGMGSFGSVYRARL-----RDGIEVAVKVFHQECA-RALKSFEAQCEVMKSIR 250
L+R+ +L G G FG V R G +VAVK E + + + E+++++
Sbjct: 11 LKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 251 HPNLVKVISSCSNDDFKA--LVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
H N+VK C+ D L++E++P GSL+ L + +++ Q+L + ++Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------------- 340
L + +H DL +VL++ + + DF
Sbjct: 130 L---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 341 EYGMEGQVSTRSDIYGYGIVLMETFT 366
E M+ + SD++ +G+ L E T
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 77
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 40/206 (19%)
Query: 197 LRRLSNLIGMGSFGSVYRARL-----RDGIEVAVKVFHQECA-RALKSFEAQCEVMKSIR 250
L+R+ +L G G FG V R G +VAVK E + + + E+++++
Sbjct: 23 LKRIRDL-GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 81
Query: 251 HPNLVKVISSCSNDDFKA--LVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
H N+VK C+ D L++E++P GSL+ L + +++ Q+L + ++Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------------- 340
L + +H DL +VL++ + + DF
Sbjct: 142 L---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 341 EYGMEGQVSTRSDIYGYGIVLMETFT 366
E M+ + SD++ +G+ L E T
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS-SC 261
+IG GSFG V++A+L + EVA+K Q+ + K+ E Q +M+ ++HPN+V + +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD--KRFKNRELQ--IMRIVKHPNVVDLKAFFY 102
Query: 262 SNDD-----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
SN D F LVLEY+P+ + + + L I + L L + H+
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 317 IIHCDLKPISVLLD 330
I H D+KP ++LLD
Sbjct: 162 ICHRDIKPQNLLLD 175
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 81 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ + + ++DF EY G + +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 128
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 70 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ + + ++DF EY G + +
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 186 SDVWSFGILLTEIVTHGR 203
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 77
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 80 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ + + ++DF EY G + +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 196 SDVWSFGILLTEIVTHGR 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 30 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 88
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 143
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 204 IKSDVWAFGVLLWEIAT 220
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 75 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ + + ++DF EY G + +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK +E ++ F + VMK I+HPNLV+++
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 79
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 134
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 195 IKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 85 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH DL+ ++L+ + + ++DF EY G + +
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 201 SDVWSFGILLTEIVTHGR 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK ++ ++ F + VMK I+HPNLV+++
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 135
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH DL + L+ E+ + ++DF E + S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
RL IG G+F V AR + G EVAVK+ Q + +L+ + + K + HPN+V
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIV 76
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
K+ + LV EY G + + L + + R S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYC---HQK 132
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
I+H DLK ++LLD D ++DF + E + D +
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF 172
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 203 LIG-MGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISS 260
+IG +G FG VY+A+ ++ + A KV + L+ + + +++ S HPN+VK++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTPI 317
++ +++E+ G+++ ML++ + L I + TL+ L + H I
Sbjct: 76 FYYENNLWILIEFCAGGAVD------AVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 318 IHCDLKPISVLLDEDMVAHLSDF 340
IH DLK ++L D L+DF
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADF 152
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+ LIG G FG VY R + + + ++ LK+F+ + + RH N+V +
Sbjct: 37 IGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+C + A++ +L + + + +LD+ + I + + YL H I+H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILH 153
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLK +V D V ++DF
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDF 173
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 125
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDF 151
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 126
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDF 152
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 128
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDF 154
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
++ NL+G GSF VYRA + G+EVA+K+ ++ A ++ + + ++ ++HP++
Sbjct: 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSI 73
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+++ + + ++ LVLE G + L + + + M + + YL H+
Sbjct: 74 LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---HS 130
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
I+H DL ++LL +M ++DF
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADF 156
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 153
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDF 179
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 151
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDF 177
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 127
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDF 153
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 151
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDF 177
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 147
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDF 173
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 147
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDF 173
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 6 DFSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLDVASL 65
D S N LEG S+ G+ K +I+L++N+L+ D+ G + L +L
Sbjct: 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-----GKVGLS-----------KNL 246
Query: 66 EILNLSNNEIYGLIPTXXXXXXXXXXXXXXFNKLEGEILRGGPFVNFTAMSFKGNEPLCG 125
L+L NN IYG +P FN L GEI +GG F ++ N+ LCG
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 126 SPNLQVPPC 134
SP +P C
Sbjct: 307 SP---LPAC 312
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 10 NSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKL------DVA 63
N+L GP+ I L + + ++ N+S +P + + +L TL +YN L ++
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 64 SLEIL---NLSNNEIYGLIP 80
SL L N I G IP
Sbjct: 147 SLPNLVGITFDGNRISGAIP 166
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 132
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDF 158
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LR +VAVKV + AR F + +
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA 66
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V ++ + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 125
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++++ + DF
Sbjct: 126 CQALN---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 76 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 192 SDVWSFGILLTEIVTHGR 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVIS 259
IG GSFG V + + G A+K+ ++ LK E + +++++ P LVK+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS---TLEYLYFGHTTP 316
S ++ +V+EYMP G ++S + F + A T EYL H+
Sbjct: 109 SFKDNSNLYMVMEYMPGGD----MFSHLRRIGRFSEPHARFYAAQIVLTFEYL---HSLD 161
Query: 317 IIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
+I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF--GFAKRVKGRT 195
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 150
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 77 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 132
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 193 SDVWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 75 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + VA+KV + E + E+ + HPN++++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LEY P+G L L S C D + IM + L Y H +IH
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYC---HGKKVIH 146
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++LL ++DF + + R + G
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCG 183
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 83 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 199 SDVWSFGILLTEIVTHGR 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVIS 259
IG GSFG V + + G A+K+ ++ LK E + +++++ P LVK+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS---TLEYLYFGHTTP 316
S ++ +V+EYMP G ++S + F + A T EYL H+
Sbjct: 109 SFKDNSNLYMVMEYMPGGD----MFSHLRRIGRFSEPHARFYAAQIVLTFEYL---HSLD 161
Query: 317 IIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
+I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF--GFAKRVKGRT 195
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 104/295 (35%), Gaps = 71/295 (24%)
Query: 199 RLSNLIGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKS-FEAQCEVMKSIRH 251
R +G FG VY+ L VA+K + L+ F + + ++H
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 88
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR---------------L 296
PN+V ++ + D +++ Y G L L + D+ +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 297 NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------- 340
+++ + +EYL H ++H DL +VL+ + + +SD
Sbjct: 149 HLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 341 -----------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLL 389
E M G+ S SDI+ YG+VL E F+ L
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------------------YGLQ 246
Query: 390 PISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
P D + ++ + C + L +EC E P +R KDI +RL
Sbjct: 247 PYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 84 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 200 SDVWSFGILLTEIVTHGR 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 71 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDF---------EYGME-----------------GQVSTR 351
IH +L+ ++L+ + + ++DF EY G + +
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 187 SDVWSFGILLTEIVTHGR 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 104/295 (35%), Gaps = 71/295 (24%)
Query: 199 RLSNLIGMGSFGSVYRARL------RDGIEVAVKVFHQECARALKS-FEAQCEVMKSIRH 251
R +G FG VY+ L VA+K + L+ F + + ++H
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR---------------L 296
PN+V ++ + D +++ Y G L L + D+ +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 297 NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------- 340
+++ + +EYL H ++H DL +VL+ + + +SD
Sbjct: 132 HLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 341 -----------EYGMEGQVSTRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLL 389
E M G+ S SDI+ YG+VL E F+ L
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------------------YGLQ 229
Query: 390 PISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRL 444
P D + ++ + C + L +EC E P +R KDI +RL
Sbjct: 230 PYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 117/302 (38%), Gaps = 68/302 (22%)
Query: 190 ILPSQATLRRLSNLIGMGSFGSVYRARLRDG-----IEVAVKVFHQECARALK-SFEAQC 243
I PS T +++ IG G FG VY+ L+ + VA+K + F +
Sbjct: 41 IHPSCVTRQKV---IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 97
Query: 244 EVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT 303
+M H N++++ S ++ EYM G+L+ L + Q + ++
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIA 157
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------EYGMEG----- 346
+ ++YL +H DL ++L++ ++V +SDF Y G
Sbjct: 158 AGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 347 -----------QVSTRSDIYGYGIVLMETFTR-KKPTDRMFVEELSLKDWVNNLLPISLM 394
+ ++ SD++ +GIV+ E T ++P
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP----------------------YW 252
Query: 395 EVVDKTLLSGEKKGFV--AKEQCVLSILGLAMECAMELPEKRINAKDIVT---RLLKIRD 449
E+ + ++ GF C +I L M+C + +R DIV+ +L++ D
Sbjct: 253 ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
Query: 450 TL 451
+L
Sbjct: 313 SL 314
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 81 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G FG V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 75 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK +E ++ F + VMK I+HPNLV+++
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 334
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH +L + L+ E+ + ++DF E + S
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 395 IKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK +E ++ F + VMK I+HPNLV+++
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVNAVVLLYMATQISSAMEYL---EKK 376
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH +L + L+ E+ + ++DF E + S
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 437 IKSDVWAFGVLLWEIAT 453
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVF-HQECARALKSFE-AQCEVMKSIRHPNLVKVISS 260
IG GS+G V++ R RD G VA+K F E +K + ++K ++HPNLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR---LNIMIDAT-STLEYLYFGHTTP 316
LV EY C ++ LD +QR +++ T TL+ + F H
Sbjct: 71 FRRKRRLHLVFEY--------CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 317 IIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
IH D+KP ++L+ + V L DF G ++ SD Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDF--GFARLLTGPSDYY 159
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LR +VAVKV + AR F + +
Sbjct: 7 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA 66
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V + + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 125
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++++ + DF
Sbjct: 126 CQALN---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+ + +G G +G VY + + VAVK +E ++ F + VMK I+HPNLV+++
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTT 315
C+ + ++ E+M G+L + Y C + ++ AT S +EYL
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLD--YLRECNRQEVSAVVLLYMATQISSAMEYL---EKK 337
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVS 349
IH +L + L+ E+ + ++DF E + S
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 350 TRSDIYGYGIVLMETFT 366
+SD++ +G++L E T
Sbjct: 398 IKSDVWAFGVLLWEIAT 414
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 41/216 (18%)
Query: 192 PSQATLR-RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK---SFEAQCEVM 246
PS + R L ++G G V+ AR LR +VAVKV + AR F + +
Sbjct: 24 PSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA 83
Query: 247 KSIRHPNLVKVISSCSNDD----FKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++ HP +V V + + +V+EY+ +L + +++ M + + ++ DA
Sbjct: 84 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIADA 142
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------------------- 340
L F H IIH D+KP ++++ + DF
Sbjct: 143 CQALN---FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 341 ------EYGMEGQVSTRSDIYGYGIVLMETFTRKKP 370
E V RSD+Y G VL E T + P
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 42/208 (20%)
Query: 195 ATLRRLSNLIGMGSFGSVYRARL-----RDGIEVAVK---VFHQECARALKSFEAQCEVM 246
A+ ++ +IG G FG V RL RD + VA+K V + E R + F + +M
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRD-VAVAIKTLKVGYTEKQR--RDFLCEASIM 98
Query: 247 KSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTL 306
HPN+V + + +V+E+M G+L+ L + Q + ++ + +
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 307 EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFE------------YGMEG-------- 346
YL +H DL ++L++ ++V +SDF Y G
Sbjct: 159 RYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 347 --------QVSTRSDIYGYGIVLMETFT 366
+ ++ SD++ YGIV+ E +
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF +V AR L E A+K+ + + + +VM + HP
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ +D+ L Y G L + + R + S LEYL H
Sbjct: 100 VKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 155
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDF 181
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNL 254
+ ++G GSF + AR L E A+K+ + + + +VM + HP
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+ + +D+ L Y G L + + R + S LEYL H
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL---HG 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH DLKP ++LL+EDM ++DF
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 15/146 (10%)
Query: 5 FDFSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLDVAS 64
D S N L G + +IG++ + +NL N++S +P +G L L L L+ NKLD
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD--- 690
Query: 65 LEILNLSNNEIYGLIPTXXXXXXXXXXXXXXFNKLEGEILRGGPFVNFTAMSFKGNEPLC 124
G IP N L G I G F F F N LC
Sbjct: 691 ------------GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 738
Query: 125 GSPNLQVPPCKLNKPGKHQKSRKNML 150
G P + P + HQ+S L
Sbjct: 739 GYPLPRCDPSNADGYAHHQRSHGRRL 764
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 10 NSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLD-------- 61
N LEG + ++ +K + + L N+L+ ++P+ + +L +SL+ N+L
Sbjct: 449 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 62 -VASLEILNLSNNEIYGLIPT 81
+ +L IL LSNN G IP
Sbjct: 509 RLENLAILKLSNNSFSGNIPA 529
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 7 FSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYN 58
S+N L G + IG L+ + + LS N+ S ++PA +G SL L L N
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 2 ILNFDFSSNSLEGPLSLDIGNL-----KAVVEINLSRNNLSSDMPATIGGLISLKTLSLA 56
+L D SSN+ GP+ + NL + E+ L N + +P T+ L +L L+
Sbjct: 367 LLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 57 YNKLDVASLEILNLSNNEIYGLIPTXXXXXXXXXXXXXXFNKLEGEI 103
+N L G IP+ N LEGEI
Sbjct: 424 FNYLS---------------GTIPSSLGSLSKLRDLKLWLNMLEGEI 455
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVY---RARLRDGIE--VAVKVFHQECARALKS-FE 240
+D + + L+++ +L G G FG V DG VAVK + C L+S ++
Sbjct: 1 SDPTVFHKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ 59
Query: 241 AQCEVMKSIRHPNLVKVISSCSNDDFKA--LVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ E+++++ H ++VK C + K+ LV+EY+P GSL + L L +
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-----AQL 114
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
++ A E + + H IH L +VLLD D + + DF
Sbjct: 115 LLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 156
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 54 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 168
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 169 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 197 LRRLSNLIGMGSFGSVY---RARLRDGIE--VAVKVFHQECARALKS-FEAQCEVMKSIR 250
L+++ +L G G FG V DG VAVK + C L+S ++ + E+++++
Sbjct: 10 LKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 251 HPNLVKVISSCSNDDFKA--LVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
H ++VK C + K+ LV+EY+P GSL + L L +++ A E
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL-----AQLLLFAQQICEG 123
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ + H IH L +VLLD D + + DF
Sbjct: 124 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDF 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R + G+E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+ F LV + + G L+ + + + LE + + H+ I+H
Sbjct: 97 IQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 152
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQVSTRSDIYGYG 358
+LKP ++LL + L+DF G+ +V+ +G+
Sbjct: 153 NLKPENLLLASKAKGAAVKLADF--GLAIEVNDSEAWHGFA 191
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 26 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + + L + R
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQI 143
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 144 VLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 188
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 26 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 140
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 141 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 188
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + + L + R
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQI 150
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 151 VLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVIS 259
IG GSFG V + + G A+K+ ++ LK E + +++++ P LVK+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS---TLEYLYFGHTTP 316
S ++ +V+EY+P G + +S + F + A T EYL H+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYL---HSLD 161
Query: 317 IIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
+I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF--GFAKRVKGRT 195
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 19 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 77
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 133
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 134 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 181
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 203 LIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVIS 259
L+G GS+G V + R +D G VA+K F + + A E+ +K +RH NLV ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 260 SCSNDDFKALVLEYMPKGSLENC-LYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
C LV E++ L++ L+ + + Q+ I + + F H+ II
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----INGIGFCHSHNII 146
Query: 319 HCDLKPISVLLDEDMVAHLSDFEYG 343
H D+KP ++L+ + V L DF +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GS+GSVY+A ++ G VA+K E L+ + +M+ P++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ +V+EY GS+ + + L + I+ LEYL+F IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 323 KPISVLLDEDMVAHLSDFEYGMEGQVS 349
K ++LL+ + A L+DF G+ GQ++
Sbjct: 152 KAGNILLNTEGHAKLADF--GVAGQLT 176
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 50/230 (21%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVM 246
+ G++P + +L + G FG V++A+L + VAVK+F + ++ +S E +
Sbjct: 8 SSGLVPRGSL--QLLEIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFST 63
Query: 247 KSIRHPNLVKVISS---CSNDDFK-ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++H NL++ I++ SN + + L+ + KGSL + L + + + ++
Sbjct: 64 PGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWN--ELCHVAETM 121
Query: 303 TSTLEYLYF--------GHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---------- 344
+ L YL+ GH I H D K +VLL D+ A L+DF +
Sbjct: 122 SRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD 181
Query: 345 -EGQVSTRS---------------------DIYGYGIVLMETFTRKKPTD 372
GQV TR D+Y G+VL E +R K D
Sbjct: 182 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 45/232 (19%)
Query: 189 GILPSQATLR-------RLSNLIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR R ++G G+FG+VY+ + DG I VA+KV + + +A
Sbjct: 3 GAAPNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM + P + +++ C + LV + MP G L + + + L
Sbjct: 63 NKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCMQIAKGMSYL---EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 345 EG----------------QVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
+G + + +SD++ YG+ + E T KP D + E+
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 186 SNDGILPSQATLRRLSNLIGMGSFGSVY---RARLRDGIE--VAVKVFHQECARALKS-F 239
++D + + L+++ +L G G FG V DG VAVK +C +S +
Sbjct: 5 ASDPTVFHKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 240 EAQCEVMKSIRHPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSSTCMLDIFQRLN 297
+ + ++++++ H +++K C + K+L V+EY+P GSL + L + L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL-----AQ 118
Query: 298 IMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+++ A E + + H+ IH +L +VLLD D + + DF
Sbjct: 119 LLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDF 161
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCE---VMKSIRHPNLVKVIS 259
+G GSFG V+ R R +G A+KV +E LK E + ++ + HP ++++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ + ++++Y+ G L + L S + + + LEYL H+ II+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYL---HSKDIIY 129
Query: 320 CDLKPISVLLDEDMVAHLSDFEYG 343
DLKP ++LLD++ ++DF +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFA 153
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R + G+E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+ F LV + + G L+ + + + LE + + H+ I+H
Sbjct: 74 IQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQVSTRSDIYGYG 358
+LKP ++LL + L+DF G+ +V+ +G+
Sbjct: 130 NLKPENLLLASKAKGAAVKLADF--GLAIEVNDSEAWHGFA 168
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVISSC 261
+G G++G VY+A+ G VA+K + A E+ +K + HPN+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
++ LV E+M K L+ L + L Q I I L + H I+H D
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
LKP ++L++ D L+DF + RS Y + +V +
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTL 183
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R + G+E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+ F LV + + G L+ + + + LE + + H+ I+H
Sbjct: 74 IQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQVSTRSDIYGYG 358
+LKP ++LL + L+DF G+ +V+ +G+
Sbjct: 130 NLKPENLLLASKAKGAAVKLADF--GLAIEVNDSEAWHGFA 168
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 199 RLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQ-ECARALKSFEAQCEVMKSIRHPN 253
++ +IG G FG V L+ I VA+K + + F ++ +M HPN
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
++ + + ++ E+M GSL++ L + + Q + ++ + ++YL
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---A 152
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF---------------EYGMEGQVSTR------- 351
+H DL ++L++ ++V +SDF + G++ R
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 352 --------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R + G+E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+ F LV + + G L+ + + + LE + + H+ I+H
Sbjct: 73 IQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHR 128
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQVSTRSDIYGYG 358
+LKP ++LL + L+DF G+ +V+ +G+
Sbjct: 129 NLKPENLLLASKAKGAAVKLADF--GLAIEVNDSEAWHGFA 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVISSC 261
+G G++G VY+A+ G VA+K + A E+ +K + HPN+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
++ LV E+M K L+ L + L Q I I L + H I+H D
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
LKP ++L++ D L+DF + RS Y + +V +
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTL 183
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARA-LKSFEAQCEVMKSIRHPNLVKVISSC 261
+G G+FG V+ R G+E +K +++ ++ ++ EA+ EV+KS+ HPN++K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
+ +V+E G L + S+ + + L + H+ ++H D
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKD 149
Query: 322 LKPISVLLDE 331
LKP ++L +
Sbjct: 150 LKPENILFQD 159
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 20 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 78
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 134
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+DE ++DF G +V R+
Sbjct: 135 AQIVLTFEYL---HSLDLIYRDLKPENLLIDEQGYIQVTDF--GFAKRVKGRT 182
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q +A K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYF 311
SS D + LVL+Y+P+ + S L + M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI-- 138
Query: 312 GHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 -HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIRTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+ +++ P LVK+ S ++ +VLEY P G + +S + F + A
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIKVADF--GFAKRVKGRT 196
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G+ +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIQVTDF--GLAKRVKGRT 195
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q +A K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYF 311
SS D + LVL+Y+P+ + S L + M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI-- 138
Query: 312 GHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 -HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 186 SNDGILPSQATLRRLSNLIGMGSFGSVY---RARLRDGIE--VAVKVFHQECARALKS-F 239
++D + + L+++ +L G G FG V DG VAVK +C +S +
Sbjct: 5 ASDPTVFHKRYLKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 240 EAQCEVMKSIRHPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSSTCMLDIFQRLN 297
+ + ++++++ H +++K C + K+L V+EY+P GSL + L + L
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL-----AQ 118
Query: 298 IMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+++ A E + + H IH +L +VLLD D + + DF
Sbjct: 119 LLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDF 161
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 45/236 (19%)
Query: 186 SNDGILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA 233
S G P+QA LR L ++G G+FG+VY+ + +G I VA+K + +
Sbjct: 2 SPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 61
Query: 234 -RALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+A K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 62 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS 120
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------E 341
LN + + YL ++H DL +VL+ ++DF E
Sbjct: 121 QYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
Query: 342 YGMEGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
Y EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 178 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G+ +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GLAKRVKGRT 195
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q +A K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ--GKAFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P + S + I+ +L M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 138
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 32/198 (16%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L +G G G V+ +VAVK Q + + +F A+ +MK ++H LV++
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID-ATSTLEYLYFGHTTPI 317
+ + + ++ EYM GSL + L + + I +N ++D A E + F
Sbjct: 75 AVVTQEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF--------------------------EYGMEGQVSTR 351
IH DL+ ++L+ + + ++DF E G + +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 352 SDIYGYGIVLMETFTRKK 369
SD++ +GI+L E T +
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R ++ G E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
S + F LV + + G L+ + + + LE + H I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQ 347
DLKP ++LL + L+DF +E Q
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 195
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY P G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 195
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + + +A+KV + E + E+ +RHPN++++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LE+ P+G L L D + M + L Y H +IH
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYC---HERKVIH 138
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++L+ ++DF + + R + G
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 175
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 194 QATLRR---LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI- 249
Q T+ R L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++
Sbjct: 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVM 92
Query: 250 -RHPNLVKVISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS 304
RH N++ I++ + D+ LV +Y GSL + L T ++ + + + S
Sbjct: 93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS 150
Query: 305 TLEYLYF----GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
L +L+ P I H DLK ++L+ ++ ++D
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + + +A+KV + E + E+ +RHPN++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LE+ P+G L L D + M + L Y H +IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYC---HERKVIH 137
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++L+ ++DF + + R + G
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 174
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQ---ECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG+VY AR + + +A+KV + E + E+ +RHPN++++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ L+LE+ P+G L L D + M + L Y H +IH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYC---HERKVIH 137
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYG 356
D+KP ++L+ ++DF + + R + G
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG 174
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 194 QATLRR---LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI- 249
Q T+ R L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++
Sbjct: 24 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVM 79
Query: 250 -RHPNLVKVISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS 304
RH N++ I++ + D+ LV +Y GSL + L T ++ + + + S
Sbjct: 80 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS 137
Query: 305 TLEYLYF----GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
L +L+ P I H DLK ++L+ ++ ++D
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 178
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 28 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 86
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + + L + R
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQI 145
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 146 VLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 190
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 200 LSNLIGMGSFGSVYRA-----RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNL 254
L N IG GS+G V A R+R + K F ++ R F+ + E+MKS+ HPN+
Sbjct: 30 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNI 85
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYF 311
+++ + ++ LV+E G L+ +F+ + IM D S + Y
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYC-- 139
Query: 312 GHTTPIIHCDLKPISVLLDED 332
H + H DLKP + L D
Sbjct: 140 -HKLNVAHRDLKPENFLFLTD 159
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL 120
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 121 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARLRDG----IEVAVKVFHQECA-RALKSFEA 241
D ++P + + +IG G FG VY D I+ A+K + + +++F
Sbjct: 12 KDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR 71
Query: 242 QCEVMKSIRHPNLVKVIS-SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMI 300
+ +M+ + HPN++ +I + ++L YM G L + S + ++ +
Sbjct: 72 EGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL 131
Query: 301 DATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---------EY--------- 342
+EYL +H DL + +LDE ++DF EY
Sbjct: 132 QVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 343 -------GMEG----QVSTRSDIYGYGIVLMETFTRKKPTDR 373
+E + +T+SD++ +G++L E TR P R
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R ++ G E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
S + F LV + + G L+ + + + LE + H I+H
Sbjct: 72 ISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 321 DLKPISVLL---DEDMVAHLSDFEYGMEGQ 347
DLKP ++LL + L+DF +E Q
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 200 LSNLIGMGSFGSVYRA-----RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNL 254
L N IG GS+G V A R+R + K F ++ R F+ + E+MKS+ HPN+
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNI 68
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYF 311
+++ + ++ LV+E G L+ +F+ + IM D S + Y
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYC-- 122
Query: 312 GHTTPIIHCDLKPISVLLDED 332
H + H DLKP + L D
Sbjct: 123 -HKLNVAHRDLKPENFLFLTD 142
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 123 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI--RHPNLVKV 257
L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++ RH N++
Sbjct: 13 LQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF 68
Query: 258 ISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF-- 311
I++ + D+ LV +Y GSL + L T ++ + + + S L +L+
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEI 126
Query: 312 --GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
P I H DLK ++L+ ++ ++D
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 158
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 34 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 196
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI--RHPNLVKV 257
L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++ RH N++
Sbjct: 10 LQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF 65
Query: 258 ISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF-- 311
I++ + D+ LV +Y GSL + L T ++ + + + S L +L+
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEI 123
Query: 312 --GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
P I H DLK ++L+ ++ ++D
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 155
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 54 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + + L + R
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQI 171
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 172 VLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 62 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 120
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 121 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI--RHPNLVKV 257
L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++ RH N++
Sbjct: 8 LQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF 63
Query: 258 ISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF-- 311
I++ + D+ LV +Y GSL + L T ++ + + + S L +L+
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEI 121
Query: 312 --GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
P I H DLK ++L+ ++ ++D
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 153
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI--RHPNLVKV 257
L IG G FG V+R + R G EVAVK+F +R +S+ + E+ +++ RH N++
Sbjct: 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGF 62
Query: 258 ISSCSNDDFK----ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF-- 311
I++ + D+ LV +Y GSL + L T ++ + + + S L +L+
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEI 120
Query: 312 --GHTTP-IIHCDLKPISVLLDEDMVAHLSDF 340
P I H DLK ++L+ ++ ++D
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 88
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 146
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 147 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 92
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 150
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 151 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 99
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 157
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 158 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 92
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 150
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 151 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYF 311
SS D + LVL+Y+P+ + S L + M +L Y+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI-- 138
Query: 312 GHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 -HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 114
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 172
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 173 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 138
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 159
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 217
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 218 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 93
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 151
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 152 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 118
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 176
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 177 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 81
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 139
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 140 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 138
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 84
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 142
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 143 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 38/204 (18%)
Query: 199 RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFH---QECARALKSFEAQCEVMKSIRHPNL 254
++ + +G G +VY A I+VA+K +E LK FE + + H N+
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
V +I DD LV+EY+ +L + S L + +N L+ + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINF---TNQILDGIKHAHD 129
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS---------------------- 352
I+H D+KP ++L+D + L F++G+ +S S
Sbjct: 130 MRIVHRDIKPQNILIDSNKT--LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 353 ------DIYGYGIVLMETFTRKKP 370
DIY GIVL E + P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 85
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 143
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 144 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 80
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATSTLEYLYF 311
SS D + LVL+Y+P+ + S L + M +L Y+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI-- 138
Query: 312 GHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 139 -HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 54 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 168
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG 343
T EYL H+ +I+ DLKP ++L+D+ ++DF +
Sbjct: 169 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 108
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 166
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 167 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 116
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 174
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 175 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 25/172 (14%)
Query: 198 RRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFH---QECARALKSFEAQCEVMKSI 249
+RL L +G G++GSV Y ARLR +VAVK Q A +++ + ++K +
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 84
Query: 250 RHPNLVKVIS----SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+H N++ ++ + S +DF + L G+ N + S + D + + ++
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD--EHVQFLV--YQL 140
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
L L + H+ IIH DLKP +V ++ED + DF + M G V+TR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 201 SNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV-- 257
+ +IG GSFG VY+A+L D E VA+K Q+ + K+ E Q +M+ + H N+V++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--KRFKNRELQ--IMRKLDHCNIVRLRY 114
Query: 258 --ISSCSNDD--FKALVLEYMPKGSLENCLYSSTC---MLDIFQRLNIMIDATSTLEYLY 310
SS D + LVL+Y+P+ + S + I+ +L M +L Y+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYI- 172
Query: 311 FGHTTPIIHCDLKPISVLLDEDM-VAHLSDF 340
H+ I H D+KP ++LLD D V L DF
Sbjct: 173 --HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 192 PSQATLR-----RLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA---Q 242
PSQ T + R+ L G GSFG V + ++ G A+K+ ++ LK E +
Sbjct: 33 PSQNTAQLDQFDRIKTL-GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLIIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 192 PSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RALKS 238
P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A K
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ VM S+ +P++ +++ C + L+++ MP G L + + + LN
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGMEGQ 347
+ + YL ++H DL +VL+ ++DF EY EG
Sbjct: 127 CVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 348 ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
+ +SD++ YG+ + E T KP D + E+S
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 45/239 (18%)
Query: 183 LDVSNDGILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQ 230
L G P+QA LR L ++G G+FG+VY+ + +G I VA+K +
Sbjct: 20 LYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 79
Query: 231 ECA-RALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCM 289
+ +A K + VM S+ +P++ +++ C + L+ + MP G L + +
Sbjct: 80 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN 138
Query: 290 LDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF--------- 340
+ LN + + YL ++H DL +VL+ ++DF
Sbjct: 139 IGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 341 --EYGMEGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EY EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 196 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 33 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P LVK+ S ++ +V+EY+ G + +S + F + A
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYA 147
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++L+D+ ++DF G +V R+
Sbjct: 148 AQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDF--GFAKRVKGRT 195
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P L K+ S ++ +V+EY P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 196
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+K+ + E AL + E + E++K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 125 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P L K+ S ++ +V+EY P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 196
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+K+ + E AL + E + E++K +
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 72 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 123
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 124 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 127 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 192 PSQAT-----LRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSFEA---Q 242
P+Q T R+ L G GSFG V + + G A+K+ ++ LK E +
Sbjct: 34 PAQNTAHLDQFERIKTL-GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 243 CEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
+++++ P L K+ S ++ +V+EY P G + +S + F + A
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYA 148
Query: 303 TS---TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
T EYL H+ +I+ DLKP ++++D+ ++DF G +V R+
Sbjct: 149 AQIVLTFEYL---HSLDLIYRDLKPENLMIDQQGYIKVTDF--GFAKRVKGRT 196
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+K+ + E AL + E + E++K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 125 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 123 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 123 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 63 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 121
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 122 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+K+ + E AL + E + E++K +
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 73 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 125 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 127 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+K+ + E AL + E + E++K +
Sbjct: 20 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL-NVETEIEILKKL 78
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 79 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 130
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 131 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 7 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 125
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 126 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 83/203 (40%), Gaps = 38/203 (18%)
Query: 199 RLSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQ-ECARALKSFEAQCEVMKSIRHPN 253
++ +IG G FG V L+ I VA+K + + F ++ +M HPN
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
++ + + ++ E+M GSL++ L + + Q + ++ + ++YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---A 126
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF---------------EYGMEGQVSTR------- 351
+H L ++L++ ++V +SDF + G++ R
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 352 --------SDIYGYGIVLMETFT 366
SD++ YGIV+ E +
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 64 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 122
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 123 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 26/169 (15%)
Query: 203 LIGMGSFGSVYRAR--LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHP-------- 252
++G G+FG V +AR L K+ H E L + ++ ++ S+ H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 253 -----NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATST 305
N VK +++ + +EY G+L + ++S D + RL I
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI----- 125
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
LE L + H+ IIH DLKP+++ +DE + DF G+ V DI
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF--GLAKNVHRSLDI 172
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARL-----RDGIEVAVKVFHQECARALKSFEA 241
D + + L+ +S L G G+FGSV R G VAVK + F+
Sbjct: 2 QDPTIFEERHLKYISQL-GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 60
Query: 242 QCEVMKSIRHPNLVKV--ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM 299
+ +++K++ +VK +S LV+EY+P G C+ D QR
Sbjct: 61 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG----------CLRDFLQRHRAR 110
Query: 300 IDATSTLEYL--------YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------E 341
+DA+ L Y Y G + +H DL ++L++ + ++DF +
Sbjct: 111 LDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169
Query: 342 YGM---EGQ---------------VSTRSDIYGYGIVLMETFT 366
Y + GQ S +SD++ +G+VL E FT
Sbjct: 170 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 204 IGMGSFGSVYRARLRDGIEV-AVKVFH-QECAR--ALKSFEAQCEVMKSIRHPNLVKVIS 259
IG GSFG V + D ++ A+K + Q+C +++ + ++M+ + HP LV +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
S +++ +V++ + G L L + + +L + + L+YL IIH
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYL---QNQRIIH 138
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGM----EGQVSTRSDIYGYGIVLMETFTRKK 369
D+KP ++LLDE H++DF E Q++T + Y + E F+ +K
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY--MAPEMFSSRK 190
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 55/227 (24%)
Query: 183 LDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARL-----RDGIEVAVKVFHQECARALK 237
L D + + L+ +S L G G+FGSV R G VAVK +
Sbjct: 11 LYACQDPTIFEERHLKYISQL-GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 238 SFEAQCEVMKSIRHPNLVKV--ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
F+ + +++K++ +VK +S LV+EY+P G C+ D QR
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG----------CLRDFLQR 119
Query: 296 LNIMIDATSTLEYL--------YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------- 340
+DA+ L Y Y G + +H DL ++L++ + ++DF
Sbjct: 120 HRARLDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 341 ---EYGM---EGQ---------------VSTRSDIYGYGIVLMETFT 366
+Y + GQ S +SD++ +G+VL E FT
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA--QCEVMKSIRHPNLVKVISS 260
IG G+FG V++AR R G +VA+K E + A + ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 261 CSN-----DDFKALVL------EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
C + KA + E+ G L N L T L +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT--LSEIKRVMQML-----LNGL 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
Y+ H I+H D+K +VL+ D V L+DF
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADF 169
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 55/223 (24%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARL-----RDGIEVAVKVFHQECARALKSFEA 241
D + + L+ +S L G G+FGSV R G VAVK + F+
Sbjct: 3 QDPTIFEERHLKYISQL-GKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR 61
Query: 242 QCEVMKSIRHPNLVKV--ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM 299
+ +++K++ +VK +S LV+EY+P G C+ D QR
Sbjct: 62 EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG----------CLRDFLQRHRAR 111
Query: 300 IDATSTLEYL--------YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------E 341
+DA+ L Y Y G + +H DL ++L++ + ++DF +
Sbjct: 112 LDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170
Query: 342 YGM---EGQ---------------VSTRSDIYGYGIVLMETFT 366
Y + GQ S +SD++ +G+VL E FT
Sbjct: 171 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G GSFG V A G +VA+K+ +++ + E + ++ +RHP+++K+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ D +V+EY N L+ D + + + H I+H
Sbjct: 82 VIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 136
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++LLDE + ++DF
Sbjct: 137 RDLKPENLLLDEHLNVKIADF 157
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQ-ECARALKS--FEAQCEVMKSIRHPNLVKVI 258
+IG G+FG V R + +V A+K+ + E + S F + ++M P +V++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ +D + +V+EYMP G L N + + D+ ++ A L L H+ +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLA-LDAIHSMGLI 196
Query: 319 HCDLKPISVLLDEDMVAHLSDF 340
H D+KP ++LLD+ L+DF
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADF 218
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G GSFG V A G +VA+K+ +++ + E + ++ +RHP+++K+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ D +V+EY N L+ D + + + H I+H
Sbjct: 81 VIKSKDEIIMVIEYAG-----NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 135
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++LLDE + ++DF
Sbjct: 136 RDLKPENLLLDEHLNVKIADF 156
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 91/311 (29%)
Query: 200 LSNLIGMGSFGSVYRA-----RLRDG-IEVAVKVFHQECARA-LKSFEAQCEVMKSIRHP 252
L +G G FG V +A + R G VAVK+ + + + L+ ++ V+K + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCM----------------------- 289
+++K+ +CS D L++EY GSL L S +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 290 LDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM----- 344
L + ++ + ++YL ++H DL ++L+ E +SDF
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 345 -------EGQV---------------STRSDIYGYGIVLMETFTRKK------PTDRMFV 376
+G++ +T+SD++ +G++L E T P +R+F
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF- 262
Query: 377 EELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRIN 436
NLL KT E+ + C + L ++C + P+KR
Sbjct: 263 ----------NLL---------KTGHRMER-----PDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 437 AKDIVTRLLKI 447
DI L K+
Sbjct: 299 FADISKDLEKM 309
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQ-ECARALKS--FEAQCEVMKSIRHPNLVKVI 258
+IG G+FG V R + +V A+K+ + E + S F + ++M P +V++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ +D + +V+EYMP G L N + + D+ ++ A L L H+ I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLA-LDAIHSMGFI 190
Query: 319 HCDLKPISVLLDEDMVAHLSDF 340
H D+KP ++LLD+ L+DF
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADF 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 91/311 (29%)
Query: 200 LSNLIGMGSFGSVYRA-----RLRDG-IEVAVKVFHQECARA-LKSFEAQCEVMKSIRHP 252
L +G G FG V +A + R G VAVK+ + + + L+ ++ V+K + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCM----------------------- 289
+++K+ +CS D L++EY GSL L S +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 290 LDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM----- 344
L + ++ + ++YL ++H DL ++L+ E +SDF
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 345 -------EGQV---------------STRSDIYGYGIVLMETFTRKK------PTDRMFV 376
+G++ +T+SD++ +G++L E T P +R+F
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF- 262
Query: 377 EELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRIN 436
NLL KT E+ + C + L ++C + P+KR
Sbjct: 263 ----------NLL---------KTGHRMER-----PDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 437 AKDIVTRLLKI 447
DI L K+
Sbjct: 299 FADISKDLEKM 309
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G GSFG V A G +VA+K+ +++ + E + ++ +RHP+++K+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ D +V+EY N L+ D + + + H I+H
Sbjct: 72 VIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 126
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++LLDE + ++DF
Sbjct: 127 RDLKPENLLLDEHLNVKIADF 147
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G GSFG V A G +VA+K+ +++ + E + ++ +RHP+++K+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ D +V+EY N L+ D + + + H I+H
Sbjct: 76 VIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 130
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++LLDE + ++DF
Sbjct: 131 RDLKPENLLLDEHLNVKIADF 151
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQ-ECARALKS--FEAQCEVMKSIRHPNLVKVI 258
+IG G+FG V R + +V A+K+ + E + S F + ++M P +V++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ +D + +V+EYMP G L N + + D+ ++ A L L H+ I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLA-LDAIHSMGFI 195
Query: 319 HCDLKPISVLLDEDMVAHLSDF 340
H D+KP ++LLD+ L+DF
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADF 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 192 PSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RALKS 238
P+QA LR L ++G G+FG+VY+ + +G I VA+K + + +A K
Sbjct: 14 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 73
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ VM S+ +P++ +++ C + L+ + MP G L + + + LN
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW 132
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGMEGQ 347
+ + YL ++H DL +VL+ ++DF EY EG
Sbjct: 133 CVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 348 ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
+ +SD++ YG+ + E T KP D + E+S
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 191 LPSQAT---LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQ-ECARALKSFEAQCEV 245
+ SQ+T L LS+++G G+ +V+R R + G A+KVF+ R + + EV
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 246 MKSIRHPNLVKV--ISSCSNDDFKALVLEYMPKGSLENCLY--SSTCMLDIFQRLNIMID 301
+K + H N+VK+ I + K L++E+ P GSL L S+ L + L ++ D
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLL----DEDMVAHLSDF 340
+ +L I+H ++KP +++ D V L+DF
Sbjct: 121 VVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQ-ECARALKS--FEAQCEVMKSIRHPNLVKVI 258
+IG G+FG V R + +V A+K+ + E + S F + ++M P +V++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ +D + +V+EYMP G L N + + D+ ++ A L L H+ I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLA-LDAIHSMGFI 195
Query: 319 HCDLKPISVLLDEDMVAHLSDF 340
H D+KP ++LLD+ L+DF
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADF 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 54/206 (26%)
Query: 204 IGMGSFGSVYRARL-----RDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKV- 257
+G G+FGSV R G VAVK + F+ + +++K++ +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 258 -ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL------- 309
+S LV+EY+P G C+ D QR +DA+ L Y
Sbjct: 75 GVSYGPGRPELRLVMEYLPSG----------CLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 310 -YFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM-------------EGQ-------- 347
Y G + +H DL ++L++ + ++DF GQ
Sbjct: 125 EYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 348 -------VSTRSDIYGYGIVLMETFT 366
S +SD++ +G+VL E FT
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Query: 5 FDFSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLDVAS 64
D S N L G + +IG++ + +NL N++S +P +G L L L L+ NKLD
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD--- 693
Query: 65 LEILNLSNNEIYGLIPTXXXXXXXXXXXXXXFNKLEGEILRGGPFVNFTAMSFKGNEPLC 124
G IP N L G I G F F F N LC
Sbjct: 694 ------------GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLC 741
Query: 125 GSPNLQVPPC 134
G P +P C
Sbjct: 742 GYP---LPRC 748
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 10 NSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLD-------- 61
N LEG + ++ +K + + L N+L+ ++P+ + +L +SL+ N+L
Sbjct: 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 62 -VASLEILNLSNNEIYGLIPT 81
+ +L IL LSNN G IP
Sbjct: 512 RLENLAILKLSNNSFSGNIPA 532
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 7 FSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYN 58
S+N L G + IG L+ + + LS N+ S ++PA +G SL L L N
Sbjct: 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 2 ILNFDFSSNSLEGPLSLDIGNL-----KAVVEINLSRNNLSSDMPATIGGLISLKTLSLA 56
+L D SSN+ GP+ + NL + E+ L N + +P T+ L +L L+
Sbjct: 370 LLTLDLSSNNFSGPI---LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 57 YNKLDVASLEILNLSNNEIYGLIPTXXXXXXXXXXXXXXFNKLEGEI 103
+N L G IP+ N LEGEI
Sbjct: 427 FNYLS---------------GTIPSSLGSLSKLRDLKLWLNMLEGEI 458
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 120/311 (38%), Gaps = 91/311 (29%)
Query: 200 LSNLIGMGSFGSVYRA-----RLRDG-IEVAVKVFHQECARA-LKSFEAQCEVMKSIRHP 252
L +G G FG V +A + R G VAVK+ + + + L+ ++ V+K + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCM----------------------- 289
+++K+ +CS D L++EY GSL L S +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 290 LDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM----- 344
L + ++ + ++YL ++H DL ++L+ E +SDF
Sbjct: 147 LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 345 -------EGQV---------------STRSDIYGYGIVLMETFTRKK------PTDRMFV 376
+G++ +T+SD++ +G++L E T P +R+F
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF- 262
Query: 377 EELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRIN 436
NLL KT E+ + C + L ++C + P+KR
Sbjct: 263 ----------NLL---------KTGHRMER-----PDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 437 AKDIVTRLLKI 447
DI L K+
Sbjct: 299 FADISKDLEKM 309
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+++ + E AL + E + E++K +
Sbjct: 153 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKL 211
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 212 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 263
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 264 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 31/160 (19%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ---------ECARALKSFEAQCEVMKSI 249
+S +G G+ G V A R + VA+++ + E AL + E + E++K +
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL-NVETEIEILKKL 197
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSL------ENCLYSSTCMLDIFQRLNIMIDAT 303
HP ++K+ + +D+ +VLE M G L L +TC L +Q L
Sbjct: 198 NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 249
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF 340
++YL H IIH DLKP +VLL +ED + ++DF
Sbjct: 250 LAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA--QCEVMKSIRHPNLVKVISS 260
IG G+FG V++AR R G +VA+K E + A + ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 261 CSND---------------DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
C DF E+ G L N L T L +R+ M+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDF----CEHDLAGLLSNVLVKFT--LSEIKRVMQML----- 134
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L LY+ H I+H D+K +VL+ D V L+DF
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF 169
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA--QCEVMKSIRHPNLVKVISS 260
IG G+FG V++AR R G +VA+K E + A + ++++ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 261 CSND---------------DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
C DF E+ G L N L T L +R+ M+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDF----CEHDLAGLLSNVLVKFT--LSEIKRVMQML----- 134
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L LY+ H I+H D+K +VL+ D V L+DF
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF 169
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 197 LRRLSNLIGMGSFGSVY---RARLRDGIE--VAVKVFHQECARALKS-FEAQCEVMKSIR 250
L+++ +L G G FG V DG VAVK + +S ++ + ++++++
Sbjct: 33 LKKIRDL-GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 251 HPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
H +++K C + +L V+EY+P GSL + L + L +++ A E
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL-----AQLLLFAQQICEG 146
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ + H IH DL +VLLD D + + DF
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDF 178
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSE--------EEATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQV 348
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++ G+FG+VY+ + +G I VA+K + + +A
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+++ MP G L + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 127 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 26/162 (16%)
Query: 183 LDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARLRD-GIEVAVKV-----FHQECARAL 236
LD+++D +L + L +IG G+F V R R+ G + AVK+ F +
Sbjct: 13 LDMADDDVLFED--VYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 237 KSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL 296
+ + + + ++HP++V+++ + S+D +V E+M L C +I +R
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL--C-------FEIVKRA 121
Query: 297 N---IMIDATST------LEYLYFGHTTPIIHCDLKPISVLL 329
+ + +A ++ LE L + H IIH D+KP +VLL
Sbjct: 122 DAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLL 163
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEA--QCEVMKSIRHPNLVKVISS 260
IG G+FG V++AR R G +VA+K E + A + ++++ ++H N+V +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 261 CSND---------------DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
C DF E+ G L N L T L +R+ M+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDF----CEHDLAGLLSNVLVKFT--LSEIKRVMQML----- 133
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L LY+ H I+H D+K +VL+ D V L+DF
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF 168
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 199 RLSNLIGMGSFGSVYR-ARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLV 255
+L IG G+F V R +L G E A K+ + + AR + E + + + ++H N+V
Sbjct: 7 QLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIV 66
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
++ S S + F LV + + G L+ + + + LE + H
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 316 PIIHCDLKPISVLLD---EDMVAHLSDFEYGMEGQ 347
++H DLKP ++LL + L+DF +E Q
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 157
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSI---RHPNLVKVIS 259
IG G FGSV++ R DG A+K + A ++ A EV +H ++V+ S
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 78
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTP 316
+ + DD + EY GSL + + + ++ F+ ++++ L Y+ H+
Sbjct: 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMS 135
Query: 317 IIHCDLKPISVLL 329
++H D+KP ++ +
Sbjct: 136 LVHMDIKPSNIFI 148
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 45/237 (18%)
Query: 185 VSNDGILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDGIEVAVKVFHQE----- 231
++ G P+QA LR L ++G G+FG+VY+ + +G +V + V E
Sbjct: 31 LTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT 90
Query: 232 CARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD 291
+A K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 91 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIG 149
Query: 292 IFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------- 340
LN + + YL ++H DL +VL+ ++DF
Sbjct: 150 SQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 206
Query: 341 EYGMEGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EY EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 193 SQAT---LRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQ-ECARALKSFEAQCEVMK 247
SQ+T L LS+++G G+ +V+R R + G A+KVF+ R + + EV+K
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLK 62
Query: 248 SIRHPNLVKV--ISSCSNDDFKALVLEYMPKGSLENCLY--SSTCMLDIFQRLNIMIDAT 303
+ H N+VK+ I + K L++E+ P GSL L S+ L + L ++ D
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLL----DEDMVAHLSDF 340
+ +L I+H ++KP +++ D V L+DF
Sbjct: 123 GGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSI---RHPNLVKVIS 259
IG G FGSV++ R DG A+K + A ++ A EV +H ++V+ S
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 74
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTP 316
+ + DD + EY GSL + + + ++ F+ ++++ L Y+ H+
Sbjct: 75 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMS 131
Query: 317 IIHCDLKPISVLL 329
++H D+KP ++ +
Sbjct: 132 LVHMDIKPSNIFI 144
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 198 RRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFH---QECARALKSFEAQCEVMKSI 249
+RL L +G G++GSV Y ARLR +VAVK Q A +++ + ++K +
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 84
Query: 250 RHPNLVKVIS----SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+H N++ ++ + S +DF + L G+ N + + D + + ++
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD--EHVQFLV--YQL 140
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
L L + H+ IIH DLKP +V ++ED + DF + M G V+TR
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSI---RHPNLVKVIS 259
IG G FGSV++ R DG A+K + A ++ A EV +H ++V+ S
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTP 316
+ + DD + EY GSL + + + ++ F+ ++++ L Y+ H+
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMS 133
Query: 317 IIHCDLKPISVLL 329
++H D+KP ++ +
Sbjct: 134 LVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSI---RHPNLVKVIS 259
IG G FGSV++ R DG A+K + A ++ A EV +H ++V+ S
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYFGHTTP 316
+ + DD + EY GSL + + + ++ F+ ++++ L Y+ H+
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMS 133
Query: 317 IIHCDLKPISVLL 329
++H D+KP ++ +
Sbjct: 134 LVHMDIKPSNIFI 146
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 117/301 (38%), Gaps = 76/301 (25%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELSLKDWVN 386
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 387 NLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLK 446
K L G + A C + + +C +P +R K +V L +
Sbjct: 270 ------------KLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 447 I 447
I
Sbjct: 316 I 316
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ + H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 117/301 (38%), Gaps = 76/301 (25%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELSLKDWVN 386
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 387 NLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLK 446
K L G + A C + + +C +P +R K +V L +
Sbjct: 270 ------------KLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 447 I 447
I
Sbjct: 316 I 316
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 251 HPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
HPN++++ + + F LV + M KG L + L + + R IM + LE +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIM---RALLEVIC 125
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEY 342
H I+H DLKP ++LLD+DM L+DF +
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 157
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ + H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 25/172 (14%)
Query: 198 RRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFH---QECARALKSFEAQCEVMKSI 249
+RL L +G G++GSV Y ARLR +VAVK Q A +++ + ++K +
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHL 76
Query: 250 RHPNLVKVIS----SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+H N++ ++ + S +DF + L G+ N + + D + + ++
Sbjct: 77 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSD--EHVQFLV--YQL 132
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
L L + H+ IIH DLKP +V ++ED + DF + M G V+TR
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR 184
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 251 HPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
HPN++++ + + F LV + M KG L + L + + R IM + LE +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIM---RALLEVIC 138
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEY 342
H I+H DLKP ++LLD+DM L+DF +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++ G+FG+VY+ + +G I VA+K + + +A
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 126
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 127 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 251 HPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
HPN++++ + + F LV + M KG L + L + + R IM + LE +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIM---RALLEVIC 138
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEY 342
H I+H DLKP ++LLD+DM L+DF +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 53/268 (19%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 132
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 133 DVKPSNILVNSRGEIKLCDF--GVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIW 190
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKKGFVAKEQC 415
G+ L+E + P M + EL D++ N P L V S E + FV K
Sbjct: 191 SMGLSLVEMAVGRYPRPPMAIFELL--DYIVNEPPPKLPSAV----FSLEFQDFVNK--- 241
Query: 416 VLSILGLAMECAMELPEKRINAKDIVTR 443
C ++ P +R + K ++
Sbjct: 242 ----------CLIKNPAERADLKQLMVH 259
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 48/234 (20%)
Query: 182 GLDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEA 241
G+D+ + L Q+ +L + G FG V++A+L + VAVK+F + ++ ++ E
Sbjct: 11 GVDLGTEN-LYFQSMPLQLLEVKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EY 67
Query: 242 QCEVMKSIRHPNLVKVISS----CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN 297
+ + ++H N+++ I + S D L+ + KGSL + L ++ + + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWN--ELCH 125
Query: 298 IMIDATSTLEYLYF-------GHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME----- 345
I L YL+ GH I H D+K +VLL ++ A ++DF ++
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 346 ------GQVSTRS---------------------DIYGYGIVLMETFTRKKPTD 372
GQV TR D+Y G+VL E +R D
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 204 IGMGSFG-SVYRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVISS 260
IG GSFG ++ DG + +K + + + E++ EV + +++HPN+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 261 CSNDDFKALVLEYMPKGSL-------ENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
+ +V++Y G L + L+ +LD F ++ + + H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---------H 142
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF-------------------EYGMEGQV------ 348
I+H D+K ++ L +D L DF Y + ++
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPY 202
Query: 349 STRSDIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVD-KTLLS 403
+ +SDI+ G VL E T K + ++ L LK + P+SL D ++L+S
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 196 TLRRLSNLIGMGSFGSVYR-ARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHP 252
++ +L +G G+F V R ++ G E A K+ + + AR + E + + + ++HP
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 81
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
N+V++ S S + L+ + + G L+ + + + LE +
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 313 HTTPIIHCDLKPISVLLDEDM---VAHLSDFEYGME 345
H ++H DLKP ++LL + L+DF +E
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE 173
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 172 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 162 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 308 YLYFGHTTPIIHCDLKPISVLLD---EDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 182 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 189 GILPSQATLRRLSN-------LIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RA 235
G P+QA LR L ++ G+FG+VY+ + +G I VA+K + + +A
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 236 LKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQR 295
K + VM S+ +P++ +++ C + L+ + MP G L + + +
Sbjct: 61 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL 119
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-----------EYGM 344
LN + + YL ++H DL +VL+ ++DF EY
Sbjct: 120 LNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 345 EGQ----------------VSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
EG + +SD++ YG+ + E T KP D + E+S
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 147 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 173 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECARA-LKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 183 LDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARLRD-GIEVAVKV-----FHQECARAL 236
LD+++D +L + L +IG G F V R R+ G + AVK+ F +
Sbjct: 13 LDMADDDVLFED--VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 237 KSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL 296
+ + + + ++HP++V+++ + S+D +V E+M L +I +R
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRA 121
Query: 297 N---IMIDATST------LEYLYFGHTTPIIHCDLKPISVLL 329
+ + +A ++ LE L + H IIH D+KP VLL
Sbjct: 122 DAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 201 SNLIGMGSFGSVYR-ARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+ ++G G FG V++ G+++A K+ + + + + VM + H NL+++
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ + + LV+EY+ G L + + + L L+ ++ E + H I+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNL---TELDTILFMKQICEGIRHMHQMYILH 210
Query: 320 CDLKPISVL 328
DLKP ++L
Sbjct: 211 LDLKPENIL 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 192 PSQATLRRLSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQECARALKSFEAQCE--V 245
PSQ L ++ +G GSFG V+ + G + A+KV + + + E +
Sbjct: 23 PSQFELLKV---LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 246 MKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+ + HP +VK+ + + L+L+++ G L L S M + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALA 138
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L++L H+ II+ DLKP ++LLDE+ L+DF
Sbjct: 139 LDHL---HSLGIIYRDLKPENILLDEEGHIKLTDF 170
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG V++ R VA+K+ +E ++ + + V+ P + K S
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
D +++EY+ GS + L LD Q I+ + L+YL H+ IH D
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYL---HSEKKIHRD 149
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+K +VLL E L+DF G+ GQ++
Sbjct: 150 IKAANVLLSEHGEVKLADF--GVAGQLT 175
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 192 PSQATLRRLSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQECARALKSFEAQCE--V 245
PSQ L ++ +G GSFG V+ + G + A+KV + + + E +
Sbjct: 24 PSQFELLKV---LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 246 MKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+ + HP +VK+ + + L+L+++ G L L S M + +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALA 139
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L++L H+ II+ DLKP ++LLDE+ L+DF
Sbjct: 140 LDHL---HSLGIIYRDLKPENILLDEEGHIKLTDF 171
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 26/169 (15%)
Query: 203 LIGMGSFGSVYRAR--LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHP-------- 252
++G G+FG V +AR L K+ H E L + ++ ++ S+ H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 253 -----NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATST 305
N VK +++ + +EY +L + ++S D + RL I
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI----- 125
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
LE L + H+ IIH DLKP+++ +DE + DF G+ V DI
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF--GLAKNVHRSLDI 172
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG V++ R VA+K+ +E ++ + + V+ P + K S
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
D +++EY+ GS + L LD Q I+ + L+YL H+ IH D
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYL---HSEKKIHRD 129
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+K +VLL E L+DF G+ GQ++
Sbjct: 130 IKAANVLLSEHGEVKLADF--GVAGQLT 155
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG V++ R VA+K+ +E ++ + + V+ P + K S
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
D +++EY+ GS + L LD Q I+ + L+YL H+ IH D
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYL---HSEKKIHRD 129
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+K +VLL E L+DF G+ GQ++
Sbjct: 130 IKAANVLLSEHGEVKLADF--GVAGQLT 155
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 37/196 (18%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V AR + G +VAVK+ + + + +M+ +H N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTTPIIH 319
+ +++E++ G+L + + RLN AT + L+ L + H +IH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQV--------RLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 320 CDLKPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS------DI 354
D+K S+LL D LSDF Y M +V +RS DI
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 355 YGYGIVLMETFTRKKP 370
+ GI+++E + P
Sbjct: 225 WSLGIMVIEMVDGEPP 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 55/219 (25%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 205 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT 366
E + + +SD++ +G+++ E FT
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 116/301 (38%), Gaps = 76/301 (25%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEELSLKDWVN 386
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 256
Query: 387 NLLPISLMEVVDKTLLSGEKKGFVAKEQCVLSILGLAMECAMELPEKRINAKDIVTRLLK 446
K L G + A C + + +C +P +R K +V L +
Sbjct: 257 ------------KLLKEGHRMDKPA--NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
Query: 447 I 447
I
Sbjct: 303 I 303
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG V++ R VA+K+ +E ++ + + V+ P + K S
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
D +++EY+ GS + L LD Q I+ + L+YL H+ IH D
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYL---HSEKKIHRD 144
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+K +VLL E L+DF G+ GQ++
Sbjct: 145 IKAANVLLSEHGEVKLADF--GVAGQLT 170
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 51/216 (23%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 105
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
+ +H N+V ++ +C++ ++ EY G L N L + +L+ I ST +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 308 YLYFGHTTP----------IIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQ 347
L+F IH D+ +VLL VA + DF Y ++G
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 348 V-----------------STRSDIYGYGIVLMETFT 366
+ +SD++ YGI+L E F+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
++ LV E++ S++ + L I L+ L F H+ ++H
Sbjct: 74 IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 131 DLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + +++E M G L++ L SS MLD+ L++ D +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++EY KG+L L Y + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 192 PSQATLRRLSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQECARALKSFEAQCE--V 245
PSQ L ++ +G GSFG V+ + G + A+KV + + + E +
Sbjct: 23 PSQFELLKV---LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 246 MKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST 305
+ + HP +VK+ + + L+L+++ G L L S M + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALA 138
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L++L H+ II+ DLKP ++LLDE+ L+DF
Sbjct: 139 LDHL---HSLGIIYRDLKPENILLDEEGHIKLTDF 170
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 53/211 (25%)
Query: 200 LSNLIGMGSFGSVYRARL----RDGIEVAVKVFHQECARALKSFEAQCE--VMKSIRHPN 253
L ++G GSFG V+ R G A+KV + + + E ++ + HP
Sbjct: 32 LLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMI-----DATSTLEY 308
+VK+ + + L+L+++ G D+F RL+ + D L
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKEVMFTEEDVKFYLAE 138
Query: 309 LYFG----HTTPIIHCDLKPISVLLDEDMVAHLSDF------------EYGMEGQV---- 348
L G H+ II+ DLKP ++LLDE+ L+DF Y G V
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 349 ---------STRSDIYGYGIVLMETFTRKKP 370
S +D + YG+++ E T P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + C+ + F + ++ H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + +++E M G L++ L SS MLD+ L++ D +
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
++ LV E++ S++ + L I L+ L F H+ ++H
Sbjct: 72 IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 168
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 38/177 (21%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST--------------- 305
++ LV E++ Q L +DA++
Sbjct: 74 IHTENKLYLVFEFL------------------HQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
L+ L F H+ ++H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGS------------LENCLYSSTCMLDIFQRLN 297
+H N++ ++ +C+ D +++EY KG+ LE C S + +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 298 IMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------------- 340
++ A + + + IH DL +VL+ ED V ++DF
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 341 ----------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 50/230 (21%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGS------------LENCLYSSTCMLDIFQRLN 297
+H N++ ++ +C+ D +++EY KG+ LE C S + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 298 IMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------------- 340
++ A + + + IH DL +VL+ ED V ++DF
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 341 ----------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKV 257
L +IG G+ V A E VA+K + ++C ++ + + M HPN+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 73
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYS-------STCMLDIFQRLNIMIDATSTLEYLY 310
+S D LV++ + GS+ + + + +LD I+ + LEYL
Sbjct: 74 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL- 132
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
H IH D+K ++LL ED ++DF G+ ++T DI
Sbjct: 133 --HKNGQIHRDVKAGNILLGEDGSVQIADF--GVSAFLATGGDI 172
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKV 257
L +IG G+ V A E VA+K + ++C ++ + + M HPN+V
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYS-------STCMLDIFQRLNIMIDATSTLEYLY 310
+S D LV++ + GS+ + + + +LD I+ + LEYL
Sbjct: 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL- 137
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
H IH D+K ++LL ED ++DF G+ ++T DI
Sbjct: 138 --HKNGQIHRDVKAGNILLGEDGSVQIADF--GVSAFLATGGDI 177
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
++ LV E++ S++ + L I L+ L F H+ ++H
Sbjct: 74 IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
++ LV E++ S++ + L I L+ L F H+ ++H
Sbjct: 73 IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 169
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 174
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L++ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 167
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 167
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 38/177 (21%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATST--------------- 305
++ LV E+ + Q L +DA++
Sbjct: 70 IHTENKLYLVFEH------------------VHQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
L+ L F H+ ++H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 166
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 51/216 (23%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 105
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
+ +H N+V ++ +C++ ++ EY G L N L + +L+ I ST +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 308 YLYFGHTTP----------IIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQ 347
L+F IH D+ +VLL VA + DF Y ++G
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 348 V-----------------STRSDIYGYGIVLMETFT 366
+ +SD++ YGI+L E F+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL---- 296
+H N++ ++ +C+ D +++EY KG+L L YS + ++L
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 297 --NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
+ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 204 IGMGSFGSVYR-ARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R + E A K+ + + AR + E + + + ++HPN+V++ S
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
S + F LV + + G L+ + + + LE + H I+H
Sbjct: 99 ISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHR 154
Query: 321 DLKPISVLLD---EDMVAHLSDFEYGMEGQ 347
DLKP ++LL + L+DF +E Q
Sbjct: 155 DLKPENLLLASKCKGAAVKLADFGLAIEVQ 184
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEG 155
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRARL----RDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A +D +VAVK+ + + L ++ E+MK I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------------YSSTCMLDIFQ 294
+H N++ ++ +C+ D +++EY KG+L L ++ L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 295 RLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ +EYL + IH DL +VL+ ED V ++DF
Sbjct: 152 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G++L E FT P + VEEL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 78 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 174
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 128
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 171
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 167
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 127
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 123
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 166
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 74 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 127
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 169
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 167
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 168
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 169
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 167
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 75 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 128
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 171
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 202 NLIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLV 255
++G G+FG+VY+ + +G I VA+K + + +A K + VM S+ +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
+++ C + L+ + MP G L + + + LN + + YL
Sbjct: 78 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL---EDR 133
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF-----------EYGMEGQ----------------V 348
++H DL +VL+ ++DF EY EG
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 349 STRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
+ +SD++ YG+ + E T KP D + E+S
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 123
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 166
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 123
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 166
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 168
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLSFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 167
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 129
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEG 158
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEG 155
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 167
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 191 LPSQATLRRLSNLIGMGSFGSVYRARLR-DG-IEVAVKVFHQECARALKS-FEAQCEVMK 247
+PS+A + IG GS+G + R + DG I V ++ + A K ++ +++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 248 SIRHPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSST---CMLDIFQRLNIMIDA 302
++HPN+V+ + L V+EY G L + + T LD L +M
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 303 TSTLEYLYF----GHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
T L+ + GHT ++H DLKP +V LD L DF
Sbjct: 121 TLALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDF 160
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 191 LPSQATLRRLSNLIGMGSFGSVYRARLR-DG-IEVAVKVFHQECARALKS-FEAQCEVMK 247
+PS+A + IG GS+G + R + DG I V ++ + A K ++ +++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 248 SIRHPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSST---CMLDIFQRLNIMIDA 302
++HPN+V+ + L V+EY G L + + T LD L +M
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 303 TSTLEYLYF----GHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
T L+ + GHT ++H DLKP +V LD L DF
Sbjct: 121 TLALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDF 160
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEG 155
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEG 155
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 167
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 202 NLIGMGSFGSVYRA-RLRDG----IEVAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLV 255
++G G+FG+VY+ + +G I VA+K + + +A K + VM S+ +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
+++ C + L+ + MP G L + + + LN + + YL
Sbjct: 75 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDR 130
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF-----------EYGMEGQ----------------V 348
++H DL +VL+ ++DF EY EG
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 349 STRSDIYGYGIVLMETFT-RKKPTDRMFVEELS 380
+ +SD++ YG+ + E T KP D + E+S
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEG 160
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 123
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 166
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 73 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 191 LPSQATLRRLSNLIGMGSFGSVYRARLR-DG-IEVAVKVFHQECARALKS-FEAQCEVMK 247
+PS+A + IG GS+G + R + DG I V ++ + A K ++ +++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 248 SIRHPNLVKVISSCSNDDFKAL--VLEYMPKGSLENCLYSST---CMLDIFQRLNIMIDA 302
++HPN+V+ + L V+EY G L + + T LD L +M
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 303 TSTLEYLYF----GHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
T L+ + GHT ++H DLKP +V LD L DF
Sbjct: 121 TLALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDF 160
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 140 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 167
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 168
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 200 LSNLIGMGSFGSVYRA-RLRDGIEVAVKVFHQEC-ARALKSFEAQCEVMKSIRHPNLVKV 257
L IG G F V A + G VA+K+ + L + + E +K++RH ++ ++
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ +VLEY P G L + + S + + R+ + S + Y+ H+
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYV---HSQGY 129
Query: 318 IHCDLKPISVLLDEDMVAHLSDF 340
H DLKP ++L DE L DF
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDF 152
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 191
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 192 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 250 SMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V R + G A+K+ +E A + V+++ RHP L +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+ D V+EY G L L + R + S LEYL H+ +
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYL---HSRDV 126
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ D+K +++LD+D ++DF EG
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEG 155
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 167
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 72 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 125
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 168
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GSFG V+R + + G + AVK E R + C + S P +V + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSS---PRIVPLYGAVR 120
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +E + GSL + C+ + + L + A LEYL HT I+H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYL---HTRRILHGDV 176
Query: 323 KPISVLLDEDMV-AHLSDFEYGM 344
K +VLL D A L DF + +
Sbjct: 177 KADNVLLSSDGSRAALCDFGHAL 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVI 258
++G GSFG V + + G E AVKV + + E+ + +++K + HPN++K+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ + LV E G L + + S ++ I+ S + Y+ H I+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM---HKNKIV 172
Query: 319 HCDLKPISVLLD 330
H DLKP ++LL+
Sbjct: 173 HRDLKPENLLLE 184
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++ Y KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVI 258
++G GSFG V + + G E AVKV + + E+ + +++K + HPN++K+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ + LV E G L + + S ++ I+ S + Y+ H I+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM---HKNKIV 171
Query: 319 HCDLKPISVLLD 330
H DLKP ++LL+
Sbjct: 172 HRDLKPENLLLE 183
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A + G +VAVK + + + +M+ H N+V + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT---STLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N AT S L L + H +IH
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 165 RDIKSDSILLTSDGRIKLSDF--GFCAQVS 192
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GSFG V+R + + G + AVK E R + C + S P +V + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSS---PRIVPLYGAVR 136
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +E + GSL + C+ + + L + A LEYL HT I+H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYL---HTRRILHGDV 192
Query: 323 KPISVLLDED-MVAHLSDFEYGM 344
K +VLL D A L DF + +
Sbjct: 193 KADNVLLSSDGSRAALCDFGHAL 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 144 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 171
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 201 SNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVK 256
++G GSFG V + + G E AVKV + + E+ + +++K + HPN++K
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ + + LV E G L + + S ++ I+ S + Y+ H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM---HKNK 152
Query: 317 IIHCDLKPISVLLD 330
I+H DLKP ++LL+
Sbjct: 153 IVHRDLKPENLLLE 166
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFH--QECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + G VA+K E + + ++K + HPN+VK++
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 74 IHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 127
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTL 170
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 151 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 178
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVI 258
++G GSFG V + + G E AVKV + + E+ + +++K + HPN++K+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ + LV E G L + + S ++ I+ S + Y+ H I+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM---HKNKIV 148
Query: 319 HCDLKPISVLLD 330
H DLKP ++LL+
Sbjct: 149 HRDLKPENLLLE 160
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 149 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 176
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GSFG V+R + + G + AVK E R + C + S P +V + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSS---PRIVPLYGAVR 134
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +E + GSL + C+ + + L + A LEYL HT I+H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYL---HTRRILHGDV 190
Query: 323 KPISVLLDEDMV-AHLSDFEYGM 344
K +VLL D A L DF + +
Sbjct: 191 KADNVLLSSDGSRAALCDFGHAL 213
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG V+R R G A K ++ + + M +RHP LV + +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+D+ ++ E+M G L + + + + M L ++ H +H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDL 281
Query: 323 KPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
KP +++ L ++G+ + + +
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 203 LIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMK------SIRHPNLV 255
++G GSFG V AR+++ G AVKV ++ L+ + +C + + + HP L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLT 87
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
++ D V+E++ G L + S F A + L F H
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK 143
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
II+ DLK +VLLD + L+DF EG
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 56/233 (24%)
Query: 200 LSNLIGMGSFGSVYRA--------RLRDGIEVAVKVFHQECA-RALKSFEAQCEVMKSI- 249
L +G G+FG V A + ++ + VAVK+ + + L ++ E+MK I
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-----------YSSTCMLDIFQRLNI 298
+H N++ ++ +C+ D +++ Y KG+L L Y + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 299 MIDATSTL----EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------- 340
++ T L EYL + IH DL +VL+ E+ V ++DF
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 341 -------------EYGMEGQVSTRSDIYGYGIVLMETFT-RKKPTDRMFVEEL 379
E + + +SD++ +G+++ E FT P + VEEL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALK---SFEAQCEVMKSIRHPNLVKVIS 259
+G GSFG V A + +VA+K ++ + E + +K +RHP+++K+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-----IFQRLNIMIDATSTLEYLYFGHT 314
+ +V+EY G L + + M + FQ++ I+ + H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE---------YCHR 126
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
I+H DLKP ++LLD+++ ++DF
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADF 152
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+FG V+R R G A K ++ + + M +RHP LV + +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+D+ ++ E+M G L + + + + M L ++ H +H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDL 175
Query: 323 KPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
KP +++ L ++G+ + + +
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 156
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 157 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 215 SMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--------EATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQVS 349
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 204 IGMGSFGSVYR--ARLRDGIEV--AVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G++ +VY+ ++L D + +++ H+E A E ++K ++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS--LLKDLKHANIVTLHD 67
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ LV EY+ K + Y C +I N+ + L L + H ++H
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQ---YLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRS 352
DLKP ++L++E L+DF + T++
Sbjct: 124 RDLKPQNLLINERGELKLADFGLARAKSIPTKT 156
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--------EATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQVS 349
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 194 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 35/202 (17%)
Query: 197 LRRLSNLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNL 254
R+S L G G+ G V + + R G+ +A K+ H E A+++ + +V+ P +
Sbjct: 18 FERISEL-GAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGH 313
V + +D ++ +E+M GSL+ L + + + I +++I + L YL H
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAYLREKH 134
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQV------------------------- 348
I+H D+KP ++L++ L DF G+ GQ+
Sbjct: 135 Q--IMHRDVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMAPERLQGTHY 190
Query: 349 STRSDIYGYGIVLMETFTRKKP 370
S +SDI+ G+ L+E + P
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYP 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + S D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--------EATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQVS 349
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 130 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--------EATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQVS 349
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G+E A K + +RA + E + +++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG---- 312
+ N L+LE + G L + L + + +ATS ++ + G
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--------EATSFIKQILDGVNYL 131
Query: 313 HTTPIIHCDLKPISV-LLDEDM-VAHLSDFEYGMEGQVS 349
HT I H DLKP ++ LLD+++ + H+ ++G+ ++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVI 258
+L LIG G +G+VY+ L D VAVKVF + + E + + H N+ + I
Sbjct: 16 KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFI 73
Query: 259 SSCSNDDFKA-------LVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
++ A LV+EY P GSL L T D + T L YL+
Sbjct: 74 --VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHT 129
Query: 312 -----GHTTPII-HCDLKPISVLLDEDMVAHLSDFEYGM 344
H P I H DL +VL+ D +SDF M
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 130 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 129
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 130 HSLQIAHFDLKPENIML 146
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 129
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 130 HSLQIAHFDLKPENIML 146
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 130 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 130 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 356 GYGIVLMETFTRKKPTDRMFVEELSL 381
G+ L+E + P +EL L
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GSFG V+R + G + AVK E RA + C + S P +V + +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM--ACAGLTS---PRIVPLYGAVR 155
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +E + GSL + C+ + + L + A LEYL H+ I+H D+
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYL---HSRRILHGDV 211
Query: 323 KPISVLLDEDMV-AHLSDFEYGM 344
K +VLL D A L DF + +
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAV 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G GSFG V+R + G + AVK E RA + C + S P +V + +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM--ACAGLTS---PRIVPLYGAVR 136
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +E + GSL + C+ + + L + A LEYL H+ I+H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYL---HSRRILHGDV 192
Query: 323 KPISVLLDEDMV-AHLSDFEYGM 344
K +VLL D A L DF + +
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAV 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 48/224 (21%)
Query: 189 GILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-RALK 237
G +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 1 GSVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 238 SFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-----I 292
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 293 FQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM------- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDIYET 178
Query: 345 ----------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKV-----FHQECARALKSFEAQCEVMKSIRHPN 253
L +IG G F V R R+ G + AVK+ F + + + + + ++HP+
Sbjct: 30 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATST----- 305
+V+++ + S+D +V E+M L +I +R + + +A ++
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 306 -LEYLYFGHTTPIIHCDLKPISVLL 329
LE L + H IIH D+KP VLL
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLRDGIEVAV--KV-FHQECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + EV K+ E + + ++K + HPN+VK++
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 71 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 124
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 167
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 204 IGMGSFGSVYRARLRDGIEVAV--KV-FHQECARALKSFEAQCEVMKSIRHPNLVKVISS 260
IG G++G VY+AR + EV K+ E + + ++K + HPN+VK++
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCM---LDIFQRLNIMIDATSTLEYLYFGHTTPI 317
++ LV E++ + L+ + +S L + + + L+ L F H+ +
Sbjct: 70 IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL-----LQGLAFCHSHRV 123
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIYGYGIVLM 362
+H DLKP ++L++ + L+DF V R+ Y + +V +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTL 166
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVI 258
++G GSFG V + + G E AVKV + + E+ + +++K + HPN+ K+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPII 318
+ + LV E G L + + S F ++ L + + H I+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 319 HCDLKPISVLLD 330
H DLKP ++LL+
Sbjct: 149 HRDLKPENLLLE 160
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG GS G V A +R G VAVK + + + +M+ +H N+V++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN---IMIDATSTLEYLYFGHTTPIIH 319
D +V+E++ G+L + + + R+N I + L+ L H +IH
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHT--------RMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 320 CDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
D+K S+LL D LSDF G QVS
Sbjct: 271 RDIKSDSILLTHDGRVKLSDF--GFCAQVS 298
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 179
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 200 LSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNL 254
L+ ++G G FG VY + I VAVK ++C K F ++ +MK++ HP++
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+I + +++E P G L + L + L + + + + YL +
Sbjct: 88 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ES 143
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
+H D+ ++L+ L DF
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDF 169
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 204 IGMGSFGSVYRARLRDG-IEVAVKVF---------HQECARALKSFEAQC----EVMKSI 249
+G G++G V + ++G E A+KV + + + ++ F + ++KS+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
HPN++K+ + + LV E+ G L + + D NIM S + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL 162
Query: 310 YFGHTTPIIHCDLKPISVLLD 330
H I+H D+KP ++LL+
Sbjct: 163 ---HKHNIVHRDIKPENILLE 180
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 182
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 40/207 (19%)
Query: 200 LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-RALKSFEAQCEVMKSIRHP 252
+S +G GSFG VY + ++D E VA+K ++ + R F + VMK
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-----IFQRLNIMID-ATSTL 306
++V+++ S +++E M +G L++ L S ++ L+ MI A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 307 EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------------------------- 340
+ + + + +H DL + ++ ED + DF
Sbjct: 134 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 341 -EYGMEGQVSTRSDIYGYGIVLMETFT 366
E +G +T SD++ +G+VL E T
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 200 LSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNL 254
L+ ++G G FG VY + I VAVK ++C K F ++ +MK++ HP++
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+I + +++E P G L + L + L + + + + YL +
Sbjct: 76 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ES 131
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
+H D+ ++L+ L DF
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDF 157
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 145 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+LE + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE--------EEATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 129
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 130 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 356 GYGIVLMETFTRKKP 370
G+ L+E + P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 142 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 200 LSNLIGMGSFGSVYRARLR----DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNL 254
L+ ++G G FG VY + I VAVK ++C K F ++ +MK++ HP++
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
VK+I + +++E P G L + L + L + + + + YL +
Sbjct: 72 VKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ES 127
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
+H D+ ++L+ L DF
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDF 153
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 145 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 188
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 181
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQE---CAR---ALKSFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G E A K + +R + + E + +++ IRHPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCML--DIFQRLNIMIDATSTLEYLYFGHT 314
+ N L+LE + G L + L + + Q L ++D +++ H+
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG------VHYLHS 126
Query: 315 TPIIHCDLKPISVLL 329
I H DLKP +++L
Sbjct: 127 KRIAHFDLKPENIML 141
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 191 LPSQATLRRLSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFE-AQCEVMKS 248
+ S + ++L L G G++ +VY+ + G+ VA+K + S + +MK
Sbjct: 1 MSSSSQFKQLEKL-GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 249 IRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC----------MLDIFQRLNI 298
++H N+V++ ++ LV E+M L+ + S T ++ FQ
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQ---- 114
Query: 299 MIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+ L F H I+H DLKP ++L+++ L DF
Sbjct: 115 ----WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDF 152
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 144 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE---CAR---ALKSFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G E A K + +R + + E + +++ IRHPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCML--DIFQRLNIMIDATSTLEYLYFGHT 314
+ N L+LE + G L + L + + Q L ++D +++ H+
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG------VHYLHS 147
Query: 315 TPIIHCDLKPISVLL 329
I H DLKP +++L
Sbjct: 148 KRIAHFDLKPENIML 162
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 182
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQE---CAR---ALKSFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G E A K + +R + + E + +++ IRHPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCML--DIFQRLNIMIDATSTLEYLYFGHT 314
+ N L+LE + G L + L + + Q L ++D +++ H+
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG------VHYLHS 133
Query: 315 TPIIHCDLKPISVLL 329
I H DLKP +++L
Sbjct: 134 KRIAHFDLKPENIML 148
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 181
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 19/137 (13%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECAR--ALKSFEAQCEVMKSIRHPNLVKVIS 259
++G GSFG V + + R E AVKV ++ A+ + + E++K + HPN++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIM-IDATSTLEYLYFG----H 313
+LE + LY+ + D I +R DA ++ ++ G H
Sbjct: 89 ----------ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 314 TTPIIHCDLKPISVLLD 330
I+H DLKP ++LL+
Sbjct: 139 KHNIVHRDLKPENILLE 155
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL IG G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 141
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 48/227 (21%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 92
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--- 291
F + VMK ++V+++ S +++E M +G L++ L S ++
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 292 --IFQRLNIMID-ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---- 344
L+ MI A + + + + +H DL + ++ ED + DF GM
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF--GMTRDI 210
Query: 345 -------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 186
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKS-FEAQCEVMKSIRHPNLVKVISSC 261
+G G+ G V++ + G+ +A K+ H E A+++ + +V+ P +V +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLD-IFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+D ++ +E+M GSL+ L + + + I +++I + L YL H I+H
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREKHK--IMHR 148
Query: 321 DLKPISVLLDEDMVAHLSDFEYGMEGQV-------------------------STRSDIY 355
D+KP ++L++ L DF G+ GQ+ S +SDI+
Sbjct: 149 DVKPSNILVNSRGEIKLCDF--GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 356 GYGIVLMETFTRKKP 370
G+ L+E + P
Sbjct: 207 SMGLSLVEMAVGRYP 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 145 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H DL + ++ D + DF
Sbjct: 145 YLNAKKF------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVISSC 261
+G G+FG V+R + V V F L + + E+ M + HP L+ + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
+ L+LE++ G L + + + + + +N M A L+++ H I+H D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLD 174
Query: 322 LKPISVLLDEDMVAHLSDFEYGM 344
+KP +++ + + + ++G+
Sbjct: 175 IKPENIMCETKKASSVKIIDFGL 197
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 26/169 (15%)
Query: 203 LIGMGSFGSVYRAR--LRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHP-------- 252
++G G+FG V +AR L K+ H E L + ++ ++ S+ H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 253 -----NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC--MLDIFQRLNIMIDATST 305
N VK ++ + EY +L + ++S D + RL I
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI----- 125
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDI 354
LE L + H+ IIH +LKP ++ +DE + DF G+ V DI
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDF--GLAKNVHRSLDI 172
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCML---- 290
F + VMK ++V+++ S +++E M +G L++ L S +
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 291 -----DIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM- 344
+ + + + + + YL + +H DL + ++ ED + DF GM
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDF--GMT 175
Query: 345 ----------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 176 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 92
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 147
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 186 SNDGILPSQATLRR----LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-R 234
+ D +P + + R +S +G GSFG VY + ++D E VA+K ++ + R
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 235 ALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCML---- 290
F + VMK ++V+++ S +++E M +G L++ L S +
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 291 -----DIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM- 344
+ + + + + + YL + +H DL + ++ ED + DF GM
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDF--GMT 185
Query: 345 ----------------------------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQEC----ARALKSFEAQCEVMKSIRH 251
L ++G G +G V++ R G A+KV + A+ +A+ +++ ++H
Sbjct: 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH 80
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V +I + L+LEY+ G L L ++ + + + L +L
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHL-- 137
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H II+ DLKP +++L+ L+DF
Sbjct: 138 -HQKGIIYRDLKPENIMLNHQGHVKLTDF 165
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQEC----ARALKSFEAQCEVMKSIRH 251
L ++G G +G V++ R G A+KV + A+ +A+ +++ ++H
Sbjct: 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH 80
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V +I + L+LEY+ G L L ++ + + + L +L
Sbjct: 81 PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHL-- 137
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H II+ DLKP +++L+ L+DF
Sbjct: 138 -HQKGIIYRDLKPENIMLNHQGHVKLTDF 165
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 141
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 52/209 (24%)
Query: 204 IGMGSFGSVYRARLR------DGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
+G G+FG VY ++ ++VAVK + + + F + ++ H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLY---------SSTCMLDIFQRLNIMIDATSTLE 307
I + ++LE M G L++ L SS MLD+ L++ D +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 308 YLYFGHTTPIIHCDLKPISVLL---DEDMVAHLSDF------------------------ 340
YL H IH D+ + LL VA + DF
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLMETFT 366
E MEG ++++D + +G++L E F+
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRARLRDGIEVA----VKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
IG G++G+V++A+ R+ E+ V++ + + C ++K ++H N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+D LV E+ + + Y +C D+ + + L+ L F H+ ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKK---YFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLH 124
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++L++ + L+DF
Sbjct: 125 RDLKPQNLLINRNGELKLADF 145
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG V++ R VA+K+ +E ++ + + V+ + K S
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
+++EY+ GS + L + D FQ ++ + L+YL H+ IH D
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYL---HSEKKIHRD 145
Query: 322 LKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+K +VLL E L+DF G+ GQ++
Sbjct: 146 IKAANVLLSEQGDVKLADF--GVAGQLT 171
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 194 QATLRRLSNLI---GMGSFGSVYRARLR-DGIEVAVKVFHQECAR--ALKSFEAQCEVMK 247
Q T N++ G GSFG V + + R E AVKV ++ A+ + + E++K
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM-IDATSTL 306
+ HPN++K+ + +V E G L + +I +R DA +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD---------EIIKRKRFSEHDAARII 127
Query: 307 EYLYFG----HTTPIIHCDLKPISVLLD 330
+ ++ G H I+H DLKP ++LL+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLE 155
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 194 QATLRRLSNLI---GMGSFGSVYRARLR-DGIEVAVKVFHQECAR--ALKSFEAQCEVMK 247
Q T N++ G GSFG V + + R E AVKV ++ A+ + + E++K
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIM-IDATSTL 306
+ HPN++K+ + +V E G L + +I +R DA +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD---------EIIKRKRFSEHDAARII 127
Query: 307 EYLYFG----HTTPIIHCDLKPISVLLD 330
+ ++ G H I+H DLKP ++LL+
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLE 155
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 138
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 156
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLT 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 100
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 155
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLT 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 142
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 148
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 78
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 133
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLT 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 79
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 134
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 194
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLT 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 104
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 159
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTR 351
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR 209
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 104
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 159
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 219
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLT 241
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 143
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 92
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 147
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLT 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 143
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 138
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 78
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 133
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLT 215
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 143
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 148
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 88
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 143
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 203
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 93
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 148
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 138
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 83
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 138
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 25/156 (16%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
LIG G FG V++A+ R DG +K +A E + + + + H N+V
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCW 73
Query: 262 SNDDFKA----------------LVLEYMPKGSLENCLYSSTC-MLDIFQRLNIMIDATS 304
D+ + +E+ KG+LE + LD L + T
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
++Y+ H+ +I+ DLKP ++ L + + DF
Sbjct: 134 GVDYI---HSKKLINRDLKPSNIFLVDTKQVKIGDF 166
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 200 LSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKV 257
+++G G+F V A R VA+K +E + S E + V+ I+HPN+V +
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 258 ISSCSNDDFKALVLEYMPKGSL-----ENCLYSS-TCMLDIFQRLNIMIDATSTLEYLYF 311
+ L+++ + G L E Y+ IFQ L+ ++YL
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYL-- 132
Query: 312 GHTTPIIHCDLKPISVL---LDEDMVAHLSDF 340
H I+H DLKP ++L LDED +SDF
Sbjct: 133 -HDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 142
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 141
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 80
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 135
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 195
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLT 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 86
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 141
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 204 IGMGSFGSVYR-ARLRDGIEVAVKVFHQE--CARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G+F V R ++ G E A + + + AR + E + + + ++HPN+V++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
S + L+ + + G L+ + + + LE + H ++H
Sbjct: 79 ISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 321 DLKPISVLLDEDM---VAHLSDFEYGME 345
+LKP ++LL + L+DF +E
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIE 162
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 44/209 (21%)
Query: 200 LSNLIGMGSFGSVY----RARLRDGIE--VAVKVFHQECA-RALKSFEAQCEVMKSIRHP 252
+S +G GSFG VY + ++D E VA+K ++ + R F + VMK
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD-----IFQRLNIMID-ATSTL 306
++V+++ S +++E M +G L++ L S ++ L+ MI A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 307 EYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGM---------------------- 344
+ + + + +H DL + + ED + DF GM
Sbjct: 136 DGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDF--GMTRDIYETDYYRKGGKGLLPVRW 193
Query: 345 -------EGQVSTRSDIYGYGIVLMETFT 366
+G +T SD++ +G+VL E T
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 200 LSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKV 257
+++G G+F V A R VA+K +E + S E + V+ I+HPN+V +
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 258 ISSCSNDDFKALVLEYMPKGSL-----ENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
+ L+++ + G L E Y+ D + + ++DA L
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER---DASRLIFQVLDAVKYL------ 132
Query: 313 HTTPIIHCDLKPISVL---LDEDMVAHLSDF 340
H I+H DLKP ++L LDED +SDF
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 200 LSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKV 257
+++G G+F V A R VA+K +E + S E + V+ I+HPN+V +
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 258 ISSCSNDDFKALVLEYMPKGSL-----ENCLYSS-TCMLDIFQRLNIMIDATSTLEYLYF 311
+ L+++ + G L E Y+ IFQ L+ ++YL
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYL-- 132
Query: 312 GHTTPIIHCDLKPISVL---LDEDMVAHLSDF 340
H I+H DLKP ++L LDED +SDF
Sbjct: 133 -HDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALK------SFEAQCEVMKSIRHPNLVK 256
+G G F V + R + G++ A K + ++ + E + ++K I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL----YFG 312
+ N L+ E + G L + L + + +AT L+ + Y+
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE--------EATEFLKQILNGVYYL 130
Query: 313 HTTPIIHCDLKPISVLL 329
H+ I H DLKP +++L
Sbjct: 131 HSLQIAHFDLKPENIML 147
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVA---VKVFHQECARALKSFE--AQCEVMKSIRHPNLVKV 257
IG+G++G+VY+AR G VA V+V + E + + A +++ HPN+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 258 ISSCS----NDDFK-ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
+ C+ + + K LV E++ + + L ++M L++L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL--- 128
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGMEGQV 348
H I+H DLKP ++L+ L+DF E ++
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTY 188
Query: 349 STRSDIYGYGIVLMETFTRK 368
+T D++ G + E F RK
Sbjct: 189 ATPVDMWSVGCIFAEMFRRK 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVA---VKVFHQECARALKSFE--AQCEVMKSIRHPNLVKV 257
IG+G++G+VY+AR G VA V+V + E + + A +++ HPN+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 258 ISSCS----NDDFK-ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
+ C+ + + K LV E++ + + L ++M L++L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL--- 128
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGMEGQV 348
H I+H DLKP ++L+ L+DF E ++
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTY 188
Query: 349 STRSDIYGYGIVLMETFTRK 368
+T D++ G + E F RK
Sbjct: 189 ATPVDMWSVGCIFAEMFRRK 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 142
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H +L + ++ D + DF
Sbjct: 145 YLNAKKF------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVA---VKVFHQECARALKSFE--AQCEVMKSIRHPNLVKV 257
IG+G++G+VY+AR G VA V+V + E + + A +++ HPN+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 258 ISSCS----NDDFK-ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
+ C+ + + K LV E++ + + L ++M L++L
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL--- 128
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGMEGQV 348
H I+H DLKP ++L+ L+DF E ++
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTY 188
Query: 349 STRSDIYGYGIVLMETFTRK 368
+T D++ G + E F RK
Sbjct: 189 ATPVDMWSVGCIFAEMFRRK 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMK------SIRHP 252
L ++G GSFG V+ A + + A+K ++ L + +C +++ + HP
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHP 78
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
L + + + V+EY+ G L + +C R A + L F
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFY--AAEIILGLQFL 134
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H+ I++ DLK ++LLD+D ++DF
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADF 162
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 204 IGMGSFGSVYRARLRDGIE------VAVKVFHQECA-RALKSFEAQCEVMKSIRHPNLVK 256
+G GSFG VY RD I+ VAVK ++ + R F + VMK ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYS------------STCMLDIFQRLNIMIDATS 304
++ S +V+E M G L++ L S + ++ Q + D +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------ 340
L F +H +L + ++ D + DF
Sbjct: 146 YLNAKKF------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 341 ---EYGMEGQVSTRSDIYGYGIVLME 363
E +G +T SD++ +G+VL E
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 44/204 (21%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG--------MEGQVSTRS------- 352
L + H+ IIH DLKP ++ ++ED L +YG M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNED--CELKILDYGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 353 ----------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 99/254 (38%), Gaps = 41/254 (16%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMK------SIRHP 252
L ++G GSFG V+ A + + A+K ++ L + +C +++ + HP
Sbjct: 22 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHP 79
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
L + + + V+EY+ G L + +C R A + L F
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFY--AAEIILGLQFL 135
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF---EYGMEGQVSTRS----------------- 352
H+ I++ DLK ++LLD+D ++DF + M G T
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 353 -----DIYGYGIVLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTLLSGEKK 407
D + +G++L E + P EEL ++N +E K LL K
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLV---K 252
Query: 408 GFVAKEQCVLSILG 421
FV + + L + G
Sbjct: 253 LFVREPEKRLGVRG 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 42/204 (20%)
Query: 203 LIGMGSFGSVYRARLRDGIE--VAVKVFHQECARALKSFEAQC-----EVMKSIRHPNLV 255
++G GSFG V A R G E A+K+ ++ ++ + +C V+ + P +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVV--IQDDDVECTMVEKRVLALLDKPPFL 82
Query: 256 KVISSCSND-DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ SC D V+EY+ G L +Y + F+ + A L+F H
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQ-QVGKFKEPQAVFYAAEISIGLFFLHK 138
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF----EYGMEGQVSTRS------------------ 352
II+ DLK +V+LD + ++DF E+ M+G V+TR
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG-VTTREFCGTPDYIAPEIIAYQPY 197
Query: 353 ----DIYGYGIVLMETFTRKKPTD 372
D + YG++L E + P D
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKV--FHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG G++G VY+A+ G A+K +E + + ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 262 SNDDFKALVLEYMP---KGSLENC---LYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
LV E++ K L+ C L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP ++L++ + ++DF
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADF 144
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKV--FHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG G++G VY+A+ G A+K +E + + ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 262 SNDDFKALVLEYMP---KGSLENC---LYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
LV E++ K L+ C L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP ++L++ + ++DF
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADF 144
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKV--FHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG G++G VY+A+ G A+K +E + + ++K ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 262 SNDDFKALVLEYMP---KGSLENC---LYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
LV E++ K L+ C L S T + Q LN + + H
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----------YCHDR 119
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP ++L++ + ++DF
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADF 144
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 156
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLN 216
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLT 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 204 IGMGSFGSVYRARLRDGIEVA----VKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
IG G++G+V++A+ R+ E+ V++ + + C ++K ++H N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKHKNIVRLHD 68
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+D LV E+ + + Y +C D+ + + L+ L F H+ ++H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKK---YFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLH 124
Query: 320 CDLKPISVLLDEDMVAHLSDF 340
DLKP ++L++ + L++F
Sbjct: 125 RDLKPQNLLINRNGELKLANF 145
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + + D Q L I L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI-----LR 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVIS 259
+G G++G V + + G E A+K+ + + A + V+K + HPN++K+
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ LV+E G L + + F ++ + L + H I+H
Sbjct: 89 FFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVH 144
Query: 320 CDLKPISVLLD---EDMVAHLSDF 340
DLKP ++LL+ D + + DF
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDF 168
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVKVFH---QECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G++GSV + ++ G+++AVK Q A +++ + ++K ++H N++ ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 260 ----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ S ++F + L ++ L N + D Q L I L L + H+
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LRGLKYIHS 172
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTR 351
IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 45/204 (22%)
Query: 204 IGMGSFGSVYRAR-LRDGIE-VAVKVFHQECARALKSFEAQCEV-----MKSIRHPNLVK 256
IG G++G V++AR L++G VA+K + EV +++ HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 257 VISSCS---NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY----- 308
+ C+ D L L + E+ T LD + + + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVF------EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGM 344
L F H+ ++H DLKP ++L+ L+DF E +
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 345 EGQVSTRSDIYGYGIVLMETFTRK 368
+ +T D++ G + E F RK
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 201 SNLIGMGSFGSVYRA-RLRDGIEVAVKVFHQEC----ARALKSFEA--QCEVMKSIRHPN 253
S L+G G++ V A L++G E AVK+ ++ +R + E QC+ K N
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK-----N 72
Query: 254 LVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
++++I +D LV E + GS+ + + + ++ D + L++L H
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFL---H 128
Query: 314 TTPIIHCDLKPISVLLD 330
T I H DLKP ++L +
Sbjct: 129 TKGIAHRDLKPENILCE 145
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEA---QCEVMKSIRHPNLVKVIS 259
+G G++G V + + G E A+K+ + + A + V+K + HPN++K+
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 260 SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIH 319
+ LV+E G L + + F ++ + L + H I+H
Sbjct: 72 FFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVH 127
Query: 320 CDLKPISVLLD---EDMVAHLSDF 340
DLKP ++LL+ D + + DF
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDF 151
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 100
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 155
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLT 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 44/200 (22%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEV--MKSIRHPNLVKVISS 260
+G G++G+V A R G +VA+K ++ L + A E+ +K +RH N++ ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 261 CSND----DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY-----LYF 311
+ D DF L MP + T + + + + D L Y L +
Sbjct: 93 FTPDETLDDFTDFYL-VMP--------FMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY 143
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS------------- 352
H IIH DLKP ++ ++ED + DF + M G V TR
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 353 ----DIYGYGIVLMETFTRK 368
DI+ G ++ E T K
Sbjct: 204 TQTVDIWSVGCIMAEMITGK 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 101
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 156
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLT 238
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 91
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 146
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 206
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLT 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 34/198 (17%)
Query: 194 QATLRRLSNLIGMGSFGSVYRARLR-DGIEVAVK----VFHQECARALKSFEAQCEVMKS 248
Q + +RLS L G GS+G V++ R + DG AVK F RA K E K
Sbjct: 56 QQSFQRLSRL-GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH-EKV 113
Query: 249 IRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
+HP V++ + L E ++C + + Q + D L +
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEA-QVWGYLRDTLLALAH 172
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----EYG-------------------ME 345
L H+ ++H D+KP ++ L L DF E G ++
Sbjct: 173 L---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ 229
Query: 346 GQVSTRSDIYGYGIVLME 363
G T +D++ G+ ++E
Sbjct: 230 GSYGTAADVFSLGLTILE 247
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 46/205 (22%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDED---------MVAHLSDFEYGMEGQVSTRS------ 352
L + H+ IIH DLKP ++ ++ED + H D M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD---EMTGYVATRWYRAPEI 193
Query: 353 -----------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 200 LSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVKV 257
+++G G+F V A R VA+K ++ + S E + V+ I+HPN+V +
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 258 ISSCSNDDFKALVLEYMPKGSL-----ENCLYSS-TCMLDIFQRLNIMIDATSTLEYLYF 311
+ L+++ + G L E Y+ IFQ L+ ++YL
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYL-- 132
Query: 312 GHTTPIIHCDLKPISVL---LDEDMVAHLSDF 340
H I+H DLKP ++L LDED +SDF
Sbjct: 133 -HDLGIVHRDLKPENLLYYSLDEDSKIMISDF 163
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 199 RLSNLIGMGSFGSVY-RARLRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
RL IG GSFG +Y A + G EVA+K+ EC + + + K ++ +
Sbjct: 12 RLGRKIGSGSFGDIYLGANIASGEEVAIKL---ECVKTKHPQLHIESKFYKMMQGGVGIP 68
Query: 257 VISSCSND-DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
I C + D+ +V+E + SLE+ + + L + S +EY+ H+
Sbjct: 69 SIKWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSK 124
Query: 316 PIIHCDLKPISVLL 329
IH D+KP + L+
Sbjct: 125 NFIHRDVKPDNFLM 138
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 46/205 (22%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDED---------MVAHLSDFEYGMEGQVSTRS------ 352
L + H+ IIH DLKP ++ ++ED + H D M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD---EMTGYVATRWYRAPEI 193
Query: 353 -----------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 202 NLIGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
+++G G+ G++ + D +VAVK EC + E Q + +S HPN+++ +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-SFADREVQL-LRESDEHPNVIRYFCTE 87
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCD 321
+ F+ + +E + +L+ + + + ++ TS L +L H+ I+H D
Sbjct: 88 KDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRD 143
Query: 322 LKPISVLL 329
LKP ++L+
Sbjct: 144 LKPHNILI 151
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 46/205 (22%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDED---------MVAHLSDFEYGMEGQVSTRS------ 352
L + H+ IIH DLKP ++ ++ED + H D M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD---EMTGYVATRWYRAPEI 193
Query: 353 -----------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 46/205 (22%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G+ VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDED---------MVAHLSDFEYGMEGQVSTRS------ 352
L + H+ IIH DLKP ++ ++ED + H D M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD---EMTGYVATRWYRAPEI 193
Query: 353 -----------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 45/204 (22%)
Query: 204 IGMGSFGSVYRAR-LRDGIE-VAVKVFHQECARALKSFEAQCEV-----MKSIRHPNLVK 256
IG G++G V++AR L++G VA+K + EV +++ HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 257 VISSCS---NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY----- 308
+ C+ D L L + E+ T LD + + + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVF------EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGM 344
L F H+ ++H DLKP ++L+ L+DF E +
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 345 EGQVSTRSDIYGYGIVLMETFTRK 368
+ +T D++ G + E F RK
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 245 VMKSIRHPNLVKVISSCS--NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDA 302
++K + HPN+VK++ N+D +V E + +G + D Q D
Sbjct: 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYFQDL 146
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+EYL H IIH D+KP ++L+ ED ++DF
Sbjct: 147 IKGIEYL---HYQKIIHRDIKPSNLLVGEDGHIKIADF 181
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQEC--ARALK----SFEAQCEVMKSIRHPNLVKV 257
+G G+F V A + K+F +C +ALK S E + V++ I+H N+V +
Sbjct: 30 LGTGAFSEVVLAEEK----ATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 258 ISSCSNDDFKALVLEYMPKGSL-----ENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG 312
+ + LV++ + G L E Y+ + +++ L+ +Y+
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV---------LDAVYYL 136
Query: 313 HTTPIIHCDLKPISVLL---DEDMVAHLSDFEYG-MEGQVSTRSDIYGY-GIVLMETFTR 367
H I+H DLKP ++L DE+ +SDF MEG+ S G G V E +
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 368 K 368
K
Sbjct: 197 K 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 204 IGMGSFGSVYRARLRDGIEV-AVKVFH-QECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
IG GSFG VY+ EV A+K+ +E ++ + + V+ P + + S
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 262 SNDDFKALVLEYMPKGSLENCL--------YSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
+++EY+ GS + L Y +T + +I + L+ + H
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYL-------------H 133
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVS 349
+ IH D+K +VLL E L+DF G+ GQ++
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADF--GVAGQLT 167
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 45/204 (22%)
Query: 204 IGMGSFGSVYRAR-LRDGIE-VAVKVFHQECARALKSFEAQCEV-----MKSIRHPNLVK 256
IG G++G V++AR L++G VA+K + EV +++ HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 257 VISSCS---NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY----- 308
+ C+ D L L + E+ T LD + + + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVF------EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGM 344
L F H+ ++H DLKP ++L+ L+DF E +
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 345 EGQVSTRSDIYGYGIVLMETFTRK 368
+ +T D++ G + E F RK
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 87
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 142
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 77
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 132
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYG------MEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF M G V+TR
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 192
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 118
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDF 147
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 199 RLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHP 252
R NL +G G++GSV A + G VAVK Q A +++ + ++K ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHE 81
Query: 253 NLVKVIS----SCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLE 307
N++ ++ + S ++F + L ++ L N + D Q L I L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI-----LR 136
Query: 308 YLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS--------- 352
L + H+ IIH DLKP ++ ++ED + DF + M G V+TR
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 353 --------DIYGYGIVLMETFT 366
DI+ G ++ E T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G+FG R + E+ + + + ++ + + +S+RHPN+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V+EY G L+ C F + + + H + H DLK
Sbjct: 87 PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLK 142
Query: 324 PISVLLDEDMVAHL--SDFEY 342
+ LLD L +DF Y
Sbjct: 143 LENTLLDGSPAPRLKIADFGY 163
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVK-VFH--QECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G++G V+++ R G VAVK +F Q A ++F + + H N+V +++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 260 --SCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
ND LV +YM + L + ++ +L+ + ++ ++YL H+ +
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYL---HSGGL 130
Query: 318 IHCDLKPISVLLDEDMVAHLSDF 340
+H D+KP ++LL+ + ++DF
Sbjct: 131 LHRDMKPSNILLNAECHVKVADF 153
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
RL IG GSFG +Y + G EVA+K+ EC + + ++ K ++ +
Sbjct: 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYKMMQGGVGIP 68
Query: 257 VISSCSND-DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
I C + D+ +V+E + SLE+ + + L + S +EY+ H+
Sbjct: 69 TIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSK 124
Query: 316 PIIHCDLKPISVLL 329
IH D+KP + L+
Sbjct: 125 NFIHRDVKPDNFLM 138
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 11/168 (6%)
Query: 181 RGLDVSNDGILPSQATLRRLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALKSF 239
R LD + L A + L L+G G++G VY+ R ++ G A+KV +
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEI 67
Query: 240 EAQCEVMKSIRHPNLVKVISSC-------SNDDFKALVLEYMPKGSLENCLYSSTCMLDI 292
+ + ++K H + DD LV+E+ GS+ + + ++ +
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NT 125
Query: 293 FQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ I L L H +IH D+K +VLL E+ L DF
Sbjct: 126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDF 173
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 88/225 (39%), Gaps = 60/225 (26%)
Query: 199 RLSNLIGMGSFGSVYRA------RLRDGIEVAVKVFHQEC-ARALKSFEAQCEVMKSI-R 250
++G G+FG V A + I+VAVK+ ++ + ++ ++ ++M +
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 251 HPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-------------YSSTCMLDIFQRLN 297
H N+V ++ +C+ L+ EY G L N L Y + L+ + LN
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 298 IM---------IDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------- 340
++ +E+L F +H DL +VL+ V + DF
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 341 -------------------EYGMEGQVSTRSDIYGYGIVLMETFT 366
E EG + +SD++ YGI+L E F+
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 47/212 (22%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 97
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-YSSTCMLDI-----FQRLNIMID 301
+ +H N+V ++ +C++ ++ EY G L N L + LD + +++
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV--- 348
++ + + F + IH D+ +VLL VA + DF Y ++G
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 349 --------------STRSDIYGYGIVLMETFT 366
+ +SD++ YGI+L E F+
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVFHQECARALK-SFEAQCEVMKSIRHPNLVK 256
RL IG GSFG +Y + G EVA+K+ EC + + ++ K ++ +
Sbjct: 10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQLHIESKIYKMMQGGVGIP 66
Query: 257 VISSCSND-DFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
I C + D+ +V+E + SLE+ + + L + S +EY+ H+
Sbjct: 67 TIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSK 122
Query: 316 PIIHCDLKPISVLL 329
IH D+KP + L+
Sbjct: 123 NFIHRDVKPDNFLM 136
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 41/203 (20%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVA---VKVFHQECARALKSFEAQCEV-----MKSIRHPNL 254
IG+G++G+VY+AR G VA V+V + EV +++ HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 255 VKVISSC----SNDDFK-ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
V+++ C ++ + K LV E++ + + L ++M L++L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------------EYGME 345
H I+H DLKP ++L+ L+DF E ++
Sbjct: 137 ---HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ 193
Query: 346 GQVSTRSDIYGYGIVLMETFTRK 368
+T D++ G + E F RK
Sbjct: 194 STYATPVDMWSVGCIFAEMFRRK 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 47/212 (22%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 105
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-YSSTCMLDI-----FQRLNIMID 301
+ +H N+V ++ +C++ ++ EY G L N L + LD + +++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV--- 348
++ + + F + IH D+ +VLL VA + DF Y ++G
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 349 --------------STRSDIYGYGIVLMETFT 366
+ +SD++ YGI+L E F+
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQ--ECARALKSFEAQCEVMKSIRHPNLVKVIS- 259
IG G++G V AR R G +VA+K + K + +++K +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 260 ---SCSNDDFKAL--VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ +FK++ VL+ M + L ++SS + R + L L + H+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLY----QLLRGLKYMHS 176
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
+IH DLKP ++L++E+ + DF
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDF 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V + + G A+K+ +E A + V+++ RHP L +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
S D V+EY G L L + R + S L+YL+ +
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 270
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ DLK +++LD+D ++DF EG
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEG 299
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V + + G A+K+ +E A + V+++ RHP L +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
S D V+EY G L L + R + S L+YL+ +
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 273
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ DLK +++LD+D ++DF EG
Sbjct: 274 VYRDLKLENLMLDKDGHIKITDFGLCKEG 302
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
LIG G FG V++A+ R DG ++ +A E + + + + H N+V + C
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHY-NGC 73
Query: 262 ----------SNDDFKA--------------------LVLEYMPKGSLENCLYSSTC-ML 290
S+D ++ + +E+ KG+LE + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 291 DIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
D L + T ++Y+ H+ +IH DLKP ++ L + + DF
Sbjct: 134 DKVLALELFEQITKGVDYI---HSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQ--ECARALKSFEAQCEVMKSIRHPNLVKVIS- 259
IG G++G V AR R G +VA+K + K + +++K +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 260 ---SCSNDDFKAL--VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+ +FK++ VL+ M + L ++SS + R + L L + H+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLY----QLLRGLKYMHS 177
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
+IH DLKP ++L++E+ + DF
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDF 203
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 190 ILPSQATLRRL--SNLIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQC 243
+L T++R +G G F Y D EV A KV + + +
Sbjct: 18 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI 77
Query: 244 EVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDAT 303
+ KS+ +P++V +DDF +VLE + SL L++ +R + +
Sbjct: 78 AIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKAVTEPE 127
Query: 304 S------TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ T++ + + H +IH DLK ++ L++DM + DF
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 170
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 204 IGMGSFGSVYRARL-RDGIE---VAVKVFHQECARALKSFEAQCEVM--KSIRHPNLVKV 257
IG G+FG ARL RD + VAVK + A Q E++ +S+RHPN+V+
Sbjct: 28 IGSGNFGV---ARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRF 81
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
A+++EY G LY C F L + + H+ I
Sbjct: 82 KEVILTPTHLAIIMEYASGGE----LYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYG 343
H DLK + LLD L ++G
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFG 163
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 203 LIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
++G G+F V+ + R G A+K + A S E + V+K I+H N+V +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 262 SNDDFKALVLEYMPKGS-----LENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTP 316
+ LV++ + G LE +Y+ + Q++ S ++YL H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV------LSAVKYL---HENG 126
Query: 317 IIHCDLKPISVLL---DEDMVAHLSDF 340
I+H DLKP ++L +E+ ++DF
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDF 153
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 53/218 (24%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 105
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL---------YSSTCMLDIFQRL-- 296
+ +H N+V ++ +C++ ++ EY G L N L YS + ++L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 297 -NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGME 345
+++ ++ + + F + IH D+ +VLL VA + DF Y ++
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 346 GQV-----------------STRSDIYGYGIVLMETFT 366
G + +SD++ YGI+L E F+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 190 ILPSQATLRRL--SNLIGMGSFGSVYRARLRDGIEV-AVKVF--------HQECARALKS 238
+L T++R +G G F Y D EV A KV HQ+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EK 88
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ + KS+ +P++V +DDF +VLE + SL L++ +R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKA 138
Query: 299 MIDATS------TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ + + T++ + + H +IH DLK ++ L++DM + DF
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 190 ILPSQATLRRL--SNLIGMGSFGSVYRARLRDGIEV-AVKVF--------HQECARALKS 238
+L T++R +G G F Y D EV A KV HQ+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EK 88
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ + KS+ +P++V +DDF +VLE + SL L++ +R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKA 138
Query: 299 MIDATS------TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ + + T++ + + H +IH DLK ++ L++DM + DF
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 190 ILPSQATLRRL--SNLIGMGSFGSVYRARLRDGIEV-AVKVF--------HQECARALKS 238
+L T++R +G G F Y D EV A KV HQ+ +
Sbjct: 34 VLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-----EK 88
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNI 298
+ + KS+ +P++V +DDF +VLE + SL L++ +R
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL----------LELHKRRKA 138
Query: 299 MIDATS------TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ + + T++ + + H +IH DLK ++ L++DM + DF
Sbjct: 139 VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF 186
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 191 LPSQATLRRLS--NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCE 244
L S+ T+ L+G G+FG V + + G A+K+ +E A +
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 245 VMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATS 304
V+++ RHP L + S D V+EY G L L + R + S
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVS 119
Query: 305 TLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
L+YL+ +++ DLK +++LD+D ++DF EG
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 159
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 36/173 (20%)
Query: 194 QATLRRLSNL--IGMGSFGSVYRARLRD-GIEVAVKVFH-----QECARALKSFEAQCEV 245
QA + L NL +G G+ G V++ R R G +AVK +E R L + V
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV---V 77
Query: 246 MKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN-------- 297
+KS P +V+ + + + +E M TC + +R+
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDVFIAMELM-----------GTCAEKLKKRMQGPIPERIL 126
Query: 298 --IMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQV 348
+ + L YL H +IH D+KP ++LLDE L DF G+ G++
Sbjct: 127 GKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDF--GISGRL 175
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V + + G A+K+ +E A + V+++ RHP L +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
S D V+EY G L L + R + S L+YL+ +
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 132
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ DLK +++LD+D ++DF EG
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEG 161
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 202 NLIGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE---AQCEVMKSIRHPNLVKV 257
L+G G+FG V + + G A+K+ +E A + V+++ RHP L +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
S D V+EY G L L + R + S L+YL+ +
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNV 131
Query: 318 IHCDLKPISVLLDEDMVAHLSDFEYGMEG 346
++ DLK +++LD+D ++DF EG
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEG 160
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 12/146 (8%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQE-----CA---RALKSFEAQCEVMKSIRHPNL 254
+G G+FG V+ A ++ EV VK +E C L + ++ + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
+KV+ N F LV+E G LD I S + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL---RL 148
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDF 340
IIH D+K ++++ ED L DF
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDF 174
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G+ G V A R E VAVK+ + RA+ ++ + + + K + H N+V
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 119
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 199 RLSNLIGMGSFGSVYRAR-LRDGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHPNL 254
R+ ++ G F VY A+ + G E A+K +E RA+ + C + K HPN+
Sbjct: 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHPNI 88
Query: 255 VKVISSCS-----NDDFKA--LVLEYMPKGSLENCL--YSSTCMLDIFQRLNIMIDATST 305
V+ S+ S +D +A L+L + KG L L S L L I
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+++++ PIIH DLK ++LL L DF
Sbjct: 149 VQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 19 DIGNLKAVV---EINLSRNNLSSDMPATIGGLISLKTLSLAYNKL---------DVASLE 66
DI NL A+V E+ LS N L P + GL SL+ L L + ++ D+ SLE
Sbjct: 170 DIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 67 ILNLSNNEIYGL 78
LNLS+N + L
Sbjct: 230 ELNLSHNNLMSL 241
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 187 NDGILPSQATLRRLSNLIGMGSFGSVYRARLRDGIE---VAVK----VFHQ--ECARALK 237
+D +P + +R +LIG GS+G V A D +E VA+K VF +C R L+
Sbjct: 47 SDWQIPDRYEIR---HLIGTGSYGHVCEAY--DKLEKRVVAIKKILRVFEDLIDCKRILR 101
Query: 238 SFEAQCEVMKSIRHPNLVKVISSCSNDD---FKALVLEYMPKGSLENCLYSSTCMLDIFQ 294
+ ++ + H ++VKV+ D F L + S L+ + L
Sbjct: 102 ----EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELH 157
Query: 295 RLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
++ + ++Y+ H+ I+H DLKP + L+++D + DF
Sbjct: 158 IKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDF 200
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQECARAL---KSFEAQCEVMKSIRHPNLV 255
L +G G++G V A R E VAVK+ + RA+ ++ + + + + H N+V
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG--- 312
K + + L LEY G L + + M + DA L G
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP--------DAQRFFHQLMAGVVY 120
Query: 313 -HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H I H D+KP ++LLDE +SDF
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDF 149
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 12/72 (16%)
Query: 19 DIGNLKAVV---EINLSRNNLSSDMPATIGGLISLKTLSLAYNKL---------DVASLE 66
DI NL A+V E+ LS N L P + GL SL+ L L + ++ D+ SLE
Sbjct: 170 DIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 67 ILNLSNNEIYGL 78
LNLS+N + L
Sbjct: 230 ELNLSHNNLMSL 241
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 6/141 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G+FG R + E+ + + + + + + +S+RHPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V+EY G L+ C F + + + H + H DLK
Sbjct: 87 PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLK 142
Query: 324 PISVLLDEDMVAHLS--DFEY 342
+ LLD L DF Y
Sbjct: 143 LENTLLDGSPAPRLKICDFGY 163
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 50/208 (24%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIEV--AVKVFHQECARAL-----KSFEAQCEVMKSIRH 251
L IG GS+G V R + + A+K+ ++ R + + + + +MK + H
Sbjct: 29 HLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCL------YSSTCMLDI------------- 292
PN+ ++ ++ + LV+E G L + L + C +D+
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 293 ----------------FQR----LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDED 332
QR NIM S L YL H I H D+KP + L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL---HNQGICHRDIKPENFLFSTN 204
Query: 333 MVAHLSDFEYGMEGQVSTRSDIYGYGIV 360
+ ++G+ + ++ YG+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVF---HQECARALKSFEAQCEVMKSIRHPNLVKVIS 259
+G G FG V+ A+ + D A+K ++E AR + + + + + HP +V+ +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLEHPGIVRYFN 70
Query: 260 SCSNDDFKALVLEYMPKGSL---------ENC--LYSSTCMLDIFQR---LNIMIDATST 305
+ + + PK L EN + C ++ +R L+I +
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 306 LEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+E+L H+ ++H DLKP ++ D V + DF
Sbjct: 131 VEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDF 162
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFE--AQCEVMKSIRHPNLVKVISS 260
+G G++G V R + +E A+K+ + + + + V+K + HPN++K+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHC 320
+ LV+E G L + F ++ + L + + H I+H
Sbjct: 105 FEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 321 DLKPISVLL---DEDMVAHLSDF 340
DLKP ++LL ++D + + DF
Sbjct: 161 DLKPENLLLESKEKDALIKIVDF 183
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 45/211 (21%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE-VAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
+L +L+G G++G V A + E VA+K + AL++ + +++K +H N++
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYS--STCMLDIFQRLNIMIDATSTLEYLYFGH 313
+ + D F+ Y+ + ++ L+ ST ML +I TL + H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLH 129
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS-- 352
+ +IH DLKP ++L++ + + DF + GM V+TR
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 353 ---------------DIYGYGIVLMETFTRK 368
D++ G +L E F R+
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 35/166 (21%)
Query: 181 RGLDVSNDGILPSQATLRRLSNLIGMGSFGSVYRARLRDGIEVAVKVFHQECA---RAL- 236
+ + SNDG + IG GSF +VY+ G++ V C R L
Sbjct: 17 KAVGXSNDG------RFLKFDIEIGRGSFKTVYK-----GLDTETTVEVAWCELQDRKLT 65
Query: 237 ----KSFEAQCEVMKSIRHPNLVKVI----SSCSNDDFKALVLEYMPKGSLENCLYSSTC 288
+ F+ + E +K ++HPN+V+ S+ LV E G+L+
Sbjct: 66 KSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKT------- 118
Query: 289 MLDIFQRLNIMI---DATSTLEYLYFGHTT--PIIHCDLKPISVLL 329
L F+ I + L+ L F HT PIIH DLK ++ +
Sbjct: 119 YLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 204 IGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVIS--- 259
+G G G V+ A D VA+K +++K + ++++ + H N+VKV
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 260 ---SCSNDDFKAL--------VLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
S DD +L V EYM + L N L +L+ RL M L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 309 LYFGHTTPIIHCDLKPISVLLD-EDMVAHLSDF 340
+ H+ ++H DLKP ++ ++ ED+V + DF
Sbjct: 136 I---HSANVLHRDLKPANLFINTEDLVLKIGDF 165
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 45/211 (21%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE-VAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
+L +L+G G++G V A + E VA+K + AL++ + +++K +H N++
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYS--STCMLDIFQRLNIMIDATSTLEYLYFGH 313
+ + D F+ Y+ + ++ L+ ST ML +I TL + H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLH 129
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF-------------------EYGMEGQVSTRS-- 352
+ +IH DLKP ++L++ + + DF + GM V+TR
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 353 ---------------DIYGYGIVLMETFTRK 368
D++ G +L E F R+
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G+FG R + E+ + + + ++ + + +S+RHPN+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V+EY G L+ C F + + + H + H DLK
Sbjct: 86 PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLK 141
Query: 324 PISVLLDEDMVAHLS--DFEY 342
+ LLD L DF Y
Sbjct: 142 LENTLLDGSPAPRLKICDFGY 162
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G+FG R + E+ + + + ++ + + +S+RHPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V+EY G L+ C F + + + H + H DLK
Sbjct: 87 PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLK 142
Query: 324 PISVLLD 330
+ LLD
Sbjct: 143 LENTLLD 149
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 203 LIGMGSFGSVYRA---RLRDGIEVAV----KVFHQECARALKSFEAQCEVMKSIRHPNLV 255
+IG GSFG V +A ++ + + + K FH++ A ++ E ++ N +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNTM 159
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID---ATSTLEYLYFG 312
VI N F+ + M L LY + FQ ++ + A S L+ L
Sbjct: 160 NVIHMLENFTFRNHIC--MTFELLSMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDFEYG 343
H IIHCDLKP ++LL + + + ++G
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV----AVKVFHQ----ECARALKSFEAQCEVMKSIRH 251
L ++G G++G V+ R G + A+KV + + A+ + + +V++ IR
Sbjct: 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 117
Query: 252 -PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
P LV + + + L+L+Y+ G L ++ + F + I + L
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H II+ D+K ++LLD + L+DF
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDF 203
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
IG G+FG R + E+ + + + ++ + + +S+RHPN+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLK 323
A+V+EY G L+ C F + + + H + H DLK
Sbjct: 87 PTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLK 142
Query: 324 PISVLLD 330
+ LLD
Sbjct: 143 LENTLLD 149
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG+GS+ R + +E AVK+ + + E +++ +HPN++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHPNIITLKDVYD 86
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +V E M G L + + + + ++ T T+EYL H ++H DL
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYL---HAQGVVHRDL 142
Query: 323 KPISVL-LDE 331
KP ++L +DE
Sbjct: 143 KPSNILYVDE 152
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 203 LIGMGSFGSVYRA---RLRDGIEVAV----KVFHQECARALKSFEAQCEVMKSIRHPNLV 255
+IG GSFG V +A ++ + + + K FH++ A ++ E ++ N +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNTM 159
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMI---DATSTLEYLYFG 312
VI N F+ + M L LY + FQ ++ + A S L+ L
Sbjct: 160 NVIHMLENFTFRNHIC--MTFELLSMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDFEYG 343
H IIHCDLKP ++LL + + + ++G
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 200 LSNLIGMGSFGSVYR-----ARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNL 254
+ +L+G GS+G V R +++ K + + + + ++++ +RH N+
Sbjct: 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD--------IFQRLNIMIDATSTL 306
++++ N++ + + YM +E C+ MLD + Q L
Sbjct: 69 IQLVDVLYNEEKQKM---YM---VMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122
Query: 307 EYLYFGHTTPIIHCDLKPISVLL 329
EYL H+ I+H D+KP ++LL
Sbjct: 123 EYL---HSQGIVHKDIKPGNLLL 142
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVM--KSIRHPNLVKVISS 260
+G G++GSV A R G +VA+K + + + A E++ K ++H N++ ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 261 CSNDDFKALVLEYMPKGSLENCLYSSTCMLDI----FQRLNIMIDATSTLEYLYFG---- 312
+ P SL N Y ++ Q++ M + ++YL +
Sbjct: 110 ------------FTPASSLRN-FYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 313 ----HTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS---------- 352
H+ ++H DLKP ++ ++ED + DF + M G V TR
Sbjct: 157 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSW 216
Query: 353 -------DIYGYGIVLMETFTRK 368
DI+ G ++ E T K
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE-VAVKVFH--QECARALKSFEAQCEVMKSIRHPNLV 255
+L +L+G G++G V A + E VA+K + AL++ + +++K +H N++
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENII 72
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYS--STCMLDIFQRLNIMIDATSTLEYLYFGH 313
+ + D F+ Y+ + ++ L+ ST ML +I TL + H
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLH 129
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ +IH DLKP ++L++ + + DF
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDF 156
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ + R
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFR 81
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 82 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 137 RGLKYI---HSANVLHRDLKPSNLLLNTTSDLKICDF 170
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 49/202 (24%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVM--KSIRHPNLVKVISS 260
+G G++GSV A R G +VA+K + + + A E++ K ++H N++ ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 261 CSNDDFKALVLEYMPKGSLENCL-------YSSTCMLDI----FQRLNIMIDATSTLEYL 309
+ P SL N + T + I F I L+ L
Sbjct: 92 ------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 310 YFGHTTPIIHCDLKPISVLLDEDMVAHLSDF------EYGMEGQVSTRS----------- 352
+ H+ ++H DLKP ++ ++ED + DF + M G V TR
Sbjct: 140 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWM 199
Query: 353 ------DIYGYGIVLMETFTRK 368
DI+ G ++ E T K
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 80 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 135 RGLKYI---HSANVLHRDLKPSNLLLNTTXDLKIXDF 168
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ + R
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLAFR 81
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 82 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 137 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 170
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 176 TKCGKRGLDVSNDGILPSQATLRRL---SNLIGMGSFGSVYRARLRDGIEVAVK-VFHQE 231
++ GK+G I + +L+ L ++G GS G+V G VAVK +
Sbjct: 10 SRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF 69
Query: 232 CARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD 291
C AL + E S HPN+++ S + D F + LE + +L++ L S + D
Sbjct: 70 CDIALMEIKLLTE---SDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQD-LVESKNVSD 124
Query: 292 IFQRLNIMIDATSTLEYLYFG----HTTPIIHCDLKPISVLL 329
+L + S L + G H+ IIH DLKP ++L+
Sbjct: 125 ENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 204 IGMGSFGSVYRARLRDGIE-VAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
+G G+ VYR + + + A+KV + + K + V+ + HPN++K+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 263 NDDFKALVLEYMPKGSL-----ENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPI 317
+LVLE + G L E YS D +++ LE + + H I
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI---------LEAVAYLHENGI 169
Query: 318 IHCDLKPISVL 328
+H DLKP ++L
Sbjct: 170 VHRDLKPENLL 180
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 80 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 135 RGLKYI---HSANVLHRDLKPSNLLLNTTXDLKICDF 168
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 80 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 135 RGLKYI---HSANVLHRDLKPSNLLLNTTXDLKICDF 168
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+KV++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKVVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFE-AQCE---VMKSIRHPNL 254
L +IG GS+ V RL+ + A+KV +E + + Q E ++ HP L
Sbjct: 24 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
V + S + V+EY+ G L + + + R + + L YL H
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYL---HE 139
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDFEYGM 344
II+ DLK +VLLD + H+ +YGM
Sbjct: 140 RGIIYRDLKLDNVLLDSE--GHIKLTDYGM 167
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 176 TKCGKRGLDVSNDGILPSQATLRRL---SNLIGMGSFGSVYRARLRDGIEVAVK-VFHQE 231
++ GK+G I + +L+ L ++G GS G+V G VAVK +
Sbjct: 10 SRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF 69
Query: 232 CARALKSFEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD 291
C AL + E S HPN+++ S + D F + LE + +L++ L S + D
Sbjct: 70 CDIALMEIKLLTE---SDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQD-LVESKNVSD 124
Query: 292 IFQRLNIMIDATSTLEYLYFG----HTTPIIHCDLKPISVLL 329
+L + S L + G H+ IIH DLKP ++L+
Sbjct: 125 ENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV 166
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ------ECARALKSFEAQCEVMKSIRHP 252
+ +LIG GS+G VY A ++ + VA+K ++ +C R L+ + ++ ++
Sbjct: 32 IKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR----EITILNRLKSD 87
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY-- 310
++++ +D Y+ L + L + I + LY
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYI-------VLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 311 -----FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSDIY 355
F H + IIH DLKP + LL++D + DF G+ +++ DI+
Sbjct: 141 LLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDF--GLARTINSDKDIH 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 29/158 (18%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 99
Query: 251 HPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
H N++ + ND +A +E M L L + D+++ L + + Y
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGA----DLYKLLKTQHLSNDHICYFL 150
Query: 311 FG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ H+ ++H DLKP ++LL+ + DF
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDF 188
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 60/225 (26%)
Query: 199 RLSNLIGMGSFGSVYRARL-----RDGI-EVAVKVF----HQECARALKSFEAQCEVMKS 248
+ +G G+FG V A D + +VAVK+ H + AL S + ++M
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSH 90
Query: 249 I-RHPNLVKVISSCSNDDFKALVLEYMPKGSLENCL-YSSTCMLD--------------- 291
+ +H N+V ++ +C++ ++ EY G L N L + ML
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 292 ---IFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF-------- 340
+ +++ ++ + + F + IH D+ +VLL VA + DF
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 341 --EYGMEGQV-----------------STRSDIYGYGIVLMETFT 366
Y ++G + +SD++ YGI+L E F+
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTXDLKICDF 172
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFE-AQCE---VMKSIRHPNL 254
L +IG GS+ V RL+ + A+KV +E + + Q E ++ HP L
Sbjct: 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
V + S + V+EY+ G L + + + R + + L YL H
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYL---HE 128
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDFEYGM 344
II+ DLK +VLLD + H+ +YGM
Sbjct: 129 RGIIYRDLKLDNVLLDSE--GHIKLTDYGM 156
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFE-AQCE---VMKSIRHPNL 254
L +IG GS+ V RL+ + A+KV +E + + Q E ++ HP L
Sbjct: 9 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
V + S + V+EY+ G L + + + R + + L YL H
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYL---HE 124
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDFEYGM 344
II+ DLK +VLLD + H+ +YGM
Sbjct: 125 RGIIYRDLKLDNVLLDSE--GHIKLTDYGM 152
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-VAVKVFHQ------ECARALKSFEAQCEVMKSIRHP 252
+ +LIG GS+G VY A ++ + VA+K ++ +C R L+ + ++ ++
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR----EITILNRLKSD 85
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY-- 310
++++ DD Y+ L + L + I + LY
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYI-------VLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 311 -----FGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVSTRSD 353
F H + IIH DLKP + LL++D + DF G+ +++ D
Sbjct: 139 LLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDF--GLARTINSEKD 184
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 81
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 82 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 137 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 170
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 77
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 78 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 133 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 166
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 84
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 85 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 140 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 173
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 85
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 86 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 140
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 141 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 174
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 76
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 77 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 131
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 132 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 165
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 99
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 100 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 154
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 155 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 188
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 172
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 172
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 77
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 78 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 133 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 166
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 84
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 85 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 140 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 87
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 88 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 142
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 143 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 176
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 80 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 135 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 168
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 17/151 (11%)
Query: 203 LIGMGSFGSVYRA---RLRDGIEVAV----KVFHQECARALKSFEAQCEVMKSIRHPNLV 255
+IG G FG V +A ++ + + + K FH++ A ++ E ++ N +
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNTM 159
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID---ATSTLEYLYFG 312
VI N F+ + M L LY + FQ ++ + A S L+ L
Sbjct: 160 NVIHMLENFTFRNHIC--MTFELLSMNLYE-LIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDFEYG 343
H IIHCDLKP ++LL + + + ++G
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 80 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 135 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 168
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME---GQVSTRS 352
S LE+L H II+ DLKP +VLLD+D +SD +E GQ T+
Sbjct: 300 SGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I HQ C R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDF 172
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME---GQVSTRS 352
S LE+L H II+ DLKP +VLLD+D +SD +E GQ T+
Sbjct: 300 SGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 201 SNLIGMGSFGSVYRARLRD-GIEVAVKVFH-----QECARALKSFEAQCEVMKSIRHPNL 254
S +G G F V + + G E A K Q+C + A E+ KS P +
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC--PRV 91
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRL---NIMIDATSTLEYLYF 311
+ + N L+LEY G + S C+ ++ + + +++ LE +Y+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEI-----FSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 312 GHTTPIIHCDLKPISVLL 329
H I+H DLKP ++LL
Sbjct: 147 LHQNNIVHLDLKPQNILL 164
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFE-AQCE---VMKSIRHPNL 254
L +IG GS+ V RL+ + A++V +E + + Q E ++ HP L
Sbjct: 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 255 VKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHT 314
V + S + V+EY+ G L + + + R + + L YL H
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYL---HE 171
Query: 315 TPIIHCDLKPISVLLDEDMVAHLSDFEYGM 344
II+ DLK +VLLD + H+ +YGM
Sbjct: 172 RGIIYRDLKLDNVLLDSE--GHIKLTDYGM 199
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME---GQVSTRS 352
S LE+L H II+ DLKP +VLLD+D +SD +E GQ T+
Sbjct: 300 SGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+KV++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKVVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+KV++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKVVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDFEYGME---GQVSTRS 352
S LE+L H II+ DLKP +VLLD+D +SD +E GQ T+
Sbjct: 300 SGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+KV++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKVVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 230 QECARALKSF-EAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC 288
+ C+ + +F + + V K HPN+V ++ D+ +V +M GS ++ + T
Sbjct: 63 EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTH 120
Query: 289 MLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLS 338
+D L I L+ L + H +H +K +L+ D +LS
Sbjct: 121 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 29/158 (18%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ C R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYSSTCMLDIFQRL---NIMIDA 302
H N++ + ND +A +E Y+ + +E LY L Q L +I
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKCQHLSNDHICYFL 134
Query: 303 TSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L L + H+ ++H DLKP ++LL+ + DF
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDF 172
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 230 QECARALKSF-EAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTC 288
+ C+ + +F + + V K HPN+V ++ D+ +V +M GS ++ + T
Sbjct: 47 EACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTH 104
Query: 289 MLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLS 338
+D L I L+ L + H +H +K +L+ D +LS
Sbjct: 105 FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 154
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVK-VFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
++G GS G+V G VAVK + C AL + E S HPN+++ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCSE 78
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG----HTTPI 317
+ D F + LE + +L++ L S + D +L + S L + G H+ I
Sbjct: 79 TTDRFLYIALE-LCNLNLQD-LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 136
Query: 318 IHCDLKPISVLL 329
IH DLKP ++L+
Sbjct: 137 IHRDLKPQNILV 148
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 203 LIGMGSFGSVYRARLRDGIEVAVK-VFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
++G GS G+V G VAVK + C AL + E S HPN+++ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCSE 78
Query: 262 SNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFG----HTTPI 317
+ D F + LE + +L++ L S + D +L + S L + G H+ I
Sbjct: 79 TTDRFLYIALE-LCNLNLQD-LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 136
Query: 318 IHCDLKPISVLL 329
IH DLKP ++L+
Sbjct: 137 IHRDLKPQNILV 148
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRH---- 251
+ +IG G FG VY R D G A+K ++ + +K E +M S+
Sbjct: 192 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDC 250
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V + + D + +L+ M G L L +F ++ A + L
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 306
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSD 339
H +++ DLKP ++LLDE +SD
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISD 334
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRH---- 251
+ +IG G FG VY R D G A+K ++ + +K E +M S+
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDC 251
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V + + D + +L+ M G L L +F ++ A + L
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSD 339
H +++ DLKP ++LLDE +SD
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISD 335
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 15/139 (10%)
Query: 204 IGMGSFGSVYRAR-LRDGIEVAVK--VFHQECARALKSFEAQCEVMKSIRHPNLVKVISS 260
+G G F V L DG A+K + H++ R EA ++ + HPN++++++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREA--DMHRLFNHPNILRLVAY 94
Query: 261 CSND----DFKALVLEYMPKGSLEN---CLYSSTCMLDIFQRLNIMIDATSTLEYLYFGH 313
C + L+L + +G+L N L L Q L +++ LE + H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---H 151
Query: 314 TTPIIHCDLKPISVLLDED 332
H DLKP ++LL ++
Sbjct: 152 AKGYAHRDLKPTNILLGDE 170
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRH---- 251
+ +IG G FG VY R D G A+K ++ + +K E +M S+
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDC 251
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V + + D + +L+ M G L L +F ++ A + L
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSD 339
H +++ DLKP ++LLDE +SD
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISD 335
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 200 LSNLIGMGSFGSVYRARLRD-GIEVAVKVFHQECARALKSFEAQC---EVMKSIRH---- 251
+ +IG G FG VY R D G A+K ++ + +K E +M S+
Sbjct: 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-MKQGETLALNERIMLSLVSTGDC 251
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYF 311
P +V + + D + +L+ M G L L +F ++ A + L
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 312 GHTTPIIHCDLKPISVLLDEDMVAHLSD 339
H +++ DLKP ++LLDE +SD
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISD 335
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQC-----EVMKSIRHPNLVK 256
+IG G+FG V +L++ +V A+K+ ++ LK E C +V+ + +
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNK--WEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 257 VISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLD------IFQRLNIMIDATSTLEYLY 310
+ + +D+ LV++Y G L L L + I ID+ L Y
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 311 FGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+H D+KP ++L+D + L+DF
Sbjct: 197 -------VHRDIKPDNILMDMNGHIRLADF 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG+GS+ R + +E AVKV + + E +++ +HPN++ +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDVYD 91
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ LV E M G L + + + ++ T+EYL H+ ++H DL
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL---HSQGVVHRDL 147
Query: 323 KPISVL-LDE 331
KP ++L +DE
Sbjct: 148 KPSNILYVDE 157
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG+GS+ R + +E AVKV + + E +++ +HPN++ +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDVYD 91
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ LV E M G L + + + ++ T+EYL H+ ++H DL
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYL---HSQGVVHRDL 147
Query: 323 KPISVL-LDE 331
KP ++L +DE
Sbjct: 148 KPSNILYVDE 157
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 204 IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCS 262
IG+GS+ R E AVK+ + + E +++ +HPN++ +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQHPNIITLKDVYD 86
Query: 263 NDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTTPIIHCDL 322
+ + +V E G L + + + + ++ T T+EYL H ++H DL
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYL---HAQGVVHRDL 142
Query: 323 KPISVL-LDE 331
KP ++L +DE
Sbjct: 143 KPSNILYVDE 152
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 204 IGMGSFGSVYRA-----RLRDGIEVAVKVFHQE-CARALKSFEAQCEVMKSIRHPNLVKV 257
IG G++G V A + R I+ HQ C R L+ + +++ RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQILLRFRHENVIGI 106
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN--IMIDATSTLEYLYFGHTT 315
+A+ Y+ + +E LY +L Q N I L L + H+
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILRGLKYIHSA 163
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
++H DLKP ++L++ + DF
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDF 188
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 20 IGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNK---------LDVASLEILNL 70
G L +V++ L RN L+ P G ++ L L NK L + L+ LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 71 SNNEIYGLIP 80
+N+I ++P
Sbjct: 110 YDNQISCVMP 119
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 38/182 (20%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF--------EYGMEGQVS 349
+ YL + H+ IIH DLKP ++++ D + DF + ME +V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 350 TR 351
TR
Sbjct: 188 TR 189
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 38/182 (20%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF--------EYGMEGQVS 349
+ YL + H+ IIH DLKP ++++ D + DF + ME +V
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV 187
Query: 350 TR 351
TR
Sbjct: 188 TR 189
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 159
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDHEL 183
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 199 RLSNLIGMGSFGSVYRA-RLRDGIEVAVKV 227
RL L+G G FG+V+ RL D ++VA+KV
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKV 63
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 139
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHEL 163
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 140
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDHEL 164
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 139
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHEL 163
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMKSI------RHPNLV 255
++G GSFG V + + E+ AVK+ ++ ++ + +C +++ + P L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVV--IQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
++ S D V+EY+ G L +Y + F+ + + A L+F +
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
II+ DLK +V+LD + ++DF
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADF 165
>pdb|3DBR|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
pdb|3DBR|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190gln-Nedd8ala72arg)
Length = 434
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF Q
Sbjct: 124 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAQ 182
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 183 VILPGMTACIECTLELYPPQVN 204
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 252 PNLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
PN+VK++ + K +L+ EY+ + LY + DI + ++ A L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFK-VLYPTLTDYDIRYYIYELLKA------L 138
Query: 310 YFGHTTPIIHCDLKPISVLLDEDM 333
+ H+ I+H D+KP +V++D ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHEL 162
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 27/76 (35%)
Query: 318 IHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV-----------------ST 350
IH DL ++LL E+ V + DF +Y +G ST
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 351 RSDIYGYGIVLMETFT 366
+SD++ YG++L E F+
Sbjct: 281 KSDVWSYGVLLWEIFS 296
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMKSI------RHPNLV 255
++G GSFG V + + E+ AVK+ ++ ++ + +C +++ + P L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVV--IQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 256 KVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLYFGHTT 315
++ S D V+EY+ G L +Y + F+ + + A L+F +
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 316 PIIHCDLKPISVLLDEDMVAHLSDF 340
II+ DLK +V+LD + ++DF
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADF 486
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G F + D EV A K+ + + + + +S+ H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID--ATSTLEYLYFG---- 312
++DF +VLE + SL L++ +R + + A L + G
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTEPEARYYLRQIVLGCQYL 155
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H +IH DLK ++ L+ED+ + DF
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDF 183
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G F + D EV A K+ + + + + +S+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID--ATSTLEYLYFG---- 312
++DF +VLE + SL L++ +R + + A L + G
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H +IH DLK ++ L+ED+ + DF
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDF 161
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G F + D EV A K+ + + + + +S+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID--ATSTLEYLYFG---- 312
++DF +VLE + SL L++ +R + + A L + G
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTEPEARYYLRQIVLGCQYL 133
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H +IH DLK ++ L+ED+ + DF
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDF 161
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MK 247
L+R NL IG G+ G V Y A L VA+K + + A E+ MK
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDAT 303
+ H N++ +++ + P+ +LE +Y ++D + Q + + +D
Sbjct: 79 XVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH- 125
Query: 304 STLEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G F + D EV A K+ + + + + +S+ H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID--ATSTLEYLYFG---- 312
++DF +VLE + SL L++ +R + + A L + G
Sbjct: 108 GFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTEPEARYYLRQIVLGCQYL 157
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H +IH DLK ++ L+ED+ + DF
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDF 185
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 73
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 74 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 129
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 172
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 20/148 (13%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQEC---ARALKSFEAQCEVMKSIRHPNLVKVI 258
+G G F + D EV A K+ + + + + +S+ H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 259 SSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID--ATSTLEYLYFG---- 312
++DF +VLE + SL L++ +R + + A L + G
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTEPEARYYLRQIVLGCQYL 137
Query: 313 HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
H +IH DLK ++ L+ED+ + DF
Sbjct: 138 HRNRVIHRDLKLGNLFLNEDLEVKIGDF 165
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-------VAVKVFHQECARA-LKSFEAQCEVMKSI-R 250
L +G G+FG V A GI+ VAVK+ + + ++ ++ +++ I
Sbjct: 31 LGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 251 HPNLVKVISSCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRL--------NIMID 301
H N+V ++ +C+ +V+ E+ G+L L S ++ L +++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV--- 348
+ + + F + IH DL ++LL E V + DF +Y +G
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 349 --------------STRSDIYGYGIVLMETFT 366
+ +SD++ +G++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 31 LSRNNLSSDMPATIGGLISLKTLSLAYNKLDV-------ASLEILNLSNNEI 75
L+ N L+S P L +L+ LSL N+L V A+LEIL++S N++
Sbjct: 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQL 538
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 50/216 (23%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE-------VAVKVFHQECARA-LKSFEAQCEVMKSI- 249
+L +G G+FG V A GI+ VAVK+ + + ++ ++ +++ I
Sbjct: 32 KLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 90
Query: 250 RHPNLVKVISSCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEY 308
H N+V ++ +C+ +V+ E+ G+L L S ++ ++ D TLE+
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL-TLEH 149
Query: 309 LY-----------FGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------------- 340
L F + IH DL ++LL E V + DF
Sbjct: 150 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 341 ----------EYGMEGQVSTRSDIYGYGIVLMETFT 366
E + + +SD++ +G++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 242 QCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMID 301
+ + +S+ H ++V ++DF +VLE + SL L++ +R + +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----------LELHKRRKALTE 114
Query: 302 --ATSTLEYLYFG----HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
A L + G H +IH DLK ++ L+ED+ + DF
Sbjct: 115 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDF 159
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 26 VVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKLD---------VASLEILNLSNNEI 75
+ E+ L RN L S P L L LSL YN+L + SL+ L L NN++
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 27/157 (17%)
Query: 199 RLSNL--IGMGSFGSVYRA-----RLRDGIEVAVKVFHQEC-ARALKSFEAQCEVMKSIR 250
R +NL IG G++G V A ++R I+ HQ R L+ + +++ R
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR----EIKILLRFR 83
Query: 251 HPNLVKVISSCSNDDFKALVLE-----YMPKGSLENCLYS--STCMLDIFQRLNIMIDAT 303
H N++ + ND +A +E Y+ + +E LY T L +
Sbjct: 84 HENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 304 STLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+Y+ H+ ++H DLKP ++LL+ + DF
Sbjct: 139 RGLKYI---HSANVLHRDLKPSNLLLNTTXDLKICDF 172
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 73 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 128
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEV--MK 247
L+R NL IG G+ G V Y A L VA+K + + A E+ MK
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 248 SIRHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDAT 303
+ H N++ +++ + P+ +LE +Y ++D + Q + + +D
Sbjct: 79 XVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH- 125
Query: 304 STLEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 42/204 (20%)
Query: 204 IGMGSFGSVYRARLR-DGIEVAVK-----VFHQECARALKSFEAQCEVMKSIRHPNLVKV 257
IG G++GSV + + G +AVK V +E + L + VM+S P +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 258 ISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL-YFGHTTP 316
+ + + +E M + Y + + D+ + +T++ L +
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 317 IIHCDLKPISVLLDEDMVAHLSDFEYGMEGQV---------------------------- 348
IIH D+KP ++LLD L DF G+ GQ+
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDF--GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 349 --STRSDIYGYGIVLMETFTRKKP 370
RSD++ GI L E T + P
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFP 228
>pdb|3C3W|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr
pdb|3C3W|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr
Length = 225
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 360 VLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLME 395
+L E T K+ DRMF+ E ++K++V+ LL ME
Sbjct: 160 LLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGME 195
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 239 FEAQCEVMKSIRHPNLVKVISSCSNDDFKALVLEYMPKGSL---ENCLY----SSTCMLD 291
F+ + +++ I++ + +N D ++ EYM S+ + + + TC +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 292 IFQRLNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF---EYGMEGQV 348
I Q + +I + + Y + I H D+KP ++L+D++ LSDF EY ++ ++
Sbjct: 150 I-QVIKCIIKSVLN-SFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 349 STRSDIYGY 357
Y +
Sbjct: 208 KGSRGTYEF 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 58/255 (22%)
Query: 204 IGMGSFGSVYRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSCSN 263
+G G FG V+R + + F + + + ++ RH N++ + S +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 264 DDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLN----------IMIDATSTLEYLYFGH 313
+ ++ E++ LDIF+R+N I+ E L F H
Sbjct: 73 MEELVMIFEFISG-------------LDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 314 TTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQ-------------------------- 347
+ I H D++P +++ + + E+G Q
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 348 VSTRSDIYGYGIVLMETFTRKKP----TDRMFVE-----ELSLKDWVNNLLPISLMEVVD 398
VST +D++ G ++ + P T++ +E E + + + I M+ VD
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239
Query: 399 KTLLSGEKKGFVAKE 413
+ L+ K A E
Sbjct: 240 RLLVKERKSRMTASE 254
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 76
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 77 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 132
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 175
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 296 LNIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L+I I +E+L H+ ++H DLKP ++ D V + DF
Sbjct: 167 LHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDF 208
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D I VA+K + + F+ Q ++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAY--DAILERNVAIK-------KLSRPFQNQTHAKRAY 65
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + L+ + P+ SLE +Y ++D + Q + + +D
Sbjct: 66 RELVLMKCVN---HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH-ER 121
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 196 TLRRLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHP 252
L+R L IG G+ G V A GI VAVK + + F+ Q ++ R
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK-------KLSRPFQNQTHAKRAYREL 72
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATSTLEY 308
L+K ++ + + +L+ + P+ +LE +Y ++D + Q +++ +D + Y
Sbjct: 73 VLLKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH-ERMSY 128
Query: 309 LYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDFEYGMEGQVST 350
L + H+ IIH DLKP ++++ D + DF G+ ST
Sbjct: 129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF--GLARTAST 176
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|1ZLK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain-Dna
Complex
pdb|1ZLK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain-Dna
Complex
pdb|3C57|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain
Crystal Form Ii
pdb|3C57|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Hypoxic Response Regulator Dosr C-Terminal Domain
Crystal Form Ii
Length = 95
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 360 VLMETFTRKKPTDRMFVEELSLKDWVNNLLPISLME 395
+L E T K+ DRMF+ E ++K++V+ LL ME
Sbjct: 38 LLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGME 73
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 196 TLRRLSNL--IGMGSFGSVYRA-RLRDGIEVAVKVFHQECARALKSFEAQCEVMKSIRHP 252
L+R L IG G+ G V A GI VAVK + + F+ Q ++ R
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVK-------KLSRPFQNQTHAKRAYREL 74
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATSTLEY 308
L+K ++ + + +L+ + P+ +LE +Y ++D + Q +++ +D + Y
Sbjct: 75 VLLKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH-ERMSY 130
Query: 309 LYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L + H+ IIH DLKP ++++ D + DF
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIK-------KLSRPFQNQTHAKRAY 64
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 65 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDH-ER 120
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 163
>pdb|1YOV|B Chain B, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
pdb|1YOV|D Chain D, Insights Into The Ubiquitin Transfer Cascade From The
Refined Structure Of The Activating Enzyme For Nedd8
Length = 444
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 134 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 192
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 193 VILPGMTACIECTLELYPPQVN 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 46/212 (21%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-------VAVKVFHQECARA-LKSFEAQCEVMKSI-R 250
L +G G+FG V A GI+ VAVK+ + + ++ ++ +++ I
Sbjct: 31 LGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 251 HPNLVKVISSCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRL--------NIMID 301
H N+V ++ +C+ +V+ E+ G+L L S ++ L +++
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 302 ATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEGQV--- 348
+ + + F + IH DL ++LL E V + DF +Y +G
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 349 --------------STRSDIYGYGIVLMETFT 366
+ +SD++ +G++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
+IG G+FG V ++++ + A+K+ ++ LK E C R V V C
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNK--WEMLKRAETAC-----FREERDVLVNGDC 149
Query: 262 S----------NDDFKALVLEYMPKGSLENCLYSSTCML-DIFQRLNI--MIDATSTLEY 308
+++ LV++Y G L L L + R I M+ A ++
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L++ +H D+KP +VLLD + L+DF
Sbjct: 210 LHY------VHRDIKPDNVLLDVNGHIRLADF 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 203 LIGMGSFGSVYRARLRDGIEV-AVKVFHQECARALKSFEAQCEVMKSIRHPNLVKVISSC 261
+IG G+FG V ++++ + A+K+ ++ LK E C R V V C
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNK--WEMLKRAETAC-----FREERDVLVNGDC 133
Query: 262 S----------NDDFKALVLEYMPKGSLENCLYSSTCML-DIFQRLNI--MIDATSTLEY 308
+++ LV++Y G L L L + R I M+ A ++
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 309 LYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF 340
L++ +H D+KP +VLLD + L+DF
Sbjct: 194 LHY------VHRDIKPDNVLLDVNGHIRLADF 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKXVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 198 RRLSNLIGMGSFGSVYRARLRDGIE---VAVKVFHQECARALKSFEAQCEV--MKSIRHP 252
RR++ L G G++G VY+A D + VA+K E A EV +K ++H
Sbjct: 37 RRITKL-GEGTYGEVYKAI--DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 253 NLVKVISSCSNDDFKALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY-- 310
N++++ S ++ L+ EY EN L + N + +LY
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYA-----ENDLKK-------YMDKNPDVSMRVIKSFLYQL 141
Query: 311 -----FGHTTPIIHCDLKPISVLL 329
F H+ +H DLKP ++LL
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLL 165
>pdb|1R4M|B Chain B, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|D Chain D, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|F Chain F, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4M|H Chain H, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
pdb|1R4N|B Chain B, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|D Chain D, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|F Chain F, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
pdb|1R4N|H Chain H, Appbp1-Uba3-Nedd8, An E1-Ubiquitin-Like Protein Complex
With Atp
Length = 431
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 121 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 179
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 180 VILPGMTACIECTLELYPPQVN 201
>pdb|3DBL|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
pdb|3DBL|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190wt-Nedd8ala72gln)
Length = 434
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 124 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 182
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 183 VILPGMTACIECTLELYPPQVN 204
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 49/215 (22%)
Query: 200 LSNLIGMGSFGSVYRARLRDGIE-------VAVKVFHQECARA-LKSFEAQCEVMKSI-R 250
L +G G+FG V A GI+ VAVK+ + + ++ ++ +++ I
Sbjct: 32 LGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 251 HPNLVKVISSCSNDDFKALVL-EYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYL 309
H N+V ++ +C+ +V+ E+ G+L L S ++ + TLE+L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 310 Y-----------FGHTTPIIHCDLKPISVLLDEDMVAHLSDF------------------ 340
F + IH DL ++LL E V + DF
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 341 ---------EYGMEGQVSTRSDIYGYGIVLMETFT 366
E + + +SD++ +G++L E F+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1TT5|B Chain B, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
pdb|1TT5|D Chain D, Structure Of Appbp1-Uba3-Ubc12n26: A Unique E1-E2
Interaction Required For Optimal Conjugation Of The
Ubiquitin-Like Protein Nedd8
Length = 434
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 124 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 182
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 183 VILPGMTACIECTLELYPPQVN 204
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 253 NLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
N++K+I + + K ALV EY+ + + I +I L+ L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ-------LYQILTDFDIRFYMYELLKALD 146
Query: 311 FGHTTPIIHCDLKPISVLLDE 331
+ H+ I+H D+KP +V++D
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDH 167
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 253 NLVKVISSCSNDDFK--ALVLEYMPKGSLENCLYSSTCMLDIFQRLNIMIDATSTLEYLY 310
N++K+I + + K ALV EY+ + + I +I L+ L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQ-------LYQILTDFDIRFYMYELLKALD 151
Query: 311 FGHTTPIIHCDLKPISVLLDE 331
+ H+ I+H D+KP +V++D
Sbjct: 152 YCHSKGIMHRDVKPHNVMIDH 172
>pdb|3GZN|B Chain B, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
pdb|3GZN|D Chain D, Structure Of Nedd8-Activating Enzyme In Complex With Nedd8
And Mln4924
Length = 463
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 153 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 211
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 212 VILPGMTACIECTLELYPPQVN 233
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 10 NSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSL---AYNKLDVASLE 66
N++EG +G+L+ ++LS N+LSS + G L SLK L+L Y L V SL
Sbjct: 89 NTIEGDAFYSLGSLE---HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL- 144
Query: 67 ILNLSN 72
NL+N
Sbjct: 145 FPNLTN 150
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 5 FDFSSNSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKL---- 60
D S+N + + N+ ++ + LS N L P T GL SL+ LSL N +
Sbjct: 59 IDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 118
Query: 61 -----DVASLEILNLSNNEIY 76
D+++L L + N +Y
Sbjct: 119 EGAFNDLSALSHLAIGANPLY 139
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 19 DIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSLAYNKL---------DVASLEILN 69
++ N K + I+LS N +S+ + + L TL L+YN+L + SL +L+
Sbjct: 49 ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108
Query: 70 LSNNEI 75
L N+I
Sbjct: 109 LHGNDI 114
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 10 NSLEGPLSLDIGNLKAVVEINLSRNNLSSDMPATIGGLISLKTLSL---AYNKLDVASLE 66
N++EG +G+L+ ++LS N+LSS + G L SLK L+L Y L V SL
Sbjct: 63 NTIEGDAFYSLGSLE---HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSL- 118
Query: 67 ILNLSN 72
NL+N
Sbjct: 119 FPNLTN 124
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 73 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 128
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|2NVU|B Chain B, Structure Of Appbp1-Uba3~nedd8-Nedd8-Mgatp-Ubc12(C111a), A
Trapped Ubiquitin-Like Protein Activation Complex
Length = 805
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF +
Sbjct: 495 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 553
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 554 VILPGMTACIECTLELYPPQVN 575
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSV---YRARLRDGIEVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V Y A L VA+K + + F+ Q ++
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIK-------KLSRPFQNQTHAKRAY 71
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 72 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 127
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 72
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 73 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 128
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 70
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 71 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 126
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 127 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 169
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 90/217 (41%), Gaps = 50/217 (23%)
Query: 199 RLSNLIGMGSFGSVYRARLRDGIE-------VAVKVFHQECARA-LKSFEAQCEVMKSI- 249
+L +G G+FG V A GI+ VAVK+ + + ++ ++ +++ I
Sbjct: 67 KLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 125
Query: 250 RHPNLVKVISSCSNDDFKALVL-EYMPKGSLENCLYSSTCML--------DIFQRL---- 296
H N+V ++ +C+ +V+ E+ G+L L S D+++
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 297 NIMIDATSTLEYLYFGHTTPIIHCDLKPISVLLDEDMVAHLSDF----------EYGMEG 346
+++ + + + F + IH DL ++LL E V + DF +Y +G
Sbjct: 186 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 347 QV-----------------STRSDIYGYGIVLMETFT 366
+ +SD++ +G++L E F+
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3DBH|B Chain B, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|D Chain D, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|F Chain F, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
pdb|3DBH|H Chain H, Structural Dissection Of A Gating Mechanism Preventing
Misactivation Of Ubiquitin By Nedd8's E1 (Appbp1-
Uba3arg190ala-Nedd8ala72arg)
Length = 434
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 363 ETFTRKKPTDRMFVEELSLKDWVNNLLPISLMEVVDKTL--------LSGEKKGFVAKEQ 414
+TF R+ ++ + + W+N +L ISL+ D L + G +GF
Sbjct: 124 DTFYRQFHIIVCGLDSIIARRWINGML-ISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAA 182
Query: 415 CVLSILGLAMECAMELPEKRIN 436
+L + +EC +EL ++N
Sbjct: 183 VILPGMTACIECTLELYPPQVN 204
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 65
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 66 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 121
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 64
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 65 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 120
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 163
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 109
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 110 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 165
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 195 ATLRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSI 249
L+R NL IG G+ G V A D + VA+K + + F+ Q ++
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAY 65
Query: 250 RHPNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATST 305
R L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D
Sbjct: 66 RELVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ER 121
Query: 306 LEYLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
+ YL + H+ IIH DLKP ++++ D + DF
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 30/161 (18%)
Query: 197 LRRLSNL--IGMGSFGSVYRARLRDGI---EVAVKVFHQECARALKSFEAQCEVMKSIRH 251
L+R NL IG G+ G V A D + VA+K + + F+ Q ++ R
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIK-------KLSRPFQNQTHAKRAYRE 111
Query: 252 PNLVKVISSCSNDDFKALVLEYMPKGSLENC--LYSSTCMLD--IFQRLNIMIDATSTLE 307
L+K ++ + + +L+ + P+ +LE +Y ++D + Q + + +D +
Sbjct: 112 LVLMKCVN---HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-ERMS 167
Query: 308 YLYFG--------HTTPIIHCDLKPISVLLDEDMVAHLSDF 340
YL + H+ IIH DLKP ++++ D + DF
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,957,225
Number of Sequences: 62578
Number of extensions: 462837
Number of successful extensions: 3288
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 600
Number of HSP's that attempted gapping in prelim test: 1731
Number of HSP's gapped (non-prelim): 1213
length of query: 453
length of database: 14,973,337
effective HSP length: 102
effective length of query: 351
effective length of database: 8,590,381
effective search space: 3015223731
effective search space used: 3015223731
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)