BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036793
MFEITHAMVAAIARAIPSSSIMNMMKKKPAVLYHYPCPDGAFAALAAHLYFSSSSVPALF
FPNTVYNPISPNNLPLHEIDDLYLLDYVGPSGFVQQVSSKVSKVVILDHHKTALEAPIEG
ENVSKTIDMERSGATIAYDYFKNKFLDNGLQLHREFERLSLLFDYIEDGDLWRWRLENSK
AFSSGLKDLNIEFSFQLNPCLFEQLLSLDLESVISQGIVSLSHKQRLIEETLAHSYEIVL
GGEAFGHCLAVDADAVAELRSELGHQLATKSHDLNLRGIGAVVYRVPELQNDQLVKISLR
SVDSEDTTAIAQEFGGGGHRNASSFMLSSAEFERWKVI

High Scoring Gene Products

Symbol, full name Information P value
AT1G53345 protein from Arabidopsis thaliana 9.4e-98
AT5G09580 protein from Arabidopsis thaliana 1.5e-37

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036793
        (338 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006182 - symbol:AT1G53345 "AT1G53345" speci...   971  9.4e-98   1
TAIR|locus:2144786 - symbol:AT5G09580 "AT5G09580" species...   403  1.5e-37   1


>TAIR|locus:505006182 [details] [associations]
            symbol:AT1G53345 "AT1G53345" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP002684 IPI:IPI00533391 RefSeq:NP_564629.1 UniGene:At.37421
            ProteinModelPortal:F4HRG2 PRIDE:F4HRG2 EnsemblPlants:AT1G53345.1
            GeneID:841770 KEGG:ath:AT1G53345 OMA:HAQACGF Uniprot:F4HRG2
        Length = 325

 Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
 Identities = 192/324 (59%), Positives = 240/324 (74%)

Query:    22 MNMMKKKPAVLYHYPCPDGAFAALAAHLYFSSSSVPALFFPNTVYNPISPNNLPLHEIDD 81
             MN+  KK AVLYHYPC DG FAALAAHLYFS+ S+P+LFFPNTVY+PI+ N LPL +I  
Sbjct:     1 MNLGVKKMAVLYHYPCHDGVFAALAAHLYFSAKSIPSLFFPNTVYSPITINQLPLQDISH 60

Query:    82 LYLLDYVGPSGFXXXXXXXXXXXXILDHHKTALEA----PIEGENVSKTIDMERSGATIA 137
             LYL D+ GP GF            ILDHHKTA+++     +  +NV+  +D+ERSGATIA
Sbjct:    61 LYLFDFTGPPGFVHQVSPKVDNVVILDHHKTAIDSLGDVSLTCKNVTSVLDIERSGATIA 120

Query:   138 YDYFKNKFLDNGLQLHRE---FERLSLLFDYIEDGDLWRWRLENSKAFSSGLKDLNIEFS 194
             +DYF  K ++      +E   F+R+  +F+YIED D+W+W L  SKAF+SG+ DL IE+ 
Sbjct:   121 FDYFTQKLVEESRGSCKEMNDFKRMRRVFEYIEDADIWKWELPESKAFNSGILDLKIEYD 180

Query:   195 FQLNPCLFEQLLSLDLESVISQGIVSLSHKQRLIEETLAHSYEIVLGG-EAFGHCLAVDA 253
             F  N  LF+QLLSLD ESVI++G  SLS K +LI E L  SYEIVLGG E FG CLAV+A
Sbjct:   181 FNKNQSLFDQLLSLDHESVINRGKQSLSKKHKLIHEVLEQSYEIVLGGDEEFGRCLAVNA 240

Query:   254 DAVAELRSELGHQLATKSHDLNLRGIGAVVYRVPELQNDQLVKISLRSVDSEDTTAIAQE 313
             D + ELRSELG+QLA KS +L+LRG+GAVVYRVPEL ++  +KISLRSV  EDTT ++Q 
Sbjct:   241 DEITELRSELGNQLAEKSKNLSLRGVGAVVYRVPELGDENKLKISLRSVAEEDTTPVSQR 300

Query:   314 FGGGGHRNASSFMLSSAEFERWKV 337
             FGGGGH+NASSF+L+S EFE+WKV
Sbjct:   301 FGGGGHKNASSFLLNSMEFEQWKV 324


>TAIR|locus:2144786 [details] [associations]
            symbol:AT5G09580 "AT5G09580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 EMBL:AL353994 EMBL:DQ492238
            IPI:IPI00547174 PIR:T49940 RefSeq:NP_196520.1 UniGene:At.54787
            ProteinModelPortal:Q9LXC3 EnsemblPlants:AT5G09580.1 GeneID:830817
            KEGG:ath:AT5G09580 TAIR:At5g09580 InParanoid:Q9LXC3 OMA:SFIIRMD
            PhylomeDB:Q9LXC3 ProtClustDB:CLSN2916883 Genevestigator:Q9LXC3
            Uniprot:Q9LXC3
        Length = 393

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 120/336 (35%), Positives = 171/336 (50%)

Query:    23 NMMKKK-P-AVLYHYPCPDGAFAALAAHLYFSSSSVPALFFPNTVYNPISPNNLPLHEID 80
             N +++K P  VLY+YP   GAF+AL AHLY     +P L  P +   P    +L L   +
Sbjct:    66 NALEEKVPNLVLYNYPSFSGAFSALFAHLYHYRLRLPCLILPFSSLIPFRVEDLCLEGFE 125

Query:    81 DLYLLDYVGPSGFXXXXXXXXXXXXILDHHKTALE--APIEGENVSKT---IDMERSGAT 135
               YLLD+V P  F              DH  +AL+    I+ E+  +    +D E S + 
Sbjct:   126 RCYLLDFVVPKDFACQKTACEIV--CFDHRNSALKRIGLIKEEHKKRLKIYVDTETSSSK 183

Query:   136 IAYDYFKNKFLDNGLQLHREFERLSLL-----------FDYIEDGDLWRWRLENSKAFSS 184
               Y YF +K  D   Q   E E LSLL            DYIED DL RW L + KAFS 
Sbjct:   184 AVYKYFSSKLTD---QRSSEVEALSLLSVEDKTRVESVLDYIEDIDLRRWMLPDIKAFSF 240

Query:   185 GLKDLNIEFSFQLNPCLFEQLLSLDLESVISQGIVSLSHKQRLIEET----LAHSYEIVL 240
             GLKD     +  +NP ++EQLL +    +I+ G    S   RLI+      L  +++I L
Sbjct:   241 GLKDWRSRINCIINPYMYEQLLKISSADLIAYGNSYFS--SRLIDAKKLLKLNKAFKIRL 298

Query:   241 GGEAFGHCLAVDADAVAELRSELGHQLATKSHDLNLRGIGAVVYRVPELQNDQLVKISLR 300
             G   +G CL + AD   +L  ELG  L+ +S    LR IGAV +    +Q + L K+ LR
Sbjct:   299 GRGLYGECLGMRADGNHQLSDELGKLLSLQSSAAGLRPIGAVTF----VQRNNL-KMCLR 353

Query:   301 SVDS-EDTTAIAQEFGGGGHRNASSFMLSSAEFERW 335
             S D+  +T+ +A+ +GGGG  ++SSF++   E+ +W
Sbjct:   354 STDAITNTSEVAKAYGGGGTSSSSSFIIRMDEYNQW 389


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      338       314   0.00081  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  214 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.53u 0.28s 24.81t   Elapsed:  00:00:01
  Total cpu time:  24.53u 0.28s 24.81t   Elapsed:  00:00:01
  Start:  Fri May 10 07:05:01 2013   End:  Fri May 10 07:05:02 2013

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