Query 036794
Match_columns 1152
No_of_seqs 633 out of 4036
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 08:59:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036794.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036794hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1njfa_ c.37.1.20 (A:) delta p 100.0 4.7E-37 3.4E-41 327.4 26.4 236 411-646 2-238 (239)
2 d1sxjb2 c.37.1.20 (B:7-230) Re 100.0 4.1E-32 3E-36 284.8 23.1 219 408-646 2-223 (224)
3 d1sxjc2 c.37.1.20 (C:12-238) R 100.0 1E-31 7.4E-36 281.3 21.5 219 409-647 2-227 (227)
4 d1iqpa2 c.37.1.20 (A:2-232) Re 100.0 3.9E-31 2.8E-35 277.8 20.2 218 407-644 10-229 (231)
5 d1sxjd2 c.37.1.20 (D:26-262) R 100.0 8E-30 5.8E-34 266.9 21.6 219 410-647 1-237 (237)
6 d1a5ta2 c.37.1.20 (A:1-207) de 100.0 8.7E-29 6.3E-33 259.1 19.9 198 425-627 6-206 (207)
7 d1sxje2 c.37.1.20 (E:4-255) Re 100.0 3.5E-28 2.5E-32 256.6 22.1 223 411-633 1-241 (252)
8 d1sxja2 c.37.1.20 (A:295-547) 99.9 6.2E-26 4.5E-30 239.7 19.3 214 409-647 2-248 (253)
9 d1in4a2 c.37.1.20 (A:17-254) H 99.9 6.3E-25 4.6E-29 230.9 24.7 204 414-647 2-233 (238)
10 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 1.3E-23 9.5E-28 221.2 23.9 204 415-647 3-234 (239)
11 d2gnoa2 c.37.1.20 (A:11-208) g 99.9 2.3E-21 1.7E-25 201.6 17.5 184 429-634 2-195 (198)
12 d1ixza_ c.37.1.20 (A:) AAA dom 99.8 2.7E-18 2E-22 184.1 18.2 199 418-645 6-246 (247)
13 d1lv7a_ c.37.1.20 (A:) AAA dom 99.8 4.8E-18 3.5E-22 183.1 19.8 208 417-647 8-251 (256)
14 d1fnna2 c.37.1.20 (A:1-276) CD 99.7 2.2E-16 1.6E-20 165.1 20.6 233 409-647 7-272 (276)
15 d1e32a2 c.37.1.20 (A:201-458) 99.7 2.8E-16 2E-20 168.7 19.6 183 419-630 2-219 (258)
16 d1w5sa2 c.37.1.20 (A:7-293) CD 99.6 3.4E-15 2.5E-19 156.7 20.9 234 408-647 6-286 (287)
17 d1r7ra3 c.37.1.20 (A:471-735) 99.6 2.5E-16 1.8E-20 169.9 10.0 192 417-631 2-226 (265)
18 d1ny5a2 c.37.1.20 (A:138-384) 99.6 5.1E-15 3.7E-19 158.2 18.0 196 422-645 1-247 (247)
19 d1r6bx3 c.37.1.20 (X:437-751) 99.5 2.9E-14 2.1E-18 157.3 16.4 205 408-628 13-274 (315)
20 d1qvra3 c.37.1.20 (A:536-850) 99.5 1.2E-14 8.5E-19 160.7 11.1 212 404-628 10-279 (315)
21 d1l8qa2 c.37.1.20 (A:77-289) C 99.4 5.6E-13 4.1E-17 139.2 16.9 184 419-631 8-212 (213)
22 d1g8pa_ c.37.1.20 (A:) ATPase 99.4 2.2E-12 1.6E-16 142.0 20.2 228 419-651 5-308 (333)
23 d1d2na_ c.37.1.20 (A:) Hexamer 99.4 9.5E-13 6.9E-17 140.3 15.6 183 420-628 8-220 (246)
24 d1ofha_ c.37.1.20 (A:) HslU {H 99.4 4.1E-13 3E-17 147.4 13.1 156 422-593 15-211 (309)
25 d1r6bx2 c.37.1.20 (X:169-436) 99.4 3.4E-12 2.5E-16 137.9 18.7 216 411-647 8-264 (268)
26 d1um8a_ c.37.1.20 (A:) ClpX {H 99.3 2.6E-12 1.9E-16 144.3 15.4 192 422-629 18-331 (364)
27 d1qvra2 c.37.1.20 (A:149-535) 99.2 1.3E-10 9.6E-15 131.3 18.5 202 411-632 12-243 (387)
28 d1jbka_ c.37.1.20 (A:) ClpB, A 99.0 1.9E-10 1.4E-14 118.5 10.0 163 410-592 11-194 (195)
29 d1jr3d1 a.80.1.1 (D:212-338) d 99.0 1.5E-10 1.1E-14 109.7 8.0 108 651-759 1-122 (127)
30 d1w44a_ c.37.1.11 (A:) NTPase 98.9 2.1E-09 1.5E-13 118.4 10.1 126 445-593 125-271 (321)
31 d1svma_ c.37.1.20 (A:) Papillo 98.8 2.6E-09 1.9E-13 119.6 9.3 173 423-628 133-332 (362)
32 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.8 3.7E-08 2.7E-12 101.6 17.1 195 419-629 10-252 (283)
33 d1jr3a1 a.80.1.1 (A:243-368) g 98.7 1.6E-08 1.2E-12 96.1 10.6 110 648-758 2-115 (126)
34 d1g41a_ c.37.1.20 (A:) HslU {H 98.6 2.9E-07 2.1E-11 105.2 17.6 123 526-648 251-432 (443)
35 d2a5yb3 c.37.1.20 (B:109-385) 98.0 3.5E-05 2.5E-09 82.0 16.6 171 422-622 21-225 (277)
36 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 1.8E-05 1.3E-09 76.8 9.8 63 523-587 98-167 (178)
37 d1gvnb_ c.37.1.21 (B:) Plasmid 97.8 5.9E-06 4.3E-10 85.4 4.4 52 419-470 5-59 (273)
38 d1jqlb_ c.37.1.20 (B:) delta s 97.8 0.00011 7.8E-09 70.3 12.8 125 432-580 8-139 (140)
39 d1tuea_ c.37.1.20 (A:) Replica 97.6 9.7E-05 7.1E-09 75.6 10.0 120 428-583 38-174 (205)
40 d1u0ja_ c.37.1.20 (A:) Rep 40 97.2 0.0014 1E-07 69.5 13.6 117 429-583 89-230 (267)
41 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.1 0.00087 6.4E-08 63.7 10.5 26 445-470 3-28 (189)
42 d1w36d1 c.37.1.19 (D:2-360) Ex 97.1 0.00081 5.9E-08 74.2 10.8 42 524-569 261-302 (359)
43 d1j8yf2 c.37.1.10 (F:87-297) G 97.0 0.0012 8.5E-08 67.9 10.5 143 441-602 10-182 (211)
44 d1yksa1 c.37.1.14 (A:185-324) 96.8 0.00061 4.4E-08 62.5 6.0 47 515-562 89-137 (140)
45 d1x6va3 c.37.1.4 (A:34-228) Ad 96.8 0.00045 3.3E-08 67.3 5.3 41 431-471 4-47 (195)
46 d1kaga_ c.37.1.2 (A:) Shikimat 96.7 0.00033 2.4E-08 65.3 3.2 26 445-470 4-29 (169)
47 d1knqa_ c.37.1.17 (A:) Glucona 96.7 0.00047 3.5E-08 65.8 4.2 31 440-470 3-33 (171)
48 d1lw7a2 c.37.1.1 (A:220-411) T 96.7 0.00044 3.2E-08 65.9 3.8 29 443-471 7-35 (192)
49 d1yj5a2 c.37.1.1 (A:351-522) 5 96.7 0.0011 8E-08 65.3 6.9 87 442-560 13-99 (172)
50 d1sxjd1 a.80.1.1 (D:263-353) R 96.7 0.0046 3.4E-07 54.8 10.3 88 649-758 2-89 (91)
51 d1ly1a_ c.37.1.1 (A:) Polynucl 96.6 0.0023 1.7E-07 59.9 8.7 24 444-467 3-26 (152)
52 d1a1va1 c.37.1.14 (A:190-325) 96.6 0.002 1.4E-07 60.1 8.2 39 523-561 93-133 (136)
53 d1m8pa3 c.37.1.15 (A:391-573) 96.6 0.00054 4E-08 65.2 4.1 29 442-470 5-33 (183)
54 d1iqpa1 a.80.1.1 (A:233-327) R 96.6 0.0048 3.5E-07 55.2 10.0 87 649-758 3-90 (95)
55 d2qy9a2 c.37.1.10 (A:285-495) 96.6 0.0039 2.8E-07 63.9 10.4 29 440-468 6-34 (211)
56 d1okkd2 c.37.1.10 (D:97-303) G 96.5 0.0063 4.6E-07 62.1 11.5 26 443-468 6-31 (207)
57 d1rkba_ c.37.1.1 (A:) Adenylat 96.5 0.00062 4.5E-08 64.7 3.5 26 445-470 6-31 (173)
58 d1vmaa2 c.37.1.10 (A:82-294) G 96.5 0.0039 2.8E-07 64.0 9.6 28 441-468 9-36 (213)
59 d1ls1a2 c.37.1.10 (A:89-295) G 96.4 0.0058 4.3E-07 62.3 10.4 27 443-469 10-36 (207)
60 d2bdta1 c.37.1.25 (A:1-176) Hy 96.3 0.00085 6.2E-08 63.3 3.4 26 444-469 3-28 (176)
61 d1qhxa_ c.37.1.3 (A:) Chloramp 96.1 0.0014 1E-07 62.2 3.5 27 444-470 4-30 (178)
62 d1y63a_ c.37.1.1 (A:) Probable 95.8 0.002 1.4E-07 61.4 3.4 25 444-468 6-30 (174)
63 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.7 0.0016 1.1E-07 62.1 2.1 28 443-470 4-31 (176)
64 d1sxjc1 a.80.1.1 (C:239-333) R 95.7 0.043 3.1E-06 48.7 11.7 87 650-758 3-90 (95)
65 d2iyva1 c.37.1.2 (A:2-166) Shi 95.6 0.0025 1.8E-07 61.5 3.1 25 446-470 4-28 (165)
66 d1e6ca_ c.37.1.2 (A:) Shikimat 95.6 0.0029 2.1E-07 61.3 3.5 26 445-470 4-29 (170)
67 d1viaa_ c.37.1.2 (A:) Shikimat 95.4 0.0033 2.4E-07 60.6 3.2 25 446-470 3-27 (161)
68 d1np6a_ c.37.1.10 (A:) Molybdo 95.3 0.0045 3.3E-07 58.4 3.7 27 444-470 3-29 (170)
69 d1qf9a_ c.37.1.1 (A:) UMP/CMP 95.3 0.0044 3.2E-07 60.8 3.7 29 442-470 5-33 (194)
70 d1ckea_ c.37.1.1 (A:) CMP kina 95.1 0.0057 4.2E-07 60.4 4.0 29 442-470 2-30 (225)
71 d1wb9a2 c.37.1.12 (A:567-800) 95.1 0.049 3.6E-06 56.1 11.2 110 444-565 42-165 (234)
72 d1wp9a1 c.37.1.19 (A:1-200) pu 95.0 0.017 1.2E-06 56.5 7.2 21 446-466 26-46 (200)
73 d1khta_ c.37.1.1 (A:) Adenylat 95.0 0.0078 5.7E-07 57.1 4.5 27 444-470 2-28 (190)
74 d1bifa1 c.37.1.7 (A:37-249) 6- 94.9 0.0065 4.7E-07 59.5 3.7 28 443-470 2-29 (213)
75 d1zina1 c.37.1.1 (A:1-125,A:16 94.9 0.0065 4.7E-07 58.6 3.7 25 446-470 3-27 (182)
76 d1ukza_ c.37.1.1 (A:) Uridylat 94.9 0.0061 4.4E-07 60.0 3.4 27 444-470 9-35 (196)
77 d2cdna1 c.37.1.1 (A:1-181) Ade 94.9 0.0067 4.9E-07 58.9 3.6 25 446-470 3-27 (181)
78 d1teva_ c.37.1.1 (A:) UMP/CMP 94.9 0.0071 5.2E-07 59.2 3.8 28 443-470 1-28 (194)
79 d1zaka1 c.37.1.1 (A:3-127,A:15 94.7 0.0068 5E-07 59.4 3.2 27 445-471 5-31 (189)
80 d3b60a1 c.37.1.12 (A:329-581) 94.7 0.0044 3.2E-07 65.0 1.8 42 524-565 170-212 (253)
81 d2gj8a1 c.37.1.8 (A:216-376) P 94.7 0.026 1.9E-06 53.0 7.2 43 523-565 81-123 (161)
82 d1tf7a2 c.37.1.11 (A:256-497) 94.6 0.027 2E-06 56.5 7.5 26 443-468 26-51 (242)
83 d1g6oa_ c.37.1.11 (A:) Hexamer 94.4 0.072 5.2E-06 57.3 10.9 108 426-551 152-259 (323)
84 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.4 0.01 7.4E-07 58.0 3.6 25 446-470 6-30 (190)
85 d2fz4a1 c.37.1.19 (A:24-229) D 94.3 0.054 3.9E-06 54.0 9.0 23 446-468 88-110 (206)
86 d3adka_ c.37.1.1 (A:) Adenylat 94.3 0.011 7.9E-07 58.2 3.5 28 443-470 8-35 (194)
87 d1s3ga1 c.37.1.1 (A:1-125,A:16 94.3 0.012 8.4E-07 57.3 3.7 25 446-470 3-27 (182)
88 d1mv5a_ c.37.1.12 (A:) Multidr 94.2 0.012 9E-07 61.1 4.0 25 444-468 29-53 (242)
89 d1akya1 c.37.1.1 (A:3-130,A:16 94.2 0.012 8.6E-07 57.3 3.5 25 446-470 5-29 (180)
90 d1ewqa2 c.37.1.12 (A:542-765) 94.2 0.046 3.3E-06 56.0 8.2 106 445-564 37-157 (224)
91 d2p67a1 c.37.1.10 (A:1-327) LA 94.1 1.8 0.00013 46.1 21.4 31 440-470 51-81 (327)
92 d1rz3a_ c.37.1.6 (A:) Hypothet 94.1 0.029 2.1E-06 53.8 6.2 42 429-470 6-49 (198)
93 d1nksa_ c.37.1.1 (A:) Adenylat 94.1 0.013 9.2E-07 55.9 3.4 26 445-470 3-28 (194)
94 d1e4va1 c.37.1.1 (A:1-121,A:15 93.9 0.014 1E-06 56.4 3.5 25 446-470 3-27 (179)
95 d1m7ga_ c.37.1.4 (A:) Adenosin 93.9 0.014 1E-06 59.0 3.5 31 438-468 19-49 (208)
96 d1r8sa_ c.37.1.8 (A:) ADP-ribo 93.9 0.31 2.3E-05 44.5 12.9 21 446-466 3-23 (160)
97 d2p6ra3 c.37.1.19 (A:1-202) He 93.8 0.025 1.8E-06 56.0 5.1 41 523-563 137-181 (202)
98 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.8 0.29 2.1E-05 46.7 12.8 21 445-465 7-27 (178)
99 d2ak3a1 c.37.1.1 (A:0-124,A:16 93.7 0.014 1.1E-06 57.7 3.1 25 446-470 9-33 (189)
100 d2pmka1 c.37.1.12 (A:467-707) 93.6 0.013 9.7E-07 60.9 2.9 43 524-566 157-200 (241)
101 d1v5wa_ c.37.1.11 (A:) Meiotic 93.6 0.099 7.2E-06 51.9 9.4 25 444-468 38-62 (258)
102 d1u94a1 c.37.1.11 (A:6-268) Re 93.5 0.024 1.8E-06 59.5 4.7 85 443-537 54-145 (263)
103 d1htwa_ c.37.1.18 (A:) Hypothe 93.4 0.056 4.1E-06 52.7 6.9 52 420-471 4-61 (158)
104 d1jj7a_ c.37.1.12 (A:) Peptide 93.4 0.02 1.4E-06 59.8 3.7 42 524-565 169-213 (251)
105 d1z0fa1 c.37.1.8 (A:8-173) Rab 93.4 0.23 1.7E-05 46.8 11.2 21 446-466 7-27 (166)
106 d1q3ta_ c.37.1.1 (A:) CMP kina 93.3 0.021 1.6E-06 56.5 3.7 25 446-470 6-30 (223)
107 d1xp8a1 c.37.1.11 (A:15-282) R 93.2 0.27 2E-05 51.4 12.3 87 441-537 55-148 (268)
108 d2hyda1 c.37.1.12 (A:324-578) 93.2 0.01 7.5E-07 62.3 1.0 43 524-566 172-215 (255)
109 d1s2ma1 c.37.1.19 (A:46-251) P 93.1 0.26 1.9E-05 48.7 11.5 41 523-563 142-183 (206)
110 d1mkya1 c.37.1.8 (A:2-172) Pro 93.0 0.2 1.5E-05 47.4 10.1 21 445-465 2-22 (171)
111 d2bmfa2 c.37.1.14 (A:178-482) 92.4 0.14 1E-05 52.7 8.6 22 519-540 95-116 (305)
112 d1n0wa_ c.37.1.11 (A:) DNA rep 92.4 0.039 2.9E-06 52.5 4.0 27 442-468 22-48 (242)
113 d1sxjb1 a.80.1.1 (B:231-322) R 92.3 0.22 1.6E-05 43.7 8.6 78 660-759 10-88 (92)
114 d1ksha_ c.37.1.8 (A:) ADP-ribo 92.2 0.24 1.8E-05 46.3 9.5 20 446-465 5-24 (165)
115 d2eyqa3 c.37.1.19 (A:546-778) 92.1 0.82 6E-05 46.7 14.0 46 420-466 54-99 (233)
116 d1nlfa_ c.37.1.11 (A:) Hexamer 92.1 0.43 3.2E-05 48.3 12.0 25 444-468 30-54 (274)
117 d2ew1a1 c.37.1.8 (A:4-174) Rab 92.1 0.15 1.1E-05 48.4 7.8 21 446-466 8-28 (171)
118 d2g9na1 c.37.1.19 (A:21-238) I 92.1 0.095 6.9E-06 53.0 6.6 56 507-564 140-196 (218)
119 d1ky3a_ c.37.1.8 (A:) Rab-rela 92.0 0.078 5.7E-06 50.4 5.6 20 446-465 5-24 (175)
120 d1r2qa_ c.37.1.8 (A:) Rab5a {H 92.0 0.12 8.6E-06 49.2 6.9 21 446-466 9-29 (170)
121 d2qm8a1 c.37.1.10 (A:5-327) Me 91.8 2.5 0.00019 44.8 18.2 31 439-469 47-77 (323)
122 d1qdea_ c.37.1.19 (A:) Initiat 91.7 0.12 8.9E-06 51.9 7.0 41 523-563 150-191 (212)
123 d2fh5b1 c.37.1.8 (B:63-269) Si 91.7 0.22 1.6E-05 48.7 8.8 22 445-466 2-23 (207)
124 d1mo6a1 c.37.1.11 (A:1-269) Re 91.7 0.25 1.8E-05 51.8 9.6 85 443-537 60-151 (269)
125 d1pzna2 c.37.1.11 (A:96-349) D 91.6 0.043 3.1E-06 54.8 3.4 26 443-468 36-61 (254)
126 d1r0wa_ c.37.1.12 (A:) Cystic 91.6 0.24 1.8E-05 52.1 9.5 25 444-468 63-87 (281)
127 d1kaoa_ c.37.1.8 (A:) Rap2a {H 91.5 0.72 5.2E-05 43.2 12.0 21 446-466 6-26 (167)
128 d2a5ja1 c.37.1.8 (A:9-181) Rab 91.5 0.079 5.7E-06 50.7 5.1 20 446-465 6-25 (173)
129 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.4 0.062 4.5E-06 50.9 4.1 20 446-465 5-24 (164)
130 d1szpa2 c.37.1.11 (A:145-395) 91.3 0.039 2.9E-06 54.5 2.7 23 444-466 35-57 (251)
131 d2f9la1 c.37.1.8 (A:8-182) Rab 91.1 0.28 2.1E-05 46.7 8.6 20 446-465 7-26 (175)
132 d1hv8a1 c.37.1.19 (A:3-210) Pu 91.0 0.53 3.9E-05 46.6 11.0 41 523-563 144-185 (208)
133 d3raba_ c.37.1.8 (A:) Rab3a {R 91.0 0.11 7.8E-06 49.5 5.5 21 446-466 8-28 (169)
134 d2bcgy1 c.37.1.8 (Y:3-196) GTP 90.8 0.23 1.7E-05 48.3 7.8 20 446-465 9-28 (194)
135 d2atva1 c.37.1.8 (A:5-172) Ras 90.8 0.32 2.3E-05 46.0 8.7 20 446-465 5-24 (168)
136 d1znwa1 c.37.1.1 (A:20-201) Gu 90.8 0.072 5.3E-06 51.5 3.9 25 443-467 2-26 (182)
137 d1yzqa1 c.37.1.8 (A:14-177) Ra 90.6 0.42 3E-05 44.7 9.2 20 446-465 3-22 (164)
138 d1zj6a1 c.37.1.8 (A:2-178) ADP 90.5 0.42 3E-05 44.8 9.2 22 444-465 16-37 (177)
139 d1q0ua_ c.37.1.19 (A:) Probabl 90.4 0.089 6.5E-06 51.9 4.4 41 523-563 146-187 (209)
140 d1cr2a_ c.37.1.11 (A:) Gene 4 90.3 0.37 2.7E-05 49.1 9.2 27 441-467 33-59 (277)
141 d1u8za_ c.37.1.8 (A:) Ras-rela 90.3 0.4 2.9E-05 45.4 8.9 20 446-465 7-26 (168)
142 d1ctqa_ c.37.1.8 (A:) cH-p21 R 90.3 0.33 2.4E-05 45.7 8.2 20 446-465 6-25 (166)
143 d1gm5a3 c.37.1.19 (A:286-549) 90.2 0.38 2.7E-05 50.3 9.3 46 420-466 82-127 (264)
144 d2bmea1 c.37.1.8 (A:6-179) Rab 90.0 0.44 3.2E-05 45.1 8.9 20 446-465 8-27 (174)
145 d1xjca_ c.37.1.10 (A:) Molybdo 90.0 0.088 6.4E-06 50.0 3.7 26 445-470 3-28 (165)
146 d2erxa1 c.37.1.8 (A:6-176) di- 89.9 0.28 2.1E-05 46.2 7.4 20 446-465 5-24 (171)
147 d2gjsa1 c.37.1.8 (A:91-258) Ra 89.9 0.47 3.4E-05 44.8 9.0 20 446-465 4-23 (168)
148 d1uj2a_ c.37.1.6 (A:) Uridine- 89.9 0.086 6.2E-06 52.1 3.7 27 444-470 3-29 (213)
149 d1veca_ c.37.1.19 (A:) DEAD bo 89.7 0.73 5.3E-05 45.6 10.7 41 522-562 144-185 (206)
150 d2fn4a1 c.37.1.8 (A:24-196) r- 89.7 0.18 1.3E-05 48.1 5.8 20 446-465 9-28 (173)
151 d2i1qa2 c.37.1.11 (A:65-322) D 89.7 0.086 6.3E-06 51.7 3.5 26 443-468 34-59 (258)
152 d1lvga_ c.37.1.1 (A:) Guanylat 89.7 0.085 6.2E-06 51.8 3.5 23 446-468 3-25 (190)
153 d1gkya_ c.37.1.1 (A:) Guanylat 89.5 0.085 6.2E-06 51.5 3.3 23 446-468 4-26 (186)
154 d1c1ya_ c.37.1.8 (A:) Rap1A {H 89.4 0.26 1.9E-05 46.5 6.6 21 446-466 6-26 (167)
155 d1x1ra1 c.37.1.8 (A:10-178) Ra 89.4 0.53 3.8E-05 44.6 8.9 20 446-465 7-26 (169)
156 d2b8ta1 c.37.1.24 (A:11-149) T 89.2 0.34 2.5E-05 45.8 7.2 106 445-561 4-113 (139)
157 d2g6ba1 c.37.1.8 (A:58-227) Ra 88.8 0.23 1.7E-05 47.0 5.8 20 446-465 9-28 (170)
158 d1p9ra_ c.37.1.11 (A:) Extrace 88.7 0.17 1.2E-05 55.8 5.3 51 418-470 135-185 (401)
159 d1z0ja1 c.37.1.8 (A:2-168) Rab 88.5 1 7.3E-05 42.2 10.2 20 446-465 7-26 (167)
160 d1nrjb_ c.37.1.8 (B:) Signal r 88.1 0.75 5.4E-05 44.2 9.2 23 444-466 4-26 (209)
161 d1z06a1 c.37.1.8 (A:32-196) Ra 87.8 0.26 1.9E-05 46.1 5.4 21 446-466 5-25 (165)
162 d1x3sa1 c.37.1.8 (A:2-178) Rab 87.5 0.76 5.5E-05 43.6 8.7 20 446-465 10-29 (177)
163 d1tf7a1 c.37.1.11 (A:14-255) C 87.5 0.16 1.2E-05 49.5 3.9 24 442-465 25-48 (242)
164 d1h65a_ c.37.1.8 (A:) Chloropl 87.4 0.97 7E-05 46.2 10.0 25 441-465 30-54 (257)
165 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.1 0.24 1.7E-05 47.1 4.7 20 446-465 9-28 (174)
166 d2j0sa1 c.37.1.19 (A:22-243) P 87.1 0.66 4.8E-05 46.7 8.3 41 523-563 158-199 (222)
167 d1egaa1 c.37.1.8 (A:4-182) GTP 87.1 2.4 0.00018 39.4 12.0 21 445-465 7-27 (179)
168 d2erya1 c.37.1.8 (A:10-180) r- 86.9 0.62 4.5E-05 43.9 7.6 20 446-465 8-27 (171)
169 d1zd9a1 c.37.1.8 (A:18-181) AD 86.6 1 7.6E-05 41.9 9.0 20 446-465 5-24 (164)
170 d1svia_ c.37.1.8 (A:) Probable 86.6 1.3 9.8E-05 42.3 10.1 21 445-465 25-45 (195)
171 d2atxa1 c.37.1.8 (A:9-193) Rho 86.4 0.33 2.4E-05 46.7 5.4 21 446-466 12-32 (185)
172 d1t6na_ c.37.1.19 (A:) Spliceo 86.2 0.55 4E-05 46.5 7.1 39 523-561 144-184 (207)
173 d1fzqa_ c.37.1.8 (A:) ADP-ribo 86.1 1 7.5E-05 42.2 8.7 20 445-464 18-37 (176)
174 d2vp4a1 c.37.1.1 (A:12-208) De 85.9 0.12 9.1E-06 49.9 1.9 29 441-469 7-35 (197)
175 d1kgda_ c.37.1.1 (A:) Guanylat 85.4 0.27 1.9E-05 47.9 4.1 24 444-467 4-27 (178)
176 d1s96a_ c.37.1.1 (A:) Guanylat 85.4 0.24 1.7E-05 49.5 3.7 24 444-467 3-26 (205)
177 d1g16a_ c.37.1.8 (A:) Rab-rela 85.3 0.56 4.1E-05 43.9 6.3 21 446-466 5-25 (166)
178 d1yrba1 c.37.1.10 (A:1-244) AT 85.0 0.25 1.8E-05 48.8 3.7 24 445-468 2-25 (244)
179 d2g3ya1 c.37.1.8 (A:73-244) GT 84.8 0.77 5.6E-05 43.5 7.1 19 446-464 6-24 (172)
180 d1z08a1 c.37.1.8 (A:17-183) Ra 84.6 0.31 2.2E-05 46.0 4.0 20 446-465 6-25 (167)
181 d1nn5a_ c.37.1.1 (A:) Thymidyl 84.5 0.28 2E-05 48.9 3.8 27 444-470 4-30 (209)
182 d1kkma_ c.91.1.2 (A:) HPr kina 83.9 0.28 2.1E-05 48.3 3.5 24 443-466 14-37 (176)
183 d1odfa_ c.37.1.6 (A:) Hypothet 83.0 0.69 5E-05 48.7 6.3 26 443-468 27-52 (286)
184 d1rifa_ c.37.1.23 (A:) DNA hel 82.9 1.6 0.00012 45.2 9.2 40 424-467 113-152 (282)
185 d1i2ma_ c.37.1.8 (A:) Ran {Hum 82.8 0.39 2.9E-05 45.5 3.9 20 446-465 6-25 (170)
186 d1uaaa1 c.37.1.19 (A:2-307) DE 82.8 0.28 2.1E-05 50.1 3.1 23 445-467 16-39 (306)
187 d1sq5a_ c.37.1.6 (A:) Pantothe 82.2 0.4 2.9E-05 51.1 4.1 30 440-469 77-106 (308)
188 d4tmka_ c.37.1.1 (A:) Thymidyl 81.8 0.41 3E-05 47.0 3.7 26 445-470 4-29 (210)
189 d1p6xa_ c.37.1.1 (A:) Thymidin 81.6 2.1 0.00015 45.8 9.7 24 446-469 9-32 (333)
190 d2qtvb1 c.37.1.8 (B:24-189) SA 81.5 0.38 2.8E-05 43.7 3.2 21 446-466 3-23 (166)
191 d1moza_ c.37.1.8 (A:) ADP-ribo 81.5 1.2 8.9E-05 42.1 7.0 20 445-464 19-38 (182)
192 d2ocpa1 c.37.1.1 (A:37-277) De 81.5 0.37 2.7E-05 47.9 3.3 28 443-470 2-29 (241)
193 d2fu5c1 c.37.1.8 (C:3-175) Rab 81.2 0.27 2E-05 46.7 2.0 20 446-465 9-28 (173)
194 d1upta_ c.37.1.8 (A:) ADP-ribo 81.1 0.4 2.9E-05 44.0 3.2 20 446-465 8-27 (169)
195 d1knxa2 c.91.1.2 (A:133-309) H 81.1 0.35 2.5E-05 47.7 2.8 23 444-466 16-38 (177)
196 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 81.0 0.47 3.5E-05 44.2 3.7 26 440-465 10-35 (186)
197 d1xzpa2 c.37.1.8 (A:212-371) T 80.9 11 0.00078 34.0 13.5 21 446-466 3-23 (160)
198 d1gsia_ c.37.1.1 (A:) Thymidyl 80.9 0.46 3.4E-05 46.0 3.7 25 446-470 3-27 (208)
199 d1g5ta_ c.37.1.11 (A:) ATP:cor 80.8 2.8 0.0002 40.2 9.3 63 511-576 81-146 (157)
200 d1uf9a_ c.37.1.1 (A:) Dephosph 80.6 0.46 3.4E-05 45.7 3.6 25 443-468 3-27 (191)
201 d1ko7a2 c.91.1.2 (A:130-298) H 80.3 0.44 3.2E-05 46.6 3.2 23 444-466 16-38 (169)
202 d1pjra1 c.37.1.19 (A:1-318) DE 80.1 0.61 4.4E-05 48.1 4.5 23 445-467 26-49 (318)
203 d1m7ba_ c.37.1.8 (A:) RhoE (RN 79.9 0.93 6.8E-05 43.3 5.5 21 446-466 5-25 (179)
204 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 79.7 1.3 9.8E-05 41.3 6.6 21 446-466 6-26 (170)
205 d1e2ka_ c.37.1.1 (A:) Thymidin 79.3 2.3 0.00016 45.5 8.9 23 446-468 7-29 (329)
206 d1tq4a_ c.37.1.8 (A:) Interfer 77.6 3.5 0.00026 44.7 10.1 115 443-566 56-174 (400)
207 g1f2t.1 c.37.1.12 (A:,B:) Rad5 77.5 0.68 5E-05 46.4 3.9 25 445-469 25-49 (292)
208 d1oywa2 c.37.1.19 (A:1-206) Re 76.9 0.8 5.8E-05 44.5 4.0 32 426-464 30-61 (206)
209 d1mkya2 c.37.1.8 (A:173-358) P 76.7 4.1 0.0003 38.1 9.2 21 445-465 10-30 (186)
210 d1p5zb_ c.37.1.1 (B:) Deoxycyt 75.9 0.28 2.1E-05 48.5 0.3 25 445-469 4-28 (241)
211 d1tmka_ c.37.1.1 (A:) Thymidyl 75.5 0.77 5.6E-05 45.6 3.5 26 444-469 4-29 (214)
212 d1n0ua2 c.37.1.8 (A:3-343) Elo 75.5 12 0.00089 39.7 13.5 147 432-597 6-181 (341)
213 d2f7sa1 c.37.1.8 (A:5-190) Rab 75.3 0.68 5E-05 44.1 3.0 19 446-464 8-26 (186)
214 d1sgwa_ c.37.1.12 (A:) Putativ 75.3 0.57 4.2E-05 46.5 2.5 23 445-467 29-51 (200)
215 d1xpua3 c.37.1.11 (A:129-417) 74.4 2.4 0.00017 44.5 7.2 26 445-470 45-70 (289)
216 d3d31a2 c.37.1.12 (A:1-229) Su 74.3 0.86 6.3E-05 46.5 3.6 43 523-565 144-189 (229)
217 d1l2ta_ c.37.1.12 (A:) MJ0796 73.9 0.8 5.8E-05 46.7 3.2 42 524-565 163-207 (230)
218 d1u0la2 c.37.1.8 (A:69-293) Pr 73.4 1.1 8E-05 45.6 4.1 33 429-465 85-117 (225)
219 d2awna2 c.37.1.12 (A:4-235) Ma 72.9 1 7.4E-05 46.0 3.7 24 444-467 27-50 (232)
220 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 72.9 0.9 6.6E-05 43.2 3.1 20 446-465 5-24 (184)
221 d1oxxk2 c.37.1.12 (K:1-242) Gl 72.5 0.89 6.5E-05 46.8 3.1 24 444-467 32-55 (242)
222 d1vhta_ c.37.1.1 (A:) Dephosph 72.4 0.98 7.1E-05 44.4 3.4 24 445-469 5-28 (208)
223 d2onka1 c.37.1.12 (A:1-240) Mo 72.0 0.95 6.9E-05 46.5 3.2 23 445-467 26-48 (240)
224 d1xtqa1 c.37.1.8 (A:3-169) GTP 71.7 0.96 7E-05 42.2 3.0 20 446-465 7-26 (167)
225 d2bmja1 c.37.1.8 (A:66-240) Ce 71.6 8.1 0.00059 36.4 9.9 21 446-466 8-28 (175)
226 d1byia_ c.37.1.10 (A:) Dethiob 71.4 1.1 7.7E-05 43.1 3.3 26 445-470 3-29 (224)
227 d1g2912 c.37.1.12 (1:1-240) Ma 71.2 1 7.4E-05 46.2 3.2 42 524-565 157-201 (240)
228 d3dhwc1 c.37.1.12 (C:1-240) Me 71.2 0.94 6.8E-05 46.5 2.9 24 444-467 32-55 (240)
229 d1qhla_ c.37.1.12 (A:) Cell di 71.1 0.45 3.2E-05 44.4 0.4 25 446-470 27-51 (222)
230 d1deka_ c.37.1.1 (A:) Deoxynuc 71.1 1.1 7.8E-05 44.6 3.3 25 445-469 3-27 (241)
231 d1sxje1 a.80.1.1 (E:256-354) R 70.8 11 0.00079 33.4 9.6 67 669-757 28-94 (99)
232 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 70.7 1 7.5E-05 42.5 3.0 21 446-466 5-25 (177)
233 d1lkxa_ c.37.1.9 (A:) Myosin S 70.5 2.5 0.00018 49.3 6.9 34 436-469 79-112 (684)
234 d1v43a3 c.37.1.12 (A:7-245) Hy 70.0 1.3 9.3E-05 45.4 3.7 25 444-468 33-57 (239)
235 d2cxxa1 c.37.1.8 (A:2-185) GTP 69.8 1.1 8.1E-05 42.1 3.0 21 445-465 2-22 (184)
236 d1e0sa_ c.37.1.8 (A:) ADP-ribo 69.7 0.78 5.7E-05 43.3 1.8 20 445-464 14-33 (173)
237 g1ii8.1 c.37.1.12 (A:,B:) Rad5 69.0 1.4 0.0001 44.2 3.8 24 445-468 25-48 (369)
238 d1ihua1 c.37.1.10 (A:1-296) Ar 68.4 1.7 0.00012 44.0 4.2 28 441-468 6-33 (296)
239 d1a7ja_ c.37.1.6 (A:) Phosphor 68.2 0.88 6.4E-05 47.9 2.0 28 443-470 4-31 (288)
240 d2dy1a2 c.37.1.8 (A:8-274) Elo 67.8 14 0.0011 37.7 11.5 99 445-550 4-118 (267)
241 d1nija1 c.37.1.10 (A:2-223) Hy 67.8 1.1 7.7E-05 45.0 2.4 23 444-466 4-26 (222)
242 d1jjva_ c.37.1.1 (A:) Dephosph 67.6 1.2 9E-05 43.5 2.9 23 446-469 5-27 (205)
243 d2c78a3 c.37.1.8 (A:9-212) Elo 67.2 34 0.0025 32.9 13.8 114 445-566 5-132 (204)
244 d1mh1a_ c.37.1.8 (A:) Rac {Hum 67.1 1.4 0.0001 41.8 3.2 21 446-466 8-28 (183)
245 d1d0xa2 c.37.1.9 (A:2-33,A:80- 66.5 3.3 0.00024 48.5 6.8 34 435-469 118-151 (712)
246 d1b0ua_ c.37.1.12 (A:) ATP-bin 65.8 1.5 0.00011 45.3 3.2 23 444-466 29-51 (258)
247 d2ngra_ c.37.1.8 (A:) CDC42 {H 65.5 1.5 0.00011 42.0 3.0 20 446-465 6-25 (191)
248 d2jdia3 c.37.1.11 (A:95-379) C 65.0 8.4 0.00061 40.0 9.0 99 446-560 71-175 (285)
249 d2mysa2 c.37.1.9 (A:4-33,A:80- 64.5 3.9 0.00028 48.5 6.9 31 439-469 119-149 (794)
250 d2bv3a2 c.37.1.8 (A:7-282) Elo 63.3 21 0.0015 36.7 11.7 121 445-576 8-152 (276)
251 g1xew.1 c.37.1.12 (X:,Y:) Smc 63.2 1.6 0.00012 44.9 2.9 25 445-469 28-52 (329)
252 d1br2a2 c.37.1.9 (A:80-789) My 62.7 4.4 0.00032 47.3 6.9 33 436-468 84-116 (710)
253 d1ji0a_ c.37.1.12 (A:) Branche 62.3 1.7 0.00012 44.4 2.7 53 523-576 156-210 (240)
254 d1kk8a2 c.37.1.9 (A:1-28,A:77- 62.3 3.8 0.00028 48.5 6.3 37 432-469 111-147 (789)
255 d1zcba2 c.37.1.8 (A:47-75,A:20 61.7 1.9 0.00014 40.9 2.8 18 446-463 5-22 (200)
256 d1w7ja2 c.37.1.9 (A:63-792) My 60.8 4.9 0.00036 47.0 6.8 35 434-469 86-120 (730)
257 d1vpla_ c.37.1.12 (A:) Putativ 60.0 2.2 0.00016 43.4 3.2 43 523-565 150-194 (238)
258 d1g6ha_ c.37.1.12 (A:) MJ1267 58.4 2.1 0.00016 43.8 2.7 51 524-575 168-220 (254)
259 d3ctda1 a.80.1.2 (A:258-420) U 58.1 7.9 0.00057 37.2 6.6 41 651-691 4-44 (163)
260 d2jdid3 c.37.1.11 (D:82-357) C 56.8 22 0.0016 36.6 10.5 22 446-467 71-92 (276)
261 d1udxa2 c.37.1.8 (A:157-336) O 56.4 2.3 0.00017 40.0 2.4 20 446-465 4-23 (180)
262 d1puia_ c.37.1.8 (A:) Probable 55.0 1.7 0.00012 40.4 1.1 20 445-464 18-37 (188)
263 d1l7vc_ c.37.1.12 (C:) ABC tra 54.7 2.3 0.00017 42.9 2.1 22 444-465 26-47 (231)
264 d1lnza2 c.37.1.8 (A:158-342) O 54.7 2.4 0.00017 40.0 2.1 19 446-464 4-22 (185)
265 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 54.4 3.1 0.00023 39.0 3.0 21 446-466 5-25 (200)
266 d1z63a1 c.37.1.19 (A:432-661) 54.3 25 0.0018 34.0 10.1 25 445-469 33-57 (230)
267 d1azta2 c.37.1.8 (A:35-65,A:20 54.2 2.9 0.00021 41.2 2.8 21 445-465 8-28 (221)
268 d1wb1a4 c.37.1.8 (A:1-179) Elo 53.5 41 0.003 31.1 11.1 20 446-465 8-27 (179)
269 d1t9ha2 c.37.1.8 (A:68-298) Pr 53.1 2.3 0.00017 43.3 1.8 24 444-467 98-121 (231)
270 d1fx0a3 c.37.1.11 (A:97-372) C 52.0 12 0.00087 38.6 7.4 20 446-465 70-89 (276)
271 d1e9ra_ c.37.1.11 (A:) Bacteri 51.6 3.3 0.00024 44.3 2.9 24 445-468 52-75 (433)
272 d1xx6a1 c.37.1.24 (A:2-142) Th 51.3 11 0.00077 35.2 6.2 36 523-561 79-114 (141)
273 d1w1wa_ c.37.1.12 (A:) Smc hea 51.2 3.9 0.00029 42.9 3.5 24 445-468 27-50 (427)
274 d1xbta1 c.37.1.24 (A:18-150) T 50.8 14 0.001 33.8 7.0 34 524-561 73-106 (133)
275 d1ihua2 c.37.1.10 (A:308-586) 50.6 7.3 0.00054 38.8 5.3 26 443-468 20-45 (279)
276 d1j3ba1 c.91.1.1 (A:212-529) P 50.5 3.4 0.00025 43.9 2.7 19 443-461 14-32 (318)
277 d3bgea1 a.80.1.2 (A:251-434) U 50.4 9.6 0.0007 37.3 5.9 41 651-691 6-46 (184)
278 d1svsa1 c.37.1.8 (A:32-60,A:18 49.8 3.9 0.00028 38.1 2.8 20 446-465 5-24 (195)
279 d1e69a_ c.37.1.12 (A:) Smc hea 49.5 8.2 0.0006 38.9 5.5 45 523-567 240-285 (308)
280 d1e69a_ c.37.1.12 (A:) Smc hea 48.5 3.2 0.00023 42.1 2.1 23 445-467 26-48 (308)
281 d1z3ix2 c.37.1.19 (X:92-389) R 47.9 30 0.0022 34.9 9.7 43 426-468 60-104 (298)
282 d1sdma_ c.37.1.9 (A:) Kinesin 47.7 4.6 0.00033 43.2 3.3 35 425-460 55-92 (364)
283 d2ncda_ c.37.1.9 (A:) Kinesin 47.4 4.7 0.00034 43.2 3.3 36 425-460 105-142 (368)
284 g1f2t.1 c.37.1.12 (A:,B:) Rad5 47.0 8.4 0.00061 37.9 5.0 43 524-566 225-269 (292)
285 d2olra1 c.91.1.1 (A:228-540) P 47.0 4.6 0.00034 42.7 3.1 19 443-461 14-32 (313)
286 d1osna_ c.37.1.1 (A:) Thymidin 46.8 3 0.00022 44.5 1.5 24 446-469 8-31 (331)
287 d1tafb_ a.22.1.3 (B:) TAF(II)6 46.7 20 0.0014 29.8 6.3 57 590-646 10-69 (70)
288 d1g7sa4 c.37.1.8 (A:1-227) Ini 46.2 28 0.002 33.8 8.9 114 444-566 6-134 (227)
289 d1f9va_ c.37.1.9 (A:) Kinesin 45.5 8.1 0.00059 40.7 4.8 40 420-460 54-100 (342)
290 d1d2ea3 c.37.1.8 (A:55-250) El 44.2 70 0.0051 30.5 11.4 114 445-566 5-131 (196)
291 d1gkub1 c.37.1.16 (B:1-250) He 44.2 3.2 0.00023 41.1 1.2 22 445-466 60-81 (237)
292 d2qw6a1 a.80.1.2 (A:241-328) U 42.3 22 0.0016 30.7 6.2 39 652-691 3-41 (88)
293 d1ii2a1 c.91.1.1 (A:201-523) P 41.2 6.5 0.00047 41.7 3.1 20 443-462 14-33 (323)
294 d1bg2a_ c.37.1.9 (A:) Kinesin 40.8 11 0.00078 39.3 4.9 40 420-460 46-93 (323)
295 d1goja_ c.37.1.9 (A:) Kinesin 37.7 15 0.0011 38.8 5.4 41 420-460 50-97 (354)
296 d1t5la1 c.37.1.19 (A:2-414) Nu 37.6 18 0.0013 39.2 6.3 45 424-470 14-58 (413)
297 d2r25b1 c.23.1.1 (B:1087-1214) 37.2 30 0.0022 30.8 6.9 74 523-597 50-125 (128)
298 d1ry6a_ c.37.1.9 (A:) Kinesin 36.6 12 0.00086 39.1 4.4 41 420-461 54-103 (330)
299 d2akab1 c.37.1.8 (B:6-304) Dyn 36.6 1.6E+02 0.012 28.9 13.3 40 445-487 28-68 (299)
300 d1g8fa3 c.37.1.15 (A:390-511) 35.3 11 0.0008 34.6 3.3 27 443-469 6-32 (122)
301 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 35.2 13 0.00092 41.1 4.5 22 446-467 27-49 (623)
302 d1x88a1 c.37.1.9 (A:18-362) Ki 34.9 14 0.001 38.7 4.7 40 420-460 51-98 (345)
303 d1zunb3 c.37.1.8 (B:16-237) Su 34.1 80 0.0058 30.7 10.1 23 446-468 12-34 (222)
304 d1c4oa1 c.37.1.19 (A:2-409) Nu 33.0 19 0.0014 39.0 5.4 43 426-470 13-55 (408)
305 d1mvoa_ c.23.1.1 (A:) PhoP rec 32.9 82 0.006 27.2 9.0 72 525-597 47-119 (121)
306 d1a04a2 c.23.1.1 (A:5-142) Nit 32.4 85 0.0062 27.7 9.2 85 525-612 49-135 (138)
307 d1qkka_ c.23.1.1 (A:) Transcri 31.6 51 0.0037 29.5 7.5 74 523-598 43-118 (140)
308 d1cp2a_ c.37.1.10 (A:) Nitroge 31.5 13 0.00096 36.8 3.5 25 445-469 3-27 (269)
309 d1dz3a_ c.23.1.1 (A:) Sporulat 31.3 61 0.0044 28.3 7.8 72 525-597 48-121 (123)
310 d2a9pa1 c.23.1.1 (A:2-118) DNA 31.2 44 0.0032 29.0 6.8 70 525-597 45-116 (117)
311 d1ys7a2 c.23.1.1 (A:7-127) Tra 30.9 45 0.0033 29.2 6.9 75 524-600 45-121 (121)
312 d1jbea_ c.23.1.1 (A:) CheY pro 30.9 68 0.0049 28.1 8.1 76 524-601 49-128 (128)
313 d1v8ka_ c.37.1.9 (A:) Kinesin 30.7 14 0.00099 39.3 3.6 40 420-460 84-131 (362)
314 g1ii8.1 c.37.1.12 (A:,B:) Rad5 30.6 19 0.0014 35.4 4.6 41 525-565 303-345 (369)
315 d2r9ga1 a.80.1.2 (A:238-423) U 30.3 36 0.0026 33.0 6.4 40 651-691 5-44 (186)
316 d2zfia1 c.37.1.9 (A:4-352) Kin 29.4 17 0.0013 38.1 4.2 35 425-460 66-104 (349)
317 d1o6da_ c.116.1.3 (A:) Hypothe 29.0 1.2E+02 0.0085 27.6 9.7 92 494-587 33-126 (147)
318 d1w3ia_ c.1.10.1 (A:) 2-keto-3 28.9 2.6E+02 0.019 27.4 18.8 169 500-671 13-224 (293)
319 d1hyqa_ c.37.1.10 (A:) Cell di 28.2 17 0.0013 34.6 3.7 23 447-469 6-28 (232)
320 d1u0sy_ c.23.1.1 (Y:) CheY pro 28.0 53 0.0039 28.5 6.7 69 525-595 47-117 (118)
321 d1g3qa_ c.37.1.10 (A:) Cell di 27.9 20 0.0014 34.2 4.0 26 444-469 3-29 (237)
322 d1a5ta1 a.80.1.1 (A:208-330) d 27.7 1.1E+02 0.0079 27.5 8.9 77 680-758 32-113 (123)
323 d1yioa2 c.23.1.1 (A:3-130) Res 27.5 1.8E+02 0.013 25.0 10.5 73 523-597 45-119 (128)
324 d1p2fa2 c.23.1.1 (A:1-120) Res 27.4 80 0.0058 27.4 7.9 74 524-599 43-118 (120)
325 d2pl1a1 c.23.1.1 (A:1-119) Pho 26.1 1.6E+02 0.011 25.3 9.7 73 524-598 44-118 (119)
326 d1xhfa1 c.23.1.1 (A:2-122) Aer 25.6 1.1E+02 0.0083 26.3 8.6 71 524-597 46-118 (121)
327 d1zh2a1 c.23.1.1 (A:2-120) Tra 25.5 51 0.0037 28.6 6.1 72 525-598 45-117 (119)
328 d1qo0d_ c.23.1.3 (D:) Positive 25.3 2.1E+02 0.015 25.9 11.0 71 524-597 51-123 (189)
329 d2afhe1 c.37.1.10 (E:1-289) Ni 25.3 19 0.0014 36.0 3.5 24 446-469 5-28 (289)
330 d1mkna_ g.5.1.1 (A:) Midkine, 24.7 10 0.00074 30.3 0.8 12 277-288 45-56 (59)
331 d1ny5a1 c.23.1.1 (A:1-137) Tra 24.4 1.2E+02 0.0086 26.8 8.6 72 524-597 44-117 (137)
332 d1dbwa_ c.23.1.1 (A:) Transcri 24.2 1.5E+02 0.011 25.5 9.2 72 524-597 47-120 (123)
333 d2huec1 a.22.1.1 (C:20-101) Hi 22.7 40 0.0029 28.3 4.5 57 591-647 14-73 (82)
334 d1htaa_ a.22.1.2 (A:) Archaeal 22.1 92 0.0067 24.6 6.5 54 593-646 10-66 (68)
335 d1zgza1 c.23.1.1 (A:2-121) Tor 22.0 1.9E+02 0.014 24.6 9.3 72 524-598 45-118 (120)
336 d1xxxa1 c.1.10.1 (A:5-300) Dih 20.5 3.8E+02 0.027 26.2 17.6 169 501-675 22-240 (296)
No 1
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.7e-37 Score=327.41 Aligned_cols=236 Identities=32% Similarity=0.585 Sum_probs=225.3
Q ss_pred hhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCC
Q 036794 411 LTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRG 490 (1152)
Q Consensus 411 l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g 490 (1152)
|.+||||++|+||+||+++++.|..++..++.+|++|||||+|+|||++|+++++.+++.......+|+.|..|..+..+
T Consensus 2 ~~~KyrP~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 2 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp HHHHTCCSSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred chhhhCCCCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcC
Confidence 67899999999999999999999999999999999999999999999999999999999887788899999999999999
Q ss_pred CccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcchHH
Q 036794 491 KSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDALPHI 570 (1152)
Q Consensus 491 ~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dkL~~a 570 (1152)
.+.+++++++....+++.++++++.+...+..++++||||||+|.|+.+++++|+++||+++.+++||++||+++++.++
T Consensus 82 ~~~~~~~~~~~~~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~i~~~ 161 (239)
T d1njfa_ 82 RFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT 161 (239)
T ss_dssp CCTTEEEEETTCSSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSCHH
T ss_pred CCCeEEEecchhcCCHHHHHHHHHHHHhccccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEEcCCccccChh
Confidence 99999999988888999999999999888888899999999999999999999999999999999999999999999999
Q ss_pred HHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHh-CCCCCHHHHHHHHh
Q 036794 571 IISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLL-GQRISVPLVQELVG 646 (1152)
Q Consensus 571 L~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLl-g~~IT~EdV~elVg 646 (1152)
|++||..+.|++++.+++..++..++..+++.+++++++.|+..+.||+|.+++.|+++... .+.|+.++|.+++|
T Consensus 162 i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd~R~ain~l~~~~~~~~~~I~~~~v~~~lg 238 (239)
T d1njfa_ 162 ILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLG 238 (239)
T ss_dssp HHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTTSBCHHHHHHHHT
T ss_pred HhhhhcccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999997655 46799999999986
No 2
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.1e-32 Score=284.79 Aligned_cols=219 Identities=18% Similarity=0.330 Sum_probs=195.2
Q ss_pred ccchhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccc
Q 036794 408 HQNLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISH 487 (1152)
Q Consensus 408 ~~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i 487 (1152)
..||.+||||++|+|||||+++++.|++++..+..++ +|||||||+|||++|+++|+++++...
T Consensus 2 ~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~~~~-~ll~Gp~G~GKTt~a~~la~~l~~~~~--------------- 65 (224)
T d1sxjb2 2 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELLGRSY--------------- 65 (224)
T ss_dssp CCCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSCCCCC-EEEECSTTSSHHHHHHHHHHHHHGGGH---------------
T ss_pred CCchHhHhCCCCHHHhcCCHHHHHHHHHHHHcCCCCe-EEEECCCCCCchhhHHHHHHHHhcccc---------------
Confidence 3589999999999999999999999999999999887 789999999999999999999987531
Q ss_pred cCCCccceEEeCCCCCCCHHHHHHHHHHHhhC---CCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCC
Q 036794 488 DRGKSRNIKEVGPVGNFDFESILDLLDNMVTS---RPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSL 564 (1152)
Q Consensus 488 ~~g~~~dviEIdaas~~~vdeIreLle~a~~~---P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~ 564 (1152)
..++.+++.....+...+...+...... .....+++|||||+|.+....+++|+..+++++..++||++|+..
T Consensus 66 ----~~~~~~~n~~~~~~~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~ 141 (224)
T d1sxjb2 66 ----ADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQS 141 (224)
T ss_dssp ----HHHEEEECTTSCCSHHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCG
T ss_pred ----ccccccccccccCCceehhhHHHHHHHhhccCCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCch
Confidence 2236677776667777766666654332 234567899999999999999999999999999999999999999
Q ss_pred CcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 036794 565 DALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQEL 644 (1152)
Q Consensus 565 dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~~IT~EdV~el 644 (1152)
++++++|++||..|.|++|+.+++..+|..+++++++.+++++++.|+..+.||+|.|++.||.++...+.|+.+.|.++
T Consensus 142 ~~i~~~l~sr~~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai~~Lq~~~~~~~~i~~~~i~~~ 221 (224)
T d1sxjb2 142 NKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKI 221 (224)
T ss_dssp GGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSBCHHHHHHH
T ss_pred hhhhhHHHHHHHHhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998877778999988887
Q ss_pred Hh
Q 036794 645 VG 646 (1152)
Q Consensus 645 Vg 646 (1152)
+.
T Consensus 222 ~d 223 (224)
T d1sxjb2 222 VD 223 (224)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 3
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=1e-31 Score=281.26 Aligned_cols=219 Identities=21% Similarity=0.378 Sum_probs=190.6
Q ss_pred cchhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCcccccc
Q 036794 409 QNLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHD 488 (1152)
Q Consensus 409 ~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~ 488 (1152)
.||.+||+|++|+|||||+++++.|++++..+..++ +|||||+|+|||++|++||+++++...
T Consensus 2 ~pw~ekyrP~~~~divg~~~~~~~L~~~i~~~~~~~-lLl~Gp~G~GKttl~~~la~~l~~~~~---------------- 64 (227)
T d1sxjc2 2 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNY---------------- 64 (227)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTTCCCC-EEEECSSSSSHHHHHHHHHHHHHTTSH----------------
T ss_pred CchhhhhCCCCHHHccCcHHHHHHHHHHHHcCCCCe-EEEECCCCCChhHHHHHHHHHhhcCCC----------------
Confidence 489999999999999999999999999999999887 889999999999999999999875421
Q ss_pred CCCccceEEeCCCCCCCHHHHHHHHHHHh--hCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 489 RGKSRNIKEVGPVGNFDFESILDLLDNMV--TSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 489 ~g~~~dviEIdaas~~~vdeIreLle~a~--~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
...+.+++.....+.+.......... .......+++|||||+|.+....+++|+++|++++..++|+++|+.+.+
T Consensus 65 ---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~ 141 (227)
T d1sxjc2 65 ---SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHK 141 (227)
T ss_dssp ---HHHEEEECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGG
T ss_pred ---cceeEEecccccCCeeeeecchhhccccccccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHH
Confidence 12245666555566665555544432 2334466789999999999999999999999999999999999999999
Q ss_pred chHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-----CCCCHHHH
Q 036794 567 LPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLG-----QRISVPLV 641 (1152)
Q Consensus 567 L~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg-----~~IT~EdV 641 (1152)
++++|++||..+.|++++..++..+|..++..+++.+++++++.|++.+.||+|.|+|.||.+.... ..||.++|
T Consensus 142 i~~~i~sr~~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v 221 (227)
T d1sxjc2 142 LTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVI 221 (227)
T ss_dssp SCHHHHTTSEEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHH
T ss_pred hHHHHHHHHhhhccccccccccccccccccccccccCCHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCCCCCeeCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999986552 35999999
Q ss_pred HHHHhc
Q 036794 642 QELVGL 647 (1152)
Q Consensus 642 ~elVg~ 647 (1152)
.+++|.
T Consensus 222 ~e~~g~ 227 (227)
T d1sxjc2 222 YECCGA 227 (227)
T ss_dssp HHHTTC
T ss_pred HHHhCc
Confidence 999873
No 4
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.97 E-value=3.9e-31 Score=277.85 Aligned_cols=218 Identities=27% Similarity=0.445 Sum_probs=190.8
Q ss_pred cccchhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCcccc
Q 036794 407 RHQNLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCIS 486 (1152)
Q Consensus 407 ~~~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~ 486 (1152)
..++|.+||+|++|+||+||+.+++.|..++..++.++ +|||||||+|||++|++||+++++...
T Consensus 10 ~~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~-lll~Gp~G~GKTtla~~iak~l~~~~~-------------- 74 (231)
T d1iqpa2 10 LEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPH-LLFAGPPGVGKTTAALALARELFGENW-------------- 74 (231)
T ss_dssp TTSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCCCE-EEEESCTTSSHHHHHHHHHHHHHGGGH--------------
T ss_pred hhchHHHHhCCCCHHHccCcHHHHHHHHHHHHcCCCCe-EEEECCCCCcHHHHHHHHHHHHHhccc--------------
Confidence 45899999999999999999999999999999998876 889999999999999999999987521
Q ss_pred ccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCC--CCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCC
Q 036794 487 HDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRP--PSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSL 564 (1152)
Q Consensus 487 i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~--~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~ 564 (1152)
..+++++++....+.+.++........... ...+.|++|||+|.+....+++|+++++++..+++||++||..
T Consensus 75 -----~~~~~e~n~s~~~~~~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~ 149 (231)
T d1iqpa2 75 -----RHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYS 149 (231)
T ss_dssp -----HHHEEEEETTCHHHHHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCG
T ss_pred -----CCCeeEEecCcccchhHHHHHHHHHHhhhhccCCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCCh
Confidence 123566665544445555555555433322 2467899999999999999999999999999999999999999
Q ss_pred CcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCHHHHHHH
Q 036794 565 DALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQEL 644 (1152)
Q Consensus 565 dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~~IT~EdV~el 644 (1152)
.+++++|.+||..+.|++++..++..+|..++.++++.+++++++.|++.+.||+|.+++.|+.++...+.||.++|..+
T Consensus 150 ~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~gdiR~ai~~Lq~~~~~~~~it~e~v~~v 229 (231)
T d1iqpa2 150 SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMV 229 (231)
T ss_dssp GGSCHHHHHTEEEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSEECHHHHHHH
T ss_pred hhchHhHhCccccccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCcCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888999988765
No 5
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97 E-value=8e-30 Score=266.85 Aligned_cols=219 Identities=25% Similarity=0.433 Sum_probs=181.3
Q ss_pred chhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccC
Q 036794 410 NLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDR 489 (1152)
Q Consensus 410 ~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~ 489 (1152)
||++||+|++|+||+||+++++.|++++..++.++ +||+||+|+|||++++++++++.+.....
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~-lll~Gp~G~GKTtl~~~i~~~l~~~~~~~--------------- 64 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTILALTKELYGPDLMK--------------- 64 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTTCCC-EEEECSTTSSHHHHHHHHHHHHHHHHHHT---------------
T ss_pred CcchhhCCCCHHHccCcHHHHHHHHHHHHcCCCCe-EEEECCCCCChHHHHHHHHHHHcCCcccc---------------
Confidence 79999999999999999999999999999988876 89999999999999999999986542111
Q ss_pred CCccceEEeCCCCCCCHHHHHHHHHHHhhC------------CCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEE
Q 036794 490 GKSRNIKEVGPVGNFDFESILDLLDNMVTS------------RPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVF 557 (1152)
Q Consensus 490 g~~~dviEIdaas~~~vdeIreLle~a~~~------------P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~Vif 557 (1152)
....+++.....+...+...+...... .....++||||||+|.++...++.|+++++.++..++|
T Consensus 65 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~ 141 (237)
T d1sxjd2 65 ---SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRF 141 (237)
T ss_dssp ---TSEEEECSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEE
T ss_pred ---cchhheeccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccc
Confidence 112233332223333322222221100 12345789999999999999999999999999999999
Q ss_pred EEEcCCCCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----
Q 036794 558 ILVSSSLDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLL----- 632 (1152)
Q Consensus 558 ILaTN~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLl----- 632 (1152)
|++++...+++++|++||..|.|++++..++..+|..++.++++.+++++++.|+..+.||+|.+++.|+.++..
T Consensus 142 i~~~~~~~~~~~~l~sr~~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd~R~ai~~L~~~~~~~~~~~ 221 (237)
T d1sxjd2 142 CLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLG 221 (237)
T ss_dssp EEEESCGGGSCHHHHHHSEEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHC
T ss_pred cccccccccccccccchhhhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987443
Q ss_pred -CCCCCHHHHHHHHhc
Q 036794 633 -GQRISVPLVQELVGL 647 (1152)
Q Consensus 633 -g~~IT~EdV~elVg~ 647 (1152)
++.||.++|++++|.
T Consensus 222 ~~~~It~~~i~e~~g~ 237 (237)
T d1sxjd2 222 DGKNITSTQVEELAGV 237 (237)
T ss_dssp SCCCCCHHHHHHHHTC
T ss_pred CCCccCHHHHHHhhCc
Confidence 346999999999873
No 6
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.96 E-value=8.7e-29 Score=259.06 Aligned_cols=198 Identities=17% Similarity=0.258 Sum_probs=184.7
Q ss_pred CcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCC---
Q 036794 425 GQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPV--- 501 (1152)
Q Consensus 425 GQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaa--- 501 (1152)
+++.+.+.|.+.+..++.+|+|||+||+|+|||++|+.+|+.+.|.......+|+.|..|..+..+.+.++..+...
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGK 85 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTC
T ss_pred ccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhcc
Confidence 57788899999999999999999999999999999999999999998888899999999999999999999998543
Q ss_pred CCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcchHHHHccceEEEec
Q 036794 502 GNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDALPHIIISRCQKFFFP 581 (1152)
Q Consensus 502 s~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dkL~~aL~SR~qvI~F~ 581 (1152)
....+++++++.+.+...+..++++||||||+|.|+.+++++|+++||+|+.+++||++|++++++.++|+|||+.|.|+
T Consensus 86 ~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~tI~SRc~~i~~~ 165 (207)
T d1a5ta2 86 NTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLA 165 (207)
T ss_dssp SSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHHHHTTSEEEECC
T ss_pred cccccchhhHHhhhhhhccccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhhhcceeEEEecC
Confidence 44678999999999988898899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 036794 582 KMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLE 627 (1152)
Q Consensus 582 ~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LE 627 (1152)
+++.+++..+|. +.+.++++++..++..++|++|.|+++||
T Consensus 166 ~~~~~~~~~~L~-----~~~~~~~~~~~~i~~~s~Gs~r~al~~le 206 (207)
T d1a5ta2 166 PPPEQYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQ 206 (207)
T ss_dssp CCCHHHHHHHHH-----HHCCCCHHHHHHHHHHTTTCHHHHHHTTS
T ss_pred CCCHHHHHHHHH-----HcCCCCHHHHHHHHHHcCCCHHHHHHHhC
Confidence 999999998885 34678999999999999999999999875
No 7
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=3.5e-28 Score=256.62 Aligned_cols=223 Identities=23% Similarity=0.352 Sum_probs=168.9
Q ss_pred hhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCC-----CCCCCCCccc
Q 036794 411 LTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQP-----KPCGFCNSCI 485 (1152)
Q Consensus 411 l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~-----epcg~c~~c~ 485 (1152)
|++||+|++|+|++|++.++..|+.++..+...+.+|||||+|||||++|+++|+++.+...... ..+..+....
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchh
Confidence 89999999999999999999999999988887778999999999999999999999865432211 1111111111
Q ss_pred cccCCCccceEEeCCC--CCCCHHHHHHHHHHHhh----------CCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCC
Q 036794 486 SHDRGKSRNIKEVGPV--GNFDFESILDLLDNMVT----------SRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPR 553 (1152)
Q Consensus 486 ~i~~g~~~dviEIdaa--s~~~vdeIreLle~a~~----------~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~ 553 (1152)
.+..........+... +......+...+..... ....+..+++||||+|.|+...++.|++.+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~ 160 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSK 160 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTT
T ss_pred hhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccccchhhhcccccccc
Confidence 1111111222223221 11222223333332211 11234578999999999999999999999999999
Q ss_pred CEEEEEEcCCCCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCC-HHHHHHHHHhcCCCHHHHHHHHHHHHHh
Q 036794 554 RVVFILVSSSLDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEID-KDALKLIASRSDGSLRDAEMTLEQLSLL 632 (1152)
Q Consensus 554 ~VifILaTN~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id-~dALelLAe~s~GDLR~Ain~LEkLsLl 632 (1152)
+++||++||++++++++|++||+.|.|++|+..++.++|..++..+++.++ +++++.|+..+.||+|.+++.||.++..
T Consensus 161 ~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~~ 240 (252)
T d1sxje2 161 NIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 240 (252)
T ss_dssp TEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHHHHHHHTHHHHT
T ss_pred cccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999875 7889999999999999999999988775
Q ss_pred C
Q 036794 633 G 633 (1152)
Q Consensus 633 g 633 (1152)
+
T Consensus 241 ~ 241 (252)
T d1sxje2 241 N 241 (252)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93 E-value=6.2e-26 Score=239.74 Aligned_cols=214 Identities=19% Similarity=0.261 Sum_probs=160.0
Q ss_pred cchhhhhCCCCcCcccCcHHHHHHHHHHHHh----------------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCC
Q 036794 409 QNLTQKYMPRTFRDLVGQNLVAQALSNAVMR----------------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSL 472 (1152)
Q Consensus 409 ~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~----------------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~ 472 (1152)
+.|++||+|++|+||+|++.+++.|.+++.. ....+++|||||||||||++|+++|+++++...
T Consensus 2 ~lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~ 81 (253)
T d1sxja2 2 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDIL 81 (253)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEE
T ss_pred CccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhh
Confidence 5799999999999999999999999998864 122357999999999999999999999887643
Q ss_pred CCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHH--------------HhhCCCCCCceEEEEeCCCCCCH
Q 036794 473 EQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDN--------------MVTSRPPSQYRIFVFDDCDTLSP 538 (1152)
Q Consensus 473 e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~--------------a~~~P~~a~~kVVIIDEID~Ls~ 538 (1152)
..+.+ ...+...+...+.. .......+.+.++++||++.+..
T Consensus 82 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~ 137 (253)
T d1sxja2 82 EQNAS------------------------DVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSG 137 (253)
T ss_dssp EECTT------------------------SCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCT
T ss_pred ccccc------------------------cchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeecccccc
Confidence 22211 11111111111110 11223345678999999999987
Q ss_pred HHHHHHHHHHh---hCCCCEEEEEEcCCCCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhc
Q 036794 539 DSWSAISKVVD---RAPRRVVFILVSSSLDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRS 615 (1152)
Q Consensus 539 eaqnaLLklLE---epp~~VifILaTN~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s 615 (1152)
..+..+..+++ .....+++|..++... ..+.+++||..|.|++|+..++..+|+.++.++|+.+++++++.|+..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~ii~i~~~~~~~-~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s 216 (253)
T d1sxja2 138 GDRGGVGQLAQFCRKTSTPLILICNERNLP-KMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTT 216 (253)
T ss_dssp TSTTHHHHHHHHHHHCSSCEEEEESCTTSS-TTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHT
T ss_pred chhhhhHHHhhhhccccccccccccccccc-ccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 76554444444 4333333333333333 4446999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCCCCHHHHHHHHhc
Q 036794 616 DGSLRDAEMTLEQLSLLGQRISVPLVQELVGL 647 (1152)
Q Consensus 616 ~GDLR~Ain~LEkLsLlg~~IT~EdV~elVg~ 647 (1152)
+||+|.+++.|+.++...+.|+.+.|.++...
T Consensus 217 ~GDiR~ai~~L~~~~~~~~~i~~~~~~~~~~~ 248 (253)
T d1sxja2 217 RGDIRQVINLLSTISTTTKTINHENINEISKA 248 (253)
T ss_dssp TTCHHHHHHHHTHHHHHSSCCCTTHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCCHHHHHHHhch
Confidence 99999999999999888888998888777643
No 9
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.93 E-value=6.3e-25 Score=230.89 Aligned_cols=204 Identities=19% Similarity=0.221 Sum_probs=168.4
Q ss_pred hhCCCCcCcccCcHHHHHHHHHHHHh----CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccC
Q 036794 414 KYMPRTFRDLVGQNLVAQALSNAVMR----RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDR 489 (1152)
Q Consensus 414 KyRP~sFddLVGQe~v~q~Lk~aL~~----gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~ 489 (1152)
-.||++|+|+|||+++++.|..++.. +...+++|||||||||||++|++||+++++..
T Consensus 2 ~~RP~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~------------------ 63 (238)
T d1in4a2 2 FLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNI------------------ 63 (238)
T ss_dssp TTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCE------------------
T ss_pred CCCCCcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhccCCCc------------------
Confidence 36999999999999999999988753 55556799999999999999999999998762
Q ss_pred CCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhC------------------
Q 036794 490 GKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRA------------------ 551 (1152)
Q Consensus 490 g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEep------------------ 551 (1152)
.++++........+...+... ..+.+++|||++.+....++.|+..++..
T Consensus 64 ------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (238)
T d1in4a2 64 ------HVTSGPVLVKQGDMAAILTSL------ERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRID 131 (238)
T ss_dssp ------EEEETTTCCSHHHHHHHHHHC------CTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC--------------
T ss_pred ------ccccCcccccHHHHHHHHHhh------ccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccC
Confidence 222232333445555555443 45689999999999999999999888762
Q ss_pred CCCEEEEEEcCCCCcchHHHHccceE-EEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 036794 552 PRRVVFILVSSSLDALPHIIISRCQK-FFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLS 630 (1152)
Q Consensus 552 p~~VifILaTN~~dkL~~aL~SR~qv-I~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLs 630 (1152)
..+++||++|+++..+++++++||.. +.|++++..++..++..++..+++.++++++..++.++.||+|.+++.|+.+.
T Consensus 132 ~~~~~~I~at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~gd~R~ai~~l~~~~ 211 (238)
T d1in4a2 132 IQPFTLVGATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVR 211 (238)
T ss_dssp -CCCEEEEEESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34789999999999999999999875 78999999999999999999999999999999999999999999999999864
Q ss_pred Hh-----CCCCCHHHHHHHHhc
Q 036794 631 LL-----GQRISVPLVQELVGL 647 (1152)
Q Consensus 631 Ll-----g~~IT~EdV~elVg~ 647 (1152)
.. .+.||.+.+.+++..
T Consensus 212 ~~~~~~~~~~it~~~~~~al~~ 233 (238)
T d1in4a2 212 DMLTVVKADRINTDIVLKTMEV 233 (238)
T ss_dssp HHHHHHTCSSBCHHHHHHHHHH
T ss_pred HHHHHhcCCccCHHHHHHHHHh
Confidence 22 356998888877653
No 10
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.91 E-value=1.3e-23 Score=221.19 Aligned_cols=204 Identities=17% Similarity=0.190 Sum_probs=162.9
Q ss_pred hCCCCcCcccCcHHHHHHHHHHHHhC----CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCC
Q 036794 415 YMPRTFRDLVGQNLVAQALSNAVMRR----KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRG 490 (1152)
Q Consensus 415 yRP~sFddLVGQe~v~q~Lk~aL~~g----ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g 490 (1152)
.||++|+|+|||+++++.|+.++... ...+.+|||||||||||++|+++|+++++..
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~------------------- 63 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNL------------------- 63 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHHTCCE-------------------
T ss_pred cCCCCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCe-------------------
Confidence 48999999999999999999998753 3345699999999999999999999987652
Q ss_pred CccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh------------------CC
Q 036794 491 KSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR------------------AP 552 (1152)
Q Consensus 491 ~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe------------------pp 552 (1152)
..+++............+.. ......+++|||+|.+....+..|+..+++ ..
T Consensus 64 -----~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~ 133 (239)
T d1ixsb2 64 -----RVTSGPAIEKPGDLAAILAN-----SLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLEL 133 (239)
T ss_dssp -----EEEETTTCCSHHHHHHHHHT-----TCCTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEEC
T ss_pred -----EeccCCccccchhhHHHHHh-----hccCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCC
Confidence 22222222233333333322 224567999999999999999999998875 23
Q ss_pred CCEEEEEEcCCCCc-chHHHHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 036794 553 RRVVFILVSSSLDA-LPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSL 631 (1152)
Q Consensus 553 ~~VifILaTN~~dk-L~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsL 631 (1152)
.+++||++|+++.. .++.+.++|..+.|..++.+++..++..++..+++.++++++..++..+.||+|.+++.|+.+..
T Consensus 134 ~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~ 213 (239)
T d1ixsb2 134 PRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRD 213 (239)
T ss_dssp CCCEEEEEESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSSHHHHHHHHHHHHH
T ss_pred CCEEEEeeccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 46778888887764 55667778889999999999999999999999999999999999999999999999999999864
Q ss_pred h-----CCCCCHHHHHHHHhc
Q 036794 632 L-----GQRISVPLVQELVGL 647 (1152)
Q Consensus 632 l-----g~~IT~EdV~elVg~ 647 (1152)
+ .+.||.+.+.+++..
T Consensus 214 ~a~~~~~~~It~~~~~~~l~~ 234 (239)
T d1ixsb2 214 FAQVAGEEVITRERALEALAA 234 (239)
T ss_dssp HHTTSCCSCBCHHHHHHHHHH
T ss_pred HHHHhCCCCcCHHHHHHHHhh
Confidence 4 235999988887753
No 11
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.86 E-value=2.3e-21 Score=201.64 Aligned_cols=184 Identities=17% Similarity=0.223 Sum_probs=143.9
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCC-CCHH
Q 036794 429 VAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGN-FDFE 507 (1152)
Q Consensus 429 v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~-~~vd 507 (1152)
.++.|++++.++. ++.|||+||+|+|||++|..+++.+.... ..++|++++.+.+. .+++
T Consensus 2 ~~~~l~~~i~~~~-~~~~l~~G~~g~gk~~~a~~l~~~i~~~~------------------~~h~D~~~i~~~~~~I~Id 62 (198)
T d2gnoa2 2 QLETLKRIIEKSE-GISILINGEDLSYPREVSLELPEYVEKFP------------------PKASDVLEIDPEGENIGID 62 (198)
T ss_dssp HHHHHHHHHHTCS-SEEEEEECSSSSHHHHHHHHHHHHHHTSC------------------CCTTTEEEECCSSSCBCHH
T ss_pred HHHHHHHHHhcCC-CceEEEECCCCCCHHHHHHHHHHHHhccc------------------cCCCCEEEEeCCcCCCCHH
Confidence 3577888888775 66799999999999999999999875432 23578999987653 6899
Q ss_pred HHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcchHHHHccceEEEecCCChhH
Q 036794 508 SILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDALPHIIISRCQKFFFPKMKDAD 587 (1152)
Q Consensus 508 eIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dkL~~aL~SR~qvI~F~~p~~~E 587 (1152)
+++++.+.+...|..++++|+||||+|.|+.+++++||++||+||.+++||++|++++++++||+|||+.+.|+++..
T Consensus 63 ~IR~i~~~~~~~~~~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p~~-- 140 (198)
T d2gnoa2 63 DIRTIKDFLNYSPELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKE-- 140 (198)
T ss_dssp HHHHHHHHHTSCCSSSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCHH--
T ss_pred HHHHHHHHHhhCcccCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCchH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred HHHHHHHH----HHH-----cCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC
Q 036794 588 IIYTLQWI----ASK-----EGIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ 634 (1152)
Q Consensus 588 I~eiL~~i----akk-----eGl~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~ 634 (1152)
...++... .+. .+.....+++..++....| +++.++.++...+..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ld~~~~l~k 195 (198)
T d2gnoa2 141 FRDLVKEKIGDLWEELPLLERDFKTALEAYKLGAEKLSG-LMESLKVLETEKLLKK 195 (198)
T ss_dssp HHHHHHHHHTTHHHHCGGGGTCHHHHHHHHHHHHHHHHH-HHHHHHHSCHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHH
Confidence 23333222 111 1222344566666665544 6666666665554443
No 12
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.77 E-value=2.7e-18 Score=184.05 Aligned_cols=199 Identities=20% Similarity=0.238 Sum_probs=146.0
Q ss_pred CCcCcccCcHHHHHHHHHHHHh-----------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCcccc
Q 036794 418 RTFRDLVGQNLVAQALSNAVMR-----------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCIS 486 (1152)
Q Consensus 418 ~sFddLVGQe~v~q~Lk~aL~~-----------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~ 486 (1152)
.+|+||+|.+.+++.|.+.+.- ...+.++|||||||||||++|++||+++++.
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~---------------- 69 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVP---------------- 69 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCC----------------
T ss_pred CcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCC----------------
Confidence 4899999999999888765521 2445689999999999999999999998765
Q ss_pred ccCCCccceEEeCCC----CCC--CHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCH--------------HHHHHHHH
Q 036794 487 HDRGKSRNIKEVGPV----GNF--DFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSP--------------DSWSAISK 546 (1152)
Q Consensus 487 i~~g~~~dviEIdaa----s~~--~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~--------------eaqnaLLk 546 (1152)
++.++.. ... ....++++++.+.. ..+.||||||+|.+.. ...+.|+.
T Consensus 70 --------~~~i~~~~l~~~~~g~~~~~l~~~f~~a~~----~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~ 137 (247)
T d1ixza_ 70 --------FITASGSDFVEMFVGVGAARVRDLFETAKR----HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLV 137 (247)
T ss_dssp --------EEEEEHHHHHHSCTTHHHHHHHHHHHHHTT----SSSEEEEEETHHHHHC---------CHHHHHHHHHHHH
T ss_pred --------EEEEEhHHhhhccccHHHHHHHHHHHHHHH----cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHH
Confidence 2222211 111 22446677776642 2357999999987621 13567888
Q ss_pred HHhh--CCCCEEEEEEcCCCCcchHHHHc--cce-EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCC-CHH
Q 036794 547 VVDR--APRRVVFILVSSSLDALPHIIIS--RCQ-KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDG-SLR 620 (1152)
Q Consensus 547 lLEe--pp~~VifILaTN~~dkL~~aL~S--R~q-vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~G-DLR 620 (1152)
.|+. ....++||++||.++.++++|++ |+. .|.|++|+.+++.++++.++...... .+..+..|++.+.| ..+
T Consensus 138 ~~d~~~~~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~ 216 (247)
T d1ixza_ 138 EMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLA-EDVDLALLAKRTPGFVGA 216 (247)
T ss_dssp HHHTCCTTCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHH
T ss_pred HhhCCCCCCCEEEEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCc-cccCHHHHHHHCCCCCHH
Confidence 8875 34678899999999999999984 786 79999999999999999888765543 23347888998877 666
Q ss_pred HHHHHHHHHHHh-----CCCCCHHHHHHHH
Q 036794 621 DAEMTLEQLSLL-----GQRISVPLVQELV 645 (1152)
Q Consensus 621 ~Ain~LEkLsLl-----g~~IT~EdV~elV 645 (1152)
++.++++.+.+. ...|+.+|+.+++
T Consensus 217 di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 217 DLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcCHHHHHHhh
Confidence 777777665433 2369999988775
No 13
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.76 E-value=4.8e-18 Score=183.05 Aligned_cols=208 Identities=16% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCCcCcccCcHHHHHHHHHHHHh-----------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccc
Q 036794 417 PRTFRDLVGQNLVAQALSNAVMR-----------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCI 485 (1152)
Q Consensus 417 P~sFddLVGQe~v~q~Lk~aL~~-----------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~ 485 (1152)
..+|+||+|.+.+++.|.+.+.. ...+.++|||||||||||++|+++|++++.....
T Consensus 8 ~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~------------ 75 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFT------------ 75 (256)
T ss_dssp CCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEE------------
T ss_pred CCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEE------------
Confidence 34899999999999988876532 3456789999999999999999999998765211
Q ss_pred cccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCH--------------HHHHHHHHHHhh-
Q 036794 486 SHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSP--------------DSWSAISKVVDR- 550 (1152)
Q Consensus 486 ~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~--------------eaqnaLLklLEe- 550 (1152)
+..+... +.........++.+++.+.. ..+.||||||+|.+.. ...+.|+..++.
T Consensus 76 -i~~~~l~-----~~~~g~~~~~l~~~f~~A~~----~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~ 145 (256)
T d1lv7a_ 76 -ISGSDFV-----EMFVGVGASRVRDMFEQAKK----AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF 145 (256)
T ss_dssp -ECSCSST-----TSCCCCCHHHHHHHHHHHHT----TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTC
T ss_pred -EEhHHhh-----hcchhHHHHHHHHHHHHHHH----cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCC
Confidence 1111100 01111234668888887753 2447999999987521 135678888875
Q ss_pred -CCCCEEEEEEcCCCCcchHHHHc--cce-EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCC-CHHHHHHH
Q 036794 551 -APRRVVFILVSSSLDALPHIIIS--RCQ-KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDG-SLRDAEMT 625 (1152)
Q Consensus 551 -pp~~VifILaTN~~dkL~~aL~S--R~q-vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~G-DLR~Ain~ 625 (1152)
....++||++||.++.+++++++ |+. .|.|++|+.+++.++++....+..+. .+..+..|++.+.| +.+++.++
T Consensus 146 ~~~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adi~~l 224 (256)
T d1lv7a_ 146 EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANL 224 (256)
T ss_dssp CSSSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHH
T ss_pred CCCCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcC-cccCHHHHHHhCCCCCHHHHHHH
Confidence 34578999999999999999986 785 79999999999999999888766544 33457788888877 77778788
Q ss_pred HHHHHHh---C--CCCCHHHHHHHHhc
Q 036794 626 LEQLSLL---G--QRISVPLVQELVGL 647 (1152)
Q Consensus 626 LEkLsLl---g--~~IT~EdV~elVg~ 647 (1152)
++.+++. . ..|+.+++.+++..
T Consensus 225 ~~~A~~~a~~~~~~~i~~~d~~~Al~r 251 (256)
T d1lv7a_ 225 VNEAALFAARGNKRVVSMVEFEKAKDK 251 (256)
T ss_dssp HHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 8765433 2 24888888877654
No 14
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.70 E-value=2.2e-16 Score=165.08 Aligned_cols=233 Identities=18% Similarity=0.136 Sum_probs=154.2
Q ss_pred cchhhhhCCCCcCcccCcHHHHHHHHHHHHh-----CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCC--CCCCCC
Q 036794 409 QNLTQKYMPRTFRDLVGQNLVAQALSNAVMR-----RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQP--KPCGFC 481 (1152)
Q Consensus 409 ~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~-----gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~--epcg~c 481 (1152)
.+|...|+|+ .|+|++..++.|..+|.. +..+.++||+||||||||++|+.|++.+........ ..|..+
T Consensus 7 ~~l~~~y~p~---~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~ 83 (276)
T d1fnna2 7 SVFSPSYVPK---RLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIY 83 (276)
T ss_dssp GGGSTTCCCS---CCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTC
T ss_pred ccCCCCCCCC---CCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhh
Confidence 4677789875 569999888887777754 345568999999999999999999999865422110 001000
Q ss_pred CccccccCCCccceEEeCCCCCCCHHHHH-HHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh----CCCCEE
Q 036794 482 NSCISHDRGKSRNIKEVGPVGNFDFESIL-DLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR----APRRVV 556 (1152)
Q Consensus 482 ~~c~~i~~g~~~dviEIdaas~~~vdeIr-eLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe----pp~~Vi 556 (1152)
..................+........+. .+.+..... ....++++|+++.+.......+...+.. ....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T d1fnna2 84 RNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRER---DLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIA 160 (276)
T ss_dssp CSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHT---TCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEE
T ss_pred hhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhc---ccccccchhHHHHhhhhhhhhHHHHHhccccccccceE
Confidence 00000000000000000111122233332 233333222 3457889999999988877766665543 456788
Q ss_pred EEEEcCCCC---cchHHHHccce--EEEecCCChhHHHHHHHHHHHHc--CCCCCHHHHHHHHHh---------cCCCHH
Q 036794 557 FILVSSSLD---ALPHIIISRCQ--KFFFPKMKDADIIYTLQWIASKE--GIEIDKDALKLIASR---------SDGSLR 620 (1152)
Q Consensus 557 fILaTN~~d---kL~~aL~SR~q--vI~F~~p~~~EI~eiL~~iakke--Gl~Id~dALelLAe~---------s~GDLR 620 (1152)
||++++... .+.+.+.+|+. .+.|++++.+++.++|..+++.. ...+++++++.|++. +.||+|
T Consensus 161 ~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R 240 (276)
T d1fnna2 161 LVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDAR 240 (276)
T ss_dssp EEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHH
T ss_pred EeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHH
Confidence 888888753 56677888874 69999999999999999888763 445899999999886 479999
Q ss_pred HHHHHHHHHHHh-----CCCCCHHHHHHHHhc
Q 036794 621 DAEMTLEQLSLL-----GQRISVPLVQELVGL 647 (1152)
Q Consensus 621 ~Ain~LEkLsLl-----g~~IT~EdV~elVg~ 647 (1152)
.++++|+.+... ...|+.+||+++...
T Consensus 241 ~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~ 272 (276)
T d1fnna2 241 LAIDILYRSAYAAQQNGRKHIAPEDVRKSSKE 272 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence 999999987544 236999999987654
No 15
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2.8e-16 Score=168.68 Aligned_cols=183 Identities=16% Similarity=0.182 Sum_probs=134.0
Q ss_pred CcCcccCcHHHHHHHHHHHHh-----------C-CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCcccc
Q 036794 419 TFRDLVGQNLVAQALSNAVMR-----------R-KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCIS 486 (1152)
Q Consensus 419 sFddLVGQe~v~q~Lk~aL~~-----------g-ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~ 486 (1152)
+|+||+|.+.+++.|.+.+.. | ..+.+||||||||||||++|+++|++++...
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~--------------- 66 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFF--------------- 66 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEE---------------
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeE---------------
Confidence 699999999999999887532 2 3456899999999999999999999987652
Q ss_pred ccCCCccceEEeCC------CCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHH-----------HHHHHHHHHh
Q 036794 487 HDRGKSRNIKEVGP------VGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPD-----------SWSAISKVVD 549 (1152)
Q Consensus 487 i~~g~~~dviEIda------as~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~e-----------aqnaLLklLE 549 (1152)
+.++. ........++.+++.+... .+.||||||+|.+... ..+.++..++
T Consensus 67 ---------~~i~~~~l~~~~~g~~~~~l~~~f~~A~~~----~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~ 133 (258)
T d1e32a2 67 ---------FLINGPEIMSKLAGESESNLRKAFEEAEKN----APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD 133 (258)
T ss_dssp ---------EEECHHHHTTSCTTHHHHHHHHHHHHHHHT----CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHH
T ss_pred ---------EEEEchhhcccccccHHHHHHHHHHHHHhc----CCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccc
Confidence 22221 1112245677777776543 3479999999998532 2344454444
Q ss_pred h--CCCCEEEEEEcCCCCcchHHHHc--cce-EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCC-CHHHHH
Q 036794 550 R--APRRVVFILVSSSLDALPHIIIS--RCQ-KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDG-SLRDAE 623 (1152)
Q Consensus 550 e--pp~~VifILaTN~~dkL~~aL~S--R~q-vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~G-DLR~Ai 623 (1152)
. ...++++|++||.++.+++++++ |+. .|.|+.|+.+++..+++..+....+. ++..+..|+..+.| ..+++.
T Consensus 134 ~~~~~~~vlvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adl~ 212 (258)
T d1e32a2 134 GLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA-DDVDLEQVANETHGHVGADLA 212 (258)
T ss_dssp TCCCSSCEEEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBC-TTCCHHHHHHHCTTCCHHHHH
T ss_pred cccccCCccEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcccc-cccchhhhhhcccCCCHHHHH
Confidence 3 45678999999999999999987 786 69999999999999999887654332 22237889999887 666666
Q ss_pred HHHHHHH
Q 036794 624 MTLEQLS 630 (1152)
Q Consensus 624 n~LEkLs 630 (1152)
++++.++
T Consensus 213 ~lv~~A~ 219 (258)
T d1e32a2 213 ALCSEAA 219 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 16
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.64 E-value=3.4e-15 Score=156.70 Aligned_cols=234 Identities=21% Similarity=0.270 Sum_probs=143.3
Q ss_pred ccchhhhhCCCCcCcccCcHHHHHHHH----HHHHhCCCCc----EEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCC
Q 036794 408 HQNLTQKYMPRTFRDLVGQNLVAQALS----NAVMRRKVGL----LYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCG 479 (1152)
Q Consensus 408 ~~~l~eKyRP~sFddLVGQe~v~q~Lk----~aL~~gri~~----~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg 479 (1152)
.++|..+|+|. .|+|.+..++.|. ..+..+..+. .|+|+||||||||++++++++.+.........++.
T Consensus 6 ~~~l~~~~~P~---~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~ 82 (287)
T d1w5sa2 6 RRVFDENYIPP---ELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVK 82 (287)
T ss_dssp GGGGSTTCCCS---SCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred hhhcCCccCCC---CCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCce
Confidence 45788899985 4566655555544 4444444332 57889999999999999999998643222111100
Q ss_pred -CCCccccccCCCc---cceEEeC---CCCCCCHHHHHHHH-HHHhhCCCCCCceEEEEeCCCCCC------HHHHHHHH
Q 036794 480 -FCNSCISHDRGKS---RNIKEVG---PVGNFDFESILDLL-DNMVTSRPPSQYRIFVFDDCDTLS------PDSWSAIS 545 (1152)
Q Consensus 480 -~c~~c~~i~~g~~---~dviEId---aas~~~vdeIreLl-e~a~~~P~~a~~kVVIIDEID~Ls------~eaqnaLL 545 (1152)
.+..|........ ......+ .........+.+.+ +..... ....++++||+|.+. .+....|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~iide~d~l~~~~~~~~~~~~~l~ 159 (287)
T d1w5sa2 83 QAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVE---NHYLLVILDEFQSMLSSPRIAAEDLYTLL 159 (287)
T ss_dssp EEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHH---TCEEEEEEESTHHHHSCTTSCHHHHHHHH
T ss_pred eeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhc---cCccccceeEEEEeccccccchhHHHHHH
Confidence 0111111100000 0000000 01112222222222 222211 445788999998762 34455566
Q ss_pred HHHhhC-----CCCEEEEEEcCCCCc------chHHHHcc-ceEEEecCCChhHHHHHHHHHHHHc--CCCCCHHHHHHH
Q 036794 546 KVVDRA-----PRRVVFILVSSSLDA------LPHIIISR-CQKFFFPKMKDADIIYTLQWIASKE--GIEIDKDALKLI 611 (1152)
Q Consensus 546 klLEep-----p~~VifILaTN~~dk------L~~aL~SR-~qvI~F~~p~~~EI~eiL~~iakke--Gl~Id~dALelL 611 (1152)
.+++.. ...+.+|++++..+. ..+.+.+| +..+.|++++.+++.+++..+++.. ...+++++++++
T Consensus 160 ~l~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~i 239 (287)
T d1w5sa2 160 RVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELI 239 (287)
T ss_dssp THHHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHH
T ss_pred HHHHhcchhhcccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHH
Confidence 555542 357777887775542 22445555 5689999999999999999998764 345899999999
Q ss_pred HHhc------CCCHHHHHHHHHHHHHh-----CCCCCHHHHHHHHhc
Q 036794 612 ASRS------DGSLRDAEMTLEQLSLL-----GQRISVPLVQELVGL 647 (1152)
Q Consensus 612 Ae~s------~GDLR~Ain~LEkLsLl-----g~~IT~EdV~elVg~ 647 (1152)
++.+ .||+|.++++|+.++.. .+.||.++|++++..
T Consensus 240 a~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 240 SDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 9875 69999999999987544 246999999988753
No 17
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62 E-value=2.5e-16 Score=169.89 Aligned_cols=192 Identities=19% Similarity=0.229 Sum_probs=129.0
Q ss_pred CC-CcCcccCcHHHHHHHHHHHHh-----------C-CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCc
Q 036794 417 PR-TFRDLVGQNLVAQALSNAVMR-----------R-KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNS 483 (1152)
Q Consensus 417 P~-sFddLVGQe~v~q~Lk~aL~~-----------g-ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~ 483 (1152)
|+ +|+||+|.+++++.|.+.+.. | ..+.+||||||||||||++|+++|.++++..... .
T Consensus 2 p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~--------~ 73 (265)
T d1r7ra3 2 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISI--------K 73 (265)
T ss_dssp CCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEE--------C
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEE--------E
Confidence 44 899999998887777765531 2 3345899999999999999999999998652111 0
Q ss_pred cccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHH--------------HHHHHHHHHh
Q 036794 484 CISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPD--------------SWSAISKVVD 549 (1152)
Q Consensus 484 c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~e--------------aqnaLLklLE 549 (1152)
|..+. ..........++.++..+... .+.||+|||+|.+... ..+.|+..|+
T Consensus 74 ~~~l~----------~~~~~~~~~~l~~~f~~A~~~----~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~ 139 (265)
T d1r7ra3 74 GPELL----------TMWFGESEANVREIFDKARQA----APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMD 139 (265)
T ss_dssp HHHHH----------TSCTTTHHHHHHHHHHHHHHT----CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC
T ss_pred HHHhh----------hccccchHHHHHHHHHHHHhc----CCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhh
Confidence 10100 011112345677777776543 3489999999987421 3456777776
Q ss_pred h--CCCCEEEEEEcCCCCcchHHHHc--cce-EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCC-CHHHHH
Q 036794 550 R--APRRVVFILVSSSLDALPHIIIS--RCQ-KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDG-SLRDAE 623 (1152)
Q Consensus 550 e--pp~~VifILaTN~~dkL~~aL~S--R~q-vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~G-DLR~Ai 623 (1152)
. ...+++||++||.++.+++++++ |+. .|.|++|+.+++.++++..+++.... .+..++.|+..+.| +.+++.
T Consensus 140 ~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-~~~~l~~la~~t~g~s~~di~ 218 (265)
T d1r7ra3 140 GMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLT 218 (265)
T ss_dssp ------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCCHHHHHHHCSSCCHHHH
T ss_pred CcCCCCCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCch-hhhhHHHHHhcCCCCCHHHHH
Confidence 4 23468999999999999999986 677 59999999999999998776543221 11235677777665 556666
Q ss_pred HHHHHHHH
Q 036794 624 MTLEQLSL 631 (1152)
Q Consensus 624 n~LEkLsL 631 (1152)
++++.+..
T Consensus 219 ~lv~~A~~ 226 (265)
T d1r7ra3 219 EICQRACK 226 (265)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 18
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.60 E-value=5.1e-15 Score=158.24 Aligned_cols=196 Identities=15% Similarity=0.168 Sum_probs=137.2
Q ss_pred cccCcHHHHHHHHHHHHh-CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCC
Q 036794 422 DLVGQNLVAQALSNAVMR-RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGP 500 (1152)
Q Consensus 422 dLVGQe~v~q~Lk~aL~~-gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIda 500 (1152)
++||++.+++.+.+.+.. ......+||+||+|||||++|++|+......... ++.++.
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~---------------------~~~~~~ 59 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEP---------------------FVALNV 59 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSC---------------------EEEEET
T ss_pred CeEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhcCCcccc---------------------cccchh
Confidence 579999999988887776 5555668999999999999999999764432111 111111
Q ss_pred CCCCCHHHHHH------------------HHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhC-----------
Q 036794 501 VGNFDFESILD------------------LLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRA----------- 551 (1152)
Q Consensus 501 as~~~vdeIre------------------Lle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEep----------- 551 (1152)
........... +++. ++++++||||+|.|+...|..|+++|++.
T Consensus 60 ~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~-------a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~ 132 (247)
T d1ny5a2 60 ASIPRDIFEAELFGYEKGAFTGAVSSKEGFFEL-------ADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEI 132 (247)
T ss_dssp TTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHH-------TTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBE
T ss_pred hhhhhcccHHHhcCcccCCcCCcccccCCHHHc-------cCCCEEEEeChHhCCHHHHHHHHHHHHhCCEEECCCCCce
Confidence 10000000011 1222 45679999999999999999999999862
Q ss_pred CCCEEEEEEcCCCC-------cchHHHHccce--EEEecCCCh--hHHHHHHHH----HHHHcCC---CCCHHHHHHHHH
Q 036794 552 PRRVVFILVSSSLD-------ALPHIIISRCQ--KFFFPKMKD--ADIIYTLQW----IASKEGI---EIDKDALKLIAS 613 (1152)
Q Consensus 552 p~~VifILaTN~~d-------kL~~aL~SR~q--vI~F~~p~~--~EI~eiL~~----iakkeGl---~Id~dALelLAe 613 (1152)
..++++|++|+..- .+.+.|..|+. .|.+|++.. +++..++.. .+.+.+. .++++|++.|..
T Consensus 133 ~~~~RlI~~s~~~l~~l~~~~~f~~~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~ 212 (247)
T d1ny5a2 133 EVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLS 212 (247)
T ss_dssp ECCCEEEEEESSCHHHHHHTTSSCHHHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHH
T ss_pred ecCeEEEEecCCCHHHHHHcCCCcHHHHhhcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHh
Confidence 13678999887531 36667888866 466666643 456554444 4444444 479999999999
Q ss_pred h-cCCCHHHHHHHHHHHHHh--CCCCCHHHHHHHH
Q 036794 614 R-SDGSLRDAEMTLEQLSLL--GQRISVPLVQELV 645 (1152)
Q Consensus 614 ~-s~GDLR~Ain~LEkLsLl--g~~IT~EdV~elV 645 (1152)
+ |+||++++.+.+++++.. +..|+.+|+..++
T Consensus 213 ~~WPGNl~EL~~~l~~a~~~~~~~~I~~~dl~~l~ 247 (247)
T d1ny5a2 213 YPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV 247 (247)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCSSEECHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCeECHHHccccC
Confidence 9 999999999999998777 4459999988763
No 19
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.53 E-value=2.9e-14 Score=157.30 Aligned_cols=205 Identities=19% Similarity=0.286 Sum_probs=135.4
Q ss_pred ccchhhhhCCCCcCcccCcHHHHHHHHHHHHh--------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCC
Q 036794 408 HQNLTQKYMPRTFRDLVGQNLVAQALSNAVMR--------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCG 479 (1152)
Q Consensus 408 ~~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~--------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg 479 (1152)
...+.+... ..++||+++++.|..++.. .+....+||+||+|+|||.+|+.||+.++.....
T Consensus 13 l~~l~~~L~----~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~------ 82 (315)
T d1r6bx3 13 LKNLGDRLK----MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLR------ 82 (315)
T ss_dssp HHHHHHHHT----TTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEE------
T ss_pred HHHHHHHhC----CeecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeE------
Confidence 444555554 6799999999999988853 1222379999999999999999999998754211
Q ss_pred CCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh---------
Q 036794 480 FCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR--------- 550 (1152)
Q Consensus 480 ~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe--------- 550 (1152)
..|..+....+.....-.+.++.+.+.-..+...+... .+.||++||+|+++++.++.|+++|++
T Consensus 83 --~d~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~~~~----~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr 156 (315)
T d1r6bx3 83 --FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKH----PHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGR 156 (315)
T ss_dssp --EEGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHHHHC----SSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTE
T ss_pred --eccccccchhhhhhhcccCCCccccccCChhhHHHHhC----ccchhhhcccccccchHhhhhHHhhccceecCCCCC
Confidence 11112211111000001122333333323344444443 358999999999999999999999987
Q ss_pred --CCCCEEEEEEcCCC-------------------------CcchHHHHccce-EEEecCCChhHHHHHHHHHHH-----
Q 036794 551 --APRRVVFILVSSSL-------------------------DALPHIIISRCQ-KFFFPKMKDADIIYTLQWIAS----- 597 (1152)
Q Consensus 551 --pp~~VifILaTN~~-------------------------dkL~~aL~SR~q-vI~F~~p~~~EI~eiL~~iak----- 597 (1152)
.-.++++|+++|-- ..+.|.++.|+. ++.|.+++.+++..++...+.
T Consensus 157 ~vdf~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~ 236 (315)
T d1r6bx3 157 KADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ 236 (315)
T ss_dssp EEECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHH
Confidence 33688899998721 126778999998 688999999988877655443
Q ss_pred --HcC--CCCCHHHHHHHHHhc--C-CCHHHHHHHHHH
Q 036794 598 --KEG--IEIDKDALKLIASRS--D-GSLRDAEMTLEQ 628 (1152)
Q Consensus 598 --keG--l~Id~dALelLAe~s--~-GDLR~Ain~LEk 628 (1152)
..+ +.++++|+++|+... . -..|.+.+.+++
T Consensus 237 l~~~~i~l~~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~ 274 (315)
T d1r6bx3 237 LDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 274 (315)
T ss_dssp HHHTTEEEEECHHHHHHHHHHHCBTTTBTTTHHHHHHH
T ss_pred HHhcCcchhhHHHHHHHHHHhCCCCCCChhhHHHHHHH
Confidence 223 458999999999862 1 134555555554
No 20
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.51 E-value=1.2e-14 Score=160.70 Aligned_cols=212 Identities=20% Similarity=0.296 Sum_probs=133.2
Q ss_pred ccccccchhhhhCCCCcCcccCcHHHHHHHHHHHHhC--------CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCC
Q 036794 404 RNGRHQNLTQKYMPRTFRDLVGQNLVAQALSNAVMRR--------KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQP 475 (1152)
Q Consensus 404 ~~~~~~~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~g--------ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~ 475 (1152)
.......+.+..+ ..|+||+++++.+.+++... +....+||+||+|+|||.+|+.||+.+.......
T Consensus 10 ~~~~l~~l~~~L~----~~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~- 84 (315)
T d1qvra3 10 EREKLLRLEEELH----KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM- 84 (315)
T ss_dssp HHHHHHSHHHHHH----HHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGE-
T ss_pred HHHHHHHHHHHhc----CeEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcce-
Confidence 3333444445543 56899999999998888642 1223789999999999999999999985332111
Q ss_pred CCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh-----
Q 036794 476 KPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR----- 550 (1152)
Q Consensus 476 epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe----- 550 (1152)
.+..|..+..........-.+.++.+.+.-..+.+.+...| +.||++||+|+++++.++.|++++++
T Consensus 85 ----~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~~~~p----~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~ 156 (315)
T d1qvra3 85 ----IRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRP----YSVILFDEIEKAHPDVFNILLQILDDGRLTD 156 (315)
T ss_dssp ----EEECTTTCCSSGGGGGC--------------CHHHHHHHCS----SEEEEESSGGGSCHHHHHHHHHHHTTTEECC
T ss_pred ----EEEeccccccchhhhhhcCCCCCCcCcccCChHHHHHHhCC----CcEEEEehHhhcCHHHHHHHHHHhccCceeC
Confidence 01111111111110011111223344333334555555444 58999999999999999999999987
Q ss_pred ------CCCCEEEEEEcCC--------------------------CCcchHHHHccceE-EEecCCChhHHHHHHHHHHH
Q 036794 551 ------APRRVVFILVSSS--------------------------LDALPHIIISRCQK-FFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 551 ------pp~~VifILaTN~--------------------------~dkL~~aL~SR~qv-I~F~~p~~~EI~eiL~~iak 597 (1152)
...+++||++||- .+.+.+.+..|+.. +.|.+++.+++..++...+.
T Consensus 157 ~~gr~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~ 236 (315)
T d1qvra3 157 SHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLS 236 (315)
T ss_dssp SSSCCEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHH
T ss_pred CCCcEecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHH
Confidence 2357889999883 12377789999984 68999999998887765443
Q ss_pred H-------cC--CCCCHHHHHHHHHhc-CC--CHHHHHHHHHH
Q 036794 598 K-------EG--IEIDKDALKLIASRS-DG--SLRDAEMTLEQ 628 (1152)
Q Consensus 598 k-------eG--l~Id~dALelLAe~s-~G--DLR~Ain~LEk 628 (1152)
+ .+ +.++++++++|++.. .- ..|.+...+++
T Consensus 237 ~l~~rl~~~~i~l~i~~~~~~~L~~~~y~~~~GAR~L~r~Ie~ 279 (315)
T d1qvra3 237 YLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQR 279 (315)
T ss_dssp HHHHHHHTTTCEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHH
T ss_pred HHHHHHHhccccccccHHHHHHHHHhCCCCCCCcchHHHHHHH
Confidence 2 33 458999999999872 11 23555555555
No 21
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.44 E-value=5.6e-13 Score=139.17 Aligned_cols=184 Identities=14% Similarity=0.193 Sum_probs=127.1
Q ss_pred CcCccc-C--cHHHHHHHHHHHHhCC-CCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccc
Q 036794 419 TFRDLV-G--QNLVAQALSNAVMRRK-VGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRN 494 (1152)
Q Consensus 419 sFddLV-G--Qe~v~q~Lk~aL~~gr-i~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~d 494 (1152)
+|++++ | ++.+...+.+++.... ....++||||+|+|||++++++++++..... .
T Consensus 8 tFdnF~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~---------------------~ 66 (213)
T d1l8qa2 8 TLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGY---------------------R 66 (213)
T ss_dssp CSSSCCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHTTC---------------------C
T ss_pred ChhhccCCCcHHHHHHHHHHHHhCcCCCCCcEEEECCCCCcHHHHHHHHHHHhccCcc---------------------c
Confidence 799965 5 6677788888776532 2234789999999999999999999764321 0
Q ss_pred eEEeCCCCCC-------CHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCC--HHHHHHHHHHHhh-CCCCEEEEEEcCC-
Q 036794 495 IKEVGPVGNF-------DFESILDLLDNMVTSRPPSQYRIFVFDDCDTLS--PDSWSAISKVVDR-APRRVVFILVSSS- 563 (1152)
Q Consensus 495 viEIdaas~~-------~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls--~eaqnaLLklLEe-pp~~VifILaTN~- 563 (1152)
+..+...... ......++.+.. ....+|+||++|.+. ...+..|..+++. ......+|++++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~ 140 (213)
T d1l8qa2 67 VIYSSADDFAQAMVEHLKKGTINEFRNMY------KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRH 140 (213)
T ss_dssp EEEEEHHHHHHHHHHHHHHTCHHHHHHHH------HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEechHHHHHHHHHHHHccchhhHHHHH------hhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCc
Confidence 2222110000 000011122222 234799999999985 4456677777765 2244556666654
Q ss_pred CC---cchHHHHccce---EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 036794 564 LD---ALPHIIISRCQ---KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIASRSDGSLRDAEMTLEQLSL 631 (1152)
Q Consensus 564 ~d---kL~~aL~SR~q---vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLAe~s~GDLR~Ain~LEkLsL 631 (1152)
|. .+.+.|.+|+. .+.++ |+.+++.++|+..+...|+.++++++++|+.+. .|+|++...|.++.+
T Consensus 141 p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~-~~~R~L~~~l~~l~l 212 (213)
T d1l8qa2 141 PQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLIKL 212 (213)
T ss_dssp GGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-SSHHHHHHHHHHHHH
T ss_pred chhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhc-CcHHHHHHHHHHhhc
Confidence 32 35677999876 67775 577889999999999999999999999999997 689999999998764
No 22
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.42 E-value=2.2e-12 Score=141.97 Aligned_cols=228 Identities=15% Similarity=0.178 Sum_probs=131.2
Q ss_pred CcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHc-------ccCCCCCCCCCCCCccccccCCC
Q 036794 419 TFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALN-------CQSLEQPKPCGFCNSCISHDRGK 491 (1152)
Q Consensus 419 sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~-------~~~~e~~epcg~c~~c~~i~~g~ 491 (1152)
-|.+|+||+.++..|.-++..... |++||+||||||||++|+.++..|. +..... +...|..+.......
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~~~-h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 81 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDPGI-GGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSP--NVEMIPDWATVLSTN 81 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCGGG-CCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCS--SGGGSCTTCCCSCCC
T ss_pred ChhhccCcHHHHHHHHHHHhccCC-CeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccC--ccccccchhhccccC
Confidence 599999999999987765542222 4589999999999999999998762 211110 001111111110000
Q ss_pred ----ccceEEeCCCCCCCHHHH------HHHHHHHhhCCCC-----CCceEEEEeCCCCCCHHHHHHHHHHHhhC-----
Q 036794 492 ----SRNIKEVGPVGNFDFESI------LDLLDNMVTSRPP-----SQYRIFVFDDCDTLSPDSWSAISKVVDRA----- 551 (1152)
Q Consensus 492 ----~~dviEIdaas~~~vdeI------reLle~a~~~P~~-----a~~kVVIIDEID~Ls~eaqnaLLklLEep----- 551 (1152)
...+..... ....+.+ ...+..-...+.. +.++|+||||++.+++..+++|+..||+.
T Consensus 82 ~~~~~~~~~~~~~--~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~~~v~i~ 159 (333)
T d1g8pa_ 82 VIRKPTPVVDLPL--GVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVE 159 (333)
T ss_dssp EEEECCCEEEECT--TCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHHSEEEEC
T ss_pred cccccCceeeccC--CCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcCCeEEec
Confidence 011111111 1111111 1111111111111 34689999999999999999999999972
Q ss_pred --------CCCEEEEEEcCCC-CcchHHHHccceE-EEecCCChh-HHHHHHHH--------------------------
Q 036794 552 --------PRRVVFILVSSSL-DALPHIIISRCQK-FFFPKMKDA-DIIYTLQW-------------------------- 594 (1152)
Q Consensus 552 --------p~~VifILaTN~~-dkL~~aL~SR~qv-I~F~~p~~~-EI~eiL~~-------------------------- 594 (1152)
|.++.+|+++|-. ..+++++++|+.. +.+..+... +....+..
T Consensus 160 r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T d1g8pa_ 160 RDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQI 239 (333)
T ss_dssp CTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHH
Confidence 3556666666643 4799999999984 666655432 11111110
Q ss_pred ---HHHHcCCCCCHHHHHHHHHh---cCC-CHHHHHHHHHHH---HHhC--CCCCHHHHHHHHhccchh
Q 036794 595 ---IASKEGIEIDKDALKLIASR---SDG-SLRDAEMTLEQL---SLLG--QRISVPLVQELVGLISDE 651 (1152)
Q Consensus 595 ---iakkeGl~Id~dALelLAe~---s~G-DLR~Ain~LEkL---sLlg--~~IT~EdV~elVg~v~ee 651 (1152)
...-..+.++++....++.. .+. ++|....++.-+ +.+. ..|+.+||.+++..+...
T Consensus 240 ~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~V~~~di~~a~~lvL~h 308 (333)
T d1g8pa_ 240 LEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSH 308 (333)
T ss_dssp HHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHHHGG
T ss_pred HHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHh
Confidence 00112456777776666555 223 678777666443 3443 359999999977655443
No 23
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.40 E-value=9.5e-13 Score=140.28 Aligned_cols=183 Identities=17% Similarity=0.227 Sum_probs=110.9
Q ss_pred cCcccCcHHHHHHHHH-------HHHhCC--CCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCC
Q 036794 420 FRDLVGQNLVAQALSN-------AVMRRK--VGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRG 490 (1152)
Q Consensus 420 FddLVGQe~v~q~Lk~-------aL~~gr--i~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g 490 (1152)
...|||+...++.+.. .++.+. ....+|||||||||||++|+++|++++....... |.....+
T Consensus 8 ~~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~--------~~~~~~g 79 (246)
T d1d2na_ 8 MNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKIC--------SPDKMIG 79 (246)
T ss_dssp TTCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEE--------CGGGCTT
T ss_pred ccCCcCcCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccc--------ccccccc
Confidence 4568886544433332 223332 3357999999999999999999999886522110 0000000
Q ss_pred CccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCC----------HHHHHHHHHHHhhCC---CCEEE
Q 036794 491 KSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLS----------PDSWSAISKVVDRAP---RRVVF 557 (1152)
Q Consensus 491 ~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls----------~eaqnaLLklLEepp---~~Vif 557 (1152)
. ........++++++.+... .+.||||||+|.+. ....+.|+..++... .+++|
T Consensus 80 ~---------~~~~~~~~i~~if~~A~~~----~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~v 146 (246)
T d1d2na_ 80 F---------SETAKCQAMKKIFDDAYKS----QLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLI 146 (246)
T ss_dssp C---------CHHHHHHHHHHHHHHHHTS----SEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEE
T ss_pred c---------cccchhhhhhhhhhhhhhc----ccceeehhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceee
Confidence 0 0011134577788877543 35799999998752 334567888887643 35888
Q ss_pred EEEcCCCCcchHH-HHccce-EEEecCCChh-HHHHHHHHHHHHcCCCCCHHHHHHHHHhcCC-----CHHHHHHHHHH
Q 036794 558 ILVSSSLDALPHI-IISRCQ-KFFFPKMKDA-DIIYTLQWIASKEGIEIDKDALKLIASRSDG-----SLRDAEMTLEQ 628 (1152)
Q Consensus 558 ILaTN~~dkL~~a-L~SR~q-vI~F~~p~~~-EI~eiL~~iakkeGl~Id~dALelLAe~s~G-----DLR~Ain~LEk 628 (1152)
|++||.++.+++. +.+|+. .|.|+.+... ++...+. .. ..+++..+..++..+.| .++.+++.++.
T Consensus 147 i~tTn~~~~ld~~~~~~rF~~~i~~P~~~~r~~il~~l~----~~-~~~~~~~~~~i~~~~~g~~~~~~ik~ll~~ie~ 220 (246)
T d1d2na_ 147 IGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALE----LL-GNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEM 220 (246)
T ss_dssp EEEESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHH----HH-TCSCHHHHHHHHHHHTTSEEEECHHHHHHHHHH
T ss_pred eeccCChhhccchhhcCccceEEecCCchhHHHHHHHHH----hc-cCCChHHHHHHHHHcCCCccchhHHHHHHHHHH
Confidence 9999999888764 667776 4777555432 3333332 22 24667777777777655 35555555443
No 24
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.40 E-value=4.1e-13 Score=147.44 Aligned_cols=156 Identities=22% Similarity=0.222 Sum_probs=102.4
Q ss_pred cccCcHHHHHHHHHHHHh-------------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCcccccc
Q 036794 422 DLVGQNLVAQALSNAVMR-------------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHD 488 (1152)
Q Consensus 422 dLVGQe~v~q~Lk~aL~~-------------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~ 488 (1152)
.|+||+++++.|..++.. ...+.++||+||||||||++|+++|+.++... ..++
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~-------------~~i~ 81 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPF-------------IKVE 81 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCE-------------EEEE
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccch-------------hccc
Confidence 378999999999988832 12446799999999999999999999986432 1222
Q ss_pred CCCccceEEeCCCCCCCHHHHHHHHHHHhhCCC-CCCceEEEEeCCCCCCHH------------HHHHHHHHHhh-----
Q 036794 489 RGKSRNIKEVGPVGNFDFESILDLLDNMVTSRP-PSQYRIFVFDDCDTLSPD------------SWSAISKVVDR----- 550 (1152)
Q Consensus 489 ~g~~~dviEIdaas~~~vdeIreLle~a~~~P~-~a~~kVVIIDEID~Ls~e------------aqnaLLklLEe----- 550 (1152)
.+...+...+ .......++.++..+..... ...+.||||||+|.+.+. .++.||..++.
T Consensus 82 ~s~~~~~~~~---~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~ 158 (309)
T d1ofha_ 82 ATKFTEVGYV---GKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST 158 (309)
T ss_dssp GGGGSSCCSG---GGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEE
T ss_pred ccccccceeE---eeeccccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEec
Confidence 2222111111 11112335555544321100 012479999999998642 46678888875
Q ss_pred -----CCCCEEEEEE----cCCCCcchHHHHccceE-EEecCCChhHHHHHHH
Q 036794 551 -----APRRVVFILV----SSSLDALPHIIISRCQK-FFFPKMKDADIIYTLQ 593 (1152)
Q Consensus 551 -----pp~~VifILa----TN~~dkL~~aL~SR~qv-I~F~~p~~~EI~eiL~ 593 (1152)
...++.||++ ++.+..+.++++.|+.. +.|++|+..++.+++.
T Consensus 159 ~~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~ 211 (309)
T d1ofha_ 159 KHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILT 211 (309)
T ss_dssp TTEEEECTTCEEEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred CCeEEEccceeEEeccchhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHH
Confidence 1234667665 35667789999999974 8899999998888753
No 25
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.39 E-value=3.4e-12 Score=137.88 Aligned_cols=216 Identities=15% Similarity=0.142 Sum_probs=153.2
Q ss_pred hhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCC
Q 036794 411 LTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRG 490 (1152)
Q Consensus 411 l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g 490 (1152)
|.++-+-..++.++|.+..+..|...+.+.... .+||.||||+|||++++.+|+.+.....+.. .
T Consensus 8 lt~~a~~~~ld~~igRd~Ei~~l~~iL~r~~k~-n~lLVG~~GvGKTalv~~la~ri~~~~vp~~--------------l 72 (268)
T d1r6bx2 8 LNQLARVGGIDPLIGREKELERAIQVLCRRRKN-NPLLVGESGVGKTAIAEGLAWRIVQGDVPEV--------------M 72 (268)
T ss_dssp HHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSC-EEEEECCTTSSHHHHHHHHHHHHHHTCSCGG--------------G
T ss_pred HHHHHHcCCCCcccChHHHHHHHHHHHhcCccC-CcEEECCCCCcHHHHHHHHHHHHHhCCcccc--------------c
Confidence 444444456788999999999999999776655 4789999999999999999998765432211 1
Q ss_pred CccceEEeCCC------CC-CCHH-HHHHHHHHHhhCCCCCCceEEEEeCCCCCC---------HHHHHHHHHHHhhCCC
Q 036794 491 KSRNIKEVGPV------GN-FDFE-SILDLLDNMVTSRPPSQYRIFVFDDCDTLS---------PDSWSAISKVVDRAPR 553 (1152)
Q Consensus 491 ~~~dviEIdaa------s~-~~vd-eIreLle~a~~~P~~a~~kVVIIDEID~Ls---------~eaqnaLLklLEepp~ 553 (1152)
....+++++.. .. ..++ .+..+++.+.. .+..|+||||+|.+. .++.+.|..+|.. .
T Consensus 73 ~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~~----~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r--g 146 (268)
T d1r6bx2 73 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ----DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS--G 146 (268)
T ss_dssp TTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHSS----SSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS--C
T ss_pred ccceeEEeeechHhccCccchhHHHHHHHHHHHhhc----cCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC--C
Confidence 11224444422 11 2233 36667777642 344789999999983 2345566667764 6
Q ss_pred CEEEEEEcCCC-----CcchHHHHccceEEEecCCChhHHHHHHHHHH----HHcCCCCCHHHHHHHHHhc------CCC
Q 036794 554 RVVFILVSSSL-----DALPHIIISRCQKFFFPKMKDADIIYTLQWIA----SKEGIEIDKDALKLIASRS------DGS 618 (1152)
Q Consensus 554 ~VifILaTN~~-----dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~ia----kkeGl~Id~dALelLAe~s------~GD 618 (1152)
.+.+|++|+.. -.-.++|.+||++|.+.+|+.++...+|.... ...++.++++++..++..+ ..-
T Consensus 147 ~i~vIgatT~eey~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~ 226 (268)
T d1r6bx2 147 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 226 (268)
T ss_dssp CCEEEEEECHHHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCT
T ss_pred CCeEEEeCCHHHHHHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCC
Confidence 88899988732 23567799999999999999999998887654 3468999999998887763 235
Q ss_pred HHHHHHHHHHHHHh---------CCCCCHHHHHHHHhc
Q 036794 619 LRDAEMTLEQLSLL---------GQRISVPLVQELVGL 647 (1152)
Q Consensus 619 LR~Ain~LEkLsLl---------g~~IT~EdV~elVg~ 647 (1152)
+..++..|+.++.. ...|+.+||+.++..
T Consensus 227 PdKAIdllDea~a~~~~~~~~~~~~~i~~~di~~~i~~ 264 (268)
T d1r6bx2 227 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVAR 264 (268)
T ss_dssp THHHHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhhccccCcccCCHHHHHHHHHH
Confidence 77899999987543 123788888777654
No 26
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.35 E-value=2.6e-12 Score=144.31 Aligned_cols=192 Identities=20% Similarity=0.192 Sum_probs=120.8
Q ss_pred cccCcHHHHHHHHHHHHh-----------------------------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCC
Q 036794 422 DLVGQNLVAQALSNAVMR-----------------------------RKVGLLYVFYGPHGTGKTSCARIFARALNCQSL 472 (1152)
Q Consensus 422 dLVGQe~v~q~Lk~aL~~-----------------------------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~ 472 (1152)
.||||+++++.+..++.. ...+..+||.||+|+|||.+|++||+.++...
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~- 96 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPI- 96 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCE-
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhcccce-
Confidence 489999999999887731 33455799999999999999999999864331
Q ss_pred CCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCC--------------CCH
Q 036794 473 EQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDT--------------LSP 538 (1152)
Q Consensus 473 e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~--------------Ls~ 538 (1152)
..+++..+....++ +.---..+.+++......-...++++|++||++. ..+
T Consensus 97 ------------ir~D~s~~~e~gyv---g~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~ 161 (364)
T d1um8a_ 97 ------------AISDATSLTEAGYV---GEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGE 161 (364)
T ss_dssp ------------EEEEGGGCC-----------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CH
T ss_pred ------------eehhhhhcccchhh---HhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccch
Confidence 11222222222221 1111234555554431111123568999999999 556
Q ss_pred HHHHHHHHHHhhC-------------CCCEEEEEEcCC------------------------------------------
Q 036794 539 DSWSAISKVVDRA-------------PRRVVFILVSSS------------------------------------------ 563 (1152)
Q Consensus 539 eaqnaLLklLEep-------------p~~VifILaTN~------------------------------------------ 563 (1152)
..++.||++|+.. ..+.++|.++|-
T Consensus 162 ~V~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (364)
T d1um8a_ 162 GVQQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHL 241 (364)
T ss_dssp HHHHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGG
T ss_pred HHHHhhhhhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhcc
Confidence 7899999999951 123334333321
Q ss_pred -------CCcchHHHHccce-EEEecCCChhHHHHHHHH-----------HHHHcCC--CCCHHHHHHHHHh---cCCCH
Q 036794 564 -------LDALPHIIISRCQ-KFFFPKMKDADIIYTLQW-----------IASKEGI--EIDKDALKLIASR---SDGSL 619 (1152)
Q Consensus 564 -------~dkL~~aL~SR~q-vI~F~~p~~~EI~eiL~~-----------iakkeGl--~Id~dALelLAe~---s~GDL 619 (1152)
...+.|.++.|+. ++.|.+++.+++.+++.. .+..+|+ .++++|+++|+.. -.-..
T Consensus 242 ~~~~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~GA 321 (364)
T d1um8a_ 242 VQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGA 321 (364)
T ss_dssp CCHHHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTG
T ss_pred ccHHHHhhhhhHHHHHHHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCCCCCc
Confidence 0015677999998 488999999999888752 2334566 4789999999997 22346
Q ss_pred HHHHHHHHHH
Q 036794 620 RDAEMTLEQL 629 (1152)
Q Consensus 620 R~Ain~LEkL 629 (1152)
|.+..+++++
T Consensus 322 R~L~riie~~ 331 (364)
T d1um8a_ 322 RGLRAIIEDF 331 (364)
T ss_dssp GGHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 6666666664
No 27
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.19 E-value=1.3e-10 Score=131.27 Aligned_cols=202 Identities=17% Similarity=0.190 Sum_probs=136.0
Q ss_pred hhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCC
Q 036794 411 LTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRG 490 (1152)
Q Consensus 411 l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g 490 (1152)
|+++-+-..++.++|.+..++.+...+.+...++ .||.||||+|||++++.||..+.....+.. -
T Consensus 12 l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n-~llvG~~GvGKtaiv~~la~~i~~~~vp~~--------------l 76 (387)
T d1qvra2 12 LTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNN-PVLIGEPGVGKTAIVEGLAQRIVKGDVPEG--------------L 76 (387)
T ss_dssp HHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCC-CEEEECTTSCHHHHHHHHHHHHHHTCSCTT--------------S
T ss_pred HHHHHHcCCCCCCcCcHHHHHHHHHHHhcCCCCC-CeEECCCCCCHHHHHHHHHHHHHhCCCCHH--------------H
Confidence 3344444568889999999999999998766655 478899999999999999998765543221 0
Q ss_pred CccceEEeCCCC------C-CCH-HHHHHHHHHHhhCCCCCCceEEEEeCCCCCC--------HHHHHHHHHHHhhCCCC
Q 036794 491 KSRNIKEVGPVG------N-FDF-ESILDLLDNMVTSRPPSQYRIFVFDDCDTLS--------PDSWSAISKVVDRAPRR 554 (1152)
Q Consensus 491 ~~~dviEIdaas------~-~~v-deIreLle~a~~~P~~a~~kVVIIDEID~Ls--------~eaqnaLLklLEepp~~ 554 (1152)
....++.++... + ..+ ..+..++..+... ...-|+||||+|.+. .++.+.|..+|.. ..
T Consensus 77 ~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~---~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r--g~ 151 (387)
T d1qvra2 77 KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQS---QGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GE 151 (387)
T ss_dssp TTCEEEEECC-----------CHHHHHHHHHHHHHTT---CSSEEEEECCC-------------------HHHHHT--TC
T ss_pred cCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccC---CCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC--CC
Confidence 112245554321 1 123 2355666665432 224579999999983 2456788889987 67
Q ss_pred EEEEEEcCCCC----cchHHHHccceEEEecCCChhHHHHHHHHHHH----HcCCCCCHHHHHHHHHhc------CCCHH
Q 036794 555 VVFILVSSSLD----ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS----KEGIEIDKDALKLIASRS------DGSLR 620 (1152)
Q Consensus 555 VifILaTN~~d----kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak----keGl~Id~dALelLAe~s------~GDLR 620 (1152)
+.+|++|+..+ .-+++|.+||+.|.+.+|+.++...+|+.+.. ..++.|+++|+..++..+ ..-+.
T Consensus 152 ~~~I~~tT~~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~Pd 231 (387)
T d1qvra2 152 LRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPD 231 (387)
T ss_dssp CCEEEEECHHHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHH
T ss_pred cceeeecCHHHHHHhcccHHHHHhcccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChh
Confidence 88888886211 12567999999999999999999998887664 458999999999888763 24677
Q ss_pred HHHHHHHHHHHh
Q 036794 621 DAEMTLEQLSLL 632 (1152)
Q Consensus 621 ~Ain~LEkLsLl 632 (1152)
.|+.+|+.++..
T Consensus 232 KAidlld~a~a~ 243 (387)
T d1qvra2 232 KAIDLIDEAAAR 243 (387)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 899999987544
No 28
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.04 E-value=1.9e-10 Score=118.52 Aligned_cols=163 Identities=18% Similarity=0.233 Sum_probs=115.4
Q ss_pred chhhhhCCCCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccC
Q 036794 410 NLTQKYMPRTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDR 489 (1152)
Q Consensus 410 ~l~eKyRP~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~ 489 (1152)
.+.++.+...++.++|++..++.+...+.+....+ +||.||||+|||++++.+|+.+.....+. .
T Consensus 11 dlt~~a~~g~ld~~igRd~Ei~~l~~iL~r~~k~n-~lLvG~pGVGKTalv~~LA~ri~~~~vp~--------------~ 75 (195)
T d1jbka_ 11 DLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNN-PVLIGEPGVGKTAIVEGLAQRIINGEVPE--------------G 75 (195)
T ss_dssp EHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCE-EEEECCTTSCHHHHHHHHHHHHHHTCSCG--------------G
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHHHhccCCCC-eEEEecCCcccHHHHHHHHHHHHhCCCCH--------------H
Confidence 44555555678899999999999999988766554 78999999999999999999886543221 1
Q ss_pred CCccceEEeCCC----CCCC---HH-HHHHHHHHHhhCCCCCCceEEEEeCCCCCCH--------HHHHHHHHHHhhCCC
Q 036794 490 GKSRNIKEVGPV----GNFD---FE-SILDLLDNMVTSRPPSQYRIFVFDDCDTLSP--------DSWSAISKVVDRAPR 553 (1152)
Q Consensus 490 g~~~dviEIdaa----s~~~---vd-eIreLle~a~~~P~~a~~kVVIIDEID~Ls~--------eaqnaLLklLEepp~ 553 (1152)
-....+++++.. +... ++ .+..+++.+... ...-|+||||+|.+.. ++.+.|..+|+. .
T Consensus 76 L~~~~i~~ld~~~LiAg~~~rG~~E~rl~~il~e~~~~---~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r--g 150 (195)
T d1jbka_ 76 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ---EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR--G 150 (195)
T ss_dssp GTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHS---TTTEEEEEETGGGGTT------CCCCHHHHHHHHHT--T
T ss_pred HcCceEEEeeHHHHhccCCccHHHHHHHHHHHHHHhcC---CCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhC--C
Confidence 112336666632 2222 22 355566665322 2346899999999842 245788888986 6
Q ss_pred CEEEEEEcCCCC-----cchHHHHccceEEEecCCChhHHHHHH
Q 036794 554 RVVFILVSSSLD-----ALPHIIISRCQKFFFPKMKDADIIYTL 592 (1152)
Q Consensus 554 ~VifILaTN~~d-----kL~~aL~SR~qvI~F~~p~~~EI~eiL 592 (1152)
.+.+|++|+..+ .-.++|.+||+.|.+..|+.++...+|
T Consensus 151 ~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 151 ELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp SCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred CceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 788888887322 346789999999999999988876544
No 29
>d1jr3d1 a.80.1.1 (D:212-338) delta subunit {Escherichia coli [TaxId: 562]}
Probab=99.03 E-value=1.5e-10 Score=109.71 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHH------------hCCC
Q 036794 651 EKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFR------------RQPL 718 (1152)
Q Consensus 651 e~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~------------r~~l 718 (1152)
+++|+|+|+++.+|..+|+.+++.|..+|++|+.|++.|.++|+.|+.++.... +.....++. .+++
T Consensus 1 f~~F~L~dai~~gd~~~a~~il~~l~~~g~~~~~il~~l~~~~~~l~~i~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~ 79 (127)
T d1jr3d1 1 FTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSA-HTPLRALFDKHRVWQNRRGMMGEAL 79 (127)
T ss_dssp CCHHHHHHHHTTSCHHHHHHHHTSSTTTTCCHHHHHHHHHHHHHHHHHHHTCSS-SSCHHHHHHHHTCCSSHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHhhc-cCCHHHHHHHcCCCHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999875432 333332222 2345
Q ss_pred CcccHHHHHHHHHHHHHHHHHhcc--CCCHHHHHHHHHHHcCC
Q 036794 719 SKEEMEKLRQALKTLSEAEKQLRM--SNDKLTWLTAALLQLAP 759 (1152)
Q Consensus 719 s~~s~~kL~qaL~~L~eaD~qLK~--s~dprl~LE~lLLkLa~ 759 (1152)
++|+..+|.+++..|.++|..+|+ +.++++.||.++++||.
T Consensus 80 ~~~s~~~l~~~l~~l~~~D~~~K~~~~~~~~~~le~l~l~lc~ 122 (127)
T d1jr3d1 80 NRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCH 122 (127)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHTTS
T ss_pred HhCCHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC
Confidence 699999999999999999999997 45899999999999995
No 30
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.86 E-value=2.1e-09 Score=118.44 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=77.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCC
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQ 524 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~ 524 (1152)
.+|||||||||||.+|+++|.+++...... .+..+.. + ..........++++++.+...
T Consensus 125 ~~l~~G~pG~GKT~la~ala~~~~~~~~~~-----------~~~~~~~---~--~~~~G~~e~~~~~~f~~a~~~----- 183 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLVHALGEALGGKDKYA-----------TVRFGEP---L--SGYNTDFNVFVDDIARAMLQH----- 183 (321)
T ss_dssp EEEEECSSSSCHHHHHHHHHHHHHTTSCCE-----------EEEBSCS---S--TTCBCCHHHHHHHHHHHHHHC-----
T ss_pred eEEEECCCCccHHHHHHHHHHHhcCCCCeE-----------EEEhhHh---h--hcccchHHHHHHHHHHHHhhc-----
Confidence 466799999999999999999987542111 1111110 0 111112346789999988642
Q ss_pred ceEEEEeCCCCCCHH------------HHHHHHHHHhh--CCCCEEEEEEcCCCCcchHHHH------ccce-EEEecCC
Q 036794 525 YRIFVFDDCDTLSPD------------SWSAISKVVDR--APRRVVFILVSSSLDALPHIII------SRCQ-KFFFPKM 583 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~e------------aqnaLLklLEe--pp~~VifILaTN~~dkL~~aL~------SR~q-vI~F~~p 583 (1152)
.||||||+|.+... ..+.||.-|+. ...+++||++||. ..++++|. .|+. .+.+..|
T Consensus 184 -~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~-~~~~~~i~~~~~r~~Rf~~~v~v~~p 261 (321)
T d1w44a_ 184 -RVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNP-TSNDDKIVELVKEASRSNSTSLVIST 261 (321)
T ss_dssp -SEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCC-CCCCHHHHHHHHHHHHHSCSEEEEEC
T ss_pred -cEEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCC-cccccchhhhhhccCcccceeecCCC
Confidence 59999999998432 34566666653 3357888888884 33444332 2333 4666777
Q ss_pred ChhHHHHHHH
Q 036794 584 KDADIIYTLQ 593 (1152)
Q Consensus 584 ~~~EI~eiL~ 593 (1152)
+.++...+|.
T Consensus 262 d~~~r~~il~ 271 (321)
T d1w44a_ 262 DVDGEWQVLT 271 (321)
T ss_dssp SSTTEEEEEE
T ss_pred ChHHHHHHHH
Confidence 7665544443
No 31
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=98.82 E-value=2.6e-09 Score=119.60 Aligned_cols=173 Identities=14% Similarity=0.066 Sum_probs=93.0
Q ss_pred ccCcHHHH-HHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCC
Q 036794 423 LVGQNLVA-QALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPV 501 (1152)
Q Consensus 423 LVGQe~v~-q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaa 501 (1152)
+.|.+..+ ..|+..+..-....++|||||||||||++|+++|+.+++.....+ ..
T Consensus 133 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in------------------------~s 188 (362)
T d1svma_ 133 LPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVN------------------------LP 188 (362)
T ss_dssp STTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCS------------------------SC
T ss_pred ccchHHHHHHHHHHHHhCCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEE------------------------Cc
Confidence 44555444 334444443344468999999999999999999999987643322 11
Q ss_pred CCCCHHHHHHHH-------HHHhh--CCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhC--------CC------CEEEE
Q 036794 502 GNFDFESILDLL-------DNMVT--SRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRA--------PR------RVVFI 558 (1152)
Q Consensus 502 s~~~vdeIreLl-------e~a~~--~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEep--------p~------~VifI 558 (1152)
...+...++... +.+.. ........++++||+|.| ...++.. .. ...+|
T Consensus 189 ~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~DeiD~l--------~~~~dg~~~~~~~~~~~~~~~~~~~p~i 260 (362)
T d1svma_ 189 LDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNL--------RDYLDGSVKVNLEKKHLNKRTQIFPPGI 260 (362)
T ss_dssp TTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHHHTT--------HHHHHCSSCEEECCSSSCCEEECCCCEE
T ss_pred chhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehHhhc--------ccccCCcchhhhhhhhhchhhhccCCce
Confidence 100000000000 00000 000112234555555543 3333321 01 11378
Q ss_pred EEcCCCCcchHHHHccce--EEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHHHH-HhcCCCHHHHHHHHHH
Q 036794 559 LVSSSLDALPHIIISRCQ--KFFFPKMKDADIIYTLQWIASKEGIEIDKDALKLIA-SRSDGSLRDAEMTLEQ 628 (1152)
Q Consensus 559 LaTN~~dkL~~aL~SR~q--vI~F~~p~~~EI~eiL~~iakkeGl~Id~dALelLA-e~s~GDLR~Ain~LEk 628 (1152)
++||+.+ .+....-|+. ++.+.++.......++..+++.+.+.++.+++..+. ..+++|++.+++.+..
T Consensus 261 ~ttN~~~-~~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~~~~l~~~~~~L~~li~~~s~~D~~~~i~~~~~ 332 (362)
T d1svma_ 261 VTMNEYS-VPKTLQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQSGIALLLMLIWYRPVAEFAQSIQSRIV 332 (362)
T ss_dssp EEECSCC-CCHHHHTTEEEEEECCCCHHHHHHHHTCTHHHHTTCTTCHHHHHHHHHHHSCGGGSCGGGHHHHH
T ss_pred eeccccc-ccccccccCceEEeecCCCcHHHHHHHHHHHhcccCCCCCHHHHHHHccCCCHHHHHHHHHHHHH
Confidence 8888765 2222333544 344444445556677888889999998888876654 4466688877766543
No 32
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.81 E-value=3.7e-08 Score=101.64 Aligned_cols=195 Identities=15% Similarity=0.124 Sum_probs=113.9
Q ss_pred CcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccC---------
Q 036794 419 TFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDR--------- 489 (1152)
Q Consensus 419 sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~--------- 489 (1152)
.-++++|.+..+++|.+. ....++|+||+|+|||++++.+++.+++...... |..+.....
T Consensus 10 ~~~~f~GR~~el~~l~~~-----~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~~~ 79 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL-----RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLD-----LRKFEERNYISYKDFLLE 79 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT-----CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEE-----GGGGTTCSCCCHHHHHHH
T ss_pred ChhhCCChHHHHHHHHhc-----cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEE-----eccccccccccHHHHHHH
Confidence 457899999998888753 3457899999999999999999988764321100 000000000
Q ss_pred -------------------CCccceE------EeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHH----
Q 036794 490 -------------------GKSRNIK------EVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDS---- 540 (1152)
Q Consensus 490 -------------------g~~~dvi------EIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~ea---- 540 (1152)
....... .... .......+.++++.+... ..+..++++||++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~--~~~~~~i~id~~~~~~~~~~~~~ 156 (283)
T d2fnaa2 80 LQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNW-NRKDRLSFANLLESFEQA--SKDNVIIVLDEAQELVKLRGVNL 156 (283)
T ss_dssp HHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC------CCCHHHHHHHHHHT--CSSCEEEEEETGGGGGGCTTCCC
T ss_pred HHHHhhhhhhhhHHHHHHHHhhhccccccccccccc-chhhhhHHHHHHHHHHhh--cccccccccchhhhhcccchHHH
Confidence 0000000 0000 011112234444443322 2445789999998874432
Q ss_pred HHHHHHHHhhCCCCEEEEEEcCCCCcchH---------H-HHccceEEEecCCChhHHHHHHHHHHHHcCCCCCHHHHHH
Q 036794 541 WSAISKVVDRAPRRVVFILVSSSLDALPH---------I-IISRCQKFFFPKMKDADIIYTLQWIASKEGIEIDKDALKL 610 (1152)
Q Consensus 541 qnaLLklLEepp~~VifILaTN~~dkL~~---------a-L~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~Id~dALel 610 (1152)
...|...+.. ...+.+|+++.....+.. . ...+...+.+.+++.+++.+++...+...+++.+ .++.
T Consensus 157 ~~~l~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~--~~~~ 233 (283)
T d2fnaa2 157 LPALAYAYDN-LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFK--DYEV 233 (283)
T ss_dssp HHHHHHHHHH-CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCC--CHHH
T ss_pred HHHHHHHHHh-hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCHH--HHHH
Confidence 3344444444 356667776554321111 1 1223457889999999999999999888776554 4778
Q ss_pred HHHhcCCCHHHHHHHHHHH
Q 036794 611 IASRSDGSLRDAEMTLEQL 629 (1152)
Q Consensus 611 LAe~s~GDLR~Ain~LEkL 629 (1152)
+.+.++|.+..+.-....+
T Consensus 234 i~~~~~G~P~~L~~~~~~~ 252 (283)
T d2fnaa2 234 VYEKIGGIPGWLTYFGFIY 252 (283)
T ss_dssp HHHHHCSCHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHH
Confidence 9999999997654443333
No 33
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=98.74 E-value=1.6e-08 Score=96.06 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=91.9
Q ss_pred cchhhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhchhhhhcch----hHHHHHHhCCCCcccH
Q 036794 648 ISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKDR----HRRKFFRRQPLSKEEM 723 (1152)
Q Consensus 648 v~ee~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~----~~~~~~~r~~ls~~s~ 723 (1152)
+..+.+|+|+++++.+|...+++.++++.+.|.||..++..|+.++|+++..+....... .....+.. .+.+++.
T Consensus 2 vD~~~~~~L~~~I~~~d~~~~L~~l~~i~~~G~d~~~~l~~L~~~~r~l~~~k~~~~~~~~~~~~~~~~~~~-~a~~~~~ 80 (126)
T d1jr3a1 2 LDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRE-LARTIPP 80 (126)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCTTCCCSGGGGTHHHHHH-HHHHSCH
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHH-HHHcCCH
Confidence 457889999999999999999999999999999999999999999999988764432211 01111111 2347999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHcC
Q 036794 724 EKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLA 758 (1152)
Q Consensus 724 ~kL~qaL~~L~eaD~qLK~s~dprl~LE~lLLkLa 758 (1152)
+.|.++++.|.++..++|++.+|+++||++++++.
T Consensus 81 ~~L~~~~~il~~~~~~ik~s~~~r~~~Em~llrll 115 (126)
T d1jr3a1 81 TDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRAL 115 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999965
No 34
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.60 E-value=2.9e-07 Score=105.20 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=83.1
Q ss_pred eEEEEeCCCCCC------------HHHHHHHHHHHhh----------CCCCEEEEEEcCC----CCcchHHHHccce-EE
Q 036794 526 RIFVFDDCDTLS------------PDSWSAISKVVDR----------APRRVVFILVSSS----LDALPHIIISRCQ-KF 578 (1152)
Q Consensus 526 kVVIIDEID~Ls------------~eaqnaLLklLEe----------pp~~VifILaTN~----~dkL~~aL~SR~q-vI 578 (1152)
.++++||++... ...+..|+..++. ...+..||..+.. +..+.|.|.-|+. ++
T Consensus 251 ~~~~~dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~~~~~~~~~~~l~i~~~~~~~~~~~gliPEliGRlPi~v 330 (443)
T d1g41a_ 251 GIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRV 330 (443)
T ss_dssp CEEEEETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEECCSSCCGGGSCHHHHTTCCEEE
T ss_pred CccccchhhhhhhcccCCCCCcccchhhhhhhhhccccccccccccccccchhhccccchhhcccccchhhhccceEEEE
Confidence 588999998752 2245677777765 2234456555432 2347777999988 48
Q ss_pred EecCCChhHHHHHHHH-----------HHHHcCCC--CCHHHHHHHHHhc-------CC-CHHHHHHHHHHHHH---h-C
Q 036794 579 FFPKMKDADIIYTLQW-----------IASKEGIE--IDKDALKLIASRS-------DG-SLRDAEMTLEQLSL---L-G 633 (1152)
Q Consensus 579 ~F~~p~~~EI~eiL~~-----------iakkeGl~--Id~dALelLAe~s-------~G-DLR~Ain~LEkLsL---l-g 633 (1152)
.|.+++.+++..+|.. .+..+|+. ++++|++.||+.+ .+ ..|.+..++|++.. | .
T Consensus 331 ~L~~L~~~dL~rILtEPknsLikQy~~lf~~~gv~L~ft~~al~~iA~~A~~~n~~~~~~GAR~Lr~i~E~~l~~~~f~~ 410 (443)
T d1g41a_ 331 ELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSA 410 (443)
T ss_dssp ECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHG
T ss_pred EccCccHHHHHHHHHhhhhhHHHHHHHHHhhcCcEEEEcHHHHHHHHHHHHHhhhhcccCCchHHHHHHHHHHHHHhccC
Confidence 8999999999887742 33346765 5899999998884 22 56888888888632 2 1
Q ss_pred -----C--CCCHHHHHHHHhcc
Q 036794 634 -----Q--RISVPLVQELVGLI 648 (1152)
Q Consensus 634 -----~--~IT~EdV~elVg~v 648 (1152)
. .||.+.|.+-+...
T Consensus 411 p~~~~~~v~Id~~~v~~~l~~~ 432 (443)
T d1g41a_ 411 SDMNGQTVNIDAAYVADALGEV 432 (443)
T ss_dssp GGCTTCEEEECHHHHHHHHTTT
T ss_pred CCCCCCEEEECHHHHHhhhhch
Confidence 1 27888887777543
No 35
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.04 E-value=3.5e-05 Score=81.99 Aligned_cols=171 Identities=12% Similarity=0.095 Sum_probs=99.3
Q ss_pred cccCcHHHHHHHHHHHHh--CCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeC
Q 036794 422 DLVGQNLVAQALSNAVMR--RKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVG 499 (1152)
Q Consensus 422 dLVGQe~v~q~Lk~aL~~--gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEId 499 (1152)
+++|.+.-++.+..++.. ......+.|+|..|+|||++|+.+.+......... ..| ++.+.
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~----f~~-------------~~Wv~ 83 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGIN----YDS-------------IVWLK 83 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTT----BSE-------------EEEEE
T ss_pred ceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhc----Cce-------------EEEEE
Confidence 467999999889888865 23345788999999999999999987632211000 000 11111
Q ss_pred CCCCCCHH------------------------------HHHH-HHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHH
Q 036794 500 PVGNFDFE------------------------------SILD-LLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVV 548 (1152)
Q Consensus 500 aas~~~vd------------------------------eIre-Lle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklL 548 (1152)
........ ..+. ++... ...++.++|||++... ..+ +.+
T Consensus 84 vs~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----L~~kr~LlVLDDv~~~--~~~----~~~ 153 (277)
T d2a5yb3 84 DSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNAL----IDRPNTLFVFDDVVQE--ETI----RWA 153 (277)
T ss_dssp CCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHH----TTSTTEEEEEEEECCH--HHH----HHH
T ss_pred ecCCCCHHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHH----hccCCeeEecchhhHH--hhh----hhh
Confidence 01111111 1111 11111 1234578999998752 222 233
Q ss_pred hhCCCCEEEEEEcCCCCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCC-CCCHHHHHHHHHhcCCCHHHH
Q 036794 549 DRAPRRVVFILVSSSLDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGI-EIDKDALKLIASRSDGSLRDA 622 (1152)
Q Consensus 549 Eepp~~VifILaTN~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl-~Id~dALelLAe~s~GDLR~A 622 (1152)
.. ....+|++|.+.. +...+...+..+.+.+++.++..+.+...+..... .-.++..+.|++.++|.+-.+
T Consensus 154 ~~--~~srilvTTR~~~-v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl 225 (277)
T d2a5yb3 154 QE--LRLRCLVTTRDVE-ISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATL 225 (277)
T ss_dssp HH--TTCEEEEEESBGG-GGGGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHH
T ss_pred cc--cCceEEEEeehHH-HHHhcCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHH
Confidence 33 2456777776554 33345556678999999999988888654322211 113556778899999987554
No 36
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.88 E-value=1.8e-05 Score=76.82 Aligned_cols=63 Identities=6% Similarity=0.075 Sum_probs=37.9
Q ss_pred CCceEEEEeCCCCCC---HHHHHHHHHHHhhCCCCEEEEEEcCCC--CcchHHHHcc--ceEEEecCCChhH
Q 036794 523 SQYRIFVFDDCDTLS---PDSWSAISKVVDRAPRRVVFILVSSSL--DALPHIIISR--CQKFFFPKMKDAD 587 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls---~eaqnaLLklLEepp~~VifILaTN~~--dkL~~aL~SR--~qvI~F~~p~~~E 587 (1152)
....++++||++... ......|.++++++ ...+|+++... ..+...+..+ +..+.....+.+.
T Consensus 98 ~~~~vlllDE~~~~~~~~~~~~~~l~~~l~~~--~~~il~~~h~~~~~~~~~~i~~~~~~~i~~v~~~nrd~ 167 (178)
T d1ye8a1 98 DRRKVIIIDEIGKMELFSKKFRDLVRQIMHDP--NVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDV 167 (178)
T ss_dssp CTTCEEEECCCSTTGGGCHHHHHHHHHHHTCT--TSEEEEECCSSCCSHHHHHHHTCTTCEEEECCTTTTTT
T ss_pred cCCCceeecCCCccchhhHHHHHHHHHHhccC--CCEEEEEEccHHHHHhhceEEEEeCCEEEEECCccHHH
Confidence 456899999997763 44567888888764 34455555543 3344445544 3356555544333
No 37
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=97.77 E-value=5.9e-06 Score=85.44 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=38.6
Q ss_pred CcCcccCcHHHHHHHHHHHHh---CCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 419 TFRDLVGQNLVAQALSNAVMR---RKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 419 sFddLVGQe~v~q~Lk~aL~~---gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.|.+.-+++.+.+.|...... ...|.+|||+||||||||++|++||.++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~ 59 (273)
T d1gvnb_ 5 NFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGN 59 (273)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTC
T ss_pred ccChHHHHHHHHHHHHHHHhcccCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence 355555666666555554333 4556789999999999999999999998765
No 38
>d1jqlb_ c.37.1.20 (B:) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.75 E-value=0.00011 Score=70.30 Aligned_cols=125 Identities=9% Similarity=0.020 Sum_probs=90.6
Q ss_pred HHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHH
Q 036794 432 ALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILD 511 (1152)
Q Consensus 432 ~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIre 511 (1152)
.|...+..+ .++.|||||+.-.-+..+...|-+.+...... +..........+ +.+
T Consensus 8 ~L~~~l~k~-l~~vyll~G~E~~L~~~~~~~i~~~~~~~~~~--------------------~~~~~~~~~~~~---~~~ 63 (140)
T d1jqlb_ 8 QLRAQLNEG-LRAAYLLLGNDPLLLQESQDAVRQVAAAQGFE--------------------EHHTFSIDPNTD---WNA 63 (140)
T ss_dssp GHHHHHHHC-CCSEEEEESSCHHHHHHHHHHHHHHHHHTTCC--------------------EEECCCCSTTCC---HHH
T ss_pred HHHHHHhcC-CCcEEEEEcChHHHHHHHHHHHHHHHHhCCcc--------------------eeeeecccccCC---HHH
Confidence 466677765 88999999999999999888887776543211 011111112233 455
Q ss_pred HHHHHhhCCCCCCceEEEEeCCCCCC-HHHHHHHHHHHhhCCCCEEEEEEcCCCC------cchHHHHccceEEEe
Q 036794 512 LLDNMVTSRPPSQYRIFVFDDCDTLS-PDSWSAISKVVDRAPRRVVFILVSSSLD------ALPHIIISRCQKFFF 580 (1152)
Q Consensus 512 Lle~a~~~P~~a~~kVVIIDEID~Ls-~eaqnaLLklLEepp~~VifILaTN~~d------kL~~aL~SR~qvI~F 580 (1152)
+++.+...|+++.+++|+|++..... ....+.|.++++.++.++++|+.++..+ ++..+|...+.+|++
T Consensus 64 l~~~~~t~slF~~krli~i~~~~~~~~k~~~~~L~~~~~~~~~~~~lii~~~~~~k~~~~~k~~K~l~k~g~vI~C 139 (140)
T d1jqlb_ 64 IFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTC 139 (140)
T ss_dssp HHHHHHCCCTTCCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEEEC
T ss_pred HHHHHcCCCcccCcEEEEEEcCCCCCcHHHHHHHHHHHhCCCCCEEEEEEcCCCCchhhhhHHHHHHHhCCeEEeC
Confidence 77777788999999999999987654 5667889999999999999999887544 356677777777765
No 39
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.57 E-value=9.7e-05 Score=75.64 Aligned_cols=120 Identities=20% Similarity=0.244 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHH
Q 036794 428 LVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFE 507 (1152)
Q Consensus 428 ~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vd 507 (1152)
..+..|+.+++.....++++|+||++||||++|.+|.+.+....... . +..+++...
T Consensus 38 ~Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vis~-------------~----------N~~s~F~Lq 94 (205)
T d1tuea_ 38 TFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVISF-------------V----------NSTSHFWLE 94 (205)
T ss_dssp HHHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEECCC-------------C----------CSSSCGGGG
T ss_pred HHHHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHhCCEEEec-------------c----------CCCCCcccc
Confidence 45577777776555557999999999999999999999986432111 0 000111111
Q ss_pred HHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHH-HHHHHhhCC-------------CCEEEEEEcCCC---CcchHH
Q 036794 508 SILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSA-ISKVVDRAP-------------RRVVFILVSSSL---DALPHI 570 (1152)
Q Consensus 508 eIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqna-LLklLEepp-------------~~VifILaTN~~---dkL~~a 570 (1152)
+. .+.+++++||+......-... |..+++..+ ....+|++||.. +.-...
T Consensus 95 ------------~l-~~~kv~l~dD~t~~~~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~ 161 (205)
T d1tuea_ 95 ------------PL-TDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPY 161 (205)
T ss_dssp ------------GG-TTCSSEEEEEECHHHHHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHH
T ss_pred ------------cc-cCCeEEEEeccccchHHHHHHHHHhccCCCeeeeecccCCcccccCCCEEEEcCCCCCccccchh
Confidence 11 345899999976544433344 344555411 112366777643 234567
Q ss_pred HHccceEEEecCC
Q 036794 571 IISRCQKFFFPKM 583 (1152)
Q Consensus 571 L~SR~qvI~F~~p 583 (1152)
|.+|..+|.|+.+
T Consensus 162 L~sRi~~f~F~~~ 174 (205)
T d1tuea_ 162 LESRITVFEFPNA 174 (205)
T ss_dssp HHTSCEEEECCSC
T ss_pred hhheEEEEECCCc
Confidence 9999999999843
No 40
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.18 E-value=0.0014 Score=69.50 Aligned_cols=117 Identities=15% Similarity=0.224 Sum_probs=73.5
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHH
Q 036794 429 VAQALSNAVMRR-KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFE 507 (1152)
Q Consensus 429 v~q~Lk~aL~~g-ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vd 507 (1152)
+...|..++... ....+++|+||++||||+++.+|.+.++... |... ....+.+.
T Consensus 89 f~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~lg~~~------------~~~~------------~~~~f~l~ 144 (267)
T d1u0ja_ 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVPFYG------------CVNW------------TNENFPFN 144 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHSSCEE------------ECCT------------TCSSCTTG
T ss_pred HHHHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHhcchh------------hccc------------cCCCcccc
Confidence 345555566433 4446899999999999999999999875321 1100 00112111
Q ss_pred HHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh--------------CCCCEEEEEEcCCCCc-------
Q 036794 508 SILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR--------------APRRVVFILVSSSLDA------- 566 (1152)
Q Consensus 508 eIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe--------------pp~~VifILaTN~~dk------- 566 (1152)
+. .+.+++++||+..- ....+.|..++.. .....++|+++|++..
T Consensus 145 ------------~l-~~k~~~~~~e~~~~-~~~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~ 210 (267)
T d1u0ja_ 145 ------------DC-VDKMVIWWEEGKMT-AKVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNST 210 (267)
T ss_dssp ------------GG-SSCSEEEECSCCEE-TTTHHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEE
T ss_pred ------------cc-CCCEEEEEeCCCcc-ccHHHHHHHhcCCCceEeecccCCCcEeeCCeEEEEeCCCcccccCCCcc
Confidence 11 34589999998653 3344556555543 2245677888877643
Q ss_pred ---chHHHHccceEEEecCC
Q 036794 567 ---LPHIIISRCQKFFFPKM 583 (1152)
Q Consensus 567 ---L~~aL~SR~qvI~F~~p 583 (1152)
-...|.+|+..|.|...
T Consensus 211 ~~~~~~~l~~R~~~~~F~~~ 230 (267)
T d1u0ja_ 211 TFEHQQPLQDRMFKFELTRR 230 (267)
T ss_dssp ECTTHHHHHTTEEEEECCSC
T ss_pred ccccchHhhhhEEEEECCCc
Confidence 24679999999998764
No 41
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.14 E-value=0.00087 Score=63.71 Aligned_cols=26 Identities=27% Similarity=0.402 Sum_probs=23.3
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++|+||+|||||++++.++..+...
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~~~ 28 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLKSS 28 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHC
Confidence 48999999999999999999998544
No 42
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.07 E-value=0.00081 Score=74.15 Aligned_cols=42 Identities=17% Similarity=0.330 Sum_probs=29.1
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcchH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDALPH 569 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dkL~~ 569 (1152)
...+|||||+.++.......++..+ +....+|++. +++.|++
T Consensus 261 ~~d~lIIDEaSmv~~~l~~~ll~~~---~~~~~lILvG-D~~QLpp 302 (359)
T d1w36d1 261 HLDVLVVDEASMIDLPMMSRLIDAL---PDHARVIFLG-DRDQLAS 302 (359)
T ss_dssp SCSEEEECSGGGCBHHHHHHHHHTC---CTTCEEEEEE-CTTSGGG
T ss_pred ccceeeehhhhccCHHHHHHHHHHh---cCCCEEEEEC-ChhhccC
Confidence 4579999999999877665555544 5567777765 4444554
No 43
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.00 E-value=0.0012 Score=67.88 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=72.3
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhh--
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVT-- 518 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~-- 518 (1152)
+.+++++|.||+|+||||++--||..+.... ....++..|.......++++...+.+..
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g-------------------~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~ 70 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKG-------------------FKVGLVGADVYRPAALEQLQQLGQQIGVPV 70 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTT-------------------CCEEEEECCCSSHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-------------------CceEEEEeeccccchhHHHHHhccccCcce
Confidence 5677899999999999999888887664321 1111222222111112222222111110
Q ss_pred ------------------CCCCCCceEEEEeCCCCCCHH----HHHHHHHHHhh-CCCCEEEEEEcCCCCcchHHHHcc-
Q 036794 519 ------------------SRPPSQYRIFVFDDCDTLSPD----SWSAISKVVDR-APRRVVFILVSSSLDALPHIIISR- 574 (1152)
Q Consensus 519 ------------------~P~~a~~kVVIIDEID~Ls~e----aqnaLLklLEe-pp~~VifILaTN~~dkL~~aL~SR- 574 (1152)
......+.+||||=++..+.+ ....|.++.+. .+..+.+++.++.-......+..+
T Consensus 71 ~~~~~~~~~~~~~~~a~~~~~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~~ 150 (211)
T d1j8yf2 71 YGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFN 150 (211)
T ss_dssp ECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHHH
T ss_pred eecccchhhhHHHHHHHHHhhccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhhhh
Confidence 000134689999998875432 12445555554 345677777765433222323222
Q ss_pred ----ceEEEecCCChhHHHHHHHHHHHHcCCC
Q 036794 575 ----CQKFFFPKMKDADIIYTLQWIASKEGIE 602 (1152)
Q Consensus 575 ----~qvI~F~~p~~~EI~eiL~~iakkeGl~ 602 (1152)
...+-|.++++....--+-..+...++.
T Consensus 151 ~~~~~~~lI~TKlDet~~~G~~l~~~~~~~lP 182 (211)
T d1j8yf2 151 QASKIGTIIITKMDGTAKGGGALSAVAATGAT 182 (211)
T ss_dssp HHCTTEEEEEECTTSCSCHHHHHHHHHTTTCC
T ss_pred cccCcceEEEecccCCCcccHHHHHHHHHCcC
Confidence 2346688888776655555555554444
No 44
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=96.83 E-value=0.00061 Score=62.47 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=29.2
Q ss_pred HHhhCCCCCCceEEEEeCCCCCCHHHHH--HHHHHHhhCCCCEEEEEEcC
Q 036794 515 NMVTSRPPSQYRIFVFDDCDTLSPDSWS--AISKVVDRAPRRVVFILVSS 562 (1152)
Q Consensus 515 ~a~~~P~~a~~kVVIIDEID~Ls~eaqn--aLLklLEepp~~VifILaTN 562 (1152)
.........+.++||+||+|.+.+.... .++..+...+ +..+|+.|.
T Consensus 89 ~~~~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~~-~~~~l~lTA 137 (140)
T d1yksa1 89 RMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARAN-ESATILMTA 137 (140)
T ss_dssp HHTSSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHHTT-SCEEEEECS
T ss_pred HHhccccccceeEEEEccccccChhhHHHHHHHHHHhhCC-CCCEEEEEc
Confidence 3444555678899999999999776433 3444444433 445555543
No 45
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.00045 Score=67.30 Aligned_cols=41 Identities=22% Similarity=0.366 Sum_probs=32.2
Q ss_pred HHHHHHHHhCCCCc---EEEEEcCCCchHHHHHHHHHHHHcccC
Q 036794 431 QALSNAVMRRKVGL---LYVFYGPHGTGKTSCARIFARALNCQS 471 (1152)
Q Consensus 431 q~Lk~aL~~gri~~---~yLL~GPpGTGKTtlARaLAkeL~~~~ 471 (1152)
+.+.+++..++.++ +++|+|+||+||||+|+.||+.+++..
T Consensus 4 ~~~~~~~~~~~~~~~g~vI~L~G~pGSGKTTiAk~La~~l~~~~ 47 (195)
T d1x6va3 4 RNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHG 47 (195)
T ss_dssp HHHHHHHHSSSCSCCCEEEEEESSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhcCCCCeEEEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 34555665555554 788999999999999999999998753
No 46
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.71 E-value=0.00033 Score=65.34 Aligned_cols=26 Identities=35% Similarity=0.599 Sum_probs=23.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++|+||+|+||||+|+.||+.+++.
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L~~~ 29 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQLNME 29 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTTCE
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 37889999999999999999999865
No 47
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.69 E-value=0.00047 Score=65.84 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=27.2
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 440 RKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 440 gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++.++.|+|+||||+||||+|+.|++.+++.
T Consensus 3 ~~~~~iivl~G~~GsGKsT~a~~La~~l~~~ 33 (171)
T d1knqa_ 3 NHDHHIYVLMGVSGSGKSAVASEVAHQLHAA 33 (171)
T ss_dssp CTTSEEEEEECSTTSCHHHHHHHHHHHHTCE
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456789999999999999999999999765
No 48
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.67 E-value=0.00044 Score=65.90 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcccC
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQS 471 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~~ 471 (1152)
...++|.||+||||||+|++||+.++...
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~~~~ 35 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFNTTS 35 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCCe
Confidence 45689999999999999999999987653
No 49
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.67 E-value=0.0011 Score=65.33 Aligned_cols=87 Identities=11% Similarity=0.007 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCC
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRP 521 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~ 521 (1152)
.+..+|++|+||+||||+|+.++...++. .+..|. ......+...+....
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~------------------------~i~~D~--~~~~~~~~~~~~~~l---- 62 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYV------------------------HVNRDT--LGSWQRCVSSCQAAL---- 62 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCE------------------------EEEHHH--HCSHHHHHHHHHHHH----
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCCE------------------------EEchHH--HHHHHHHHHHHHHHH----
Confidence 34589999999999999999886554322 111110 012233333333322
Q ss_pred CCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEE
Q 036794 522 PSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILV 560 (1152)
Q Consensus 522 ~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILa 560 (1152)
..+..||||... +.......++.+..+....+.+|..
T Consensus 63 -~~g~~vIiD~t~-~~~~~R~~~~~~a~~~~~~~~~v~l 99 (172)
T d1yj5a2 63 -RQGKRVVIDNTN-PDVPSRARYIQCAKDAGVPCRCFNF 99 (172)
T ss_dssp -HTTCCEEEESCC-CSHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred -HCCCCceeeCcC-CCHHHHHHHHHHHHhcCCCEEEEEe
Confidence 223567888665 4555556677776665555555544
No 50
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.66 E-value=0.0046 Score=54.76 Aligned_cols=88 Identities=15% Similarity=0.177 Sum_probs=75.7
Q ss_pred chhhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHHhCCCCcccHHHHHH
Q 036794 649 SDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFRRQPLSKEEMEKLRQ 728 (1152)
Q Consensus 649 ~ee~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~r~~ls~~s~~kL~q 728 (1152)
+++.+.++++++.++++..+.+.++.++.+|.+...|+.+|.+.+.. ...++-....+
T Consensus 2 P~~~i~~il~~~~~~~f~~a~~~i~~l~~~Gys~~dIl~~l~~~vv~----------------------~~~i~~~~k~~ 59 (91)
T d1sxjd1 2 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYIT----------------------NDNFDTNFKNQ 59 (91)
T ss_dssp CSHHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHH----------------------CSSSCHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh----------------------cCCCCHHHHHH
Confidence 45567899999999999999999999999999999999998876431 12356667788
Q ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHcC
Q 036794 729 ALKTLSEAEKQLRMSNDKLTWLTAALLQLA 758 (1152)
Q Consensus 729 aL~~L~eaD~qLK~s~dprl~LE~lLLkLa 758 (1152)
++..++++|..|-.|.++.+.|..++.+++
T Consensus 60 i~~~la~~d~rL~~G~~e~lQL~~lla~i~ 89 (91)
T d1sxjd1 60 ISWLLFTTDSRLNNGTNEHIQLLNLLVKIS 89 (91)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 899999999999999999999999998876
No 51
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.64 E-value=0.0023 Score=59.92 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=20.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..++|+||||+||||+|+.|++..
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHhC
Confidence 368899999999999999887653
No 52
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=96.64 E-value=0.002 Score=60.09 Aligned_cols=39 Identities=23% Similarity=0.496 Sum_probs=24.5
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhh--CCCCEEEEEEc
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDR--APRRVVFILVS 561 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEe--pp~~VifILaT 561 (1152)
.++.+|||||+|.+.......+..+++. ......+|+.|
T Consensus 93 ~~~~~vIiDE~H~~~~~~~~~~~~~l~~~~~~~~~~~l~~T 133 (136)
T d1a1va1 93 GAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLAT 133 (136)
T ss_dssp CCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEE
T ss_pred hcCCEEEEecccccCHHHHHHHHHHHHHHHHCCCCcEEEEe
Confidence 5678999999999987754444444443 22344444444
No 53
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.61 E-value=0.00054 Score=65.16 Aligned_cols=29 Identities=31% Similarity=0.392 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
-+.+++|+|+||+||||+|++||+.|+..
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~ 33 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQ 33 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhc
Confidence 35678999999999999999999999865
No 54
>d1iqpa1 a.80.1.1 (A:233-327) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.58 E-value=0.0048 Score=55.17 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=74.8
Q ss_pred chhhHHHHHHHHHcCCHHHHHHHHHHHH-HhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHHhCCCCcccHHHHH
Q 036794 649 SDEKLVDLLDLALSADTVNTVKNLRVIM-ETGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFRRQPLSKEEMEKLR 727 (1152)
Q Consensus 649 ~ee~ifdLldAils~d~~~ALk~L~~LL-~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~r~~ls~~s~~kL~ 727 (1152)
.++++.++++.++++++.+|...+++++ ..|.++..|+.+|..++.. . .++-....
T Consensus 3 ~P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~~~v~~----------------------~-~~~~~~k~ 59 (95)
T d1iqpa1 3 RPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFN----------------------L-PIEEPKKV 59 (95)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHGGG----------------------S-SSCHHHHH
T ss_pred CcHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh----------------------c-CCCHHHHH
Confidence 4567889999999999999999999986 5799999999998775431 1 35566678
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHcC
Q 036794 728 QALKTLSEAEKQLRMSNDKLTWLTAALLQLA 758 (1152)
Q Consensus 728 qaL~~L~eaD~qLK~s~dprl~LE~lLLkLa 758 (1152)
.++..++++|..|-.|.++.+-|+.++..+|
T Consensus 60 ~ll~~la~~d~rL~~G~~e~iQL~alla~~~ 90 (95)
T d1iqpa1 60 LLADKIGEYNFRLVEGANEIIQLEALLAQFT 90 (95)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 8999999999999999999999999999887
No 55
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.56 E-value=0.0039 Score=63.91 Aligned_cols=29 Identities=28% Similarity=0.460 Sum_probs=24.8
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 440 RKVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 440 gri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
++.+++++|.||+|+||||++--||..+.
T Consensus 6 ~~~p~vi~lvGptGvGKTTTiAKLA~~~~ 34 (211)
T d2qy9a2 6 GKAPFVILMVGVNGVGKTTTIGKLARQFE 34 (211)
T ss_dssp SCTTEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45577899999999999999888888765
No 56
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.49 E-value=0.0063 Score=62.10 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=22.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+..++|.||+|+||||++--||..+.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~ 31 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQ 31 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 45789999999999999888887764
No 57
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.48 E-value=0.00062 Score=64.73 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=23.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++|+||||+||||+|+.||+.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~ 31 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLK 31 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCc
Confidence 37899999999999999999998865
No 58
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.46 E-value=0.0039 Score=63.99 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..|++++|.||+|+||||++--||..+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~ 36 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFV 36 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999888887764
No 59
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.37 E-value=0.0058 Score=62.28 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+.+++|.||+|+||||++--||..+..
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~ 36 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKG 36 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999888887653
No 60
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.33 E-value=0.00085 Score=63.34 Aligned_cols=26 Identities=35% Similarity=0.680 Sum_probs=23.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..++|+||||+||||+|+.|++.++.
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~ 28 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDN 28 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 36899999999999999999998764
No 61
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.07 E-value=0.0014 Score=62.15 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=24.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
..++|+|++|+||||+|+.|++.++..
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~ 30 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEP 30 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 478999999999999999999998743
No 62
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=95.84 E-value=0.002 Score=61.38 Aligned_cols=25 Identities=40% Similarity=0.569 Sum_probs=22.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
-.++|+||||+||||+|+.|++.++
T Consensus 6 ~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 6 INILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 3589999999999999999999875
No 63
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.72 E-value=0.0016 Score=62.11 Aligned_cols=28 Identities=25% Similarity=0.428 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+..++|.||||+||||+|++|++.++..
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~lg~~ 31 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLPGVP 31 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4578999999999999999999887644
No 64
>d1sxjc1 a.80.1.1 (C:239-333) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.70 E-value=0.043 Score=48.66 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=71.6
Q ss_pred hhhHHHHHHHHHcCCHHHHHHHHHHHH-HhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHHhCCCCcccHHHHHH
Q 036794 650 DEKLVDLLDLALSADTVNTVKNLRVIM-ETGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFRRQPLSKEEMEKLRQ 728 (1152)
Q Consensus 650 ee~ifdLldAils~d~~~ALk~L~~LL-~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~r~~ls~~s~~kL~q 728 (1152)
.+.+-++++.++++++..|.+.++.|+ +.|.++..|+.+|.+++... ...+.....+
T Consensus 3 P~~I~~il~~~l~~~f~~a~~~l~~l~~~~G~s~~dIl~~l~~~i~~~----------------------~~~~~~~k~~ 60 (95)
T d1sxjc1 3 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDY----------------------ELQNEETRVH 60 (95)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTTS----------------------CCSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc----------------------CCCCHHHHHH
Confidence 456788999999999999999999997 45999999999998865421 1122334467
Q ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHcC
Q 036794 729 ALKTLSEAEKQLRMSNDKLTWLTAALLQLA 758 (1152)
Q Consensus 729 aL~~L~eaD~qLK~s~dprl~LE~lLLkLa 758 (1152)
+++.++++|..|-.|.+..+-|..++-.++
T Consensus 61 ll~~la~~e~rL~~G~~e~lQL~~lla~~~ 90 (95)
T d1sxjc1 61 LLTKLADIEYSISKGGNDQIQGSAVIGAIK 90 (95)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 899999999999999999999999988775
No 65
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.61 E-value=0.0025 Score=61.47 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=22.6
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.|++|+||||+++.||+.++..
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~ 28 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVG 28 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCC
Confidence 5677999999999999999999865
No 66
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.59 E-value=0.0029 Score=61.28 Aligned_cols=26 Identities=35% Similarity=0.514 Sum_probs=23.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++|.|++|+||||+|+.||+.+++.
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~Lg~~ 29 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARALGYE 29 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHTCE
T ss_pred CEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 36788999999999999999999976
No 67
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.40 E-value=0.0033 Score=60.63 Aligned_cols=25 Identities=40% Similarity=0.616 Sum_probs=23.0
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.|+||+||||+++.||+.+++.
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~~~ 27 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLDLV 27 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTCE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCC
Confidence 6788999999999999999999875
No 68
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.31 E-value=0.0045 Score=58.42 Aligned_cols=27 Identities=33% Similarity=0.367 Sum_probs=23.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+++.|+|++|+||||+++.|++.+...
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHC
Confidence 478999999999999999999987643
No 69
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.28 E-value=0.0044 Score=60.83 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.|..++|.||||+||||+|+.||+.++..
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~g~~ 33 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDFGWV 33 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHCCE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHCCc
Confidence 34578999999999999999999998744
No 70
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=95.14 E-value=0.0057 Score=60.40 Aligned_cols=29 Identities=28% Similarity=0.513 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++.+.+.||||+||+|.|+.||+.++..
T Consensus 2 ~~piI~I~GppGSGKgT~ak~La~~~gl~ 30 (225)
T d1ckea_ 2 IAPVITIDGPSGAGKGTLCKAMAEALQWH 30 (225)
T ss_dssp CSCEEEEECCTTSSHHHHHHHHHHHHTCE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhCCc
Confidence 35688999999999999999999999855
No 71
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.08 E-value=0.049 Score=56.08 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=57.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCC-------CCCC--HHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPV-------GNFD--FESILDLLD 514 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaa-------s~~~--vdeIreLle 514 (1152)
+.++|+||...|||++.|.++-.+.-...-...||..+ .+..- ..-+..+... +.+. ..++..+++
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a----~~~~~-d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~ 116 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKV----EIGPI-DRIFTRVGAADDLASGRSTFMVEMTETANILH 116 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEE----EECCC-CEEEEEEC-----------CHHHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCce----ecccc-hhheeEEccCcccccchhHHHHHHHHHHHHHH
Confidence 57899999999999999999876533322222222221 11100 0011122111 1121 234445555
Q ss_pred HHhhCCCCCCceEEEEeCCCCCCH--HH---HHHHHHHHhhCCCCEEEEEEcCCCC
Q 036794 515 NMVTSRPPSQYRIFVFDDCDTLSP--DS---WSAISKVVDRAPRRVVFILVSSSLD 565 (1152)
Q Consensus 515 ~a~~~P~~a~~kVVIIDEID~Ls~--ea---qnaLLklLEepp~~VifILaTN~~d 565 (1152)
.+ .++.+|+|||+..=+. +. ..+++.+|... ..+.+|++|...+
T Consensus 117 ~~------~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~~-~~~~~i~tTH~~~ 165 (234)
T d1wb9a2 117 NA------TEYSLVLMDEIGRGTSTYDGLSLAWACAENLANK-IKALTLFATHYFE 165 (234)
T ss_dssp HC------CTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHHT-TCCEEEEECSCGG
T ss_pred hc------ccccEEeecccccCCChhhhhHHHHHhhhhhhcc-ccceEEEecchHH
Confidence 43 3457999999987542 22 23555555432 3556777776544
No 72
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.04 E-value=0.017 Score=56.54 Aligned_cols=21 Identities=33% Similarity=0.371 Sum_probs=17.2
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
.|+++|+|+|||.++-.++..
T Consensus 26 ~lv~~pTGsGKT~i~~~~~~~ 46 (200)
T d1wp9a1 26 CLIVLPTGLGKTLIAMMIAEY 46 (200)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred eEEEeCCCCcHHHHHHHHHHH
Confidence 689999999999877766654
No 73
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.02 E-value=0.0078 Score=57.14 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=24.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
..++|.|++|+||||+++.|++.++..
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999998755
No 74
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.94 E-value=0.0065 Score=59.46 Aligned_cols=28 Identities=32% Similarity=0.347 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
|..++++|.||+||||+|+.|++.++..
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~ 29 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFI 29 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 4568999999999999999999988754
No 75
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.93 E-value=0.0065 Score=58.56 Aligned_cols=25 Identities=28% Similarity=0.349 Sum_probs=23.1
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||.|+.||+.++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~~~ 27 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYGIP 27 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCc
Confidence 6899999999999999999998765
No 76
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.90 E-value=0.0061 Score=60.00 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=24.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+.++|.||||+||||+|+.|++.++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~ 35 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFV 35 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCe
Confidence 478899999999999999999998754
No 77
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.89 E-value=0.0067 Score=58.90 Aligned_cols=25 Identities=32% Similarity=0.489 Sum_probs=23.0
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||.|+.|++.+++.
T Consensus 3 I~i~G~pGsGKsT~a~~La~~~g~~ 27 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEKLGIP 27 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCc
Confidence 6789999999999999999999765
No 78
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.87 E-value=0.0071 Score=59.17 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
|..++|.||||+||||.|+.||+.++..
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~~ 28 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGYT 28 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCc
Confidence 3468999999999999999999998754
No 79
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=94.72 E-value=0.0068 Score=59.37 Aligned_cols=27 Identities=11% Similarity=0.194 Sum_probs=23.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccC
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQS 471 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~ 471 (1152)
.++|.||||+||||+|+.|++.++...
T Consensus 5 ~I~i~GppGsGKsT~a~~La~~~~~~~ 31 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKTKYQLAH 31 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHHCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcE
Confidence 478999999999999999999987553
No 80
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=94.69 E-value=0.0044 Score=65.02 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=29.8
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCCCCEEEEEEcCCCC
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAPRRVVFILVSSSLD 565 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp~~VifILaTN~~d 565 (1152)
+..|+|+||.-. |.......+++.|.+...+..+|++|.++.
T Consensus 170 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~ 212 (253)
T d3b60a1 170 DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 212 (253)
T ss_dssp CCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGG
T ss_pred CCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHH
Confidence 367999999855 556666677777766444566778888766
No 81
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=94.68 E-value=0.026 Score=52.98 Aligned_cols=43 Identities=19% Similarity=0.300 Sum_probs=26.7
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD 565 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d 565 (1152)
+..-++++|..+.........+..++........+|++.|..|
T Consensus 81 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~iilv~NK~D 123 (161)
T d2gj8a1 81 ADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKAD 123 (161)
T ss_dssp CSEEEEEEETTTCCCCSHHHHCHHHHHHSCTTCCEEEEEECHH
T ss_pred ccccceeeccccccchhhhhhhhhhhhhcccccceeeccchhh
Confidence 3445677777666555555555566666555666777777655
No 82
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=94.56 E-value=0.027 Score=56.47 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+..++|+||||+|||++|..+|..+.
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~ 51 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENAC 51 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999988753
No 83
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=94.43 E-value=0.072 Score=57.33 Aligned_cols=108 Identities=12% Similarity=0.121 Sum_probs=60.1
Q ss_pred cHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCC
Q 036794 426 QNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFD 505 (1152)
Q Consensus 426 Qe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~ 505 (1152)
.+.....|..+++.+. .+|++||+|+||||+.+++...+.....- .....-..+.......+..+......+
T Consensus 152 ~~~~~~~l~~~v~~~~---nili~G~tgSGKTT~l~al~~~i~~~~ri-----vtiEd~~El~l~~~~~~~~~~~~~~~~ 223 (323)
T d1g6oa_ 152 KEQAISAIKDGIAIGK---NVIVCGGTGSGKTTYIKSIMEFIPKEERI-----ISIEDTEEIVFKHHKNYTQLFFGGNIT 223 (323)
T ss_dssp HHHHHHHHHHHHHHTC---CEEEEESTTSSHHHHHHHHGGGSCTTCCE-----EEEESSCCCCCSSCSSEEEEECBTTBC
T ss_pred HHHHHHHHHHHHHhCC---CEEEEeeccccchHHHHHHhhhcccccce-----eeccchhhhhcccccccceeccccchh
Confidence 4566777778887665 38999999999999999998766432110 000000111111112233333323333
Q ss_pred HHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhC
Q 036794 506 FESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRA 551 (1152)
Q Consensus 506 vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEep 551 (1152)
. .+++..+.. -....|++.|+-. .++.. +++.+...
T Consensus 224 ~---~~ll~~~lR----~~pd~iivgEiR~--~ea~~-~l~a~~tG 259 (323)
T d1g6oa_ 224 S---ADCLKSCLR----MRPDRIILGELRS--SEAYD-FYNVLCSG 259 (323)
T ss_dssp H---HHHHHHHTT----SCCSEEEESCCCS--THHHH-HHHHHHTT
T ss_pred H---HHHHHHHhc----cCCCcccCCccCc--hhHHH-HHHHHHhc
Confidence 3 344544322 3447899999863 45554 56677653
No 84
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.38 E-value=0.01 Score=58.04 Aligned_cols=25 Identities=32% Similarity=0.472 Sum_probs=22.3
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||.|+.||+.++..
T Consensus 6 iil~G~pGSGKsT~a~~La~~~g~~ 30 (190)
T d1ak2a1 6 AVLLGPPGAGKGTQAPKLAKNFCVC 30 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCe
Confidence 5678999999999999999998754
No 85
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.32 E-value=0.054 Score=54.02 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=19.3
Q ss_pred EEEEcCCCchHHHHHHHHHHHHc
Q 036794 446 YVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
.+|.+|+|+|||.+|-.++..++
T Consensus 88 ~ll~~~tG~GKT~~a~~~~~~~~ 110 (206)
T d2fz4a1 88 GCIVLPTGSGKTHVAMAAINELS 110 (206)
T ss_dssp EEEEESSSTTHHHHHHHHHHHSC
T ss_pred cEEEeCCCCCceehHHhHHHHhc
Confidence 47889999999999888887654
No 86
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=94.28 E-value=0.011 Score=58.18 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+..++|.||||+||+|.|+.|++.++..
T Consensus 8 ~~iI~l~G~pGSGKsT~a~~La~~~g~~ 35 (194)
T d3adka_ 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYT 35 (194)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHTCCE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCe
Confidence 3568999999999999999999987754
No 87
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=94.26 E-value=0.012 Score=57.30 Aligned_cols=25 Identities=24% Similarity=0.311 Sum_probs=22.9
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||.|+.||+.+++.
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g~~ 27 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYGTP 27 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCc
Confidence 6789999999999999999999765
No 88
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=94.24 E-value=0.012 Score=61.10 Aligned_cols=25 Identities=28% Similarity=0.554 Sum_probs=21.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..+-|.||.|+||||+++.|+..+.
T Consensus 29 e~vaivG~sGsGKSTLl~ll~gl~~ 53 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLLERFYQ 53 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHHhhC
Confidence 3688999999999999999987654
No 89
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.18 E-value=0.012 Score=57.30 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=22.5
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||+|+.||+.++..
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g~~ 29 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFHAA 29 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCc
Confidence 5788999999999999999998754
No 90
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=94.15 E-value=0.046 Score=56.03 Aligned_cols=106 Identities=14% Similarity=0.222 Sum_probs=57.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccc-eEEeCCC-------CCC--CHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRN-IKEVGPV-------GNF--DFESILDLLD 514 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~d-viEIdaa-------s~~--~vdeIreLle 514 (1152)
.++|+||...|||++.|.++-..--...-...||... .+ +-... +..++.. +.+ ...++..+++
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~----~i--~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~ 110 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEA----HL--PLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILK 110 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEE----EE--CCCSEEEEECCC------CCSHHHHHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHHHHHHHhccceeecCce----EE--eecceEEEEECCCccccCCccHHHHhHHHHHHHhc
Confidence 6899999999999999999875432221111222221 11 11101 1122211 111 1234445555
Q ss_pred HHhhCCCCCCceEEEEeCCCCCCHH-----HHHHHHHHHhhCCCCEEEEEEcCCC
Q 036794 515 NMVTSRPPSQYRIFVFDDCDTLSPD-----SWSAISKVVDRAPRRVVFILVSSSL 564 (1152)
Q Consensus 515 ~a~~~P~~a~~kVVIIDEID~Ls~e-----aqnaLLklLEepp~~VifILaTN~~ 564 (1152)
.+ ....+|+|||+..=+.. ...+++..|.+. +..+|++|+..
T Consensus 111 ~~------~~~sLvliDE~~~gT~~~eg~ala~aile~L~~~--~~~~i~tTH~~ 157 (224)
T d1ewqa2 111 EA------TENSLVLLDEVGRGTSSLDGVAIATAVAEALHER--RAYTLFATHYF 157 (224)
T ss_dssp HC------CTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHHH--TCEEEEECCCH
T ss_pred cC------CCCcEEeecccccCcchhhhcchHHHHHHHHhhc--CcceEEeeech
Confidence 43 45689999999876432 233666666553 45677777653
No 91
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=94.08 E-value=1.8 Score=46.09 Aligned_cols=31 Identities=23% Similarity=0.202 Sum_probs=25.5
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 440 RKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 440 gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
...++.+=|+||||.||||+...|+..+...
T Consensus 51 ~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~ 81 (327)
T d2p67a1 51 CGNTLRLGVTGTPGAGKSTFLEAFGMLLIRE 81 (327)
T ss_dssp CSCSEEEEEEECTTSCHHHHHHHHHHHHHHT
T ss_pred cCCceEEEeeCCCCCCHHHHHHHHHHHHHhc
Confidence 3445678899999999999999999877543
No 92
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.07 E-value=0.029 Score=53.79 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCC--CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 429 VAQALSNAVMRRKV--GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 429 v~q~Lk~aL~~gri--~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++.|...+..-+. +-.+-|+||+|+||||+|+.|+..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 6 RIDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp HHHHHHHHHHTSCCSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCCEEEEEECCCCCCHHHHHHHHHHHhccc
Confidence 44555555544322 2356699999999999999999988754
No 93
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=94.06 E-value=0.013 Score=55.94 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=23.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.++|.|++|+||||+++.|++.+...
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999998754
No 94
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=93.92 E-value=0.014 Score=56.42 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=22.7
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||.|+.|++.+++.
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~~~ 27 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYGIP 27 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCc
Confidence 6789999999999999999998754
No 95
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=93.91 E-value=0.014 Score=59.04 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=26.9
Q ss_pred HhCCCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 438 MRRKVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 438 ~~gri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..++.+.+++|+|.||+||||+|+.|++.+.
T Consensus 19 ~~~~kg~vIwltGlsGsGKTTia~~L~~~l~ 49 (208)
T d1m7ga_ 19 LRNQRGLTIWLTGLSASGKSTLAVELEHQLV 49 (208)
T ss_dssp HHTSSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HhCCCCeEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4456677899999999999999999998774
No 96
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=93.85 E-value=0.31 Score=44.52 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.9
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|++|+|||++++.+...
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999998754
No 97
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.77 E-value=0.025 Score=55.97 Aligned_cols=41 Identities=15% Similarity=0.238 Sum_probs=26.7
Q ss_pred CCceEEEEeCCCCCCHH----HHHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTLSPD----SWSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~e----aqnaLLklLEepp~~VifILaTN~ 563 (1152)
....+||+||+|.+... ....++..+...+.++.+|+.|..
T Consensus 137 ~~~~~ii~DE~h~~~~~~r~~~~~~~l~~i~~~~~~~~~l~lSAT 181 (202)
T d2p6ra3 137 KAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSAT 181 (202)
T ss_dssp GGCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred hhhhhccccHHHHhcccccchHHHHHHHHHHhcCCCCcEEEEcCC
Confidence 45679999999987533 244566666665556666665433
No 98
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.76 E-value=0.29 Score=46.67 Aligned_cols=21 Identities=14% Similarity=0.218 Sum_probs=19.0
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
.+.|.|.+|+|||+++..|..
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~ 27 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLG 27 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999864
No 99
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=93.69 E-value=0.014 Score=57.67 Aligned_cols=25 Identities=16% Similarity=0.371 Sum_probs=22.2
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++|.||||+||||+|+.||+.++..
T Consensus 9 IiliG~PGSGKtT~a~~La~~~g~~ 33 (189)
T d2ak3a1 9 AAIMGAPGSGKGTVSSRITKHFELK 33 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHHBCCE
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCe
Confidence 5677999999999999999998754
No 100
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=93.64 E-value=0.013 Score=60.88 Aligned_cols=43 Identities=19% Similarity=0.366 Sum_probs=31.5
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
+.+|+|+||+-. |.......+++.|.+...+..+|++|.+++.
T Consensus 157 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~ 200 (241)
T d2pmka1 157 NPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLST 200 (241)
T ss_dssp CCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGG
T ss_pred ccchhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 468999999854 5666777777777764446677888988763
No 101
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.63 E-value=0.099 Score=51.88 Aligned_cols=25 Identities=20% Similarity=0.279 Sum_probs=22.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..++|+||||+|||++|..++....
T Consensus 38 ~~~~i~G~~GsGKT~lalq~~~~~~ 62 (258)
T d1v5wa_ 38 AITEAFGEFRTGKTQLSHTLCVTAQ 62 (258)
T ss_dssp EEEEEECCTTCTHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999987644
No 102
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=93.55 E-value=0.024 Score=59.53 Aligned_cols=85 Identities=25% Similarity=0.377 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccc------cCCCc-cceEEeCCCCCCCHHHHHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISH------DRGKS-RNIKEVGPVGNFDFESILDLLDN 515 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i------~~g~~-~dviEIdaas~~~vdeIreLle~ 515 (1152)
+..++|+||||+|||++|..++...-... ..|.|...-..+ ..|.. ..++...+ ...+++.++++.
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~q~~g----~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~---~~~E~~~~~i~~ 126 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAAQREG----KTCAFIDAEHALDPIYARKLGVDIDNLLCSQP---DTGEQALEICDA 126 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHTT----CCEEEEESSCCCCHHHHHHTTCCGGGCEEECC---SSHHHHHHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHcCC----CEEEEEccccccCHHHHHHhCCCHHHEEEecC---CCHHHHHHHHHH
Confidence 46899999999999999988887754321 111111100000 11211 22333322 345666666666
Q ss_pred HhhCCCCCCceEEEEeCCCCCC
Q 036794 516 MVTSRPPSQYRIFVFDDCDTLS 537 (1152)
Q Consensus 516 a~~~P~~a~~kVVIIDEID~Ls 537 (1152)
+... ....+||||-+..+.
T Consensus 127 l~~~---~~~~liViDSi~al~ 145 (263)
T d1u94a1 127 LARS---GAVDVIVVDSVAALT 145 (263)
T ss_dssp HHHH---TCCSEEEEECGGGCC
T ss_pred HHhc---CCCCEEEEECccccc
Confidence 5433 345799999998774
No 103
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=93.43 E-value=0.056 Score=52.71 Aligned_cols=52 Identities=13% Similarity=0.272 Sum_probs=36.2
Q ss_pred cCcccCcHHHHHHHHHHHHh------CCCCcEEEEEcCCCchHHHHHHHHHHHHcccC
Q 036794 420 FRDLVGQNLVAQALSNAVMR------RKVGLLYVFYGPHGTGKTSCARIFARALNCQS 471 (1152)
Q Consensus 420 FddLVGQe~v~q~Lk~aL~~------gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~ 471 (1152)
|...+..+..+..+-..+.. .+.+-.++|.|+=|+|||+++|.|++.++...
T Consensus 4 ~~~~l~~e~~t~~lg~~la~~l~~~~~~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~~ 61 (158)
T d1htwa_ 4 LTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQG 61 (158)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHCCSSCEEEEEECSTTSSHHHHHHHHHHHTTCCS
T ss_pred eeeeCCCHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCCccHHHHHHHHHhhccccc
Confidence 34445555555555443332 23445789999999999999999999998753
No 104
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.39 E-value=0.02 Score=59.82 Aligned_cols=42 Identities=17% Similarity=0.397 Sum_probs=30.3
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCCC--CEEEEEEcCCCC
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAPR--RVVFILVSSSLD 565 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp~--~VifILaTN~~d 565 (1152)
+..|+|+||.-. |.......+++.|.+... +..+|++|.++.
T Consensus 169 ~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~ 213 (251)
T d1jj7a_ 169 KPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS 213 (251)
T ss_dssp CCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHH
T ss_pred CCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHH
Confidence 468999999744 566677778888776432 567788887754
No 105
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.35 E-value=0.23 Score=46.80 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=18.5
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||++++.+...
T Consensus 7 ivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678999999999999988653
No 106
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=93.31 E-value=0.021 Score=56.55 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=22.4
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+-+.||||+||||.|+.||+.++..
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~ 30 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFT 30 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCc
Confidence 4577999999999999999999865
No 107
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=93.17 E-value=0.27 Score=51.42 Aligned_cols=87 Identities=22% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccc------cCCCc-cceEEeCCCCCCCHHHHHHHH
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISH------DRGKS-RNIKEVGPVGNFDFESILDLL 513 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i------~~g~~-~dviEIdaas~~~vdeIreLl 513 (1152)
..+..+.|+||+|+|||++|..++...-... ..|.|...-..+ ..|.. ..++.+.+ ...++..+++
T Consensus 55 p~g~itei~G~~~sGKT~l~l~~~~~aqk~g----~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~---~~~E~~~~~~ 127 (268)
T d1xp8a1 55 PRGRITEIYGPESGGKTTLALAIVAQAQKAG----GTCAFIDAEHALDPVYARALGVNTDELLVSQP---DNGEQALEIM 127 (268)
T ss_dssp ETTSEEEEEESTTSSHHHHHHHHHHHHHHTT----CCEEEEESSCCCCHHHHHHTTCCGGGCEEECC---SSHHHHHHHH
T ss_pred cCceEEEEecCCccchHHHHHHHHHHHHhCC----CEEEEEECCccCCHHHHHHhCCCchhEEEEcC---CCHHHHHHHH
Confidence 3446899999999999999998887654321 111111111011 01111 12333322 3466667777
Q ss_pred HHHhhCCCCCCceEEEEeCCCCCC
Q 036794 514 DNMVTSRPPSQYRIFVFDDCDTLS 537 (1152)
Q Consensus 514 e~a~~~P~~a~~kVVIIDEID~Ls 537 (1152)
+.+... ....+||||-+..+.
T Consensus 128 ~~l~~~---~~~~liIiDSi~al~ 148 (268)
T d1xp8a1 128 ELLVRS---GAIDVVVVDSVAALT 148 (268)
T ss_dssp HHHHTT---TCCSEEEEECTTTCC
T ss_pred HHHHhc---CCCcEEEEecccccc
Confidence 776433 456899999998774
No 108
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=93.17 E-value=0.01 Score=62.25 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=31.7
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
+..|+|+||.-. |.......+++.|.....+..+|++|++++.
T Consensus 172 ~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~~ 215 (255)
T d2hyda1 172 NPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLST 215 (255)
T ss_dssp CCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGG
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 467999999855 5667777888888765555567788887763
No 109
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.06 E-value=0.26 Score=48.73 Aligned_cols=41 Identities=20% Similarity=0.354 Sum_probs=27.6
Q ss_pred CCceEEEEeCCCCCCHH-HHHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTLSPD-SWSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~e-aqnaLLklLEepp~~VifILaTN~ 563 (1152)
..-+.++|||+|.|... ....+..+++..+....+|+.+..
T Consensus 142 ~~l~~lV~DEaD~l~~~~f~~~v~~I~~~l~~~~Q~il~SAT 183 (206)
T d1s2ma1 142 SDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSAT 183 (206)
T ss_dssp TTCCEEEEESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEESC
T ss_pred ccceEEEeechhhhhhhhhHHHHHHHHHhCCCCCEEEEEEEe
Confidence 45578999999988655 445666666666665555555443
No 110
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=92.96 E-value=0.2 Score=47.44 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=19.1
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
++.|.|++|+|||++++.|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 588999999999999999964
No 111
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=92.43 E-value=0.14 Score=52.68 Aligned_cols=22 Identities=18% Similarity=0.422 Sum_probs=17.1
Q ss_pred CCCCCCceEEEEeCCCCCCHHH
Q 036794 519 SRPPSQYRIFVFDDCDTLSPDS 540 (1152)
Q Consensus 519 ~P~~a~~kVVIIDEID~Ls~ea 540 (1152)
.....+.++|||||+|.+....
T Consensus 95 ~~~~~~~~~vViDE~H~~~~~~ 116 (305)
T d2bmfa2 95 PIRVPNYNLIIMDEAHFTDPAS 116 (305)
T ss_dssp SSCCCCCSEEEEESTTCCSHHH
T ss_pred CccccceeEEEeeeeeecchhh
Confidence 3444678899999999997654
No 112
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.39 E-value=0.039 Score=52.51 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=23.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
.+..++|+||||+|||++|..+|....
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~ 48 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQ 48 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 345899999999999999999987643
No 113
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.26 E-value=0.22 Score=43.72 Aligned_cols=78 Identities=12% Similarity=0.172 Sum_probs=64.2
Q ss_pred HHcCCHHHHHHHHHHH-HHhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Q 036794 660 ALSADTVNTVKNLRVI-METGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFRRQPLSKEEMEKLRQALKTLSEAEK 738 (1152)
Q Consensus 660 ils~d~~~ALk~L~~L-L~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~r~~ls~~s~~kL~qaL~~L~eaD~ 738 (1152)
+..+++.+|++.+..+ ...|.++..|+.+|.+++.. ...++-....+++..++++|.
T Consensus 10 l~~~~f~~a~~~l~~~l~~~Gys~~DIi~~l~~~i~~----------------------~~~~~e~~k~~il~~la~~~~ 67 (92)
T d1sxjb1 10 LLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKN----------------------LAQVKESVRLEMIKEIGLTHM 67 (92)
T ss_dssp HSCSSHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHT----------------------CTTSCHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH----------------------cccccHHHHHHHHHHHHHHHH
Confidence 4678999999999885 57899999999999887642 123444556678999999999
Q ss_pred HhccCCCHHHHHHHHHHHcCC
Q 036794 739 QLRMSNDKLTWLTAALLQLAP 759 (1152)
Q Consensus 739 qLK~s~dprl~LE~lLLkLa~ 759 (1152)
++-.|.+..+-|..++.++|.
T Consensus 68 rl~~G~~e~lQL~~lla~i~~ 88 (92)
T d1sxjb1 68 RILEGVGTYLQLASMLAKIHK 88 (92)
T ss_dssp HHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHH
Confidence 999999999999999999873
No 114
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=92.24 E-value=0.24 Score=46.34 Aligned_cols=20 Identities=25% Similarity=0.449 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++.+.|..
T Consensus 5 i~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHcC
Confidence 78999999999999998843
No 115
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=92.10 E-value=0.82 Score=46.73 Aligned_cols=46 Identities=22% Similarity=0.104 Sum_probs=36.8
Q ss_pred cCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHH
Q 036794 420 FRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 420 FddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAke 466 (1152)
|..--.|..+...+.+.+..+..- ..||+|..|+|||.++-..+..
T Consensus 54 ~~lt~~Q~~~~~~i~~~~~~~~~~-~~LL~GdvGsGKT~V~~~a~~~ 99 (233)
T d2eyqa3 54 FETTPDQAQAINAVLSDMCQPLAM-DRLVCGDVGFGKTEVAMRAAFL 99 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSSCC-EEEEECCCCTTTHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHhccCcc-CeEEEcCCCCCcHHHHHHHHHH
Confidence 565667888889999988887665 5799999999999988666554
No 116
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.09 E-value=0.43 Score=48.28 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=22.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..++|+|++|+|||+++..||..+.
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ia 54 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQIA 54 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999988764
No 117
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.06 E-value=0.15 Score=48.40 Aligned_cols=21 Identities=38% Similarity=0.610 Sum_probs=18.7
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|++|+|||++++.+...
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999998753
No 118
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.06 E-value=0.095 Score=52.98 Aligned_cols=56 Identities=18% Similarity=0.399 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHH-HHHHHHHHHhhCCCCEEEEEEcCCC
Q 036794 507 ESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPD-SWSAISKVVDRAPRRVVFILVSSSL 564 (1152)
Q Consensus 507 deIreLle~a~~~P~~a~~kVVIIDEID~Ls~e-aqnaLLklLEepp~~VifILaTN~~ 564 (1152)
+.+.+++.. .......-+.|+|||+|.|... ..+.+..+++..+.+.-+|+.+...
T Consensus 140 ~rl~~~l~~--~~~~~~~l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~ 196 (218)
T d2g9na1 140 GRVFDMLNR--RYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATM 196 (218)
T ss_dssp HHHHHHHHT--TSSCSTTCCEEEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCC
T ss_pred hhHHHHHhc--CCcccccceEEEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecC
Confidence 556666543 2234466789999999998654 3456666677766667777766544
No 119
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.00 E-value=0.078 Score=50.45 Aligned_cols=20 Identities=30% Similarity=0.522 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 5 i~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 68999999999999998865
No 120
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.98 E-value=0.12 Score=49.16 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||+++..+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988653
No 121
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=91.77 E-value=2.5 Score=44.77 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=25.2
Q ss_pred hCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 439 RRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 439 ~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
....+..+=|+||||+||||+.-.+...+..
T Consensus 47 ~~~~~~~igitG~pGaGKSTli~~l~~~~~~ 77 (323)
T d2qm8a1 47 QTGRAIRVGITGVPGVGKSTTIDALGSLLTA 77 (323)
T ss_dssp GCCCSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ccCCceEEeeeCCCCCCHHHHHHHHHHHHhh
Confidence 3445567889999999999999999987643
No 122
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.75 E-value=0.12 Score=51.86 Aligned_cols=41 Identities=17% Similarity=0.396 Sum_probs=28.2
Q ss_pred CCceEEEEeCCCCCCHH-HHHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTLSPD-SWSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~e-aqnaLLklLEepp~~VifILaTN~ 563 (1152)
..-+.++|||+|.+... ..+.+.++++..+.+..+++.+..
T Consensus 150 ~~l~~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT 191 (212)
T d1qdea_ 150 DKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSAT 191 (212)
T ss_dssp TTCCEEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CcceEEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEee
Confidence 55689999999988654 345667777776666655555543
No 123
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.72 E-value=0.22 Score=48.66 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=19.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAke 466 (1152)
.++|.|++|+|||++...|...
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999998753
No 124
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.68 E-value=0.25 Score=51.76 Aligned_cols=85 Identities=22% Similarity=0.302 Sum_probs=46.3
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccc------cCC-CccceEEeCCCCCCCHHHHHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISH------DRG-KSRNIKEVGPVGNFDFESILDLLDN 515 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i------~~g-~~~dviEIdaas~~~vdeIreLle~ 515 (1152)
+..+.|+||+|+|||++|..++........ .|.|...-..+ ..| ....++.+.+ ...+++.++++.
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~----~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~---~~~E~~~~~~~~ 132 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVANAQAAGG----VAAFIDAEHALDPDYAKKLGVDTDSLLVSQP---DTGEQALEIADM 132 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHHHHHTTC----EEEEEESSCCCCHHHHHHHTCCGGGCEEECC---SSHHHHHHHHHH
T ss_pred ceeEEEecCCCcHHHHHHHHHHHHHhcCCC----EEEEEECCccCCHHHHHHhCCCHHHeEEecC---CCHHHHHHHHHH
Confidence 468999999999999999877765432211 01110000000 001 1122333332 335666666666
Q ss_pred HhhCCCCCCceEEEEeCCCCCC
Q 036794 516 MVTSRPPSQYRIFVFDDCDTLS 537 (1152)
Q Consensus 516 a~~~P~~a~~kVVIIDEID~Ls 537 (1152)
+... ....+||||-+..+.
T Consensus 133 l~~~---~~~~liIiDSi~al~ 151 (269)
T d1mo6a1 133 LIRS---GALDIVVIDSVAALV 151 (269)
T ss_dssp HHHT---TCEEEEEEECSTTCC
T ss_pred HHhc---CCCCEEEEecccccc
Confidence 5432 456788888887775
No 125
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.62 E-value=0.043 Score=54.85 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+..++|+||||+|||++|-.++...-
T Consensus 36 G~~~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 35899999999999999999987643
No 126
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.61 E-value=0.24 Score=52.08 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=21.6
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..+-|.||.|+||||++++|+..+.
T Consensus 63 e~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 63 EMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHhCCCc
Confidence 4688999999999999999987553
No 127
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.53 E-value=0.72 Score=43.19 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|++|+|||+++..+...
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 789999999999999988653
No 128
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.53 E-value=0.079 Score=50.67 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=17.8
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhc
Confidence 68999999999999998764
No 129
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.39 E-value=0.062 Score=50.88 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998764
No 130
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.34 E-value=0.039 Score=54.45 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=20.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
..++|+||||+|||+++..++..
T Consensus 35 ~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 35 SITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEEEEEESTTSSHHHHHHHHTTT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 48999999999999999888643
No 131
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.06 E-value=0.28 Score=46.66 Aligned_cols=20 Identities=35% Similarity=0.585 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++++.+..
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998865
No 132
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.03 E-value=0.53 Score=46.56 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=28.4
Q ss_pred CCceEEEEeCCCCC-CHHHHHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTL-SPDSWSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~L-s~eaqnaLLklLEepp~~VifILaTN~ 563 (1152)
..-+.|+|||+|.+ ..+....+.++++..+.+..+|+.+..
T Consensus 144 ~~l~~lViDEad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SAT 185 (208)
T d1hv8a1 144 KNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSAT 185 (208)
T ss_dssp TSCCEEEEETHHHHHTTTTHHHHHHHHHTSCSSCEEEEECSS
T ss_pred ccCcEEEEEChHHhhcCCChHHHHHHHHhCCCCCeEEEEEcc
Confidence 55679999999975 333455677777776666666666543
No 133
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.03 E-value=0.11 Score=49.48 Aligned_cols=21 Identities=29% Similarity=0.336 Sum_probs=18.7
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|++|+|||+++..+...
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 689999999999999988654
No 134
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.80 E-value=0.23 Score=48.28 Aligned_cols=20 Identities=25% Similarity=0.453 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 68999999999999998864
No 135
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.77 E-value=0.32 Score=46.04 Aligned_cols=20 Identities=25% Similarity=0.499 Sum_probs=18.2
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++.+.+..
T Consensus 5 i~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 68999999999999998865
No 136
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.75 E-value=0.072 Score=51.55 Aligned_cols=25 Identities=28% Similarity=0.582 Sum_probs=22.0
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
+..++|.||+|+||||+++.|.+..
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~ 26 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERI 26 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhC
Confidence 4578999999999999999998774
No 137
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.60 E-value=0.42 Score=44.68 Aligned_cols=20 Identities=40% Similarity=0.537 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68899999999999998864
No 138
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=90.53 E-value=0.42 Score=44.80 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=19.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAk 465 (1152)
.-++|.|.+|+|||+++..+..
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~ 37 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSM 37 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3489999999999999998864
No 139
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=90.42 E-value=0.089 Score=51.94 Aligned_cols=41 Identities=17% Similarity=0.401 Sum_probs=28.0
Q ss_pred CCceEEEEeCCCCCCHHH-HHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTLSPDS-WSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~ea-qnaLLklLEepp~~VifILaTN~ 563 (1152)
..-+.++|||+|.+.... .+.+..++...+.++-+|+.+..
T Consensus 146 ~~l~~lViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SAT 187 (209)
T d1q0ua_ 146 HTAHILVVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSAT 187 (209)
T ss_dssp GGCCEEEECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ccceEEEEeecccccccccHHHHHHHHHHCCCCCEEEEEEcc
Confidence 456789999999986553 44566666666666666666543
No 140
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=90.33 E-value=0.37 Score=49.09 Aligned_cols=27 Identities=22% Similarity=0.252 Sum_probs=22.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHH
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..+..++|.|+||+|||+++..++..+
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~~ 59 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQW 59 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHhh
Confidence 445689999999999999998888643
No 141
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=90.30 E-value=0.4 Score=45.38 Aligned_cols=20 Identities=25% Similarity=0.444 Sum_probs=18.2
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||+++..+..
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998864
No 142
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.30 E-value=0.33 Score=45.67 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 6 i~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 68999999999999998865
No 143
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.23 E-value=0.38 Score=50.25 Aligned_cols=46 Identities=24% Similarity=0.262 Sum_probs=35.8
Q ss_pred cCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHH
Q 036794 420 FRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 420 FddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAke 466 (1152)
|.-=-.|..++..+.+.+..+..-. .||+|..|+|||.+|-..+..
T Consensus 82 FeLT~~Q~~ai~ei~~d~~~~~~m~-rLL~GdvGSGKT~Va~~a~~~ 127 (264)
T d1gm5a3 82 FKLTNAQKRAHQEIRNDMISEKPMN-RLLQGDVGSGKTVVAQLAILD 127 (264)
T ss_dssp SCCCHHHHHHHHHHHHHHHSSSCCC-CEEECCSSSSHHHHHHHHHHH
T ss_pred ccCCchHHHHHHHHHHHhhccCcce-eeeeccccccccHHHHHHHHH
Confidence 5444568889999988888776544 699999999999988766654
No 144
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.02 E-value=0.44 Score=45.07 Aligned_cols=20 Identities=30% Similarity=0.572 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||+++..+..
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998854
No 145
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=89.96 E-value=0.088 Score=50.03 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=22.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
++-|+|++|+||||++..|+++|...
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~~~ 28 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAVRE 28 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 56799999999999999999988644
No 146
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.95 E-value=0.28 Score=46.25 Aligned_cols=20 Identities=30% Similarity=0.561 Sum_probs=17.6
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||+++..+..
T Consensus 5 i~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 68999999999999988754
No 147
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.86 E-value=0.47 Score=44.82 Aligned_cols=20 Identities=40% Similarity=0.727 Sum_probs=17.7
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 4 i~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHT
T ss_pred EEEECCCCcCHHHHHHHHhC
Confidence 67899999999999998754
No 148
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.86 E-value=0.086 Score=52.07 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=23.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
-.+-|+|++|+||||+|+.|++.++..
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhchh
Confidence 346689999999999999999998754
No 149
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.74 E-value=0.73 Score=45.57 Aligned_cols=41 Identities=17% Similarity=0.328 Sum_probs=26.8
Q ss_pred CCCceEEEEeCCCCCCHH-HHHHHHHHHhhCCCCEEEEEEcC
Q 036794 522 PSQYRIFVFDDCDTLSPD-SWSAISKVVDRAPRRVVFILVSS 562 (1152)
Q Consensus 522 ~a~~kVVIIDEID~Ls~e-aqnaLLklLEepp~~VifILaTN 562 (1152)
...-+.|+|||+|.|... ....+..+++..+.+.-+++.+.
T Consensus 144 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~SA 185 (206)
T d1veca_ 144 VDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSA 185 (206)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEES
T ss_pred ccccceEEEeccccccccchHHHHHHHHHhCCCCCEEEEEEe
Confidence 355679999999977543 44556666666666555555443
No 150
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.74 E-value=0.18 Score=48.12 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 9 v~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999988764
No 151
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=89.71 E-value=0.086 Score=51.73 Aligned_cols=26 Identities=27% Similarity=0.284 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+..++|+|+||+|||+++..+|..+.
T Consensus 34 G~l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45899999999999999999987753
No 152
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.70 E-value=0.085 Score=51.84 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=21.1
Q ss_pred EEEEcCCCchHHHHHHHHHHHHc
Q 036794 446 YVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
++|.||+|+|||++++.|++...
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~ 25 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHS 25 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 78999999999999999998864
No 153
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.55 E-value=0.085 Score=51.51 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=21.0
Q ss_pred EEEEcCCCchHHHHHHHHHHHHc
Q 036794 446 YVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
++|+||+|+|||++++.|++...
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~~ 26 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEYP 26 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHCT
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 78999999999999999988854
No 154
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.40 E-value=0.26 Score=46.54 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||++++.+...
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 689999999999999988653
No 155
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.40 E-value=0.53 Score=44.58 Aligned_cols=20 Identities=30% Similarity=0.449 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||+++..+..
T Consensus 7 i~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 57899999999999998865
No 156
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.18 E-value=0.34 Score=45.78 Aligned_cols=106 Identities=19% Similarity=0.214 Sum_probs=52.6
Q ss_pred EEEEEcCCCchHHH-HHHHHHHHHcccCCC-CCCCC--CCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCC
Q 036794 445 LYVFYGPHGTGKTS-CARIFARALNCQSLE-QPKPC--GFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSR 520 (1152)
Q Consensus 445 ~yLL~GPpGTGKTt-lARaLAkeL~~~~~e-~~epc--g~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P 520 (1152)
.-|++||=..|||+ +.+.+.+...+.... .-.|- ...........|.......+ ....++++......
T Consensus 4 L~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D~R~~~~i~s~~g~~~~~~~~--------~~~~~~~~~~~~~~ 75 (139)
T d2b8ta1 4 IEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEV--------ESAPEILNYIMSNS 75 (139)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCEEE--------SSTHHHHHHHHSTT
T ss_pred EEEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEcccccccceEEcccCceeeeEEe--------ccchhhHHHHHhhc
Confidence 45899999999998 666665543222100 00000 00000111111111111222 12233344433333
Q ss_pred CCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEc
Q 036794 521 PPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVS 561 (1152)
Q Consensus 521 ~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaT 561 (1152)
......+|+|||++.++. ....+...+.+. +..+|++.
T Consensus 76 ~~~~~dvI~IDE~QFf~d-~i~~~~~~~~~~--g~~Viv~G 113 (139)
T d2b8ta1 76 FNDETKVIGIDEVQFFDD-RICEVANILAEN--GFVVIISG 113 (139)
T ss_dssp SCTTCCEEEECSGGGSCT-HHHHHHHHHHHT--TCEEEEEC
T ss_pred cccCcCEEEechhhhcch-hHHHHHHHHHhc--CceEEEEE
Confidence 445678999999999974 455666677663 33455554
No 157
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.77 E-value=0.23 Score=47.01 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++++.+..
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998764
No 158
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=88.69 E-value=0.17 Score=55.80 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=39.4
Q ss_pred CCcCcccCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 418 RTFRDLVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 418 ~sFddLVGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
..|+++--.+...+.|+.++.... -.+||+||+|+||||+..++...++..
T Consensus 135 ~~l~~LG~~~~~~~~l~~l~~~~~--GliLvtGpTGSGKSTTl~~~l~~~~~~ 185 (401)
T d1p9ra_ 135 LDLHSLGMTAHNHDNFRRLIKRPH--GIILVTGPTGSGKSTTLYAGLQELNSS 185 (401)
T ss_dssp CCGGGSCCCHHHHHHHHHHHTSSS--EEEEEECSTTSCHHHHHHHHHHHHCCT
T ss_pred hhhhhhcccHHHHHHHHHHHhhhh--ceEEEEcCCCCCccHHHHHHhhhhcCC
Confidence 356777666777777877765433 368999999999999999999988653
No 159
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.49 E-value=1 Score=42.19 Aligned_cols=20 Identities=30% Similarity=0.473 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 7 i~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68899999999999998865
No 160
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.11 E-value=0.75 Score=44.19 Aligned_cols=23 Identities=26% Similarity=0.444 Sum_probs=20.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
+.++|.|+||+|||++...|...
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999999754
No 161
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.82 E-value=0.26 Score=46.12 Aligned_cols=21 Identities=24% Similarity=0.360 Sum_probs=18.5
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||+++..+...
T Consensus 5 v~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988653
No 162
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.54 E-value=0.76 Score=43.60 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=18.4
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 10 i~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998865
No 163
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=87.53 E-value=0.16 Score=49.46 Aligned_cols=24 Identities=33% Similarity=0.408 Sum_probs=20.0
Q ss_pred CCcEEEEEcCCCchHHHHHHHHHH
Q 036794 442 VGLLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 442 i~~~yLL~GPpGTGKTtlARaLAk 465 (1152)
.+..++|+|+||+|||++|..++.
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~ 48 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLY 48 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHH
Confidence 345899999999999999976654
No 164
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=87.43 E-value=0.97 Score=46.24 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=21.2
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHH
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAk 465 (1152)
.....++|.|.+|+|||++...|..
T Consensus 30 ~~~l~I~LvG~tg~GKSSliN~ilg 54 (257)
T d1h65a_ 30 VNSLTILVMGKGGVGKSSTVNSIIG 54 (257)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHT
T ss_pred CCCcEEEEECCCCCcHHHHHHHHhC
Confidence 4445799999999999999999864
No 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.13 E-value=0.24 Score=47.07 Aligned_cols=20 Identities=25% Similarity=0.489 Sum_probs=18.2
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999988865
No 166
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.11 E-value=0.66 Score=46.74 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=27.8
Q ss_pred CCceEEEEeCCCCCCHH-HHHHHHHHHhhCCCCEEEEEEcCC
Q 036794 523 SQYRIFVFDDCDTLSPD-SWSAISKVVDRAPRRVVFILVSSS 563 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~e-aqnaLLklLEepp~~VifILaTN~ 563 (1152)
..-+.++|||+|.|... ....+..+++..+.+.-+|+.+..
T Consensus 158 ~~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT 199 (222)
T d2j0sa1 158 RAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISAT 199 (222)
T ss_dssp TTCCEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEESC
T ss_pred ccceeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEEe
Confidence 45679999999987554 455677777776666555555443
No 167
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.08 E-value=2.4 Score=39.40 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=19.0
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
.+.|.|.+|+|||++..+|.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999964
No 168
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.90 E-value=0.62 Score=43.92 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.3
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 8 i~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 78999999999999998864
No 169
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.64 E-value=1 Score=41.92 Aligned_cols=20 Identities=25% Similarity=0.394 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++...|..
T Consensus 5 i~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 68999999999999998865
No 170
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=86.63 E-value=1.3 Score=42.27 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=18.9
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
.+.|.|+||+||||+..+|..
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 488999999999999999964
No 171
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.41 E-value=0.33 Score=46.72 Aligned_cols=21 Identities=29% Similarity=0.328 Sum_probs=18.5
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||++++.+...
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhhC
Confidence 789999999999999888653
No 172
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.18 E-value=0.55 Score=46.51 Aligned_cols=39 Identities=18% Similarity=0.494 Sum_probs=25.5
Q ss_pred CCceEEEEeCCCCCCH--HHHHHHHHHHhhCCCCEEEEEEc
Q 036794 523 SQYRIFVFDDCDTLSP--DSWSAISKVVDRAPRRVVFILVS 561 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~--eaqnaLLklLEepp~~VifILaT 561 (1152)
..-+.++|||+|.|.. ...+.+..+++..+.+..+|+.+
T Consensus 144 ~~l~~lVlDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~S 184 (207)
T d1t6na_ 144 KHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFS 184 (207)
T ss_dssp TTCCEEEEESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEE
T ss_pred cccceeehhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEe
Confidence 5567999999997653 34455666666655555555544
No 173
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=86.10 E-value=1 Score=42.17 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=17.9
Q ss_pred EEEEEcCCCchHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLA 464 (1152)
-++|.|++|+|||++...|.
T Consensus 18 kI~vvG~~~vGKSsLi~~l~ 37 (176)
T d1fzqa_ 18 RILLLGLDNAGKTTLLKQLA 37 (176)
T ss_dssp EEEEEESTTSSHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 48999999999999998873
No 174
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=85.87 E-value=0.12 Score=49.92 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..|-.+.|.|+.|+||||+++.|++.++.
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGTTT
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 34557889999999999999999988754
No 175
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.44 E-value=0.27 Score=47.91 Aligned_cols=24 Identities=21% Similarity=0.380 Sum_probs=20.9
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..++|.||+|+||+++++.|.+..
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 458899999999999999988763
No 176
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=85.36 E-value=0.24 Score=49.53 Aligned_cols=24 Identities=29% Similarity=0.574 Sum_probs=21.3
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..++|.||+|+|||++.+.|.+..
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhhC
Confidence 468999999999999999998874
No 177
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.33 E-value=0.56 Score=43.93 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=18.5
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
+++.|.+|+|||++++.+...
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988653
No 178
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=85.03 E-value=0.25 Score=48.78 Aligned_cols=24 Identities=42% Similarity=0.682 Sum_probs=21.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+++|.|++|.||||+...|.+.+.
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~ 25 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE 25 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHh
Confidence 578999999999999999987764
No 179
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.80 E-value=0.77 Score=43.50 Aligned_cols=19 Identities=47% Similarity=0.787 Sum_probs=17.4
Q ss_pred EEEEcCCCchHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLA 464 (1152)
++|.|.+|+|||+++..+.
T Consensus 6 v~lvG~~~vGKTsLi~~~~ 24 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFA 24 (172)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHH
Confidence 6899999999999998875
No 180
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.58 E-value=0.31 Score=45.96 Aligned_cols=20 Identities=30% Similarity=0.360 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998865
No 181
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.48 E-value=0.28 Score=48.90 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=23.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
..+.|.|+.|+||||.++.|++.+...
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~~L~~~ 30 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVEALCAA 30 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 457888999999999999999998754
No 182
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=83.87 E-value=0.28 Score=48.32 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=20.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAke 466 (1152)
+.+|||.|++|+|||++|-.+.+.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc
Confidence 357999999999999999888764
No 183
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.98 E-value=0.69 Score=48.74 Aligned_cols=26 Identities=31% Similarity=0.479 Sum_probs=21.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
|-.+-|.|++|+||||++..|...+.
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~ 52 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLM 52 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHH
Confidence 44555899999999999999987764
No 184
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=82.92 E-value=1.6 Score=45.24 Aligned_cols=40 Identities=15% Similarity=0.246 Sum_probs=29.2
Q ss_pred cCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHH
Q 036794 424 VGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 424 VGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
.-.+...+.+..+++.++ .++.-|+|+|||.+|-.++..+
T Consensus 113 ~~rdyQ~~av~~~l~~~~----~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRR----RILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp CCCHHHHHHHHHHHHHSE----EEECCCTTSCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhcCC----ceeEEEcccCccHHHHHHHHHh
Confidence 334556677777777653 4677899999999988887654
No 185
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.79 E-value=0.39 Score=45.54 Aligned_cols=20 Identities=35% Similarity=0.497 Sum_probs=17.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
+++.|++|+|||+++..+..
T Consensus 6 i~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC-
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68899999999999987754
No 186
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=82.76 E-value=0.28 Score=50.09 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=16.9
Q ss_pred EEEEEcCCCchHHHHH-HHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCA-RIFARAL 467 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlA-RaLAkeL 467 (1152)
.+|+.|+||||||+++ ..++..+
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ll 39 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAHLI 39 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEeeCCccHHHHHHHHHHHHH
Confidence 4789999999999764 4444443
No 187
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=82.18 E-value=0.4 Score=51.11 Aligned_cols=30 Identities=20% Similarity=0.404 Sum_probs=25.6
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 440 RKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 440 gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+.+-.+-|.|++|+||||+|+.|+..+..
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~ 106 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSR 106 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhh
Confidence 355667889999999999999999998863
No 188
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=81.76 E-value=0.41 Score=46.97 Aligned_cols=26 Identities=27% Similarity=0.413 Sum_probs=23.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.+.|.|+.|+||||.++.|++.+...
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L~~~ 29 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETLEQL 29 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999988654
No 189
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=81.55 E-value=2.1 Score=45.77 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=21.8
Q ss_pred EEEEcCCCchHHHHHHHHHHHHcc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+.|-|+-|+||||+++.|++.+..
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEECCccCCHHHHHHHHHHHhcc
Confidence 679999999999999999998764
No 190
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.52 E-value=0.38 Score=43.66 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=18.7
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|++|+|||++...+...
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999988653
No 191
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=81.51 E-value=1.2 Score=42.11 Aligned_cols=20 Identities=25% Similarity=0.350 Sum_probs=17.8
Q ss_pred EEEEEcCCCchHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLA 464 (1152)
-++|.|++|+|||++.+.+.
T Consensus 19 KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEETTSSHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 48899999999999998873
No 192
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.46 E-value=0.37 Score=47.89 Aligned_cols=28 Identities=11% Similarity=0.147 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
|..+.|-|+.|+||||+++.|++.+...
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~ 29 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEW 29 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTS
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhc
Confidence 4468899999999999999999988653
No 193
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.16 E-value=0.27 Score=46.73 Aligned_cols=20 Identities=30% Similarity=0.492 Sum_probs=8.2
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++++.+..
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67899999999999988864
No 194
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=81.14 E-value=0.4 Score=44.01 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=18.3
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||++.+.+..
T Consensus 8 I~ivG~~~vGKSSLi~~~~~ 27 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQV 27 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999998865
No 195
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=81.07 E-value=0.35 Score=47.75 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=20.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
.++||.||+|.|||++|-.+...
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 47999999999999999888653
No 196
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=81.04 E-value=0.47 Score=44.18 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=20.6
Q ss_pred CCCCcEEEEEcCCCchHHHHHHHHHH
Q 036794 440 RKVGLLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 440 gri~~~yLL~GPpGTGKTtlARaLAk 465 (1152)
.+-..-++|.|++|+|||++...|..
T Consensus 10 ~~k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 10 YKKTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp TTCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred cCCCCEEEEECCCCCCHHHHHHHHhC
Confidence 33344589999999999999988843
No 197
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=80.92 E-value=11 Score=34.02 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=19.1
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
+.|.|.||+|||+++.+|...
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 679999999999999999765
No 198
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.87 E-value=0.46 Score=45.97 Aligned_cols=25 Identities=20% Similarity=0.337 Sum_probs=22.3
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
+.|.|..|+||||+++.|++.+...
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~ 27 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAA 27 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC
Confidence 6789999999999999999988643
No 199
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=80.82 E-value=2.8 Score=40.20 Aligned_cols=63 Identities=8% Similarity=0.123 Sum_probs=41.7
Q ss_pred HHHHHHhhCCCCCCceEEEEeCCCCCCHH---HHHHHHHHHhhCCCCEEEEEEcCCCCcchHHHHccce
Q 036794 511 DLLDNMVTSRPPSQYRIFVFDDCDTLSPD---SWSAISKVVDRAPRRVVFILVSSSLDALPHIIISRCQ 576 (1152)
Q Consensus 511 eLle~a~~~P~~a~~kVVIIDEID~Ls~e---aqnaLLklLEepp~~VifILaTN~~dkL~~aL~SR~q 576 (1152)
..++.+...-..+.+.+||+||+...-.- ..+.++.+|+..|..+-+|++..+.. +.|..+..
T Consensus 81 ~~~~~a~~~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p---~~L~e~AD 146 (157)
T d1g5ta_ 81 AVWQHGKRMLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCH---RDILDLAD 146 (157)
T ss_dssp HHHHHHHHHTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCC---HHHHHHCS
T ss_pred HHHHHHHHHhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCC---HHHHHhcc
Confidence 34444443344577899999998543111 23578888998899999999987643 44555554
No 200
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=80.62 E-value=0.46 Score=45.66 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
|-.+-|+|++|+||||+|+.|. ..+
T Consensus 3 p~IIgitG~~gSGKstva~~l~-~~g 27 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALLR-SWG 27 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHHH-HTT
T ss_pred CEEEEEECCCCCCHHHHHHHHH-HCC
Confidence 3345689999999999999984 444
No 201
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=80.26 E-value=0.44 Score=46.60 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=20.2
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
.++||.|++|.|||++|-.+.+.
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 47999999999999999887665
No 202
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=80.08 E-value=0.61 Score=48.14 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=17.0
Q ss_pred EEEEEcCCCchHHHHH-HHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCA-RIFARAL 467 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlA-RaLAkeL 467 (1152)
.+|+.|+||||||+++ +.++..+
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHHHHHHH
Confidence 3789999999999765 4445444
No 203
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.86 E-value=0.93 Score=43.32 Aligned_cols=21 Identities=33% Similarity=0.510 Sum_probs=18.5
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||++++.+...
T Consensus 5 ivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999988653
No 204
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.68 E-value=1.3 Score=41.31 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||+++..+...
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 688999999999999887543
No 205
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=79.28 E-value=2.3 Score=45.48 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHHHc
Q 036794 446 YVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+.|-|+-|+||||+++.|++.+.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCcCCCHHHHHHHHHHHhC
Confidence 66899999999999999988765
No 206
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.65 E-value=3.5 Score=44.74 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=54.5
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcccC--CCCC-CCCCCCCccccccCCCccceEEeCCCCCCCH-HHHHHHHHHHhh
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQS--LEQP-KPCGFCNSCISHDRGKSRNIKEVGPVGNFDF-ESILDLLDNMVT 518 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~~--~e~~-epcg~c~~c~~i~~g~~~dviEIdaas~~~v-deIreLle~a~~ 518 (1152)
+-.+.|.|.+|+|||++..+|...-.... .... .++.....+ +.......+..+|.++.... ....+.+.....
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G~~~~~~~~~~~g~~~tT~~~~~--~~~~~~~~~~l~DtPG~~~~~~~~~~~~~~~~~ 133 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHP--YKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKF 133 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCEE--EECSSCTTEEEEECCCGGGSSCCHHHHHHHTTG
T ss_pred CcEEEEECCCCCCHHHHHHHHhCCCcCCCccCCCCCCCCceeeee--eeccCCCeEEEEeCCCcccccccHHHHHHHhhh
Confidence 34589999999999999999853211000 0000 111111122 22223344556665543211 122233333221
Q ss_pred CCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 519 SRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 519 ~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
....+++++--+.+.... ..+++.+.+....+ |++-|..+.
T Consensus 134 ----~~~d~~l~~~~~~~~~~d-~~l~~~l~~~~k~~--~~V~nK~D~ 174 (400)
T d1tq4a_ 134 ----YEYDFFIIISATRFKKND-IDIAKAISMMKKEF--YFVRTKVDS 174 (400)
T ss_dssp ----GGCSEEEEEESSCCCHHH-HHHHHHHHHTTCEE--EEEECCHHH
T ss_pred ----hcceEEEEecCCCCCHHH-HHHHHHHHHcCCCE--EEEEeCccc
Confidence 234566666445555443 35666776654444 444455554
No 207
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=77.53 E-value=0.68 Score=46.36 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=21.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..+|+||.|+|||++..+|+-.+.+
T Consensus 25 ln~IvG~NGsGKStiL~Ai~~~l~~ 49 (292)
T g1f2t.1 25 INLIIGQNGSGKSSLLDAILVGLYW 49 (292)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHC
T ss_pred eEEEECCCCCCHHHHHHHHHHHhcC
Confidence 5689999999999999999876644
No 208
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=76.91 E-value=0.8 Score=44.54 Aligned_cols=32 Identities=28% Similarity=0.423 Sum_probs=22.0
Q ss_pred cHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHH
Q 036794 426 QNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 426 Qe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLA 464 (1152)
|.+++.. +..|+ .+|+.-|+|+|||.++....
T Consensus 30 Q~~ai~~----~l~g~---~vlv~apTGsGKT~~~~~~~ 61 (206)
T d1oywa2 30 QEEIIDT----VLSGR---DCLVVMPTGGGKSLCYQIPA 61 (206)
T ss_dssp HHHHHHH----HHTTC---CEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHH----HHcCC---CEEEEcCCCCCCcchhhhhh
Confidence 6666554 33443 37899999999998875443
No 209
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=76.74 E-value=4.1 Score=38.12 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=18.5
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
-+.|.|.+|+|||++..+|..
T Consensus 10 kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHC
Confidence 367899999999999999864
No 210
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.92 E-value=0.28 Score=48.47 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=22.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+.|-|+.|+||||+++.|++.+..
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhc
Confidence 4789999999999999999998753
No 211
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.51 E-value=0.77 Score=45.60 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=23.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..+.|.|+.|+||||.++.|++.+..
T Consensus 4 k~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 4 KLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 35789999999999999999998854
No 212
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.48 E-value=12 Score=39.66 Aligned_cols=147 Identities=12% Similarity=0.144 Sum_probs=76.0
Q ss_pred HHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcccCCCCC--------CCC------CCCCccccc----------
Q 036794 432 ALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEQP--------KPC------GFCNSCISH---------- 487 (1152)
Q Consensus 432 ~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~--------epc------g~c~~c~~i---------- 487 (1152)
.+.+.+.....-..+.|.|..|.||||++.+|....+.-..... .+- ..-.....+
T Consensus 6 ~~~~lm~~~~~IRNI~iiGhvd~GKTTL~d~Ll~~~g~i~~~~~~~~~~~D~~~~E~eRgiTi~~~~~~l~~~~~~~~~~ 85 (341)
T d1n0ua2 6 QMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVK 85 (341)
T ss_dssp HHHHHHHCGGGEEEEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHH
T ss_pred HHHHHhcCcccCcEEEEEeCCCCcHHHHHHHHHHHCCCccccccccccccccchhHHhcCceEeCCEEEEEeccCccccc
Confidence 34444443222235889999999999999999765543211100 000 000000000
Q ss_pred -----cCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcC
Q 036794 488 -----DRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSS 562 (1152)
Q Consensus 488 -----~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN 562 (1152)
..+...-+..+|.++..++- .+....+. ..+..+|+||=++.+.......+...+++ ++.+|++-|
T Consensus 86 ~~~~~~~~~~~~inliDtPGh~dF~--~ev~~al~----~~D~allVVda~eGv~~qT~~~~~~a~~~---~~p~i~viN 156 (341)
T d1n0ua2 86 EIKQKTDGNSFLINLIDSPGHVDFS--SEVTAALR----VTDGALVVVDTIEGVCVQTETVLRQALGE---RIKPVVVIN 156 (341)
T ss_dssp HCSSCCCSSEEEEEEECCCCCCSSC--HHHHHHHH----TCSEEEEEEETTTBSCHHHHHHHHHHHHT---TCEEEEEEE
T ss_pred chhccccccceEEEEEcCCCcHHHH--HHHHHHHh----hcCceEEEEecccCcchhHHHHHHHHHHc---CCCeEEEEE
Confidence 01111224446766665432 12222221 15678999999998888887777766665 233444446
Q ss_pred CCCcchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 563 SLDALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 563 ~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
..|++.. +| .....++...+..++.
T Consensus 157 KiDr~~~---------el-~~~~~~~~~~l~~~i~ 181 (341)
T d1n0ua2 157 KVDRALL---------EL-QVSKEDLYQTFARTVE 181 (341)
T ss_dssp CHHHHHH---------TS-CCCHHHHHHHHHHHHH
T ss_pred Ccccccc---------cH-HhhHHHHHHHHcCccc
Confidence 6654332 11 2445566666655544
No 213
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.32 E-value=0.68 Score=44.13 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=17.3
Q ss_pred EEEEcCCCchHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLA 464 (1152)
++|.|++|+|||++++.+.
T Consensus 8 i~ivG~~~vGKTsLi~~l~ 26 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYT 26 (186)
T ss_dssp EEEESCTTSSHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHh
Confidence 6899999999999998875
No 214
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=75.26 E-value=0.57 Score=46.55 Aligned_cols=23 Identities=35% Similarity=0.603 Sum_probs=20.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
.+.|.||.|+||||+.++++..+
T Consensus 29 i~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 29 VVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCChHHHHHHHHhccc
Confidence 47899999999999999997754
No 215
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=74.42 E-value=2.4 Score=44.52 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=22.3
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
-.+|.|++|+|||+++..+++.....
T Consensus 45 r~~I~g~~g~GKT~l~~~i~~~~~~~ 70 (289)
T d1xpua3 45 RGLIVAPPKAGKTMLLQNIAQSIAYN 70 (289)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHH
T ss_pred eeeEeCCCCCCHHHHHHHHHHHHhhc
Confidence 37899999999999999999876543
No 216
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=74.34 E-value=0.86 Score=46.50 Aligned_cols=43 Identities=9% Similarity=0.253 Sum_probs=28.8
Q ss_pred CCceEEEEeCCC-CCCHHHHHHHHHHHhhC--CCCEEEEEEcCCCC
Q 036794 523 SQYRIFVFDDCD-TLSPDSWSAISKVVDRA--PRRVVFILVSSSLD 565 (1152)
Q Consensus 523 a~~kVVIIDEID-~Ls~eaqnaLLklLEep--p~~VifILaTN~~d 565 (1152)
.+++++++||.- .|.+.....+.++|.+. ...+.+|++|.+++
T Consensus 144 ~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~ 189 (229)
T d3d31a2 144 TNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQT 189 (229)
T ss_dssp SCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Confidence 357899999964 45666666666655442 23677888888766
No 217
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=73.89 E-value=0.8 Score=46.73 Aligned_cols=42 Identities=12% Similarity=0.214 Sum_probs=29.3
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhC--CCCEEEEEEcCCCC
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRA--PRRVVFILVSSSLD 565 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEep--p~~VifILaTN~~d 565 (1152)
+++++|+||.-. |.+.....++++|.+. ..++.+|++|.+++
T Consensus 163 ~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~ 207 (230)
T d1l2ta_ 163 NPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN 207 (230)
T ss_dssp CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHH
T ss_pred CCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHH
Confidence 468999999743 5666666666666653 24678888888654
No 218
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.42 E-value=1.1 Score=45.60 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHH
Q 036794 429 VAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 429 v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAk 465 (1152)
-++.|+..+. + ...+|.|++|+||||+..+|..
T Consensus 85 g~~~L~~~l~-~---kt~~~~G~SGVGKSTLiN~L~~ 117 (225)
T d1u0la2 85 GIEELKEYLK-G---KISTMAGLSGVGKSSLLNAINP 117 (225)
T ss_dssp THHHHHHHHS-S---SEEEEECSTTSSHHHHHHHHST
T ss_pred hHhhHHHHhc-C---CeEEEECCCCCCHHHHHHhhcc
Confidence 3566666663 2 4678999999999999999854
No 219
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=72.87 E-value=1 Score=46.01 Aligned_cols=24 Identities=38% Similarity=0.600 Sum_probs=21.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..+-|.||.|+||||+.+.++..+
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 368899999999999999998754
No 220
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=72.85 E-value=0.9 Score=43.24 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=18.1
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|.+|+|||+++..+..
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998865
No 221
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=72.45 E-value=0.89 Score=46.77 Aligned_cols=24 Identities=38% Similarity=0.517 Sum_probs=21.1
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..+-|.||+|+||||++++|+..+
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 468899999999999999998753
No 222
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=72.36 E-value=0.98 Score=44.42 Aligned_cols=24 Identities=33% Similarity=0.555 Sum_probs=19.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+-|+|..|+||||+|+.|. .+++
T Consensus 5 iIgitG~igSGKStv~~~l~-~~G~ 28 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DLGI 28 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HTTC
T ss_pred EEEEECCCcCCHHHHHHHHH-HCCC
Confidence 45689999999999999886 4454
No 223
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=71.98 E-value=0.95 Score=46.50 Aligned_cols=23 Identities=30% Similarity=0.593 Sum_probs=19.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
.+.|.||.|+||||+.+.|+..+
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEEECCCCChHHHHHHHHHcCC
Confidence 35678999999999999998854
No 224
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.70 E-value=0.96 Score=42.25 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=17.9
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||++++.+..
T Consensus 7 v~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 7 IAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67899999999999998864
No 225
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.60 E-value=8.1 Score=36.44 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
+++.|.+|+|||+++..+...
T Consensus 8 i~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 8 LGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEECCTTTTHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988654
No 226
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=71.37 E-value=1.1 Score=43.10 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=22.5
Q ss_pred EEEEEcC-CCchHHHHHHHHHHHHccc
Q 036794 445 LYVFYGP-HGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 445 ~yLL~GP-pGTGKTtlARaLAkeL~~~ 470 (1152)
-|+++|. +|+|||+++-.||.++...
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa~~ 29 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAKAA 29 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHC
Confidence 4899999 5999999999999988644
No 227
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=71.25 E-value=1 Score=46.23 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=29.5
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCC--CCEEEEEEcCCCC
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAP--RRVVFILVSSSLD 565 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp--~~VifILaTN~~d 565 (1152)
+++++|+||.-. |.+.....++++|.+.. ..+.+|++|.+.+
T Consensus 157 ~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~ 201 (240)
T d1g2912 157 KPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQV 201 (240)
T ss_dssp CCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred CCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHH
Confidence 467999999754 56666666666665521 3678888898876
No 228
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=71.19 E-value=0.94 Score=46.50 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=20.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
..+-|.||+|+||||+++.|+..+
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 357899999999999999997643
No 229
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=71.12 E-value=0.45 Score=44.35 Aligned_cols=25 Identities=28% Similarity=0.402 Sum_probs=21.4
Q ss_pred EEEEcCCCchHHHHHHHHHHHHccc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.+|+||.|+|||++..||.-.+...
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~g~ 51 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALIPD 51 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHhcCC
Confidence 4789999999999999998777543
No 230
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=71.06 E-value=1.1 Score=44.55 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=21.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+-|+|+.|+||+|+|+.|+..+++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~ 27 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSA 27 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCE
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCC
Confidence 3679999999999999999887654
No 231
>d1sxje1 a.80.1.1 (E:256-354) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.76 E-value=11 Score=33.42 Aligned_cols=67 Identities=10% Similarity=0.154 Sum_probs=51.4
Q ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHHhchhhhhcchhHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHhccCCCHHH
Q 036794 669 VKNLRVIMETGVEPLALMSQLATVITDILAGSYDFTKDRHRRKFFRRQPLSKEEMEKLRQALKTLSEAEKQLRMSNDKLT 748 (1152)
Q Consensus 669 Lk~L~~LL~~G~dPl~ILs~La~qiRdLL~ak~~~~~g~~~~~~~~r~~ls~~s~~kL~qaL~~L~eaD~qLK~s~dprl 748 (1152)
-..|++|+..+.+|-.|+..|..++.+ ..+.+..--.+++...+..|..++.|+.+-+
T Consensus 28 R~~lYeLL~~cIpp~~Ilk~L~~~Ll~----------------------~~~~d~~lk~eii~~aa~yE~Rl~~GsK~If 85 (99)
T d1sxje1 28 RAVLYDLLAHCIPANIILKELTFSLLD----------------------VETLNTTNKSSIIEYSSVFDERLSLGNKAIF 85 (99)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHTTTT----------------------CTTSCHHHHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh----------------------ccCCchhHHHHHHHHHHHHHHHHHCCCcHHH
Confidence 356888999999999999877764311 1233333345778889999999999999999
Q ss_pred HHHHHHHHc
Q 036794 749 WLTAALLQL 757 (1152)
Q Consensus 749 ~LE~lLLkL 757 (1152)
.||.++.++
T Consensus 86 HLEaFvAkf 94 (99)
T d1sxje1 86 HLEGFIAKV 94 (99)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 232
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.73 E-value=1 Score=42.52 Aligned_cols=21 Identities=24% Similarity=0.297 Sum_probs=18.2
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
+++.|++|+|||+++..+...
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 678899999999999888653
No 233
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=70.53 E-value=2.5 Score=49.28 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=27.0
Q ss_pred HHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 436 AVMRRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 436 aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+...+...++++.|++|+|||+.++.|-+.+..
T Consensus 79 ~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL~~ 112 (684)
T d1lkxa_ 79 SMRQSQENQCVIISGESGAGKTEASKKIMQFLTF 112 (684)
T ss_dssp HHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 3333445568999999999999999999888753
No 234
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=70.03 E-value=1.3 Score=45.44 Aligned_cols=25 Identities=36% Similarity=0.578 Sum_probs=21.5
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..+-|.||.|+||||+.+.|+..+.
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSSC
T ss_pred CEEEEECCCCChHHHHHHHHHcCCC
Confidence 3578999999999999999987643
No 235
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=69.83 E-value=1.1 Score=42.06 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=18.8
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
.++|.|+||+||||+..+|..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999864
No 236
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=69.71 E-value=0.78 Score=43.26 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=18.0
Q ss_pred EEEEEcCCCchHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLA 464 (1152)
-++|.|++|+|||++.+.+.
T Consensus 14 kIvlvG~~~vGKTSli~rl~ 33 (173)
T d1e0sa_ 14 RILMLGLDAAGKTTILYKLK 33 (173)
T ss_dssp EEEEEEETTSSHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 48899999999999999874
No 237
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=69.01 E-value=1.4 Score=44.21 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=20.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..+|+||.|+|||++..||.-.+.
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l~ 48 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGLY 48 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHc
Confidence 568999999999999999976554
No 238
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=68.36 E-value=1.7 Score=43.98 Aligned_cols=28 Identities=32% Similarity=0.344 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 441 KVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 441 ri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
..+..++|+|.=|+||||+|-.+|..+.
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA 33 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLA 33 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHH
Confidence 3466789999999999999999998875
No 239
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=68.19 E-value=0.88 Score=47.94 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=21.4
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
.+.+-++|++|+||||++++|.+.+...
T Consensus 4 ~pIIgIaG~SGSGKTTva~~l~~i~~~~ 31 (288)
T d1a7ja_ 4 HPIISVTGSSGAGTSTVKHTFDQIFRRE 31 (288)
T ss_dssp SCEEEEESCC---CCTHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHhhc
Confidence 3478999999999999999999988654
No 240
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=67.85 E-value=14 Score=37.68 Aligned_cols=99 Identities=9% Similarity=0.056 Sum_probs=51.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCCCC-----CCC-----------CCCCccccccCCCccceEEeCCCCCCCHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLEQP-----KPC-----------GFCNSCISHDRGKSRNIKEVGPVGNFDFES 508 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~-----epc-----------g~c~~c~~i~~g~~~dviEIdaas~~~vde 508 (1152)
.+-|.|..|.||||++.++....+....... .-+ ..-..+..+.. ....+..+|.++..++
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~g~~~~~g~v~~g~~~~D~~~~E~~r~~ti~~~~~~~~~-~~~~~n~iDtPGh~dF-- 80 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLF-RGHRVFLLDAPGYGDF-- 80 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGGGTCCSSCCSHHHHHTTSCCSCEEEEEEE-TTEEEEEEECCCSGGG--
T ss_pred EEEEEcCCCCcHHHHHHHHHHHcCCchhhccchhccccccchHHHHHhCCeEEeecccccc-cccceeEEccCchhhh--
Confidence 4678899999999999999765443211100 000 00000001111 1112445666666553
Q ss_pred HHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhh
Q 036794 509 ILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDR 550 (1152)
Q Consensus 509 IreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEe 550 (1152)
+.+....+.. .+..|++||=.+.........+....+.
T Consensus 81 ~~e~~~al~~----~D~avlvvda~~Gv~~~t~~~~~~~~~~ 118 (267)
T d2dy1a2 81 VGEIRGALEA----ADAALVAVSAEAGVQVGTERAWTVAERL 118 (267)
T ss_dssp HHHHHHHHHH----CSEEEEEEETTTCSCHHHHHHHHHHHHT
T ss_pred hhhhhhhhcc----cCceEEEeeccCCccchhHHHHHhhhhc
Confidence 2223333221 4567999998888777665555444433
No 241
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=67.84 E-value=1.1 Score=45.03 Aligned_cols=23 Identities=26% Similarity=0.326 Sum_probs=20.4
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
++++|+|.-|+||||+.+.+.+.
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHS
T ss_pred CEEEEeeCCCCCHHHHHHHHHhc
Confidence 47999999999999999888764
No 242
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=67.60 E-value=1.2 Score=43.49 Aligned_cols=23 Identities=35% Similarity=0.530 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHHHcc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+-++|+.|+||||+|+.|. .+++
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~ 27 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGV 27 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTC
T ss_pred EEEECCCCCCHHHHHHHHH-HCCC
Confidence 4579999999999999885 3443
No 243
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=67.21 E-value=34 Score=32.88 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=58.1
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCCCCCCC-------------CC-CCccccccCCCccceEEeCCCCCCCHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLEQPKPC-------------GF-CNSCISHDRGKSRNIKEVGPVGNFDFESIL 510 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epc-------------g~-c~~c~~i~~g~~~dviEIdaas~~~vdeIr 510 (1152)
.+.+.|-++.|||||+.+|....+.......... +. ...+..........+..+|.++..++ +.
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~g~~~~~~~~~~~~~~d~~~eE~~rgiTi~~~~~~~~~~~~~i~iiDtPGh~df--~~ 82 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADY--IK 82 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHHHSCSHHHHHHTCCCSCEEEEEECSSCEEEEEECCCSGGG--HH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHhhhccCCcchhhhhhcccchHHhcCCeEEEeeEEEEEeCCeEEEEEeCCCchhh--HH
Confidence 4778899999999999999765543221110000 00 01111111122233555666665443 34
Q ss_pred HHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 511 DLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 511 eLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
+.+..+. .++..||+||=.+.+..+... .+.++....-.. +|++-|..|.
T Consensus 83 ~~~~~~~----~aD~avlVvda~~Gv~~qt~~-~~~~~~~~gi~~-iiv~iNK~D~ 132 (204)
T d2c78a3 83 NMITGAA----QMDGAILVVSAADGPMPQTRE-HILLARQVGVPY-IVVFMNKVDM 132 (204)
T ss_dssp HHHHHHT----TCSSEEEEEETTTCCCHHHHH-HHHHHHHTTCCC-EEEEEECGGG
T ss_pred HHHHHHH----HCCEEEEEEECCCCCcHHHHH-HHHHHHHcCCCe-EEEEEEeccc
Confidence 4444442 256688899977777665544 344444433222 3333366653
No 244
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.05 E-value=1.4 Score=41.77 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=18.6
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|.+|+|||+++..+...
T Consensus 8 ivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988653
No 245
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=66.53 E-value=3.3 Score=48.45 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=27.0
Q ss_pred HHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 435 NAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 435 ~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..+.. +...+++|.|++|.|||..++.+-+.+..
T Consensus 118 ~m~~~-~~nQsIiisGeSGaGKTe~~k~il~yL~~ 151 (712)
T d1d0xa2 118 SMLDD-RQNQSLLITGESGAGKTENTKKVIQYLAS 151 (712)
T ss_dssp HHHHH-TCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCceEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 33333 45668999999999999999999888753
No 246
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=65.76 E-value=1.5 Score=45.28 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=20.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAke 466 (1152)
-.+-|.||.|+||||++++|+..
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl 51 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFL 51 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHHcC
Confidence 35789999999999999999754
No 247
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.53 E-value=1.5 Score=41.99 Aligned_cols=20 Identities=25% Similarity=0.300 Sum_probs=17.8
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..+..
T Consensus 6 vvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999988765
No 248
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=65.01 E-value=8.4 Score=40.05 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=50.8
Q ss_pred EEEEcCCCchHHHHHHHHHHHHcccCCCCCCCCCCCCccccccCCCccceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNCQSLEQPKPCGFCNSCISHDRGKSRNIKEVGPVGNFDFESILDLLDNMVTSRPPSQY 525 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~~~~e~~epcg~c~~c~~i~~g~~~dviEIdaas~~~vdeIreLle~a~~~P~~a~~ 525 (1152)
++|.|++|+|||+++..++........... + +..+.. -+..++ ....++.++++.+..... -++
T Consensus 71 ~~If~~~g~GKt~ll~~~~~~~~~~~~~~~--~--~~~~~~-------v~~~IG----er~~E~~e~~~~~~~~~~-~~~ 134 (285)
T d2jdia3 71 ELIIGDRQTGKTSIAIDTIINQKRFNDGTD--E--KKKLYC-------IYVAIG----QKRSTVAQLVKRLTDADA-MKY 134 (285)
T ss_dssp CEEEESTTSSHHHHHHHHHHHTHHHHTSSC--T--TTCCEE-------EEEEES----CCHHHHHHHHHHHHHTTC-GGG
T ss_pred EEeecCCCCChHHHHHHHHHhHHhhccccc--c--ccceEE-------EEeeeC----ccHHHHHHHHHHhccccc-ccc
Confidence 578899999999998877654321100000 0 000000 011222 234566666666544322 234
Q ss_pred eEEEEeCCCCCCHH------HHHHHHHHHhhCCCCEEEEEE
Q 036794 526 RIFVFDDCDTLSPD------SWSAISKVVDRAPRRVVFILV 560 (1152)
Q Consensus 526 kVVIIDEID~Ls~e------aqnaLLklLEepp~~VifILa 560 (1152)
.|+|+--.+.-+.. +.-++-+++-+...+|.||+-
T Consensus 135 tvvv~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~D 175 (285)
T d2jdia3 135 TIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYD 175 (285)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 56666655553322 122455566666677777774
No 249
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=64.54 E-value=3.9 Score=48.46 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=25.8
Q ss_pred hCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 439 RRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 439 ~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..+.+.+++++|++|+|||..++.+-+.+-.
T Consensus 119 ~~~~~QsIiisGeSGaGKTe~~K~il~yL~~ 149 (794)
T d2mysa2 119 TDRENQSILITGESGAGKTVNTKRVIQYFAT 149 (794)
T ss_dssp HHTCCEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HcCCCcEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 3345668999999999999999999888753
No 250
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=63.29 E-value=21 Score=36.71 Aligned_cols=121 Identities=15% Similarity=0.107 Sum_probs=61.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCC----CC------CCC------CCCCccccccCCCccceEEeCCCCCCCH-H
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLE----QP------KPC------GFCNSCISHDRGKSRNIKEVGPVGNFDF-E 507 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e----~~------epc------g~c~~c~~i~~g~~~dviEIdaas~~~v-d 507 (1152)
.+-|.|..|.||||++.++....+..... .. .|. .....+..+ .-....+..+|.++..++ .
T Consensus 8 ni~i~gh~~~GKTtL~e~ll~~~g~~~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~-~~~~~~~n~iDtPG~~dF~~ 86 (276)
T d2bv3a2 8 NIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTC-FWKDHRINIIDAPGHVDFTI 86 (276)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTSSCC-------------------CCCCCCCSEEEE-EETTEEEEEECCCSSSSCST
T ss_pred EEEEEeCCCCCHHHHHHHHHHhcCccccccceecCceEEeccHHHHhcCCccccceeee-ccCCeEEEEecCCchhhhHH
Confidence 57899999999999999997665432110 00 000 000000111 111223455666665443 2
Q ss_pred HHHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC-------cchHHHHccce
Q 036794 508 SILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD-------ALPHIIISRCQ 576 (1152)
Q Consensus 508 eIreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d-------kL~~aL~SR~q 576 (1152)
++...+.. .+..||+||=.+....... .+.+..++.. +..|+.-|..| .+...|..++.
T Consensus 87 e~~~~l~~-------~D~avlVvda~~Gv~~~T~-~~w~~a~~~~--lP~i~fINKmDr~~ad~~~~l~ei~~~l~ 152 (276)
T d2bv3a2 87 EVERSMRV-------LDGAIVVFDSSQGVEPQSE-TVWRQAEKYK--VPRIAFANKMDKTGADLWLVIRTMQERLG 152 (276)
T ss_dssp THHHHHHH-------CCEEEEEEETTTSSCHHHH-HHHHHHHTTT--CCEEEEEECTTSTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHh-------hhheEEeccccCCcchhHH-HHHHHHHHcC--CCEEEEEecccccccccchhHHHHHHHhC
Confidence 22222222 4567999998888776654 3445555432 22333334443 35555666654
No 251
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=63.18 E-value=1.6 Score=44.88 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=21.3
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.-+|+||.|+|||++..||+-.++.
T Consensus 28 lnvi~G~NGsGKS~il~AI~~~L~~ 52 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAILFVLGG 52 (329)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTS
T ss_pred eEEEECCCCCCHHHHHHHHHHHHCC
Confidence 4589999999999999999766553
No 252
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=62.66 E-value=4.4 Score=47.32 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=26.6
Q ss_pred HHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 436 AVMRRKVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 436 aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
.+...+.+.++++.|++|.|||+.++.|-+.+.
T Consensus 84 ~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL~ 116 (710)
T d1br2a2 84 SMLQDREDQSILCTGESGAGKTENTKKVIQYLA 116 (710)
T ss_dssp HHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 333344566899999999999999999988874
No 253
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=62.32 E-value=1.7 Score=44.36 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=33.2
Q ss_pred CCceEEEEeCCC-CCCHHHHHHHHHHHhhC-CCCEEEEEEcCCCCcchHHHHccce
Q 036794 523 SQYRIFVFDDCD-TLSPDSWSAISKVVDRA-PRRVVFILVSSSLDALPHIIISRCQ 576 (1152)
Q Consensus 523 a~~kVVIIDEID-~Ls~eaqnaLLklLEep-p~~VifILaTN~~dkL~~aL~SR~q 576 (1152)
.+++++|+||.- .|.+.....+.++|.+. ...+.+|++|.+.+... .+-.|+.
T Consensus 156 ~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~~-~~~drv~ 210 (240)
T d1ji0a_ 156 SRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGAL-KVAHYGY 210 (240)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHH-HHCSEEE
T ss_pred hCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HhCCEEE
Confidence 357899999964 46676666666666652 23566778888766433 2444443
No 254
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=62.29 E-value=3.8 Score=48.52 Aligned_cols=37 Identities=27% Similarity=0.267 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 432 ALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 432 ~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+....+..+ ...+++|.|++|+|||..++.+-+.|..
T Consensus 111 Ay~~m~~~~-~nQ~IiisGESGaGKTe~~K~il~yL~~ 147 (789)
T d1kk8a2 111 AYQNMVTDR-ENQSCLITGESGAGKTENTKKVIMYLAK 147 (789)
T ss_dssp HHHHHHHHT-SEEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CCcEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 333444444 4668999999999999999999988753
No 255
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.72 E-value=1.9 Score=40.89 Aligned_cols=18 Identities=17% Similarity=0.418 Sum_probs=17.2
Q ss_pred EEEEcCCCchHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIF 463 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaL 463 (1152)
++|.|.+|+|||++.+.+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 689999999999999999
No 256
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=60.82 E-value=4.9 Score=47.04 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=27.3
Q ss_pred HHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 434 SNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 434 k~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
...+..+ .+.+++|.|++|.|||..++.+-+.+..
T Consensus 86 ~~l~~~~-~~Q~IiisGeSGsGKTe~~k~il~~l~~ 120 (730)
T d1w7ja2 86 KQMARDE-RNQSIIVSGESGAGKTVSAKYAMRYFAT 120 (730)
T ss_dssp HHHHHHT-CCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCeEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3334444 5668999999999999999999888753
No 257
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=60.00 E-value=2.2 Score=43.38 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=28.2
Q ss_pred CCceEEEEeCCCC-CCHHHHHHHHHHHhhC-CCCEEEEEEcCCCC
Q 036794 523 SQYRIFVFDDCDT-LSPDSWSAISKVVDRA-PRRVVFILVSSSLD 565 (1152)
Q Consensus 523 a~~kVVIIDEID~-Ls~eaqnaLLklLEep-p~~VifILaTN~~d 565 (1152)
.+.+++|+||.-. |.+.....+.+++.+. .....+|++|.+++
T Consensus 150 ~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~ 194 (238)
T d1vpla_ 150 VNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNML 194 (238)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 4578999999643 5666666666666542 13567777887765
No 258
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=58.42 E-value=2.1 Score=43.83 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=32.7
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhC-CCCEEEEEEcCCCCcchHHHHccc
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRA-PRRVVFILVSSSLDALPHIIISRC 575 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEep-p~~VifILaTN~~dkL~~aL~SR~ 575 (1152)
++++||+||.-. |.......++++|.+. ...+.+|++|.+.+.+.. +-.|.
T Consensus 168 ~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~~~-~~Drv 220 (254)
T d1g6ha_ 168 NPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLN-YIDHL 220 (254)
T ss_dssp CCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTTGG-GCSEE
T ss_pred CcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHH-hCCEE
Confidence 468999999754 5666666666655442 246778888988875443 33443
No 259
>d3ctda1 a.80.1.2 (A:258-420) Uncharacterized protein YrvN {Prochlorococcus marinus [TaxId: 1219]}
Probab=58.05 E-value=7.9 Score=37.25 Aligned_cols=41 Identities=17% Similarity=0.258 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 036794 651 EKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLAT 691 (1152)
Q Consensus 651 e~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~ 691 (1152)
+.+..+.+.+...|++.|+-+|-+|+..|+||..|...|..
T Consensus 4 d~iSA~~KSiRgSD~dAAly~larml~~Gedp~~i~RRli~ 44 (163)
T d3ctda1 4 DVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLLI 44 (163)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 34567788888999999999999999999999998876655
No 260
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=56.83 E-value=22 Score=36.56 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=19.5
Q ss_pred EEEEcCCCchHHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL 467 (1152)
++|.|++|+|||+++..+++..
T Consensus 71 ~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 71 IGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHHH
Confidence 6899999999999999888764
No 261
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=56.36 E-value=2.3 Score=40.01 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=17.7
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
+.|.|.+|+||||++.+|..
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 67889999999999999853
No 262
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=54.97 E-value=1.7 Score=40.37 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=18.0
Q ss_pred EEEEEcCCCchHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLA 464 (1152)
-+.|.|.|++|||++..+|.
T Consensus 18 ~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 18 EVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp EEEEEECTTSSHHHHHTTTC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 48899999999999998884
No 263
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=54.66 E-value=2.3 Score=42.94 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=19.7
Q ss_pred cEEEEEcCCCchHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAk 465 (1152)
-.+-|.||.|+||||+.++++.
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHhC
Confidence 3578999999999999999976
No 264
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=54.65 E-value=2.4 Score=40.03 Aligned_cols=19 Identities=16% Similarity=0.226 Sum_probs=17.1
Q ss_pred EEEEcCCCchHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFA 464 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLA 464 (1152)
+-|.|+|++|||++..+|.
T Consensus 4 VaiiG~~nvGKSSLin~L~ 22 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVVS 22 (185)
T ss_dssp EEEESSTTSSHHHHHHHSE
T ss_pred EEEECCCCCCHHHHHHHHh
Confidence 6799999999999999884
No 265
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.44 E-value=3.1 Score=38.98 Aligned_cols=21 Identities=14% Similarity=0.312 Sum_probs=18.8
Q ss_pred EEEEcCCCchHHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAke 466 (1152)
++|.|..|+|||++.+.+...
T Consensus 5 iv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999998654
No 266
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=54.29 E-value=25 Score=34.02 Aligned_cols=25 Identities=16% Similarity=-0.032 Sum_probs=19.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
..||.=+.|+|||..|-+++..+..
T Consensus 33 g~iLaDe~GlGKT~~~i~~~~~~~~ 57 (230)
T d1z63a1 33 GICLADDMGLGKTLQTIAVFSDAKK 57 (230)
T ss_dssp CEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCChHHHHHHhhhhhhh
Confidence 3567779999999998888776543
No 267
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=54.15 E-value=2.9 Score=41.21 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=18.3
Q ss_pred EEEEEcCCCchHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAk 465 (1152)
=+||.|..|+|||++.+.+..
T Consensus 8 KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 379999999999999998853
No 268
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=53.50 E-value=41 Score=31.10 Aligned_cols=20 Identities=20% Similarity=0.469 Sum_probs=18.0
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
+-|.|.++.||||+..+|.+
T Consensus 8 IaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEECTTSSHHHHHHHHHT
T ss_pred EEEEeCCCCcHHHHHHHHHH
Confidence 66899999999999999964
No 269
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=53.06 E-value=2.3 Score=43.33 Aligned_cols=24 Identities=33% Similarity=0.434 Sum_probs=19.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
...+|.|++|+||||+..+|....
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC--
T ss_pred ceEEEECCCCccHHHHHHhhccHh
Confidence 356799999999999999986443
No 270
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=52.02 E-value=12 Score=38.63 Aligned_cols=20 Identities=30% Similarity=0.235 Sum_probs=16.8
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|++|+|||+++..++.
T Consensus 70 ~~Ifg~~g~GKt~l~~~~~~ 89 (276)
T d1fx0a3 70 ELIIGDRQTGKTAVATDTIL 89 (276)
T ss_dssp CBEEESSSSSHHHHHHHHHH
T ss_pred EeeccCCCCChHHHHHHHHh
Confidence 57899999999999876543
No 271
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=51.57 E-value=3.3 Score=44.33 Aligned_cols=24 Identities=29% Similarity=0.275 Sum_probs=19.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
++++.|++|+|||++++.+...+.
T Consensus 52 H~~I~G~tGsGKT~~l~~li~~~~ 75 (433)
T d1e9ra_ 52 HLLVNGATGTGKSVLLRELAYTGL 75 (433)
T ss_dssp CEEEEECTTSSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCcHHHHHHHHHHHHH
Confidence 479999999999999887765543
No 272
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=51.32 E-value=11 Score=35.17 Aligned_cols=36 Identities=8% Similarity=0.187 Sum_probs=22.9
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEc
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVS 561 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaT 561 (1152)
..+.+|+|||++.++......+.. +.+. +..+|++.
T Consensus 79 ~~~dvI~IDE~QFf~d~~~~~~~~-l~~~--g~~Viv~G 114 (141)
T d1xx6a1 79 EDTEVIAIDEVQFFDDEIVEIVNK-IAES--GRRVICAG 114 (141)
T ss_dssp TTCSEEEECSGGGSCTHHHHHHHH-HHHT--TCEEEEEE
T ss_pred ccccEEEEeehhhccccHHHHHHh-heeC--CcEEEEEE
Confidence 356899999999998765554444 4443 33444443
No 273
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.18 E-value=3.9 Score=42.88 Aligned_cols=24 Identities=25% Similarity=0.498 Sum_probs=20.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
.-+|+||.|+|||++..||+=.++
T Consensus 27 l~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 457999999999999999975543
No 274
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.83 E-value=14 Score=33.76 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=22.0
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEc
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVS 561 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaT 561 (1152)
...+|+|||++.+. +. ..+...+.+. +..+|++.
T Consensus 73 ~~d~I~IDEaQFf~-dl-~~~~~~~~~~--~~~Viv~G 106 (133)
T d1xbta1 73 GVAVIGIDEGQFFP-DI-VEFCEAMANA--GKTVIVAA 106 (133)
T ss_dssp TCSEEEESSGGGCT-TH-HHHHHHHHHT--TCEEEEEC
T ss_pred ccceEEeehhHHHH-HH-HHHHHHHHhc--CCcEEEEE
Confidence 34799999999996 33 4455566553 44455554
No 275
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=50.59 E-value=7.3 Score=38.83 Aligned_cols=26 Identities=35% Similarity=0.392 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
...++++|.=|+||||++-.||..+.
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA 45 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLA 45 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34788899999999999999998875
No 276
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=50.49 E-value=3.4 Score=43.89 Aligned_cols=19 Identities=47% Similarity=0.774 Sum_probs=16.0
Q ss_pred CcEEEEEcCCCchHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCAR 461 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlAR 461 (1152)
+.+-||+|.+||||||+..
T Consensus 14 ~~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 14 GDVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CCEEEEEECTTSCHHHHTC
T ss_pred CCEEEEEccCCCCcccccc
Confidence 3467999999999999764
No 277
>d3bgea1 a.80.1.2 (A:251-434) Uncharacterized protein NTHI1458 {Haemophilus influenzae [TaxId: 727]}
Probab=50.42 E-value=9.6 Score=37.28 Aligned_cols=41 Identities=15% Similarity=0.174 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 036794 651 EKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLAT 691 (1152)
Q Consensus 651 e~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~ 691 (1152)
+.+..+.+.+...|++.|+-+|-+|+..|+||..|...|..
T Consensus 6 d~iSA~~KSiRgSD~dAaly~larml~~GeDp~~i~RRl~~ 46 (184)
T d3bgea1 6 DLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLA 46 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 45667888888999999999999999999999998876654
No 278
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=49.78 E-value=3.9 Score=38.09 Aligned_cols=20 Identities=15% Similarity=0.358 Sum_probs=17.7
Q ss_pred EEEEcCCCchHHHHHHHHHH
Q 036794 446 YVFYGPHGTGKTSCARIFAR 465 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAk 465 (1152)
++|.|..|+|||++.+.+..
T Consensus 5 ivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhh
Confidence 68999999999999988754
No 279
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=49.50 E-value=8.2 Score=38.85 Aligned_cols=45 Identities=13% Similarity=0.338 Sum_probs=37.6
Q ss_pred CCceEEEEeCCCC-CCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcc
Q 036794 523 SQYRIFVFDDCDT-LSPDSWSAISKVVDRAPRRVVFILVSSSLDAL 567 (1152)
Q Consensus 523 a~~kVVIIDEID~-Ls~eaqnaLLklLEepp~~VifILaTN~~dkL 567 (1152)
....+++|||++. |++..+..|..+|++...+.-||++|..+.-+
T Consensus 240 ~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~~~ 285 (308)
T d1e69a_ 240 KPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVM 285 (308)
T ss_dssp SCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGG
T ss_pred ccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHH
Confidence 3457999999986 68999999999998877788899999888744
No 280
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=48.54 E-value=3.2 Score=42.06 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=19.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARAL 467 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL 467 (1152)
.-+|+||.|+|||++..||.-.+
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTS
T ss_pred eEEEECCCCCcHHHHHHHHHHHh
Confidence 46899999999999999996433
No 281
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=47.86 E-value=30 Score=34.94 Aligned_cols=43 Identities=21% Similarity=0.104 Sum_probs=27.4
Q ss_pred cHHHHHHHHHHHHhC--CCCcEEEEEcCCCchHHHHHHHHHHHHc
Q 036794 426 QNLVAQALSNAVMRR--KVGLLYVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 426 Qe~v~q~Lk~aL~~g--ri~~~yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
|.+.++.|.+.+... ....+.||.=+.|+|||..|-++...+.
T Consensus 60 Q~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia~l~~l~ 104 (298)
T d1z3ix2 60 QREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLL 104 (298)
T ss_dssp HHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 455666666555432 2234577888999999987766655543
No 282
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=47.70 E-value=4.6 Score=43.21 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=23.5
Q ss_pred CcHHHHHHHHHHHH---hCCCCcEEEEEcCCCchHHHHH
Q 036794 425 GQNLVAQALSNAVM---RRKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 425 GQe~v~q~Lk~aL~---~gri~~~yLL~GPpGTGKTtlA 460 (1152)
.|+++.+.+...+. .| ...+++-||+.|+|||.+.
T Consensus 55 ~q~~vy~~v~~lv~~~l~G-~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 55 TQDDVFEDTKYLVQSAVDG-YNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp CHHHHHHTTTHHHHHHHTT-CEEEEEEECSTTSSHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcC-CceeeeccccCCCCccccc
Confidence 45666655543333 34 3457888999999999985
No 283
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=47.38 E-value=4.7 Score=43.21 Aligned_cols=36 Identities=22% Similarity=0.308 Sum_probs=23.1
Q ss_pred CcHHHHHHHHHHHHh--CCCCcEEEEEcCCCchHHHHH
Q 036794 425 GQNLVAQALSNAVMR--RKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 425 GQe~v~q~Lk~aL~~--gri~~~yLL~GPpGTGKTtlA 460 (1152)
.|+.+.+.+...+.. .....+++-||+.|+|||.+.
T Consensus 105 ~Q~~Vy~~v~plv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 105 SQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp CHHHHHTTTHHHHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred CccchHHHHHHHHHHHhcccceeEEeeccCCCccceEe
Confidence 366665544433332 223447889999999999874
No 284
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=47.01 E-value=8.4 Score=37.87 Aligned_cols=43 Identities=16% Similarity=0.295 Sum_probs=32.9
Q ss_pred CceEEEEeCCCC-CCHHHHHHHHHHHhhCCC-CEEEEEEcCCCCc
Q 036794 524 QYRIFVFDDCDT-LSPDSWSAISKVVDRAPR-RVVFILVSSSLDA 566 (1152)
Q Consensus 524 ~~kVVIIDEID~-Ls~eaqnaLLklLEepp~-~VifILaTN~~dk 566 (1152)
...+++|||+.. |.+..+..|.++|.+... ..-||++|.+++-
T Consensus 225 ~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~ 269 (292)
T g1f2t.1 225 EISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEEL 269 (292)
T ss_dssp SCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGG
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHH
Confidence 446999999865 788888999999887533 2478888888773
No 285
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=47.00 E-value=4.6 Score=42.73 Aligned_cols=19 Identities=47% Similarity=0.774 Sum_probs=16.0
Q ss_pred CcEEEEEcCCCchHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCAR 461 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlAR 461 (1152)
..+-||.|-+|||||||..
T Consensus 14 ~~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 14 GDVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp SCEEEEECSTTSSHHHHHC
T ss_pred CCEEEEEccCCCCccccee
Confidence 3567999999999999874
No 286
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=46.81 E-value=3 Score=44.50 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=21.7
Q ss_pred EEEEcCCCchHHHHHHHHHHHHcc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+.|-|+-|+||||+++.|++.+..
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhh
Confidence 679999999999999999998764
No 287
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=46.72 E-value=20 Score=29.83 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCC-CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC--CCCHHHHHHHHh
Q 036794 590 YTLQWIASKEGI-EIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ--RISVPLVQELVG 646 (1152)
Q Consensus 590 eiL~~iakkeGl-~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~--~IT~EdV~elVg 646 (1152)
+-++.+++..|+ .++++++..|+.-..--++++++..-+..-.++ ++|.+||..++.
T Consensus 10 esik~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 10 ESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 356677888999 599999999999887777777777666655554 599999987763
No 288
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=46.22 E-value=28 Score=33.85 Aligned_cols=114 Identities=11% Similarity=0.102 Sum_probs=56.0
Q ss_pred cEEEEEcCCCchHHHHHHHHHHHHcccCCCCC--CCCCC--C----------Cccccc-cCCCccceEEeCCCCCCCHHH
Q 036794 444 LLYVFYGPHGTGKTSCARIFARALNCQSLEQP--KPCGF--C----------NSCISH-DRGKSRNIKEVGPVGNFDFES 508 (1152)
Q Consensus 444 ~~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~--epcg~--c----------~~c~~i-~~g~~~dviEIdaas~~~vde 508 (1152)
+.+-+.|-++.|||||+.+|............ .-... + ..+..+ .......+..+|.++...+
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDtPGh~~f-- 83 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAF-- 83 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEEEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTSCC--
T ss_pred CEEEEEeCCCccHHHHHHHHHhhcchheecCceeeeccccccccccccccccccccceeecccccccccccccceecc--
Confidence 35778899999999999999776432211000 00000 0 000000 0111223555666554221
Q ss_pred HHHHHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 509 ILDLLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 509 IreLle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
.......-..++.-+++||=.+.+..... .++.++.+.... +|++-|..|.
T Consensus 84 ----~~~~~~~~~~~D~~ilVvda~~g~~~~~~-~~~~~~~~~~~p--~iivlNK~D~ 134 (227)
T d1g7sa4 84 ----TTLRKRGGALADLAILIVDINEGFKPQTQ-EALNILRMYRTP--FVVAANKIDR 134 (227)
T ss_dssp ----TTSBCSSSBSCSEEEEEEETTTCCCHHHH-HHHHHHHHTTCC--EEEEEECGGG
T ss_pred ----cccchhcccccceEEEEEecccCcccchh-HHHHHhhcCCCe--EEEEEECccC
Confidence 11111112235677889997777766654 455555553333 4444466664
No 289
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=45.54 E-value=8.1 Score=40.70 Aligned_cols=40 Identities=23% Similarity=0.311 Sum_probs=28.0
Q ss_pred cCcccC----cHHHHHHHHHHHHh---CCCCcEEEEEcCCCchHHHHH
Q 036794 420 FRDLVG----QNLVAQALSNAVMR---RKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 420 FddLVG----Qe~v~q~Lk~aL~~---gri~~~yLL~GPpGTGKTtlA 460 (1152)
|+.+.+ |+++.+.+...+.. | ...+++-||+.|+|||.+.
T Consensus 54 FD~vf~~~~~q~~vy~~v~~~v~~~l~G-~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 54 FDKIFDQQDTNVDVFKEVGQLVQSSLDG-YNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp ESEEECTTCCHHHHHHHHHHHHGGGGGT-CCEEEEEECCTTSSHHHHH
T ss_pred cCeEeCCCCCHHHHHHHhhhhhcchhcc-cccceeeeeccCCcccccc
Confidence 666654 67777766654433 4 3456788999999999876
No 290
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=44.24 E-value=70 Score=30.46 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=55.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccCCCCC--------CCCC----CCCcc-ccccCCCccceEEeCCCCCCCHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQSLEQP--------KPCG----FCNSC-ISHDRGKSRNIKEVGPVGNFDFESILD 511 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~~e~~--------epcg----~c~~c-~~i~~g~~~dviEIdaas~~~vdeIre 511 (1152)
.+-+.|-.+.||||++.+|...+........ .+.. ....+ ..........+..+|.++. . +
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~~~~~~~~~~~~~~~~~~~~~Er~rgiTi~~~~~~~~~~~~~~~~iDtPGh---~---~ 78 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGH---A---D 78 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCEEEEEECSSH---H---H
T ss_pred EEEEEeCCCCcHHHHHHHHHHHHHHcCcchhhhhhhcccchhhcCCCccCCcceEEEEeceeeEEeecCcch---H---H
Confidence 4778999999999999999765432211100 0000 00000 0000111122333443332 1 2
Q ss_pred HHHHHhhCCCCCCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc
Q 036794 512 LLDNMVTSRPPSQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA 566 (1152)
Q Consensus 512 Lle~a~~~P~~a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk 566 (1152)
+...+......++..+++||-.+.+.++....+....+. ... .+|++.|..+.
T Consensus 79 f~~~~~~~~~~aD~allVVda~~G~~~QT~~~~~~a~~~-~~~-~iIv~iNK~D~ 131 (196)
T d1d2ea3 79 YVKNMITGTAPLDGCILVVAANDGPMPQTREHLLLARQI-GVE-HVVVYVNKADA 131 (196)
T ss_dssp HHHHHHHTSSCCSEEEEEEETTTCSCHHHHHHHHHHHHT-TCC-CEEEEEECGGG
T ss_pred HHHHHHHHHhhcCeEEEEEEcCCCCchhHHHHHHHHHHh-cCC-cEEEEEecccc
Confidence 233333333456788999998887776655444433332 221 25555566663
No 291
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=44.19 E-value=3.2 Score=41.08 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=17.2
Q ss_pred EEEEEcCCCchHHHHHHHHHHH
Q 036794 445 LYVFYGPHGTGKTSCARIFARA 466 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAke 466 (1152)
.+++.+|+|+|||+++-..+..
T Consensus 60 ~~~i~apTGsGKT~~~~~~~~~ 81 (237)
T d1gkub1 60 SFAATAPTGVGKTSFGLAMSLF 81 (237)
T ss_dssp CEECCCCBTSCSHHHHHHHHHH
T ss_pred CEEEEecCCChHHHHHHHHHHH
Confidence 3789999999999877655543
No 292
>d2qw6a1 a.80.1.2 (A:241-328) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=42.32 E-value=22 Score=30.73 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=32.2
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 036794 652 KLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLAT 691 (1152)
Q Consensus 652 ~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~ 691 (1152)
.+..+.+.+-..|.+.|+.+|-+|++.| ||..|...|..
T Consensus 3 ~iSA~~KSiRgSD~dAAlywlarml~~G-D~~~i~RRLi~ 41 (88)
T d2qw6a1 3 VISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMV 41 (88)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccHHHHHHHHHHHcC-ChhHHHHHHHH
Confidence 4556788889999999999999999999 88776665543
No 293
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=41.21 E-value=6.5 Score=41.73 Aligned_cols=20 Identities=45% Similarity=0.670 Sum_probs=16.6
Q ss_pred CcEEEEEcCCCchHHHHHHH
Q 036794 443 GLLYVFYGPHGTGKTSCARI 462 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARa 462 (1152)
+.+-||.|-+||||||+...
T Consensus 14 gd~alfFGLSGTGKTTLs~d 33 (323)
T d1ii2a1 14 GDVTVFFGLSGTGKTTLSAD 33 (323)
T ss_dssp CCEEEEECCTTSSHHHHHCC
T ss_pred CCEEEEEccCCCCcccceeC
Confidence 34678999999999999843
No 294
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.84 E-value=11 Score=39.33 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=26.3
Q ss_pred cCcccC----cHHHHHH----HHHHHHhCCCCcEEEEEcCCCchHHHHH
Q 036794 420 FRDLVG----QNLVAQA----LSNAVMRRKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 420 FddLVG----Qe~v~q~----Lk~aL~~gri~~~yLL~GPpGTGKTtlA 460 (1152)
|+.+.+ |+++.+. +...+-.|. ...++-||+.|+|||.+.
T Consensus 46 FD~vf~~~~~q~~vf~~~~~~lv~~~l~G~-n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 46 FDRVFQSSTSQEQVYNDCAKKIVKDVLEGY-NGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp CSEEECTTCCHHHHHHHHTHHHHHHHHTTC-CEEEEEECSTTSSHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHHHHHHHHcCC-CcceeeecccCCCCceec
Confidence 665554 5555443 333334454 457889999999999986
No 295
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=37.67 E-value=15 Score=38.78 Aligned_cols=41 Identities=20% Similarity=0.197 Sum_probs=26.4
Q ss_pred cCcccC----cHHHHHHH-HHHHHh--CCCCcEEEEEcCCCchHHHHH
Q 036794 420 FRDLVG----QNLVAQAL-SNAVMR--RKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 420 FddLVG----Qe~v~q~L-k~aL~~--gri~~~yLL~GPpGTGKTtlA 460 (1152)
|+.+.+ |+.+.+.+ ...+.. .....+++-||++|+|||.+.
T Consensus 50 FD~vf~~~~~q~~vy~~~~~plv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 50 FDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp CSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred CCeEcCCCCCHHHHHHHHHHHHHHHhhccCceeEEecccCCCCcceee
Confidence 666654 66666543 333332 223457889999999999875
No 296
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=37.56 E-value=18 Score=39.20 Aligned_cols=45 Identities=22% Similarity=0.170 Sum_probs=37.4
Q ss_pred cCcHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 424 VGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 424 VGQe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
--|+.+++.|.+.+..|... .+|.|-+|+|||.++..+++..+..
T Consensus 14 gDQP~aI~~l~~~l~~g~~~--q~l~GltGS~ka~~iA~l~~~~~rp 58 (413)
T d1t5la1 14 GDQPQAIAKLVDGLRRGVKH--QTLLGATGTGKTFTISNVIAQVNKP 58 (413)
T ss_dssp TTHHHHHHHHHHHHHHTCSE--EEEEECTTSCHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHhcCCCc--EEEeCCCCcHHHHHHHHHHHHhCCC
Confidence 34788999999999887543 6799999999999999888887654
No 297
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.23 E-value=30 Score=30.77 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=43.6
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
..+.+||+|= .+-..+..+.+..+-+++...+.+|+.|...+ .....+..-+..|-.+|++.+++...|.+++.
T Consensus 50 ~~~dlillD~-~mP~~dG~el~~~ir~~~~~~~piI~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (128)
T d2r25b1 50 ENYNMIFMDV-QMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCA 125 (128)
T ss_dssp CCCSEEEECS-CCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCCCEEEEEe-CCCCCCHHHHHHHHHHccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 3468999993 22222233333333244444554555554433 33444555566788899999999999987764
No 298
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=36.60 E-value=12 Score=39.13 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=25.9
Q ss_pred cCccc----CcHHHHHHH-H----HHHHhCCCCcEEEEEcCCCchHHHHHH
Q 036794 420 FRDLV----GQNLVAQAL-S----NAVMRRKVGLLYVFYGPHGTGKTSCAR 461 (1152)
Q Consensus 420 FddLV----GQe~v~q~L-k----~aL~~gri~~~yLL~GPpGTGKTtlAR 461 (1152)
|+.+. .|+++.+.+ . .++..|. ..+++-||+.|+|||.+..
T Consensus 54 fD~Vf~~~~~q~~vy~~~~~plv~~~~~~G~-n~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 54 VDKVFDDTVDNFTVYENTIKPLIIDLYENGC-VCSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp CSEEECTTCCHHHHHHHHTHHHHHHHHHHCC-EEEEEEECCTTSSHHHHHH
T ss_pred CCeecCCCCCHHHHHHHHHHHHHHHHHhcCC-CeEEEeeeccccccceeee
Confidence 55554 466665442 2 3333343 4468899999999999863
No 299
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.56 E-value=1.6e+02 Score=28.86 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=27.6
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcccC-CCCCCCCCCCCccccc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNCQS-LEQPKPCGFCNSCISH 487 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~~~-~e~~epcg~c~~c~~i 487 (1152)
-+++.|.-.+|||+++.+|. +... +....||..|..-..+
T Consensus 28 ~ivvvG~~SsGKSsliNaLl---g~~~lP~~~~~~T~~~~~i~~ 68 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFV---GRDFLPRGSGIVTRRPLVLQL 68 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHH---TSCCSCCCSSCSCSSCEEEEE
T ss_pred eEEEEcCCCCCHHHHHHHHh---CCCcCCCCCCccccCCEEEEE
Confidence 47899999999999999996 4443 2333566655544443
No 300
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.29 E-value=11 Score=34.56 Aligned_cols=27 Identities=7% Similarity=0.032 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 443 GLLYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 443 ~~~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+-+++|+|-.|.||+++|+++...++.
T Consensus 6 gf~i~~tg~~~~gk~~ia~al~~~l~q 32 (122)
T d1g8fa3 6 GFSIVLGNSLTVSREQLSIALLSTFLQ 32 (122)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 457999999999999999999888764
No 301
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=35.16 E-value=13 Score=41.07 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=16.1
Q ss_pred EEEEcCCCchHHHHH-HHHHHHH
Q 036794 446 YVFYGPHGTGKTSCA-RIFARAL 467 (1152)
Q Consensus 446 yLL~GPpGTGKTtlA-RaLAkeL 467 (1152)
+|+.|.+|||||+++ +.++..+
T Consensus 27 ~lV~A~AGSGKT~~lv~ri~~ll 49 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTHRIAYLM 49 (623)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEEeCchHHHHHHHHHHHHHH
Confidence 677799999999876 4454444
No 302
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=34.91 E-value=14 Score=38.72 Aligned_cols=40 Identities=30% Similarity=0.342 Sum_probs=25.4
Q ss_pred cCcccC----cHHHHHHH----HHHHHhCCCCcEEEEEcCCCchHHHHH
Q 036794 420 FRDLVG----QNLVAQAL----SNAVMRRKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 420 FddLVG----Qe~v~q~L----k~aL~~gri~~~yLL~GPpGTGKTtlA 460 (1152)
|+.+.+ |+++.+.+ ...+-.|. ..+++-||+.|+|||.+.
T Consensus 51 FD~vf~~~~~q~~vy~~~~~~lv~~~l~G~-n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 51 FDMVFGASTKQIDVYRSVVCPILDEVIMGY-NCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp CSEEECTTCCHHHHHHHHHHHHHHHHHTTC-EEEEEEEECTTSSHHHHH
T ss_pred cCEEeCCCCCHHHHHHHHHHHhHHHHhccC-CceEEeeeeccccceEEe
Confidence 555554 56655443 23333343 346889999999999875
No 303
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=34.07 E-value=80 Score=30.69 Aligned_cols=23 Identities=13% Similarity=0.218 Sum_probs=19.8
Q ss_pred EEEEcCCCchHHHHHHHHHHHHc
Q 036794 446 YVFYGPHGTGKTSCARIFARALN 468 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~ 468 (1152)
+.+.|-...||||++.+|....+
T Consensus 12 i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 12 FLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHHHHHHHHcC
Confidence 67899999999999999976544
No 304
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=33.05 E-value=19 Score=38.96 Aligned_cols=43 Identities=26% Similarity=0.207 Sum_probs=36.3
Q ss_pred cHHHHHHHHHHHHhCCCCcEEEEEcCCCchHHHHHHHHHHHHccc
Q 036794 426 QNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARIFARALNCQ 470 (1152)
Q Consensus 426 Qe~v~q~Lk~aL~~gri~~~yLL~GPpGTGKTtlARaLAkeL~~~ 470 (1152)
|+.+++.|.+.+..+... .+|+|-+|++|+.++.++++.++..
T Consensus 13 qp~aI~~l~~~L~~g~~~--~~L~GlsgS~ka~~~A~l~~~~~rp 55 (408)
T d1c4oa1 13 QPKAIAGLVEALRDGERF--VTLLGATGTGKTVTMAKVIEALGRP 55 (408)
T ss_dssp HHHHHHHHHHHHHTTCSE--EEEEECTTSCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHhcCCCc--EEEecCCCCHHHHHHHHHHHHhCCC
Confidence 678899999999876543 6899999999999999998887754
No 305
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=32.91 E-value=82 Score=27.17 Aligned_cols=72 Identities=7% Similarity=-0.013 Sum_probs=42.5
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEc-CCCCcchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVS-SSLDALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaT-N~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
+.+||+|= .+-....+..+.++-+..+...++++++ +..+.....+..-+..|-.+|++.+++...++.+++
T Consensus 47 ~dlillD~-~mp~~~G~~~~~~~r~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~lr 119 (121)
T d1mvoa_ 47 PDLIVLDV-MLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR 119 (121)
T ss_dssp CSEEEEES-SCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred ccEEEecc-cccCCCCchhhhhhhccCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 47999993 3322334444444444433322333333 333444455555566788899999999998887765
No 306
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=32.35 E-value=85 Score=27.73 Aligned_cols=85 Identities=9% Similarity=0.164 Sum_probs=48.8
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcC--CCCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcCCC
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSS--SLDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEGIE 602 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN--~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeGl~ 602 (1152)
+.+|++| +.+-..+.++ +++.+.+...++.+|+.|. +.+....++..-+.-|-.++.+.+++.+.++..+..+ .-
T Consensus 49 ~DlvllD-~~mP~~~G~e-l~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~v~~g~-~~ 125 (138)
T d1a04a2 49 PDLILLD-LNMPGMNGLE-TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE-MV 125 (138)
T ss_dssp CSEEEEE-TTSTTSCHHH-HHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHSC-CC
T ss_pred CCEEEEe-cCCCCCCHHH-HHHHHHhhCCCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHCCC-Cc
Confidence 4799999 3322223444 4444444333333344443 3334555565556678889999999999998877643 33
Q ss_pred CCHHHHHHHH
Q 036794 603 IDKDALKLIA 612 (1152)
Q Consensus 603 Id~dALelLA 612 (1152)
+++.....++
T Consensus 126 ~~~~~~~~la 135 (138)
T d1a04a2 126 LSEALTPVLA 135 (138)
T ss_dssp CCTTTHHHHH
T ss_pred CCHHHHHHHH
Confidence 5555444444
No 307
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=31.65 E-value=51 Score=29.53 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=45.9
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCC--CcchHHHHccceEEEecCCChhHHHHHHHHHHHH
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSL--DALPHIIISRCQKFFFPKMKDADIIYTLQWIASK 598 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~--dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakk 598 (1152)
..+.+||+| +.+-..+....+.++-+.. +++.||+.|... +....++..-+..|-.+|++.+++...++...+.
T Consensus 43 ~~~dlil~D-~~mP~~~G~el~~~lr~~~-~~~pvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~ 118 (140)
T d1qkka_ 43 DFAGIVISD-IRMPGMDGLALFRKILALD-PDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEK 118 (140)
T ss_dssp TCCSEEEEE-SCCSSSCHHHHHHHHHHHC-TTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred cCcchHHHh-hccCCCCHHHHHHHHHHhC-CCCcEEEEECCCCHHHHHHHHHcCCCEeecCCCCHHHHHHHHHHHHHH
Confidence 345799999 4433333444444443433 445555655443 3455566666777888999999998888776554
No 308
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=31.48 E-value=13 Score=36.83 Aligned_cols=25 Identities=24% Similarity=0.494 Sum_probs=21.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHHHcc
Q 036794 445 LYVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 445 ~yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
.+-|+|.=|+||||+|-.||..+..
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~ 27 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHA 27 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHT
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHh
Confidence 3567899999999999999998764
No 309
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=31.34 E-value=61 Score=28.27 Aligned_cols=72 Identities=8% Similarity=0.103 Sum_probs=40.9
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEc-CCC-CcchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVS-SSL-DALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaT-N~~-dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
+.+||+|= .+-..+.++.+.++-+.++....+|+.| ... +.....+..-+..|-.+|++.+++...++.++.
T Consensus 48 ~dlillD~-~mP~~dG~e~~~~ir~~~~~~~~ii~~t~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~v~~ 121 (123)
T d1dz3a_ 48 PDILLLDI-IMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYG 121 (123)
T ss_dssp CSEEEEES-CCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHH
T ss_pred CCEEEEcC-CCCCCCHHHHHHHHHhcCCCCCeEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 47999993 3322234443433333344443344433 332 333444555566787888899999998887654
No 310
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.21 E-value=44 Score=29.02 Aligned_cols=70 Identities=9% Similarity=0.084 Sum_probs=41.3
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
+.+||+|= .+-..+.+..+ +.+.+.+ ++.+|+.|...+ ....++..-+..|-.+|++.+++...++.+++
T Consensus 45 ~dlillD~-~mp~~~G~~~~-~~i~~~~-~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~lr 116 (117)
T d2a9pa1 45 PDIIILDL-MLPEIDGLEVA-KTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLR 116 (117)
T ss_dssp CSEEEECS-SCSSSCHHHHH-HHHHTTC-CCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEecc-ccCCCCccHHH-HHHHhCC-CCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhC
Confidence 47999993 32223344433 3444432 344555554433 23344555566788889999999998887654
No 311
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.93 E-value=45 Score=29.19 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=44.5
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCC--CCcchHHHHccceEEEecCCChhHHHHHHHHHHHHcC
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSS--LDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKEG 600 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~--~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakkeG 600 (1152)
.+.+||+|- .+-..+.++.+ +.+.+...++.+|+.|.. .+....++..-+..|-.+|++.+++...++.++++.|
T Consensus 45 ~~dlvl~D~-~mP~~~G~el~-~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~rrG 121 (121)
T d1ys7a2 45 RPDAIVLDI-NMPVLDGVSVV-TALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG 121 (121)
T ss_dssp CCSEEEEES-SCSSSCHHHHH-HHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEe-eccCcccHHHH-HHHHhcCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 357999994 22222333333 333333344555555543 3333444555566788899999999999988877654
No 312
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=30.87 E-value=68 Score=28.09 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=47.5
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhh--CCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHHHc
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDR--APRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIASKE 599 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEe--pp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakke 599 (1152)
.+.+||+|= .+-..+.+ .|++.+.. ...++.||+.|...+ ....++..-...|-.+|++..++...|..++++.
T Consensus 49 ~~dlii~D~-~mP~~dG~-el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~l~~~l~r~ 126 (128)
T d1jbea_ 49 GYGFVISDW-NMPNMDGL-ELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL 126 (128)
T ss_dssp CCCEEEEES-CCSSSCHH-HHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-ccccCCHH-HHHHHHHhCccCCCCcEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 457999983 32222333 44444433 234565666665443 3444555556678889999999999999988876
Q ss_pred CC
Q 036794 600 GI 601 (1152)
Q Consensus 600 Gl 601 (1152)
|+
T Consensus 127 ~~ 128 (128)
T d1jbea_ 127 GM 128 (128)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 313
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=30.72 E-value=14 Score=39.32 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=25.5
Q ss_pred cCcccC----cHHHHHHH----HHHHHhCCCCcEEEEEcCCCchHHHHH
Q 036794 420 FRDLVG----QNLVAQAL----SNAVMRRKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 420 FddLVG----Qe~v~q~L----k~aL~~gri~~~yLL~GPpGTGKTtlA 460 (1152)
|+.+.+ |+.+.+.+ ...+-.| ...+++-||+.|+|||.+.
T Consensus 84 FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G-~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 84 FDFAFDETASNEVVYRFTARPLVQTIFEG-GKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp CSEEECTTCCHHHHHHHTTHHHHHHHHTT-CEEEEEEEESTTSSHHHHH
T ss_pred CCeecCCCCCHHHHHHHHHHHHHHHHHhc-cCceEEeeccCCCCCceee
Confidence 555554 66665442 2333334 3446888999999999876
No 314
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=30.59 E-value=19 Score=35.37 Aligned_cols=41 Identities=17% Similarity=0.346 Sum_probs=31.4
Q ss_pred ceEEEEeCCCC-CCHHHHHHHHHHHhhCCCC-EEEEEEcCCCC
Q 036794 525 YRIFVFDDCDT-LSPDSWSAISKVVDRAPRR-VVFILVSSSLD 565 (1152)
Q Consensus 525 ~kVVIIDEID~-Ls~eaqnaLLklLEepp~~-VifILaTN~~d 565 (1152)
..+++|||++. |++..+..|.++|.+.... .-||++|.++.
T Consensus 303 ~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~ 345 (369)
T g1ii8.1 303 ISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE 345 (369)
T ss_dssp CSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGG
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHH
Confidence 46999999975 6888888898888874332 26778888876
No 315
>d2r9ga1 a.80.1.2 (A:238-423) Uncharacterized protein EfaeDRAFT_0938 {Enterococcus faecium [TaxId: 1352]}
Probab=30.31 E-value=36 Score=33.03 Aligned_cols=40 Identities=13% Similarity=0.221 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 036794 651 EKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLAT 691 (1152)
Q Consensus 651 e~ifdLldAils~d~~~ALk~L~~LL~~G~dPl~ILs~La~ 691 (1152)
+.+..+.+.+-..|++.|+.+|-+|+..| ||..|...|..
T Consensus 5 d~iSA~~KSiRgSD~daAly~larml~~G-d~~~i~RRL~~ 44 (186)
T d2r9ga1 5 DVISAFQKSIRGSDVDAALHYLARLVEAG-DLASICRRLMV 44 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHT-CHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHhHHHHHHHHHHHcC-CchHHHHHHHH
Confidence 45667788888999999999999999999 88876665443
No 316
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=29.36 E-value=17 Score=38.07 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=23.1
Q ss_pred CcHHHHHH----HHHHHHhCCCCcEEEEEcCCCchHHHHH
Q 036794 425 GQNLVAQA----LSNAVMRRKVGLLYVFYGPHGTGKTSCA 460 (1152)
Q Consensus 425 GQe~v~q~----Lk~aL~~gri~~~yLL~GPpGTGKTtlA 460 (1152)
.|+++.+. |...+-.|. ..+++-||+.|+|||.+.
T Consensus 66 sQ~~vy~~~~~plv~~~l~G~-n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 66 SQKQVYRDIGEEMLQHAFEGY-NVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp CHHHHHHHTHHHHHHHHHTTC-CEEEEEECSTTSSHHHHH
T ss_pred cHHHHHHHhhHHHHHHHHhcc-CceeeeeccCCCCCceee
Confidence 35555543 333334444 357889999999999986
No 317
>d1o6da_ c.116.1.3 (A:) Hypothetical protein TM0844 {Thermotoga maritima [TaxId: 2336]}
Probab=29.01 E-value=1.2e+02 Score=27.65 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=53.7
Q ss_pred ceEEeCCCCCCCHHHHHHHHHHHhhCCCCCCceEEEEeCCCC-CCHHHHHHHHHHHhhCCCCEEEEEEcCCCCcchHHHH
Q 036794 494 NIKEVGPVGNFDFESILDLLDNMVTSRPPSQYRIFVFDDCDT-LSPDSWSAISKVVDRAPRRVVFILVSSSLDALPHIII 572 (1152)
Q Consensus 494 dviEIdaas~~~vdeIreLle~a~~~P~~a~~kVVIIDEID~-Ls~eaqnaLLklLEepp~~VifILaTN~~dkL~~aL~ 572 (1152)
.++++......+.+.+..--..........+..+|++||=+. ++...+..+++-......++.||+- .++-+.+.++
T Consensus 33 ~iielk~~~~~~~~~~~~~E~~~il~~i~~~~~~I~LDe~Gk~~sS~~fA~~l~~~~~~g~~i~FiIG--Ga~Gl~~~~~ 110 (147)
T d1o6da_ 33 EVLEIKRVHRGSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKGKDITILIG--GPYGLNEEIF 110 (147)
T ss_dssp EEEEECCCCCSCHHHHHHHHHHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHTCCEEEEEC--CTTCCCGGGG
T ss_pred eEEEeccccCCCHHHHHHHHHHHHhccCCCCCEEEEEecccCCcCCHHHHHHHHHHHhcCCCCEEEEE--CCCCCCHHHH
Confidence 355665444455554433222211222234456899999765 5666777666555544466666654 3344666788
Q ss_pred ccce-EEEecCCChhH
Q 036794 573 SRCQ-KFFFPKMKDAD 587 (1152)
Q Consensus 573 SR~q-vI~F~~p~~~E 587 (1152)
.++. .+.|.+++-..
T Consensus 111 ~~a~~~lSls~mT~pH 126 (147)
T d1o6da_ 111 AKAHRVFSLSKMTFTH 126 (147)
T ss_dssp GGCSEEEECCSSCCCH
T ss_pred HhcCcEEeCCcCcchH
Confidence 8887 58899988543
No 318
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]}
Probab=28.94 E-value=2.6e+02 Score=27.37 Aligned_cols=169 Identities=17% Similarity=0.182 Sum_probs=97.3
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCCCCceEEEEe---CCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCCc---chHHHHc
Q 036794 500 PVGNFDFESILDLLDNMVTSRPPSQYRIFVFD---DCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLDA---LPHIIIS 573 (1152)
Q Consensus 500 aas~~~vdeIreLle~a~~~P~~a~~kVVIID---EID~Ls~eaqnaLLklLEepp~~VifILaTN~~dk---L~~aL~S 573 (1152)
..+..+.+.++.+++.+... +-.++++.- |...|+.+-...+++..-+....+++.+.++..+. +.....+
T Consensus 13 ~dg~iD~~~~~~~i~~l~~~---Gv~gi~~~GttGE~~~Ls~~Er~~~~~~~~~~~~~~i~gv~~~st~~~i~~a~~a~~ 89 (293)
T d1w3ia_ 13 KDNRIDKEKLKIHAENLIRK---GIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp TTSSBCHHHHHHHHHHHHHT---TCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGG
T ss_pred CCcCCCHHHHHHHHHHHHHc---CCCEEEECeechhhhhCCHHHHHHHHHHHHhhccccccccccchhhhhhhhhhhhhh
Confidence 33557888899998887654 334677766 88888888777777776665555444333333221 1111111
Q ss_pred cce--E-----EEecCCChhHHHHHHHHHHHHc-------------CCCCCHHHHHHHHHh-----cCCCHHHHHHHHHH
Q 036794 574 RCQ--K-----FFFPKMKDADIIYTLQWIASKE-------------GIEIDKDALKLIASR-----SDGSLRDAEMTLEQ 628 (1152)
Q Consensus 574 R~q--v-----I~F~~p~~~EI~eiL~~iakke-------------Gl~Id~dALelLAe~-----s~GDLR~Ain~LEk 628 (1152)
-.. . +.|..++.+++.++.+.+++.- |+.++.+.+..|-.. +.||+.........
T Consensus 90 ~Ga~~~~~~~P~~~~~~~~~~i~~~f~~Ia~a~~~pi~lYn~P~~~g~~l~~~~~~~l~ni~giK~ss~d~~~~~~~~~~ 169 (293)
T d1w3ia_ 90 FDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKEIGCFTGVKDTIENIIHTLDYKRL 169 (293)
T ss_dssp SCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHCCEEEEEECCSCHHHHHHHHHH
T ss_pred hccccccccccchhccchHHHHHHHHHHHHHhhccceeeeccccccccccchhhHHhhhhhhccccccccHHHHHHHHhh
Confidence 111 1 1234567889999999998763 556888777665333 45787765543221
Q ss_pred H---HHh-CCCCCHHHHHHH--------HhccchhhHHHHHHHHHcCCHHHHHHH
Q 036794 629 L---SLL-GQRISVPLVQEL--------VGLISDEKLVDLLDLALSADTVNTVKN 671 (1152)
Q Consensus 629 L---sLl-g~~IT~EdV~el--------Vg~v~ee~ifdLldAils~d~~~ALk~ 671 (1152)
- ..+ +..-..-....+ +.....+...++.+++.++|.++|.++
T Consensus 170 ~~~~~v~~G~d~~~~~~~~~Ga~G~is~~~n~~P~~~~~l~~~~~~gd~~~A~~l 224 (293)
T d1w3ia_ 170 NPNMLVYSGSDMLIATVASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKL 224 (293)
T ss_dssp CTTSEEEECCSTTHHHHHHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccceecccccccchhhhhccCCceeeecccchhhhhhhhHHHHHHhccHHHHHHH
Confidence 0 011 111111111111 122345677889999999999888754
No 319
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.24 E-value=17 Score=34.60 Aligned_cols=23 Identities=39% Similarity=0.393 Sum_probs=18.8
Q ss_pred EEEcCCCchHHHHHHHHHHHHcc
Q 036794 447 VFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 447 LL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+..|--|+||||+|..+|..+..
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~ 28 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQ 28 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHH
T ss_pred EECCCCCChHHHHHHHHHHHHHh
Confidence 34478999999999999988753
No 320
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=28.04 E-value=53 Score=28.53 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=42.0
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCC--CcchHHHHccceEEEecCCChhHHHHHHHHH
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSL--DALPHIIISRCQKFFFPKMKDADIIYTLQWI 595 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~--dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~i 595 (1152)
+.+||+| +.+-..+..+.+.++-+.. .++.+|+.|... .....++..-...|-.+|++.+++.+.|+++
T Consensus 47 ~dliilD-~~mp~~~G~e~~~~ir~~~-~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~v 117 (118)
T d1u0sy_ 47 PDIVTMD-ITMPEMNGIDAIKEIMKID-PNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 117 (118)
T ss_dssp CSEEEEE-CSCGGGCHHHHHHHHHHHC-TTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEe-cCCCCCCHHHHHHHHHHhC-CCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 4799999 4443334444444443333 344455555433 3344556666677888999999998888764
No 321
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=27.92 E-value=20 Score=34.18 Aligned_cols=26 Identities=31% Similarity=0.363 Sum_probs=20.5
Q ss_pred cEEEEE-cCCCchHHHHHHHHHHHHcc
Q 036794 444 LLYVFY-GPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 444 ~~yLL~-GPpGTGKTtlARaLAkeL~~ 469 (1152)
..+-|+ +--|+||||+|-.||..+..
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~ 29 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGD 29 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHh
Confidence 345566 56899999999999988754
No 322
>d1a5ta1 a.80.1.1 (A:208-330) delta prime subunit {Escherichia coli [TaxId: 562]}
Probab=27.72 E-value=1.1e+02 Score=27.47 Aligned_cols=77 Identities=17% Similarity=0.153 Sum_probs=52.2
Q ss_pred CChHHHHHHHHHHHHHHHhchhhhhcchh---HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHhcc--CCCHHHHHHHHH
Q 036794 680 VEPLALMSQLATVITDILAGSYDFTKDRH---RRKFFRRQPLSKEEMEKLRQALKTLSEAEKQLRM--SNDKLTWLTAAL 754 (1152)
Q Consensus 680 ~dPl~ILs~La~qiRdLL~ak~~~~~g~~---~~~~~~r~~ls~~s~~kL~qaL~~L~eaD~qLK~--s~dprl~LE~lL 754 (1152)
++....+.-|...+.|.+..+.... ... ..... ..-+.+++...|.+.++.+..+-.++.+ +.|+++.|+..+
T Consensus 32 e~~~~~L~WL~~lL~DalK~q~g~~-~~vN~D~~~li-~~la~~~s~~~L~~~~~~~~~~r~~L~~~~~lN~ELlL~~~L 109 (123)
T d1a5ta1 32 EQAPARLHWLATLLMDALKRHHGAA-QVTNVDVPGLV-AELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLL 109 (123)
T ss_dssp TTHHHHHHHHHHHHHHHTCC-------CCCTTCHHHH-HHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCch-hhccHhHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHH
Confidence 4455566677777778777654422 111 00111 1112478999999999999999999998 889999999999
Q ss_pred HHcC
Q 036794 755 LQLA 758 (1152)
Q Consensus 755 LkLa 758 (1152)
+..-
T Consensus 110 l~we 113 (123)
T d1a5ta1 110 LRIE 113 (123)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9984
No 323
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=27.48 E-value=1.8e+02 Score=25.01 Aligned_cols=73 Identities=5% Similarity=0.092 Sum_probs=43.6
Q ss_pred CCceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcC--CCCcchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 523 SQYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSS--SLDALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 523 a~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN--~~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
..+.+||+|- .+-..+.+..+.++-+.++ .+.+|+.|. +.+....++..-...|-.+|++.+++...++..++
T Consensus 45 ~~~dliilD~-~mp~~~G~~~~~~i~~~~~-~~~ii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 119 (128)
T d1yioa2 45 EQHGCLVLDM-RMPGMSGIELQEQLTAISD-GIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ 119 (128)
T ss_dssp TSCEEEEEES-CCSSSCHHHHHHHHHHTTC-CCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cCCCEeehhh-hcccchhHHHHHHHHhhCC-CCeEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4568999994 3323344444444444433 333333333 33445556666666788899999999888876654
No 324
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=27.44 E-value=80 Score=27.36 Aligned_cols=74 Identities=8% Similarity=0.158 Sum_probs=44.6
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCC--CCcchHHHHccceEEEecCCChhHHHHHHHHHHHHc
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSS--LDALPHIIISRCQKFFFPKMKDADIIYTLQWIASKE 599 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~--~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakke 599 (1152)
.+.+||+|= .+-..+.+. +++.+......+.+|+.|.. .+....++..-+..|-.+|++.+++...++..++..
T Consensus 43 ~~dlillD~-~mP~~~G~~-~~~~lr~~~~~~~ii~it~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~r~ 118 (120)
T d1p2fa2 43 AFHVVVLDV-MLPDYSGYE-ICRMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLERE 118 (120)
T ss_dssp CCSEEEEES-BCSSSBHHH-HHHHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeC-cccccchhH-HHHHHhhcCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 457999993 221222343 33344332344455555533 334455566666678899999999999998877653
No 325
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=26.13 E-value=1.6e+02 Score=25.25 Aligned_cols=73 Identities=7% Similarity=0.081 Sum_probs=44.2
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIASK 598 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakk 598 (1152)
.+.+||+|- .+-..+.++. ++.+.....++.+|+.|...+ ....++..-+..|-.+|++.+++...++..+++
T Consensus 44 ~~dliilD~-~mP~~~G~e~-~~~i~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~lrR 118 (119)
T d2pl1a1 44 IPDIAIVDL-GLPDEDGLSL-IRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 (119)
T ss_dssp CCSEEEECS-CCSSSCHHHH-HHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred ccceeehhc-cCCCchhHHH-HHHHHhcCcccceEeeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 457999993 2212234444 444443334555666665443 344455555667888999999999988877653
No 326
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.63 E-value=1.1e+02 Score=26.32 Aligned_cols=71 Identities=4% Similarity=0.118 Sum_probs=43.3
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
.+.+||+| +.+-..+..+ +++.+.+.+ ++.+|+.|...+ .....+..-+..|-.+|++.+++...++..++
T Consensus 46 ~~dlii~D-~~mp~~~G~~-~~~~~r~~~-~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~ 118 (121)
T d1xhfa1 46 DINLVIMD-INLPGKNGLL-LARELREQA-NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 118 (121)
T ss_dssp CCSEEEEC-SSCSSSCHHH-HHHHHHHHC-CCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEee-cccCCccCcH-HHHHHHhcC-CCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 45799998 3332223333 444444433 455566555433 23444555566788899999999998887664
No 327
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.50 E-value=51 Score=28.63 Aligned_cols=72 Identities=8% Similarity=0.049 Sum_probs=41.7
Q ss_pred ceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCC-CCcchHHHHccceEEEecCCChhHHHHHHHHHHHH
Q 036794 525 YRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSS-LDALPHIIISRCQKFFFPKMKDADIIYTLQWIASK 598 (1152)
Q Consensus 525 ~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~-~dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakk 598 (1152)
+.+||+|- .+-..+.++ +++.+.+.+...++++++.. .+....++..-+..|-.+|++.+++...++..+++
T Consensus 45 ~dliilD~-~mP~~~G~e-~~~~ir~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrr 117 (119)
T d1zh2a1 45 PDLIILDL-GLPDGDGIE-FIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR 117 (119)
T ss_dssp CSEEEEES-EETTEEHHH-HHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEEecc-ccCCCCCch-HHHHHHhccCCcEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHhh
Confidence 47999993 221222333 44444443333333333332 23344556666677888999999999988877654
No 328
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.29 E-value=2.1e+02 Score=25.92 Aligned_cols=71 Identities=10% Similarity=0.097 Sum_probs=44.6
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCC--CcchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSL--DALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~--dkL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
.+.+||+| ++ |+......+.+...+.| ++.||+.|... +....++..-+..|-.+|++..++...|.....
T Consensus 51 ~~Dlvl~D-~~-mp~~~~~~~~~~~~~~p-~~pvI~lta~~~~~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~~ 123 (189)
T d1qo0d_ 51 PVDVVFTS-IF-QNRHHDEIAALLAAGTP-RTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARR 123 (189)
T ss_dssp CCSEEEEE-CC-SSTHHHHHHHHHHHSCT-TCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred CCCEEEEc-CC-CCCcHHHHHHHHHHcCC-CCCEEEEeccchHHHHHHHHHcCCcEEEEecchhhHHHHHHhhccc
Confidence 45799998 54 45444445555555543 34455555443 345555666666788899999999888876544
No 329
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=25.26 E-value=19 Score=36.02 Aligned_cols=24 Identities=29% Similarity=0.490 Sum_probs=20.0
Q ss_pred EEEEcCCCchHHHHHHHHHHHHcc
Q 036794 446 YVFYGPHGTGKTSCARIFARALNC 469 (1152)
Q Consensus 446 yLL~GPpGTGKTtlARaLAkeL~~ 469 (1152)
+.++|.=|+||||+|--||..+..
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~ 28 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAE 28 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 457999999999999888887753
No 330
>d1mkna_ g.5.1.1 (A:) Midkine, a heparin-binding growth factor, N-terminal domain {Synthetic}
Probab=24.75 E-value=10 Score=30.35 Aligned_cols=12 Identities=42% Similarity=1.162 Sum_probs=9.4
Q ss_pred CCccCcccccCc
Q 036794 277 RNGCGIPWNWSR 288 (1152)
Q Consensus 277 ~~~cg~p~~w~~ 288 (1152)
..-|-|||||-+
T Consensus 45 ~~kCkiPCnwkK 56 (59)
T d1mkna_ 45 RIRCRVPCNWKK 56 (59)
T ss_dssp EECCCBCCCSSS
T ss_pred eeeeecCccccc
Confidence 456999999953
No 331
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=24.43 E-value=1.2e+02 Score=26.78 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=42.5
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
.+.+||+|- .+-..+.. .+++.+.+..+++.||+.|...+ ....++..-+..|-.+|.+.+++...+....+
T Consensus 44 ~~dlvilD~-~mp~~~G~-e~~~~lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 117 (137)
T d1ny5a1 44 HFNVVLLDL-LLPDVNGL-EILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIE 117 (137)
T ss_dssp CCSEEEEES-BCSSSBHH-HHHHHHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHH
T ss_pred ccccchHHH-hhhhhhHH-HHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 458999993 22222333 34444444334555666665433 34445555556777889999998888876554
No 332
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=24.25 E-value=1.5e+02 Score=25.50 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=44.2
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIAS 597 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iak 597 (1152)
.+.++|+|= .+-..+.. .+++.+.+..+++.+|+.|...+ ....++..-+..|-.+|++.+++...+++..+
T Consensus 47 ~~dlvi~D~-~mp~~~G~-e~~~~lr~~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~e 120 (123)
T d1dbwa_ 47 RNGVLVTDL-RMPDMSGV-ELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASE 120 (123)
T ss_dssp CSEEEEEEC-CSTTSCHH-HHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred CCcEEEEec-cCccccch-HHHHHHHhcCCCCeEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 458999993 22222233 34444444344555666665443 34555666666788899999999988887654
No 333
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=22.74 E-value=40 Score=28.34 Aligned_cols=57 Identities=9% Similarity=0.004 Sum_probs=41.6
Q ss_pred HHHHHHHHcCCC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC--CCCHHHHHHHHhc
Q 036794 591 TLQWIASKEGIE-IDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ--RISVPLVQELVGL 647 (1152)
Q Consensus 591 iL~~iakkeGl~-Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~--~IT~EdV~elVg~ 647 (1152)
.++.+++.-|+. +++++.+.|.....--++++......++..++ +|+.+||.-++..
T Consensus 14 ~i~Riar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr 73 (82)
T d2huec1 14 AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 73 (82)
T ss_dssp HHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 445667777886 89999999888766566666666666665555 4999999887753
No 334
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=22.14 E-value=92 Score=24.61 Aligned_cols=54 Identities=13% Similarity=0.050 Sum_probs=37.4
Q ss_pred HHHHHHcCC-CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCC--CCCHHHHHHHHh
Q 036794 593 QWIASKEGI-EIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQ--RISVPLVQELVG 646 (1152)
Q Consensus 593 ~~iakkeGl-~Id~dALelLAe~s~GDLR~Ain~LEkLsLlg~--~IT~EdV~elVg 646 (1152)
+++++.-|. .++.++...+...+.--+..+.......+..++ +|+.+||..++.
T Consensus 10 ~ri~k~~~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk 66 (68)
T d1htaa_ 10 GRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARK 66 (68)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HHHHHHCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHH
Confidence 333443333 589999999998876656666666666655544 599999998764
No 335
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.96 E-value=1.9e+02 Score=24.56 Aligned_cols=72 Identities=8% Similarity=0.140 Sum_probs=43.2
Q ss_pred CceEEEEeCCCCCCHHHHHHHHHHHhhCCCCEEEEEEcCCCC--cchHHHHccceEEEecCCChhHHHHHHHHHHHH
Q 036794 524 QYRIFVFDDCDTLSPDSWSAISKVVDRAPRRVVFILVSSSLD--ALPHIIISRCQKFFFPKMKDADIIYTLQWIASK 598 (1152)
Q Consensus 524 ~~kVVIIDEID~Ls~eaqnaLLklLEepp~~VifILaTN~~d--kL~~aL~SR~qvI~F~~p~~~EI~eiL~~iakk 598 (1152)
.+.+|++|- .+-..+.. .+++.+...+ .+.+|+.|...+ ....++..-+..|-.+|++.+++...++..+++
T Consensus 45 ~~dliilD~-~mp~~~g~-~~~~~~~~~~-~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrR 118 (120)
T d1zgza1 45 SVDLILLDI-NLPDENGL-MLTRALRERS-TVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 118 (120)
T ss_dssp CCSEEEEES-CCSSSCHH-HHHHHHHTTC-CCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEeeeh-hhccchhH-HHHHHHhccC-CCeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 457999984 22222333 3445565543 344555554433 233445555667888999999999888877654
No 336
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.45 E-value=3.8e+02 Score=26.20 Aligned_cols=169 Identities=17% Similarity=0.206 Sum_probs=100.7
Q ss_pred CCCCCHHHHHHHHHHHhhCCCCCCceEEEE---eCCCCCCHHHHHHHHHHHh-hCCCCEEEEEEcCCCCcchHH--HHcc
Q 036794 501 VGNFDFESILDLLDNMVTSRPPSQYRIFVF---DDCDTLSPDSWSAISKVVD-RAPRRVVFILVSSSLDALPHI--IISR 574 (1152)
Q Consensus 501 as~~~vdeIreLle~a~~~P~~a~~kVVII---DEID~Ls~eaqnaLLklLE-epp~~VifILaTN~~dkL~~a--L~SR 574 (1152)
.+..+.+.++.+++.+... +-.++++. =|+..|+.+....+++..- ....++.+|+-+.... +..+ +...
T Consensus 22 dg~iD~~~l~~~i~~li~~---Gv~Gi~v~G~tGE~~~Ls~eEr~~l~~~~~~~~~~~~~vi~g~~~~s-~~~~i~~a~~ 97 (296)
T d1xxxa1 22 DGSLDTATAARLANHLVDQ---GCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYD-TAHSIRLAKA 97 (296)
T ss_dssp TSCBCHHHHHHHHHHHHHT---TCSEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSC-HHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHHHHc---CCCEEEECeeccchhhCCHHHHHHHHHHHHHHhccccceEeccccch-hHHHHHHHHH
Confidence 3457888899998887654 22356554 5888899887777766643 3445666666655443 1111 1111
Q ss_pred -----ce--EEE---ecCCChhHHHHHHHHHHHHc-------------CCCCCHHHHHHHHHh--------cCCCHHHHH
Q 036794 575 -----CQ--KFF---FPKMKDADIIYTLQWIASKE-------------GIEIDKDALKLIASR--------SDGSLRDAE 623 (1152)
Q Consensus 575 -----~q--vI~---F~~p~~~EI~eiL~~iakke-------------Gl~Id~dALelLAe~--------s~GDLR~Ai 623 (1152)
+. .+. +..++.+++.++.+.+++.- |..++++.+..|+.. +.||+....
T Consensus 98 a~~~Gad~v~i~~P~~~~~~~~~l~~~~~~v~~~~~~pi~lYn~p~~~g~~~~~~~~~~L~~~p~i~giK~~s~d~~~~~ 177 (296)
T d1xxxa1 98 CAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVKDAKADLHSGA 177 (296)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECSCCHHHHH
T ss_pred HHHhcCCeEEEEeccCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCHHHHHHhcCCCCeeeeccccccHHHHH
Confidence 11 121 22357889999999998753 556899999999765 458888776
Q ss_pred HHHHHHHHh---CCCCCHHHHHHH-Hh---------ccchhhHHHHHHHHHcCCHHHHHHHHHHH
Q 036794 624 MTLEQLSLL---GQRISVPLVQEL-VG---------LISDEKLVDLLDLALSADTVNTVKNLRVI 675 (1152)
Q Consensus 624 n~LEkLsLl---g~~IT~EdV~el-Vg---------~v~ee~ifdLldAils~d~~~ALk~L~~L 675 (1152)
..+..-.+. +.. .-.+..+ .| ....+.+.++.+++.++|.++|.++-..+
T Consensus 178 ~~~~~~~~~~~~g~~--~~~~~~~~~G~~G~is~~~n~~P~~~~~i~~~~~~gd~~~A~~l~~~l 240 (296)
T d1xxxa1 178 QIMADTGLAYYSGDD--ALNLPWLAMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAV 240 (296)
T ss_dssp HHHHHHCCEEEECSG--GGHHHHHHHTCCEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcccccccccCcc--cccchhhhcccccccchhccchhHHHHHHHhhccchhHHHHHHHHHHH
Confidence 655432111 111 0111111 11 12234566788888999999887654443
Done!