BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036810
VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK
YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD
KGYKVSSYLPLVPTERIAKVFSNGVVESQPLASAGHEADVVVH

High Scoring Gene Products

Symbol, full name Information P value
AT3G05500 protein from Arabidopsis thaliana 3.1e-51
AT2G47780 protein from Arabidopsis thaliana 1.3e-15
AT1G67360 protein from Arabidopsis thaliana 5.5e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036810
        (163 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079782 - symbol:AT3G05500 species:3702 "Arabi...   532  3.1e-51   1
TAIR|locus:2043373 - symbol:AT2G47780 "AT2G47780" species...   196  1.3e-15   1
TAIR|locus:2019579 - symbol:AT1G67360 species:3702 "Arabi...   118  5.5e-07   1


>TAIR|locus:2079782 [details] [associations]
            symbol:AT3G05500 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
            [GO:0010200 "response to chitin" evidence=RCA] GO:GO:0005773
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC009606
            HOGENOM:HOG000029051 ProtClustDB:CLSN2681981 InterPro:IPR008802
            Pfam:PF05755 EMBL:AY052683 EMBL:AY063733 EMBL:AY085141
            IPI:IPI00536435 RefSeq:NP_187201.1 UniGene:At.25126 PaxDb:Q9MA63
            PRIDE:Q9MA63 EnsemblPlants:AT3G05500.1 GeneID:819715
            KEGG:ath:AT3G05500 TAIR:At3g05500 eggNOG:NOG288606
            InParanoid:Q9MA63 OMA:KAEQCAV PhylomeDB:Q9MA63
            Genevestigator:Q9MA63 GermOnline:AT3G05500 Uniprot:Q9MA63
        Length = 246

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 103/151 (68%), Positives = 125/151 (82%)

Query:     1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
             VD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV  TASGMAKSVY+K
Sbjct:    90 VDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSK 149

Query:    61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAD 120
             YEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLF            +CSEKYN TVV AA+
Sbjct:   150 YEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAE 209

Query:   121 KGYKVSSYLPLVPTERIAKVFSNGVVESQPL 151
             KGY+V+SY+PLVPTERI+K+F+    E++PL
Sbjct:   210 KGYRVTSYMPLVPTERISKIFAEEKAETEPL 240


>TAIR|locus:2043373 [details] [associations]
            symbol:AT2G47780 "AT2G47780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009062 "fatty acid catabolic process"
            evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005309
            HOGENOM:HOG000029051 ProtClustDB:CLSN2681981 InterPro:IPR008802
            Pfam:PF05755 EMBL:BT000468 EMBL:BT002146 IPI:IPI00541771 PIR:D84919
            RefSeq:NP_182299.1 UniGene:At.48607 UniGene:At.70188
            EnsemblPlants:AT2G47780.1 GeneID:819390 KEGG:ath:AT2G47780
            TAIR:At2g47780 eggNOG:NOG268959 InParanoid:O82246 OMA:VKQASSQ
            PhylomeDB:O82246 Genevestigator:O82246 GermOnline:AT2G47780
            Uniprot:O82246
        Length = 235

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 49/133 (36%), Positives = 66/133 (49%)

Query:     8 LDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKE 67
             +D +V  V   V     S  + A   A +VA+EV+  GV  T   +A+SV  KYEPAA  
Sbjct:   105 VDRKVDDVFFDVETYVPSLVKQASSQALTVATEVQRTGVVDTTKSIARSVRDKYEPAA-- 162

Query:    68 LYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAADKGYKVSS 127
                      E YA + WR LNQ+PLF            Y SEKYN  V    D+ Y  + 
Sbjct:   163 ---------EYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAE 213

Query:   128 YLPLVPTERIAKV 140
             YLP++P E+I+ +
Sbjct:   214 YLPMIPIEKISDI 226


>TAIR|locus:2019579 [details] [associations]
            symbol:AT1G67360 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005773
            EMBL:AC002130 EMBL:AY050911 EMBL:AY091413 EMBL:AY136297
            EMBL:BT000410 EMBL:AY085233 IPI:IPI00533352 PIR:A96697
            RefSeq:NP_176904.1 RefSeq:NP_849856.1 UniGene:At.24217
            UniGene:At.35662 IntAct:Q9FYF7 STRING:Q9FYF7 PaxDb:Q9FYF7
            PRIDE:Q9FYF7 EnsemblPlants:AT1G67360.1 EnsemblPlants:AT1G67360.2
            GeneID:843057 KEGG:ath:AT1G67360 TAIR:At1g67360 eggNOG:NOG313747
            HOGENOM:HOG000029051 InParanoid:Q9FYF7 OMA:DEHAPPM PhylomeDB:Q9FYF7
            ProtClustDB:CLSN2681981 Genevestigator:Q9FYF7 GermOnline:AT1G67360
            InterPro:IPR008802 Pfam:PF05755 Uniprot:Q9FYF7
        Length = 240

 Score = 118 (46.6 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 42/141 (29%), Positives = 56/141 (39%)

Query:     1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
             V E   K D   PP+ K+V  QA      A   A+S   E +T G         K+ +  
Sbjct:    81 VGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG--------PKAAFN- 131

Query:    61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAD 120
             Y  AA E    Y+      +V  W KLNQ                + S +YN  V    +
Sbjct:   132 Y--AATE----YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTN 185

Query:   121 KGYKVSSYLPLVPTERIAKVF 141
              GY +  YLPLVP + I K +
Sbjct:   186 MGYSLVGYLPLVPVDDIVKAY 206


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.124   0.344    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      163       151   0.00097  104 3  11 23  0.39    32
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  128 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.89u 0.16s 13.05t   Elapsed:  00:00:00
  Total cpu time:  12.89u 0.16s 13.05t   Elapsed:  00:00:00
  Start:  Fri May 10 07:35:11 2013   End:  Fri May 10 07:35:11 2013

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