BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036810
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MA63|Y3550_ARATH REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana
GN=At3g05500 PE=2 SV=1
Length = 246
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 136/151 (90%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
VD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV TASGMAKSVY+K
Sbjct: 90 VDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSK 149
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
YEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLFP++AQV VPTAA+CSEKYN TVV AA+
Sbjct: 150 YEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAE 209
Query: 121 KGYKVSSYLPLVPTERIAKVFSNGVVESQPL 151
KGY+V+SY+PLVPTERI+K+F+ E++PL
Sbjct: 210 KGYRVTSYMPLVPTERISKIFAEEKAETEPL 240
>sp|Q9SW70|SRP_VITRI Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1
Length = 248
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 113/144 (78%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
V+ S+ +L+ VP ++K+ QA++ AQ AP +A +VASEV+ GV TA + K+VY+K
Sbjct: 88 VEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSK 147
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
EP AKEL SKYEP AEQYAVSAWR LN++PLFPQVAQVVVPTAAY SEKYNQ+V A+
Sbjct: 148 CEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAE 207
Query: 121 KGYKVSSYLPLVPTERIAKVFSNG 144
+GY V+ YLPL+PTERIAKVF +G
Sbjct: 208 RGYTVALYLPLIPTERIAKVFQDG 231
>sp|O82803|SRPP_HEVBR Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1
SV=1
Length = 204
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 91/143 (63%), Gaps = 15/143 (10%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
VD SVT LD VPPV+KQV AQ S AQ AP + VAS V GV
Sbjct: 74 VDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV-------------- 119
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
+ AK LY+ EPKAEQYAV WR LN++PL PQVA VVVPTA Y SEKYN V +
Sbjct: 120 -QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTE 178
Query: 121 KGYKVSSYLPLVPTERIAKVFSN 143
+GY+VSSYLPL+PTE+I KVF +
Sbjct: 179 QGYRVSSYLPLLPTEKITKVFGD 201
>sp|Q41112|SRP_PHAVU Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1
Length = 167
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 96/143 (67%), Gaps = 26/143 (18%)
Query: 2 DESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKY 61
D V +LD VP +K+V +QA RSV SEV+ GV S AK+VY
Sbjct: 51 DRKVGELDRHVPSNVKKVSSQA-----------RSVVSEVRRDGV----STFAKTVY--- 92
Query: 62 EPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAADK 121
SKYEP AEQ AVSAWRKLNQ+PLFPQVA V+P AAYC+EKYN+ +VS+A+K
Sbjct: 93 --------SKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEK 144
Query: 122 GYKVSSYLPLVPTERIAKVFSNG 144
GY+VS+YLPLVPTE+IAKVFS
Sbjct: 145 GYRVSAYLPLVPTEKIAKVFSGN 167
>sp|A2Y0H2|Y5513_ORYSI REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica
GN=OsI_017815 PE=2 SV=1
Length = 253
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 11/142 (7%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
V ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS +
Sbjct: 103 VGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIAR 151
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
EP A++LY++YEP AE+ A AW LN++PL P V + V+P AA S +YN V A
Sbjct: 152 AEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAK 211
Query: 121 KGYKVSSYLPLVPTERIAKVFS 142
+G V++YLPLVPTER+++VF
Sbjct: 212 RGSAVATYLPLVPTERLSRVFG 233
>sp|Q9FRA7|Y5513_ORYSJ REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa
subsp. japonica GN=Os05g0151300 PE=2 SV=2
Length = 253
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 11/142 (7%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
V ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS +
Sbjct: 103 VGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIAR 151
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
EP A++LY++YEP AE+ A AW LN++PL P V + V+P AA S +YN V A
Sbjct: 152 AEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAK 211
Query: 121 KGYKVSSYLPLVPTERIAKVFS 142
+G V++YLPLVPTER+++VF
Sbjct: 212 RGSAVATYLPLVPTERLSRVFG 233
>sp|O82246|Y2778_ARATH REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana
GN=At2g47780 PE=2 SV=1
Length = 235
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 22/144 (15%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
VD+ ++ VP ++KQ +QAL+ VA+EV+ GV T +A+SV K
Sbjct: 109 VDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVDTTKSIARSVRDK 157
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAAD 120
YEPA AE YA + WR LNQ+PLFP+VA +V+PTA Y SEKYN V D
Sbjct: 158 YEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGD 206
Query: 121 KGYKVSSYLPLVPTERIAKVFSNG 144
+ Y + YLP++P E+I+ +
Sbjct: 207 RDYFGAEYLPMIPIEKISDILEQD 230
>sp|Q9FYF7|Y1736_ARATH REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana
GN=At1g67360 PE=2 SV=1
Length = 240
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 1 VDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTK 60
V E K D PP+ K+V QA A A+S E +T G
Sbjct: 81 VGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG--------------- 125
Query: 61 YEPAAKELY--SKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSA 118
P A Y ++Y+ +V W KLNQ + +P AA+ S +YN V
Sbjct: 126 --PKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDM 183
Query: 119 ADKGYKVSSYLPLVPTERIAKVF 141
+ GY + YLPLVP + I K +
Sbjct: 184 TNMGYSLVGYLPLVPVDDIVKAY 206
>sp|P15252|REF_HEVBR Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2
Length = 138
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 4 SVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEV 41
SVT +D +PP++K Q +SA + AP ARS+AS +
Sbjct: 86 SVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSL 123
>sp|Q06998|VP2_BTV3V Outer capsid protein VP2 OS=Bluetongue virus 3 (isolate South
Africa vaccine) GN=S2 PE=3 SV=1
Length = 959
Score = 33.5 bits (75), Expect = 0.62, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 62 EPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAADK 121
EPA K ++ +YE + Y+VS K NQ L+P ++ T + ++Y + + S D
Sbjct: 419 EPATKVIHWEYELISPTYSVSN-HKGNQCDLYPDDVEI---TTKFNEDRYREMIQSVIDD 474
Query: 122 GY 123
G+
Sbjct: 475 GW 476
>sp|Q9A4D0|Y2906_CAUCR UPF0276 protein CC_2906 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=CC_2906 PE=3 SV=2
Length = 280
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 96 VAQVVVPTAAYCSEKYNQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASAG 155
+A++ T Y N VSA++ G+ YL VP +R+ ++ G + + L
Sbjct: 161 LAEMCARTGCYLLLDINNIYVSASNHGFDPYEYLAAVPVDRVLQIHLAGHSQGRELLIDT 220
Query: 156 HE 157
H+
Sbjct: 221 HD 222
>sp|A5VEM2|Y4400_SPHWW UPF0276 protein Swit_4400 OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=Swit_4400 PE=3 SV=1
Length = 278
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 112 NQTVVSAADKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASAGHE 157
N VSA++ G+ +YL +P +R+A++ G + + L H+
Sbjct: 177 NNIYVSASNHGFDAQAYLAGIPADRVAQIHLAGHSQGRTLLIDTHD 222
>sp|Q053M9|DXR_LEPBL 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain L550) GN=dxr
PE=3 SV=1
Length = 389
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 47 AGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPL-FP 94
AG A G A ++ AA EL+ K E + + W L++MP+ FP
Sbjct: 312 AGKAGGTAPCIFNAANEAAVELFLKDEIRFTEIPDYIWYTLDEMPIDFP 360
>sp|Q04U66|DXR_LEPBJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
GN=dxr PE=3 SV=1
Length = 389
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 47 AGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPL-FP 94
AG A G A ++ AA EL+ K E + + W L++MP+ FP
Sbjct: 312 AGKAGGTAPCIFNAANEAAVELFLKDEIRFTEIPDYIWYTLDEMPIDFP 360
>sp|Q5AH25|EXO70_CANAL Exocyst complex protein EXO70 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=EXO70 PE=3 SV=1
Length = 667
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 121 KGYKVSSYLPLVPTERIAKVFSNGVVESQPLASAGHEADVVVH 163
K Y + +L P R VFS+ + SQP A++ E D V+
Sbjct: 388 KNYSIGQWLVSQPPMRFVNVFSSVIPNSQPQANSDGEEDEVIQ 430
>sp|A1S556|Y1305_SHEAM UPF0276 protein Sama_1305 OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=Sama_1305 PE=3 SV=1
Length = 278
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 112 NQTVVSAADKGYKVSSYLPLVPTERIAKVFSNG-VVESQPLASAGHEADVV 161
N V++ + Y ++YL +PTERI + G VE+ L H AD+V
Sbjct: 173 NNIYVNSINHNYDAAAYLAAMPTERIRYLHVAGHYVEAPDLIVDTHGADIV 223
>sp|Q5RF65|GBA3_PONAB Cytosolic beta-glucosidase OS=Pongo abelii GN=GBA3 PE=2 SV=1
Length = 469
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 8 LDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYT----KYEP 63
+D P ++K A ++S Q P +E + + GTA A YT KY+
Sbjct: 260 IDGDYPEIVKSQIA-SMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQE 318
Query: 64 AAK-ELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAADKG 122
K EL + + E + +W+ ++ + + P + ++ Y + YN V+ + G
Sbjct: 319 NKKGELGILQDAEIEFFPDPSWKNVDWIYVVPWGVRKLL---KYIKDTYNNPVIYITENG 375
Query: 123 YKVSSYLPLVPTER 136
+ S PL T+R
Sbjct: 376 FPQSDPAPLDDTQR 389
>sp|Q9H227|GBA3_HUMAN Cytosolic beta-glucosidase OS=Homo sapiens GN=GBA3 PE=1 SV=2
Length = 469
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 8 LDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYT----KYEP 63
+D P V+K A ++S Q P +E + + GTA A YT KY+
Sbjct: 260 IDGDYPEVVKSQIA-SMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQE 318
Query: 64 AAK-ELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAAYCSEKYNQTVVSAADKG 122
K EL + + E + +W+ ++ + + P V Y + YN V+ + G
Sbjct: 319 NKKGELGILQDAEIEFFPDPSWKNVDWIYVVPWG---VCKLLKYIKDTYNNPVIYITENG 375
Query: 123 YKVSSYLPLVPTER 136
+ S PL T+R
Sbjct: 376 FPQSDPAPLDDTQR 389
>sp|Q7MSI8|Y399_WOLSU UPF0306 protein WS0399 OS=Wolinella succinogenes (strain ATCC 29543
/ DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=WS0399
PE=3 SV=1
Length = 139
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 26 AAQMAPVVARSVASEVKTAGVAGTASGMA-KSVYTKYEPAAKELYSKYEPKAEQYAVSAW 84
A P +A SVA E K+ G+ G+ + ++ +P A+ELY K P A W
Sbjct: 54 GALQEPRIAGSVALETKSVGLI---QGLQFEGIWKSEDPKARELYFKTFPLARALFPVLW 110
Query: 85 R 85
R
Sbjct: 111 R 111
>sp|Q0C161|SYM_HYPNA Methionine--tRNA ligase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=metG PE=3 SV=1
Length = 579
Score = 29.6 bits (65), Expect = 8.7, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 6 TKLDCRVPPVLKQVPAQALSAAQMAPVVARSV----ASEVKTAGVAGTASGMAKSVY-TK 60
+K + ++P A+A A ++A + R + A E + A A A + Y TK
Sbjct: 415 SKFEGKIPETGTSGDAEAWMANELAERLPRLIEFYEAMEFRKAAAETRAIWAAGNEYLTK 474
Query: 61 YEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPQVAQVVVPTAA 105
EP + KY+ + AV +N +F +AQ ++P AA
Sbjct: 475 AEP-----WVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAA 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.124 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,201,199
Number of Sequences: 539616
Number of extensions: 1843086
Number of successful extensions: 4655
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4627
Number of HSP's gapped (non-prelim): 29
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)