Query         036812
Match_columns 499
No_of_seqs    185 out of 1816
Neff          10.8
Searched_HMMs 46136
Date          Fri Mar 29 05:44:59 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036812.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036812hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.6E-86 3.4E-91  642.7  46.4  465    4-492    21-488 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-79 3.1E-84  618.0  46.8  479    6-497    54-539 (543)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 3.5E-80 7.5E-85  588.8  39.4  462    4-492    27-499 (499)
  4 PLN00110 flavonoid 3',5'-hydro 100.0 2.7E-79 5.8E-84  610.4  46.7  474    6-497    28-502 (504)
  5 PLN03112 cytochrome P450 famil 100.0 5.3E-79 1.2E-83  613.2  48.9  482    5-498    28-514 (514)
  6 PLN03234 cytochrome P450 83B1; 100.0 1.2E-78 2.6E-83  608.9  47.6  471    4-491    23-498 (499)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 1.3E-78 2.8E-83  609.2  47.4  475    9-498    34-515 (517)
  8 PLN02394 trans-cinnamate 4-mon 100.0 1.4E-77 2.9E-82  601.9  47.4  473    4-492    25-502 (503)
  9 PLN02183 ferulate 5-hydroxylas 100.0   2E-77 4.2E-82  600.5  45.7  466    5-491    32-511 (516)
 10 PLN00168 Cytochrome P450; Prov 100.0 5.4E-77 1.2E-81  597.8  47.5  475    6-493    32-518 (519)
 11 PLN02966 cytochrome P450 83A1  100.0 1.5E-76 3.3E-81  592.6  47.6  464    6-488    26-496 (502)
 12 KOG0159 Cytochrome P450 CYP11/ 100.0 3.7E-77 7.9E-82  554.2  39.6  460    9-492    50-518 (519)
 13 PTZ00404 cytochrome P450; Prov 100.0 8.5E-77 1.8E-81  592.9  43.5  456    6-491    26-482 (482)
 14 PLN02655 ent-kaurene oxidase   100.0 1.5E-76 3.2E-81  587.2  44.1  461   11-493     1-465 (466)
 15 PLN02290 cytokinin trans-hydro 100.0 2.2E-75 4.8E-80  587.2  42.0  456    7-493    40-516 (516)
 16 PLN03018 homomethionine N-hydr 100.0   4E-74 8.7E-79  574.0  47.9  479    8-497    39-529 (534)
 17 PLN02500 cytochrome P450 90B1  100.0 1.9E-73 4.1E-78  569.1  41.5  442    6-490    35-488 (490)
 18 PF00067 p450:  Cytochrome P450 100.0 1.4E-74   3E-79  578.3  32.9  456   11-488     1-463 (463)
 19 PLN02738 carotene beta-ring hy 100.0 6.8E-73 1.5E-77  570.9  44.0  449   21-494   143-597 (633)
 20 KOG0157 Cytochrome P450 CYP4/C 100.0 1.2E-73 2.5E-78  565.0  37.3  456    8-492    34-496 (497)
 21 PLN02169 fatty acid (omega-1)- 100.0   1E-72 2.3E-77  561.9  42.5  455   10-491    32-499 (500)
 22 PLN03195 fatty acid omega-hydr 100.0 5.5E-72 1.2E-76  562.2  40.4  464    4-492    25-516 (516)
 23 PLN02774 brassinosteroid-6-oxi 100.0 9.2E-72   2E-76  552.5  39.8  434    3-490    25-462 (463)
 24 PLN02936 epsilon-ring hydroxyl 100.0 3.8E-71 8.2E-76  550.9  42.5  462    8-495    11-485 (489)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 3.8E-71 8.1E-76  546.9  41.4  440    5-492     3-450 (452)
 26 PLN02196 abscisic acid 8'-hydr 100.0 2.9E-70 6.4E-75  541.2  37.3  427    7-491    33-462 (463)
 27 PLN02302 ent-kaurenoic acid ox 100.0 1.9E-68 4.1E-73  535.4  42.6  441    7-493    40-489 (490)
 28 PLN02987 Cytochrome P450, fami 100.0 2.8E-68 6.1E-73  525.1  40.8  437    7-492    28-469 (472)
 29 PLN02426 cytochrome P450, fami 100.0   3E-67 6.6E-72  521.8  41.5  443   16-493    48-501 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 4.6E-65 9.9E-70  461.5  32.6  445    9-492    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 4.1E-60 8.9E-65  463.4  29.6  414    7-466    15-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.8E-55 8.3E-60  423.7  34.7  383   33-491    24-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  73.5     2.1 4.6E-05   28.3   1.3    8  407-414    44-51  (59)
 34 PF12554 MOZART1:  Mitotic-spin  59.7      29 0.00063   21.9   4.3   43  284-326     5-47  (48)
 35 PF09201 SRX:  SRX;  InterPro:   49.8      13 0.00029   29.2   2.1   24  435-458    18-41  (148)
 36 PF05952 ComX:  Bacillus compet  45.8      18 0.00039   23.8   1.9   24  307-330     4-27  (57)
 37 KOG0114 Predicted RNA-binding   35.5 1.2E+02  0.0026   22.9   5.0   58   10-72     13-76  (124)
 38 PRK06789 flagellar motor switc  34.9      34 0.00073   24.0   2.0   39  351-389    22-62  (74)
 39 PF12508 DUF3714:  Protein of u  32.5      32  0.0007   29.6   2.0   43  344-388    52-94  (200)
 40 PF14129 DUF4296:  Domain of un  31.8 1.4E+02   0.003   21.7   5.0   49  282-330    30-78  (87)
 41 PHA03162 hypothetical protein;  29.0      33 0.00071   26.8   1.3   28  431-458     2-29  (135)
 42 PF09926 DUF2158:  Uncharacteri  29.0      54  0.0012   21.3   2.1   18   44-61      3-20  (53)
 43 PF13893 RRM_5:  RNA recognitio  26.6 1.8E+02  0.0038   18.6   4.5   34   38-71      2-39  (56)
 44 KOG3506 40S ribosomal protein   25.1      33 0.00072   22.1   0.6   10  429-438    13-22  (56)
 45 PF13625 Helicase_C_3:  Helicas  23.3 1.6E+02  0.0035   23.2   4.5   41   31-73     74-114 (129)
 46 PRK13467 F0F1 ATP synthase sub  22.9 2.6E+02  0.0056   19.2   4.7   25  302-326    20-44  (66)
 47 PF11227 DUF3025:  Protein of u  22.7      42 0.00091   29.0   1.0   23  388-410   188-211 (212)
 48 PF14483 Cut8_M:  Cut8 dimerisa  22.3 1.2E+02  0.0026   18.1   2.6   12  313-324    24-35  (38)
 49 COG1759 5-formaminoimidazole-4  21.1 1.8E+02  0.0039   27.1   4.6   71  346-451   274-351 (361)
 50 PRK05933 type III secretion sy  20.2      73  0.0016   29.5   2.0   44  346-389   316-362 (372)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.6e-86  Score=642.70  Aligned_cols=465  Identities=43%  Similarity=0.728  Sum_probs=408.2

Q ss_pred             ccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCc-
Q 036812            4 MIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPK-   82 (499)
Q Consensus         4 ~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~-   82 (499)
                      +++++++||||+++|++||++++..  ..+|+.+.+|.++|||+|.+++|..++|||+|+++++|++++++..|++|+. 
T Consensus        21 ~~~~~~lPPGP~~lPiIGnl~~l~~--~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   21 YRKRRNLPPGPPPLPIIGNLHQLGS--LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             ccCCCCCCcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            3455789999999999999999985  2489999999999999999999999999999999999999999999999997 


Q ss_pred             chhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHH
Q 036812           83 TAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLED  162 (499)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~  162 (499)
                      ......+.+++.+++++.+|+.|+.+||+....+|+...+++....-.++++.+++.+...  . .++  +||+...+..
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~--~-~~~--~vdl~~~l~~  173 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKS--K-KGE--PVDLSELLDL  173 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhc--C-CCc--eeeHHHHHHH
Confidence            2344666667778999999999999999999899999999998888899999999988762  2 225  8999999999


Q ss_pred             HHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccc-hhhhhc-hhhHHHHHHHHHHHHHHHHHH
Q 036812          163 MTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALP-FFWWLD-WQGHEMAMKKTAKELDAILEG  240 (499)
Q Consensus       163 ~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~l~~~~~~  240 (499)
                      ++.++|++++||.++ ...   ++++..++...+.+.....+.+...+++| +++++. ..+..+........+..++++
T Consensus       174 ~~~nvI~~~~fG~rf-~~~---~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~  249 (489)
T KOG0156|consen  174 LVGNVICRMLFGRRF-EEE---DEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLER  249 (489)
T ss_pred             HHHHHHHHHHhCCcc-ccC---CchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999 442   34555678999999998888888889999 666664 335667777777779999999


Q ss_pred             HHHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHH
Q 036812          241 WLEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLK  320 (499)
Q Consensus       241 ~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~  320 (499)
                      +|+++++.. ..   ++. .|++|.|++..+++...   .+|+++|...+.++++||+|||++++.|++.+|++||++|+
T Consensus       250 ~i~eh~~~~-~~---~~~-~D~vD~lL~~~~~~~~~---~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~  321 (489)
T KOG0156|consen  250 IIDEHREKI-GD---EEG-RDFVDALLKLMKEEKAE---GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQK  321 (489)
T ss_pred             HHHHHHhhh-cc---CCC-CcHHHHHHHhhcccccC---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHH
Confidence            999998765 21   233 79999999976654211   38999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC
Q 036812          321 KAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVW  400 (499)
Q Consensus       321 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~  400 (499)
                      |+++||++++|.++.++.+|+.+||||+|||+|++|++|++|+.++|.+.+|+.|+||.|||||.|+++.|++||||++|
T Consensus       322 K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw  401 (489)
T KOG0156|consen  322 KLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVW  401 (489)
T ss_pred             HHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccC
Confidence            99999999999888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCccccc
Q 036812          401 KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPK  480 (499)
Q Consensus       401 ~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  480 (499)
                      +||++|+||||++++   +.++....++|||.|+|.|||..+|.+++.++++.+|++|+|+++.+ .+++... +++...
T Consensus       402 ~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~  476 (489)
T KOG0156|consen  402 EDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKK  476 (489)
T ss_pred             CCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceec
Confidence            999999999999874   22346788999999999999999999999999999999999999877 6666655 466667


Q ss_pred             CCCceEEeecCC
Q 036812          481 ATPLEVVLSPRL  492 (499)
Q Consensus       481 ~~~~~~~~~~r~  492 (499)
                      +.++.+...+|.
T Consensus       477 ~~pl~~~~~~r~  488 (489)
T KOG0156|consen  477 KKPLKAVPVPRL  488 (489)
T ss_pred             CCcceeeeecCC
Confidence            788998888874


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-79  Score=617.96  Aligned_cols=479  Identities=28%  Similarity=0.493  Sum_probs=376.2

Q ss_pred             ccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhC-CceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWG-PAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA   84 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG-~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~   84 (499)
                      ++.++||||+++|++||++.+... ...+..+.+|.++|| +++++++|+.++|+|+||+++++++.++...|++++...
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            345789999999999999887531 234678999999999 799999999999999999999999999888888887544


Q ss_pred             hhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHH
Q 036812           85 AAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMT  164 (499)
Q Consensus        85 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~  164 (499)
                      ....++.+..++++..+|+.|+++||++++.+++...++.+.+.+.++++.+++.+...  ..+++  ++|+.+.+..++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~vd~~~~~~~~t  208 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM--VKNSE--PVDLRFVTRHYC  208 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCC--ceehHHHHHHHH
Confidence            43444443334678888999999999998677888778888899999999998887654  34556  799999999999


Q ss_pred             HHHHHHHhccccccCCCCCC-CcHHHHHHHHHHHHHHhhhc---chhhccccchhhhhchhhHHHHHHHHHHHHHHHHHH
Q 036812          165 LNMVVRMVAGKRYFGASATC-DDSEARQCQKAINQFFHLIG---IFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEG  240 (499)
Q Consensus       165 ~d~i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~  240 (499)
                      +|+|+.++||.++ ...... ++....+..+.++..+....   ...+.+++|+++++...+..+......+.+.+++.+
T Consensus       209 ~~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  287 (543)
T PLN02971        209 GNAIKRLMFGTRT-FSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDP  287 (543)
T ss_pred             HHHHHHHHhCCcc-cccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHH
Confidence            9999999999987 331100 01111122233333332211   112345566665542223344555567778888999


Q ss_pred             HHHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHH
Q 036812          241 WLEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLK  320 (499)
Q Consensus       241 ~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~  320 (499)
                      +|+++++..+.+. .... .|+++.|++..+++   +...++++++++++.++++||+|||+++++|++++|++||++|+
T Consensus       288 ~i~~~~~~~~~~~-~~~~-~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~  362 (543)
T PLN02971        288 IIDERIKMWREGK-RTQI-EDFLDIFISIKDEA---GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILH  362 (543)
T ss_pred             HHHHHHHHHhccC-CCCC-cCHHHHHHhhhccc---CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHH
Confidence            9988765433210 0123 69999999865332   11148999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC
Q 036812          321 KAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVW  400 (499)
Q Consensus       321 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~  400 (499)
                      |+++||++++++++.++++++++|||++|||+|+||++|++|+.++|.+.+|++++||.|||||.|.++.|++||||++|
T Consensus       363 kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~  442 (543)
T PLN02971        363 KAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVW  442 (543)
T ss_pred             HHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhC
Confidence            99999999998778899999999999999999999999999987799999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC-CCCCCCCCCcccc
Q 036812          401 KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ-PVDMTESPGLTIP  479 (499)
Q Consensus       401 ~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~  479 (499)
                      +||++|+||||+++........++..++|||+|+|.|+|++||++|++++++.||++|++++.++. .+.+...++ ++-
T Consensus       443 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~  521 (543)
T PLN02971        443 SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMF  521 (543)
T ss_pred             CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-ccc
Confidence            999999999999753211111245689999999999999999999999999999999999987653 455655555 543


Q ss_pred             cCCCceEEeecCCCCC-CC
Q 036812          480 KATPLEVVLSPRLPPN-PY  497 (499)
Q Consensus       480 ~~~~~~~~~~~r~~~~-~~  497 (499)
                      .++++.+.+++| .++ .|
T Consensus       522 ~~~~~~~~~~~~-~~~~~~  539 (543)
T PLN02971        522 LSKPLVMVGELR-LSEDLY  539 (543)
T ss_pred             ccccceeeeeec-CCcccc
Confidence            456999999999 554 55


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.5e-80  Score=588.75  Aligned_cols=462  Identities=23%  Similarity=0.364  Sum_probs=355.8

Q ss_pred             ccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcc
Q 036812            4 MIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKT   83 (499)
Q Consensus         4 ~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~   83 (499)
                      ||+++++ |+|+++|++||+..+.............|. +||+++.++.|.++.++|+||++|++|+.++.++|.++...
T Consensus        27 yw~rrGi-~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~-~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~  104 (499)
T KOG0158|consen   27 YWRRRGI-PGPKPLPFLGNLPGMLKRERPGDLLLDIYT-KYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRP  104 (499)
T ss_pred             hhccCCC-CCCCCCCcEecHHHHHhccCcHHHHHHHHh-cCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCC
Confidence            6666655 577789999999988754223334444444 44999999999999999999999999999999999885411


Q ss_pred             hhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHH
Q 036812           84 AAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDM  163 (499)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~  163 (499)
                      .....-.......+|..+|++||++|..++ |.||+.+++.|.+.+.++++++++.+.++  ...+.  .+++.+.+.++
T Consensus       105 ~~~d~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~--~~~~~--~~~~~dl~~~y  179 (499)
T KOG0158|consen  105 IYGDPEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRK--SEGGQ--EGEIKDLCARY  179 (499)
T ss_pred             CcCCCCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHh--hcccC--CccHHHHHHHH
Confidence            111111011124577888999999999998 99999999999999999999999999986  33333  68999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhh-hcchh----hccccchhhhhchhhHHHHHHHHHHHHHHHH
Q 036812          164 TLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHL-IGIFT----VSDALPFFWWLDWQGHEMAMKKTAKELDAIL  238 (499)
Q Consensus       164 ~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~  238 (499)
                      |.|||++++||.+. ++.   .+.. ..+.......+.. ...+.    ....+|.+....  ..........+.+.+.+
T Consensus       180 T~DVI~~~AfG~~~-~s~---~d~~-~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v  252 (499)
T KOG0158|consen  180 TTDVIGSCAFGLDA-NSL---RDPK-AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLV  252 (499)
T ss_pred             HHHHHhHhhcccch-hhh---cCch-HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHH
Confidence            99999999999999 776   2222 2333323333222 11111    112223221110  00111222334444445


Q ss_pred             HHHHHHHHHhhccCCCCCCchhhHHHHHHHHhhcC--CccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCc
Q 036812          239 EGWLEEHRQRRVSGGIESESEQDFIDVMLSLQEEG--HLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNP  316 (499)
Q Consensus       239 ~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p  316 (499)
                      ...++.|..   .    ...+.|+++.|++++.++  .......+|.+||+++++.+++||.||||++|++++|+||+||
T Consensus       253 ~~~v~~R~~---~----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~P  325 (499)
T KOG0158|consen  253 NSRVEQREK---E----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNP  325 (499)
T ss_pred             HHHHHHHHh---c----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcCh
Confidence            555555521   1    123389999999987531  1111114999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCccccccccccc-ceeeCCCCEEEEehhhhcc
Q 036812          317 NMLKKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVA-GYHIPAGTRLIVNVWKIQR  395 (499)
Q Consensus       317 ~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~-g~~ip~G~~v~~~~~~~~~  395 (499)
                      ++|+|||+||++++.+...+++|.+.+|+||++||+||||+||++|.. .|.+++|++++ ++.||||+.|.++.|++||
T Consensus       326 dvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~  404 (499)
T KOG0158|consen  326 DVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHH  404 (499)
T ss_pred             HHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccC
Confidence            999999999999977644599999999999999999999999999995 99999999999 9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCC-
Q 036812          396 DPRVWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESP-  474 (499)
Q Consensus       396 d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-  474 (499)
                      ||++||||++|+||||.+++.+   ..++..|+|||.|||.|+|.+||.+|+|+.|+.||++|+++..+...+.  ... 
T Consensus       405 Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~~~~  479 (499)
T KOG0158|consen  405 DPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIP--LEGD  479 (499)
T ss_pred             CcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCc--ccCC
Confidence            9999999999999999977521   2477899999999999999999999999999999999999987632222  333 


Q ss_pred             --CcccccCCCceEEeecCC
Q 036812          475 --GLTIPKATPLEVVLSPRL  492 (499)
Q Consensus       475 --~~~~~~~~~~~~~~~~r~  492 (499)
                        +++..|++++++++++|.
T Consensus       480 ~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  480 PKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccceeeecCCceEEEEEeCC
Confidence              677889999999999985


No 4  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.7e-79  Score=610.41  Aligned_cols=474  Identities=36%  Similarity=0.653  Sum_probs=383.6

Q ss_pred             ccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchh
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA   85 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~   85 (499)
                      +..++||||+++|++||++.+.   ..++..+.+|+++||++|++++|+.+.|+|+||+++++++.++...|++++....
T Consensus        28 ~~~~~pPgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~  104 (504)
T PLN00110         28 PSRKLPPGPRGWPLLGALPLLG---NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG  104 (504)
T ss_pred             ccCCCcccCCCCCeeechhhcC---CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence            4568899999999999998775   4578999999999999999999999999999999999999988778887765432


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ......+..+++++.+|+.|+++|+.++..+|+.++++.+.+.+.++++.+++.+...  ..+|+  ++|+.+++..+++
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~--~~~g~--~~~~~~~~~~~~~  180 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL--SQRGE--PVVVPEMLTFSMA  180 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh--ccCCC--cEeHHHHHHHHHH
Confidence            2222222235677888999999999998568999999999999999999999998765  44566  8999999999999


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEH  245 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  245 (499)
                      |+|+.++||.++++.    .+.+...+...+...........+...+|++.++......+...+..+.+.+++.+.++++
T Consensus       181 ~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  256 (504)
T PLN00110        181 NMIGQVILSRRVFET----KGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEH  256 (504)
T ss_pred             HHHHHHHhCCccccc----CchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987222    1222345666666555433332334556766554322334556667778888888888887


Q ss_pred             HHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHH
Q 036812          246 RQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEE  325 (499)
Q Consensus       246 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~E  325 (499)
                      .+.....   ... .|+++.|++.....  ++. .++++++.++++++++||+|||+++++|++++|++||++|+|+++|
T Consensus       257 ~~~~~~~---~~~-~d~l~~ll~~~~~~--~~~-~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~E  329 (504)
T PLN00110        257 TASAHER---KGN-PDFLDVVMANQENS--TGE-KLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEE  329 (504)
T ss_pred             Hhhcccc---ccC-CChhhHHhhccccc--CCC-CCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            6543221   123 69999999754321  122 6899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCC
Q 036812          326 LDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPSA  405 (499)
Q Consensus       326 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~  405 (499)
                      ++++++..+.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus       330 i~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~  409 (504)
T PLN00110        330 MDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEE  409 (504)
T ss_pred             HHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCccc
Confidence            99998876778999999999999999999999999998779999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC-CccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCc
Q 036812          406 FQPERFLTSHTDV-DFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPL  484 (499)
Q Consensus       406 F~P~R~l~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (499)
                      |+||||+++.... ........++|||+|+|.|+|++||++|++++++.|+++|++++.++.+++.....++++.|+.++
T Consensus       410 F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (504)
T PLN00110        410 FRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPL  489 (504)
T ss_pred             CCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCc
Confidence            9999999653211 111123579999999999999999999999999999999999987765544444456777788999


Q ss_pred             eEEeecCCCCCCC
Q 036812          485 EVVLSPRLPPNPY  497 (499)
Q Consensus       485 ~~~~~~r~~~~~~  497 (499)
                      ++++++|..-.-|
T Consensus       490 ~~~~~~r~~~~~~  502 (504)
T PLN00110        490 SAMVTPRLHQSAY  502 (504)
T ss_pred             eEeeccCCCchhc
Confidence            9999999643444


No 5  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.3e-79  Score=613.20  Aligned_cols=482  Identities=35%  Similarity=0.666  Sum_probs=386.4

Q ss_pred             cccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch
Q 036812            5 IQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA   84 (499)
Q Consensus         5 ~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~   84 (499)
                      +++.+.||||+++|++||++.+.   ..++..+.+|+++||++|++++|+.++|+++||+++++++.++.+.|++++...
T Consensus        28 ~~~~~~ppgp~~~pl~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~  104 (514)
T PLN03112         28 RKSLRLPPGPPRWPIVGNLLQLG---PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL  104 (514)
T ss_pred             cCCCCCccCCCCCCeeeeHHhcC---CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence            45668899999999999998875   567899999999999999999999999999999999999988877887766543


Q ss_pred             hhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHH
Q 036812           85 AAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMT  164 (499)
Q Consensus        85 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~  164 (499)
                      .......+...+++..+|+.|+.+|+++..++|+.++++.+.+.+.++++.+++.+.+.  ..+|+  ++|+.+.+..++
T Consensus       105 ~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~--~~~~~--~vd~~~~~~~~~  180 (514)
T PLN03112        105 AAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEA--AQTGK--PVNLREVLGAFS  180 (514)
T ss_pred             cceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHh--hccCC--eeeHHHHHHHHH
Confidence            22221222224567788999999999976578999999999999999999999988765  34566  899999999999


Q ss_pred             HHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          165 LNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       165 ~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      +|+++.++||.++ .........+...+.+.+..++..........++|++.++......++..+..+.+.+++.+.|++
T Consensus       181 ~~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  259 (514)
T PLN03112        181 MNNVTRMLLGKQY-FGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE  259 (514)
T ss_pred             HHHHHHHHcCCcc-ccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987 332111113334566666655543322223345666555433333456667778888888999988


Q ss_pred             HHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHH
Q 036812          245 HRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQE  324 (499)
Q Consensus       245 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~  324 (499)
                      +++..+......+. .|+++.|+++..++  +.. .++++++.++++.+++||+|||+++++|++++|++||++|+|+++
T Consensus       260 ~~~~~~~~~~~~~~-~d~l~~ll~~~~~~--~~~-~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~  335 (514)
T PLN03112        260 HRRARSGKLPGGKD-MDFVDVLLSLPGEN--GKE-HMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQE  335 (514)
T ss_pred             HHHhhcccccCCcc-chHHHHHHHhhccc--ccc-CCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHH
Confidence            76643221001123 69999999865432  111 589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCC
Q 036812          325 ELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPS  404 (499)
Q Consensus       325 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  404 (499)
                      |+++++++++.++++++++||||+|||+|+||++|++++.++|.+.+|+.++||.|||||.|.++.+++||||++|+||+
T Consensus       336 Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~  415 (514)
T PLN03112        336 ELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVE  415 (514)
T ss_pred             HHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChh
Confidence            99999887777999999999999999999999999999876899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC-CCc-cCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC---CCCCCCCCCcccc
Q 036812          405 AFQPERFLTSHTD-VDF-RGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ---PVDMTESPGLTIP  479 (499)
Q Consensus       405 ~F~P~R~l~~~~~-~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~  479 (499)
                      +||||||..+... ... ...+..++|||+|+|.|||++||++|++++++.||++|++++.++.   ++......+++++
T Consensus       416 ~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  495 (514)
T PLN03112        416 EFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMP  495 (514)
T ss_pred             hcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccc
Confidence            9999997653211 111 1234579999999999999999999999999999999999987543   2333334467777


Q ss_pred             cCCCceEEeecCCCCCCCC
Q 036812          480 KATPLEVVLSPRLPPNPYG  498 (499)
Q Consensus       480 ~~~~~~~~~~~r~~~~~~~  498 (499)
                      +.+++++.+.+|..++.||
T Consensus       496 ~~~~~~~~~~~r~~~~~~~  514 (514)
T PLN03112        496 KAKPLRAVATPRLAPHLYG  514 (514)
T ss_pred             cCCCeEEEeecCCcccccC
Confidence            7889999999999999998


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.2e-78  Score=608.93  Aligned_cols=471  Identities=33%  Similarity=0.587  Sum_probs=379.8

Q ss_pred             ccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcc
Q 036812            4 MIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKT   83 (499)
Q Consensus         4 ~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~   83 (499)
                      ++++.+.||||+++|++||+..+..  .+++.++.+|+++||++|++++|+.++|+++||+++++++.++...|..++..
T Consensus        23 ~~~~~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~  100 (499)
T PLN03234         23 TKKSLRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLL  100 (499)
T ss_pred             cCCCCCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            5667788999999999999988753  35678899999999999999999999999999999999999887788777654


Q ss_pred             hhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHH
Q 036812           84 AAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDM  163 (499)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~  163 (499)
                      .........+..+.+...++.|+++|+.+..++|+++++.++.+.+.++++.+++.|.+.  ..+++  ++|+.+.+..+
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~--~vd~~~~~~~~  176 (499)
T PLN03234        101 KGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA--ADQSG--TVDLSELLLSF  176 (499)
T ss_pred             hhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh--ccCCC--eEEHHHHHHHH
Confidence            322222222223446677899999999865589999999999999999999999999765  44555  89999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhc-hhhHHHHHHHHHHHHHHHHHHHH
Q 036812          164 TLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLD-WQGHEMAMKKTAKELDAILEGWL  242 (499)
Q Consensus       164 ~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i  242 (499)
                      ++|+++.++||.++ +..    +.+...+.+.+...............+|++.++. ..+..++..++.+.+.+++.++|
T Consensus       177 t~dvi~~~~fG~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  251 (499)
T PLN03234        177 TNCVVCRQAFGKRY-NEY----GTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELL  251 (499)
T ss_pred             HHHHHHHHHhCCcc-ccc----chhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998 542    2233455555555443332222334456544331 22334567788889999999999


Q ss_pred             HHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHH
Q 036812          243 EEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKA  322 (499)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l  322 (499)
                      +++.+....+   .+. .|+++.|++..+++. ++. .+++++|++++.++++||+|||+++++|++++|++||++|+|+
T Consensus       252 ~~~~~~~~~~---~~~-~d~l~~l~~~~~~~~-~~~-~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl  325 (499)
T PLN03234        252 DETLDPNRPK---QET-ESFIDLLMQIYKDQP-FSI-KFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKA  325 (499)
T ss_pred             HHHHhhcccC---CCc-ccHHHHHHHHhhccC-cCC-CCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence            9876543221   233 799999997654331 112 5899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC-C
Q 036812          323 QEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVW-K  401 (499)
Q Consensus       323 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~  401 (499)
                      ++|+++++++...++++++++|||++|||+|+||++|++|+.++|.+.+|++++||.|||||.|.++.+++||||++| +
T Consensus       326 ~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~  405 (499)
T PLN03234        326 QDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGD  405 (499)
T ss_pred             HHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccC
Confidence            999999998777789999999999999999999999999987689999999999999999999999999999999999 8


Q ss_pred             CCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC---CCCCCCCCCccc
Q 036812          402 NPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ---PVDMTESPGLTI  478 (499)
Q Consensus       402 dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~  478 (499)
                      ||++||||||+++......+.....++|||+|+|.|+|++||++|+++++|.|+++|++++.++.   .+.+....++..
T Consensus       406 ~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  485 (499)
T PLN03234        406 NPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAM  485 (499)
T ss_pred             ChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccc
Confidence            99999999999754221223346789999999999999999999999999999999999987652   234444567777


Q ss_pred             ccCCCceEEeecC
Q 036812          479 PKATPLEVVLSPR  491 (499)
Q Consensus       479 ~~~~~~~~~~~~r  491 (499)
                      .|+..+.+.+++|
T Consensus       486 ~~~~~~~~~~~~~  498 (499)
T PLN03234        486 HKKEHLVLAPTKH  498 (499)
T ss_pred             ccCCCeEEEeecC
Confidence            7777777777665


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.3e-78  Score=609.22  Aligned_cols=475  Identities=40%  Similarity=0.728  Sum_probs=383.2

Q ss_pred             cCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhhhh
Q 036812            9 KAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAAKH   88 (499)
Q Consensus         9 ~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~   88 (499)
                      ++||||+++|++||++.+.   .+++..+.+|+++||++|++++|+.++|+++||+++++++.++...|++++.......
T Consensus        34 ~~pPgp~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQLG---PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCccCCCCCccccHHhcC---CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            4799999999999998886   4678999999999999999999999999999999999999987778887765443333


Q ss_pred             ccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHHH
Q 036812           89 MGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNMV  168 (499)
Q Consensus        89 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~i  168 (499)
                      ++..+.+++++.+|+.|+++||++.+++|+.++++++.+.+.++++.+++.|...  . +++  ++|+.+++..+++|+|
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~-~~~--~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ--H-GTA--PVNLGQLVNVCTTNAL  185 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh--c-CCC--ceeHHHHHHHHHHHHH
Confidence            3333345678888999999999997578999999999999999999999999764  2 355  8999999999999999


Q ss_pred             HHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036812          169 VRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEHRQR  248 (499)
Q Consensus       169 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  248 (499)
                      +.++||.++ ....  .+.....+.+.+...............+|++.++......++..+..+.+.+++.++|+++++.
T Consensus       186 ~~~~fG~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  262 (517)
T PLN02687        186 GRAMVGRRV-FAGD--GDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAA  262 (517)
T ss_pred             HHHHhCccc-cccC--CcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999997 4321  1223345666666555433322233456765555322234556667788889999999988765


Q ss_pred             hccCCCCCCchhhHHHHHHHHhhcCC--ccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHH
Q 036812          249 RVSGGIESESEQDFIDVMLSLQEEGH--LSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEEL  326 (499)
Q Consensus       249 ~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei  326 (499)
                      .+.+  .... .|+++.|++..++..  .++. .++++++++++..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus       263 ~~~~--~~~~-~d~l~~ll~~~~~~~~~~~~~-~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei  338 (517)
T PLN02687        263 GQTG--SEEH-KDLLSTLLALKREQQADGEGG-RITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEEL  338 (517)
T ss_pred             cccc--Cccc-ccHHHHHHHhhcccccccccc-CCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            4321  0123 799999998654310  0122 68999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 036812          327 DQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPSAF  406 (499)
Q Consensus       327 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  406 (499)
                      +++++.++.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus       339 ~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F  418 (517)
T PLN02687        339 DAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEF  418 (517)
T ss_pred             HHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccC
Confidence            99988777889999999999999999999999999987799999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC--CccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCC---CCCCCCCCcccccC
Q 036812          407 QPERFLTSHTDV--DFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQP---VDMTESPGLTIPKA  481 (499)
Q Consensus       407 ~P~R~l~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~  481 (499)
                      +||||++.....  ....++..++|||+|+|.|+|++||++|++++++.||++|++++.++..   +.+....+++..+.
T Consensus       419 ~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (517)
T PLN02687        419 RPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRA  498 (517)
T ss_pred             CchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecC
Confidence            999999753211  1112456799999999999999999999999999999999999876532   22233345555566


Q ss_pred             CCceEEeecCCCCCCCC
Q 036812          482 TPLEVVLSPRLPPNPYG  498 (499)
Q Consensus       482 ~~~~~~~~~r~~~~~~~  498 (499)
                      .++++++++|.-+.-||
T Consensus       499 ~~~~~~~~~R~~~~~~~  515 (517)
T PLN02687        499 VPLMVHPRPRLLPSAYG  515 (517)
T ss_pred             CCeEEeeccCCChhhcc
Confidence            78999999885455676


No 8  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.4e-77  Score=601.88  Aligned_cols=473  Identities=31%  Similarity=0.512  Sum_probs=362.6

Q ss_pred             ccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcc
Q 036812            4 MIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKT   83 (499)
Q Consensus         4 ~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~   83 (499)
                      .+++.+.||||+++|++||++.+..  ...+..+.+|+++||++|++++|+++.|+|+||+.+++++.++...|.+++..
T Consensus        25 ~~~~~~~pPgp~~~p~~g~l~~~~~--~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~  102 (503)
T PLN02394         25 RGKKLKLPPGPAAVPIFGNWLQVGD--DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRN  102 (503)
T ss_pred             hcCcCCCCcCCCCCCeeeeHHhcCC--CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCc
Confidence            3456678999999999999988763  33578999999999999999999999999999999999998876667666543


Q ss_pred             hhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHH
Q 036812           84 AAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDM  163 (499)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~  163 (499)
                      .....+...+.+.+++.+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.|.+.. ...++  .+|+.+++..+
T Consensus       103 ~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~-~~~~~--~v~~~~~~~~~  179 (503)
T PLN02394        103 VVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANP-EAATE--GVVIRRRLQLM  179 (503)
T ss_pred             chHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhh-hccCC--cEecHHHHHHH
Confidence            3333332223356777889999999999866899999999999999999999999997651 12244  69999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcc--hhhccccchhhhhchhhHHHHHHHHHHHHHH-HHHH
Q 036812          164 TLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGI--FTVSDALPFFWWLDWQGHEMAMKKTAKELDA-ILEG  240 (499)
Q Consensus       164 ~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~-~~~~  240 (499)
                      ++|+++.++||.++ +..   .+.....+.............  ..+...+|++.... ....+........... +...
T Consensus       180 ~~dvi~~~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  254 (503)
T PLN02394        180 MYNIMYRMMFDRRF-ESE---DDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDY  254 (503)
T ss_pred             HHHHHHHHHhCCCc-ccc---cchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998 653   222223333333322222111  11223344433221 1111222222222222 3344


Q ss_pred             HHHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHH
Q 036812          241 WLEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLK  320 (499)
Q Consensus       241 ~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~  320 (499)
                      +++++++..+....+.+...|+++.|+++.+++      .++++++..++.++++||+||||++++|++++|++||++|+
T Consensus       255 ~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~------~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~  328 (503)
T PLN02394        255 FVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG------EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQK  328 (503)
T ss_pred             HHHHHHHHhhhccCCcchhhhHHHHHHhccccC------CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHH
Confidence            566655432110001122379999999876543      68899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC
Q 036812          321 KAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVW  400 (499)
Q Consensus       321 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~  400 (499)
                      ||++||+++.+.+..++++++++||||+|||+|+||++|++|+..+|.+.+|++++||.|||||.|.++.|++||||++|
T Consensus       329 kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~  408 (503)
T PLN02394        329 KLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELW  408 (503)
T ss_pred             HHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccC
Confidence            99999999988666789999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC-CCCCCCCCC-ccc
Q 036812          401 KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ-PVDMTESPG-LTI  478 (499)
Q Consensus       401 ~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~  478 (499)
                      +||++|+||||++++...........++|||+|+|+|+|++||++|+++++|.|+++|++++.++. .+.+....+ +.+
T Consensus       409 ~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  488 (503)
T PLN02394        409 KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSL  488 (503)
T ss_pred             CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceee
Confidence            999999999999754211112245679999999999999999999999999999999999987765 244443343 555


Q ss_pred             ccCCCceEEeecCC
Q 036812          479 PKATPLEVVLSPRL  492 (499)
Q Consensus       479 ~~~~~~~~~~~~r~  492 (499)
                      ..+.++++++.+|+
T Consensus       489 ~~~~~~~~~~~~r~  502 (503)
T PLN02394        489 HIAKHSTVVFKPRS  502 (503)
T ss_pred             ccCCCceEEeecCC
Confidence            35579999999996


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2e-77  Score=600.54  Aligned_cols=466  Identities=36%  Similarity=0.654  Sum_probs=368.7

Q ss_pred             cccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch
Q 036812            5 IQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA   84 (499)
Q Consensus         5 ~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~   84 (499)
                      .++.++||||+++|++||++.+.   ...+..+.+|+++||++|++++|+.++|+|+||+++++++.++...|+.++...
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~  108 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMD---QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI  108 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcC---CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc
Confidence            45568899999999999998775   345778999999999999999999999999999999999998877787776543


Q ss_pred             hhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHH
Q 036812           85 AAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMT  164 (499)
Q Consensus        85 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~  164 (499)
                      .......+...++++.+|+.|+++|+++..++|+.+.++.+.+. .++++.+++.|...    .|+  ++|+.+++..++
T Consensus       109 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~----~~~--~v~~~~~~~~~~  181 (516)
T PLN02183        109 AISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN----IGK--PVNIGELIFTLT  181 (516)
T ss_pred             chhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc----CCC--cEeHHHHHHHHH
Confidence            22222222235678888999999999954489999999988886 56889999988642    366  899999999999


Q ss_pred             HHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          165 LNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       165 ~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      +|++++++||..+ +.    .+   ..+.+.+.........+.....+|++.++.+....++..+..+.+.+++.++|++
T Consensus       182 ~~vi~~~~fG~~~-~~----~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  253 (516)
T PLN02183        182 RNITYRAAFGSSS-NE----GQ---DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDD  253 (516)
T ss_pred             HHHHHhHhhcCcc-cc----hH---HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987 32    11   2445555444433333334456676655422233456666778888888888888


Q ss_pred             HHHhhccCCC---CCCchhhHHHHHHHHhhcCC--------ccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHh
Q 036812          245 HRQRRVSGGI---ESESEQDFIDVMLSLQEEGH--------LSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLL  313 (499)
Q Consensus       245 ~~~~~~~~~~---~~~~~~dll~~ll~~~~~~~--------~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~  313 (499)
                      +.+....+..   ......|+++.|+++..+..        .++. .++++++++++.++++||+|||+++++|++++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~-~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La  332 (516)
T PLN02183        254 HIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSI-KLTRDNIKAIIMDVMFGGTETVASAIEWAMAELM  332 (516)
T ss_pred             HHHhhcccccccccccccccHHHHHHHhhhccccccccccccccC-CCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHH
Confidence            7654322100   01122689999998543210        0112 5899999999999999999999999999999999


Q ss_pred             cCchhHHHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhh
Q 036812          314 NNPNMLKKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKI  393 (499)
Q Consensus       314 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~  393 (499)
                      +||++|+|+++|++++++.++.++++++++||||+|||+|+||++|++|+. .|.+.+|++++||.|||||.|.++.|++
T Consensus       333 ~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~  411 (516)
T PLN02183        333 KSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAI  411 (516)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhh
Confidence            999999999999999988666789999999999999999999999999997 6999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCC---CCC
Q 036812          394 QRDPRVWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQP---VDM  470 (499)
Q Consensus       394 ~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~  470 (499)
                      ||||++|+||++|+||||++++.. +...++..|+|||.|+|+|+|++||++|+++++|.|+++|++++.++..   ...
T Consensus       412 hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~  490 (516)
T PLN02183        412 GRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDM  490 (516)
T ss_pred             cCCccccCCccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCCh
Confidence            999999999999999999965321 1123456899999999999999999999999999999999999876532   222


Q ss_pred             CCCCCcccccCCCceEEeecC
Q 036812          471 TESPGLTIPKATPLEVVLSPR  491 (499)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~~~r  491 (499)
                      ...++.+.++..++++.+++|
T Consensus       491 ~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        491 NDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             hhccccccccCCCcEEEeecC
Confidence            233455544566888888888


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=5.4e-77  Score=597.76  Aligned_cols=475  Identities=24%  Similarity=0.421  Sum_probs=370.2

Q ss_pred             ccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchh
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA   85 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~   85 (499)
                      +++++||||+++|++||++.+......++..+.+|+++||++|++++|+.+.|+|+||+++++++.++...|+.++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            45578999999999999986642224578899999999999999999999999999999999999988788887765443


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ...++.+...+.+..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.|.+.  ...++  .+|+.+.+..++.
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~--~v~~~~~~~~~~~  187 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRRE--AEDAA--APRVVETFQYAMF  187 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCC--CcCHHHHHHHHHH
Confidence            3344432223333478999999998544589999999999999999999999999765  34444  6899999999999


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhh-cchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLI-GIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      ++++.++||.++ +.      .....+........... ....+...+|++.+.......++..++.+.+.+++.++|++
T Consensus       188 ~ii~~~~fG~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  260 (519)
T PLN00168        188 CLLVLMCFGERL-DE------PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDA  260 (519)
T ss_pred             HHHHHHHcCCCc-Ch------hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998 32      22222333333222111 11223345564432211122345556778899999999998


Q ss_pred             HHHhhcc----CCCCC---CchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCch
Q 036812          245 HRQRRVS----GGIES---ESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPN  317 (499)
Q Consensus       245 ~~~~~~~----~~~~~---~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~  317 (499)
                      +++....    +....   ....|+++.|++...++. ++. .++++++++++.++++||+|||+++++|++++|++||+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~-~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~  338 (519)
T PLN00168        261 RREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPED-GDR-ALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPS  338 (519)
T ss_pred             HHHHhhhccccCccccccccccccHHHHHHhhhcccc-ccC-CCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHH
Confidence            7654311    00000   112689999998653221 122 69999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhCC-CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccC
Q 036812          318 MLKKAQEELDQQIGM-DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRD  396 (499)
Q Consensus       318 ~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d  396 (499)
                      +|+|+++|+++++++ .+.++++++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++|||
T Consensus       339 ~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d  418 (519)
T PLN00168        339 IQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRD  418 (519)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcC
Confidence            999999999999875 3678999999999999999999999999998879999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC--Ccc-CCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 036812          397 PRVWKNPSAFQPERFLTSHTDV--DFR-GQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTES  473 (499)
Q Consensus       397 ~~~~~dp~~F~P~R~l~~~~~~--~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  473 (499)
                      |++|+||++|+||||+++....  +.. .+...++|||.|+|+|||++||++|++++++.||++|+|++.++.+++....
T Consensus       419 ~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  498 (519)
T PLN00168        419 EREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEK  498 (519)
T ss_pred             ccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhh
Confidence            9999999999999999743111  111 2345799999999999999999999999999999999999876544433323


Q ss_pred             CCcccccCCCceEEeecCCC
Q 036812          474 PGLTIPKATPLEVVLSPRLP  493 (499)
Q Consensus       474 ~~~~~~~~~~~~~~~~~r~~  493 (499)
                      .+++..+++++++++++|+.
T Consensus       499 ~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        499 REFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             ceeEEeecCCcEEEEEeccC
Confidence            34555567789999999873


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.5e-76  Score=592.65  Aligned_cols=464  Identities=32%  Similarity=0.581  Sum_probs=361.9

Q ss_pred             ccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchh
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA   85 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~   85 (499)
                      ++.++||||+++|++||++.+..  .+++..+.+|+++||++|++++|+.++|+|+||+++++++.++...|.+++....
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQK--LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCC--CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            44578999999999999988753  4678899999999999999999999999999999999999987666765543322


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ......+.....+..+|+.|+.+|+.+..++|+.++++.+.+.+.++++.+++.|.+.  ...++  ++|+.+++..+++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~--~vdl~~~~~~~t~  179 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKA--ADKSE--VVDISELMLTFTN  179 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCC--ceeHHHHHHHHHH
Confidence            2222222223446667999999999954589999999999999999999999999765  44565  7999999999999


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhc-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLD-WQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      |+|+.++||.++ +..    +++...+.+.+...............+|++..+. +.+..+......+.+.+++.+.+++
T Consensus       180 dvi~~~~fG~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  254 (502)
T PLN02966        180 SVVCRQAFGKKY-NED----GEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNE  254 (502)
T ss_pred             HHHHHHHhCCcc-Ccc----chHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998 653    2333455555555443333222334455433221 1111233334555667777777776


Q ss_pred             HHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHH
Q 036812          245 HRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQE  324 (499)
Q Consensus       245 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~  324 (499)
                      +.......   .+. .|+++.|++..+++.. +. .++++++.++++++++||+|||+++++|++++|++||++|+|+++
T Consensus       255 ~~~~~~~~---~~~-~~~l~~l~~~~~~~~~-~~-~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~  328 (502)
T PLN02966        255 TLDPKRVK---PET-ESMIDLLMEIYKEQPF-AS-EFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQA  328 (502)
T ss_pred             HHhccccc---ccc-ccHHHHHHHHHhccCc-CC-CCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHH
Confidence            65432211   123 6899999986544311 12 589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCC--CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC-C
Q 036812          325 ELDQQIGM--DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVW-K  401 (499)
Q Consensus       325 Ei~~~~~~--~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~  401 (499)
                      |+++++++  ++.++++++++||||+|||+|+||++|++|+.++|.+.+|++++||.|||||.|.++.|++||||++| +
T Consensus       329 Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        329 EVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             HHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccC
Confidence            99999864  24579999999999999999999999999987789999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC---CCCCCCCCCccc
Q 036812          402 NPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ---PVDMTESPGLTI  478 (499)
Q Consensus       402 dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~  478 (499)
                      ||++|+||||++++.  .....+..++|||+|+|+|+|++||++|+++++|.||++|+|++.++.   .+.+....++..
T Consensus       409 dP~~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~  486 (502)
T PLN02966        409 NPDEFRPERFLEKEV--DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAM  486 (502)
T ss_pred             ChhhCChhhhcCCCC--CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeee
Confidence            999999999996532  112245689999999999999999999999999999999999987663   233344446655


Q ss_pred             ccCCCceEEe
Q 036812          479 PKATPLEVVL  488 (499)
Q Consensus       479 ~~~~~~~~~~  488 (499)
                      .++..++++.
T Consensus       487 ~~~~~~~~~~  496 (502)
T PLN02966        487 HKSQHLKLVP  496 (502)
T ss_pred             ccCCCeEEEE
Confidence            4444454433


No 12 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-77  Score=554.18  Aligned_cols=460  Identities=25%  Similarity=0.370  Sum_probs=390.2

Q ss_pred             cCCCCCccccccccccccCCC-CCchhHHHHHHHhhhCCceEEe-cCCccEEEecCHHHHHHHHHhccccccCCC-c---
Q 036812            9 KAPEPAGAWPIIGHLHLLGGG-DQLLYRTLGAMADKWGPAFNIR-LGSRSAFVVSSWEVVKECFTINDKALASRP-K---   82 (499)
Q Consensus         9 ~~~PgP~~~p~lG~~~~l~~~-~~~~~~~~~~~~~~yG~v~~i~-~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~-~---   82 (499)
                      ..+|||+++|++|.++..... ....|+....++++||+||+.. +|+...|++.||++++.+|+.+ +.++.|+ .   
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccch
Confidence            347999999999999954322 3668999999999999999999 8999999999999999999987 4456664 1   


Q ss_pred             chhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhC-CCCceeehHHHHH
Q 036812           83 TAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNN-SRPVLVELKKWLE  161 (499)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~-g~~~~vdl~~~~~  161 (499)
                      +...+.+ +++..+++..+|++|.+.|..+++..++++.++.+.+.+++.+++++++++..  .+. ....+.|+.+.+.
T Consensus       129 w~~~rd~-~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~--r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  129 WVAYRDF-RGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQ--RDPERGELVPDFAQELY  205 (519)
T ss_pred             hhhhHHh-hccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHH--hcccccccchhHHHHHH
Confidence            1122222 22335678888999999999999889999999999999999999999999987  331 2234899999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHH
Q 036812          162 DMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGW  241 (499)
Q Consensus       162 ~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  241 (499)
                      +++++.|+.++||.++ |++..+.+++.+.+.+++..++.....   ..+.|-++.+..++.++++.++.+.+.++..++
T Consensus       206 ~wslEsi~~V~l~~rl-G~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~  281 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRL-GLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKY  281 (519)
T ss_pred             HHHHHHHHHHHHhccc-ccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999 999877778888999999998875433   334565555556778899999999999999999


Q ss_pred             HHHHHHhhccCCCC-CCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHH
Q 036812          242 LEEHRQRRVSGGIE-SESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLK  320 (499)
Q Consensus       242 i~~~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~  320 (499)
                      |++..++....... .+....++..|..+          .++.+++..++++++.||.|||+++++|+||+|++||++|+
T Consensus       282 Id~~l~~l~~~~~~~~~~~~~l~~~L~~~----------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~  351 (519)
T KOG0159|consen  282 IDNALEELEKQDSAGSEYTGSLLELLLRK----------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQ  351 (519)
T ss_pred             HHHHHHHHHhccccccchhHHHHHHHHHc----------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHH
Confidence            99988775543111 12212344444432          67889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCC-CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCC
Q 036812          321 KAQEELDQQIGM-DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRV  399 (499)
Q Consensus       321 ~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~  399 (499)
                      +|++|+.++.++ +..++.+++.++|||.||||||+||||.+|+. .|...+|..++||.|||||.|.++++.+.+||++
T Consensus       352 ~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~  430 (519)
T KOG0159|consen  352 RLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAY  430 (519)
T ss_pred             HHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhh
Confidence            999999999887 57889999999999999999999999999998 9999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccc
Q 036812          400 WKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIP  479 (499)
Q Consensus       400 ~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  479 (499)
                      |++|++|+|||||+++.   ...++..++|||.|+|+|+|++||.+|+.+.||.++++|+++..++.++.+  ...++..
T Consensus       431 F~~p~~F~PeRWL~~~~---~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~--~~~~il~  505 (519)
T KOG0159|consen  431 FPDPEEFLPERWLKPST---KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEY--VYRFILV  505 (519)
T ss_pred             CCCccccChhhhccccc---CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccc--eeEEEEc
Confidence            99999999999998752   334789999999999999999999999999999999999999988655544  4466677


Q ss_pred             cCCCceEEeecCC
Q 036812          480 KATPLEVVLSPRL  492 (499)
Q Consensus       480 ~~~~~~~~~~~r~  492 (499)
                      |..++++++++|.
T Consensus       506 P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  506 PNRPLRFKFRPRN  518 (519)
T ss_pred             CCCCcceeeeeCC
Confidence            8899999999985


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=8.5e-77  Score=592.94  Aligned_cols=456  Identities=25%  Similarity=0.410  Sum_probs=359.0

Q ss_pred             ccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchh
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA   85 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~   85 (499)
                      ++++.+|||+++|++||+..+.   .+++..+.+|+++||++|++++|+.++|+++||+++++++.++...|..++....
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQLG---NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhhc---ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            3456789999999999998886   4679999999999999999999999999999999999999887666766654332


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ...... +. .+++.+|+.|+++|++++ ++|+.++++.+.+.+.++++.+++.|.+.  .+.|+  .+|+.+++..+++
T Consensus       103 ~~~~~~-~~-~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~--~vd~~~~~~~~~~  175 (482)
T PTZ00404        103 IKHGTF-YH-GIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKI--ESSGE--TFEPRYYLTKFTM  175 (482)
T ss_pred             eeeecc-CC-ceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHH--HhcCC--ccCHHHHHHHHHH
Confidence            211111 22 355678999999999998 89999999999999999999999999765  44565  7999999999999


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEH  245 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  245 (499)
                      |+++.++||.++ +..+...++....+.+.+..++...........++++..+. ........+..+.+.+++.+.++++
T Consensus       176 dvi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~  253 (482)
T PTZ00404        176 SAMFKYIFNEDI-SFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEH  253 (482)
T ss_pred             HHHHHHHhcccc-ccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987 54211011222455555555554433222222233222111 1111223445666777777777665


Q ss_pred             HHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHH
Q 036812          246 RQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEE  325 (499)
Q Consensus       246 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~E  325 (499)
                      ++....    ... .|+++.|+++..+.  +   ..+.+++++++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       254 ~~~~~~----~~~-~dll~~ll~~~~~~--~---~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~E  323 (482)
T PTZ00404        254 LKTIDP----EVP-RDLLDLLIKEYGTN--T---DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNE  323 (482)
T ss_pred             HHccCC----CCc-ccHHHHHHHHhccC--C---cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence            543221    123 79999999864321  1   1223458899999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhccCCCCCCCCC
Q 036812          326 LDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTV-AGYHIPAGTRLIVNVWKIQRDPRVWKNPS  404 (499)
Q Consensus       326 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  404 (499)
                      +++++++...++++++++||||+|||+|+||++|++|..++|.+.+|+++ +||.|||||.|.++.+++||||++|+||+
T Consensus       324 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~  403 (482)
T PTZ00404        324 IKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPE  403 (482)
T ss_pred             HHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCcc
Confidence            99999876678999999999999999999999999998669999999999 99999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCc
Q 036812          405 AFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPL  484 (499)
Q Consensus       405 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (499)
                      +|+||||++..       .+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.++......++++. +.++
T Consensus       404 ~F~PeRwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~  475 (482)
T PTZ00404        404 QFDPSRFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKF  475 (482)
T ss_pred             ccCccccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCc
Confidence            99999999642       346789999999999999999999999999999999999876544333334456655 4689


Q ss_pred             eEEeecC
Q 036812          485 EVVLSPR  491 (499)
Q Consensus       485 ~~~~~~r  491 (499)
                      +|.+++|
T Consensus       476 ~v~~~~R  482 (482)
T PTZ00404        476 KVLLEKR  482 (482)
T ss_pred             eeeeecC
Confidence            9999887


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-76  Score=587.21  Aligned_cols=461  Identities=26%  Similarity=0.443  Sum_probs=366.1

Q ss_pred             CCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhhhhcc
Q 036812           11 PEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAAKHMG   90 (499)
Q Consensus        11 ~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~   90 (499)
                      ||||+++|++||++.+..  .+++..+.+|+++||++|++++|+.++|+|+||+++++++.++...|++++.......++
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~   78 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT   78 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh
Confidence            799999999999988864  457899999999999999999999999999999999999998888887776443333333


Q ss_pred             CCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHHHHH
Q 036812           91 YDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNMVVR  170 (499)
Q Consensus        91 ~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~i~~  170 (499)
                      .++..+.+..+|+.|+++||.+.+++|+...++.+.+.+.+.++.+++.+.+.+....++  ++|+.+.+..+++|+++.
T Consensus        79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHS--PVNFRDVFENELFGLSLI  156 (466)
T ss_pred             cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCC--ceeHHHHHHHHHHHHHHH
Confidence            323234444569999999998877889988889999999999999999887652122355  799999999999999999


Q ss_pred             HhccccccCCCCCCC-cHH---HHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          171 MVAGKRYFGASATCD-DSE---ARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEHR  246 (499)
Q Consensus       171 ~~fG~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  246 (499)
                      ++||.++ +.....+ ...   ...+...+..++.........+.+|+++++......+........+.+++++++++++
T Consensus       157 ~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        157 QALGEDV-ESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHhcccc-ccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987 5431000 000   0123333333433332222345667665553222333344444556678888888777


Q ss_pred             HhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHH
Q 036812          247 QRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEEL  326 (499)
Q Consensus       247 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei  326 (499)
                      +....+   ... .|+++.|++..  .      .++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       236 ~~~~~~---~~~-~d~l~~ll~~~--~------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei  303 (466)
T PLN02655        236 KRIARG---EER-DCYLDFLLSEA--T------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREI  303 (466)
T ss_pred             HhhcCC---CCc-ccHHHHHHhcc--C------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            653332   123 68999999753  1      68999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 036812          327 DQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPSAF  406 (499)
Q Consensus       327 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  406 (499)
                      +++.+++. ++++++++||||+|||+|+||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus       304 ~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F  382 (466)
T PLN02655        304 REVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEW  382 (466)
T ss_pred             HHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhcc
Confidence            99988644 99999999999999999999999999998789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCceE
Q 036812          407 QPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPLEV  486 (499)
Q Consensus       407 ~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (499)
                      +||||+++...   ......++|||+|+|.|||++||..|++++++.||++|++++.++.. +.....+++..+++++.+
T Consensus       383 ~PeR~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~  458 (466)
T PLN02655        383 DPERFLGEKYE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHA  458 (466)
T ss_pred             CccccCCCCcc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEE
Confidence            99999975311   11346789999999999999999999999999999999999876532 223345666778889999


Q ss_pred             EeecCCC
Q 036812          487 VLSPRLP  493 (499)
Q Consensus       487 ~~~~r~~  493 (499)
                      ++++|.+
T Consensus       459 ~~~~r~~  465 (466)
T PLN02655        459 HLKPRGS  465 (466)
T ss_pred             EEeecCC
Confidence            9998864


No 15 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.2e-75  Score=587.21  Aligned_cols=456  Identities=22%  Similarity=0.349  Sum_probs=356.0

Q ss_pred             cccCCCCCccccccccccccCCC----------------CCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHH
Q 036812            7 YQKAPEPAGAWPIIGHLHLLGGG----------------DQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECF   70 (499)
Q Consensus         7 ~~~~~PgP~~~p~lG~~~~l~~~----------------~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~   70 (499)
                      .++-||||+++|++||++.+...                .......+.+|+++||++|++++|+.+.|+++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            34568999999999999877410                01223357899999999999999999999999999999999


Q ss_pred             HhccccccCCCcchh---hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhh
Q 036812           71 TINDKALASRPKTAA---AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKN  147 (499)
Q Consensus        71 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  147 (499)
                      .++ ..+..++....   ....+   .+ ++..+|+.|+++||+++ +.|+.++++.+.+.+.++++.+++.|.+.  .+
T Consensus       120 ~~~-~~~~~r~~~~~~~~~~~~g---~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~--~~  191 (516)
T PLN02290        120 TKY-NTVTGKSWLQQQGTKHFIG---RG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKA--VE  191 (516)
T ss_pred             hcC-CCCCCCcchhhhHHHHHhc---CC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHH--Hh
Confidence            876 33444443211   11122   23 45667999999999998 89999999999999999999999999865  33


Q ss_pred             C-CCCceeehHHHHHHHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHH
Q 036812          148 N-SRPVLVELKKWLEDMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMA  226 (499)
Q Consensus       148 ~-g~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~  226 (499)
                      . ++  ++|+.+++..+++|+++.++||.++ +.    .++    +...+...............+|++.+++ ....+.
T Consensus       192 ~~~~--~vd~~~~~~~~~~~vi~~~~fG~~~-~~----~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~  259 (516)
T PLN02290        192 SGQT--EVEIGEYMTRLTADIISRTEFDSSY-EK----GKQ----IFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNRE  259 (516)
T ss_pred             cCCc--eEEhHHHHHHHHHHHHHHHHcCCcc-cc----chH----HHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHH
Confidence            3 34  7999999999999999999999988 43    121    2222222221111111112244443332 223455


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHH
Q 036812          227 MKKTAKELDAILEGWLEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLT  306 (499)
Q Consensus       227 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~  306 (499)
                      .....+.+.+++.+.|+++++....+...... .|+++.++++..+...++. .++++++.+++.++++||+|||+++++
T Consensus       260 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~l~~ll~~~~~~~~~~~-~l~~~~i~~~~~~~~~AG~dTta~tl~  337 (516)
T PLN02290        260 IKSLKGEVERLLMEIIQSRRDCVEIGRSSSYG-DDLLGMLLNEMEKKRSNGF-NLNLQLIMDECKTFFFAGHETTALLLT  337 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC-CCHHHHHHHhccccCCCCC-CCCHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            66677788999999999887654332111223 7999999986432211122 488999999999999999999999999


Q ss_pred             HHHHHHhcCchhHHHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEE
Q 036812          307 WAISLLLNNPNMLKKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRL  386 (499)
Q Consensus       307 ~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v  386 (499)
                      |++++|++||++|+|+++|++++++++ .++++++++||||+|||+||||++|+++.. +|.+.+|++++||.|||||.|
T Consensus       338 ~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IP~Gt~V  415 (516)
T PLN02290        338 WTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL-PRMAFEDIKLGDLHIPKGLSI  415 (516)
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc-ceeecCCeeECCEEECCCCEE
Confidence            999999999999999999999998864 789999999999999999999999999975 999999999999999999999


Q ss_pred             EEehhhhccCCCCC-CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCC
Q 036812          387 IVNVWKIQRDPRVW-KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSD  465 (499)
Q Consensus       387 ~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~  465 (499)
                      .++.|++||||++| +||++||||||++.+.     .....++|||.|+|.|+|++||++|++++++.||++|++++.++
T Consensus       416 ~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~  490 (516)
T PLN02290        416 WIPVLAIHHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDN  490 (516)
T ss_pred             EecHHHhcCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCC
Confidence            99999999999999 8999999999995421     13457899999999999999999999999999999999998765


Q ss_pred             CCCCCCCCCCcccccCCCceEEeecCCC
Q 036812          466 QPVDMTESPGLTIPKATPLEVVLSPRLP  493 (499)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~  493 (499)
                      ...  ....+++..|+.++++++++|+.
T Consensus       491 ~~~--~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        491 YRH--APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ccc--CccceeeecCCCCCeEEEEeCCC
Confidence            321  22235677888999999999863


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4e-74  Score=574.00  Aligned_cols=479  Identities=25%  Similarity=0.469  Sum_probs=358.1

Q ss_pred             ccCCCCCccccccccccccCCCCCchhHHHHHHHhhh-CCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhh
Q 036812            8 QKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKW-GPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAA   86 (499)
Q Consensus         8 ~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~y-G~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~   86 (499)
                      .++||||+++|++||++.+... ......++++.++| |+||++++|+.++|+|+||++++++++++...|++++.....
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~-~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMT-RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccC-CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3589999999999999987421 11123455556665 799999999999999999999999999887788888755444


Q ss_pred             hhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHH
Q 036812           87 KHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLN  166 (499)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d  166 (499)
                      ..++.++.++++..+|+.|+++|+++++.+++......+.+.+.++++.+++.+...  ...++  ++|+.+++..+++|
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~vd~~~~~~~~t~~  193 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSM--YQRSE--TVDVRELSRVYGYA  193 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--cccCC--ceeHHHHHHHHHHH
Confidence            444443335667777999999999998434555555556666667889999999864  33455  79999999999999


Q ss_pred             HHHHHhccccccCCCCCC--C-cHHHHHHHHHHHHHHhhhcc---hhhccccc-hhhhhchhhHHHHHHHHHHHHHHHHH
Q 036812          167 MVVRMVAGKRYFGASATC--D-DSEARQCQKAINQFFHLIGI---FTVSDALP-FFWWLDWQGHEMAMKKTAKELDAILE  239 (499)
Q Consensus       167 ~i~~~~fG~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~  239 (499)
                      +++.++||.++ +.....  + ......+...+.........   ....+.+| |+.++...+...+.......+.+++.
T Consensus       194 vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  272 (534)
T PLN03018        194 VTMRMLFGRRH-VTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNN  272 (534)
T ss_pred             HHHHHHhCCcc-ccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHH
Confidence            99999999997 543110  1 11111122222222221111   11122233 33322112223444455667888888


Q ss_pred             HHHHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhH
Q 036812          240 GWLEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNML  319 (499)
Q Consensus       240 ~~i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~  319 (499)
                      ++|+++++........... .|+++.|++..++.   +...++++++++++.++++||+|||+++++|++++|++||++|
T Consensus       273 ~~i~~~~~~~~~~~~~~~~-~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q  348 (534)
T PLN03018        273 PIIDERVELWREKGGKAAV-EDWLDTFITLKDQN---GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEIL  348 (534)
T ss_pred             HHHHHHHHHhhhccCCCCc-ccHHHHHHHhhccc---CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHH
Confidence            8898886543211000123 69999999865432   1103899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCC
Q 036812          320 KKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRV  399 (499)
Q Consensus       320 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~  399 (499)
                      +|+++||+++++.++.++.+++.+||||+|||+|+||++|++|...+|.+.+|++++||.|||||.|.++.+++||||++
T Consensus       349 ~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~  428 (534)
T PLN03018        349 RKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKI  428 (534)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCccc
Confidence            99999999998877788999999999999999999999999998878999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCC---ccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCC-CCCCCCCCC
Q 036812          400 WKNPSAFQPERFLTSHTDVD---FRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQ-PVDMTESPG  475 (499)
Q Consensus       400 ~~dp~~F~P~R~l~~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~  475 (499)
                      |+||++|+||||+++++...   ...++..++|||+|+|.|+|++||.+|++++++.||++|++++.++. +++.....+
T Consensus       429 ~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  508 (534)
T PLN03018        429 WKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDA  508 (534)
T ss_pred             CCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccc
Confidence            99999999999996542110   11245679999999999999999999999999999999999987653 333333335


Q ss_pred             cccccCCCceEEeecCCCCCCC
Q 036812          476 LTIPKATPLEVVLSPRLPPNPY  497 (499)
Q Consensus       476 ~~~~~~~~~~~~~~~r~~~~~~  497 (499)
                      ++.. +.+++|++++|...+.|
T Consensus       509 ~~~~-p~~~~v~~~~R~~~~~~  529 (534)
T PLN03018        509 SLLM-AKPLLLSVEPRLAPNLY  529 (534)
T ss_pred             ceec-CCCeEEEEEeccccccc
Confidence            4444 46999999999654543


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.9e-73  Score=569.11  Aligned_cols=442  Identities=18%  Similarity=0.246  Sum_probs=340.5

Q ss_pred             ccccCCCCCccccccccccccC-CC-CCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcc
Q 036812            6 QYQKAPEPAGAWPIIGHLHLLG-GG-DQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKT   83 (499)
Q Consensus         6 ~~~~~~PgP~~~p~lG~~~~l~-~~-~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~   83 (499)
                      ++.++||||+++|++||++.+. .. .+.++..+.+|+++||++|++++|+.++|+++||+++++++.++...|+.+...
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            4467899999999999987542 11 245678899999999999999999999999999999999999876666543222


Q ss_pred             hhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHH-hHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHH
Q 036812           84 AAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEA-LKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLED  162 (499)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~  162 (499)
                      .....++.  .+ ++..+|+.|+++|++++ ++|+..+++. +.+.+.+.+..+++.|..      ++  .+|+.+.+..
T Consensus       115 ~~~~~~g~--~~-~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~------~~--~vd~~~~~~~  182 (490)
T PLN02500        115 SIGGILGK--WS-MLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE------NS--TFSAQDEAKK  182 (490)
T ss_pred             HHHHHhCc--cc-ccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC------CC--CEEehHHHHH
Confidence            22222331  13 44557999999999998 8999998876 566777777777766532      34  6999999999


Q ss_pred             HHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 036812          163 MTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWL  242 (499)
Q Consensus       163 ~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  242 (499)
                      +++|++++++||.+. +.      .+...+...+.........  ....+|..       ..++..++.+.+.+++.++|
T Consensus       183 ~~~~vi~~~~fg~~~-~~------~~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i  246 (490)
T PLN02500        183 FTFNLMAKHIMSMDP-GE------EETEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKM  246 (490)
T ss_pred             HHHHHHHHHHhCCCC-Cc------hHHHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHH
Confidence            999999999999986 32      2223333333333221110  00112211       12344556778888899999


Q ss_pred             HHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHH
Q 036812          243 EEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKA  322 (499)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l  322 (499)
                      +++++....+...... .|+++.+++.   .      .++++++++++.++++||+|||+++++|++++|++||++|+|+
T Consensus       247 ~~~~~~~~~~~~~~~~-~d~l~~ll~~---~------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl  316 (490)
T PLN02500        247 EERIEKLKEEDESVEE-DDLLGWVLKH---S------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQEL  316 (490)
T ss_pred             HHHHHhhhcccCCCCc-chHHHHHHhc---c------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHH
Confidence            8877643322111123 7999999973   1      5889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhC-----CCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCC
Q 036812          323 QEELDQQIG-----MDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDP  397 (499)
Q Consensus       323 ~~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~  397 (499)
                      ++|++++++     ++..++++|+++|||++|||+|+||++|++|+. +|.+.+|++++||.|||||.|.++.|++||||
T Consensus       317 ~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp  395 (490)
T PLN02500        317 REEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDS  395 (490)
T ss_pred             HHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCc
Confidence            999998863     234689999999999999999999999999986 89999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCc----cCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 036812          398 RVWKNPSAFQPERFLTSHTDVDF----RGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTES  473 (499)
Q Consensus       398 ~~~~dp~~F~P~R~l~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~  473 (499)
                      ++|+||++|+||||++++.....    ..++..++|||+|+|.|+|++||++|++++++.||++|++++.++... .. .
T Consensus       396 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~  473 (490)
T PLN02500        396 SLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-F  473 (490)
T ss_pred             ccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-c
Confidence            99999999999999975421111    014567999999999999999999999999999999999998765432 11 1


Q ss_pred             CCcccccCCCceEEeec
Q 036812          474 PGLTIPKATPLEVVLSP  490 (499)
Q Consensus       474 ~~~~~~~~~~~~~~~~~  490 (499)
                       ..+. ++.++.|++++
T Consensus       474 -~~~~-~~~~l~~~~~~  488 (490)
T PLN02500        474 -PFVD-FPKGLPIRVRR  488 (490)
T ss_pred             -cccc-CCCCceEEEEe
Confidence             2223 34689998875


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-74  Score=578.34  Aligned_cols=456  Identities=29%  Similarity=0.512  Sum_probs=368.0

Q ss_pred             CCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhhhh--
Q 036812           11 PEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAAKH--   88 (499)
Q Consensus        11 ~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~--   88 (499)
                      ||||+++|++||++.+.. .+.+++.+.+|+++||+||++++++.+.++|+||+++++|+..+...++.++.......  
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            899999999999999874 25789999999999999999999999999999999999999988666665433222211  


Q ss_pred             ccCCCceeeecCCChhHHHHHHHHhhhcCCHH-HHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHH
Q 036812           89 MGYDYAVFGFAPYTPFWREMRKIATLELLSNR-RLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNM  167 (499)
Q Consensus        89 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~  167 (499)
                      ....+ ..++..+++.|+.+|+.++ +.|+.. .+ .+.+.+.++++.+++.|...  ...++  ++|+.++++.+++|+
T Consensus        80 ~~~~~-~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~--~~~~~--~vd~~~~~~~~~~d~  152 (463)
T PF00067_consen   80 GPFGG-KGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKK--AGSSG--PVDLFDWLRRFALDV  152 (463)
T ss_dssp             HHHTT-TSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHT--TTSES--EEEHHHHHHHHHHHH
T ss_pred             ccccc-ccccccccccccccccccc-ccccccccc-cccccccccccccccccccc--ccccc--eeeeecccccccccc
Confidence            01112 2355566899999999998 788877 66 89999999999999999987  44444  799999999999999


Q ss_pred             HHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcc--hhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          168 VVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGI--FTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEH  245 (499)
Q Consensus       168 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  245 (499)
                      ++.++||.++ ++.   ++.....+.+.+..+......  ..+...+|++.++ +....+....+.+.+.+++.++++++
T Consensus       153 i~~~~fG~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  227 (463)
T PF00067_consen  153 IGRVLFGKDF-GSL---DDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEER  227 (463)
T ss_dssp             HHHHHHSSHH-HGT---THHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccee-eec---cccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            9999999998 643   444444566666665543322  1234455655444 33456677778889999999999999


Q ss_pred             HHhhccCCCCCCchhhHHHHHHHHh-hcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHH
Q 036812          246 RQRRVSGGIESESEQDFIDVMLSLQ-EEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQE  324 (499)
Q Consensus       246 ~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~  324 (499)
                      .+....+  .... .|+++.+++.. +.+  ++. .+++++++++++.+++||+|||+.+++|++++|++||++|+++++
T Consensus       228 ~~~~~~~--~~~~-~d~l~~ll~~~~~~~--~~~-~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~  301 (463)
T PF00067_consen  228 REELDDG--DESR-RDLLDSLLQASSDSD--GPS-GLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLRE  301 (463)
T ss_dssp             HHSHHSS--SSSC-SSHHHHHHHHHHTTT--TTS-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ccccccc--cccc-ccccccccccccccc--ccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8876652  1133 89999999976 222  112 689999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCC
Q 036812          325 ELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPS  404 (499)
Q Consensus       325 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  404 (499)
                      ||+++.++++.++.+++++||||+|||+|+||++|++++.++|.+.+|++++||.|||||.|.++.+++|+||++|+||+
T Consensus       302 Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~  381 (463)
T PF00067_consen  302 EIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPD  381 (463)
T ss_dssp             HHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999977678899999999999999999999999999666999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCC-CcccccCCC
Q 036812          405 AFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESP-GLTIPKATP  483 (499)
Q Consensus       405 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~~  483 (499)
                      +|+||||++.+.  ....++..++|||.|+|.|||++||++|++++++.||++||++++++......... +++. |+.+
T Consensus       382 ~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~  458 (463)
T PF00067_consen  382 EFDPERFLDERG--ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPKP  458 (463)
T ss_dssp             S--TTGGBTTTS--TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE-EESS
T ss_pred             cccccccccccc--ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe-eCCC
Confidence            999999998753  12246788999999999999999999999999999999999999765443222222 4444 5567


Q ss_pred             ceEEe
Q 036812          484 LEVVL  488 (499)
Q Consensus       484 ~~~~~  488 (499)
                      ++|.+
T Consensus       459 ~~~~~  463 (463)
T PF00067_consen  459 LKVKF  463 (463)
T ss_dssp             SEEEE
T ss_pred             cEEeC
Confidence            87764


No 19 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.8e-73  Score=570.94  Aligned_cols=449  Identities=21%  Similarity=0.376  Sum_probs=340.3

Q ss_pred             ccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhhhhccCCCceeeecC
Q 036812           21 GHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAAKHMGYDYAVFGFAP  100 (499)
Q Consensus        21 G~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (499)
                      ||+..+.+  +.++..+.+||++||+||++++|+.++|+|+||+.+++||..+...|++++.........  +.+ ++..
T Consensus       143 G~l~~i~~--g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~-l~~~  217 (633)
T PLN02738        143 GSISAVRG--EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKG-LIPA  217 (633)
T ss_pred             CcHHHhcC--chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCc-eecC
Confidence            44444433  568899999999999999999998889999999999999987766666553322222221  123 4567


Q ss_pred             CChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHHHHHHhccccccCC
Q 036812          101 YTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNMVVRMVAGKRYFGA  180 (499)
Q Consensus       101 ~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~  180 (499)
                      +|+.|+.+|+.+. ++|+.++++.+++.+.++++.++++|...  ..+|+  ++|+.+.+..+++|+|+.++||.++ +.
T Consensus       218 dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~--~~~g~--~vdl~~~~~~lt~DVI~~~~FG~~~-~~  291 (633)
T PLN02738        218 DGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAA--ASDGE--DVEMESLFSRLTLDIIGKAVFNYDF-DS  291 (633)
T ss_pred             CcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCC--cEeHHHHHHHHHHHHHHHHHhCCCc-cc
Confidence            7999999999998 89999999999999999999999999875  45566  8999999999999999999999998 65


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------CC
Q 036812          181 SATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEHRQRRVSG------GI  254 (499)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~------~~  254 (499)
                      +.. ++.....+...+...............+|.+..+  ....++..+..+.+.++..++++..++..+..      ..
T Consensus       292 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~  368 (633)
T PLN02738        292 LSN-DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEY  368 (633)
T ss_pred             ccc-chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcc
Confidence            311 1111122222222211100000000111222112  11123444455556666666665543321110      00


Q ss_pred             CCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHHHHhhCCCC
Q 036812          255 ESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEELDQQIGMDR  334 (499)
Q Consensus       255 ~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  334 (499)
                      ....+.|+++.|++..  .      .++++++.++++.+++||+|||+++|+|++++|++||++|+|||+|+++++++ +
T Consensus       369 ~~~~~~dil~~Ll~~~--~------~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~  439 (633)
T PLN02738        369 MNERDPSILHFLLASG--D------DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-R  439 (633)
T ss_pred             cccccchHHHHHHHcC--C------CCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-C
Confidence            0112268999998742  1      58899999999999999999999999999999999999999999999999874 6


Q ss_pred             CCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCC
Q 036812          335 QVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPSAFQPERFLTS  414 (499)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  414 (499)
                      .++++++++||||+|||+|+|||+|+++.+ .|.+.+|++++||.|||||.|.++.|.+||||++|+||++|+||||+..
T Consensus       440 ~~t~edL~kLPYL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~  518 (633)
T PLN02738        440 FPTIEDMKKLKYTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLD  518 (633)
T ss_pred             CCCHHHHccCHHHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCC
Confidence            789999999999999999999999999996 7889999999999999999999999999999999999999999999853


Q ss_pred             CCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCceEEeecCCCC
Q 036812          415 HTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPLEVVLSPRLPP  494 (499)
Q Consensus       415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  494 (499)
                      +...........++|||.|+|.|+|++||++|++++|+.|+++|++++.++.+ +.....+.++.++.++++++++|..+
T Consensus       519 ~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~~  597 (633)
T PLN02738        519 GPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTKP  597 (633)
T ss_pred             CCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCCC
Confidence            21111122456899999999999999999999999999999999999876542 22223355666788999999999865


No 20 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.2e-73  Score=564.97  Aligned_cols=456  Identities=29%  Similarity=0.496  Sum_probs=362.4

Q ss_pred             ccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch-h-
Q 036812            8 QKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA-A-   85 (499)
Q Consensus         8 ~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~-~-   85 (499)
                      .+.||||.++|++|++..+.........++.++..+||++|+.|+|+.+.|+++||+.+++|+..+.......+.+. . 
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~  113 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL  113 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence            47799999999999999886421356778899999999999999999999999999999999975544444443333 2 


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ...+|.   ++++.. |+.|+.+||+++ ++|+...++.+...+.++...++..+...   ..++  .+|+.+.++++|+
T Consensus       114 ~~~lG~---gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~--~vd~~~~~~~~tl  183 (497)
T KOG0157|consen  114 KPWLGD---GLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELA---ASGE--EVDLQDLLKRLTL  183 (497)
T ss_pred             HHHhcC---ccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHh---hcCC--eEcHHHHHHHHHH
Confidence            244443   445555 999999999998 89999999999999999999988888764   3354  4999999999999


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccc-hhhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALP-FFWWLDWQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      |+|+.++||....+.    ..+....+.+++........   .....| +..++..-+..++..++.+.+.++++++|++
T Consensus       184 d~i~~~~~G~~~~~~----~~~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~  256 (497)
T KOG0157|consen  184 DIICKTAMGPESLDA----EGPELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRE  256 (497)
T ss_pred             HHHHHHhcCCccccc----cCCcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999222011    11222345555554433322   222344 3333322236788889999999999999999


Q ss_pred             HHHhhccCCCC-CCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHH
Q 036812          245 HRQRRVSGGIE-SESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQ  323 (499)
Q Consensus       245 ~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~  323 (499)
                      +++....+... .....|+++.+..... .      .+++++|++++.++++||+||||++++|++++|+.||++|+|++
T Consensus       257 rr~~~~~~~~~~~~~~~d~L~~~~~~~~-~------~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~  329 (497)
T KOG0157|consen  257 RREELEKEGSGEEKKRLDFLDTLLLEED-K------PLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLR  329 (497)
T ss_pred             HHHHHHhcCCcccchhhhHHHHHHHhcc-C------CCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHH
Confidence            99765432111 1223788886333222 2      79999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCC-CCCChhhccCChhHHHHHHHHhccCCCCCCCCccccccccccc-ceeeCCCCEEEEehhhhccCCCCCC
Q 036812          324 EELDQQIGMD-RQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVA-GYHIPAGTRLIVNVWKIQRDPRVWK  401 (499)
Q Consensus       324 ~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~  401 (499)
                      +|+++++++. ..++....++|+||++||+||||||||+|+. .|.+.+|++++ ||.||||+.|.++.+++||||++|+
T Consensus       330 eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~  408 (497)
T KOG0157|consen  330 EEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWG  408 (497)
T ss_pred             HHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccC
Confidence            9999999753 3234444447999999999999999999998 99999999995 8999999999999999999999995


Q ss_pred             -CCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCccccc
Q 036812          402 -NPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPK  480 (499)
Q Consensus       402 -dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  480 (499)
                       ||++||||||++.+..  ...++.+|+|||+|+|.|+|++||++|++++++.||++|++++..+..  ......++..+
T Consensus       409 ~dp~~F~PeRf~~~~~~--~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~  484 (497)
T KOG0157|consen  409 EDPEEFDPERFLDGEEK--AKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRP  484 (497)
T ss_pred             CChhhcCccccCCCCCc--CCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEe
Confidence             9999999999975421  134678999999999999999999999999999999999999887643  34456788889


Q ss_pred             CCCceEEeecCC
Q 036812          481 ATPLEVVLSPRL  492 (499)
Q Consensus       481 ~~~~~~~~~~r~  492 (499)
                      +.+++|++++|.
T Consensus       485 ~~gl~v~~~~r~  496 (497)
T KOG0157|consen  485 KNGLKVKLRPRG  496 (497)
T ss_pred             cCCeEEEEEeCC
Confidence            999999999986


No 21 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1e-72  Score=561.88  Aligned_cols=455  Identities=18%  Similarity=0.316  Sum_probs=342.1

Q ss_pred             CCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceE---EecCCccEEEecCHHHHHHHHHhccccccCCCcchh-
Q 036812           10 APEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFN---IRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA-   85 (499)
Q Consensus        10 ~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~---i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~-   85 (499)
                      -.|||+++|++||+..+.......++.+.+...+||..++   +++|+.++|+|+||+++++|+.++...|++++.... 
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            3578999999999977653222345556665566887665   577899999999999999999987666766543221 


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHh--HHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEAL--KHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDM  163 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~--~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~  163 (499)
                      ...++   .+ ++..+|+.|+++||+++ ++|+.+++..+  .+.+.++++.+++.+.+.  ..+|+  ++|+.+.+.++
T Consensus       112 ~~~~g---~g-l~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~vd~~~~~~~~  182 (500)
T PLN02169        112 FDVLG---EG-ILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNA--AHENI--IIDLQDVFMRF  182 (500)
T ss_pred             HHhhc---Cc-ccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCC--eEeHHHHHHHH
Confidence            12222   23 55667999999999998 99999887643  466778888888888765  44566  89999999999


Q ss_pred             HHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhh----hchhhHHHHHHHHHHHHHHHHH
Q 036812          164 TLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWW----LDWQGHEMAMKKTAKELDAILE  239 (499)
Q Consensus       164 ~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~l~~~~~  239 (499)
                      ++|+|+.++||.+. +..... + ....+...+........   ...+.|++.+    +...+..++..++.+.+.+++.
T Consensus       183 t~dvi~~~~fG~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (500)
T PLN02169        183 MFDTSSILMTGYDP-MSLSIE-M-LEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFA  256 (500)
T ss_pred             HHHHHHhheeCCCc-cccCCC-C-CCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence            99999999999987 543111 1 01133333333222111   1122343211    1112345667788899999999


Q ss_pred             HHHHHHHHhhccCC-CCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchh
Q 036812          240 GWLEEHRQRRVSGG-IESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNM  318 (499)
Q Consensus       240 ~~i~~~~~~~~~~~-~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~  318 (499)
                      ++|+++++...... .++.. +|+++.+++...++...+. .++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       257 ~~I~~r~~~~~~~~~~~~~~-~d~l~~ll~~~~~~~~~~~-~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pev  334 (500)
T PLN02169        257 KIISSRRKEEISRAETEPYS-KDALTYYMNVDTSKYKLLK-PKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQV  334 (500)
T ss_pred             HHHHHHHHHhhccccccCCC-cCHHHHHHhcccccccccc-CCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHH
Confidence            99998876422110 00123 6899999976422100011 478899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCccccccc-ccccceeeCCCCEEEEehhhhccCC
Q 036812          319 LKKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMED-CTVAGYHIPAGTRLIVNVWKIQRDP  397 (499)
Q Consensus       319 ~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~-~~i~g~~ip~G~~v~~~~~~~~~d~  397 (499)
                      |+|+++||+++      ++++++.+||||+|||+||||++|++|+. .|.+.+| +.++||.|||||.|.++.|++||||
T Consensus       335 q~kl~~Ei~~v------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~  407 (500)
T PLN02169        335 MAKIRHEINTK------FDNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMR  407 (500)
T ss_pred             HHHHHHHHHhh------CCHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCc
Confidence            99999999875      36899999999999999999999999998 6666655 4459999999999999999999999


Q ss_pred             CCC-CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCc
Q 036812          398 RVW-KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGL  476 (499)
Q Consensus       398 ~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  476 (499)
                      ++| +||++||||||+++++... ..++..|+|||+|+|.|+|++||++|++++++.||++|++++.++.++  ....++
T Consensus       408 ~~w~~dP~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~  484 (500)
T PLN02169        408 SVWGEDALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSI  484 (500)
T ss_pred             cccCCChhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccce
Confidence            999 8999999999996542111 113678999999999999999999999999999999999998754433  334466


Q ss_pred             ccccCCCceEEeecC
Q 036812          477 TIPKATPLEVVLSPR  491 (499)
Q Consensus       477 ~~~~~~~~~~~~~~r  491 (499)
                      ++.|++++++++++|
T Consensus       485 ~l~~~~gl~l~l~~~  499 (500)
T PLN02169        485 LLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEecCCCEEEEEEeC
Confidence            777889999999987


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.5e-72  Score=562.16  Aligned_cols=464  Identities=20%  Similarity=0.267  Sum_probs=345.4

Q ss_pred             ccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhh---CCceEEecCCccEEEecCHHHHHHHHHhccccccCC
Q 036812            4 MIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKW---GPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASR   80 (499)
Q Consensus         4 ~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~y---G~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~   80 (499)
                      +.++++-+|||+++|++||++.+..   . +..+.+|.++|   |++|++++|+.+.|+++||+++++|+.++...|...
T Consensus        25 ~~~~~~~~pgp~~~p~~G~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~  100 (516)
T PLN03195         25 HRWSQRNRKGPKSWPIIGAALEQLK---N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKG  100 (516)
T ss_pred             HHhhccccCCCCCCCeecchHHHHh---c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCc
Confidence            3344556799999999999876542   2 33456777777   899999999999999999999999998764556544


Q ss_pred             Ccch-hhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHH-HHHHHHHHHHHHHHHhhhCCCCceeehHH
Q 036812           81 PKTA-AAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVR-ISEVDMGLRDLHGLWAKNNSRPVLVELKK  158 (499)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~g~~~~vdl~~  158 (499)
                      +... ....+.  +.+ +++.+|+.|+++||+++ +.|+.++++.+.+.+ .+.++.+++.+...  ...|+  ++|+.+
T Consensus       101 ~~~~~~~~~~~--g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~vd~~~  172 (516)
T PLN03195        101 EVYHSYMEVLL--GDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQA--SFANQ--VVDMQD  172 (516)
T ss_pred             HhHHHHHHHHh--cCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCC--eEcHHH
Confidence            3221 111111  123 55678999999999998 899999999999876 66677788777654  33455  899999


Q ss_pred             HHHHHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHH
Q 036812          159 WLEDMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAIL  238 (499)
Q Consensus       159 ~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~  238 (499)
                      ++..+++|+|+.++||.++ +......+.  ..+.+.++........ .....++.+.++......+.+.+....+.+++
T Consensus       173 ~~~~~~~dvi~~~~fG~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (516)
T PLN03195        173 LFMRMTLDSICKVGFGVEI-GTLSPSLPE--NPFAQAFDTANIIVTL-RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFT  248 (516)
T ss_pred             HHHHHHHHHHHHHHhCCCc-cccccCCCc--cHHHHHHHHHHHHHHH-HHhcchhhHHHhcccchHHHHHHHHHHHHHHH
Confidence            9999999999999999998 654211111  1233333332211100 01111111111111122344456777888888


Q ss_pred             HHHHHHHHHhhccCCC-CCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCch
Q 036812          239 EGWLEEHRQRRVSGGI-ESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPN  317 (499)
Q Consensus       239 ~~~i~~~~~~~~~~~~-~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~  317 (499)
                      .+.++++.++...... .+....|+++.|+++.+++   +. .+++++++++++++++||+|||+++++|++++|++||+
T Consensus       249 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~-~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~  324 (516)
T PLN03195        249 YSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP---DS-NFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPH  324 (516)
T ss_pred             HHHHHHHHHHHhccccccccccccHHHHHHhccCCC---CC-CCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHH
Confidence            8899888754322100 0112269999999754322   12 68999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhhCC--------------------CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccc-c
Q 036812          318 MLKKAQEELDQQIGM--------------------DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTV-A  376 (499)
Q Consensus       318 ~~~~l~~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~  376 (499)
                      +|+|+++|+++++++                    ++.++++++++||||+|||+|+||++|++|.. +|.+.+|..+ +
T Consensus       325 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~  403 (516)
T PLN03195        325 VAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPD  403 (516)
T ss_pred             HHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCC
Confidence            999999999987642                    24578999999999999999999999999998 6666666554 9


Q ss_pred             ceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Q 036812          377 GYHIPAGTRLIVNVWKIQRDPRVW-KNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLL  455 (499)
Q Consensus       377 g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll  455 (499)
                      |+.|||||.|.++.|++||||++| +||++|+||||++++.  .....+..++|||+|+|.|+|++||++|++++++.|+
T Consensus       404 G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~--~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll  481 (516)
T PLN03195        404 GTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGV--FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLC  481 (516)
T ss_pred             CcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCC--cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 9999999999996431  0112446799999999999999999999999999999


Q ss_pred             HhccccCCCCCCCCCCCCCCcccccCCCceEEeecCC
Q 036812          456 HAFELATPSDQPVDMTESPGLTIPKATPLEVVLSPRL  492 (499)
Q Consensus       456 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  492 (499)
                      ++|++++.++.+..  .....+..|..+++|++++|+
T Consensus       482 ~~f~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        482 RFFKFQLVPGHPVK--YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HhceeEecCCCcce--eeeeeEEecCCCEEEEEEeCC
Confidence            99999987554332  223445567889999999885


No 23 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=9.2e-72  Score=552.47  Aligned_cols=434  Identities=19%  Similarity=0.263  Sum_probs=342.9

Q ss_pred             cccccccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCc
Q 036812            3 VMIQYQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPK   82 (499)
Q Consensus         3 ~~~~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~   82 (499)
                      .+++++++||||+++|++||++.+.   +++..++.+++++||++|++++|+.++++|+||+++++++.++...+..+..
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~  101 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEFL---KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP  101 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHHH---HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC
Confidence            4567789999999999999998875   4567789999999999999999999999999999999999877665533322


Q ss_pred             chhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHH-hHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHH
Q 036812           83 TAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEA-LKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLE  161 (499)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~  161 (499)
                      ......++.   +.+++.+|+.|+.+|+.++ ++|+...++. +.+.+.+.+++++++|..      ++  ++|+.+.+.
T Consensus       102 ~~~~~~lg~---~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~v~~~~~~~  169 (463)
T PLN02774        102 QSMLDILGT---CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG------LK--TIDIQEKTK  169 (463)
T ss_pred             HHHHHHhCc---cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC------CC--CEEeeHHHH
Confidence            222233332   2345568999999999997 7999998876 688888888888776642      34  699999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHH
Q 036812          162 DMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGW  241 (499)
Q Consensus       162 ~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  241 (499)
                      .+++++++.++||... +.       ...++...+......  ..    .+|.  +++ ....++..++.+.+.+++.+.
T Consensus       170 ~~~~~~~~~~~~g~~~-~~-------~~~~~~~~~~~~~~~--~~----~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~  232 (463)
T PLN02774        170 EMALLSALKQIAGTLS-KP-------ISEEFKTEFFKLVLG--TL----SLPI--DLP-GTNYRSGVQARKNIVRMLRQL  232 (463)
T ss_pred             HHHHHHHHHHHcCCCC-hH-------HHHHHHHHHHHHhcc--cc----cCCc--CCC-ChhhhHHHHHHHHHHHHHHHH
Confidence            9999999999999775 21       112233222222111  10    1121  111 112345556778888899988


Q ss_pred             HHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHH
Q 036812          242 LEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKK  321 (499)
Q Consensus       242 i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~  321 (499)
                      |+++++..      ... +|+++.|++...++    . .++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       233 i~~r~~~~------~~~-~d~l~~ll~~~~~~----~-~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~k  300 (463)
T PLN02774        233 IQERRASG------ETH-TDMLGYLMRKEGNR----Y-KLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQE  300 (463)
T ss_pred             HHHHHhcC------CCc-ccHHHHHHhCccCC----C-CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHH
Confidence            88876431      123 79999999743221    1 589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCC---CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCC
Q 036812          322 AQEELDQQIGM---DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPR  398 (499)
Q Consensus       322 l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~  398 (499)
                      +++|++++++.   ...++++++++||||+|||+|+||++|+++.. .|.+.+|++++||.||||+.|+++.+.+||||+
T Consensus       301 l~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~  379 (463)
T PLN02774        301 LRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPF  379 (463)
T ss_pred             HHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcc
Confidence            99999998763   35689999999999999999999999999976 799999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCccc
Q 036812          399 VWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTI  478 (499)
Q Consensus       399 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  478 (499)
                      +|+||++|+||||++++.    + ....++|||+|+|.|||++||++|++++++.||++|++++.++.+.  ....  +.
T Consensus       380 ~~~dP~~F~PeRfl~~~~----~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~~~--~~  450 (463)
T PLN02774        380 LYPDPMTFNPWRWLDKSL----E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MKFP--RV  450 (463)
T ss_pred             cCCChhccCchhcCCCCc----C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--ccCC--CC
Confidence            999999999999996531    1 1236899999999999999999999999999999999998765432  1122  22


Q ss_pred             ccCCCceEEeec
Q 036812          479 PKATPLEVVLSP  490 (499)
Q Consensus       479 ~~~~~~~~~~~~  490 (499)
                      .|++++.+++++
T Consensus       451 ~p~~g~~~~~~~  462 (463)
T PLN02774        451 EAPNGLHIRVSP  462 (463)
T ss_pred             CCCCCceEEeee
Confidence            367899999883


No 24 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=3.8e-71  Score=550.87  Aligned_cols=462  Identities=25%  Similarity=0.394  Sum_probs=359.0

Q ss_pred             ccCCCCCccccccccccccCCC--CCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchh
Q 036812            8 QKAPEPAGAWPIIGHLHLLGGG--DQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAA   85 (499)
Q Consensus         8 ~~~~PgP~~~p~lG~~~~l~~~--~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~   85 (499)
                      .++..|..|||++|+.+....+  ...++..+.+|+++||++|++++|+.+.|+++||+++++|+.+....|.+++....
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~   90 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV   90 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh
Confidence            3567899999999998877433  35689999999999999999999999999999999999999876667766543222


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHH-HHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKH-VRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMT  164 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~  164 (499)
                      ...+.  +.+ ++..+|+.|+++||+++ +.|+.++++.+.+ .+.++++.+++.+.+.  ..+|+  ++|+.++++.++
T Consensus        91 ~~~~~--~~~-i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~--~~~g~--~vd~~~~~~~~~  162 (489)
T PLN02936         91 SEFLF--GSG-FAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPV--ALSGE--AVNMEAKFSQLT  162 (489)
T ss_pred             hHHHh--cCc-cccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCC--ceeHHHHHHHHH
Confidence            11111  123 45577999999999998 8999988888755 7788999999999876  44566  899999999999


Q ss_pred             HHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhh--h-chhhHHHHHHHHHHHHHHHHHHH
Q 036812          165 LNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWW--L-DWQGHEMAMKKTAKELDAILEGW  241 (499)
Q Consensus       165 ~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~-~~~~~~~~~~~~~~~l~~~~~~~  241 (499)
                      +|+|+.++||.++ +.... ++    ++...+...+..... .....+|++..  + ...+..++..++.+.+.+++.+.
T Consensus       163 ~dvi~~~~fG~~~-~~~~~-~~----~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~  235 (489)
T PLN02936        163 LDVIGLSVFNYNF-DSLTT-DS----PVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDL  235 (489)
T ss_pred             HHHHHHHHcCCCc-ccccc-Cc----HHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHH
Confidence            9999999999998 65411 11    222222222221111 11223343211  1 00122445667778888888888


Q ss_pred             HHHHHHhhccCCC----C---CCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhc
Q 036812          242 LEEHRQRRVSGGI----E---SESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLN  314 (499)
Q Consensus       242 i~~~~~~~~~~~~----~---~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~  314 (499)
                      |+++++..+....    .   .+...|+++.|++..+        .++++++.++++++++||+|||+++++|++++|++
T Consensus       236 i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~  307 (489)
T PLN02936        236 VDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSK  307 (489)
T ss_pred             HHHHHHHHhhcccccccccccccCchHHHHHHHhccc--------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            8877653221100    0   1122689999986431        57899999999999999999999999999999999


Q ss_pred             CchhHHHHHHHHHHhhCCCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhc
Q 036812          315 NPNMLKKAQEELDQQIGMDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQ  394 (499)
Q Consensus       315 ~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~  394 (499)
                      ||++|+++++|++++++. ..++++++++||||+|||+||||++|+++...+|.+..|+.++||.||||+.|+++.+++|
T Consensus       308 ~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~  386 (489)
T PLN02936        308 NPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIH  386 (489)
T ss_pred             CHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhcc
Confidence            999999999999999875 4578999999999999999999999999998777777888889999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 036812          395 RDPRVWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESP  474 (499)
Q Consensus       395 ~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~  474 (499)
                      |||++|+||++|+||||+..+........+..++|||.|+|.|||++||++|++++++.|+++|++++++++++..  ..
T Consensus       387 rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~  464 (489)
T PLN02936        387 RSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TT  464 (489)
T ss_pred             CChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ec
Confidence            9999999999999999996432111122345899999999999999999999999999999999999887554322  23


Q ss_pred             CcccccCCCceEEeecCCCCC
Q 036812          475 GLTIPKATPLEVVLSPRLPPN  495 (499)
Q Consensus       475 ~~~~~~~~~~~~~~~~r~~~~  495 (499)
                      +++..|+.++.|++++|..|.
T Consensus       465 ~~~~~~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        465 GATIHTTNGLYMTVSRRRVPD  485 (489)
T ss_pred             ceEEeeCCCeEEEEEeeeCCC
Confidence            455567789999999998874


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.8e-71  Score=546.89  Aligned_cols=440  Identities=20%  Similarity=0.262  Sum_probs=343.1

Q ss_pred             cccccCCCCCccccccccccccCC--CCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCc
Q 036812            5 IQYQKAPEPAGAWPIIGHLHLLGG--GDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPK   82 (499)
Q Consensus         5 ~~~~~~~PgP~~~p~lG~~~~l~~--~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~   82 (499)
                      .+++++||||.++|++||++.+..  +..+++.++.+|+++||+||++++|+.+.|+++||++++++|.++...|+.+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            466789999999999999988742  114578899999999999999999999999999999999999988777765432


Q ss_pred             chhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHH-hHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHH
Q 036812           83 TAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEA-LKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLE  161 (499)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~  161 (499)
                      ......++.   +.++..+|+.|+++|+++. +.|+..++.. +.+.+.+.++.+++.|.      .++  ++|+.+.+.
T Consensus        83 ~~~~~l~g~---~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~  150 (452)
T PLN03141         83 KSLTELMGK---SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR------DDP--PVLVQDETK  150 (452)
T ss_pred             hhHHHHhCc---ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc------CCC--CEEhHHHHH
Confidence            222223332   2355667999999999997 7888777655 34555555555554432      244  799999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHH
Q 036812          162 DMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGW  241 (499)
Q Consensus       162 ~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  241 (499)
                      .++++++++++||.+. +      + +...+...+..+.....      .+|.  +++.+ ...+..++.+.+.+++.++
T Consensus       151 ~~~~~vi~~~~~G~~~-~------~-~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~  213 (452)
T PLN03141        151 KIAFEVLVKALISLEP-G------E-EMEFLKKEFQEFIKGLM------SLPI--KLPGT-RLYRSLQAKKRMVKLVKKI  213 (452)
T ss_pred             HHHHHHHHHHHcCCCc-h------H-HHHHHHHHHHHHhhhHH------hCcc--CCCch-HhHHHHHHHHHHHHHHHHH
Confidence            9999999999999876 2      1 22233333333322111      1121  11111 1233446788899999999


Q ss_pred             HHHHHHhhccCCC-CCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHH
Q 036812          242 LEEHRQRRVSGGI-ESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLK  320 (499)
Q Consensus       242 i~~~~~~~~~~~~-~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~  320 (499)
                      |++++.....+.. ......|+++.++++.. .      .+++++++.+++++++||+|||+++++|++++|++||++|+
T Consensus       214 i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-~------~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~  286 (452)
T PLN03141        214 IEEKRRAMKNKEEDETGIPKDVVDVLLRDGS-D------ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQ  286 (452)
T ss_pred             HHHHHHHHhccCccccCChhhHHHHHHhcCC-C------CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHH
Confidence            9888765432100 00112699999997531 1      68999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhC----CCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccC
Q 036812          321 KAQEELDQQIG----MDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRD  396 (499)
Q Consensus       321 ~l~~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d  396 (499)
                      ++++|++++.+    .+..++++++.+||||+|||+|++|++|+++.. +|.+.+|++++||.||||+.|+++.+++|||
T Consensus       287 kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d  365 (452)
T PLN03141        287 QLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLD  365 (452)
T ss_pred             HHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCC
Confidence            99999988753    245689999999999999999999999999865 8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCc
Q 036812          397 PRVWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGL  476 (499)
Q Consensus       397 ~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  476 (499)
                      |++|+||++|+||||++.+      ..+..|+|||+|+|.|+|++||.+|++++++.|+++|++++.++...   .  ..
T Consensus       366 ~~~~~dP~~F~PeRfl~~~------~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~--~~  434 (452)
T PLN03141        366 EENYDNPYQFNPWRWQEKD------MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---N--FP  434 (452)
T ss_pred             chhcCCccccCcccccCCC------CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---e--cc
Confidence            9999999999999999753      23567999999999999999999999999999999999997664321   1  23


Q ss_pred             ccccCCCceEEeecCC
Q 036812          477 TIPKATPLEVVLSPRL  492 (499)
Q Consensus       477 ~~~~~~~~~~~~~~r~  492 (499)
                      ++.|..++.|.+++|.
T Consensus       435 ~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        435 TVRMKRKLPIWVTRID  450 (452)
T ss_pred             cccCCCCceEEEEeCC
Confidence            5677889999999985


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.9e-70  Score=541.23  Aligned_cols=427  Identities=20%  Similarity=0.285  Sum_probs=340.2

Q ss_pred             cccCCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcchhh
Q 036812            7 YQKAPEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTAAA   86 (499)
Q Consensus         7 ~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~   86 (499)
                      ..+.||||+++|++||+..+..  ++++..+.+++++||++|++++|+.+.|+++||+++++++.++.+.|.........
T Consensus        33 ~~~~Ppgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~  110 (463)
T PLN02196         33 KLPLPPGTMGWPYVGETFQLYS--QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKE  110 (463)
T ss_pred             CCCCCCCCCCCCccchHHHHHh--cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHH
Confidence            3457899999999999987643  57889999999999999999999999999999999999998876655321111111


Q ss_pred             hhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHH
Q 036812           87 KHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLN  166 (499)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d  166 (499)
                      ..++  . ..++..+|+.|+++||+++ +.|+.++++.+.+.+.++++++++.|.       ++  ++|+.++++.++++
T Consensus       111 ~~~g--~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~~--~v~~~~~~~~~~~~  177 (463)
T PLN02196        111 RMLG--K-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-------GT--QINTYQEMKTYTFN  177 (463)
T ss_pred             HHcC--c-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-------CC--eEEeHHHHHHHHHH
Confidence            1222  1 2355677999999999998 899999999999999999999887663       34  79999999999999


Q ss_pred             HHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          167 MVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEHR  246 (499)
Q Consensus       167 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~  246 (499)
                      +++.++||.+. ..    ..+   .+.+.+......      ...+|+.  + +....++..++.+.+.+++.+.|+++.
T Consensus       178 v~~~~~fG~~~-~~----~~~---~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~  240 (463)
T PLN02196        178 VALLSIFGKDE-VL----YRE---DLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRR  240 (463)
T ss_pred             HHHHHHcCCCC-ch----HHH---HHHHHHHHHhcc------hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999986 21    111   222221111111      1112221  1 111124555677888888888888776


Q ss_pred             HhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHH
Q 036812          247 QRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEEL  326 (499)
Q Consensus       247 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei  326 (499)
                      +..      .+. .|+++.+++.  ..      .++++++.++++++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       241 ~~~------~~~-~d~l~~ll~~--~~------~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei  305 (463)
T PLN02196        241 QNG------SSH-NDLLGSFMGD--KE------GLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQ  305 (463)
T ss_pred             hcC------CCc-ccHHHHHHhc--CC------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            532      123 7899998852  11      68999999999999999999999999999999999999999999999


Q ss_pred             HHhhCC---CCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCC
Q 036812          327 DQQIGM---DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNP  403 (499)
Q Consensus       327 ~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp  403 (499)
                      +++.+.   +..++++++.+||||+|||+|+||++|++++. .|.+.+|+.++||.|||||.|+++.+++||||++|+||
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP  384 (463)
T PLN02196        306 MAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDP  384 (463)
T ss_pred             HHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCc
Confidence            988763   35689999999999999999999999999998 69999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCC
Q 036812          404 SAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATP  483 (499)
Q Consensus       404 ~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  483 (499)
                      ++|+||||++..       .+..++|||.|+|.|+|++||++|++++++.|+++|++++.+++ ..+.  ...+..|+.+
T Consensus       385 ~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~  454 (463)
T PLN02196        385 GKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNG  454 (463)
T ss_pred             CccChhhhcCCC-------CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceE--EcccccCCCC
Confidence            999999999642       34679999999999999999999999999999999999987543 2232  2333457889


Q ss_pred             ceEEeecC
Q 036812          484 LEVVLSPR  491 (499)
Q Consensus       484 ~~~~~~~r  491 (499)
                      +.|+++..
T Consensus       455 ~~~~~~~~  462 (463)
T PLN02196        455 LPIALSRK  462 (463)
T ss_pred             ceEEEecC
Confidence            99988763


No 27 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.9e-68  Score=535.44  Aligned_cols=441  Identities=19%  Similarity=0.287  Sum_probs=344.6

Q ss_pred             cccCCCCCccccccccccccCCC--CCchhHHHHHHHhhhCC--ceEEecCCccEEEecCHHHHHHHHHhccccccCCCc
Q 036812            7 YQKAPEPAGAWPIIGHLHLLGGG--DQLLYRTLGAMADKWGP--AFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPK   82 (499)
Q Consensus         7 ~~~~~PgP~~~p~lG~~~~l~~~--~~~~~~~~~~~~~~yG~--v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~   82 (499)
                      ..++||||+++|++||++.+...  ..+++.++.+++++||+  +|++++++.+.|+++||+++++|+.++ +.|..+..
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            34789999999999999876421  24678899999999997  789999999999999999999999876 44544322


Q ss_pred             chhhhhccCCCceeeecCCChhHHHHHHHHhhhcC-CHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHH
Q 036812           83 TAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELL-SNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLE  161 (499)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-s~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~  161 (499)
                      ......++.   ..++..+|+.|+++|+.+. +.| +.++++.+.+.+.++++.+++.+..     .+   .+|+.+++.
T Consensus       119 ~~~~~~~g~---~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-----~~---~v~~~~~~~  186 (490)
T PLN02302        119 ESTVELIGR---KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK-----MG---EIEFLTELR  186 (490)
T ss_pred             hhHHHHhcc---ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC-----CC---CEehHHHHH
Confidence            222222221   2345567999999999998 677 5788999999999999999987743     23   599999999


Q ss_pred             HHHHHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHH
Q 036812          162 DMTLNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGW  241 (499)
Q Consensus       162 ~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  241 (499)
                      .++++++++++||.+. +.       ....+...+.........  ....+|..       ...+..++.+.+.+++.+.
T Consensus       187 ~~~~~vi~~~~~G~~~-~~-------~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~  249 (490)
T PLN02302        187 KLTFKIIMYIFLSSES-EL-------VMEALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSI  249 (490)
T ss_pred             HHHHHHHHHHHcCCCC-hH-------HHHHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHH
Confidence            9999999999999887 32       112222222211111100  00012211       1233345667788888888


Q ss_pred             HHHHHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHH
Q 036812          242 LEEHRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKK  321 (499)
Q Consensus       242 i~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~  321 (499)
                      |+++++....+. .... .|+++.|+++.+++   +. .+++++++++++.+++||+|||+++++|++++|++||++|+|
T Consensus       250 i~~~~~~~~~~~-~~~~-~d~l~~ll~~~~~~---~~-~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~k  323 (490)
T PLN02302        250 VDERRNSRKQNI-SPRK-KDMLDLLLDAEDEN---GR-KLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQK  323 (490)
T ss_pred             HHHHHHhhhccC-CCCc-CCHHHHHHhhhccC---CC-CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            888875433210 1123 79999999865432   22 589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCC----CCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCC
Q 036812          322 AQEELDQQIGMD----RQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDP  397 (499)
Q Consensus       322 l~~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~  397 (499)
                      +++|++++.++.    ..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||
T Consensus       324 l~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~  402 (490)
T PLN02302        324 AKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDP  402 (490)
T ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCc
Confidence            999999987642    2378999999999999999999999999987 89999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcc
Q 036812          398 RVWKNPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLT  477 (499)
Q Consensus       398 ~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  477 (499)
                      ++|+||++|+||||++..      ..+..++|||.|+|.|+|++||.+|++++++.|+++|++++.++. .+...  ...
T Consensus       403 ~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~~--~~~  473 (490)
T PLN02302        403 EVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVMY--LPH  473 (490)
T ss_pred             ccCCCccccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Cccee--CCC
Confidence            999999999999999643      245678999999999999999999999999999999999987543 22222  222


Q ss_pred             cccCCCceEEeecCCC
Q 036812          478 IPKATPLEVVLSPRLP  493 (499)
Q Consensus       478 ~~~~~~~~~~~~~r~~  493 (499)
                      ..|..++.+++++|.+
T Consensus       474 ~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        474 PRPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCCceEEEEeccC
Confidence            5677899999998874


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.8e-68  Score=525.12  Aligned_cols=437  Identities=19%  Similarity=0.260  Sum_probs=338.0

Q ss_pred             cccCCCCCccccccccccccCCC--CCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch
Q 036812            7 YQKAPEPAGAWPIIGHLHLLGGG--DQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA   84 (499)
Q Consensus         7 ~~~~~PgP~~~p~lG~~~~l~~~--~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~   84 (499)
                      ..++||||.++|++||++.+...  ..+++.++.+++++||++|++++++.++|+|+||+++++++.++...|..+....
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~  107 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS  107 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence            34689999999999999876311  1457888999999999999999999999999999999999998877775543322


Q ss_pred             hhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHH
Q 036812           85 AAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMT  164 (499)
Q Consensus        85 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~  164 (499)
                      ....++  +.++ +..+|+.|+++|+++. ++++.+.++.+.   .+++.++++.....+    ++  ++|+.+.+++++
T Consensus       108 ~~~~lg--~~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~----~~--~v~~~~~~~~~t  174 (472)
T PLN02987        108 ISNLLG--KHSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW----SS--RVLLMEEAKKIT  174 (472)
T ss_pred             HHHHhC--cccc-cccCcHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh----cc--ceehHHHHHHHH
Confidence            333343  2234 4457999999999986 555555554432   233444443332221    23  699999999999


Q ss_pred             HHHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHH
Q 036812          165 LNMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEE  244 (499)
Q Consensus       165 ~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  244 (499)
                      ++++++++||.+. +.      . ...+...+.......    ....+|++     ....++..++.+.+.+++.++|++
T Consensus       175 ~~vi~~~~fg~~~-~~------~-~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~  237 (472)
T PLN02987        175 FELTVKQLMSFDP-GE------W-TESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMK  237 (472)
T ss_pred             HHHHHHHHcCCCC-hH------H-HHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876 21      1 112222222222111    11223432     123456677888899999999999


Q ss_pred             HHHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHH
Q 036812          245 HRQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQE  324 (499)
Q Consensus       245 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~  324 (499)
                      +++....+   .....|+++.|++..  +      ++++++++++++++++||+|||+++++|++++|++||++|+++++
T Consensus       238 r~~~~~~~---~~~~~d~l~~ll~~~--~------~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~  306 (472)
T PLN02987        238 RRKEEEEG---AEKKKDMLAALLASD--D------GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKE  306 (472)
T ss_pred             HHhhhhcc---CcccccHHHHHHhcC--C------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHH
Confidence            87653321   122279999999753  1      588999999999999999999999999999999999999999999


Q ss_pred             HHHHhhC---CCCCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCC
Q 036812          325 ELDQQIG---MDRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWK  401 (499)
Q Consensus       325 Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~  401 (499)
                      |++++.+   +...++++++.+|||++||++|+||++|+++.. +|.+.+|++++||.||||+.|+++.+.+||||++|+
T Consensus       307 E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~  385 (472)
T PLN02987        307 EHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFK  385 (472)
T ss_pred             HHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCC
Confidence            9998864   235678999999999999999999999999865 899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccC
Q 036812          402 NPSAFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKA  481 (499)
Q Consensus       402 dp~~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  481 (499)
                      ||++|+||||++...   .......++|||+|+|.|+|++||.+|++++++.||++|++++.++.++..    ..+..|.
T Consensus       386 ~p~~F~PeRfl~~~~---~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~  458 (472)
T PLN02987        386 DARTFNPWRWQSNSG---TTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQ  458 (472)
T ss_pred             CccccCcccCCCCCC---CCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCC
Confidence            999999999997532   112345799999999999999999999999999999999999876543222    3366788


Q ss_pred             CCceEEeecCC
Q 036812          482 TPLEVVLSPRL  492 (499)
Q Consensus       482 ~~~~~~~~~r~  492 (499)
                      +++.+++++|.
T Consensus       459 ~~~~~~~~~r~  469 (472)
T PLN02987        459 KRYPINVKRRD  469 (472)
T ss_pred             CCceEEEEecc
Confidence            89999999984


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3e-67  Score=521.81  Aligned_cols=443  Identities=19%  Similarity=0.255  Sum_probs=338.9

Q ss_pred             cccccccccccCCCCCchhHHHHHHHhhhC-CceEEecCCccEEEecCHHHHHHHHHhccccccCCCcch-hh-hhccCC
Q 036812           16 AWPIIGHLHLLGGGDQLLYRTLGAMADKWG-PAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKTA-AA-KHMGYD   92 (499)
Q Consensus        16 ~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG-~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~~-~~-~~~~~~   92 (499)
                      ..++.|++....   .+.+..+..+.++++ .+++++.++.  ++++||+++++|+.++...|++..... .. ...+  
T Consensus        48 ~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--  120 (502)
T PLN02426         48 RAYLTASWAKDF---DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--  120 (502)
T ss_pred             CCCccHHHHHhc---ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--
Confidence            467889887755   345777767888886 5777765543  899999999999988766675543221 11 2222  


Q ss_pred             CceeeecCCChhHHHHHHHHhhhcCCHHHHHHhH--HHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHHHHH
Q 036812           93 YAVFGFAPYTPFWREMRKIATLELLSNRRLEALK--HVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNMVVR  170 (499)
Q Consensus        93 ~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~i~~  170 (499)
                       . .+++.+|+.|+++||.+. +.|+.++++.+.  +.+.+.++.+++.+.+......|.  ++|+.++++.+++|+|+.
T Consensus       121 -~-gi~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~vd~~~~~~~~t~dvi~~  195 (502)
T PLN02426        121 -R-GIFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGA--VLDLQDVFRRFSFDNICK  195 (502)
T ss_pred             -C-ceeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--eEcHHHHHHHHHHHHHHH
Confidence             2 356678999999999997 899999888763  677777888888887651112234  899999999999999999


Q ss_pred             HhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhh---chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          171 MVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWL---DWQGHEMAMKKTAKELDAILEGWLEEHRQ  247 (499)
Q Consensus       171 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  247 (499)
                      ++||.++ +.++...  ...++.+.++........ ......|+++++   .+.+..++..++.+.+.+++.++|+++++
T Consensus       196 ~~fG~~~-~~l~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~  271 (502)
T PLN02426        196 FSFGLDP-GCLELSL--PISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRK  271 (502)
T ss_pred             HHhCCCC-cccCCCC--CccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998 7652111  112344444433221111 111222433322   11233466777888899999999998875


Q ss_pred             hhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHHH
Q 036812          248 RRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEELD  327 (499)
Q Consensus       248 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei~  327 (499)
                      ...     +.. .|+++.++++.          .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++
T Consensus       272 ~~~-----~~~-~dll~~ll~~~----------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~  335 (502)
T PLN02426        272 LGF-----SAS-KDLLSRFMASI----------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEAD  335 (502)
T ss_pred             ccc-----CCc-chHHHHHHhcC----------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            421     123 79999999742          25788999999999999999999999999999999999999999999


Q ss_pred             HhhCCC-CCCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhccCCCCC-CCCC
Q 036812          328 QQIGMD-RQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTV-AGYHIPAGTRLIVNVWKIQRDPRVW-KNPS  404 (499)
Q Consensus       328 ~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~  404 (499)
                      ++++.+ ..++++++++||||+|||+|+||++||+|.. .|.+.+|.++ +|+.|||||.|.++.+++||||++| +||+
T Consensus       336 ~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~  414 (502)
T PLN02426        336 RVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCL  414 (502)
T ss_pred             HhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChh
Confidence            988753 4689999999999999999999999999987 6999988777 8999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCCCCCCccCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCc
Q 036812          405 AFQPERFLTSHTDVDFRGQQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPL  484 (499)
Q Consensus       405 ~F~P~R~l~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (499)
                      +|+||||++++.  .....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.........+++..|++++
T Consensus       415 ~F~PeRwl~~~~--~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl  492 (502)
T PLN02426        415 EFKPERWLKNGV--FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGL  492 (502)
T ss_pred             hcCccccCCCCC--cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCE
Confidence            999999997421  111245678999999999999999999999999999999999986432211222346777888999


Q ss_pred             eEEeecCCC
Q 036812          485 EVVLSPRLP  493 (499)
Q Consensus       485 ~~~~~~r~~  493 (499)
                      .|++++|..
T Consensus       493 ~v~~~~r~~  501 (502)
T PLN02426        493 PVRVRERVR  501 (502)
T ss_pred             EEEEEEccC
Confidence            999999853


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.6e-65  Score=461.50  Aligned_cols=445  Identities=21%  Similarity=0.333  Sum_probs=348.5

Q ss_pred             cCCCCCcc-ccccccccccCCCCCchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhccccccCCCcc--hh
Q 036812            9 KAPEPAGA-WPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTINDKALASRPKT--AA   85 (499)
Q Consensus         9 ~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~~~~~~~~~~~--~~   85 (499)
                      +.||--.+ +|++|++..+.   +++.++++++.+|||+||++.++|+.+.++.||+....+++.....++.....  ..
T Consensus        31 ~~PPli~gwiP~lG~a~~fg---k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG---KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHhc---cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            36777766 59999999998   79999999999999999999999999999999999999998764444333222  12


Q ss_pred             hhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHH
Q 036812           86 AKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTL  165 (499)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~  165 (499)
                      ...++.   +......+....++.+.+. ..+....++++.+.|.+++...++.  +-  ..+|.  ...+.+.+....+
T Consensus       108 ~~vFg~---~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~--~~--~~s~~--~d~l~~~~~~ii~  177 (486)
T KOG0684|consen  108 TPVFGK---GVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFET--SL--GESGE--TDGLYTFCRLIIF  177 (486)
T ss_pred             hhhcCC---CccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhc--cc--ccccc--hhHhhhhhHHHhh
Confidence            233432   3556666777788888887 6889999999999999999998887  11  22454  4445555555555


Q ss_pred             HHHHHHhccccccCCCCCCCcHHHHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 036812          166 NMVVRMVAGKRYFGASATCDDSEARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEH  245 (499)
Q Consensus       166 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  245 (499)
                      .+.-.++||... ..+    +.+...+...++..+.-.+     ..+|.  +++. ...++..++.+.+.+.+...|.++
T Consensus       178 tAs~~ll~~e~r-~~~----d~~~a~l~~dLd~~F~~~d-----~~FP~--~LP~-~~~r~~~ra~~~i~k~f~~~i~~r  244 (486)
T KOG0684|consen  178 TASRLLLGGEVR-DQL----DADVAKLYHDLDQGFQPFD-----FLFPY--NLPI-PLLRRRDRARKKISKIFSKIILDR  244 (486)
T ss_pred             hhHHHhhhhhhh-hhh----cchHHHHHHHHhccccchH-----hhccc--CCCc-chhhhHHHHHHHHHHHHHHHHHHH
Confidence            555555555544 332    2333344444444333222     23442  2221 234555688999999999999998


Q ss_pred             HHhhccCCCCCCchhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHH
Q 036812          246 RQRRVSGGIESESEQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEE  325 (499)
Q Consensus       246 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~E  325 (499)
                      ++..+.      ...|+++.+++..++    +. +.+++|+....+.+++||+.||+.+.+|++++|++|||+++.+++|
T Consensus       245 r~s~s~------~~~dmlq~l~~~y~d----g~-~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE  313 (486)
T KOG0684|consen  245 RASISK------WDNDMLQSLMEKYKD----GR-PTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREE  313 (486)
T ss_pred             Hhcccc------ccHHHHHHHHHHhhc----CC-cCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHH
Confidence            876432      227999999983332    33 7899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCC-CCChhhccCChhHHHHHHHHhccCCCCCCCCcccccccccccc----eeeCCCCEEEEehhhhccCCCCC
Q 036812          326 LDQQIGMDR-QVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAG----YHIPAGTRLIVNVWKIQRDPRVW  400 (499)
Q Consensus       326 i~~~~~~~~-~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g----~~ip~G~~v~~~~~~~~~d~~~~  400 (499)
                      +++++|.+. .++++.+++||.|++||+|||||+||.+.. .|.+.+|.++.+    |.||+|..|.+++..+|+||++|
T Consensus       314 ~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif  392 (486)
T KOG0684|consen  314 QKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF  392 (486)
T ss_pred             HHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCcccc
Confidence            999998754 499999999999999999999999999987 899999998876    99999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccC--CccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCccc
Q 036812          401 KNPSAFQPERFLTSHTDVDFRG--QQFELIPFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTI  478 (499)
Q Consensus       401 ~dp~~F~P~R~l~~~~~~~~~~--~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  478 (499)
                      +||+.|+|+||+++++.....+  -++++||||+|+|.|||+.||.+|++.++..+|++||+++.+++.++... ...+.
T Consensus       393 ~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~-s~~v~  471 (486)
T KOG0684|consen  393 PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDY-SRMVM  471 (486)
T ss_pred             CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCH-HHhhc
Confidence            9999999999997764332222  34567999999999999999999999999999999999999874333332 24477


Q ss_pred             ccCCCceEEeecCC
Q 036812          479 PKATPLEVVLSPRL  492 (499)
Q Consensus       479 ~~~~~~~~~~~~r~  492 (499)
                      .|.++++++.+.|+
T Consensus       472 ~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  472 QPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCCCceEEEeecC
Confidence            88999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=4.1e-60  Score=463.37  Aligned_cols=414  Identities=16%  Similarity=0.180  Sum_probs=297.0

Q ss_pred             cccCCCCCccccccccccccCC--CCCchhHHHHHHHhhhCC-ceEEecCCccE-------EEecCHHHHHHHHHh----
Q 036812            7 YQKAPEPAGAWPIIGHLHLLGG--GDQLLYRTLGAMADKWGP-AFNIRLGSRSA-------FVVSSWEVVKECFTI----   72 (499)
Q Consensus         7 ~~~~~PgP~~~p~lG~~~~l~~--~~~~~~~~~~~~~~~yG~-v~~i~~g~~~~-------v~v~dp~~i~~i~~~----   72 (499)
                      +.+.|||+.|||++|+++.+..  ...++..++.+..+|||+ ||++.++|.+.       |+++||++++.+|..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            3467999999999999986653  124567999999999999 99999988655       999999999999975    


Q ss_pred             ccccccCCCcchhhhhccCCCceeeecCCChhHHHHHHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q 036812           73 NDKALASRPKTAAAKHMGYDYAVFGFAPYTPFWREMRKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPV  152 (499)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~  152 (499)
                      +...+..... .....+|......++..+|+.|+++|+++. ++|+ ..++.+.+.|.++++.+++.|...  ...|.  
T Consensus        95 ~~~~~~~~~~-~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~--~~~~~--  167 (480)
T PLN02648         95 KRDVFTGTYM-PSTAFTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAE--LAKKG--  167 (480)
T ss_pred             ccccceeeec-cCccccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHH--HhhCC--
Confidence            3232332211 122233322112456778999999999998 8998 577899999999999999999654  24455  


Q ss_pred             eeehHHHHHHHHHHHHHHHhccccccCCCCCCCcHHH-HHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHH
Q 036812          153 LVELKKWLEDMTLNMVVRMVAGKRYFGASATCDDSEA-RQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTA  231 (499)
Q Consensus       153 ~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  231 (499)
                      ++|+.+.++.+++|++++++||.+. +.      ... ..+......+...       ..+|.....             
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~-~~------~~l~~~~~~~~~~~~~~-------~~~p~~~~~-------------  220 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDP-SE------TALGSDGPALIQKWLAL-------QLAPLASTG-------------  220 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCc-ch------hhhccchhHHHHHHHHH-------HhhHHHHcC-------------
Confidence            7999999999999999999999977 32      101 1111111111110       001111000             


Q ss_pred             HHHHHHHHHHHHHHHHhh--ccCCCCCCc------hhhHHHHHHHHhhcCCccccCCCCcHHHHHHHHH-HhhccchhhH
Q 036812          232 KELDAILEGWLEEHRQRR--VSGGIESES------EQDFIDVMLSLQEEGHLSQFQHSADISIKSTCLA-LILGGSDTTS  302 (499)
Q Consensus       232 ~~l~~~~~~~i~~~~~~~--~~~~~~~~~------~~dll~~ll~~~~~~~~~~~~~l~~~~i~~~~~~-~~~AG~~tta  302 (499)
                        +...+++++.++....  ...   ...      -.+.++.+++...+.      ++++++++++++. +.+++++||+
T Consensus       221 --l~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~------~l~~~ei~~~~l~~~~~~t~~~~~  289 (480)
T PLN02648        221 --LPHVLEELLLHTFPLPFFLVK---SDYDKLYDFFRASATEALDLAEKF------GISREEALHNLLFVLGFNAFGGFK  289 (480)
T ss_pred             --chHHHHHHhhcccCCchhhhh---ccHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHhhHHHH
Confidence              0011111111100000  000   000      012223444433332      6899999999875 4467788888


Q ss_pred             hhHHHHHHHHhcCch-hHHHHHHHHHHhhCC-CCCCChhhccCChhHHHHHHHHhccCCCCCCCCccccccccccc----
Q 036812          303 GTLTWAISLLLNNPN-MLKKAQEELDQQIGM-DRQVDDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVA----  376 (499)
Q Consensus       303 ~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~----  376 (499)
                      ++++|++|+|++||+ +|+++++|++++.+. +..++++++++||||++||+|+||++|++++. .|.+.+|++++    
T Consensus       290 ~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~  368 (480)
T PLN02648        290 IFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDA  368 (480)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCEEEecCCc
Confidence            999999999999995 999999999998863 45789999999999999999999999999988 68889999996    


Q ss_pred             ceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCcc----CCccccccCCCCCCCCccHHHHHHHHHHHHH
Q 036812          377 GYHIPAGTRLIVNVWKIQRDPRVWKNPSAFQPERFLTSHTDVDFR----GQQFELIPFGSGRRSCPGASFALQVLHLTLA  452 (499)
Q Consensus       377 g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~----~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~  452 (499)
                      ||.||||+.|+++.+.+||||++|+||++|||+||++++......    +.....++||+|+|.|+|++||++|++++++
T Consensus       369 g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la  448 (480)
T PLN02648        369 AFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVA  448 (480)
T ss_pred             eEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999998653211000    0011223346778999999999999999999


Q ss_pred             HHHHhcc-ccCCCCC
Q 036812          453 RLLHAFE-LATPSDQ  466 (499)
Q Consensus       453 ~ll~~f~-~~~~~~~  466 (499)
                      .|+++|+ +++.++.
T Consensus       449 ~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        449 ELFLRYDSFEIEVDT  463 (480)
T ss_pred             HHHHHhCEEeecCCc
Confidence            9999998 9987654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.8e-55  Score=423.65  Aligned_cols=383  Identities=27%  Similarity=0.385  Sum_probs=303.8

Q ss_pred             hhHHHHHHHhhhCCceEEecCCcc--EEEecCHHHHHHHHHhccccccCCCcchhhh--hccCCCceeeecCCChhHHHH
Q 036812           33 LYRTLGAMADKWGPAFNIRLGSRS--AFVVSSWEVVKECFTINDKALASRPKTAAAK--HMGYDYAVFGFAPYTPFWREM  108 (499)
Q Consensus        33 ~~~~~~~~~~~yG~v~~i~~g~~~--~v~v~dp~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  108 (499)
                      +......+.+.||.++.++..++.  .+++++++.++++++++. .++.........  .....+.+.++..||+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            355667788899999888765554  899999999999998763 222221111110  011111233667889999999


Q ss_pred             HHHHhhhcCCHHHHHHhHHHHHHHHHHHHHHHHHHHhhhCCCCceeehHHHHHHHHHHHHHHHhccccccCCCCCCCcHH
Q 036812          109 RKIATLELLSNRRLEALKHVRISEVDMGLRDLHGLWAKNNSRPVLVELKKWLEDMTLNMVVRMVAGKRYFGASATCDDSE  188 (499)
Q Consensus       109 Rk~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~vdl~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~  188 (499)
                      ||+++ ++|+++.++++.+.+.+.++++++.+ ..   .  +  .+++.+....+++++|+ .+||.+. +      +  
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~--~--~~~v~~~a~~l~~~vi~-~l~Gv~~-~------~--  163 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ---G--G--ADLVLDFAAELTLRVIA-ELLGVPL-E------D--  163 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc---C--C--chhHHHHhhhhhHHHHH-HHhCCCH-H------H--
Confidence            99998 89999999999999999999999998 43   2  4  79999999999999999 9999998 2      2  


Q ss_pred             HHHHHHHHHHHHhhhcchhhccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCchhhHHHHHHH
Q 036812          189 ARQCQKAINQFFHLIGIFTVSDALPFFWWLDWQGHEMAMKKTAKELDAILEGWLEEHRQRRVSGGIESESEQDFIDVMLS  268 (499)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~dll~~ll~  268 (499)
                      ...+............        |...   ......+..++..++.+++.++|++++.        ... +|+++.|+.
T Consensus       164 ~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~--------~~~-~dlls~l~~  223 (411)
T COG2124         164 RPQLLRWSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRA--------APR-DDLLSLLLS  223 (411)
T ss_pred             HHHHHHHHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc--------CCc-ccHHHHHHH
Confidence            1233333322222100        1111   1122466778889999999999999882        233 899999999


Q ss_pred             HhhcCCccccCCCCcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHHHHhhCCCCCCChhhccCChhHH
Q 036812          269 LQEEGHLSQFQHSADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEELDQQIGMDRQVDDSDIKNLVYLQ  348 (499)
Q Consensus       269 ~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~  348 (499)
                      +.+++.   . .+|++||+++++.+++||+|||+++++|+++.|++||++++++++|.+.                ||++
T Consensus       224 a~~~~~---~-~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~  283 (411)
T COG2124         224 AEDDGG---G-RLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLE  283 (411)
T ss_pred             HhhCCC---C-cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHH
Confidence            887651   1 4999999999999999999999999999999999999999999999874                7999


Q ss_pred             HHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCCCccCCccccc
Q 036812          349 AIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIVNVWKIQRDPRVWKNPSAFQPERFLTSHTDVDFRGQQFELI  428 (499)
Q Consensus       349 a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~  428 (499)
                      ++|+|+||++||++. +.|.+.+|++++|+.||||+.|.++.+++||||++|+||++|||+||.            ..++
T Consensus       284 ~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l  350 (411)
T COG2124         284 AVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHL  350 (411)
T ss_pred             HHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCc
Confidence            999999999999999 599999999999999999999999999999999999999999999998            2469


Q ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCcccccCCCceEEeecC
Q 036812          429 PFGSGRRSCPGASFALQVLHLTLARLLHAFELATPSDQPVDMTESPGLTIPKATPLEVVLSPR  491 (499)
Q Consensus       429 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  491 (499)
                      |||+|+|.|+|.+||++|++++++.+|++|++....+ ....  ....+..+..+.++.++.|
T Consensus       351 ~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~--~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         351 PFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPL--VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCc--cccccccCCCcceeeeecC
Confidence            9999999999999999999999999999999887665 2112  2233344556677776654


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=73.49  E-value=2.1  Score=28.32  Aligned_cols=8  Identities=50%  Similarity=1.024  Sum_probs=6.6

Q ss_pred             CCCCCCCC
Q 036812          407 QPERFLTS  414 (499)
Q Consensus       407 ~P~R~l~~  414 (499)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            88999964


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=59.73  E-value=29  Score=21.92  Aligned_cols=43  Identities=19%  Similarity=0.184  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHH
Q 036812          284 ISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEEL  326 (499)
Q Consensus       284 ~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei  326 (499)
                      -++..++..++-.|.|..+-+++-.|....-||+....+-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3567777888888888888888888888888999888877776


No 35 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=49.83  E-value=13  Score=29.21  Aligned_cols=24  Identities=17%  Similarity=0.380  Sum_probs=17.3

Q ss_pred             CCCccHHHHHHHHHHHHHHHHHhc
Q 036812          435 RSCPGASFALQVLHLTLARLLHAF  458 (499)
Q Consensus       435 r~C~G~~~A~~e~~~~l~~ll~~f  458 (499)
                      -.|.|+.||+.++-.+|..++..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            479999999999999999999764


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.77  E-value=18  Score=23.79  Aligned_cols=24  Identities=29%  Similarity=0.422  Sum_probs=18.8

Q ss_pred             HHHHHHhcCchhHHHHHHHHHHhh
Q 036812          307 WAISLLLNNPNMLKKAQEELDQQI  330 (499)
Q Consensus       307 ~~l~~L~~~p~~~~~l~~Ei~~~~  330 (499)
                      -++.||.+||++.+++.+.=.+.+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEe
Confidence            467899999999999988554443


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=35.49  E-value=1.2e+02  Score=22.91  Aligned_cols=58  Identities=17%  Similarity=0.202  Sum_probs=37.5

Q ss_pred             CCCCCccccccccccccCCCCCchhHHHHHHHhhhCCceEEecCC------ccEEEecCHHHHHHHHHh
Q 036812           10 APEPAGAWPIIGHLHLLGGGDQLLYRTLGAMADKWGPAFNIRLGS------RSAFVVSSWEVVKECFTI   72 (499)
Q Consensus        10 ~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~~~~yG~v~~i~~g~------~~~v~v~dp~~i~~i~~~   72 (499)
                      +||--..+-++-|+..     +-..+-+-++.-+||+|..|++|.      .-+||-.|-..++..+.+
T Consensus        13 lppevnriLyirNLp~-----~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   13 LPPEVNRILYIRNLPF-----KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CChhhheeEEEecCCc-----cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3443334444444432     223556677888999999999874      346777788888877754


No 38 
>PRK06789 flagellar motor switch protein; Validated
Probab=34.90  E-value=34  Score=24.03  Aligned_cols=39  Identities=15%  Similarity=0.123  Sum_probs=32.6

Q ss_pred             HHHHhccCCCCCCCCcccccccc--cccceeeCCCCEEEEe
Q 036812          351 IKETLRLYPAGPLLGPREAMEDC--TVAGYHIPAGTRLIVN  389 (499)
Q Consensus       351 i~E~lRl~~~~~~~~~R~~~~~~--~i~g~~ip~G~~v~~~  389 (499)
                      ++|.+.+.+-.-+.+-|.+.+++  .++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            78999999988887788887664  5589999999999875


No 39 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=32.51  E-value=32  Score=29.63  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=31.9

Q ss_pred             ChhHHHHHHHHhccCCCCCCCCcccccccccccceeeCCCCEEEE
Q 036812          344 LVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYHIPAGTRLIV  388 (499)
Q Consensus       344 lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~  388 (499)
                      -..+.|||.|+.-+..-.-+  .-...+|+.++|..|||||.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRV--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEE--EEEEcCceEECCEEeCCCCEEEE
Confidence            34677888888766544332  23556889999999999999876


No 40 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=31.80  E-value=1.4e+02  Score=21.68  Aligned_cols=49  Identities=10%  Similarity=0.110  Sum_probs=41.3

Q ss_pred             CcHHHHHHHHHHhhccchhhHhhHHHHHHHHhcCchhHHHHHHHHHHhh
Q 036812          282 ADISIKSTCLALILGGSDTTSGTLTWAISLLLNNPNMLKKAQEELDQQI  330 (499)
Q Consensus       282 ~~~~i~~~~~~~~~AG~~tta~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  330 (499)
                      +.+.........++-=+..++..+.-.+.+.++||+..++|.+.+.+.+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4555666777788888999999999999999999999999999987643


No 41 
>PHA03162 hypothetical protein; Provisional
Probab=29.02  E-value=33  Score=26.80  Aligned_cols=28  Identities=25%  Similarity=0.433  Sum_probs=23.7

Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhc
Q 036812          431 GSGRRSCPGASFALQVLHLTLARLLHAF  458 (499)
Q Consensus       431 g~G~r~C~G~~~A~~e~~~~l~~ll~~f  458 (499)
                      ++|.+.|||+...+.|+..=|+.|=.+.
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLqmEN   29 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQLEN   29 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHHHHH
Confidence            4699999999999999988888875554


No 42 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=28.98  E-value=54  Score=21.28  Aligned_cols=18  Identities=17%  Similarity=0.279  Sum_probs=15.6

Q ss_pred             hCCceEEecCCccEEEec
Q 036812           44 WGPAFNIRLGSRSAFVVS   61 (499)
Q Consensus        44 yG~v~~i~~g~~~~v~v~   61 (499)
                      -|+++++..||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999998874


No 43 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=26.56  E-value=1.8e+02  Score=18.56  Aligned_cols=34  Identities=15%  Similarity=0.110  Sum_probs=23.6

Q ss_pred             HHHHhhhCCceEEecCC----ccEEEecCHHHHHHHHH
Q 036812           38 GAMADKWGPAFNIRLGS----RSAFVVSSWEVVKECFT   71 (499)
Q Consensus        38 ~~~~~~yG~v~~i~~g~----~~~v~v~dp~~i~~i~~   71 (499)
                      .++-.+||+|..+.+..    .-.|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            46678999998887533    23555569998888875


No 44 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=25.07  E-value=33  Score=22.10  Aligned_cols=10  Identities=60%  Similarity=1.235  Sum_probs=8.7

Q ss_pred             cCCCCCCCCc
Q 036812          429 PFGSGRRSCP  438 (499)
Q Consensus       429 ~Fg~G~r~C~  438 (499)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999985


No 45 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=23.33  E-value=1.6e+02  Score=23.20  Aligned_cols=41  Identities=12%  Similarity=0.081  Sum_probs=31.7

Q ss_pred             CchhHHHHHHHhhhCCceEEecCCccEEEecCHHHHHHHHHhc
Q 036812           31 QLLYRTLGAMADKWGPAFNIRLGSRSAFVVSSWEVVKECFTIN   73 (499)
Q Consensus        31 ~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dp~~i~~i~~~~   73 (499)
                      .+....+.+|.++||.+--.  .+...+...|++.++++....
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            45678999999999975432  235677888999999998654


No 46 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=22.90  E-value=2.6e+02  Score=19.17  Aligned_cols=25  Identities=8%  Similarity=0.090  Sum_probs=20.5

Q ss_pred             HhhHHHHHHHHhcCchhHHHHHHHH
Q 036812          302 SGTLTWAISLLLNNPNMLKKAQEEL  326 (499)
Q Consensus       302 a~~l~~~l~~L~~~p~~~~~l~~Ei  326 (499)
                      +.+.+-++--++|+||.+.+++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4566777888999999999998765


No 47 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=22.65  E-value=42  Score=29.02  Aligned_cols=23  Identities=26%  Similarity=0.687  Sum_probs=19.2

Q ss_pred             Eehhhh-ccCCCCCCCCCCCCCCC
Q 036812          388 VNVWKI-QRDPRVWKNPSAFQPER  410 (499)
Q Consensus       388 ~~~~~~-~~d~~~~~dp~~F~P~R  410 (499)
                      ++-|.- |-|+.+|.|..-|+|-|
T Consensus       188 iPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  188 IPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCcccccCccccCCCC
Confidence            345554 99999999999999988


No 48 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.30  E-value=1.2e+02  Score=18.07  Aligned_cols=12  Identities=8%  Similarity=0.326  Sum_probs=9.4

Q ss_pred             hcCchhHHHHHH
Q 036812          313 LNNPNMLKKAQE  324 (499)
Q Consensus       313 ~~~p~~~~~l~~  324 (499)
                      .+||++++.++.
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            489999888764


No 49 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=21.15  E-value=1.8e+02  Score=27.09  Aligned_cols=71  Identities=17%  Similarity=0.265  Sum_probs=43.5

Q ss_pred             hHHHHHHHHhccCCCCCC---CCccccccccccc----ceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCCCCCCCCC
Q 036812          346 YLQAIIKETLRLYPAGPL---LGPREAMEDCTVA----GYHIPAGTRLIVNVWKIQRDPRVWKNPSAFQPERFLTSHTDV  418 (499)
Q Consensus       346 ~l~a~i~E~lRl~~~~~~---~~~R~~~~~~~i~----g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~  418 (499)
                      +=+.+++.|..+.||...   .+.-.++.|..+=    .-.|..||.|.++                             
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-----------------------------  324 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-----------------------------  324 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-----------------------------
Confidence            446778888899998744   3333444553331    3567788876663                             


Q ss_pred             CccCCccccccCCCCCCCCccHHHHHHHHHHHH
Q 036812          419 DFRGQQFELIPFGSGRRSCPGASFALQVLHLTL  451 (499)
Q Consensus       419 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l  451 (499)
                         ++++.++-||-+  +-+|+++|. |++.++
T Consensus       325 ---GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 ---GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             ---CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence               234445555533  568999998 666554


No 50 
>PRK05933 type III secretion system protein; Validated
Probab=20.24  E-value=73  Score=29.51  Aligned_cols=44  Identities=18%  Similarity=0.135  Sum_probs=35.0

Q ss_pred             hHHHHHHHHhccCCCCCCCCcccc---cccccccceeeCCCCEEEEe
Q 036812          346 YLQAIIKETLRLYPAGPLLGPREA---MEDCTVAGYHIPAGTRLIVN  389 (499)
Q Consensus       346 ~l~a~i~E~lRl~~~~~~~~~R~~---~~~~~i~g~~ip~G~~v~~~  389 (499)
                      -..--|+|.|+|.+-.-+-+-|.+   .-|+.++|..|.+|..|.++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            345568999999999888766664   34567799999999999885


Done!