BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036831
(91 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 1 MDQTYEKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVI 51
M +TYE +ECL+ N+ K VTE L+PL QLS S RIVN+SS G LK +
Sbjct: 138 MSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 35.0 bits (79), Expect = 0.011, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 2 DQTYEKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQL 48
+ T + ++ E + + R+T ALLP + S +VN+SSF GQL
Sbjct: 97 ETTERELRDLFELHVFGPARLTRALLPQXRERGSGSVVNISSFGGQL 143
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 2 DQTYEKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVY 61
D+ +E LE N R T + L ++ RIVN++S G ++ GQ NYV
Sbjct: 101 DEDWEA---VLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG---ILGNPGQANYVA 154
Query: 62 LK 63
K
Sbjct: 155 SK 156
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A+L + RI+N+ S G + GQ NY K
Sbjct: 108 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---GNAGQANYAAAK 162
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A+L + RI+N+ S G + GQ NY K
Sbjct: 108 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---GNAGQANYAAAK 162
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A+L + RI+N+ S G + GQ NY K
Sbjct: 108 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---GNAGQANYAAAK 162
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A+L + RI+N+ S G + GQ NY K
Sbjct: 108 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---GNAGQANYAAAK 162
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 30.4 bits (67), Expect = 0.28, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 7 KTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSF 44
K + L+TNF+ T+ + LLP+ + R+VN+SS
Sbjct: 103 KAEMTLKTNFFATRNMCNELLPI--MKPHGRVVNISSL 138
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 30.0 bits (66), Expect = 0.38, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQ 47
E ++ +TN +T+A+LP+ Q S IVN+ S G+
Sbjct: 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 29.6 bits (65), Expect = 0.44, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSS 43
++TNF+ T+ V LLPL + R+VN+SS
Sbjct: 110 MKTNFFGTRDVXTELLPL--IKPQGRVVNVSS 139
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSS 43
++TNF+ T+ V LLPL + R+VN+SS
Sbjct: 110 MKTNFFGTRDVCTELLPL--IKPQGRVVNVSS 139
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A+L + RI+N+ S G + GQ N+ K
Sbjct: 108 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---GNAGQANFAAAK 162
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 10 ECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
+ + TN R+++A+L ++ RI+N+ S G + GQTNY K
Sbjct: 130 DVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAM---GNAGQTNYAAAK 180
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 28.9 bits (63), Expect = 0.74, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYG 46
++TNF T+ V LLPL + R+VN+SS G
Sbjct: 110 MKTNFMGTRNVCTELLPL--IKPQGRVVNVSSTEG 142
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 10 ECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
+ L TN T+A+ + KS +I+N++S G +I GQ NY K
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAG---IIGNAGQANYAASK 159
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
++ ++TN R++ A+L ++ RIVN++S G GQ NY K
Sbjct: 127 DEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGS---AGNPGQVNYAAAK 181
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + ETN R+++A+L + RI+N+ S G GQ NY K
Sbjct: 105 EEWSDIXETNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVG---TXGNAGQANYAAAK 159
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 28.5 bits (62), Expect = 0.98, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
+ N +R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 316 IAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAG---IAGNRGQTNYATTK 364
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 6 EKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E+ + +ETN R+++A++ + RI+ + S G + GQ NY K
Sbjct: 101 EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM---GNGGQANYAAAK 155
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
L N R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 324 LAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAG---IAGNRGQTNYATTK 372
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
L N R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 308 LAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAG---IAGNRGQTNYATTK 356
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
L N R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 300 LAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAG---IAGNRGQTNYATTK 348
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
L N R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 337 LAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAG---IAGNRGQTNYATTK 385
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 12 LETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
L N R+TE L+ + + R++ +SS G + GQTNY K
Sbjct: 316 LAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAG---IAGNRGQTNYATTK 364
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 10 ECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLK 63
E ++ N T+A + + RI+N++S G +I +GQ NY K
Sbjct: 105 EVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG---LIGNIGQANYAAAK 155
>pdb|1H96|A Chain A, Recombinant Mouse L-Chain Ferritin
pdb|1LB3|A Chain A, Structure Of Recombinant Mouse L Chain Ferritin At 1.2 A
Resolution
Length = 182
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 5 YEKTKECLETNFYRTKRVTEALLPLQQLSKSARIVNMSSFY------GQLKVIKEMG 55
+ KT+E +E K + +ALL L L + ++ F ++K+IK+MG
Sbjct: 89 WGKTQEAMEAALAMEKNLNQALLDLHALGSARADPHLCDFLESHYLDKEVKLIKKMG 145
>pdb|2COU|A Chain A, Solution Structure Of The Second Brct Domain Of Epithelial
Cell Transforming 2
Length = 109
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 27 LPLQQLSKSARIVNMSSFYGQLKVIKEMGQTNYVYLKFETNNS 69
LP + SK +V F+G +++ G+T Y+Y K T S
Sbjct: 63 LPFEP-SKKLFVVKQEWFWGSIQMDARAGETMYLYEKANTPES 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.129 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,083,036
Number of Sequences: 62578
Number of extensions: 58090
Number of successful extensions: 175
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 163
Number of HSP's gapped (non-prelim): 38
length of query: 91
length of database: 14,973,337
effective HSP length: 58
effective length of query: 33
effective length of database: 11,343,813
effective search space: 374345829
effective search space used: 374345829
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)