BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036836
(122 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPU|A Chain A, Crystal Structure Of The Glutathione-S-Transferase Xi From
Phanerochaete Chrysosporium
pdb|3PPU|B Chain B, Crystal Structure Of The Glutathione-S-Transferase Xi From
Phanerochaete Chrysosporium
Length = 352
Score = 119 bits (298), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
Query: 5 GWVFPATDTEEPGAEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAE 64
GW F D P A+ DPLN A+ + LY +Y +FTVPVLWDK TIVNNES+E
Sbjct: 118 GWPFANVD-PFPAADSDPLNNAQHVKDLYLKVKPDYDGRFTVPVLWDKHTGTIVNNESSE 176
Query: 65 IIRMFNTEFNDIA--ENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYD 121
IIR FNT FN + + A LDL+P R +ID N+W+Y+ +NNGVY+ GFA+ Q Y+
Sbjct: 177 IIRXFNTAFNHLLPEDKAKLDLYPESLRAKIDEVNDWVYDTVNNGVYKSGFASTQKAYE 235
>pdb|3R3E|A Chain A, The Glutathione Bound Structure Of Yqjg, A Glutathione
Transferase Homolog From Escherichia Coli K-12
pdb|3R3E|B Chain B, The Glutathione Bound Structure Of Yqjg, A Glutathione
Transferase Homolog From Escherichia Coli K-12
pdb|4G0I|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg Of Escherichia
Coli
pdb|4G0I|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg Of Escherichia
Coli
pdb|4G0K|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gs-menadione
pdb|4G0K|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gs-menadione
pdb|4G0L|A Chain A, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gsh
pdb|4G0L|B Chain B, Glutathionyl-hydroquinone Reductase, Yqjg, Of E.coli
Complexed With Gsh
Length = 328
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MRHRGWVFPATDTEEPGAEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNN 60
M GW F D PGA D L + + LY A +YS + TVPVLWDKK TIV+N
Sbjct: 91 MLENGWTF---DDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSN 147
Query: 61 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPY 120
ESAEIIRMFNT F+ + A D +P + +ID N WIY+ +NNGVY+ GFAT Q Y
Sbjct: 148 ESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAY 206
Query: 121 DE 122
DE
Sbjct: 207 DE 208
>pdb|4FQU|A Chain A, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|B Chain B, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|C Chain C, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|D Chain D, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|E Chain E, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|F Chain F, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|G Chain G, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
pdb|4FQU|H Chain H, Glutathionyl-hydroquinone Reductase Pcpf Of Sphingobium
Chlorophenolicum
Length = 313
Score = 98.6 bits (244), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 1 MRHRGWVFPATDTEEPGAEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNN 60
M GW F D PD +NGA + +Y A Y+ + T+P+LWDK K I+NN
Sbjct: 81 MGENGWTFLPGDD----VVPDSINGADYLYQVYTAADPTYTGRVTIPILWDKVEKRILNN 136
Query: 61 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPY 120
ES+EIIR+ N+ F+D+ D +P++ R +ID N +Y +NNGVYR GFAT Q Y
Sbjct: 137 ESSEIIRILNSAFDDVGALPG-DYYPAEFRPEIDRINARVYETLNNGVYRSGFATTQEAY 195
Query: 121 DE 122
+E
Sbjct: 196 EE 197
>pdb|3M1G|A Chain A, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
pdb|3M1G|B Chain B, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
pdb|3M1G|C Chain C, The Structure Of A Putative Glutathione S-Transferase From
Corynebacterium Glutamicum
Length = 362
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 39 NYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNE 98
+Y R TVP L ++ K +V N+ I FN E+ + +L+P++ R++ +
Sbjct: 131 DYPRGITVPALVEESSKKVVTNDYPSITIDFNLEWKQFHREGAPNLYPAELREEXAPVXK 190
Query: 99 WIYNGINNGVYRCGFATKQGPYDE 122
I+ +NNGVYR GFA Q ++E
Sbjct: 191 RIFTEVNNGVYRTGFAGSQEAHNE 214
>pdb|1RHI|3 Chain 3, Human Rhinovirus 3 Coat Protein
Length = 236
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 61 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGI 104
+ +I M NT ND N + LH Q +QI GT +I +G+
Sbjct: 48 QVGTLIPMNNTGTNDNVTNYLIPLHADRQNEQIFGTKLYIGDGV 91
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
25 Structures
Length = 191
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 26 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 82
Query: 81 SL 82
SL
Sbjct: 83 SL 84
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 8 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 64
Query: 81 SL 82
SL
Sbjct: 65 SL 66
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 8 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 64
Query: 81 SL 82
SL
Sbjct: 65 SL 66
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 24 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 80
Query: 81 SL 82
SL
Sbjct: 81 SL 82
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 4 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 81 SL 82
SL
Sbjct: 61 SL 62
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 8 PLSLGIETMGGVM---TTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNK 64
Query: 81 SL 82
SL
Sbjct: 65 SL 66
>pdb|2GOV|A Chain A, Solution Structure Of Murine P22hbp
Length = 195
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 58 VNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRC-GFATK 116
V E E I +++T+F A+ A H + R ++GT Y G VY C G+
Sbjct: 125 VKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPA-TYQG---DVYYCAGYDPP 180
Query: 117 QGPY 120
PY
Sbjct: 181 MKPY 184
>pdb|2HVA|A Chain A, Solution Structure Of The Haem-Binding Protein P22hbp
Length = 192
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 58 VNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRC-GFATK 116
V E E I +++T+F A+ A H + R ++GT Y G VY C G+
Sbjct: 122 VKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPA-TYQG---DVYYCAGYDPP 177
Query: 117 QGPY 120
PY
Sbjct: 178 MKPY 181
>pdb|4A1M|A Chain A, Nmr Structure Of Protoporphyrin-Ix Bound Murine P22hbp
Length = 195
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 58 VNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRC-GFATK 116
V E E I +++T+F A+ A H + R ++GT Y G VY C G+
Sbjct: 125 VKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPA-TYQG---DVYYCAGYDPP 180
Query: 117 QGPY 120
PY
Sbjct: 181 MKPY 184
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 396 PLSLGIETMGGV---MTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 452
Query: 81 SL 82
SL
Sbjct: 453 SL 454
>pdb|3ABO|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And Ethanolamine
pdb|3ABO|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And Ethanolamine
pdb|3ABQ|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
2-Amino-1-Propanol
pdb|3ABQ|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
2-Amino-1-Propanol
pdb|3ABR|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl (Substrate-Free
Form)
pdb|3ABR|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl (Substrate-Free
Form)
pdb|3ABS|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escheri Complexed With Adeninylpentylcobalamin And
Ethanolamine
pdb|3ABS|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escheri Complexed With Adeninylpentylcobalamin And
Ethanolamine
pdb|3ANY|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(R)-2-Amino-1-Propanol
pdb|3ANY|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(R)-2-Amino-1-Propanol
pdb|3AO0|A Chain A, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(S)-2-Amino-1-Propanol
pdb|3AO0|C Chain C, Crystal Structure Of Ethanolamine Ammonia-Lyase From
Escherichia Coli Complexed With Cn-Cbl And
(S)-2-Amino-1-Propanol
Length = 453
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 65 IIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGV 108
+I+ NT I S L P+D RD + IY G++ GV
Sbjct: 143 VIKKANTTIG-IPGTFSARLQPNDTRDDVQSIAAQIYEGLSFGV 185
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 25.4 bits (54), Expect = 7.4, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T GG+ +T ++ T+P + T +N+SA I + E A+N
Sbjct: 396 PLSLGIETXGGV---XTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 452
Query: 81 SL 82
SL
Sbjct: 453 SL 454
>pdb|3RWX|A Chain A, Crystal Structure Of A Hypothetical Bacterial Outer
Membrane Protein (Bf2706) From Bacteroides Fragilis
Nctc 9343 At 2.40 A Resolution
Length = 261
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 20/45 (44%)
Query: 21 DPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEI 65
D N A+ I G YE S FT V + + TIV NE I
Sbjct: 6 DGTNXAQEIAGXYEGYSIGNCAXFTDYVXGEXSVATIVPNEDGTI 50
>pdb|2V42|A Chain A, Crystal Structure Of Rseb: A Sensor For Periplasmic Stress
Response In E. Coli
pdb|2V42|B Chain B, Crystal Structure Of Rseb: A Sensor For Periplasmic Stress
Response In E. Coli
pdb|2V43|C Chain C, Crystal Structure Of Rseb: A Sensor For Periplasmic Stress
Response In E. Coli
pdb|2V43|A Chain A, Crystal Structure Of Rseb: A Sensor For Periplasmic Stress
Response In E. Coli
pdb|2V43|B Chain B, Crystal Structure Of Rseb: A Sensor For Periplasmic Stress
Response In E. Coli
Length = 303
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 15 EPGAEPDPLNGAKTIGGLYELASTNYSR 42
EPG EP LNG + L L T++ R
Sbjct: 73 EPGLEPFTLNGDYIVDSLPSLIYTDFKR 100
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,212,674
Number of Sequences: 62578
Number of extensions: 161218
Number of successful extensions: 287
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 275
Number of HSP's gapped (non-prelim): 26
length of query: 122
length of database: 14,973,337
effective HSP length: 84
effective length of query: 38
effective length of database: 9,716,785
effective search space: 369237830
effective search space used: 369237830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)