BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036836
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42620|YQJG_ECOLI Glutathionyl-hydroquinone reductase YqjG OS=Escherichia coli
(strain K12) GN=yqjG PE=1 SV=1
Length = 328
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 1 MRHRGWVFPATDTEEPGAEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNN 60
M GW F D PGA D L + + LY A +YS + TVPVLWDKK TIV+N
Sbjct: 91 MLENGWTF---DDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSN 147
Query: 61 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPY 120
ESAEIIRMFNT F+ + A D +P + +ID N WIY+ +NNGVY+ GFAT Q Y
Sbjct: 148 ESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAY 206
Query: 121 DE 122
DE
Sbjct: 207 DE 208
>sp|O94524|GTO2_SCHPO Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=gto2 PE=3 SV=1
Length = 313
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
Query: 5 GWVFPATDTEEPGAEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAE 64
GW F +E + DPL + + LY A NY+ +FTVPVLWD K TIVNNESAE
Sbjct: 81 GWNF----DKENDSTGDPLYNSPYLRNLYFRADPNYNMRFTVPVLWDSKYNTIVNNESAE 136
Query: 65 IIRMFNTEFNDIAENAS---LDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYD 121
IIRMFN FN++ E+ +DL+PS R +ID N++ Y+ +NNGVY+ GFAT Y+
Sbjct: 137 IIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDELNDYFYDTVNNGVYKTGFATTAEAYE 196
Query: 122 E 122
+
Sbjct: 197 K 197
>sp|P36156|GTO2_YEAST Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ECM4 PE=1 SV=1
Length = 370
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 18 AEPDPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNT----EF 73
A +P G K I LY + YS +FTVPVLWD + +TIVNNES+EIIR+ N+ EF
Sbjct: 130 ATNEPHYGYKRISDLYYKSDPQYSARFTVPVLWDLETQTIVNNESSEIIRILNSSAFDEF 189
Query: 74 NDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYD 121
D ++ DL P+ + QID N W+Y+ INNGVY+ GFA K Y+
Sbjct: 190 VD-DDHKKTDLVPAQLKTQIDDFNSWVYDSINNGVYKTGFAEKAEVYE 236
>sp|P48239|GTO1_YEAST Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GTO1 PE=1 SV=1
Length = 356
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 21 DPLNGAKTIGGLYELASTNY-SRKFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFND 75
DP+ + LY L Y KFTVPVLWD K + IVNNES +IIR+ N+ EF
Sbjct: 115 DPVENISRLSELYYLNDPKYPGTKFTVPVLWDSKTRKIVNNESGDIIRILNSGVFDEFIQ 174
Query: 76 IAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYD 121
E +DL P D D+ID +W++ IN GVY+ G A Y+
Sbjct: 175 SEETNVIDLVPHDLIDEIDKNIKWVHPKINLGVYKVGLAENGKIYE 220
>sp|Q04806|GTO3_YEAST Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GTO3 PE=1 SV=1
Length = 366
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 21 DPLNGAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNT-EFNDIA-- 77
+P G K + Y +Y +FTVPVLWD + TIVNNES++II + N+ F++
Sbjct: 129 EPHYGYKRLSDFYFKTKPDYKGRFTVPVLWDLETCTIVNNESSDIIGIMNSAAFDEFVGE 188
Query: 78 ENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFA 114
E + L P QI N W+Y+ INNGVY+ GFA
Sbjct: 189 EYRQVRLVPRSLEAQITEFNSWVYDKINNGVYKAGFA 225
>sp|Q20806|YXWL_CAEEL UPF0392 protein F55C10.4 OS=Caenorhabditis elegans GN=F55C10.4 PE=3
SV=2
Length = 517
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 47 PVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQI 93
P+L ++LKTI NN + M+ TEFND+ + L+P+D Q+
Sbjct: 362 PIL--RELKTISNNGMFHLKNMYLTEFNDLG-IGQIPLNPTDNVTQL 405
>sp|Q82081|POLG_HRV3 Genome polyprotein (Fragment) OS=Human rhinovirus 3 PE=1 SV=3
Length = 855
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 61 ESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGI 104
+ +I M NT ND N + LH Q +QI GT +I +G+
Sbjct: 379 QVGTLIPMNNTGTNDNVTNYLIPLHADRQNEQIFGTKLYIGDGV 422
>sp|Q7TBL3|IBMP_CYLCV Transactivator/viroplasmin protein OS=Cestrum yellow leaf curling
virus GN=ORF VI PE=3 SV=1
Length = 531
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 49 LWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNE 98
L D+ +K + + ++ MFN +F AE LD+ D I+G E
Sbjct: 377 LLDETMKIRIPAINVAVMAMFNKQFEPFAEEIKLDIQLEDVLASIEGVYE 426
>sp|B6IVA4|DNAK_RHOCS Chaperone protein DnaK OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=dnaK PE=3 SV=1
Length = 640
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 22 PLN-GAKTIGGLYELASTNYSRKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENA 80
PL+ G +T+GG++ + R T+P + T +N++A IR+F E A+N
Sbjct: 391 PLSLGIETLGGVF---TRLIDRNTTIPTKKSQVFSTAEDNQTAVTIRVFQGEREMAADNK 447
Query: 81 SL---DLH--PSDQRD--QIDGTNEWIYNGINN 106
L DL PS R QI+ T + NGI N
Sbjct: 448 MLGQFDLMGIPSAPRGVPQIEVTFDIDANGIVN 480
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,156,671
Number of Sequences: 539616
Number of extensions: 1914701
Number of successful extensions: 3447
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3435
Number of HSP's gapped (non-prelim): 28
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)