Query 036837
Match_columns 122
No_of_seqs 124 out of 1327
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 09:40:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036837.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036837hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 99.9 8.1E-22 2.8E-26 134.4 8.1 115 6-120 9-173 (485)
2 3tbg_A Cytochrome P450 2D6; mo 99.9 6.9E-21 2.4E-25 129.5 12.4 115 7-121 6-176 (479)
3 3pm0_A Cypib1, cytochrome P450 99.9 6.1E-21 2.1E-25 130.6 11.1 114 7-120 5-176 (507)
4 3e6i_A CYPIIE1, P450-J, cytoch 99.8 3.3E-20 1.1E-24 126.1 13.1 113 6-120 5-170 (476)
5 3swz_A Steroid 17-alpha-hydrox 99.8 4.3E-20 1.5E-24 126.3 12.9 111 8-120 5-172 (494)
6 3k9v_A 1,25-dihydroxyvitamin D 99.8 3.9E-20 1.3E-24 125.9 9.8 114 6-119 19-193 (482)
7 1po5_A Cytochrome P450 2B4; ox 99.8 1.4E-18 4.7E-23 118.5 13.4 109 10-120 9-171 (476)
8 3s79_A Cytochrome P450 19A1; o 99.8 1.2E-19 4.1E-24 124.2 8.1 114 6-119 40-209 (503)
9 1r9o_A Cytochrome P450 2C9; mo 99.8 1E-18 3.6E-23 119.1 11.2 111 8-120 8-172 (477)
10 3ld6_A Lanosterol 14-alpha dem 99.8 1.9E-19 6.6E-24 122.3 7.1 118 2-119 2-168 (461)
11 2fdv_A Cytochrome P450 2A6; CY 99.8 2.9E-18 1E-22 116.9 12.9 109 10-120 9-171 (476)
12 2hi4_A Cytochrome P450 1A2; CY 99.8 8.5E-18 2.9E-22 115.2 10.7 112 9-120 12-187 (495)
13 3czh_A Cytochrome P450 2R1; vi 99.7 6.4E-18 2.2E-22 115.4 9.3 111 7-119 8-175 (481)
14 3i3k_A Lanosterol 14-alpha dem 99.7 4.1E-18 1.4E-22 115.6 7.0 118 2-119 2-168 (461)
15 2ij2_A Cytochrome P450 BM3; mo 99.7 5.1E-17 1.8E-21 110.8 11.9 109 11-120 3-164 (470)
16 3n9y_A Cholesterol SIDE-chain 99.7 1.7E-17 5.7E-22 113.2 9.0 115 5-120 3-181 (487)
17 3gw9_A Sterol 14alpha-demethyl 99.7 1.3E-18 4.4E-23 117.6 3.5 107 10-119 2-162 (450)
18 2ve3_A Putative cytochrome P45 99.7 5.9E-17 2E-21 109.7 8.6 106 5-115 6-161 (444)
19 3v8d_A Cholesterol 7-alpha-mon 99.7 1.6E-16 5.3E-21 108.7 9.6 114 6-119 8-176 (491)
20 2cib_A Cytochrome P450 51; hem 99.7 1.7E-16 5.8E-21 107.8 9.2 110 11-120 4-159 (455)
21 3dbg_A Putative cytochrome P45 99.6 5E-16 1.7E-20 105.7 7.9 105 10-119 22-176 (467)
22 3b6h_A Prostacyclin synthase; 99.6 1.1E-15 3.8E-20 104.6 9.1 115 6-120 13-177 (498)
23 3qz1_A Steroid 21-hydroxylase; 99.6 5.2E-16 1.8E-20 106.1 6.7 103 6-116 24-180 (496)
24 3dax_A Cytochrome P450 7A1; ch 99.6 1.6E-15 5.4E-20 103.6 8.4 112 9-120 11-177 (491)
25 3dsk_A Cytochrome P450 74A, ch 99.6 1E-15 3.4E-20 104.8 3.0 114 7-120 24-205 (495)
26 3mdm_A Cholesterol 24-hydroxyl 99.6 1E-13 3.5E-18 93.9 12.3 91 30-120 10-155 (456)
27 2cd8_A Cytochrome P450 monooxy 99.5 1.2E-14 4E-19 98.5 6.7 109 7-119 22-186 (436)
28 3b98_A Prostaglandin I2 syntha 99.5 6.8E-15 2.3E-19 100.1 5.0 111 7-117 14-174 (475)
29 1jfb_A Nitric-oxide reductase 99.5 2.4E-13 8.3E-18 91.1 10.1 104 12-119 2-163 (404)
30 1n97_A CYP175A1; electron tran 99.5 1.1E-14 3.8E-19 97.2 3.3 102 16-119 4-150 (389)
31 1izo_A P450bsbeta, cytochrome 99.4 2.6E-13 9E-18 91.2 6.7 98 18-120 7-156 (417)
32 3awm_A Fatty acid alpha-hydrox 99.4 8.9E-13 3E-17 88.6 6.6 99 13-120 4-155 (415)
33 3dan_A Cytochrome P450 74A2; A 99.4 1.6E-13 5.3E-18 93.3 2.9 114 7-120 5-187 (473)
34 1ued_A P450 OXYC, P450 monooxy 99.3 9.6E-12 3.3E-16 83.5 8.1 100 9-118 8-169 (406)
35 2zbx_A Cytochrome P450-SU1; be 99.2 6E-11 2.1E-15 79.8 9.7 105 10-119 4-168 (412)
36 2zwu_A Camphor 5-monooxygenase 99.1 2.6E-10 8.9E-15 76.9 8.8 110 2-119 2-173 (415)
37 1s1f_A Putative cytochrome P45 99.1 1.1E-09 3.6E-14 73.6 8.6 102 10-119 7-166 (406)
38 3abb_A CYP105D6, cytochrome P4 99.1 1.4E-09 4.7E-14 73.1 9.2 88 27-119 21-167 (408)
39 1odo_A Putative cytochrome P45 99.0 1.8E-09 6.3E-14 72.5 9.7 90 27-119 12-162 (408)
40 3oo3_A OXY protein; cytochrome 99.0 8.5E-10 2.9E-14 73.5 7.5 88 29-120 11-153 (384)
41 3ivy_A Cytochrome P450 CYP125; 99.0 2E-09 6.9E-14 72.9 9.3 102 11-118 18-187 (433)
42 3aba_A Cytochrome P450; oxidor 99.0 3.3E-09 1.1E-13 71.1 9.2 87 28-119 17-160 (403)
43 2jjn_A Cytochrome P450 113A1; 98.9 5.1E-09 1.7E-13 70.4 7.8 99 5-120 13-158 (411)
44 3tyw_A Putative cytochrome P45 98.9 3E-08 1E-12 66.8 10.8 88 28-120 27-173 (417)
45 2wm5_A CYP124, putative cytoch 98.9 2.1E-08 7.3E-13 68.0 9.6 87 30-119 44-192 (435)
46 1gwi_A CYP154C1, cytochrome P4 98.8 1.3E-08 4.4E-13 68.5 7.8 43 27-70 14-57 (411)
47 2y5n_A MYCG, P-450-like protei 98.8 1.6E-08 5.5E-13 68.2 7.9 86 28-119 35-176 (417)
48 3ejb_B Biotin biosynthesis cyt 98.8 7.6E-08 2.6E-12 64.4 11.1 88 30-119 13-152 (404)
49 4fb2_A P450CIN; heme, monooxyg 98.7 3.1E-08 1.1E-12 66.3 6.7 90 28-119 17-156 (398)
50 1cpt_A Cytochrome P450-TERP; o 98.7 3.1E-08 1.1E-12 66.9 6.0 57 9-71 4-66 (428)
51 2xbk_A PIMD protein; epoxidati 98.7 3.1E-07 1.1E-11 61.7 9.9 42 29-71 25-67 (404)
52 2dkk_A Cytochrome P450; CYP158 98.6 1.6E-07 5.5E-12 63.2 8.1 85 30-119 27-169 (411)
53 3a4g_A Vitamin D hydroxylase; 98.6 3.5E-07 1.2E-11 61.5 9.5 43 28-71 18-60 (411)
54 1z8o_A 6-deoxyerythronolide B 98.6 1.5E-06 5.1E-11 58.3 11.8 42 29-71 13-54 (404)
55 3tkt_A Cytochrome P450; aromat 98.6 2.6E-07 8.8E-12 62.9 8.0 83 32-119 47-197 (450)
56 2z36_A MOXA, cytochrome P450 t 98.6 6.1E-07 2.1E-11 60.4 9.2 43 28-71 20-63 (413)
57 2xkr_A CYP142, putative cytoch 98.5 4.3E-07 1.5E-11 60.7 7.7 82 29-119 17-147 (398)
58 3buj_A CALO2; heme, iron, meta 98.5 7.4E-07 2.5E-11 59.6 8.2 81 30-119 13-151 (397)
59 1n40_A P450 MT2, cytochrome P4 98.5 1.6E-06 5.4E-11 58.0 9.5 87 28-119 14-155 (396)
60 2z3t_A Cytochrome P450; monoxy 98.4 1.8E-06 6.2E-11 58.3 9.0 40 30-70 20-61 (425)
61 3oft_A Cytochrome P450, CYP101 98.4 1.8E-06 6E-11 57.7 8.5 42 28-71 22-63 (396)
62 3r9b_A Cytochrome P450 164A2; 98.4 2.7E-06 9.3E-11 57.2 9.0 86 29-120 28-169 (418)
63 3lxh_A Cytochrome P450; heme, 98.4 2.5E-06 8.7E-11 57.5 8.9 41 30-71 38-79 (421)
64 3nc3_A Cytochrome P450 CYPX; c 98.4 1.1E-06 3.8E-11 59.6 6.6 86 30-119 53-185 (441)
65 3mgx_A Putative P450 monooxyge 98.3 1.3E-06 4.5E-11 58.9 6.5 88 30-119 37-178 (415)
66 2uuq_A CYP130, cytochrome P450 98.3 3.4E-06 1.2E-10 56.8 8.4 82 30-119 25-168 (414)
67 1q5d_A P450 epoxidase; cytochr 98.3 2.2E-06 7.7E-11 57.7 7.1 40 28-70 24-63 (419)
68 1lfk_A OXYB, P450 monooxygenas 98.1 8.7E-06 3E-10 54.5 7.0 78 37-119 20-161 (398)
69 3rwl_A Cytochrome P450 alkane 98.1 6.5E-05 2.2E-09 50.8 11.1 41 30-71 38-79 (426)
70 2rfb_A Cytochrome P450; heme, 98.0 5.2E-06 1.8E-10 54.5 4.1 25 94-119 91-116 (343)
71 2wiy_A XPLA-heme, cytochrome P 98.0 6.6E-05 2.3E-09 50.2 9.0 86 30-119 20-151 (394)
72 3p3o_A Cytochrome P450; monoox 97.8 3.8E-05 1.3E-09 51.7 5.4 40 29-71 32-71 (416)
73 1io7_A Cytochrome P450 CYP119; 97.7 0.00031 1E-08 46.5 8.8 34 33-71 2-35 (368)
74 4dnj_A Putative cytochrome P45 97.3 0.00036 1.2E-08 47.0 4.8 52 17-71 18-72 (412)
75 3b4x_A 367AA long hypothetical 95.8 0.01 3.5E-07 39.2 4.0 34 33-71 2-35 (367)
76 2yjn_B Erycii, DTDP-4-keto-6-d 95.2 0.0027 9.3E-08 42.5 -0.4 54 13-71 36-95 (381)
77 4dxy_A Cytochrome P450, CYP101 95.1 0.2 6.8E-06 33.8 8.5 41 30-71 37-78 (417)
78 3b4x_A 367AA long hypothetical 87.1 0.55 1.9E-05 30.9 3.2 37 74-117 97-134 (367)
79 2diu_A KIAA0430 protein; struc 83.9 3.2 0.00011 22.2 4.6 50 20-70 12-64 (96)
80 3lqv_A PRE-mRNA branch site pr 79.4 5.4 0.00018 21.3 7.6 58 12-71 3-66 (115)
81 3d2w_A TAR DNA-binding protein 71.3 8.5 0.00029 19.6 6.4 52 14-67 8-63 (89)
82 2krb_A Eukaryotic translation 69.2 8.7 0.0003 19.0 7.4 49 21-69 5-64 (81)
83 1whv_A Poly(A)-specific ribonu 66.3 10 0.00036 20.3 3.6 39 33-71 29-68 (100)
84 2kxn_B Transformer-2 protein h 58.7 21 0.00071 19.6 8.8 53 16-70 45-106 (129)
85 2nlw_A Eukaryotic translation 51.7 24 0.00084 18.4 7.7 52 18-69 16-78 (105)
86 1nu4_A U1A RNA binding domain; 51.2 23 0.00079 17.9 5.6 52 18-69 9-68 (97)
87 2pe8_A Splicing factor 45; RRM 50.9 26 0.0009 18.5 5.6 57 14-70 5-74 (105)
88 3beg_B Splicing factor, argini 50.7 27 0.00093 18.6 6.3 50 19-70 18-69 (115)
89 1x4e_A RNA binding motif, sing 49.8 23 0.00078 17.4 5.7 52 16-69 4-64 (85)
90 2cqc_A Arginine/serine-rich sp 49.3 25 0.00084 17.7 7.1 53 15-69 13-74 (95)
91 1sjq_A Polypyrimidine tract-bi 46.2 33 0.0011 18.3 7.0 52 16-69 15-69 (105)
92 2ad9_A Polypyrimidine tract-bi 44.8 38 0.0013 18.6 6.9 52 16-69 30-84 (119)
93 2d9p_A Polyadenylate-binding p 43.7 33 0.0011 17.6 6.5 52 16-69 14-72 (103)
94 1x4c_A Splicing factor, argini 43.7 35 0.0012 17.8 7.5 50 19-70 17-68 (108)
95 1x4d_A Matrin 3; structural ge 43.6 36 0.0012 18.0 6.9 55 14-69 12-69 (102)
96 3s6e_A RNA-binding protein 39; 43.5 38 0.0013 18.3 5.4 59 13-71 3-74 (114)
97 3ctr_A Poly(A)-specific ribonu 43.4 8.8 0.0003 20.7 1.0 39 33-71 19-58 (101)
98 2a3j_A U1 small nuclear ribonu 42.7 42 0.0014 18.5 6.2 52 19-70 31-90 (127)
99 1s79_A Lupus LA protein; RRM, 42.3 37 0.0013 17.8 6.4 49 19-69 13-69 (103)
100 3s8s_A Histone-lysine N-methyl 40.0 42 0.0014 17.8 6.2 52 18-71 7-67 (110)
101 1x5p_A Negative elongation fac 39.8 38 0.0013 17.2 7.6 50 16-69 14-66 (97)
102 2dnz_A Probable RNA-binding pr 39.7 37 0.0013 17.0 7.4 52 17-70 5-65 (95)
103 2bz2_A Negative elongation fac 37.7 49 0.0017 17.8 5.2 47 19-69 41-90 (121)
104 3trk_A Nonstructural polyprote 37.5 18 0.0006 23.5 1.8 19 102-120 47-65 (324)
105 4f02_A Polyadenylate-binding p 37.1 66 0.0022 19.1 6.2 54 16-71 14-76 (213)
106 2dhg_A TRNA selenocysteine ass 37.0 44 0.0015 17.1 7.8 53 15-69 7-68 (104)
107 1whx_A Hypothetical protein ri 36.7 48 0.0017 17.4 7.0 49 20-70 13-64 (111)
108 4f25_A Polyadenylate-binding p 35.5 51 0.0018 17.4 6.3 50 20-71 8-64 (115)
109 2jvr_A Nucleolar protein 3; RN 35.1 54 0.0018 17.5 6.5 50 19-70 30-85 (111)
110 3bs9_A Nucleolysin TIA-1 isofo 34.7 44 0.0015 16.3 5.9 49 19-69 8-65 (87)
111 2hvz_A Splicing factor, argini 34.3 49 0.0017 16.8 6.4 47 21-69 4-54 (101)
112 3zzy_A Polypyrimidine tract-bi 34.1 63 0.0022 18.0 6.1 47 21-69 32-83 (130)
113 1p27_B RNA-binding protein 8A; 34.1 51 0.0017 16.9 6.4 48 20-69 26-82 (106)
114 1iqt_A AUF1, heterogeneous nuc 33.8 42 0.0014 15.8 4.8 37 33-69 13-58 (75)
115 2dgu_A Heterogeneous nuclear r 33.5 52 0.0018 16.9 6.9 51 18-70 12-63 (103)
116 1oo0_B CG8781-PA, drosophila Y 32.9 55 0.0019 16.9 7.7 49 20-70 29-86 (110)
117 2dnp_A RNA-binding protein 14; 32.9 49 0.0017 16.4 8.3 52 16-69 8-60 (90)
118 2dgv_A HnRNP M, heterogeneous 32.8 49 0.0017 16.4 6.5 49 19-69 10-65 (92)
119 1x4f_A Matrin 3; structural ge 32.4 62 0.0021 17.4 4.8 53 16-69 24-79 (112)
120 4fxv_A ELAV-like protein 1; RN 32.0 56 0.0019 16.8 6.2 48 20-69 22-78 (99)
121 2cq1_A PTB-like protein L; RRM 31.7 59 0.002 17.0 6.7 52 16-69 14-68 (101)
122 2e5h_A Zinc finger CCHC-type a 31.6 53 0.0018 16.3 7.8 51 17-69 16-75 (94)
123 1sjr_A Polypyrimidine tract-bi 31.5 81 0.0028 18.5 7.2 49 21-71 50-103 (164)
124 3v4m_A Splicing factor U2AF 65 31.1 62 0.0021 17.0 6.1 54 17-70 5-77 (105)
125 2hwk_A Helicase NSP2; rossman 30.5 26 0.00089 22.9 1.8 20 101-120 44-63 (320)
126 2adc_A Polypyrimidine tract-bi 30.3 91 0.0031 18.7 7.4 52 19-71 36-91 (229)
127 2xnq_A Nuclear polyadenylated 30.2 60 0.002 16.5 7.6 51 19-70 24-75 (97)
128 3ex7_B RNA-binding protein 8A; 30.1 67 0.0023 17.1 7.4 50 19-70 24-82 (126)
129 3ue2_A Poly(U)-binding-splicin 29.9 71 0.0024 17.3 6.1 55 16-70 19-89 (118)
130 1whw_A Hypothetical protein ri 29.8 59 0.002 16.4 7.2 49 19-69 10-67 (99)
131 2x1f_A MRNA 3'-END-processing 29.8 59 0.002 16.3 7.3 49 20-70 5-62 (96)
132 2fy1_A RNA-binding motif prote 29.6 68 0.0023 17.0 6.0 50 19-70 9-66 (116)
133 2cq3_A RNA-binding protein 9; 29.6 61 0.0021 16.5 8.5 50 18-69 16-72 (103)
134 3pgw_S U1-70K; protein-RNA com 29.5 1.4E+02 0.0047 20.4 7.8 51 18-70 103-162 (437)
135 2dgt_A RNA-binding protein 30; 29.5 58 0.002 16.2 7.4 50 18-69 11-61 (92)
136 2ywk_A Putative RNA-binding pr 29.1 59 0.002 16.2 5.6 50 18-69 17-74 (95)
137 1wf0_A TDP-43, TAR DNA-binding 28.9 58 0.002 16.0 4.0 47 19-67 7-57 (88)
138 2dnq_A RNA-binding protein 4B; 28.9 59 0.002 16.1 7.2 50 18-69 9-59 (90)
139 1rk8_A CG8781-PA, CG8781-PA pr 28.2 86 0.003 17.8 6.6 49 20-70 75-132 (165)
140 2jrs_A RNA-binding protein 39; 28.1 70 0.0024 16.7 6.3 49 19-69 28-85 (108)
141 2dnm_A SRP46 splicing factor; 28.0 66 0.0023 16.4 6.7 50 18-69 14-72 (103)
142 2cq4_A RNA binding motif prote 28.0 71 0.0024 16.7 5.1 48 20-69 28-84 (114)
143 1p1t_A Cleavage stimulation fa 28.0 66 0.0023 16.3 5.4 51 19-71 10-69 (104)
144 3mdf_A Peptidyl-prolyl CIS-tra 27.8 59 0.002 15.7 7.9 51 17-69 7-66 (85)
145 2d9o_A DNAJ (HSP40) homolog, s 26.3 77 0.0026 16.6 5.9 37 33-69 31-71 (100)
146 2dnh_A Bruno-like 5, RNA bindi 26.0 74 0.0025 16.2 7.4 50 18-69 16-73 (105)
147 2do4_A Squamous cell carcinoma 25.9 72 0.0025 16.1 8.1 50 18-69 18-75 (100)
148 3md1_A Nuclear and cytoplasmic 25.6 65 0.0022 15.5 6.0 47 21-69 5-60 (83)
149 3fgx_A Rbstp2171; structural g 24.9 52 0.0018 18.1 2.1 17 35-51 9-25 (114)
150 2cqb_A Peptidyl-prolyl CIS-tra 24.9 77 0.0026 16.0 6.5 51 17-69 12-71 (102)
151 3ns6_A Eukaryotic translation 24.8 78 0.0027 16.1 6.1 51 19-69 8-71 (100)
152 2la6_A RNA-binding protein FUS 24.8 76 0.0026 16.0 6.6 50 18-69 14-80 (99)
153 1x5u_A Splicing factor 3B subu 24.4 80 0.0027 16.1 8.1 51 18-70 16-75 (105)
154 1x4h_A RNA-binding protein 28; 24.2 82 0.0028 16.2 8.9 51 17-69 15-74 (111)
155 2dnr_A Synaptojanin-1; RRM dom 24.2 87 0.003 16.4 4.7 38 31-68 27-65 (91)
156 3ulh_A THO complex subunit 4; 24.0 82 0.0028 16.1 6.6 49 19-69 31-87 (107)
157 2kvi_A Nuclear polyadenylated 24.0 79 0.0027 15.9 5.4 51 19-70 12-63 (96)
158 2l82_A Designed protein OR32; 23.7 89 0.003 17.1 2.9 16 56-71 6-21 (162)
159 3tyt_A Heterogeneous nuclear r 23.7 1.2E+02 0.0042 18.0 5.5 53 18-71 5-61 (205)
160 2ku7_A MLL1 PHD3-CYP33 RRM chi 23.5 96 0.0033 16.7 8.5 49 20-70 66-123 (140)
161 2mss_A Protein (musashi1); RNA 23.2 70 0.0024 15.0 5.6 46 22-69 4-58 (75)
162 2err_A Ataxin-2-binding protei 23.1 90 0.0031 16.2 5.7 48 20-69 32-86 (109)
163 2cpi_A CCR4-NOT transcription 22.7 92 0.0032 16.2 3.2 51 17-69 15-80 (111)
164 2cq2_A Hypothetical protein LO 22.7 1E+02 0.0035 16.7 5.5 52 16-69 24-80 (114)
165 2cpf_A RNA binding motif prote 22.6 85 0.0029 15.7 6.9 51 18-70 6-68 (98)
166 2dgp_A Bruno-like 4, RNA bindi 22.3 90 0.0031 15.9 8.0 50 18-69 14-72 (106)
167 2qfj_A FBP-interacting repress 22.2 1.3E+02 0.0043 17.5 7.3 49 21-71 32-89 (216)
168 1wex_A Hypothetical protein (r 21.9 98 0.0033 16.2 7.7 51 17-69 15-68 (104)
169 3r27_A HnRNP L, heterogeneous 21.8 1E+02 0.0034 16.3 7.8 52 16-69 20-74 (100)
170 2wbr_A GW182, gawky, LD47780P; 21.4 99 0.0034 16.1 5.6 50 18-69 8-60 (89)
171 2jwn_A Embryonic polyadenylate 21.4 1E+02 0.0035 16.3 4.7 47 21-69 40-95 (124)
172 2cpj_A Non-POU domain-containi 21.4 92 0.0031 15.7 5.6 50 18-69 16-68 (99)
173 2plx_B Peptide inhibitor; heli 20.5 51 0.0017 12.4 2.0 10 60-69 12-21 (26)
174 1wi8_A EIF-4B, eukaryotic tran 20.4 1E+02 0.0034 15.7 6.5 51 16-69 14-74 (104)
175 2dit_A HIV TAT specific factor 20.4 1.1E+02 0.0036 16.0 5.9 56 14-69 12-81 (112)
176 2div_A TRNA selenocysteine ass 20.3 97 0.0033 15.5 6.6 52 16-69 8-69 (99)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.86 E-value=8.1e-22 Score=134.40 Aligned_cols=115 Identities=20% Similarity=0.259 Sum_probs=98.4
Q ss_pred CCCCCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------
Q 036837 6 RLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------- 71 (122)
.++.++.+|||+++|++||++.+..+++..+.+|+++||+++++++++.+.|+++||+++++|+.+
T Consensus 9 ~~~k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~ 88 (485)
T 3nxu_A 9 GLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP 88 (485)
T ss_dssp THHHHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred hHHhhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence 344456799999999999999887788889999999999999999999999999999999999954
Q ss_pred ------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhc
Q 036837 72 ------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 115 (122)
Q Consensus 72 ------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG 115 (122)
+.+.++++++++.+.+.+..++++|+.+++..+++|+|+.++||
T Consensus 89 ~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG 168 (485)
T 3nxu_A 89 VGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG 168 (485)
T ss_dssp CGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred ccccccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcC
Confidence 34455667777777654445678999999999999999999999
Q ss_pred CCCCC
Q 036837 116 NNLVD 120 (122)
Q Consensus 116 ~~~~~ 120 (122)
.+++.
T Consensus 169 ~~~~~ 173 (485)
T 3nxu_A 169 VNIDS 173 (485)
T ss_dssp CCCCG
T ss_pred Ccccc
Confidence 98864
No 2
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.86 E-value=6.9e-21 Score=129.48 Aligned_cols=115 Identities=17% Similarity=0.227 Sum_probs=88.4
Q ss_pred CCCCCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------
Q 036837 7 LGGRQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------- 71 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------- 71 (122)
.+..++||||+++|++||++.+ ..+.+..+.+|+++||+||++++|+.++|+|+||+++++||.+
T Consensus 6 ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~ 85 (479)
T 3tbg_A 6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85 (479)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG
T ss_pred CCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHH
Confidence 3444799999999999999887 4678889999999999999999999999999999999999954
Q ss_pred ------------------------------HH---------hHHHHHHHHHHHHHh--CCCCceeeHHHHHHHHHHHHHH
Q 036837 72 ------------------------------YL---------RRKKINDLLGYVEEN--CPAGKAIGFGQAAFHTSLNLSS 110 (122)
Q Consensus 72 ------------------------------~~---------~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~ii~ 110 (122)
.+ .+..+......+... ...++.+|+.+++..+++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (479)
T 3tbg_A 86 QILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIA 165 (479)
T ss_dssp GGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHH
T ss_pred HHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHH
Confidence 00 011112222222211 2345689999999999999999
Q ss_pred HHHhcCCCCCC
Q 036837 111 NTIFSNNLVDP 121 (122)
Q Consensus 111 ~~~fG~~~~~~ 121 (122)
.++||.+++..
T Consensus 166 ~~~fg~~~~~~ 176 (479)
T 3tbg_A 166 SLTCGRRFEYD 176 (479)
T ss_dssp HHHHSCCCCTT
T ss_pred HhhcCCccccc
Confidence 99999988753
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.85 E-value=6.1e-21 Score=130.61 Aligned_cols=114 Identities=21% Similarity=0.316 Sum_probs=76.5
Q ss_pred CCCCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------------
Q 036837 7 LGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------------- 71 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------------- 71 (122)
..+.+.||||+++|++||+..+..+++..+.+|+++||+++++++++.+.++++||+++++|+.+
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred cCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 34567899999999999999888889999999999999999999999999999999999999954
Q ss_pred -------------------------H------------------HhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHH
Q 036837 72 -------------------------Y------------------LRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNL 108 (122)
Q Consensus 72 -------------------------~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 108 (122)
+ .+.++++++++.+.+...+++++|+.+++..+++|+
T Consensus 85 ~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv 164 (507)
T 3pm0_A 85 VVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANV 164 (507)
T ss_dssp HGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHHH
T ss_pred hhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHHH
Confidence 0 123445566666665444567899999999999999
Q ss_pred HHHHHhcCCCCC
Q 036837 109 SSNTIFSNNLVD 120 (122)
Q Consensus 109 i~~~~fG~~~~~ 120 (122)
++.++||.+++.
T Consensus 165 i~~~~fG~~~~~ 176 (507)
T 3pm0_A 165 MSAVCFGCRYSH 176 (507)
T ss_dssp HHHHHTSCCCCT
T ss_pred HHHHHccccCCC
Confidence 999999998864
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.85 E-value=3.3e-20 Score=126.11 Aligned_cols=113 Identities=21% Similarity=0.292 Sum_probs=91.2
Q ss_pred CCCCCCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 6 RLGGRQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
.+++.+.||||+++|++||++.+ ..+++..+.+|+++||+++++++++.+.++++||+++++|+.+
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~ 84 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPA 84 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGG
T ss_pred ccCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCch
Confidence 34556889999999999999988 5678899999999999999999999999999999999999976
Q ss_pred --------------------------H-------------HhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHH
Q 036837 72 --------------------------Y-------------LRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNT 112 (122)
Q Consensus 72 --------------------------~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~ 112 (122)
. .+.++++++++.+.+ ..++++|+.+++..+++|+|+.+
T Consensus 85 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi~~~ 162 (476)
T 3e6i_A 85 FHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRK--TQGQPFDPTFLIGCAPCNVIADI 162 (476)
T ss_dssp GGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHT--TTTSCBCTHHHHTHHHHHHHHHH
T ss_pred hheecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH--hCCCCcChHHHHHHHHHHHHHHH
Confidence 1 112334455555543 24678999999999999999999
Q ss_pred HhcCCCCC
Q 036837 113 IFSNNLVD 120 (122)
Q Consensus 113 ~fG~~~~~ 120 (122)
+||.+++.
T Consensus 163 ~fG~~~~~ 170 (476)
T 3e6i_A 163 LFRKHFDY 170 (476)
T ss_dssp HHSCCCCT
T ss_pred HcCCCCCC
Confidence 99998864
No 5
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.84 E-value=4.3e-20 Score=126.29 Aligned_cols=111 Identities=25% Similarity=0.351 Sum_probs=88.8
Q ss_pred CCCCCCCCCCCCceeeccCCCC--CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------
Q 036837 8 GGRQVRPGPKPYPVIGNLLEPG--GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------- 71 (122)
Q Consensus 8 ~~~~~~p~p~~~p~~g~~~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------- 71 (122)
...+.||||+++|++||++.+. ++++..+.+|.++||+++++++|+.+.|+++||+++++++.+
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 4467899999999999998874 357888999999999999999999999999999999999966
Q ss_pred -----------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHH
Q 036837 72 -----------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSS 110 (122)
Q Consensus 72 -----------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~ 110 (122)
+.+.++++.+++.+.+ ..++++|+...+..+++|+|+
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHHH
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHHH
Confidence 2334455666666654 246789999999999999999
Q ss_pred HHHhcCCCCC
Q 036837 111 NTIFSNNLVD 120 (122)
Q Consensus 111 ~~~fG~~~~~ 120 (122)
.++||.+++.
T Consensus 163 ~~~fG~~~~~ 172 (494)
T 3swz_A 163 LICFNTSYKN 172 (494)
T ss_dssp HHHHSCCCCT
T ss_pred HHHcCCcCCC
Confidence 9999998864
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.83 E-value=3.9e-20 Score=125.87 Aligned_cols=114 Identities=25% Similarity=0.395 Sum_probs=94.8
Q ss_pred CCCCCCCCCCCCCCceeeccCCC-----CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------
Q 036837 6 RLGGRQVRPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------- 71 (122)
..++.+.+|||+++|++||+..+ .++++..+.+++++||+++++++|+.+.|+++||+++++|+.+
T Consensus 19 ~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~r~~ 98 (482)
T 3k9v_A 19 ETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLE 98 (482)
T ss_dssp CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTCCSSCCCCC
T ss_pred ccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhcCCCCCCCC
Confidence 44566789999999999998765 2357888999999999999999999999999999999999864
Q ss_pred ----------------------------------------------HHhHHHHHHHHHHHHHhCC-CCceeeHHHHHHHH
Q 036837 72 ----------------------------------------------YLRRKKINDLLGYVEENCP-AGKAIGFGQAAFHT 104 (122)
Q Consensus 72 ----------------------------------------------~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 104 (122)
+.+.++++++++.+.+.+. .++++|+.+++..+
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~ 178 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKW 178 (482)
T ss_dssp CHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHH
T ss_pred chHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 2334556677777766543 46689999999999
Q ss_pred HHHHHHHHHhcCCCC
Q 036837 105 SLNLSSNTIFSNNLV 119 (122)
Q Consensus 105 ~~~ii~~~~fG~~~~ 119 (122)
++|+|+.++||.+++
T Consensus 179 t~dvi~~~~fG~~~~ 193 (482)
T 3k9v_A 179 SFESICLVLYEKRFG 193 (482)
T ss_dssp HHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHcccccC
Confidence 999999999999884
No 7
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.80 E-value=1.4e-18 Score=118.51 Aligned_cols=109 Identities=20% Similarity=0.322 Sum_probs=90.2
Q ss_pred CCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-----------------
Q 036837 10 RQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN----------------- 71 (122)
Q Consensus 10 ~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~----------------- 71 (122)
.+.||||+++|++|++..+ ..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 4688999999999999887 5778899999999999999999999999999999999999943
Q ss_pred ------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhc
Q 036837 72 ------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 115 (122)
Q Consensus 72 ------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG 115 (122)
+.+.++++++++.+.+. .++++|+.+.+..+++|+|+.++||
T Consensus 89 ~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~~fG 166 (476)
T 1po5_A 89 FQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSIVFG 166 (476)
T ss_dssp CSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHHHcC
Confidence 11223345555555442 3568999999999999999999999
Q ss_pred CCCCC
Q 036837 116 NNLVD 120 (122)
Q Consensus 116 ~~~~~ 120 (122)
.+++.
T Consensus 167 ~~~~~ 171 (476)
T 1po5_A 167 KRFDY 171 (476)
T ss_dssp SCCCT
T ss_pred CCCCC
Confidence 98763
No 8
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.80 E-value=1.2e-19 Score=124.17 Aligned_cols=114 Identities=18% Similarity=0.189 Sum_probs=86.7
Q ss_pred CCCCCCCCCCCCCCceeeccCCCC----CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH----------
Q 036837 6 RLGGRQVRPGPKPYPVIGNLLEPG----GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN---------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~~p~~g~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~---------- 71 (122)
.+++.+.||||+++|++||+..+. ...+..+.+|+++||+++++++|+.+.++++||+++++++.+
T Consensus 40 ~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~~~~~r~~~~ 119 (503)
T 3s79_A 40 NYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHNHYSSRFGSK 119 (503)
T ss_dssp -----CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSGGGCCCCCCH
T ss_pred HHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcCCCCCcchhh
Confidence 344567899999999999987763 234557889999999999999999999999999999999965
Q ss_pred ------------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHH
Q 036837 72 ------------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLS 109 (122)
Q Consensus 72 ------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii 109 (122)
+.+.++++++++.+.+....++++|+.+++..+++|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi 199 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS 199 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence 11122333333333333345678999999999999999
Q ss_pred HHHHhcCCCC
Q 036837 110 SNTIFSNNLV 119 (122)
Q Consensus 110 ~~~~fG~~~~ 119 (122)
+.++||.+++
T Consensus 200 ~~~~fG~~~~ 209 (503)
T 3s79_A 200 NTLFLRIPLD 209 (503)
T ss_dssp HHHHTCCCCC
T ss_pred HHHHcCcccC
Confidence 9999999875
No 9
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.79 E-value=1e-18 Score=119.07 Aligned_cols=111 Identities=26% Similarity=0.345 Sum_probs=85.0
Q ss_pred CCCCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------------
Q 036837 8 GGRQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------------- 71 (122)
Q Consensus 8 ~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------------- 71 (122)
+..+.||||+++|++|++..+ ..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 8 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~ 87 (477)
T 1r9o_A 8 GRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE 87 (477)
T ss_dssp -CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred CCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence 334689999999999999887 3567788999999999999999998899999999999999953
Q ss_pred --------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHH
Q 036837 72 --------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTI 113 (122)
Q Consensus 72 --------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 113 (122)
+.+.++++++++.+.+. .++++|+.+++..+++|+|+.++
T Consensus 88 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 88 RANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHHHH
T ss_pred hccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHH
Confidence 12233445555555432 35689999999999999999999
Q ss_pred hcCCCCC
Q 036837 114 FSNNLVD 120 (122)
Q Consensus 114 fG~~~~~ 120 (122)
||.+++.
T Consensus 166 fG~~~~~ 172 (477)
T 1r9o_A 166 FHKRFDY 172 (477)
T ss_dssp HSCCCCT
T ss_pred ccCcCCC
Confidence 9998753
No 10
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.79 E-value=1.9e-19 Score=122.31 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=87.0
Q ss_pred ccCCCCCCCCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------
Q 036837 2 ARSGRLGGRQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------- 71 (122)
Q Consensus 2 ~~~~~~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------- 71 (122)
.++......+.||+|++ +|++||++.+..+++.++.+++++|||||++++++.+.|+++||+++++++.+
T Consensus 2 a~~~lP~g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~ 81 (461)
T 3ld6_A 2 AKKTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAED 81 (461)
T ss_dssp --------CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHH
T ss_pred CCCCCccCCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCc
Confidence 34444445567888764 89999998887889999999999999999999999999999999999999965
Q ss_pred --------------------------------HHhHHHHHHHHHHHH-------HhCCCCceeeHHHHHHHHHHHHHHHH
Q 036837 72 --------------------------------YLRRKKINDLLGYVE-------ENCPAGKAIGFGQAAFHTSLNLSSNT 112 (122)
Q Consensus 72 --------------------------------~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~~~ii~~~ 112 (122)
.+....++.+...+. +....++.+|+.+.+..+++++++.+
T Consensus 82 ~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 161 (461)
T 3ld6_A 82 VYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHH
T ss_pred chhhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH
Confidence 111122222222222 22234568999999999999999999
Q ss_pred HhcCCCC
Q 036837 113 IFSNNLV 119 (122)
Q Consensus 113 ~fG~~~~ 119 (122)
+||.+++
T Consensus 162 ~fG~~~~ 168 (461)
T 3ld6_A 162 LHGKEIR 168 (461)
T ss_dssp HTCHHHH
T ss_pred HcCcchh
Confidence 9998764
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.79 E-value=2.9e-18 Score=116.90 Aligned_cols=109 Identities=22% Similarity=0.325 Sum_probs=89.5
Q ss_pred CCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-----------------
Q 036837 10 RQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN----------------- 71 (122)
Q Consensus 10 ~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~----------------- 71 (122)
.+.||||+++|++||+..+ ..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV 88 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHH
T ss_pred CCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhh
Confidence 4679999999999999887 4678889999999999999999999999999999999999943
Q ss_pred ------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhc
Q 036837 72 ------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFS 115 (122)
Q Consensus 72 ------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG 115 (122)
+.+.++++++++.+.+. .++++|+.+++..+++|+|+.++||
T Consensus 89 ~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~~fG 166 (476)
T 2fdv_A 89 FKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISSIVFG 166 (476)
T ss_dssp HTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHHHcC
Confidence 11123344555555432 3568999999999999999999999
Q ss_pred CCCCC
Q 036837 116 NNLVD 120 (122)
Q Consensus 116 ~~~~~ 120 (122)
.+++.
T Consensus 167 ~~~~~ 171 (476)
T 2fdv_A 167 DRFDY 171 (476)
T ss_dssp SCCCT
T ss_pred CcCCC
Confidence 98763
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.75 E-value=8.5e-18 Score=115.16 Aligned_cols=112 Identities=19% Similarity=0.357 Sum_probs=88.9
Q ss_pred CCCCC--CCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------------
Q 036837 9 GRQVR--PGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------------- 71 (122)
Q Consensus 9 ~~~~~--p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------------- 71 (122)
..++| |||+++|++|++..+..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 12 ~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~ 91 (495)
T 2hi4_A 12 PKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST 91 (495)
T ss_dssp CTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred CCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence 34444 9999999999987776778889999999999999999999999999999999999954
Q ss_pred ---------------------------HH----------------h----HHHHHHHHHHHHHhCCCCceeeHHHHHHHH
Q 036837 72 ---------------------------YL----------------R----RKKINDLLGYVEENCPAGKAIGFGQAAFHT 104 (122)
Q Consensus 72 ---------------------------~~----------------~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 104 (122)
.+ . .++++++++.+.+.+..++++|+.+++..+
T Consensus 92 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~ 171 (495)
T 2hi4_A 92 LITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVS 171 (495)
T ss_dssp TSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred HhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Confidence 10 1 112334444554432345689999999999
Q ss_pred HHHHHHHHHhcCCCCC
Q 036837 105 SLNLSSNTIFSNNLVD 120 (122)
Q Consensus 105 ~~~ii~~~~fG~~~~~ 120 (122)
++|+|+.++||.+++.
T Consensus 172 ~~dvi~~~~fG~~~~~ 187 (495)
T 2hi4_A 172 VANVIGAMCFGQHFPE 187 (495)
T ss_dssp HHHHHHHHHHGGGSCT
T ss_pred HHHHHHHHHcCCCCCC
Confidence 9999999999998753
No 13
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.75 E-value=6.4e-18 Score=115.44 Aligned_cols=111 Identities=24% Similarity=0.362 Sum_probs=86.7
Q ss_pred CCCCCCCCCCCCCceeeccCCCCCC---hHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------
Q 036837 7 LGGRQVRPGPKPYPVIGNLLEPGGK---PHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------ 71 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~~~~~~---~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------ 71 (122)
+.+.++||||+++|++|++..+... ++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 8 ~~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 8 RRPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp ----CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 3456789999999999998766322 7889999999999999999999999999999999999954
Q ss_pred ------------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHH
Q 036837 72 ------------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLS 109 (122)
Q Consensus 72 ------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii 109 (122)
+.+.++++++++.+.+ ..++++|+.+.+..+++|+|
T Consensus 88 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~~d~~~~~~~~~~~vi 165 (481)
T 3czh_A 88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIET--YKGRPFDFKQLITNAVSNIT 165 (481)
T ss_dssp HHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHT--TTTCCBCCHHHHHHHHHHHH
T ss_pred HHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH--cCCCCcCHHHHHHHHHHHHH
Confidence 1112233444444443 23567999999999999999
Q ss_pred HHHHhcCCCC
Q 036837 110 SNTIFSNNLV 119 (122)
Q Consensus 110 ~~~~fG~~~~ 119 (122)
+.++||.+++
T Consensus 166 ~~~~fG~~~~ 175 (481)
T 3czh_A 166 NLIIFGERFT 175 (481)
T ss_dssp HHHHHSSCCC
T ss_pred HHHHcCCCCC
Confidence 9999999875
No 14
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.74 E-value=4.1e-18 Score=115.65 Aligned_cols=118 Identities=15% Similarity=0.164 Sum_probs=87.2
Q ss_pred ccCCCCCCCCCCCC-CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH---------
Q 036837 2 ARSGRLGGRQVRPG-PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN--------- 71 (122)
Q Consensus 2 ~~~~~~~~~~~~p~-p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~--------- 71 (122)
.+.......+.||| |+++|++||+..+..+++.++.+++++||+++++++++.+.+++++|+++++++.+
T Consensus 2 ~~~~~~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~ 81 (461)
T 3i3k_A 2 AKKTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAED 81 (461)
T ss_dssp --------CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHH
T ss_pred CcccCCCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccch
Confidence 34455566789999 88999999998877788999999999999999999999999999999999999964
Q ss_pred --------------------------------HHhHHHHHHHHHHHHHh-------CCCCceeeHHHHHHHHHHHHHHHH
Q 036837 72 --------------------------------YLRRKKINDLLGYVEEN-------CPAGKAIGFGQAAFHTSLNLSSNT 112 (122)
Q Consensus 72 --------------------------------~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~ii~~~ 112 (122)
.+....++.+...+.++ ...++.+|+.+.+..+++++++.+
T Consensus 82 ~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~ 161 (461)
T 3i3k_A 82 VYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHH
Confidence 11112223333222221 133456899999999999999999
Q ss_pred HhcCCCC
Q 036837 113 IFSNNLV 119 (122)
Q Consensus 113 ~fG~~~~ 119 (122)
+||.++.
T Consensus 162 ~~G~~~~ 168 (461)
T 3i3k_A 162 LHGKEIR 168 (461)
T ss_dssp HTCHHHH
T ss_pred HccHhhh
Confidence 9997653
No 15
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.73 E-value=5.1e-17 Score=110.77 Aligned_cols=109 Identities=18% Similarity=0.154 Sum_probs=89.1
Q ss_pred CCCCCCCCCceeeccCCCC-CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------------
Q 036837 11 QVRPGPKPYPVIGNLLEPG-GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------ 71 (122)
Q Consensus 11 ~~~p~p~~~p~~g~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------ 71 (122)
+.+|||+++|++||+..+. .+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~~f~~~~~~~~~~~~~~~ 82 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA 82 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhcCcCcCchhHHHHHHHhc
Confidence 5689999999999998774 567888999999999999999999999999999999998743
Q ss_pred ----------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCC
Q 036837 72 ----------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNN 117 (122)
Q Consensus 72 ----------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~ 117 (122)
+.+.++++++++.+.+. ..++++|+.+.+..+++|+|+.++||.+
T Consensus 83 ~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~fG~~ 161 (470)
T 2ij2_A 83 GDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCGFNYR 161 (470)
T ss_dssp TTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHHcCCc
Confidence 23344455555555432 2356899999999999999999999998
Q ss_pred CCC
Q 036837 118 LVD 120 (122)
Q Consensus 118 ~~~ 120 (122)
+++
T Consensus 162 ~~~ 164 (470)
T 2ij2_A 162 FNS 164 (470)
T ss_dssp CCG
T ss_pred ccc
Confidence 753
No 16
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.73 E-value=1.7e-17 Score=113.21 Aligned_cols=115 Identities=18% Similarity=0.149 Sum_probs=89.8
Q ss_pred CCCCCCCCCCCCCCCceeeccCCC-----CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------
Q 036837 5 GRLGGRQVRPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------- 71 (122)
Q Consensus 5 ~~~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------- 71 (122)
+..++.+.+|||+..++. ++..+ ..+++..+.+++++||+|+++++|+.+.|+++||+++++|+.+
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~f~~r~ 81 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERF 81 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCCSSCCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCCCCCCCC
Confidence 345667789999877654 54433 1356788999999999999999999999999999999999954
Q ss_pred -----------------------------------------------HHhHHHHHHHHHHHHHhC----CCCceeeHHHH
Q 036837 72 -----------------------------------------------YLRRKKINDLLGYVEENC----PAGKAIGFGQA 100 (122)
Q Consensus 72 -----------------------------------------------~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~ 100 (122)
+.+.++++++++.+.+.. ..+.++|+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~ 161 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 161 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred CCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence 233455666676665532 23458999999
Q ss_pred HHHHHHHHHHHHHhcCCCCC
Q 036837 101 AFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 101 ~~~~~~~ii~~~~fG~~~~~ 120 (122)
+..+++|+|+.++||.+++.
T Consensus 162 ~~~~t~dvi~~~~fG~~~~~ 181 (487)
T 3n9y_A 162 LFRFAFESITNVIFGERQGM 181 (487)
T ss_dssp HHHHHHHHHHHHHHSSCCCT
T ss_pred HHHHHHHHHHHHHhcccccc
Confidence 99999999999999999864
No 17
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.73 E-value=1.3e-18 Score=117.55 Aligned_cols=107 Identities=12% Similarity=0.217 Sum_probs=86.3
Q ss_pred CCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcC-CeEEEecCCeeEEEecCHHHHHHHHHH----------------
Q 036837 10 RQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHG-RIMSLRLGLVTTVVVSSPSMAKAILKN---------------- 71 (122)
Q Consensus 10 ~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g-~i~~~~~~~~~~v~i~~p~~~~~il~~---------------- 71 (122)
.+.||||++ +|++||+..+..+++..+.+++++|| +++++++++.+.++++||+++++++.+
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467899664 99999998877788899999999999 999999999999999999999999965
Q ss_pred -----------------------------------HHhHHHHHHHHHHHHHhCC-CCceeeHHHHHHHHHHHHHHHHHhc
Q 036837 72 -----------------------------------YLRRKKINDLLGYVEENCP-AGKAIGFGQAAFHTSLNLSSNTIFS 115 (122)
Q Consensus 72 -----------------------------------~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ii~~~~fG 115 (122)
+.+.+++.++++. ... .++++|+.+++..+++|+++.++||
T Consensus 82 ~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~---~~~~~~~~vd~~~~~~~~~~~~i~~~~fG 158 (450)
T 3gw9_A 82 VFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAA---NWDKDEGEINLLEDCSTMIINTACQCLFG 158 (450)
T ss_dssp HHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHH---HSCSSEEEEEHHHHHHHHHHHHHHHHHSC
T ss_pred HhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HhccCCCcccHHHHHHHHHHHHHHHHHcC
Confidence 1222233333331 222 4568999999999999999999999
Q ss_pred CCCC
Q 036837 116 NNLV 119 (122)
Q Consensus 116 ~~~~ 119 (122)
.+++
T Consensus 159 ~~~~ 162 (450)
T 3gw9_A 159 EDLR 162 (450)
T ss_dssp HHHH
T ss_pred cchh
Confidence 8764
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.70 E-value=5.9e-17 Score=109.74 Aligned_cols=106 Identities=11% Similarity=0.101 Sum_probs=85.3
Q ss_pred CCCCCCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 5 GRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 5 ~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
...++.+.||||+++|++|++..+..++. .+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 6 ~~~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~ 84 (444)
T 2ve3_A 6 TNLNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLST 84 (444)
T ss_dssp ---CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHH
T ss_pred CCCCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHH
Confidence 34456678999999999999876644555 7789999999999999888889999999999999855
Q ss_pred -------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHh
Q 036837 72 -------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIF 114 (122)
Q Consensus 72 -------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~f 114 (122)
+.+.++++++++.+. .++++|+.+++..+++|+++.++|
T Consensus 85 ~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~~f 160 (444)
T 2ve3_A 85 RILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAATLFM 160 (444)
T ss_dssp HHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHHHc
Confidence 333445555665553 356899999999999999999999
Q ss_pred c
Q 036837 115 S 115 (122)
Q Consensus 115 G 115 (122)
|
T Consensus 161 G 161 (444)
T 2ve3_A 161 G 161 (444)
T ss_dssp C
T ss_pred C
Confidence 9
No 19
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.69 E-value=1.6e-16 Score=108.70 Aligned_cols=114 Identities=21% Similarity=0.246 Sum_probs=91.2
Q ss_pred CCCCCCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 6 RLGGRQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
.+...+.||||++ +|++||+..+..+++.++.+++++||+++++++++.+++++++|+++++++.+
T Consensus 8 ~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~ 87 (491)
T 3v8d_A 8 RRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFAL 87 (491)
T ss_dssp CCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHH
T ss_pred hccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHH
Confidence 3455678999998 69999999988899999999999999999999999999999999999999965
Q ss_pred ---------------------------HHhHHHHHHHHHHHHHh----CC----------CCceeeHHHHHHHHHHHHHH
Q 036837 72 ---------------------------YLRRKKINDLLGYVEEN----CP----------AGKAIGFGQAAFHTSLNLSS 110 (122)
Q Consensus 72 ---------------------------~~~~~~~~~~~~~l~~~----~~----------~~~~~~~~~~~~~~~~~ii~ 110 (122)
.+....++.+.+.+.++ .. .....++.+++..+++++++
T Consensus 88 ~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 167 (491)
T 3v8d_A 88 SAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGY 167 (491)
T ss_dssp HHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHH
T ss_pred HHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHH
Confidence 12223333333333222 11 24568999999999999999
Q ss_pred HHHhcCCCC
Q 036837 111 NTIFSNNLV 119 (122)
Q Consensus 111 ~~~fG~~~~ 119 (122)
.++||.+++
T Consensus 168 ~~~fG~~~~ 176 (491)
T 3v8d_A 168 LTIFGRDLT 176 (491)
T ss_dssp HHHHCBCCS
T ss_pred HHHcCcccc
Confidence 999999865
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.68 E-value=1.7e-16 Score=107.78 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=85.1
Q ss_pred CCCCC-CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------------
Q 036837 11 QVRPG-PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------ 71 (122)
Q Consensus 11 ~~~p~-p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------ 71 (122)
+.||+ |+++|++||+..+..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 67887 77899999998777788899999999999999999999999999999999999953
Q ss_pred --------------------HHhHHHHHHHHHHHH-------HhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCCC
Q 036837 72 --------------------YLRRKKINDLLGYVE-------ENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 --------------------~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
.+....++.+...+. +....++++|+.+++..+++|+++.++||.+++.
T Consensus 84 g~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~ 159 (455)
T 2cib_A 84 GEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRD 159 (455)
T ss_dssp C--------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHHHT
T ss_pred CCccccCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCCcch
Confidence 111112222222222 2223346799999999999999999999987653
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.64 E-value=5e-16 Score=105.67 Aligned_cols=105 Identities=17% Similarity=0.336 Sum_probs=86.2
Q ss_pred CCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------------
Q 036837 10 RQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------ 71 (122)
Q Consensus 10 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------ 71 (122)
+..||||+++|++||+..+..+++.++.++++ ||+|+++++++.+.++++||+++++|+.+
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~~~~~~~~~~~~~~~~~g 100 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLWESLEGLLG 100 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCTTC---------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCcCcccccchHHHHHHhcC
Confidence 44577899999999998877788889999887 99999999999999999999999999864
Q ss_pred --------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCC
Q 036837 72 --------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 --------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.++++++++.+ ..++++|+.+.+..+++++++.++||.+++
T Consensus 101 ~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l----~~~~~~d~~~~~~~~~~~vi~~~~~g~~~~ 176 (467)
T 3dbg_A 101 KEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERW----QPGKTVDATSESFRVAVRVAARCLLRGQYM 176 (467)
T ss_dssp ---------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHS----CTTSCEEHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred CCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHh----ccCCcCcHHHHHHHHHHHHHHHHHhCCccc
Confidence 22233333333333 346789999999999999999999999875
No 22
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.64 E-value=1.1e-15 Score=104.60 Aligned_cols=115 Identities=17% Similarity=0.216 Sum_probs=85.7
Q ss_pred CCCCCCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 6 RLGGRQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
.++..+.||||++ +|++||++.+..+++..+.+++++||++|++++++.++++++||+++++++.+
T Consensus 13 ~~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 92 (498)
T 3b6h_A 13 RTRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF 92 (498)
T ss_dssp CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred hccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence 3445678999987 89999988776678889999999999999999999999999999999999954
Q ss_pred ------------------------HHhHHHHH--------HHHHHHHHh----CCCCceeeHHHHHHHHHHHHHHHHHhc
Q 036837 72 ------------------------YLRRKKIN--------DLLGYVEEN----CPAGKAIGFGQAAFHTSLNLSSNTIFS 115 (122)
Q Consensus 72 ------------------------~~~~~~~~--------~~~~~l~~~----~~~~~~~~~~~~~~~~~~~ii~~~~fG 115 (122)
.+....++ .+...+.+. ......+++...+..+++++++.++||
T Consensus 93 ~~~~~~g~~~~~~~~~~~rr~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG 172 (498)
T 3b6h_A 93 LMERIFDVQLPHYSPSDEKARMKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYG 172 (498)
T ss_dssp HHHHTSCCCCTTCCHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCccccCHHHHHHHHHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhcC
Confidence 00011111 111122111 112235789999999999999999999
Q ss_pred CCCCC
Q 036837 116 NNLVD 120 (122)
Q Consensus 116 ~~~~~ 120 (122)
.+++.
T Consensus 173 ~~~~~ 177 (498)
T 3b6h_A 173 IEALP 177 (498)
T ss_dssp BSCSS
T ss_pred ccccc
Confidence 87643
No 23
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.63 E-value=5.2e-16 Score=106.07 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=82.7
Q ss_pred CCCCCCCCCCCCCCceeeccCCC-CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 6 RLGGRQVRPGPKPYPVIGNLLEP-GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 6 ~~~~~~~~p~p~~~p~~g~~~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
.+++.+.||||++ ++.+ .++++..+.+|+++||+++++++++.+.++++||+++++|+.+
T Consensus 24 ~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~ 97 (496)
T 3qz1_A 24 KLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS 97 (496)
T ss_dssp -----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred hccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence 3455678899886 3334 5788999999999999999999999999999999999999965
Q ss_pred ----------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHH
Q 036837 72 ----------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSN 111 (122)
Q Consensus 72 ----------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~ 111 (122)
+.+.++++++++.+.+ ..++++|+.+++..+++|+|+.
T Consensus 98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi~~ 175 (496)
T 3qz1_A 98 YKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSIICY 175 (496)
T ss_dssp TTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHTTT
T ss_pred HHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHHHH
Confidence 3345566667776665 3467899999999999999999
Q ss_pred HHhcC
Q 036837 112 TIFSN 116 (122)
Q Consensus 112 ~~fG~ 116 (122)
++||.
T Consensus 176 ~~fG~ 180 (496)
T 3qz1_A 176 LTFGN 180 (496)
T ss_dssp TSTTC
T ss_pred HhcCC
Confidence 99997
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.62 E-value=1.6e-15 Score=103.57 Aligned_cols=112 Identities=19% Similarity=0.223 Sum_probs=84.3
Q ss_pred CCCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH----------------
Q 036837 9 GRQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN---------------- 71 (122)
Q Consensus 9 ~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~---------------- 71 (122)
..+.||||++ +|++||++.+..+++..+.+++++||+++++++++.+.++++||+++++|+.+
T Consensus 11 ~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~~~ 90 (491)
T 3dax_A 11 QTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATSAK 90 (491)
T ss_dssp CTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHHHH
T ss_pred CCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHHHH
Confidence 3467888887 89999998887788899999999999999999999999999999999999853
Q ss_pred ------------------------HHhHHHHHHHHHHHH----Hh----CC------CCceeeHHHHHHHHHHHHHHHHH
Q 036837 72 ------------------------YLRRKKINDLLGYVE----EN----CP------AGKAIGFGQAAFHTSLNLSSNTI 113 (122)
Q Consensus 72 ------------------------~~~~~~~~~~~~~l~----~~----~~------~~~~~~~~~~~~~~~~~ii~~~~ 113 (122)
.+....++.+++.+. +. .. ....+++...+..+++++++.++
T Consensus 91 ~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 170 (491)
T 3dax_A 91 AFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTI 170 (491)
T ss_dssp HHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHHH
T ss_pred HcCCCcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHH
Confidence 111112222222221 11 10 11357899999999999999999
Q ss_pred hcCCCCC
Q 036837 114 FSNNLVD 120 (122)
Q Consensus 114 fG~~~~~ 120 (122)
||.+++.
T Consensus 171 fG~~~~~ 177 (491)
T 3dax_A 171 FGRDLTR 177 (491)
T ss_dssp HCBCSTT
T ss_pred cCccccc
Confidence 9987753
No 25
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.56 E-value=1e-15 Score=104.75 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=86.6
Q ss_pred CCCCCCCCCCCCCceeeccCCC-----CCChHHHHHHHHHhcCC-eEEEecCCeeE-------EEecCHHHHHHHH----
Q 036837 7 LGGRQVRPGPKPYPVIGNLLEP-----GGKPHKSLANLTKIHGR-IMSLRLGLVTT-------VVVSSPSMAKAIL---- 69 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~~~-----~~~~~~~~~~~~~~~g~-i~~~~~~~~~~-------v~i~~p~~~~~il---- 69 (122)
..+.+.||||.++|++|+++.+ ..+++.++.++.++||+ ||++++++.+. +++.+++..+.++
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 3456789999999999998765 46888999999999999 99999987776 6666665543111
Q ss_pred ------------------H-----------------------H----------HHhHHHHHHHHHHHHHhCCCCceeeHH
Q 036837 70 ------------------K-----------------------N----------YLRRKKINDLLGYVEENCPAGKAIGFG 98 (122)
Q Consensus 70 ------------------~-----------------------~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~ 98 (122)
. . +.+.+.+.++++.+.+....++++|+.
T Consensus 104 v~k~~~~~~~~~~~~~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~vdl~ 183 (495)
T 3dsk_A 104 VEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFG 183 (495)
T ss_dssp EECSSCTTSSSCCCGGGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHSSEESH
T ss_pred ccccccccccCCCCccccCCCcceeeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccHH
Confidence 0 0 344556667777776533335689999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC
Q 036837 99 QAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 99 ~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
+++..++++++++++||.+.+.
T Consensus 184 ~~~~~~~~~~i~~~~~G~~~~~ 205 (495)
T 3dsk_A 184 GSSDGTAFNFLARAFYGTNPAD 205 (495)
T ss_dssp HHHHHHHHHHHHHHHHSCCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCcch
Confidence 9999999999999999987753
No 26
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.55 E-value=1e-13 Score=93.95 Aligned_cols=91 Identities=15% Similarity=0.197 Sum_probs=78.1
Q ss_pred CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------------------------- 71 (122)
..++..+.+|+++||+|+++++++.+.|+++||+++++|+.+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~ 89 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQ 89 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCTTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhccccccchhHHHHHHhhcccccCCCcccCCChHHHHHH
Confidence 456788999999999999999999999999999999999842
Q ss_pred -----------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCCC
Q 036837 72 -----------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 -----------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
+.+.++++++++.+.+....++++|+.+++..+++|+|+.++||.+++.
T Consensus 90 Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~ 155 (456)
T 3mdm_A 90 RRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSM 155 (456)
T ss_dssp HHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCG
T ss_pred HhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhh
Confidence 3445667778888876655567899999999999999999999998863
No 27
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.54 E-value=1.2e-14 Score=98.52 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=77.3
Q ss_pred CCCCCCCCCCCCCceeeccC-CCCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH-------------
Q 036837 7 LGGRQVRPGPKPYPVIGNLL-EPGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~-~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~------------- 71 (122)
++.++.||||+++|++|++. .+..+++..+.++ ++||||+++++ ++.+.++++||+++++|+.+
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~ 100 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADPRFSKDWRNSTTP 100 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCTTEECCGGGCSSC
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCCCCcccccccccc
Confidence 44467899999999999975 3456788889999 89999999997 77889999999999999853
Q ss_pred ----------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHH
Q 036837 72 ----------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSS 110 (122)
Q Consensus 72 ----------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~ 110 (122)
+.+.+.++++++.+.+ ..++++|+.+++ ..+++|+|+
T Consensus 101 ~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~vi~ 178 (436)
T 2cd8_A 101 LTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLA--APDGRADLMESLAWPLPITVIS 178 (436)
T ss_dssp CCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHHHHHHH
T ss_pred cccccccccccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHHHHHHH
Confidence 3345556666666653 235689999987 579999999
Q ss_pred HHHhcCCCC
Q 036837 111 NTIFSNNLV 119 (122)
Q Consensus 111 ~~~fG~~~~ 119 (122)
. +||.+.+
T Consensus 179 ~-~~G~~~~ 186 (436)
T 2cd8_A 179 E-LLGVPEP 186 (436)
T ss_dssp H-HHTCCGG
T ss_pred H-HhCCCHH
Confidence 8 7998764
No 28
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.53 E-value=6.8e-15 Score=100.07 Aligned_cols=111 Identities=21% Similarity=0.266 Sum_probs=83.4
Q ss_pred CCCCCCCCCCCC-CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------
Q 036837 7 LGGRQVRPGPKP-YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------- 71 (122)
Q Consensus 7 ~~~~~~~p~p~~-~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------- 71 (122)
+...+.||||++ +|++||++.+..+++..+.+++++||+++++++++.+.++++||+++++++.+
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 93 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVASLDQTSYAQVLM 93 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTTEESHHHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcccCCchHHHHHHH
Confidence 444678999887 89999998776678999999999999999999999999999999999999954
Q ss_pred ----------------------HHhHHHHHHHHHHHHHh----C----CC-----CceeeHHHHHHHHHHHHHHHHHhcC
Q 036837 72 ----------------------YLRRKKINDLLGYVEEN----C----PA-----GKAIGFGQAAFHTSLNLSSNTIFSN 116 (122)
Q Consensus 72 ----------------------~~~~~~~~~~~~~l~~~----~----~~-----~~~~~~~~~~~~~~~~ii~~~~fG~ 116 (122)
.+....++.+...+.+. . .. ...+++...+..+++++++...||.
T Consensus 94 ~~~~g~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 173 (475)
T 3b98_A 94 KRIFNMILPSHNPESEKKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGA 173 (475)
T ss_dssp HHTTCCCCTTCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCCChHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCC
Confidence 11122223333222221 1 11 1247889999999999999999996
Q ss_pred C
Q 036837 117 N 117 (122)
Q Consensus 117 ~ 117 (122)
+
T Consensus 174 ~ 174 (475)
T 3b98_A 174 E 174 (475)
T ss_dssp T
T ss_pred c
Confidence 5
No 29
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.49 E-value=2.4e-13 Score=91.07 Aligned_cols=104 Identities=12% Similarity=0.109 Sum_probs=80.0
Q ss_pred CCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHHHH-------------------
Q 036837 12 VRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAILKN------------------- 71 (122)
Q Consensus 12 ~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il~~------------------- 71 (122)
.||||+++|++|++.. +++..+.++. +||||+++.++ +.+.+++++++.+++++.+
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 5899999999999764 6777888885 69999998864 5566678999999999864
Q ss_pred --------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHH
Q 036837 72 --------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTI 113 (122)
Q Consensus 72 --------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 113 (122)
+.+.++++++++.+.+....++++|+.+.+...+.++++..+
T Consensus 78 ~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~ 157 (404)
T 1jfb_A 78 KQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTL 157 (404)
T ss_dssp HHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHH
T ss_pred cchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 344556677777776654345689999999999999999999
Q ss_pred hcCCCC
Q 036837 114 FSNNLV 119 (122)
Q Consensus 114 fG~~~~ 119 (122)
||.+++
T Consensus 158 ~G~~~~ 163 (404)
T 1jfb_A 158 LGVPFN 163 (404)
T ss_dssp HTCCGG
T ss_pred cCCCHH
Confidence 998764
No 30
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.49 E-value=1.1e-14 Score=97.21 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=78.5
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH------------------------
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------------ 71 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------------ 71 (122)
++.+|++||+..+..+++..+.+++++|||+++ ++++.+.++++||+++++|+.+
T Consensus 4 ~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~~f~~~~~~~~~~~~~~g~~l~~~ 82 (389)
T 1n97_A 4 LSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGRGLLTD 82 (389)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCTTEECCSHHHHHHHHHHCSSTTTC
T ss_pred cccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcCCCCCChhHHHHHHHHhCCccccC
Confidence 456799999877766788899999999999999 8888899999999999999853
Q ss_pred --------------HHh-------HHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCC
Q 036837 72 --------------YLR-------RKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 --------------~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~ 119 (122)
.+. ...+.+.++.+.+... ++++|+.+++..+++|+++.++||.+++
T Consensus 83 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~-~~~~dl~~~~~~~~~~vi~~~~fG~~~~ 150 (389)
T 1n97_A 83 WGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWR-GEERDLDHEMLALSLRLLGRALFGKPLS 150 (389)
T ss_dssp CHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCC-SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHcc-CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence 011 1112222222222223 6789999999999999999999999875
No 31
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.43 E-value=2.6e-13 Score=91.24 Aligned_cols=98 Identities=11% Similarity=-0.023 Sum_probs=76.4
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcC-CeEEEecCCeeEEEecCHHHHHHHHHH-------------------------
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHG-RIMSLRLGLVTTVVVSSPSMAKAILKN------------------------- 71 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g-~i~~~~~~~~~~v~i~~p~~~~~il~~------------------------- 71 (122)
+.|++|++..+..+++.++.+++++|| ||++++.++.+.+++++|++++.++..
T Consensus 7 g~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~l~~ 86 (417)
T 1izo_A 7 HDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQG 86 (417)
T ss_dssp BCCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTCTTTEECTTCSCHHHHTTTTCTTCGGG
T ss_pred CCCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhcccccccccccccchhhhhccccceee
Confidence 348999988776678889999999998 999999888899999999999865532
Q ss_pred --------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCCC
Q 036837 72 --------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 --------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
+.+.+.++++++.+ ..++++|+.+.+..+++++|+.+ ||.++++
T Consensus 87 ~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l----~~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~ 156 (417)
T 1izo_A 87 MDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRW----EKADEVVLFEEAKEILCRVACYW-AGVPLKE 156 (417)
T ss_dssp CCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHH----TTSSEEEHHHHHHHHHHHHHHHH-HTCCCCT
T ss_pred cCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHH----hcCCCeeHHHHHHHHHHHHHHHH-cCCCCCc
Confidence 12223333333333 23678999999999999999998 6988764
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.38 E-value=8.9e-13 Score=88.63 Aligned_cols=99 Identities=13% Similarity=0.018 Sum_probs=75.4
Q ss_pred CCCCCCCceeeccCCCCCChHHHHHHHHHhc-CCeEEEecCCeeEEEecCHHHHHHHHHH--------------------
Q 036837 13 RPGPKPYPVIGNLLEPGGKPHKSLANLTKIH-GRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------- 71 (122)
Q Consensus 13 ~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------- 71 (122)
|||| |++|++..+..+++.++.+++++| |||+++..++.+.+++++|++++ ++.+
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~~~f~~~~~~~~~~~~~~~g 79 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDTTRFEREGAMPVAIQKTLLG 79 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCTTTEECTTCSCHHHHTTTSC
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcccccccccccchhhhhhccC
Confidence 5655 789998877667888999999999 79999998888999999999987 5533
Q ss_pred --------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCC
Q 036837 72 --------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 --------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ ++++|+.+.+..+++++++.+ ||.+++
T Consensus 80 ~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G~~~~ 154 (415)
T 3awm_A 80 QGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AGVPLP 154 (415)
T ss_dssp SSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HTCCCC
T ss_pred CcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cCCCCC
Confidence 2334445555555543 458999999999999999999 898875
Q ss_pred C
Q 036837 120 D 120 (122)
Q Consensus 120 ~ 120 (122)
+
T Consensus 155 ~ 155 (415)
T 3awm_A 155 D 155 (415)
T ss_dssp G
T ss_pred c
Confidence 3
No 33
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.38 E-value=1.6e-13 Score=93.34 Aligned_cols=114 Identities=11% Similarity=0.111 Sum_probs=80.1
Q ss_pred CCCCCCCCCCCCCceeeccCCC-----CC-ChHHHHHHHHHhcCC-eEEEecCC-------eeEEEecCHHHH-------
Q 036837 7 LGGRQVRPGPKPYPVIGNLLEP-----GG-KPHKSLANLTKIHGR-IMSLRLGL-------VTTVVVSSPSMA------- 65 (122)
Q Consensus 7 ~~~~~~~p~p~~~p~~g~~~~~-----~~-~~~~~~~~~~~~~g~-i~~~~~~~-------~~~v~i~~p~~~------- 65 (122)
..+.+.+|||.++|++|++..+ .. +++.++.++.++||+ ||++++++ ...|++.+....
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 3566788999999999998764 34 678899999999999 99998853 233442222211
Q ss_pred --------------------------------------HHHHHH----------HHhHHHHHHHHHHHHHhCCCCceeeH
Q 036837 66 --------------------------------------KAILKN----------YLRRKKINDLLGYVEENCPAGKAIGF 97 (122)
Q Consensus 66 --------------------------------------~~il~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~ 97 (122)
+.++.. +.+.+.++++++.+.+....++++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~vdl 164 (473)
T 3dan_A 85 KVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAF 164 (473)
T ss_dssp TEECSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCEEC
T ss_pred ceeccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccH
Confidence 112211 33344556666666543223568999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC
Q 036837 98 GQAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 98 ~~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
.+++..++++++++++||.+++.
T Consensus 165 ~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 165 NDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp HHHHHHHHHHHHHHHHHSCCGGG
T ss_pred HHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999988753
No 34
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.30 E-value=9.6e-12 Score=83.55 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=78.2
Q ss_pred CCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEe----c-CC-eeEEEecCHHHHHHHH-HH----------
Q 036837 9 GRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLR----L-GL-VTTVVVSSPSMAKAIL-KN---------- 71 (122)
Q Consensus 9 ~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~----~-~~-~~~v~i~~p~~~~~il-~~---------- 71 (122)
..++||||+++|+. +..+++..+.++ ++||+|++++ + ++ .+.++++||+++++|+ .+
T Consensus 8 ~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~~~~~~~~~ 81 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFT 81 (406)
T ss_dssp CCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSSEECCCCC-
T ss_pred CCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcccccccccc
Confidence 35678899988876 346788899999 9999999999 6 78 8999999999999999 21
Q ss_pred --------------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHH-HHH
Q 036837 72 --------------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFH-TSL 106 (122)
Q Consensus 72 --------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ 106 (122)
+.+.++++++++.+.. .++++|+.+.+.. +++
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~ 158 (406)
T 1ued_A 82 QSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFADPVGA 158 (406)
T ss_dssp --------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTHHHHHH
T ss_pred ccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHhHH
Confidence 2334455666666653 3568999998875 999
Q ss_pred HHHHHHHhcCCC
Q 036837 107 NLSSNTIFSNNL 118 (122)
Q Consensus 107 ~ii~~~~fG~~~ 118 (122)
|+++ .+||.+.
T Consensus 159 ~vi~-~~~G~~~ 169 (406)
T 1ued_A 159 HALC-ELLGIPR 169 (406)
T ss_dssp HHHH-HHHTCCH
T ss_pred HHHH-HHcCCCH
Confidence 9999 5799864
No 35
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.25 E-value=6e-11 Score=79.81 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=76.5
Q ss_pred CCCCCCCCCCceeeccCCCCCChHHHHHHHHHhc-CCeEEEec-CCeeEEEecCHHHHHHHHHH----------------
Q 036837 10 RQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIH-GRIMSLRL-GLVTTVVVSSPSMAKAILKN---------------- 71 (122)
Q Consensus 10 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~-g~i~~~~~-~~~~~v~i~~p~~~~~il~~---------------- 71 (122)
...||+|+++|.+..-..+..+++..+.++ ++| |||+++++ ++.+.++++||+++++||.+
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~ 82 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPRLSSNRTDDNFPATS 82 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTTEECCTTSTTSCCCS
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcccccCcccccccccc
Confidence 356777777776533334567888899999 788 99999997 78899999999999999843
Q ss_pred -----------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHH-HHHHHH
Q 036837 72 -----------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFH-TSLNLS 109 (122)
Q Consensus 72 -----------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~ii 109 (122)
+.+.+.++++++.+.+ .++++|+.+.+.. ++++++
T Consensus 83 ~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi 159 (412)
T 2zbx_A 83 PRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVPSMVI 159 (412)
T ss_dssp GGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHH
T ss_pred cccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHH
Confidence 2233445555555553 2568999998874 999999
Q ss_pred HHHHhcCCCC
Q 036837 110 SNTIFSNNLV 119 (122)
Q Consensus 110 ~~~~fG~~~~ 119 (122)
+. +||.+.+
T Consensus 160 ~~-~~G~~~~ 168 (412)
T 2zbx_A 160 CR-LLGVPYA 168 (412)
T ss_dssp HH-HHTCCGG
T ss_pred HH-HcCCCHH
Confidence 97 7998764
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.14 E-value=2.6e-10 Score=76.88 Aligned_cols=110 Identities=8% Similarity=-0.009 Sum_probs=72.6
Q ss_pred ccCCCCCCCCCCCCCCCCcee--eccCCC-----CCChHHHHHHHHHhcC--CeEEEe-cCCeeEEEecCHHHHHHHHHH
Q 036837 2 ARSGRLGGRQVRPGPKPYPVI--GNLLEP-----GGKPHKSLANLTKIHG--RIMSLR-LGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 2 ~~~~~~~~~~~~p~p~~~p~~--g~~~~~-----~~~~~~~~~~~~~~~g--~i~~~~-~~~~~~v~i~~p~~~~~il~~ 71 (122)
.+-+...+.++||+|.+.|.. +.+..+ ..+++..+.++. +|| +|++++ ++ +.++++|++++++|+.+
T Consensus 2 ~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~ 78 (415)
T 2zwu_A 2 TTETIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED 78 (415)
T ss_dssp ---------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC
T ss_pred CcccccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC
Confidence 444556678899999988764 443221 246788888885 799 999998 54 68999999999999964
Q ss_pred ---------------------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHH
Q 036837 72 ---------------------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQA 100 (122)
Q Consensus 72 ---------------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 100 (122)
+.+.+.++++++.+.+ ++++|+.+.
T Consensus 79 ~~~f~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~ 154 (415)
T 2zwu_A 79 YRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRP----QGQCNFTED 154 (415)
T ss_dssp TTTEETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGG----GTEEEHHHH
T ss_pred ccccCCCcccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHH
Confidence 1112223333333332 247999986
Q ss_pred H-HHHHHHHHHHHHhcCCCC
Q 036837 101 A-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 101 ~-~~~~~~ii~~~~fG~~~~ 119 (122)
+ ..+++++++.+ ||.+++
T Consensus 155 ~~~~~~~~vi~~~-~G~~~~ 173 (415)
T 2zwu_A 155 YAEPFPIRIFMLL-AGLPEE 173 (415)
T ss_dssp TTTHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHHHHHH-cCCCHH
Confidence 5 78999999999 999875
No 37
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.05 E-value=1.1e-09 Score=73.62 Aligned_cols=102 Identities=15% Similarity=0.246 Sum_probs=74.9
Q ss_pred CCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEec-CCee-EEEecCHHHHHHHHHH----------------
Q 036837 10 RQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRL-GLVT-TVVVSSPSMAKAILKN---------------- 71 (122)
Q Consensus 10 ~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~-~v~i~~p~~~~~il~~---------------- 71 (122)
...+|+|+.+|+.++ ...+++..+.++. +|||++++++ ++.+ .++++||+++++||.+
T Consensus 7 ~~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~ 82 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRL 82 (406)
T ss_dssp -CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCTTEESTTTTTTTBCBS
T ss_pred hhhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCCCccCCcCCCCCcccc
Confidence 456777777777766 3467888888885 7999999986 5665 9999999999999742
Q ss_pred ---------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHH
Q 036837 72 ---------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSN 111 (122)
Q Consensus 72 ---------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~ 111 (122)
+.+.+.++++++.+.+ .++++|+...+. .+++|+++.
T Consensus 83 ~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~ 159 (406)
T 1s1f_A 83 APHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIAVICE 159 (406)
T ss_dssp SSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHHHHHH
T ss_pred cccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHHHHHH
Confidence 2233445555555553 256899987764 799999998
Q ss_pred HHhcCCCC
Q 036837 112 TIFSNNLV 119 (122)
Q Consensus 112 ~~fG~~~~ 119 (122)
+||.+.+
T Consensus 160 -~~G~~~~ 166 (406)
T 1s1f_A 160 -LMGVPAT 166 (406)
T ss_dssp -HHTCCGG
T ss_pred -HhCCCHH
Confidence 6998765
No 38
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.05 E-value=1.4e-09 Score=73.11 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=67.4
Q ss_pred CCCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH----------------------------------
Q 036837 27 EPGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN---------------------------------- 71 (122)
Q Consensus 27 ~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~---------------------------------- 71 (122)
.+..+++..+.+| ++||||+++++ ++.+.++++||+++++||.+
T Consensus 21 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 99 (408)
T 3abb_A 21 TCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD 99 (408)
T ss_dssp SSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTTEECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred ccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCCcccccccccccccccCCccccccccccccCCc
Confidence 3456788899999 89999999997 78899999999999999843
Q ss_pred -----------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 72 -----------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.. .++++|+.+.+. .+++++++. +||.+.+
T Consensus 100 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 167 (408)
T 3abb_A 100 PVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYG 167 (408)
T ss_dssp THHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred hHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 1223334455555542 356899999886 499999997 7998764
No 39
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.05 E-value=1.8e-09 Score=72.47 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=69.9
Q ss_pred CCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHH----------------------------H-------
Q 036837 27 EPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILK----------------------------N------- 71 (122)
Q Consensus 27 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~----------------------------~------- 71 (122)
.+..+++..+.++ ++||||+++++++.+.++++||+++++|+. .
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTTEESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCCccccccccccccccccccccccccccccccccc
Confidence 4457889999999 999999999988889999999999999873 1
Q ss_pred -------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 72 -------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+. .+++++|+.+.+. .+++|+|+. +||.+.+
T Consensus 91 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 162 (408)
T 1odo_A 91 YGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQD 162 (408)
T ss_dssp CHHHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH
T ss_pred CChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHH
Confidence 23344556666666543 2367899999887 599999996 7998653
No 40
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.03 E-value=8.5e-10 Score=73.46 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=69.4
Q ss_pred CCChHHHHHHHHHhcCCeEEEecCC----eeEEEecCHHHHHHHHHH---------------------------------
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRLGL----VTTVVVSSPSMAKAILKN--------------------------------- 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~~~----~~~v~i~~p~~~~~il~~--------------------------------- 71 (122)
..+++..+.++ ++||||++++.++ .+.++++||+++++|+.+
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 89 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDHTR 89 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHHHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhHHH
Confidence 46788899998 5999999999876 899999999999999954
Q ss_pred ------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCCC
Q 036837 72 ------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 ------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~~ 120 (122)
+.+.+.++++++.+.+ .++++|+.+.+...+.+.++..+||.+.++
T Consensus 90 ~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~ 153 (384)
T 3oo3_A 90 LRRTVAPAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD 153 (384)
T ss_dssp HHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 3334555666666654 467899999999988888888899987653
No 41
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.03 E-value=2e-09 Score=72.85 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=73.4
Q ss_pred CCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEe--------cCCeeEEEecCHHHHHHHHHH-----------
Q 036837 11 QVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLR--------LGLVTTVVVSSPSMAKAILKN----------- 71 (122)
Q Consensus 11 ~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~--------~~~~~~v~i~~p~~~~~il~~----------- 71 (122)
..||.|..+++++.......+++..+.++ ++||||+++. +|+.+.+++++++.+++|+.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~ 96 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGV 96 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTTTCS
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCcccc
Confidence 45555655555443322235688899998 7899999998 455789999999999999955
Q ss_pred ------------------------------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHH-H
Q 036837 72 ------------------------------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAA-F 102 (122)
Q Consensus 72 ------------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ 102 (122)
+.+.+.++++++.+.. ++++|+...+ .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~ 172 (433)
T 3ivy_A 97 IPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFVEQVSC 172 (433)
T ss_dssp CCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHHHHTTS
T ss_pred cccccccccccccccccCCccccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHHHHHHH
Confidence 3334455566666553 4579998887 9
Q ss_pred HHHHHHHHHHHhcCCC
Q 036837 103 HTSLNLSSNTIFSNNL 118 (122)
Q Consensus 103 ~~~~~ii~~~~fG~~~ 118 (122)
.+++++|+.+ ||.+.
T Consensus 173 ~~~~~vi~~l-~G~~~ 187 (433)
T 3ivy_A 173 ELPLQAIAGL-LGVPQ 187 (433)
T ss_dssp HHHHHHHHHH-HTCCH
T ss_pred HHHHHHHHHH-cCCCH
Confidence 9999999996 89753
No 42
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=98.99 E-value=3.3e-09 Score=71.14 Aligned_cols=87 Identities=11% Similarity=0.154 Sum_probs=68.9
Q ss_pred CCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH-----------------------------------
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN----------------------------------- 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~----------------------------------- 71 (122)
+..+++..+.++ ++||+|+++++ ++.+.++++||+++++|+.+
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 95 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDSSFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEH 95 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCTTEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHH
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCCCcccccccccccccccccccccccccccCCchhH
Confidence 345677788888 89999999997 78999999999999999853
Q ss_pred --------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 72 --------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 --------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ .++++|+...+. .+++++|+. +||.+.+
T Consensus 96 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 160 (403)
T 3aba_A 96 TSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVE 160 (403)
T ss_dssp HHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 3345556677776664 256899987764 799999998 7998764
No 43
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=98.91 E-value=5.1e-09 Score=70.38 Aligned_cols=99 Identities=12% Similarity=0.136 Sum_probs=65.0
Q ss_pred CCCCCCCCCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------
Q 036837 5 GRLGGRQVRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------- 71 (122)
Q Consensus 5 ~~~~~~~~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------- 71 (122)
+..++.+.+|||.. ..+++..+.++.+ |||| +.++.+.+++++++.+++++.+
T Consensus 13 ~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~ 78 (411)
T 2jjn_A 13 RTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTATFSSDPTRVIE 78 (411)
T ss_dssp ----CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTTTEESCGGGGST
T ss_pred cccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcccccCcccccCC
Confidence 34555666777662 2457788888876 9998 5566678999999999999976
Q ss_pred --------------------------HHh-------HHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCC
Q 036837 72 --------------------------YLR-------RKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNN 117 (122)
Q Consensus 72 --------------------------~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~ 117 (122)
.+. ...+.+.++.+.+. .++++|+.+.+ ..+++|+|+.+ ||.+
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~--~~~~~d~~~~~~~~~~~~vi~~~-fG~~ 155 (411)
T 2jjn_A 79 GASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTRSLLAD--AGESFDLVDVLAFPLPVTIVAEL-LGLP 155 (411)
T ss_dssp TCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHT--SCSEEEHHHHTTTHHHHHHHHHH-HTCC
T ss_pred cccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHHHHHHH-cCCC
Confidence 111 11122222222222 34589998554 68999999998 9998
Q ss_pred CCC
Q 036837 118 LVD 120 (122)
Q Consensus 118 ~~~ 120 (122)
.++
T Consensus 156 ~~~ 158 (411)
T 2jjn_A 156 PMD 158 (411)
T ss_dssp SCC
T ss_pred HHH
Confidence 754
No 44
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=98.89 E-value=3e-08 Score=66.77 Aligned_cols=88 Identities=14% Similarity=0.074 Sum_probs=70.4
Q ss_pred CCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHHHH-----------------------------------
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAILKN----------------------------------- 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il~~----------------------------------- 71 (122)
+..+++..+.++.++ |||++++++ +.+.+++++|+++++++.+
T Consensus 27 ~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 105 (417)
T 3tyw_A 27 CPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDPRVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP 105 (417)
T ss_dssp STTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCTTEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred cccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCCCcccCCccccccccccccccccccccchhhcCCc
Confidence 357888899999988 999999986 5889999999999999954
Q ss_pred ----------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCCC
Q 036837 72 ----------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 ----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~~ 120 (122)
+.+.+.++++++.+.+ .++++|+.+.+ ..+++++++.+ ||.++++
T Consensus 106 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 173 (417)
T 3tyw_A 106 EHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHD 173 (417)
T ss_dssp HHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTT
T ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHH
Confidence 3334455666666654 35679999988 58999999997 9998764
No 45
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=98.87 E-value=2.1e-08 Score=67.95 Aligned_cols=87 Identities=8% Similarity=-0.056 Sum_probs=66.6
Q ss_pred CChHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHHHH-------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAILKN------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il~~------------------------------- 71 (122)
.+++..+.++. +||||++++.+ +.+.++++||+++++|+.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 122 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDD 122 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCCT
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCCc
Confidence 35677788885 68999999985 6689999999999999865
Q ss_pred -----------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 72 -----------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+. ..++++|+.+.+ ..+++|+|+.+ ||.+++
T Consensus 123 ~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~ 192 (435)
T 2wm5_A 123 PRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKA 192 (435)
T ss_dssp THHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHH
Confidence 23344556666666543 224589999876 78999999999 999875
No 46
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=98.84 E-value=1.3e-08 Score=68.48 Aligned_cols=43 Identities=26% Similarity=0.239 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHH
Q 036837 27 EPGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 27 ~~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~ 70 (122)
.+..+++..+.++ ++|||++++++ ++.+.++++||+++++|+.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~ 57 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLT 57 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHT
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHc
Confidence 3457788999999 99999999997 8899999999999999974
No 47
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=98.83 E-value=1.6e-08 Score=68.22 Aligned_cols=86 Identities=9% Similarity=0.030 Sum_probs=67.6
Q ss_pred CCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH-----------------------------------
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN----------------------------------- 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~----------------------------------- 71 (122)
+..+++..+.++ ++|||++++++ ++.+.++++||+++++|+.+
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~ 113 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSR 113 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTTEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHHH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCCcccCccccccccccCcccccccCccCCchHHHH
Confidence 346788899999 89999999996 78899999999999999853
Q ss_pred ------------------HHhHHHHHHHHHHHHHhCCCCc-eeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 72 ------------------YLRRKKINDLLGYVEENCPAGK-AIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 ------------------~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ ++ ++|+.+.+. .+++++|+. +||.+.+
T Consensus 114 ~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 176 (417)
T 2y5n_A 114 LRRLVVKAFTARRAESLRPRAREIAHELVDQMAA----TGQPADLVAMFARQLPVRVICE-LLGVPSA 176 (417)
T ss_dssp HHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHH----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCCeeHHHHHHHHhHHHHHHH-HcCCCHH
Confidence 2334455666666653 34 799987775 699999998 6998764
No 48
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=98.83 E-value=7.6e-08 Score=64.45 Aligned_cols=88 Identities=14% Similarity=0.027 Sum_probs=62.6
Q ss_pred CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------------------------- 71 (122)
.+++..+.++ ++||||++++.++.+.+++++++++++++.+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~ 91 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRL 91 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchhhcCCchHHHH
Confidence 5778888888 5899999999999999999999999999965
Q ss_pred ------HHh-------HHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 72 ------YLR-------RKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 ------~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
.+. ...+.+.++.+.+....++.+|+...+ ..+++++++.+ ||.+.+
T Consensus 92 Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 152 (404)
T 3ejb_B 92 RTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANI-IGVPEE 152 (404)
T ss_dssp HHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHH-cCCCHH
Confidence 011 111222223332223346789986555 56999999984 898764
No 49
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=98.72 E-value=3.1e-08 Score=66.29 Aligned_cols=90 Identities=12% Similarity=0.008 Sum_probs=64.0
Q ss_pred CCCChHHHHHHHHHhc--CCeEEEecCCeeEEEecCHHHHHHHHHH----------------------------------
Q 036837 28 PGGKPHKSLANLTKIH--GRIMSLRLGLVTTVVVSSPSMAKAILKN---------------------------------- 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~--g~i~~~~~~~~~~v~i~~p~~~~~il~~---------------------------------- 71 (122)
+..+++..+.++.++| |||++++.++ +.++++||+.+++|+.+
T Consensus 17 ~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 95 (398)
T 4fb2_A 17 PDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKY 95 (398)
T ss_dssp TTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHHH
T ss_pred hhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHHH
Confidence 4578899999999999 9999999875 58899999999999955
Q ss_pred ------HHh-------HHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 72 ------YLR-------RKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 ------~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
.+. ...+.+.++.+.+....++.+|+...+ ..+++++++. +||.+.+
T Consensus 96 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 156 (398)
T 4fb2_A 96 RQLVAKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAI-LLGLPPE 156 (398)
T ss_dssp HHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHH-HTTSCGG
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 000 112222222222222334578975554 6899999999 7998754
No 50
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=98.69 E-value=3.1e-08 Score=66.89 Aligned_cols=57 Identities=9% Similarity=0.062 Sum_probs=43.7
Q ss_pred CCCCCCCCCCCceeeccCCCC-----CChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH
Q 036837 9 GRQVRPGPKPYPVIGNLLEPG-----GKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 9 ~~~~~p~p~~~p~~g~~~~~~-----~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~ 71 (122)
++++||| ++|++.... .+++..+.++.+ ||||++++. |+.+.+++++++.+++++.+
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~ 66 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ 66 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC
Confidence 3567777 788764442 346777888866 799999997 67889999999999998744
No 51
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=98.65 E-value=3.1e-07 Score=61.74 Aligned_cols=42 Identities=21% Similarity=0.128 Sum_probs=36.9
Q ss_pred CCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~ 71 (122)
..+++..+.++ ++||||+++++ ++.+.++++||+++++|+.+
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~ 67 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHD 67 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTC
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcC
Confidence 45678889999 89999999996 78899999999999999854
No 52
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=98.64 E-value=1.6e-07 Score=63.23 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=64.6
Q ss_pred CChHHHHHHHHHhcCCeEEEecCC--eeEEEecCHHHHHHHHHH------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGL--VTTVVVSSPSMAKAILKN------------------------------------ 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~--~~~v~i~~p~~~~~il~~------------------------------------ 71 (122)
.+++..+.++. +||||+++++++ .+.+++++|+.+++|+.+
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~ 105 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDPRFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDHN 105 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCTTEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHHH
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCCCcccCCCCCCCccccccchhccccccccCCchHHH
Confidence 45568888887 899999998764 789999999999999742
Q ss_pred -------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 72 -------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ .++++|+.+.+. .+++|+|+. +||.+.+
T Consensus 106 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 169 (411)
T 2dkk_A 106 RLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAA 169 (411)
T ss_dssp HHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSS
T ss_pred HHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 2334455566666654 245899998776 699999998 5998764
No 53
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=98.62 E-value=3.5e-07 Score=61.55 Aligned_cols=43 Identities=14% Similarity=0.123 Sum_probs=38.2
Q ss_pred CCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
+..+++..+.++ ++|||++++++++.+.+++++|+++++++.+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~ 60 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVD 60 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTC
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhC
Confidence 346788899999 8999999999989999999999999999843
No 54
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=98.59 E-value=1.5e-06 Score=58.29 Aligned_cols=42 Identities=19% Similarity=0.117 Sum_probs=37.7
Q ss_pred CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
..+++..+.++ ++||||+++++++.+.+++++|+++++++.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~ 54 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSD 54 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHC
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcC
Confidence 46788899999 8999999999989999999999999999853
No 55
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=98.58 E-value=2.6e-07 Score=62.88 Aligned_cols=83 Identities=14% Similarity=-0.013 Sum_probs=63.4
Q ss_pred hHHHHHHHHHhcCCeE--EEe-cCCeeEEEecCHHHHHHHHHH-------------------------------------
Q 036837 32 PHKSLANLTKIHGRIM--SLR-LGLVTTVVVSSPSMAKAILKN------------------------------------- 71 (122)
Q Consensus 32 ~~~~~~~~~~~~g~i~--~~~-~~~~~~v~i~~p~~~~~il~~------------------------------------- 71 (122)
++..+.++ ++||||+ ++. .++.+.+++++++.+++++.+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~ 125 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLV 125 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccCcc
Confidence 66677777 6789999 887 677899999999999999865
Q ss_pred ---------------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 72 ---------------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 ---------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.++++++++.+.+ .++++|+...+ ..+++++|+.+ ||.+.+
T Consensus 126 ~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~ 197 (450)
T 3tkt_A 126 QMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPPE 197 (450)
T ss_dssp GCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCGG
T ss_pred cCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCChh
Confidence 2223444555555544 26789998888 69999999995 998654
No 56
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=98.55 E-value=6.1e-07 Score=60.42 Aligned_cols=43 Identities=23% Similarity=0.146 Sum_probs=37.1
Q ss_pred CCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~ 71 (122)
+..+++..+.++. +|||++++++ ++.+.+++++|+++++++.+
T Consensus 20 ~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~ 63 (413)
T 2z36_A 20 CPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLAD 63 (413)
T ss_dssp BTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHC
T ss_pred cccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcC
Confidence 3467888888887 7899999997 78899999999999999854
No 57
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=98.52 E-value=4.3e-07 Score=60.74 Aligned_cols=82 Identities=7% Similarity=-0.025 Sum_probs=59.7
Q ss_pred CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------------------------------
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------------------------- 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------------------------- 71 (122)
..+++..+.++++ ||||+++. . +.+++++|+++++++.+
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~ 92 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPELFSNAGGIRPDQPALPMMIDMDDPAHLLRRKLVNA 92 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTTTEESTTCSSTTSCCCSSGGGCCTTHHHHHHHHHGG
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcccccCccccCCcccccccccccCchHHHHHHHHhhh
Confidence 3578888888887 99999664 3 78999999999999965
Q ss_pred -----------HHhHHHHHHHHHHHHHhCCCCceeeHHH-HHHHHHHHHHHHHHhcCCCC
Q 036837 72 -----------YLRRKKINDLLGYVEENCPAGKAIGFGQ-AAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+ ..++++|+.. ....+++|+|+.+ ||.+.+
T Consensus 93 ~fs~~~l~~~~~~i~~~~~~l~~~l----~~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~ 147 (398)
T 2xkr_A 93 GFTRKRVKDKEASIAALCDTLIDAV----CERGECDFVRDLAAPLPMAVIGDM-LGVRPE 147 (398)
T ss_dssp GSCHHHHHTTHHHHHHHHHHHHHTT----TTTSEEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHhh----hhcCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 22223333333333 2345899985 4568999999998 998765
No 58
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=98.49 E-value=7.4e-07 Score=59.60 Aligned_cols=81 Identities=19% Similarity=0.105 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------------------------- 71 (122)
.+++..+..+ ++||||++ + +.+.+++++|++++++|.+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~ 88 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDHG 88 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCTTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHHH
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCCCcccCcccccccccccccccccccccccccCCchhHH
Confidence 4567777766 58999998 6 5789999999999998743
Q ss_pred -------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHH-HHHHHHHHHHHHHhcCCCC
Q 036837 72 -------------------YLRRKKINDLLGYVEENCPAGKAIGFGQA-AFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+. .++++|+... ...+++++++.+ ||.+.+
T Consensus 89 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~dl~~~~~~~~~~~vi~~~-~G~~~~ 151 (397)
T 3buj_A 89 RLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPAL----ARGAMDVVDELAYPLALRAVLGL-LGLPAA 151 (397)
T ss_dssp HHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHH----TTTEEEHHHHTHHHHHHHHHHHH-HTCCGG
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHh----hcCCeehHHHHHHHhHHHHHHHH-hCCCHH
Confidence 222333444444443 2458998755 578999999998 998765
No 59
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=98.47 E-value=1.6e-06 Score=58.04 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=64.3
Q ss_pred CCCChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH---H-H-----------------------------
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN---Y-L----------------------------- 73 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~---~-~----------------------------- 73 (122)
+..+++..+.+| ++|||++++++ ++.+.++++||+++++++.+ . -
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~ 92 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADA 92 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTTEESGGGGSTTCCCSSCCSSCGGGGGHHHHHHHT
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCCcccccCccccccccccccCCchhhhhhhhHHHH
Confidence 346788899999 99999999997 78899999999999999842 0 0
Q ss_pred --------------------hHHHHHHHHHHHHHhCCCCceeeHHHHHH-HHHHHHHHHHHhcCCCC
Q 036837 74 --------------------RRKKINDLLGYVEENCPAGKAIGFGQAAF-HTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 74 --------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ii~~~~fG~~~~ 119 (122)
+.+.++++++.+.+ .++++|+.+.+. .+++++++. +||.+.+
T Consensus 93 ~~R~~~~~~fs~~~~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 155 (396)
T 1n40_A 93 GLRKAVMKAITPKAPGLEQFLRDTANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQE 155 (396)
T ss_dssp TCHHHHHHHTSSCSTTHHHHHHHHHHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGG
T ss_pred HHHHHHHHhhChHHHHhHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChh
Confidence 01122333333332 156899986664 899999998 8998765
No 60
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=98.43 E-value=1.8e-06 Score=58.32 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHhcCCeEEEecC--CeeEEEecCHHHHHHHHH
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLG--LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~--~~~~v~i~~p~~~~~il~ 70 (122)
.+++..+.++. +||||+++++| +.+.++++||+.+++|+.
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~ 61 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLS 61 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHH
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHc
Confidence 46778888875 59999999987 678999999999998873
No 61
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=98.41 E-value=1.8e-06 Score=57.69 Aligned_cols=42 Identities=2% Similarity=-0.076 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
+..+++..+.+++++ |||+++..++ +.++++||+++++++.+
T Consensus 22 ~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~ 63 (396)
T 3oft_A 22 VEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD 63 (396)
T ss_dssp TTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC
T ss_pred hhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC
Confidence 356889999999998 9999998874 47889999999999965
No 62
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=98.39 E-value=2.7e-06 Score=57.15 Aligned_cols=86 Identities=13% Similarity=0.179 Sum_probs=60.7
Q ss_pred CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH-------------------------------------
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN------------------------------------- 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~------------------------------------- 71 (122)
..+++..+.++ ++||||++++.+ .+++++++.+++++.+
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 103 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDPP 103 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC---------CCCGGGCCTT
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcccccCcccccccccccccccccccccccchhhcCCc
Confidence 57888899888 578999998775 8999999999999864
Q ss_pred -----------HH-------hHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCCC
Q 036837 72 -----------YL-------RRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 72 -----------~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~~ 120 (122)
.+ ....+.+.++.+.+ ...++++|+...+ ..+++++++. +||.+.++
T Consensus 104 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~-l~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 169 (418)
T 3r9b_A 104 DHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD-AVDGPEFNLIDNLAYPLPVAVICR-LLGVPIED 169 (418)
T ss_dssp HHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHH-TCCSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred hHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHh-hhccCCeehHHHHhCcCCHHHHHH-HcCCCHHH
Confidence 00 01122233333333 2345689986555 6899999999 89987653
No 63
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=98.39 E-value=2.5e-06 Score=57.45 Aligned_cols=41 Identities=5% Similarity=0.056 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHhcC-CeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 30 GKPHKSLANLTKIHG-RIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g-~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
.+++..+.++.+++| ||+++..++ +.++++||+.+++|+.+
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~ 79 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRS 79 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcC
Confidence 578888888887655 899998766 48889999999999955
No 64
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=98.36 E-value=1.1e-06 Score=59.65 Aligned_cols=86 Identities=6% Similarity=-0.027 Sum_probs=58.0
Q ss_pred CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------------------------- 71 (122)
.+++..+..+ ++||||+++..++ .+++++|+.+++||.+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~~ 129 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIVV 129 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCCCCSCC-------------CCHHHHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcccccccccccccccccCCCccccCCcHHHHHHHHHHH
Confidence 3566667666 6899999987665 8999999999999976
Q ss_pred -HHhHHHH-------HHHHHHHHHhCCCCceeeHH-HHHHHHHHHHHHHHHhcCCCC
Q 036837 72 -YLRRKKI-------NDLLGYVEENCPAGKAIGFG-QAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -~~~~~~~-------~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~ii~~~~fG~~~~ 119 (122)
.+....+ .+.++.+.+....++++|+. +....+++++++. +||.+.+
T Consensus 130 ~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 185 (441)
T 3nc3_A 130 RSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMD-MLGLDKR 185 (441)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHH-HTTCCGG
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 1112222 22222232222345689974 5556699999999 5898764
No 65
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=98.34 E-value=1.3e-06 Score=58.88 Aligned_cols=88 Identities=17% Similarity=0.098 Sum_probs=60.0
Q ss_pred CChHHHHHHHHHhcCCeEEEecCC--eeEEEecCHHHHHHHHHH------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGL--VTTVVVSSPSMAKAILKN------------------------------------ 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~--~~~v~i~~p~~~~~il~~------------------------------------ 71 (122)
.+++..+.++.+ ||||+++...+ .+.+++++++.+++++.+
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~ 115 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQHR 115 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHHHH
Confidence 478888888876 89999986344 789999999999999855
Q ss_pred --------HHhHHHHHHH-------HHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 72 --------YLRRKKINDL-------LGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 --------~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
.+....++.+ ++.+.+....++++|+.+.+ ..+++++|+. +||.+.+
T Consensus 116 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 178 (415)
T 3mgx_A 116 KLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCE-ILGVPAE 178 (415)
T ss_dssp HHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHH-HHTCCGG
T ss_pred HHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHH-HcCCCHH
Confidence 0001112222 22222222334579998887 6799999998 5897643
No 66
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=98.33 E-value=3.4e-06 Score=56.82 Aligned_cols=82 Identities=10% Similarity=-0.051 Sum_probs=59.5
Q ss_pred CChHHHHHHHHHhcCCeE-----EEecCCeeEEEecCHHHHHHHHHH---------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIM-----SLRLGLVTTVVVSSPSMAKAILKN--------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~-----~~~~~~~~~v~i~~p~~~~~il~~--------------------------------- 71 (122)
.+++..+.++. +||||+ +++. .+.++++||+++++|+.+
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 101 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDP 101 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGCCT
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccCCc
Confidence 57888888884 689999 7766 578999999999999854
Q ss_pred -----------------------HHhHHHHHHHHHHHHHhCCCCceeeHH-HHHHHHHHHHHHHHHhcCCCC
Q 036837 72 -----------------------YLRRKKINDLLGYVEENCPAGKAIGFG-QAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ ++++|+. +.+..+++|+++. +||.+++
T Consensus 102 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~vdl~~~~~~~~~~~vi~~-~~G~~~~ 168 (414)
T 2uuq_A 102 PVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA----NGGGDIVTELFKPLPSMVVAH-YLGVPEE 168 (414)
T ss_dssp THHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHH----TTEEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred hhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHH-HhCCCHH
Confidence 1112233344444433 2479997 5567999999999 6998865
No 67
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=98.31 E-value=2.2e-06 Score=57.72 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHH
Q 036837 28 PGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 28 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~ 70 (122)
+..+++..+.++ ++||||++ + ++.+.+++++|+++++|+.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~ 63 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFR 63 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHT
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHc
Confidence 346788899888 78999999 6 6678999999999998863
No 68
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=98.13 E-value=8.7e-06 Score=54.48 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=55.9
Q ss_pred HHHHHhcCCeEEEecC-Ce---eEEEecCHHHHHHHH-H-------------------H---------------------
Q 036837 37 ANLTKIHGRIMSLRLG-LV---TTVVVSSPSMAKAIL-K-------------------N--------------------- 71 (122)
Q Consensus 37 ~~~~~~~g~i~~~~~~-~~---~~v~i~~p~~~~~il-~-------------------~--------------------- 71 (122)
..|.++ |||++++++ +. +.++++||+.+++++ . .
T Consensus 20 ~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 98 (398)
T 1lfk_A 20 DELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHTR 98 (398)
T ss_dssp HHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTTTEEECTTCCC-------------CCTTCGGGCCTTHHHH
T ss_pred HHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCcccccccccccccccCCcccccccccccCccccCCHHHHH
Confidence 346655 999999865 45 899999999999999 1 0
Q ss_pred ------------------HHhHHHHHHHHHHHHHhCCCCceeeHHHHHHH-HHHHHHHHHHhcCCCC
Q 036837 72 ------------------YLRRKKINDLLGYVEENCPAGKAIGFGQAAFH-TSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 ------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~ii~~~~fG~~~~ 119 (122)
+.+.+.++++++.+.+ .++++|+.+.+.. +++++++. +||.+++
T Consensus 99 ~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 161 (398)
T 1lfk_A 99 LRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRD 161 (398)
T ss_dssp HHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG
T ss_pred HHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence 3334455666666653 3567999999987 99999997 6998765
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=98.12 E-value=6.5e-05 Score=50.79 Aligned_cols=41 Identities=7% Similarity=-0.097 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHhcCCeEEEec-CCeeEEEecCHHHHHHHHHH
Q 036837 30 GKPHKSLANLTKIHGRIMSLRL-GLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~-~~~~~v~i~~p~~~~~il~~ 71 (122)
.+++..+.++.++ |||+++.. ++.+.+++++++.+++++.+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d 79 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTN 79 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcC
Confidence 4688888888876 99999986 45679999999999999865
No 70
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=98.01 E-value=5.2e-06 Score=54.52 Aligned_cols=25 Identities=8% Similarity=-0.068 Sum_probs=21.6
Q ss_pred eeeHHHHH-HHHHHHHHHHHHhcCCCC
Q 036837 94 AIGFGQAA-FHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 94 ~~~~~~~~-~~~~~~ii~~~~fG~~~~ 119 (122)
++|+.+.+ ..+++|+++.+ ||.+.+
T Consensus 91 ~~d~~~~~~~~~~~~vi~~~-~G~~~~ 116 (343)
T 2rfb_A 91 NKDIISEYAVRLPVNIISKI-LGIPDS 116 (343)
T ss_dssp TSCHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred ccCHHHHHhhhhhHHHHHHH-cCCCHH
Confidence 68998865 89999999998 998764
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=97.98 E-value=6.6e-05 Score=50.20 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=60.1
Q ss_pred CChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH--------------------------------------
Q 036837 30 GKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN-------------------------------------- 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~-------------------------------------- 71 (122)
.+++..+.++.+ +|||+++..+ .+++++++.+++++..
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~ 95 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLPIMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQTN 95 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTSTTEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCCCccccccccccccchhcccccccCCchHHHHHHHHHH
Confidence 367778877765 5899987643 5788999999999732
Q ss_pred -HHh-------HHHHHHHHHHHHHhCCCCceeeHHHHHHHHHHHHHHHHHhcCCCC
Q 036837 72 -YLR-------RKKINDLLGYVEENCPAGKAIGFGQAAFHTSLNLSSNTIFSNNLV 119 (122)
Q Consensus 72 -~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ii~~~~fG~~~~ 119 (122)
.+. ...+.+.++.+.+....++++|+...+..+++++++..+||.+.+
T Consensus 96 ~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~ 151 (394)
T 2wiy_A 96 KWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPED 151 (394)
T ss_dssp TTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCC
T ss_pred hccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHh
Confidence 011 112233333333333456789999999999999999999998754
No 72
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=97.79 E-value=3.8e-05 Score=51.69 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=31.3
Q ss_pred CCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 29 GGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 29 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
..+++.. ++.++|||++.+..++.. +++++++.+++||.+
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d 71 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARD 71 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHC
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcC
Confidence 3456666 555679999988876655 889999999999865
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=97.72 E-value=0.00031 Score=46.50 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
+..+.++ ++||||+++ + +.+++++++++++++.+
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~ 35 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNN 35 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHC
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcC
Confidence 4566667 589999987 3 57889999999988754
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=97.29 E-value=0.00036 Score=46.98 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=36.4
Q ss_pred CCCceeeccC---CCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 17 KPYPVIGNLL---EPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 17 ~~~p~~g~~~---~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
.++|.+|--+ .+..+++..+.++.+ +|||++. .+...+++++++.++++|.+
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d 72 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLND 72 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTC
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcC
Confidence 3577766321 123577878877754 6999755 44467889999999999965
No 75
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=95.79 E-value=0.01 Score=39.20 Aligned_cols=34 Identities=6% Similarity=-0.027 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
+..+.++ ++||||+++. | .+++++|+.++++|.+
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~ 35 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLND 35 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHC
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcC
Confidence 4556666 5799999887 3 7899999999999965
No 76
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=95.19 E-value=0.0027 Score=42.53 Aligned_cols=54 Identities=19% Similarity=0.270 Sum_probs=40.4
Q ss_pred CCC-CCCCceeeccC-----CCCCChHHHHHHHHHhcCCeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 13 RPG-PKPYPVIGNLL-----EPGGKPHKSLANLTKIHGRIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 13 ~p~-p~~~p~~g~~~-----~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
||| +.++|++|+.. .+..+++..+.++.++ ||++.. ...+++++++.+++|+.+
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d 95 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD 95 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC
Confidence 445 33578888653 2446788888888865 998764 357889999999999975
No 77
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=95.11 E-value=0.2 Score=33.80 Aligned_cols=41 Identities=5% Similarity=0.022 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHhcC-CeEEEecCCeeEEEecCHHHHHHHHHH
Q 036837 30 GKPHKSLANLTKIHG-RIMSLRLGLVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 30 ~~~~~~~~~~~~~~g-~i~~~~~~~~~~v~i~~p~~~~~il~~ 71 (122)
.+++..+..+.+..+ +++..-.++ ...+++..+.+++|+.+
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d 78 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSD 78 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcC
Confidence 456777777766543 455443333 34567899999999976
No 78
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=87.07 E-value=0.55 Score=30.91 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHHHhCCCCceeeHHHHH-HHHHHHHHHHHHhcCC
Q 036837 74 RRKKINDLLGYVEENCPAGKAIGFGQAA-FHTSLNLSSNTIFSNN 117 (122)
Q Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~ii~~~~fG~~ 117 (122)
+.+.++++++.+. | ++|+.+.+ ..+++|+|+. +||.+
T Consensus 97 i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~ 134 (367)
T 3b4x_A 97 VREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN 134 (367)
T ss_dssp HHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred HHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC
Confidence 3444445444442 3 59999765 7999999999 79987
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.92 E-value=3.2 Score=22.16 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=36.5
Q ss_pred ceeeccCCCCC--ChHHHHHHHHHhcC-CeEEEecCCeeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGG--KPHKSLANLTKIHG-RIMSLRLGLVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~--~~~~~~~~~~~~~g-~i~~~~~~~~~~v~i~~p~~~~~il~ 70 (122)
-+++|+..-.. .....+.+++.+|| +|..+ .+|.-+|...+.+.++..+.
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~ 64 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQK 64 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHH
Confidence 34788865422 22446889999995 99888 45888999999998877664
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=79.45 E-value=5.4 Score=21.30 Aligned_cols=58 Identities=21% Similarity=0.162 Sum_probs=40.1
Q ss_pred CCCCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC------CeeEEEecCHHHHHHHHHH
Q 036837 12 VRPGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG------LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 12 ~~p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~------~~~~v~i~~p~~~~~il~~ 71 (122)
.||.+...-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 45556666678887532 2345678888999999887652 2346777788888877764
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=71.28 E-value=8.5 Score=19.63 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=33.7
Q ss_pred CCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC----CeeEEEecCHHHHHH
Q 036837 14 PGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG----LVTTVVVSSPSMAKA 67 (122)
Q Consensus 14 p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~----~~~~v~i~~p~~~~~ 67 (122)
+.++..-++|++..- -.-+.+.++..+||+|..+++. |.-.|-..+++.++.
T Consensus 8 ~~~~~~l~V~~Lp~~--~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~ 63 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED--MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQS 63 (89)
T ss_dssp ---CCEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHH
Confidence 334455667887532 2345788889999999888865 344666678877663
No 82
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=69.23 E-value=8.7 Score=18.95 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=32.8
Q ss_pred eeeccCCCCCC----hHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 21 VIGNLLEPGGK----PHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 21 ~~g~~~~~~~~----~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
++|++..-..+ ..+.+.++..+||+|..+.+. +.-.|-..+++.++..+
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai 64 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAV 64 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHH
Confidence 56777543322 346788899999999888764 23356666888776654
No 83
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=66.26 E-value=10 Score=20.34 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCeEEEecCC-eeEEEecCHHHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGL-VTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~-~~~v~i~~p~~~~~il~~ 71 (122)
...+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 456788899999776666554 558889999999999853
No 84
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=58.68 E-value=21 Score=19.64 Aligned_cols=53 Identities=15% Similarity=0.033 Sum_probs=34.2
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
|...-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 45 ~~~~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~ 106 (129)
T 2kxn_B 45 PNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKE 106 (129)
T ss_dssp CSSCBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 3344567776532 2345688888999999877653 123566678887776663
No 85
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=51.71 E-value=24 Score=18.36 Aligned_cols=52 Identities=15% Similarity=0.123 Sum_probs=34.9
Q ss_pred CCceeeccCCCCCC----hHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGK----PHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~----~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
..-++|++..-... ..+.+.++..+||+|..+.+. +.-.|-..+++.++..+
T Consensus 16 ~~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai 78 (105)
T 2nlw_A 16 SVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAV 78 (105)
T ss_dssp SEEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHH
T ss_pred CEEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHH
Confidence 34567888754322 457788999999999888764 23355566777666554
No 86
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=51.21 E-value=23 Score=17.91 Aligned_cols=52 Identities=25% Similarity=0.181 Sum_probs=32.4
Q ss_pred CCceeeccCCCCC--ChHHHHHHHHHhcCCeEEEecC------CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGG--KPHKSLANLTKIHGRIMSLRLG------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~--~~~~~~~~~~~~~g~i~~~~~~------~~~~v~i~~p~~~~~il 69 (122)
..-++|++..-.. +....+.++..+||+|..+.+. +.-.|-..+++.+...+
T Consensus 9 ~~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~ 68 (97)
T 1nu4_A 9 HTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNAL 68 (97)
T ss_dssp SEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHH
Confidence 3456788754311 1223444889999999887654 33456667777776665
No 87
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=50.88 E-value=26 Score=18.51 Aligned_cols=57 Identities=7% Similarity=-0.006 Sum_probs=34.6
Q ss_pred CCCCCCceeeccCCC---CCChHHHHHHHHHhcCCeEEEecC----------CeeEEEecCHHHHHHHHH
Q 036837 14 PGPKPYPVIGNLLEP---GGKPHKSLANLTKIHGRIMSLRLG----------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 14 p~p~~~p~~g~~~~~---~~~~~~~~~~~~~~~g~i~~~~~~----------~~~~v~i~~p~~~~~il~ 70 (122)
+.|...-++.|+..- ..+..+.+.+.+.+||.|..+++. |.-.|-..+++.+.....
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~ 74 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVV 74 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHH
Confidence 345556677887632 234456788888999998877642 122455567777666553
No 88
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=50.67 E-value=27 Score=18.59 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=33.4
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..- -..+.+.+++.+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 18 ~l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~ 69 (115)
T 3beg_B 18 RVVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVR 69 (115)
T ss_dssp CEEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHH
Confidence 3467887633 1234677788899999887764 345666678887776653
No 89
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.77 E-value=23 Score=17.43 Aligned_cols=52 Identities=25% Similarity=0.208 Sum_probs=33.1
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
|...-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 4 ~~~~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 64 (85)
T 1x4e_A 4 GSSGLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV 64 (85)
T ss_dssp CCCEEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHH
Confidence 3344567776532 23456777888899988776421 2356667888777666
No 90
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.33 E-value=25 Score=17.68 Aligned_cols=53 Identities=15% Similarity=0.039 Sum_probs=33.9
Q ss_pred CCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC------C---eeEEEecCHHHHHHHH
Q 036837 15 GPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG------L---VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 15 ~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~------~---~~~v~i~~p~~~~~il 69 (122)
.|...-+++++..- -..+.+.++..+||+|..+.+. . .-.|-..+++.++.++
T Consensus 13 ~~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 74 (95)
T 2cqc_A 13 DPNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK 74 (95)
T ss_dssp CGGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHH
Confidence 33445567877532 2345688888999998777652 1 2245566888777665
No 91
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.16 E-value=33 Score=18.33 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=33.9
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
+...-++|++..- -.-+.+.+++.+||.|..+++. +.-.|-..+.+.+....
T Consensus 15 ~~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai 69 (105)
T 1sjq_A 15 PSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMV 69 (105)
T ss_dssp CCCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHH
Confidence 3445567887532 2345678899999999887754 33456666777666554
No 92
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.85 E-value=38 Score=18.56 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=33.4
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
|...-++|++..- -.-+.+.+++.+||.|..+.+. +.-.|-..+.+.+..++
T Consensus 30 ps~~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai 84 (119)
T 2ad9_A 30 PSRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMV 84 (119)
T ss_dssp CCSEEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHH
Confidence 3345677887642 2345688899999998877654 33455556776665544
No 93
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.74 E-value=33 Score=17.58 Aligned_cols=52 Identities=21% Similarity=0.106 Sum_probs=33.7
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
+...-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~ 72 (103)
T 2d9p_A 14 QVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAV 72 (103)
T ss_dssp SCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHH
Confidence 4445667887542 2345677888899998777654 12356666888777665
No 94
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.70 E-value=35 Score=17.81 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=34.4
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++.. .-..+.+.+++.+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 17 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~ 68 (108)
T 1x4c_A 17 RVVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVR 68 (108)
T ss_dssp EEEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHH
Confidence 356777753 23456788899999999877653 455666778887776653
No 95
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.61 E-value=36 Score=17.97 Aligned_cols=55 Identities=13% Similarity=0.028 Sum_probs=35.8
Q ss_pred CCCCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---eeEEEecCHHHHHHHH
Q 036837 14 PGPKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 14 p~p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---~~~v~i~~p~~~~~il 69 (122)
+.|...-++||+..- .-.-+.+.+++.+||.|..+++.. .-.|-..+.+.+..+.
T Consensus 12 ~~p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai 69 (102)
T 1x4d_A 12 VETRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAV 69 (102)
T ss_dssp CCCCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHH
Confidence 334555678887641 223456888999999998888653 2356666777666554
No 96
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=43.55 E-value=38 Score=18.28 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=36.3
Q ss_pred CCCCCCCceeeccCCCC----CCh----HHHHHHHHHhcCCeEEEecC-----CeeEEEecCHHHHHHHHHH
Q 036837 13 RPGPKPYPVIGNLLEPG----GKP----HKSLANLTKIHGRIMSLRLG-----LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 13 ~p~p~~~p~~g~~~~~~----~~~----~~~~~~~~~~~g~i~~~~~~-----~~~~v~i~~p~~~~~il~~ 71 (122)
+|.|...-.+.|+.... ... .+.+.+.+.+||.|..+.+. |.-.|-..+++.++.....
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~ 74 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 74 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence 56666666777876542 112 23456677899998877653 2335556677777666543
No 97
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=43.38 E-value=8.8 Score=20.68 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCeEEEecCC-eeEEEecCHHHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGL-VTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~-~~~v~i~~p~~~~~il~~ 71 (122)
...+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 346778888899776666654 558889999999999964
No 98
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=42.71 E-value=42 Score=18.47 Aligned_cols=52 Identities=19% Similarity=0.205 Sum_probs=33.0
Q ss_pred CceeeccCCCCC--ChHHHHHHHHHhcCCeEEEecC------CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGG--KPHKSLANLTKIHGRIMSLRLG------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~--~~~~~~~~~~~~~g~i~~~~~~------~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..-.. +....+.+++.+||+|..+.+. |.-.|-..+++.+...+.
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~ 90 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVE 90 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHH
Confidence 456788764311 1223466789999999877653 234666678887776664
No 99
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.32 E-value=37 Score=17.76 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=33.0
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--------CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--------~~~~v~i~~p~~~~~il 69 (122)
.-++|++..- -..+.+.++..+||+|..+.+. |.-.|...+++.++.++
T Consensus 13 ~lfV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai 69 (103)
T 1s79_A 13 SVYIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFV 69 (103)
T ss_dssp CEEEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHH
Confidence 3456776532 2345678888999999877653 23456667888887766
No 100
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=40.03 E-value=42 Score=17.76 Aligned_cols=52 Identities=17% Similarity=0.189 Sum_probs=35.2
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-----C----eeEEEecCHHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-----L----VTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-----~----~~~v~i~~p~~~~~il~~ 71 (122)
.--++|++..- -..+.+.+++.+||+|..+.+. + .-.|...+++.++..+..
T Consensus 7 ~~lfV~nL~~~--~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 7 KEVTFARLNDN--VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp CEEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34467777532 2356788889999999877642 1 235777799988888755
No 101
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.79 E-value=38 Score=17.16 Aligned_cols=50 Identities=12% Similarity=0.009 Sum_probs=33.5
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
+...-++|++ .-..+.+.++..+||+|..+.+. +.-.|-..+++.+...+
T Consensus 14 ~~~~l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai 66 (97)
T 1x5p_A 14 KGNTLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAV 66 (97)
T ss_dssp CCSEEEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred CCCEEEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHH
Confidence 3344567773 23456788899999999887764 33456666888777665
No 102
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.66 E-value=37 Score=16.99 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=33.5
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAILK 70 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il~ 70 (122)
...-+++++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++.
T Consensus 5 ~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (95)
T 2dnz_A 5 SSGLYVGSLHFN--ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 65 (95)
T ss_dssp CCEEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 334567776532 23456888889999988776532 23566678887776663
No 103
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=37.72 E-value=49 Score=17.85 Aligned_cols=47 Identities=13% Similarity=0.028 Sum_probs=30.9
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
.-++|++ .-..+.+.+++.+||+|..+.+. +.-.|-..+.+.+...+
T Consensus 41 ~lfVgnl----~~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai 90 (121)
T 2bz2_A 41 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAV 90 (121)
T ss_dssp EEEEECS----SCCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHH
Confidence 3456773 23356788899999988766654 33456666777776655
No 104
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=37.50 E-value=18 Score=23.48 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhcCCCCC
Q 036837 102 FHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 102 ~~~~~~ii~~~~fG~~~~~ 120 (122)
..+++|.||.-.||.|+++
T Consensus 47 ~e~ALn~iCtr~fG~DLdS 65 (324)
T 3trk_A 47 PEVALNEICTRMYGVDLDS 65 (324)
T ss_dssp HHHHHHHHHHHHHSSCGGG
T ss_pred HHHHHHHHHHHHhccccCc
Confidence 4579999999999999986
No 105
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=37.10 E-value=66 Score=19.10 Aligned_cols=54 Identities=22% Similarity=0.237 Sum_probs=36.4
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-----C----eeEEEecCHHHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-----L----VTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-----~----~~~v~i~~p~~~~~il~~ 71 (122)
|...-++|++..- ---+.+.+++.+||+|..+++. + .-.|-..+++.+...+..
T Consensus 14 p~~tlfVgnLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 14 PMASLYVGDLHPD--VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp -CCEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3344567887532 2345778889999999877642 1 236777799988888765
No 106
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.98 E-value=44 Score=17.08 Aligned_cols=53 Identities=15% Similarity=0.016 Sum_probs=34.0
Q ss_pred CCCCCceeeccCCCCCChHHHHHHHHHh-cCCeEEEecC--------CeeEEEecCHHHHHHHH
Q 036837 15 GPKPYPVIGNLLEPGGKPHKSLANLTKI-HGRIMSLRLG--------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 15 ~p~~~p~~g~~~~~~~~~~~~~~~~~~~-~g~i~~~~~~--------~~~~v~i~~p~~~~~il 69 (122)
.+...-++|++..- -..+.+.++..+ ||+|..+.+. +.-.|-..+++.+..++
T Consensus 7 ~~~~~l~V~nLp~~--~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~ 68 (104)
T 2dhg_A 7 GPEYSLFVGDLTPD--VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRAL 68 (104)
T ss_dssp SCCCCEEEECCCTT--CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHH
T ss_pred CCCcEEEEeCCCCC--CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHH
Confidence 34445567887642 234567888888 9998776652 12355666888777665
No 107
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.67 E-value=48 Score=17.45 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=33.4
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---eeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---VTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---~~~v~i~~p~~~~~il~ 70 (122)
-++|++.. .-..+.+.+++.+||+|..+.+.. .-.|-..+++.++..+.
T Consensus 13 l~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~ 64 (111)
T 1whx_A 13 ILAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFR 64 (111)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHH
Confidence 45677642 234567888999999998887642 34566678887776664
No 108
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=35.53 E-value=51 Score=17.41 Aligned_cols=50 Identities=20% Similarity=0.185 Sum_probs=34.4
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC-------eeEEEecCHHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL-------VTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-------~~~v~i~~p~~~~~il~~ 71 (122)
-++|++..- ---+.+.+++.+||+|..+++.. .-.|-..+++.++..+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 467887542 23457888899999988766431 236677799988887754
No 109
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=35.15 E-value=54 Score=17.53 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=33.6
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcC-CeEEEecC-----CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHG-RIMSLRLG-----LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g-~i~~~~~~-----~~~~v~i~~p~~~~~il~ 70 (122)
.-++||+.. .-..+.+.++..+|| .|..+.+. +.-.|-..+.+.++..+.
T Consensus 30 ~l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~ 85 (111)
T 2jvr_A 30 RITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALE 85 (111)
T ss_dssp EEEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHH
Confidence 456787753 234567888999999 78776653 334666678887776653
No 110
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=34.66 E-value=44 Score=16.33 Aligned_cols=49 Identities=18% Similarity=0.101 Sum_probs=31.4
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
.-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 8 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 65 (87)
T 3bs9_A 8 HVFVGDLSPE--ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 65 (87)
T ss_dssp EEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHH
Confidence 3456776532 23456888889999987766421 2245566888777665
No 111
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=34.35 E-value=49 Score=16.82 Aligned_cols=47 Identities=19% Similarity=0.223 Sum_probs=30.4
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecC----CeeEEEecCHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG----LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~----~~~~v~i~~p~~~~~il 69 (122)
++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 4 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~ 54 (101)
T 2hvz_A 4 YVGNLGT--GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 54 (101)
T ss_dssp EEECCCS--SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHH
Confidence 3555543 22345678888999998776643 33466667888777665
No 112
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=34.10 E-value=63 Score=18.03 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=31.4
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecCCe-----eEEEecCHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGLV-----TTVVVSSPSMAKAIL 69 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~-----~~v~i~~p~~~~~il 69 (122)
++||+.. .--.+.+.+++.+||.|..+.+... -.|-..+++.++...
T Consensus 32 ~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai 83 (130)
T 3zzy_A 32 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK 83 (130)
T ss_dssp EEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHH
Confidence 4688742 2234568889999999887765432 456667877776655
No 113
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=34.07 E-value=51 Score=16.91 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=31.3
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+.+.++.++
T Consensus 26 l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 82 (106)
T 1p27_B 26 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAM 82 (106)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHH
Confidence 456776532 2345688889999998877652 12345566877776665
No 114
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=33.80 E-value=42 Score=15.85 Aligned_cols=37 Identities=14% Similarity=0.213 Sum_probs=25.1
Q ss_pred HHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
.+.+.++..+||++..+.+.. .-.|-..+++.++.++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai 58 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIM 58 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHH
Confidence 456788888999988776531 2345566777776655
No 115
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=33.46 E-value=52 Score=16.85 Aligned_cols=51 Identities=10% Similarity=0.043 Sum_probs=34.5
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il~ 70 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 12 ~~l~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~ 63 (103)
T 2dgu_A 12 KVLFVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAME 63 (103)
T ss_dssp CCEEEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHH
Confidence 34567777532 2346788888999999888754 334666678887776663
No 116
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=32.95 E-value=55 Score=16.95 Aligned_cols=49 Identities=14% Similarity=0.062 Sum_probs=33.0
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 29 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 29 LFVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 456776532 2345688888999999888764 233566678887776653
No 117
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.89 E-value=49 Score=16.39 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=34.9
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC-eeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL-VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~~v~i~~p~~~~~il 69 (122)
+...-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 8 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~ 60 (90)
T 2dnp_A 8 NTWKIFVGNVSAA--CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAI 60 (90)
T ss_dssp CSCCEEEESCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHH
Confidence 3344567887542 23456788889999998887653 3456667888777665
No 118
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=32.80 E-value=49 Score=16.38 Aligned_cols=49 Identities=18% Similarity=0.110 Sum_probs=31.3
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
.-++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 10 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~ 65 (92)
T 2dgv_A 10 QIFVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERAC 65 (92)
T ss_dssp EEEECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHH
Confidence 345677653 22356788888999998776543 12345556777776665
No 119
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.39 E-value=62 Score=17.44 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=33.5
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
|...-++||+..- .-.-+.+.+++.+||.|..+++. +.-.|-..+.+.+...+
T Consensus 24 p~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai 79 (112)
T 1x4f_A 24 LGRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMV 79 (112)
T ss_dssp CCCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHH
T ss_pred CCCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHH
Confidence 3445677887642 02335678888999998887754 23455556777665554
No 120
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=32.02 E-value=56 Score=16.80 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=31.3
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-----Ce----eEEEecCHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-----LV----TTVVVSSPSMAKAIL 69 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-----~~----~~v~i~~p~~~~~il 69 (122)
-++||+..- -..+.+.++..+||+|..+.+. +. -.|-..+++.++..+
T Consensus 22 lfV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai 78 (99)
T 4fxv_A 22 LIVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHH
Confidence 467777532 2345788888999999877642 11 245566888777665
No 121
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.66 E-value=59 Score=16.96 Aligned_cols=52 Identities=12% Similarity=0.113 Sum_probs=33.7
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
|...-++|++.. .-..+.+.+++.+||.|..+.+. +.-.|-..+.+.+...+
T Consensus 14 p~~~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai 68 (101)
T 2cq1_A 14 PSRVLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMV 68 (101)
T ss_dssp CCSEEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHH
Confidence 334567788763 22345678888999999877653 33456666777666554
No 122
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.60 E-value=53 Score=16.34 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=34.1
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
...-+++++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 16 ~~~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 75 (94)
T 2e5h_A 16 KSTVYVSNLPFS--LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCT 75 (94)
T ss_dssp TTSEEEESCCTT--SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHH
Confidence 345567877532 23456788889999998877532 2356677888777665
No 123
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=31.53 E-value=81 Score=18.45 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=32.4
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecC-----CeeEEEecCHHHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-----LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-----~~~~v~i~~p~~~~~il~~ 71 (122)
++||+.. .-..+.+.+++.+||+|..+++. +.-.|-..|.+.++.....
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 3677642 22345788899999998877753 1346666788877766643
No 124
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=31.13 E-value=62 Score=16.99 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=33.0
Q ss_pred CCCceeeccCCC--CCC------hHHHHHHHHHhcCCeEEEecC-----------CeeEEEecCHHHHHHHHH
Q 036837 17 KPYPVIGNLLEP--GGK------PHKSLANLTKIHGRIMSLRLG-----------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 17 ~~~p~~g~~~~~--~~~------~~~~~~~~~~~~g~i~~~~~~-----------~~~~v~i~~p~~~~~il~ 70 (122)
...-++.|+..- ..+ ..+.+.+.+.+||+|..+.+. +.-.|-..+++.++....
T Consensus 5 s~vl~L~Nm~~~~~l~~d~~~~~~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~ 77 (105)
T 3v4m_A 5 TEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQ 77 (105)
T ss_dssp CSEEEEESSCCGGGSSSHHHHHHHHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHH
T ss_pred CeEEEEECCCCHHHccChHHHHHHHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHH
Confidence 344556676443 111 234567788899999888764 223566668877766653
No 125
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=30.49 E-value=26 Score=22.91 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHhcCCCCC
Q 036837 101 AFHTSLNLSSNTIFSNNLVD 120 (122)
Q Consensus 101 ~~~~~~~ii~~~~fG~~~~~ 120 (122)
...+++|.||.-.||.|+++
T Consensus 44 S~e~aLn~ictr~~G~DldS 63 (320)
T 2hwk_A 44 SAEIVLNQLCVRFFGLDLDS 63 (320)
T ss_dssp CHHHHHHHHHHHHHSCCGGG
T ss_pred CHHHHHHHHHHHhhccccCc
Confidence 35689999999999999986
No 126
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=30.35 E-value=91 Score=18.71 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=36.2
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC----CeeEEEecCHHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG----LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~----~~~~v~i~~p~~~~~il~~ 71 (122)
.-++|++... .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 36 ~l~V~nLp~~-~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~ 91 (229)
T 2adc_A 36 VLLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSH 91 (229)
T ss_dssp EEEEESCCTT-TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 3457777541 12346778888999999887765 3356777899988888754
No 127
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=30.24 E-value=60 Score=16.54 Aligned_cols=51 Identities=18% Similarity=0.258 Sum_probs=33.7
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..- .-..+.+.++..+||+|..+.+. +.-.|-..+.+.++.++.
T Consensus 24 ~l~V~nLp~~-~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~ 75 (97)
T 2xnq_A 24 RLFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIE 75 (97)
T ss_dssp EEEEESCCSS-CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHH
Confidence 3456776520 22345688889999999887764 344666678887776653
No 128
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=30.11 E-value=67 Score=17.10 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=33.8
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..- -..+.+.+++.+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 24 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 82 (126)
T 3ex7_B 24 ILFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAME 82 (126)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHH
Confidence 3466776532 2345678888999999888763 233666778888877764
No 129
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=29.94 E-value=71 Score=17.30 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=35.0
Q ss_pred CCCCceeeccCCC---CCChHHHHHHHHHhcCCeEEEecCC-------------eeEEEecCHHHHHHHHH
Q 036837 16 PKPYPVIGNLLEP---GGKPHKSLANLTKIHGRIMSLRLGL-------------VTTVVVSSPSMAKAILK 70 (122)
Q Consensus 16 p~~~p~~g~~~~~---~~~~~~~~~~~~~~~g~i~~~~~~~-------------~~~v~i~~p~~~~~il~ 70 (122)
|...-++.|+..- ..+..+.+.+.+.+||+|..+++.. .-.|-..+++.+.....
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~ 89 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQ 89 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHH
Confidence 3445667787543 3455677888889999998776432 12344557877766553
No 130
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.84 E-value=59 Score=16.37 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=33.0
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
.-+++++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 67 (99)
T 1whw_A 10 RLFVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 67 (99)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHH
Confidence 4456776532 23456888889999998887632 2356667888777666
No 131
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=29.78 E-value=59 Score=16.33 Aligned_cols=49 Identities=8% Similarity=0.173 Sum_probs=32.2
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 5 l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 5 VYLGSIPYD--QTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 356766432 2345678888999999887763 223566678887776663
No 132
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=29.64 E-value=68 Score=17.01 Aligned_cols=50 Identities=26% Similarity=0.221 Sum_probs=32.8
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--------CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--------~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+.+.++.++.
T Consensus 9 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~ 66 (116)
T 2fy1_A 9 KLFIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66 (116)
T ss_dssp EEEEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHH
Confidence 4456776532 2355688888999998776543 233566678887776664
No 133
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.58 E-value=61 Score=16.49 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=33.0
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 16 ~~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~ 72 (103)
T 2cq3_A 16 KRLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAR 72 (103)
T ss_dssp CEEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHH
Confidence 34567777532 2345678888999999877653 23456667888777665
No 134
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=29.46 E-value=1.4e+02 Score=20.44 Aligned_cols=51 Identities=8% Similarity=0.002 Sum_probs=32.8
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
..-++||+..- -....+..++.+||.|..+.+. +.-+|...+++.+..++.
T Consensus 103 ~~lfV~nL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~ 162 (437)
T 3pgw_S 103 KTLFVARVNYD--TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYK 162 (437)
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHH
Confidence 34567776532 2345678888999999877653 123555667777766663
No 135
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.45 E-value=58 Score=16.18 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=33.6
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC-eeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL-VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~-~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.+...+
T Consensus 11 ~~l~V~nLp~~--~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~ 61 (92)
T 2dgt_A 11 TKLHVGNISPT--CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAI 61 (92)
T ss_dssp EEEEEESCCSS--CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHH
Confidence 34567877532 23567888899999998877553 3455566877777665
No 136
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=29.13 E-value=59 Score=16.17 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=32.2
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC--------eeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL--------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~--------~~~v~i~~p~~~~~il 69 (122)
..-+++++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 17 ~~l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~ 74 (95)
T 2ywk_A 17 RTVFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAI 74 (95)
T ss_dssp GEEEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHH
T ss_pred CEEEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHH
Confidence 34466776532 23456888899999988776532 2355566777776665
No 137
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.93 E-value=58 Score=16.01 Aligned_cols=47 Identities=13% Similarity=0.161 Sum_probs=30.5
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC----eeEEEecCHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL----VTTVVVSSPSMAKA 67 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~----~~~v~i~~p~~~~~ 67 (122)
.-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+.+.++.
T Consensus 7 ~l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~ 57 (88)
T 1wf0_A 7 GVFVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 57 (88)
T ss_dssp EEEEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHH
Confidence 3456776532 23456788889999998887642 33566667776653
No 138
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.86 E-value=59 Score=16.07 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=33.3
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 9 ~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~ 59 (90)
T 2dnq_A 9 VKLFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAI 59 (90)
T ss_dssp EEEEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHH
T ss_pred eEEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHH
Confidence 34456776532 2345688889999998877643 34466667887777665
No 139
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=28.23 E-value=86 Score=17.76 Aligned_cols=49 Identities=14% Similarity=0.060 Sum_probs=32.2
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
-++|++.. .-....+..++.+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 75 l~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 132 (165)
T 1rk8_A 75 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 132 (165)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHH
Confidence 56677653 22456788899999998776653 123555668777776653
No 140
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=28.10 E-value=70 Score=16.68 Aligned_cols=49 Identities=24% Similarity=0.196 Sum_probs=31.8
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
.-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 28 ~l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai 85 (108)
T 2jrs_A 28 RLYVGSLHFN--ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 85 (108)
T ss_dssp EEEEECCCSS--CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHH
Confidence 3456776532 2345678888999998776643 12356667888777665
No 141
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.99 E-value=66 Score=16.36 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=33.1
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 14 ~~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 72 (103)
T 2dnm_A 14 ITLKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAE 72 (103)
T ss_dssp CEEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHH
T ss_pred eEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHH
Confidence 34567877533 23456788889999998877641 2356666777776665
No 142
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.98 E-value=71 Score=16.66 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=31.0
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
-++|++..- -..+.+.+++.+||.|..+.+. +.-.|-..+.+.++.++
T Consensus 28 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 28 VFCMQLAAR--IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 356776432 2345678888999999887764 12355566777776655
No 143
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.95 E-value=66 Score=16.33 Aligned_cols=51 Identities=18% Similarity=0.189 Sum_probs=32.5
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~~ 71 (122)
.-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 10 ~l~V~nlp~~--~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 10 SVFVGNIPYE--ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp CEEEESCCTT--SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEEEeCCCCc--CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3456776532 2345678888999988766543 1235566688888777753
No 144
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=27.77 E-value=59 Score=15.71 Aligned_cols=51 Identities=24% Similarity=0.201 Sum_probs=33.6
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
...-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++..+
T Consensus 7 ~~~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 66 (85)
T 3mdf_A 7 KRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAI 66 (85)
T ss_dssp SSEEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHH
Confidence 344567777532 23467788889999998877521 2356666888777665
No 145
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.28 E-value=77 Score=16.56 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCCeEEEecCC----eeEEEecCHHHHHHHH
Q 036837 33 HKSLANLTKIHGRIMSLRLGL----VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 33 ~~~~~~~~~~~g~i~~~~~~~----~~~v~i~~p~~~~~il 69 (122)
.+.+.+++.+||+|..+.+.+ .-.|-..+++.+...+
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai 71 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAV 71 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHH
Confidence 567889999999998877642 3356666887776655
No 146
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=25.99 E-value=74 Score=16.21 Aligned_cols=50 Identities=20% Similarity=0.138 Sum_probs=32.2
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC--------eeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL--------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~--------~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 16 ~~l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai 73 (105)
T 2dnh_A 16 RKLFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAI 73 (105)
T ss_dssp CEEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHH
Confidence 44567887532 23456888889999988776432 2345566777776655
No 147
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.87 E-value=72 Score=16.09 Aligned_cols=50 Identities=24% Similarity=0.216 Sum_probs=32.6
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--------CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--------~~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 18 ~~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~ 75 (100)
T 2do4_A 18 HKLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAV 75 (100)
T ss_dssp SCEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHH
Confidence 44567776532 2345688888999998777653 12356666888777665
No 148
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=25.56 E-value=65 Score=15.46 Aligned_cols=47 Identities=19% Similarity=0.082 Sum_probs=29.3
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 5 ~V~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~ 60 (83)
T 3md1_A 5 FVGDLNVN--VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM 60 (83)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHH
Confidence 35555422 2345677888899998776542 12356666888777665
No 149
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=24.90 E-value=52 Score=18.10 Aligned_cols=17 Identities=24% Similarity=0.514 Sum_probs=14.0
Q ss_pred HHHHHHHhcCCeEEEec
Q 036837 35 SLANLTKIHGRIMSLRL 51 (122)
Q Consensus 35 ~~~~~~~~~g~i~~~~~ 51 (122)
..+++..+||.++++.+
T Consensus 9 ~~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 9 NTDELKQKYGRVYEIRI 25 (114)
T ss_dssp CHHHHHHHHSSEEEEEE
T ss_pred cHHHHHHHhCceEEEEe
Confidence 34678899999999877
No 150
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.86 E-value=77 Score=16.03 Aligned_cols=51 Identities=24% Similarity=0.201 Sum_probs=32.8
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
...-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 12 ~~~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 71 (102)
T 2cqb_A 12 KRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAI 71 (102)
T ss_dssp CSCEEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHH
Confidence 345567887542 23567888889999987776532 2345556777776665
No 151
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=24.84 E-value=78 Score=16.14 Aligned_cols=51 Identities=22% Similarity=0.191 Sum_probs=32.9
Q ss_pred CceeeccCCCC----CChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPG----GKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
.-++|+++... .-..+.+.++..+||+|..+++. +.-.|-..+++.++..+
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai 71 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKII 71 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHH
Confidence 34567776432 11234677888999999888764 22356666887777665
No 152
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=24.80 E-value=76 Score=15.99 Aligned_cols=50 Identities=28% Similarity=0.206 Sum_probs=30.4
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEE--------EecC---------CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMS--------LRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~--------~~~~---------~~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||.|.. +.+. +.-.|-..+.+.++..+
T Consensus 14 ~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai 80 (99)
T 2la6_A 14 NTIFVQGLGEN--VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 80 (99)
T ss_dssp SEEEEECCCSS--CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHH
Confidence 34567777532 235677888899998765 4331 12245556777766655
No 153
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.39 E-value=80 Score=16.07 Aligned_cols=51 Identities=20% Similarity=0.087 Sum_probs=34.2
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAILK 70 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il~ 70 (122)
..-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++.
T Consensus 16 ~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 75 (105)
T 1x5u_A 16 ATVYVGGLDEK--VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 75 (105)
T ss_dssp TEEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHH
Confidence 34567877532 23456888899999998877543 23566678887776663
No 154
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.25 E-value=82 Score=16.18 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=33.7
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il 69 (122)
...-++|++..- -..+.+.+++.+||+|..+.+. +.-.|-..+.+.+..++
T Consensus 15 ~~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~ 74 (111)
T 1x4h_A 15 GKTVFIRNLSFD--SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCL 74 (111)
T ss_dssp CCCEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHH
Confidence 345567887532 2345678888999999887764 12356666887776665
No 155
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.19 E-value=87 Score=16.41 Aligned_cols=38 Identities=16% Similarity=0.048 Sum_probs=25.5
Q ss_pred ChHHHHHHHHHhcCCeEEEecCC-eeEEEecCHHHHHHH
Q 036837 31 KPHKSLANLTKIHGRIMSLRLGL-VTTVVVSSPSMAKAI 68 (122)
Q Consensus 31 ~~~~~~~~~~~~~g~i~~~~~~~-~~~v~i~~p~~~~~i 68 (122)
+....+.....+||.+..+++.. +-+|-..|.+.+..+
T Consensus 27 ~l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaA 65 (91)
T 2dnr_A 27 ALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNV 65 (91)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHG
T ss_pred HHHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHH
Confidence 34456777778899999888554 446666677665543
No 156
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=24.02 E-value=82 Score=16.08 Aligned_cols=49 Identities=12% Similarity=0.030 Sum_probs=31.2
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC--------CeeEEEecCHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG--------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~--------~~~~v~i~~p~~~~~il 69 (122)
.-+++++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 31 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~ 87 (107)
T 3ulh_A 31 KLLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAM 87 (107)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHH
Confidence 4556776532 2345678888899998776543 12355566887777665
No 157
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=24.02 E-value=79 Score=15.88 Aligned_cols=51 Identities=18% Similarity=0.258 Sum_probs=34.2
Q ss_pred CceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-CeeEEEecCHHHHHHHHH
Q 036837 19 YPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 19 ~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-~~~~v~i~~p~~~~~il~ 70 (122)
.-++|++..- .-..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 12 ~l~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~ 63 (96)
T 2kvi_A 12 RLFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIE 63 (96)
T ss_dssp EEEEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHH
Confidence 4467877530 22345678888999998877653 445666778888777664
No 158
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=23.72 E-value=89 Score=17.05 Aligned_cols=16 Identities=31% Similarity=0.561 Sum_probs=13.8
Q ss_pred EEEecCHHHHHHHHHH
Q 036837 56 TVVVSSPSMAKAILKN 71 (122)
Q Consensus 56 ~v~i~~p~~~~~il~~ 71 (122)
.++.+||+.+++|..+
T Consensus 6 vvfssdpeilkeivre 21 (162)
T 2l82_A 6 VVFSSDPEILKEIVRE 21 (162)
T ss_dssp EEEESCHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHH
Confidence 5778899999999877
No 159
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=23.66 E-value=1.2e+02 Score=17.98 Aligned_cols=53 Identities=9% Similarity=0.092 Sum_probs=36.9
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC----CeeEEEecCHHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG----LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~----~~~~v~i~~p~~~~~il~~ 71 (122)
..-++||+... .--.+.+.++..+||+|..+++. +.-.|-..+++.++..+..
T Consensus 5 ~~l~V~nL~~~-~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~~ 61 (205)
T 3tyt_A 5 PVLMVYGLDQS-KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITH 61 (205)
T ss_dssp SEEEEECCCTT-TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCcc-cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 34567887521 11245688889999999988764 3457777899988887754
No 160
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=23.52 E-value=96 Score=16.69 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=32.4
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~ 70 (122)
-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 66 l~v~nlp~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 123 (140)
T 2ku7_A 66 LYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 123 (140)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCC--CCHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 345665432 2346788889999999887763 223566678888777663
No 161
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=23.17 E-value=70 Score=15.00 Aligned_cols=46 Identities=13% Similarity=0.199 Sum_probs=28.5
Q ss_pred eeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 22 IGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 22 ~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
+|++.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 4 v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~ 58 (75)
T 2mss_A 4 VGGLSV--NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC 58 (75)
T ss_dssp EECCCS--SCCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHH
T ss_pred EecCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHH
Confidence 455542 223456788889999988776532 2345556777776554
No 162
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.07 E-value=90 Score=16.21 Aligned_cols=48 Identities=13% Similarity=0.059 Sum_probs=30.2
Q ss_pred ceeeccCCCCCChHHHHHHHHHhcCCeEEEecC-------CeeEEEecCHHHHHHHH
Q 036837 20 PVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG-------LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 20 p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~-------~~~~v~i~~p~~~~~il 69 (122)
-++|++.. .-..+.+.+++.+||+|..+.+. +.-.|-..+.+.++.++
T Consensus 32 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai 86 (109)
T 2err_A 32 LHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAR 86 (109)
T ss_dssp EEEESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHH
T ss_pred EEEECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHH
Confidence 34566543 22345678888999988776653 23355566777666555
No 163
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.74 E-value=92 Score=16.20 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=31.2
Q ss_pred CCCceeeccCCCCCChHHHHH---HHHHhcCCeEEEecCC------------eeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLA---NLTKIHGRIMSLRLGL------------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~---~~~~~~g~i~~~~~~~------------~~~v~i~~p~~~~~il 69 (122)
...-++|++..-.. .+.+. ++..+||+|..+.+.. .-.|-..+++.++..+
T Consensus 15 ~~~l~V~nLp~~~~--~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai 80 (111)
T 2cpi_A 15 KNLVFVVGLSQRLA--DPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAI 80 (111)
T ss_dssp SSCEEEEEECTTTC--CHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCCCCC--HHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHH
Confidence 34456788764321 23455 7788999988766431 2345566887776665
No 164
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.66 E-value=1e+02 Score=16.68 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=33.2
Q ss_pred CCCCcee--eccCCCCCChHHHHHHHHHhcCCeEEEecCC---eeEEEecCHHHHHHHH
Q 036837 16 PKPYPVI--GNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~--g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---~~~v~i~~p~~~~~il 69 (122)
|...-++ |++.. .-.-+.+.+.+.+||.|..+.+.. .-.|-..+++.++..+
T Consensus 24 pt~~L~V~Ng~L~~--~~te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai 80 (114)
T 2cq2_A 24 ATQSLVVANGGLGN--GVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAY 80 (114)
T ss_dssp CCSEEEEETCTGGG--TCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHH
Confidence 3444566 55542 223467889999999998877643 2356666777776655
No 165
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.57 E-value=85 Score=15.70 Aligned_cols=51 Identities=24% Similarity=0.154 Sum_probs=32.8
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC------------CeeEEEecCHHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG------------LVTTVVVSSPSMAKAILK 70 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~------------~~~~v~i~~p~~~~~il~ 70 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 6 ~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~ 68 (98)
T 2cpf_A 6 SGLFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALK 68 (98)
T ss_dssp CCEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHH
Confidence 34467776532 2345678888999998776643 123556668887777663
No 166
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=22.29 E-value=90 Score=15.89 Aligned_cols=50 Identities=18% Similarity=0.107 Sum_probs=32.7
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++
T Consensus 14 ~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~ 72 (106)
T 2dgp_A 14 IKLFIGQIPRN--LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQ 72 (106)
T ss_dssp EEEEEESCCTT--CCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHH
Confidence 34567777532 23457888889999988877542 2355566777776655
No 167
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=22.16 E-value=1.3e+02 Score=17.54 Aligned_cols=49 Identities=16% Similarity=0.199 Sum_probs=34.6
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecC---------CeeEEEecCHHHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---------LVTTVVVSSPSMAKAILKN 71 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---------~~~~v~i~~p~~~~~il~~ 71 (122)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+.+.++..+..
T Consensus 32 ~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 32 YVGSIYYE--LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 56666432 2345788889999999887763 2346777899999888864
No 168
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.86 E-value=98 Score=16.17 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=33.2
Q ss_pred CCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 17 KPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 17 ~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
...-++|++..- -..+.+.+++.+||.|..+.+. +.-.|-..+.+.+...+
T Consensus 15 ~~~l~V~nLp~~--~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai 68 (104)
T 1wex_A 15 SPVVHVRGLCES--VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECV 68 (104)
T ss_dssp CSEEEEESCCSS--CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHH
Confidence 345677887532 2345788899999999887653 23455556777666554
No 169
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=21.75 E-value=1e+02 Score=16.25 Aligned_cols=52 Identities=15% Similarity=0.053 Sum_probs=34.3
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
|...-++||+..- -.-+.+.++..+||.|..+.+. +.-.|-..+.+.++...
T Consensus 20 ps~~l~V~NLp~~--~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av 74 (100)
T 3r27_A 20 ASPVVHIRGLIDG--VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAV 74 (100)
T ss_dssp CCSEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHH
Confidence 4455677887632 2345678899999999877653 34456666777666554
No 170
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=21.45 E-value=99 Score=16.07 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=31.7
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
.|-++||+..-. --+.+.+++.+||+|..+++. |.-.|-..+++.+....
T Consensus 8 ~wL~VgNL~~~~--te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai 60 (89)
T 2wbr_A 8 SWLLLKNLTAQI--DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQ 60 (89)
T ss_dssp CEEEEECCCTTC--CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHH
T ss_pred ceEEEeCCCccC--CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHH
Confidence 455678875321 235788999999999887743 23355555665555443
No 171
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=21.43 E-value=1e+02 Score=16.26 Aligned_cols=47 Identities=13% Similarity=0.103 Sum_probs=29.7
Q ss_pred eeeccCCCCCChHHHHHHHHHhcCCeEEEecCC---------eeEEEecCHHHHHHHH
Q 036837 21 VIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 21 ~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
++|++..- -..+.+.+++.+||+|..+.+.. .-.|-..+.+.++..+
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 45665432 23556788889999987766421 2256666777776655
No 172
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.38 E-value=92 Score=15.66 Aligned_cols=50 Identities=12% Similarity=0.118 Sum_probs=31.9
Q ss_pred CCceeeccCCCCCChHHHHHHHHHhcCCeEEEecC---CeeEEEecCHHHHHHHH
Q 036837 18 PYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLG---LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 18 ~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~---~~~~v~i~~p~~~~~il 69 (122)
..-++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++
T Consensus 16 ~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~ 68 (99)
T 2cpj_A 16 SRLFVGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAK 68 (99)
T ss_dssp TEEEEESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHH
Confidence 34567877532 2345678888999998777654 23355556777666555
No 173
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=20.54 E-value=51 Score=12.36 Aligned_cols=10 Identities=40% Similarity=0.627 Sum_probs=6.3
Q ss_pred cCHHHHHHHH
Q 036837 60 SSPSMAKAIL 69 (122)
Q Consensus 60 ~~p~~~~~il 69 (122)
++|++++..+
T Consensus 12 sspellrrcl 21 (26)
T 2plx_B 12 SSPELLRRCL 21 (26)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 4677766655
No 174
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.37 E-value=1e+02 Score=15.70 Aligned_cols=51 Identities=18% Similarity=0.134 Sum_probs=32.7
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeEEEecCC----------eeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIMSLRLGL----------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~----------~~~v~i~~p~~~~~il 69 (122)
|...-++|++..- -..+.+.++..+|| |..+.+.. .-.|-..+++.++.++
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~ 74 (104)
T 1wi8_A 14 PPYTAFLGNLPYD--VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL 74 (104)
T ss_dssp SCEEEEEESCCSS--CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCCc--CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHH
Confidence 3444567877532 23456788888999 88777531 2356667888777665
No 175
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.36 E-value=1.1e+02 Score=16.01 Aligned_cols=56 Identities=21% Similarity=0.188 Sum_probs=33.1
Q ss_pred CCCCCCceeeccCCCCC---C------hHHHHHHHHHhcCCeEEEecC-----CeeEEEecCHHHHHHHH
Q 036837 14 PGPKPYPVIGNLLEPGG---K------PHKSLANLTKIHGRIMSLRLG-----LVTTVVVSSPSMAKAIL 69 (122)
Q Consensus 14 p~p~~~p~~g~~~~~~~---~------~~~~~~~~~~~~g~i~~~~~~-----~~~~v~i~~p~~~~~il 69 (122)
|.|...-++.|+..-.. + .-+.+.+.+.+||+|..+.+. +.-.|-..+++.+...+
T Consensus 12 ~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai 81 (112)
T 2dit_A 12 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCI 81 (112)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHH
T ss_pred CCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHH
Confidence 34455566777743211 1 124677788899988776542 33355556777666555
No 176
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.31 E-value=97 Score=15.51 Aligned_cols=52 Identities=13% Similarity=0.059 Sum_probs=32.5
Q ss_pred CCCCceeeccCCCCCChHHHHHHHHHhcCCeE-EEecCC---------eeEEEecCHHHHHHHH
Q 036837 16 PKPYPVIGNLLEPGGKPHKSLANLTKIHGRIM-SLRLGL---------VTTVVVSSPSMAKAIL 69 (122)
Q Consensus 16 p~~~p~~g~~~~~~~~~~~~~~~~~~~~g~i~-~~~~~~---------~~~v~i~~p~~~~~il 69 (122)
+...-++|++..- -..+.+.++..+||+|. .+.+.. .-.|-..+++.++.++
T Consensus 8 ~~~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 69 (99)
T 2div_A 8 MAASLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 69 (99)
T ss_dssp SSSEEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHH
T ss_pred CccEEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHH
Confidence 3344567877532 23456788889999987 665421 2245556887776665
Done!