BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036840
(327 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556101|ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541748|gb|EEF43296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1157
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/311 (67%), Positives = 250/311 (80%), Gaps = 4/311 (1%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGVARN+AECMSKLG+KPYMISALG DMAGN+LLEHW SAGLSTEGI++ + I T
Sbjct: 73 VQYALGGVARNIAECMSKLGTKPYMISALGNDMAGNLLLEHWNSAGLSTEGIQKHQKIRT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
AV+SNI D +GE+AA VA VE++EKFLTP+WI Q ISSASVL+VDANL+PPAL ASC
Sbjct: 133 AVISNIFDAHGEVAAGVADVEAVEKFLTPEWILQCKCKISSASVLLVDANLTPPALEASC 192
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN- 179
++AAE NIPVWFEPVSV KS RI S+V +T SPNEDEL+AMANALS ++F PIDR+
Sbjct: 193 QVAAEYNIPVWFEPVSVAKSTRIASIVSDVTFASPNEDELIAMANALSCASIFHPIDRDS 252
Query: 180 --KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237
K+S ESLFQ LKPAILVLLEKGI+ V +TLG++GV LCS E + R L +TK YG+
Sbjct: 253 SKKYSTESLFQMLKPAILVLLEKGIKTVAVTLGANGVFLCSTE-PNFTRTRLERTKKYGY 311
Query: 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+ LY + S C SS++S A++ G S AVHFP LPASVVRLTGAGDCLVGGTLAS+
Sbjct: 312 NGSLYDIIESSCPSSKFSDALQTQGSSHLLAVHFPTLPASVVRLTGAGDCLVGGTLASLC 371
Query: 298 SGLDVMQSVAV 308
SGLD+MQS+AV
Sbjct: 372 SGLDIMQSMAV 382
>gi|356576339|ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
Length = 390
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/355 (61%), Positives = 257/355 (72%), Gaps = 28/355 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V YV GGVARNVAECMSKLG+KPYMISALG DMAGN+LL WKSAGLS EGI + KDI+T
Sbjct: 36 VYYVQGGVARNVAECMSKLGAKPYMISALGFDMAGNLLLNQWKSAGLSIEGILKDKDIET 95
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VV NI DVNGE+AA VASVE+ EK+LTPDWI +F + + SA VLMVDANLS P+L A+C
Sbjct: 96 PVVCNIFDVNGEVAAGVASVEAFEKYLTPDWIFRFKNTLLSAPVLMVDANLSHPSLEAAC 155
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K+A + PVWFEPVSVTKSRRI+S+V+Y+T SPNEDEL+AMANALSG + F P+ ++
Sbjct: 156 KMAIDMECPVWFEPVSVTKSRRISSIVEYVTFASPNEDELIAMANALSGSDEFHPLKESQ 215
Query: 181 H---SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237
S SLFQ LKPAI VLLEKGI++V++T GS+GV LC+K ++ KT GF
Sbjct: 216 KKNISVLSLFQMLKPAIWVLLEKGIKVVLVTFGSNGVFLCNKGWPRQFKMPAEKTNQCGF 275
Query: 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
L+KTV +C SRYSG E S FAVHFP+LPASVVRLTGAGDCLVGGTL SI
Sbjct: 276 RGQLFKTVMQKCPPSRYSGFSELDRSSHLFAVHFPSLPASVVRLTGAGDCLVGGTLTSIC 335
Query: 298 SGLDVMQSVAV-------------------------DDAKTVYAAANVLFYQSML 327
+GLD+MQSV+V DDAK+VY+ A VLF QSML
Sbjct: 336 AGLDIMQSVSVGIAVAKAVVEVEANVPSTFSLSAITDDAKSVYSGAKVLFPQSML 390
>gi|225427804|ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
gi|297744710|emb|CBI37972.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 260/356 (73%), Gaps = 29/356 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+YV GGVARN+AECMSKLG+KPYMISALGLDMAGN+LLEHWKSA LS EGIR+ DI T
Sbjct: 71 VHYVPGGVARNIAECMSKLGTKPYMISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQT 130
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+VV +I D +GELAA VASVE+IE FLT DWIRQF +I SA VLMVDANLSP AL ASC
Sbjct: 131 SVVCHIFDGDGELAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASC 190
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN- 179
++AAE + PVWFEPVSV KSRR+ SV KYIT SPNEDEL+AMANALS +++F PI R+
Sbjct: 191 QMAAESSTPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCKDVFHPIQRDY 250
Query: 180 ---KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
K S ESLFQ LKPAILVLLEKGI++VVLTLGSDGV LCSKE M L+ TKP G
Sbjct: 251 VGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQG 310
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
F LY+ +T C S+ + + + FAVH PALPASV RLTGAGDCLVGGTLAS+
Sbjct: 311 FGSQLYEIITESCPSNLFLNIATSSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASM 370
Query: 297 SSGLDVMQSVA-------------------------VDDAKTVYAAANVLFYQSML 327
+GLDV+QSVA DDA+ V ++A V+ ++SML
Sbjct: 371 CAGLDVLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVISHRSML 426
>gi|224080307|ref|XP_002306090.1| predicted protein [Populus trichocarpa]
gi|222849054|gb|EEE86601.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/356 (63%), Positives = 266/356 (74%), Gaps = 30/356 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE-GIRRQKDID 59
V+YVLGGVARN+AECMSKLG+KPYMISALG DMAG +LLEHW SA LSTE GI + +DI
Sbjct: 30 VHYVLGGVARNIAECMSKLGTKPYMISALGNDMAGKLLLEHWNSASLSTEVGIMKHQDIK 89
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T V+ NI D GELAAAVASVE++EKFLT WI+Q +I A V+MVDANLS PAL AS
Sbjct: 90 TPVICNIFDTEGELAAAVASVEAVEKFLTSSWIQQSKQNIFCAPVMMVDANLSLPALEAS 149
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
C++AAE N PVWFEPVSV KSRRI SV KY+T SPNEDEL+AMANALS ENMFR I+R+
Sbjct: 150 CQLAAESNTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSHENMFRHIERD 209
Query: 180 KH---SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
+ S ESLFQ LKPAILVLLEKGI++V +TLG+DGV LCS+ + +R L +TK YG
Sbjct: 210 SNSRCSVESLFQFLKPAILVLLEKGIKIVAVTLGADGVFLCSRG-PNVVRFSLDRTKKYG 268
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
S LY V S C SSR+SGA++ S F+VHFPALPASVVRLTGAGDCLVGGTLAS+
Sbjct: 269 VSGQLYDKVVSSCPSSRFSGALQIERSSHLFSVHFPALPASVVRLTGAGDCLVGGTLASL 328
Query: 297 SSGLDVMQSVAV-------------------------DDAKTVYAAANVLFYQSML 327
SGLD+MQS+AV DDA+++Y+AA + F+QSML
Sbjct: 329 CSGLDIMQSIAVGIAAAKSAVEGEANVPSEFSLATITDDARSIYSAAKIPFHQSML 384
>gi|357475207|ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]
gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB [Medicago truncatula]
gi|355508944|gb|AES90086.1| Sugar kinase, putative [Medicago truncatula]
Length = 421
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/356 (60%), Positives = 256/356 (71%), Gaps = 29/356 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V YV GGVARNVAECMSKLG+KPYMISALG DMAGN+LLEHWK+AGLSTEGI + KDI+T
Sbjct: 66 VYYVQGGVARNVAECMSKLGAKPYMISALGFDMAGNLLLEHWKTAGLSTEGILKNKDIET 125
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VV NI DVNGE+AA VASVE++EK+LTPDWI F + A VLMVDANLS P+L ASC
Sbjct: 126 PVVCNIFDVNGEVAAGVASVEALEKYLTPDWILCFKSTLLYAPVLMVDANLSGPSLEASC 185
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI---- 176
K+AA+ PVWFEPVSVTKS+RI SV KY+T SPNEDEL+AMANALSG N FRP+
Sbjct: 186 KMAADTGCPVWFEPVSVTKSQRIRSVAKYVTFASPNEDELIAMANALSGSNEFRPLKEDH 245
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
++ S SLFQ LKPA+LVLL KGI++V++TLGS+GV LCSK S + + KT G
Sbjct: 246 KKDNLSPGSLFQILKPAVLVLLGKGIKVVLVTLGSNGVFLCSKGGPSCYKFPVAKTNRTG 305
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
F LYK+V C + YSG E ++ FAVH P+LPASVVRLTGAGDCLVGGTL SI
Sbjct: 306 FGGQLYKSVMQNCPPNCYSGFSELDISNRLFAVHLPSLPASVVRLTGAGDCLVGGTLTSI 365
Query: 297 SSGLDVMQSVAV-------------------------DDAKTVYAAANVLFYQSML 327
+GLD+MQSV+V DDA++V+ A VL QSM+
Sbjct: 366 CAGLDIMQSVSVGIAVAKAAVEVETNVPSAFSLASIADDARSVFCHAKVLLQQSMM 421
>gi|224080299|ref|XP_002306088.1| predicted protein [Populus trichocarpa]
gi|222849052|gb|EEE86599.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/355 (61%), Positives = 260/355 (73%), Gaps = 31/355 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+YVLGGVARN+AECMSKLG+KPYMISALG DMAGN + + +S E + KDI T
Sbjct: 30 VHYVLGGVARNIAECMSKLGTKPYMISALGNDMAGNYTTSSFIT--ISLEEVLCTKDIKT 87
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V+ NILD GELAAAVASVE++EKFLT WI+Q +I SA V MV+ANLS PAL ASC
Sbjct: 88 PVICNILDTEGELAAAVASVEAVEKFLTSSWIQQSKKNIFSAPVRMVEANLSLPALEASC 147
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++AAE N PVWFEPVSV KSRRI SV KY+T SPNEDEL+AMANALS ENMFR I+R+
Sbjct: 148 QLAAESNTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSHENMFRHIERDS 207
Query: 181 H---SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237
+ S ESLFQ LKPAILVLLEKGI++V +TLG+DGV LCS+ + +R L +TK YGF
Sbjct: 208 NSRCSVESLFQFLKPAILVLLEKGIKIVAVTLGADGVFLCSRG-PNVVRFSLDRTKKYGF 266
Query: 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
S LY V S C SSR+SGA++ S F+VHFPALPASVVRLTGAGDCLVGGTLAS+
Sbjct: 267 SGQLYDKVVSSCPSSRFSGALQIEISSHLFSVHFPALPASVVRLTGAGDCLVGGTLASLC 326
Query: 298 SGLDVMQSVAV-------------------------DDAKTVYAAANVLFYQSML 327
SGLD+MQS+AV DDA+++Y+AA + F+QSML
Sbjct: 327 SGLDIMQSIAVGIAAAKSAVEGEANVPSEFSLATITDDARSIYSAAKIPFHQSML 381
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/351 (55%), Positives = 248/351 (70%), Gaps = 27/351 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+NY+LGGVARNVAECMSKLG+ P++IS +G DMAGN+L E+W+ AGLST+GIR+ KDI T
Sbjct: 73 INYILGGVARNVAECMSKLGANPFLISVVGHDMAGNLLFENWRLAGLSTQGIRKHKDIGT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
AVV ++D +GELAAAVASVE+IEKFLTP+WI QF +I A VLMVDANL+ AL SC
Sbjct: 133 AVVCAVVDFHGELAAAVASVEAIEKFLTPEWIEQFKCNIRDAPVLMVDANLNALALEVSC 192
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR-N 179
++AAE N PVWFEPVSV KSRRI SVVKYI+ SPNEDEL+AMANALSG+++F PI + N
Sbjct: 193 QMAAEYNTPVWFEPVSVAKSRRIASVVKYISFTSPNEDELIAMANALSGQDLFSPIKQDN 252
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT-KPYGFS 238
+ ES F+ LK A+ VLLEKGI++VVLT+GS GV +CSK S +I ++ Y S
Sbjct: 253 SITIESFFEQLKSAVWVLLEKGIKVVVLTVGSRGVFVCSKGQPSFTKISSKEELNKYKSS 312
Query: 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS 298
L++T+ + C + + + S FA+HFPALPASVVRLTG GDCLVGG L SI +
Sbjct: 313 SQLFRTLATSCPPNMFPVSPVTKKSSVLFAIHFPALPASVVRLTGCGDCLVGGMLTSICA 372
Query: 299 GLDVMQSVAV-------------------------DDAKTVYAAANVLFYQ 324
GL++ QS A+ DDA+ VY A ++F++
Sbjct: 373 GLNIYQSTAIGIATAKATVETEHNVPHEFHAAKIADDARLVYTAGRLVFHE 423
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/351 (55%), Positives = 247/351 (70%), Gaps = 27/351 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+NY+LGGVARNVAECMSKLG+ P++IS +G DMAGN+L E+W+ AGLST+GIR+ KDI T
Sbjct: 73 INYILGGVARNVAECMSKLGANPFLISVVGHDMAGNLLFENWRLAGLSTQGIRKHKDIGT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
AVV ++D +GELAAAVASVE+IEKFLTP+WI QF +I A VLMVDANL+ AL SC
Sbjct: 133 AVVCAVVDFHGELAAAVASVEAIEKFLTPEWIEQFKCNIRDAPVLMVDANLNALALEVSC 192
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR-N 179
++AAE N PVWFEPVSV KSRRI SVVKYI+ SPNEDEL+AMANALSG+++F PI + N
Sbjct: 193 QMAAEYNTPVWFEPVSVAKSRRIASVVKYISFTSPNEDELIAMANALSGQDLFSPIKQDN 252
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT-KPYGFS 238
+ ES F+ LK A+ VLLEKGI++VVLT+GS GV +CSK S +I + Y S
Sbjct: 253 SITIESFFEELKSAVWVLLEKGIKVVVLTVGSRGVFVCSKGQPSFTKISSEEELNKYKSS 312
Query: 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS 298
L++T+ + C + + + S FA+HFPALPASVVRLTG GDCLVGG L SI +
Sbjct: 313 SQLFRTLATSCPPNMFPVSPVTEKSSVLFAIHFPALPASVVRLTGCGDCLVGGMLTSICA 372
Query: 299 GLDVMQSVAV-------------------------DDAKTVYAAANVLFYQ 324
GL++ QS A+ DDA+ VY A ++F++
Sbjct: 373 GLNIXQSTAIGIATAKATVETEHNVPHEFHAAKIADDARLVYTAGRLVFHE 423
>gi|13699076|dbj|BAB41199.1| unnamed protein product [Nicotiana tabacum]
Length = 509
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/320 (56%), Positives = 231/320 (72%), Gaps = 4/320 (1%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ VLGGVARNVA+CMSKL +KP++ISA+GLD+ G L EHW+S LS +GI R +DI+T
Sbjct: 22 ITKVLGGVARNVADCMSKLKAKPFLISAVGLDVPGKSLYEHWESTRLSVQGILRLQDIET 81
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
AV N+ D G L AAVA V+SI+KFLTP WI +F I SA +LMVDANLS +L ASC
Sbjct: 82 AVSCNVFDGKGGLVAAVACVDSIDKFLTPKWIEKFKSKIRSAPILMVDANLSSHSLEASC 141
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALS--GENMFRPIDR 178
++AA+ PVWF+PVSV +SRRI SVV Y+ VS NEDEL+AMANALS G + F P+ R
Sbjct: 142 RMAAQFTTPVWFDPVSVARSRRIASVVHYVRFVSANEDELIAMANALSRRGRDRFSPVQR 201
Query: 179 NKHSA-ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYG 236
+ S ESLF+ LKPAI LL+ G++++V+T+G DGV LCSK + + ++ + +
Sbjct: 202 DLCSTVESLFEMLKPAISCLLDNGVKVIVVTVGQDGVFLCSKAKSVLLQKLDFKGNRLPS 261
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
S+ L + V + C S R+ GA S F+AVHFPAL ASVVRLTGAGDCLVGGT+AS+
Sbjct: 262 SSKQLREAVDAECSSGRFYGASRYGLYSDFYAVHFPALSASVVRLTGAGDCLVGGTIASL 321
Query: 297 SSGLDVMQSVAVDDAKTVYA 316
S+GLDVMQSVAV A +A
Sbjct: 322 SAGLDVMQSVAVGIAAAKFA 341
>gi|21536998|gb|AAM61339.1| unknown [Arabidopsis thaliana]
Length = 376
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/353 (51%), Positives = 243/353 (68%), Gaps = 37/353 (10%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ GGVARNVA+C+ KLG P+MI LGLD N+LL+ WK LS +GI R++DI T +
Sbjct: 33 FAPGGVARNVADCIFKLGITPFMIGTLGLDGPANVLLKEWK---LSMKGILRREDISTPI 89
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
VS + D NGE+AA VA V+++E FLTP+WI++F ++ISSA +LMVDANLS AL ASCK+
Sbjct: 90 VSLVYDTNGEVAAGVAGVDAVENFLTPEWIQRFEYNISSAPLLMVDANLSSLALEASCKL 149
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI--DRNK 180
AAE ++PVWFEPVSVTKS+RI S+ KY+T+VSPN+DEL+AMANAL +N+F P D NK
Sbjct: 150 AAESSVPVWFEPVSVTKSQRIASIAKYVTIVSPNQDELIAMANALCAKNLFHPFRSDENK 209
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S E +F+ LKPAILVLL+ G+++V++TLGS+G LLCSK + + L + + S +
Sbjct: 210 LSIEDMFRALKPAILVLLKNGVKVVIVTLGSNGALLCSK---GNPKKALNIDRKFLRSGE 266
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
++K V S C +R+S E FA+HFP +PA V +LTGAGDCLVGGT+AS+S GL
Sbjct: 267 VFKRVQSVCSPNRFS---ELGSNRSLFAMHFPTIPAKVKKLTGAGDCLVGGTVASLSDGL 323
Query: 301 DVMQSVAV-------------------------DDAKTVYAAANVLF-YQSML 327
D++QS+AV DA+ VY A +L +QSML
Sbjct: 324 DLIQSLAVGIASAKAAVESDDNVPPEFKLDLISGDAELVYHGAKMLMVHQSML 376
>gi|297847224|ref|XP_002891493.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337335|gb|EFH67752.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 378
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 243/353 (68%), Gaps = 35/353 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ GGVARNVAEC+ KLG P+MI LGLD N+LL+ WK LS GI R++DI T +
Sbjct: 33 FAPGGVARNVAECIFKLGITPFMIGTLGLDGPANVLLKEWK---LSMTGILRREDISTPI 89
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
VS + D+NGE+AA VA V+++EKFLTP+WI++F ++ISSA +LMVDANLS AL ASCK+
Sbjct: 90 VSLVYDINGEVAAGVAGVDAVEKFLTPEWIQRFEYNISSAPLLMVDANLSTLALEASCKL 149
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP--IDRNK 180
AAE N+PVWFEPVSVTKS+RI S+ KY+T+VSPN+DEL+ +ANAL + +F P ++ N
Sbjct: 150 AAEFNVPVWFEPVSVTKSQRIASIAKYVTIVSPNQDELITLANALCAKKIFHPFRLEENN 209
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S E +F TLKPAILVLL+ +++V++TLGS+G LLCSK + ++ L + + S +
Sbjct: 210 LSIEDMFCTLKPAILVLLDNDVKVVIVTLGSNGALLCSK---GNPKMALNLNRKFPRSGE 266
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
++K V S C +R+S + FA+HFP +PA V +LTGAGDCLVGGT+AS+S GL
Sbjct: 267 IFKRVQSVCSPNRFS-ELGSNRSPSLFAMHFPTIPAKVKKLTGAGDCLVGGTVASLSHGL 325
Query: 301 DVMQSVAV-------------------------DDAKTVYAAANVLF-YQSML 327
D++QS+AV DDA+ VY A +L +QSML
Sbjct: 326 DLIQSLAVGIASAKAAVESDDNVPPEFKLDLIYDDAELVYNGAKMLMVHQSML 378
>gi|18402606|ref|NP_564543.1| pfkB-type carbohydrate kinase-like protein [Arabidopsis thaliana]
gi|15027919|gb|AAK76490.1| unknown protein [Arabidopsis thaliana]
gi|23296431|gb|AAN13115.1| unknown protein [Arabidopsis thaliana]
gi|332194300|gb|AEE32421.1| pfkB-type carbohydrate kinase-like protein [Arabidopsis thaliana]
Length = 378
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/353 (51%), Positives = 243/353 (68%), Gaps = 35/353 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ GGVARNVA+C+ KLG P+MI LGLD N+LL+ WK LS +GI R++DI T +
Sbjct: 33 FAPGGVARNVADCIFKLGITPFMIGTLGLDGPANVLLKEWK---LSMKGILRREDISTPI 89
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
VS + D NGE+AA VA V+++E FLTP+WI++F ++ISSA +LMVDANLS AL ASCK+
Sbjct: 90 VSLVYDTNGEVAAGVAGVDAVENFLTPEWIQRFEYNISSARLLMVDANLSSLALEASCKL 149
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI--DRNK 180
AAE ++PVWFEPVSVTKS+RI S+ KY+T+VSPN+DEL+AMANAL +N+F P D NK
Sbjct: 150 AAESSVPVWFEPVSVTKSQRIASIAKYVTIVSPNQDELIAMANALCAKNLFHPFRSDENK 209
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S E +F+ LKPAILVLL+ G+++V++TLGS+G LLCSK + + L + + S +
Sbjct: 210 LSIEDMFRALKPAILVLLKNGVKVVIVTLGSNGALLCSK---GNPKKALNIDRKFLRSGE 266
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
++K V S C +R+S + FA+HFP +PA V +LTGAGDCLVGGT+AS+S GL
Sbjct: 267 VFKRVQSVCSPNRFS-ELGSNRSPSLFAMHFPTIPAKVKKLTGAGDCLVGGTVASLSDGL 325
Query: 301 DVMQSVAV-------------------------DDAKTVYAAANVLF-YQSML 327
D++QS+AV DA+ VY A +L +QSML
Sbjct: 326 DLIQSLAVGIASAKAAVESDDNVPPEFKLDLISGDAELVYNGAKMLMVHQSML 378
>gi|147834309|emb|CAN61115.1| hypothetical protein VITISV_035585 [Vitis vinifera]
Length = 731
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 209/305 (68%), Gaps = 29/305 (9%)
Query: 51 GIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN 110
GIR+ DI T+VV +I D +GE+AA VASVE+IE FLT DWIRQF +I SA VLMVDAN
Sbjct: 14 GIRKHHDIQTSVVCHIFDGDGEVAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDAN 73
Query: 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGE 170
LSP AL ASC++AAE + PVWFEPVSV KSRR+ SV KYIT SPNEDEL+AMANALS +
Sbjct: 74 LSPSALEASCQMAAESSTPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCK 133
Query: 171 NMFRPIDRN----KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
++F PI R+ K S ESLFQ LKPAILVLLEKGI++VVLTLGSDGV LCSKE M
Sbjct: 134 DVFHPIQRDXVGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMN 193
Query: 227 IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGD 286
L+ TKP GF LY+ +T C S+ + + AVH PALPA V RLTGAGD
Sbjct: 194 NVLKGTKPQGFGSQLYEIITESCPSNLFLNIATSSSKXYPXAVHLPALPAXVARLTGAGD 253
Query: 287 CLVGGTLASISSGLDVMQSVA-------------------------VDDAKTVYAAANVL 321
CLVGGTLAS+ +GLDV+QSVA DDA+ V ++A V+
Sbjct: 254 CLVGGTLASMCAGLDVLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVI 313
Query: 322 FYQSM 326
++SM
Sbjct: 314 SHRSM 318
>gi|115462457|ref|NP_001054828.1| Os05g0185700 [Oryza sativa Japonica Group]
gi|53749291|gb|AAU90150.1| unknown protein [Oryza sativa Japonica Group]
gi|113578379|dbj|BAF16742.1| Os05g0185700 [Oryza sativa Japonica Group]
gi|215693822|dbj|BAG89021.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 421
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/328 (51%), Positives = 225/328 (68%), Gaps = 11/328 (3%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V YV GGVARN+AEC+ KL ++P+MIS +G DMAG+ LL++W+SAGL T+GI + D+ T
Sbjct: 71 VKYVSGGVARNIAECICKLETRPFMISVVGNDMAGDFLLKYWRSAGLCTDGILQIDDVTT 130
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+VSN+ D +GEL A VASV ++EKFL+P WI QF HIS+A +LM+DANLSP +L A+C
Sbjct: 131 PIVSNVFDGSGELIAGVASVGAVEKFLSPSWICQFRLHISTAPLLMLDANLSPDSLEAAC 190
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN--MFRPIDR 178
KIA E +PV+FEPVS+ K RI + KYIT SPNE ELVAMAN+LS F +++
Sbjct: 191 KIAHESGVPVFFEPVSLAKGSRIAPIAKYITYTSPNEIELVAMANSLSPPEKYTFVKMEQ 250
Query: 179 NKHSA---ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
+K+ A E LF+ L PA+ LLEKGI+ +++TLGS+GV +C KE S M RK++
Sbjct: 251 SKNKAKAVEYLFEMLSPAMFFLLEKGIKFLLVTLGSNGVFVCCKESTSLMD--QRKSEMM 308
Query: 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295
FS L + + RC S + G S+ HFPA+ ASVV LTGAGDC VGG +++
Sbjct: 309 SFSTPLLQKL-ERCFPSNMLVDLPREGSSRTCVFHFPAVSASVVSLTGAGDCFVGGVISA 367
Query: 296 ISSGLDVMQSVAVDDA---KTVYAAANV 320
+ GL +MQSVAV A +V + AN+
Sbjct: 368 LCGGLGMMQSVAVGIAIAKSSVESEANI 395
>gi|218196218|gb|EEC78645.1| hypothetical protein OsI_18736 [Oryza sativa Indica Group]
gi|222630443|gb|EEE62575.1| hypothetical protein OsJ_17378 [Oryza sativa Japonica Group]
Length = 622
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/328 (51%), Positives = 226/328 (68%), Gaps = 11/328 (3%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V YV GGVARN+AEC+ KL ++P+MIS +G DMAG+ LL++W+SAGL T+GI + D+ T
Sbjct: 272 VKYVSGGVARNIAECICKLETRPFMISVVGNDMAGDFLLKYWRSAGLCTDGILQIDDVTT 331
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+VSN+ D +GEL A VASV ++EKFL+P WI QF HIS+A +LM+DANLSP +L A+C
Sbjct: 332 PIVSNVFDGSGELIAGVASVGAVEKFLSPSWICQFRLHISTAPLLMLDANLSPDSLEAAC 391
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG--ENMFRPIDR 178
KIA E +PV+FEPVS+ K RI + KYIT SPNE ELVAMAN+LS + F +++
Sbjct: 392 KIAHESGVPVFFEPVSLAKGSRIAPIAKYITYTSPNEIELVAMANSLSPPEKYTFVKMEQ 451
Query: 179 NKHSA---ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
+K+ A E LF+ L PA+ LLEKGI+ +++TLGS+GV +C KE S M RK++
Sbjct: 452 SKNKAKAVEYLFEMLSPAMFFLLEKGIKFLLVTLGSNGVFVCCKESTSLM--DQRKSEMM 509
Query: 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295
FS L + + RC S + G S+ HFPA+ ASVV LTGAGDC VGG +++
Sbjct: 510 SFSTPLLQKL-ERCFPSNMLVDLPREGSSRTCVFHFPAVSASVVSLTGAGDCFVGGVISA 568
Query: 296 ISSGLDVMQSVAVDDA---KTVYAAANV 320
+ GL +MQSVAV A +V + AN+
Sbjct: 569 LCGGLGMMQSVAVGIAIAKSSVESEANI 596
>gi|357117735|ref|XP_003560618.1| PREDICTED: pseudouridine kinase-like [Brachypodium distachyon]
Length = 491
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/328 (51%), Positives = 222/328 (67%), Gaps = 10/328 (3%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+ GGVARN+AECM+KLG++P MIS +G D+AG+ LL++W+SAGL T+GI R D T
Sbjct: 140 VKYIGGGVARNIAECMAKLGARPLMISVVGNDIAGDFLLKYWRSAGLCTDGILRVHDAAT 199
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VVSN+ D +GEL A VASV ++E FLTP WI QF HIS+A +LM+DANL P +L A+C
Sbjct: 200 PVVSNVFDGSGELFAGVASVGAVENFLTPSWINQFYLHISTAPLLMLDANLPPQSLQAAC 259
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALS--GENMFRPIDR 178
KIA E +PV FEPVSV KS RI + +YIT SPNE EL+AMAN LS G F +++
Sbjct: 260 KIAYESGVPVLFEPVSVAKSSRIAPIAEYITCTSPNEMELIAMANTLSAPGRYNFVKLEQ 319
Query: 179 NKHSAES---LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
+ E+ LF+ L PA+ LLEKGI+L+++TLGS+GV +C KE ++ M+ G +K K
Sbjct: 320 CNNKTEAVDYLFKMLSPAMFFLLEKGIKLLLVTLGSNGVFICCKEHVNFMK-GEQKCKMT 378
Query: 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295
+S L + C + G S+ H PA+ ASVV LTGAGDCLVGG L+S
Sbjct: 379 PYSAQLLGKLEG-CSPFSMPVNLSREGSSRTCVFHLPAISASVVSLTGAGDCLVGGVLSS 437
Query: 296 ISSGLDVMQSVAVDDA---KTVYAAANV 320
+ GLD+MQSVAV A +V + AN+
Sbjct: 438 LCGGLDIMQSVAVGIAIAKASVESEANI 465
>gi|326531006|dbj|BAK04854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 225/329 (68%), Gaps = 11/329 (3%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE-GIRRQKDID 59
V Y+ GGVARN+AECM+KLG++P+MIS +G DMAG+ LL++W+ AGL T+ GI + D+
Sbjct: 82 VKYIGGGVARNIAECMAKLGTQPHMISVIGDDMAGDFLLKYWRVAGLCTDVGILQVPDVT 141
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T VVSN+ D NGEL A VASV+++E FLTP WI QF IS+A +LM+DANLSP +L A+
Sbjct: 142 TPVVSNVFDRNGELFAGVASVQAVETFLTPSWIYQFYRRISTAPLLMLDANLSPESLQAA 201
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR--PID 177
CKIA E +PV FEPVSV KS RI + ++IT SPNE ELVAMANALS F ++
Sbjct: 202 CKIAYESGVPVLFEPVSVVKSSRIAPIAEHITCTSPNEIELVAMANALSTPGKFNLVKLE 261
Query: 178 RNKHSAES---LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
+ + AES LF+ L PA+ LLEKGI+L+++TLGS+GV +C +E ++ ++ ++ K
Sbjct: 262 QCNNKAESVDYLFEMLSPAMFFLLEKGIKLLLVTLGSNGVFICCREHVNFIK-DQKRCKV 320
Query: 235 YGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLA 294
FS L + + C S + G S+ H PA ASVV LTGAGDCLVGG L+
Sbjct: 321 TPFSTQLLEKLEG-CFLSSTPVNLSREGSSRTCVFHLPATSASVVSLTGAGDCLVGGFLS 379
Query: 295 SISSGLDVMQSVAVDDA---KTVYAAANV 320
S+ GLD+MQSVAV A +V + AN+
Sbjct: 380 SLCGGLDIMQSVAVGIAVAKASVESEANI 408
>gi|413948853|gb|AFW81502.1| hypothetical protein ZEAMMB73_419515 [Zea mays]
Length = 418
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 10/328 (3%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+ GGVARN+AECMSKLG++P+MIS +G D+AG+ LL++W+SAGL +EGI + ++ T
Sbjct: 67 VKYISGGVARNIAECMSKLGTQPFMISVVGNDLAGDFLLKYWRSAGLCSEGILQVDNVAT 126
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VVSN+ D GEL A VASV+++E F+T WI F HHI++A ++M+DANLSP +L A+C
Sbjct: 127 PVVSNVFDGTGELIAGVASVQAVENFITSSWIYHFRHHIANAPLVMLDANLSPESLKAAC 186
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG--ENMFRPIDR 178
+A E +PV FEPVSV K RRI V +YIT SPNE ELVAMAN+LS + F I++
Sbjct: 187 IMAYEFGVPVLFEPVSVVKCRRIAPVAEYITCTSPNEIELVAMANSLSPSVKYNFHTIEQ 246
Query: 179 NKHSA---ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
K A E +FQ L PA+ LLEKGI+L+++TLGS+GV +C KE + M+ K K
Sbjct: 247 FKEKADTVEYIFQMLSPAMFFLLEKGIKLLIVTLGSNGVFICCKEHTNFMK-DQHKCKQT 305
Query: 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295
FSR L + + C S + S+ H PA+ ASV+ LTGAGDCLVGG L++
Sbjct: 306 PFSRQLLEKMDG-CFPSNNLVNLCRESSSRTCVFHLPAISASVISLTGAGDCLVGGALSA 364
Query: 296 ISSGLDVMQSVAVDDA---KTVYAAANV 320
+ +G D++QSVAV A +V + AN+
Sbjct: 365 LCAGFDIIQSVAVGVAIAKASVESEANI 392
>gi|297847242|ref|XP_002891502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337344|gb|EFH67761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 207/304 (68%), Gaps = 35/304 (11%)
Query: 52 IRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL 111
I R++DI T +VS + D NGE+AA V +++EKFLTP+WI++F ++ISSA VLMVDANL
Sbjct: 47 ILRREDISTPIVSLVYDTNGEVAAGV---DAVEKFLTPEWIQRFKYNISSAPVLMVDANL 103
Query: 112 SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
+ AL ASCK+A E N+PVWFEPVSVTKS+RI SV KYITVVSPN+DEL+AMANAL +N
Sbjct: 104 TTLALEASCKLAVEFNVPVWFEPVSVTKSQRIASVAKYITVVSPNQDELIAMANALCAKN 163
Query: 172 MFRPI--DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
+F P + N S E +F+ LKPAI +LLE GI++V++TLGS+G LLCSK + + L
Sbjct: 164 LFHPFKSEENTLSIEGIFRALKPAIWILLENGIKVVIVTLGSNGALLCSK---GNPKKAL 220
Query: 230 RKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLV 289
+ + S +++K V S C +R+S + S FA+HFP +PA V +LTGAGDCLV
Sbjct: 221 NINRKFIRSGEIFKRVQSVCPPNRFSELLSNRSPS-LFAMHFPTIPAKVKKLTGAGDCLV 279
Query: 290 GGTLASISSGLDVMQSVAV-------------------------DDAKTVYAAANVL-FY 323
GGT+AS+S GLD++QS+AV DDA+ VY A +L +
Sbjct: 280 GGTVASLSDGLDLIQSLAVGIASAKAAVESDDNVPPEFNLDLVTDDAELVYYGAKMLVVH 339
Query: 324 QSML 327
QSML
Sbjct: 340 QSML 343
>gi|168032202|ref|XP_001768608.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680107|gb|EDQ66546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 402
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/316 (44%), Positives = 188/316 (59%), Gaps = 31/316 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y GGVARN+AE M+ LGS P++IS +G D+AG +L+HWKS GLST GIR K T
Sbjct: 68 VRYENGGVARNIAENMALLGSLPFLISVVGDDVAGESMLKHWKSLGLSTAGIRTCKGART 127
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VVS + D GELAAAVA IE+ LT +WI +F I A+++++DANL PPAL A+C
Sbjct: 128 PVVSAVFDNQGELAAAVADTNLIEEKLTVEWIMKFKDDIQRATIIILDANLPPPALEATC 187
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR------ 174
K+A E N+P+WFEPVSV KS R + + IT SPNE EL+AMA ++ N
Sbjct: 188 KLAKETNVPIWFEPVSVAKSVRASRFLNLITYTSPNEAELIAMAESVCQVNNIEKKLFDD 247
Query: 175 --PIDRN-KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
P D+N A SL++T + I LL+ G+ ++LTLG G +LCS SS +G K
Sbjct: 248 EVPADKNLPEPAASLWRT-RHYIQSLLDTGLGYIILTLGEYGAVLCSLRSTSSENLGTVK 306
Query: 232 TKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGG 291
P SG + G F HFPAL AS+ L+GAGDCL G
Sbjct: 307 ETP-------------------LSGISKNESGINFL--HFPALRASISNLSGAGDCLAAG 345
Query: 292 TLASISSGLDVMQSVA 307
T++++SSG D+ ++A
Sbjct: 346 TVSALSSGADISSALA 361
>gi|242090275|ref|XP_002440970.1| hypothetical protein SORBIDRAFT_09g018040 [Sorghum bicolor]
gi|241946255|gb|EES19400.1| hypothetical protein SORBIDRAFT_09g018040 [Sorghum bicolor]
Length = 302
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 178/264 (67%), Gaps = 11/264 (4%)
Query: 52 IRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL 111
I + D+ T VVSN+ D +GEL A VASV+++E F+TP WI +F HHI++A ++M+DANL
Sbjct: 2 IFQADDVATPVVSNVFDGSGELIAGVASVQAVENFITPSWIYRFRHHITNAPLVMLDANL 61
Query: 112 SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG-- 169
P +L A+C A E +PV FEPVSV KSRRI V +YIT SPNE ELVAMAN+LS
Sbjct: 62 PPESLKAACITAYESEVPVLFEPVSVVKSRRIAPVAEYITCTSPNEIELVAMANSLSPSV 121
Query: 170 ENMFRPIDRNKHSA---ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
+ F I++ K + E LF+ L PA+ LLEKGI+L+++TLGS+GV +C KE + M+
Sbjct: 122 KYNFHKIEQFKEKSDAVEYLFEMLSPAMFFLLEKGIKLLIVTLGSNGVFICCKEHTNFMK 181
Query: 227 IGLRKTKPYGFSRDLYKTVTSRCH--SSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGA 284
RK K FSR L + + C ++R + E + + F H PA+ ASV+ LTGA
Sbjct: 182 -DQRKCKQTRFSRQLLEKMDG-CFLLNNRVNLCGESSSRTCVF--HLPAISASVISLTGA 237
Query: 285 GDCLVGGTLASISSGLDVMQSVAV 308
GDCLVGG L+++ +G D++QSVA+
Sbjct: 238 GDCLVGGVLSALCAGFDIIQSVAI 261
>gi|413948852|gb|AFW81501.1| hypothetical protein ZEAMMB73_419515 [Zea mays]
Length = 220
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 117/152 (76%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+ GGVARN+AECMSKLG++P+MIS +G D+AG+ LL++W+SAGL +EGI + ++ T
Sbjct: 67 VKYISGGVARNIAECMSKLGTQPFMISVVGNDLAGDFLLKYWRSAGLCSEGILQVDNVAT 126
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
VVSN+ D GEL A VASV+++E F+T WI F HHI++A ++M+DANLSP +L A+C
Sbjct: 127 PVVSNVFDGTGELIAGVASVQAVENFITSSWIYHFRHHIANAPLVMLDANLSPESLKAAC 186
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITV 152
+A E +PV FEPVSV K RRI V +Y++V
Sbjct: 187 IMAYEFGVPVLFEPVSVVKCRRIAPVAEYVSV 218
>gi|5430774|gb|AAD43174.1|AC007504_29 Hypothetical Protein [Arabidopsis thaliana]
Length = 282
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 117/168 (69%), Gaps = 6/168 (3%)
Query: 143 ITSVVKYITVVSPNEDELVAMANALSGENMFRPI--DRNKHSAESLFQTLKPAILVLLEK 200
+ V +T+VSPN+DEL+AMANAL +N+F P D NK S E +F+ LKPAILVLL+
Sbjct: 91 VAGVDAVVTIVSPNQDELIAMANALCAKNLFHPFRSDENKLSIEDMFRALKPAILVLLKN 150
Query: 201 GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEP 260
G+++V++TLGS+G LLCSK + + L + + S +++K V S C +R+S +
Sbjct: 151 GVKVVIVTLGSNGALLCSK---GNPKKALNIDRKFLRSGEVFKRVQSVCSPNRFS-ELGS 206
Query: 261 AGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAV 308
FA+HFP +PA V +LTGAGDCLVGGT+AS+S GLD++QS+AV
Sbjct: 207 NRSPSLFAMHFPTIPAKVKKLTGAGDCLVGGTVASLSDGLDLIQSLAV 254
>gi|384251010|gb|EIE24488.1| Ribokinase-like protein [Coccomyxa subellipsoidea C-169]
Length = 337
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 159/334 (47%), Gaps = 69/334 (20%)
Query: 1 VNYVLGGVARNVAECMSKLGS------------KPYMISALGLDMAGNILLEHWKSAGLS 48
V GGVARN+ EC+++L + KP ++S LG D AG++LL H +S GL
Sbjct: 25 VQQTPGGVARNICECLARLCNSDPLPASARARLKPLLVSVLGQDQAGDMLLSHLQSLGLP 84
Query: 49 TEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVD 108
T I R T VS I D GE+AA+VA V ++E+ L P +RQ I SA ++M+D
Sbjct: 85 THAIHRVPGATTPSVSIIFDRGGEVAASVADVGALEERL-PAVLRQHTADIQSAPLVMLD 143
Query: 109 ANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANAL- 167
NLSP AL + ++A+E +P+W+EPVS K+ R T + + +SPN EL AMA AL
Sbjct: 144 GNLSPDALLDAAQLASEKVVPIWYEPVSAAKAVRATLALHMMDYISPNAKELTAMAEALI 203
Query: 168 ----------SGENMFR---PIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
SG N R P +A + + L P + +L G+ VVLTLG G
Sbjct: 204 SAPARQQRFQSGANDPRQNWPTLGASEAAGNAVELLSPQLCTVLHAGVGCVVLTLGHLGA 263
Query: 215 LLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHF-PA 273
LC+ +G ++ + F A
Sbjct: 264 ALCTL-----------------------------------------SGDGRWLEIGFMAA 282
Query: 274 LPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307
PA VV +GAGDCLV G L + G +++A
Sbjct: 283 PPARVVNTSGAGDCLVAGALFGLLRGCSPTEALA 316
>gi|307108058|gb|EFN56299.1| hypothetical protein CHLNCDRAFT_144692 [Chlorella variabilis]
Length = 541
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 155/346 (44%), Gaps = 87/346 (25%)
Query: 1 VNYVLGGVARNVAECMSKL-----------------------GSKPYMISALGLDMAGNI 37
V GGVARN+AE ++ L P ++SA+G D+AG
Sbjct: 79 VTQSAGGVARNMAEALALLLKSAGSGAGSGGGSGAGTPAAAPPPLPLLVSAVGDDLAGTA 138
Query: 38 LLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIH 97
LL+HW+S GLST I R T VS + D+ GE+AA VA V S+E L P +R
Sbjct: 139 LLQHWRSLGLSTGLISRLPGAATPTVSVVFDLGGEVAACVADVASLEARLAPPLLRAPAV 198
Query: 98 HISSASVL--MVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSP 155
+ A+ M+D NLS AL C AA +PVWFEPVSV KS R S++ +T VSP
Sbjct: 199 AAALAAAPVVMLDGNLSAAALEEVCGQAAAAGVPVWFEPVSVPKSTRAASLLSLLTFVSP 258
Query: 156 NEDELVAMANALSGENMFR-----PIDRNKHSAESLFQT---------------LKPAIL 195
NE EL AMA A+ + + P R E+ L P I
Sbjct: 259 NERELAAMAAAVRRQQQAQRGTQAPSSRGSPQQEAGGAGPTAAAAASPRASLLRLLPDIA 318
Query: 196 VLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255
LL G+R VV+T+G G LC+ G R
Sbjct: 319 TLLLAGVRHVVVTMGPQGAALCT----------------LGPDR---------------- 346
Query: 256 GAMEPAGGSQFFAV-HFPALPASVVRLTGAGDCLVGGTLASISSGL 300
Q AV H PALPA+VV +GAGDCLV G L +++ GL
Sbjct: 347 ---------QAVAVCHVPALPAAVVNCSGAGDCLVAGCLFALARGL 383
>gi|330806412|ref|XP_003291164.1| hypothetical protein DICPUDRAFT_155738 [Dictyostelium purpureum]
gi|325078684|gb|EGC32322.1| hypothetical protein DICPUDRAFT_155738 [Dictyostelium purpureum]
Length = 760
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 48/313 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N +GGV RN+AE +++L P IS LG D+ +ILLE + + +ST GI +++ T
Sbjct: 461 MNVKMGGVGRNIAEVLTRLELNPLFISLLGDDIHSHILLEEFNNLNMSTYGIASKENSKT 520
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A+ + I+D G+LA A+A ++ I +TP++I+ F + + +++ D N+ ++
Sbjct: 521 AIYNAIMDEKGDLAVAIAQMD-IFDHITPNYIQHFTDKLDKSEMIVFDGNIPTESMKYLA 579
Query: 121 KIAAECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+++ I +WFEP SV KS +I + ++ +IT +SPN DEL ++ + +++ ID+
Sbjct: 580 SLSSSKKIKLWFEPTSVFKSSKIVDSQIISHITFISPNRDELFKLSQEILSKHLVSNIDK 639
Query: 179 ----NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
N + + L + +K VL+E GI+ VV LG GVLL K
Sbjct: 640 FTNLNFENKQDL-ENIKKHSNVLIEAGIKHVVAKLGKQGVLLTFK--------------- 683
Query: 235 YGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP-ASVVRLTGAGDCLVGGTL 293
+ G Q+ + P L +V + G+GD LV ++
Sbjct: 684 ------------------------DSEGKIQYVMFNAPDLKDTEIVDVNGSGDSLVACSI 719
Query: 294 ASISSGLDVMQSV 306
S+ SG D+ +S+
Sbjct: 720 YSLLSGNDLSKSI 732
>gi|255071879|ref|XP_002499614.1| predicted protein [Micromonas sp. RCC299]
gi|226514876|gb|ACO60872.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 125/231 (54%), Gaps = 20/231 (8%)
Query: 6 GGVARNVAECMSKL----GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
GGV RN+AE +++L G+ P +I+A+G D+AG L++ W++ G G+R T
Sbjct: 122 GGVGRNIAEGIARLVGPHGTPPLLIAAVGDDLAGRALIDAWRAVGADPRGVRVCAAASTP 181
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL--AAS 119
VV+ +LD +GE+AA+VA + E + P WI F I A+V +VD N +P +
Sbjct: 182 VVTTVLDHDGEVAASVADTLTAETGVDPSWISSFADSIGRATVCVVDGNCTPECINHVVE 241
Query: 120 CK-------IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANAL---SG 169
C E VWFEPVSVTKS R + + I SPN E AMANA G
Sbjct: 242 CTQRVVGEWANGEQKPIVWFEPVSVTKSVRANASLAKIDYASPNAAECRAMANAPRRGRG 301
Query: 170 ENMFRPIDR---NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLC 217
N RP+D SAE+ ++ + VLL+ G+ VVLTLG+ G +LC
Sbjct: 302 SNP-RPMDSAIFEFTSAEAAVAEMRDDVEVLLDAGVGAVVLTLGALGCVLC 351
>gi|301117004|ref|XP_002906230.1| indigoidine synthase A family protein, putative [Phytophthora
infestans T30-4]
gi|262107579|gb|EEY65631.1| indigoidine synthase A family protein, putative [Phytophthora
infestans T30-4]
Length = 707
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 152/324 (46%), Gaps = 49/324 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AEC+ +L P ++S++G D +G+ILL++ K G++T G++ + TAV S
Sbjct: 378 GGVGRNIAECLHRLRLDPLLVSSIGKDASGSILLDNLKKLGMNTSGVQISDKLSTAVYSA 437
Query: 66 ILDVNGELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+LD G++ AA+A + ESIE + D I A +++ D NL P + K
Sbjct: 438 VLDSTGDMDAAIADMSAFESIESEVISD------QAIDKAKLVIADGNLVPATIGDLFKR 491
Query: 123 AAECNIPVWFEPVSVTKSRRI-----TSVVKYITVVSPNEDELVAMANALSGENMFRPID 177
+A + WFEP SV K+ R+ S +KY+ SPN DEL A++NA+ + P
Sbjct: 492 SARLGVDTWFEPTSVQKAIRVVEGDGVSSMKYM---SPNADELHAISNAIREKTDVSPET 548
Query: 178 RNKHS---------AESLFQTLKPAILVLL------EKGIRLVVLTLGSDGVLLCSKELL 222
+ S E + + I LL K + +++TLG GVL+ S
Sbjct: 549 SERFSLTKESGIIPTEEMTRLKNDLITTLLAMADGDTKRPKHILVTLGKHGVLVAS---- 604
Query: 223 SSMRIGLRKTKPYGFSRDLYKTVTSRCH-SSRYSGAMEPAGGSQFFAVHFPALPASVVRL 281
D + + C + G GG H P + V
Sbjct: 605 ------------INMPADELREIVEDCDFDAEIWGMHHVHGGHSLTMAHLPGVEIPVKNC 652
Query: 282 TGAGDCLVGGTLASISSGLDVMQS 305
TGAGD +VGGT+ + G DV+QS
Sbjct: 653 TGAGDSMVGGTVYGLLEGYDVLQS 676
>gi|348688122|gb|EGZ27936.1| hypothetical protein PHYSODRAFT_343685 [Phytophthora sojae]
Length = 712
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 151/321 (47%), Gaps = 39/321 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AEC+ +L P ++S++G D G++LLE+ K GL T GI + TAV S
Sbjct: 379 GGVGRNIAECLHRLRLDPLLVSSVGNDAPGSVLLENLKKLGLDTSGITVSDKLATAVYSA 438
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD G++ AA+A + + F + + I A++++ D NL+P + K +A
Sbjct: 439 VLDSTGDMDAAIADMSA---FESIESSSISDKTIDKANLIVADGNLTPRTIGDLFKRSAR 495
Query: 126 CNIPVWFEPVSVTKSRRITS--VVKYITVVSPNEDELVAMANAL---------SGENMFR 174
+ WFEP SV K+ + V ++ +SPN DEL A++ A+ S E+
Sbjct: 496 LGVDTWFEPTSVQKALHVVEGDGVSWMKYMSPNADELHAISQAIRQKLEDANVSSESTDE 555
Query: 175 PIDRNKHSA----ESLFQTLKPAILVLL------EKGIRLVVLTLGSDGVLLCSKELLSS 224
K S E + Q I LL K + V++TLG GVL+ S + S
Sbjct: 556 RFPLTKESGIIPKEEMTQLKNDLITALLAMANGDTKQSKHVLVTLGKHGVLVASINV--S 613
Query: 225 MRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGA 284
+R GF D++ G GG VH P + V TGA
Sbjct: 614 IRDLREVVDECGFPVDIW-------------GMHHVHGGHSVTMVHLPGVEILVTNCTGA 660
Query: 285 GDCLVGGTLASISSGLDVMQS 305
GD +VGGT+ + G D+ QS
Sbjct: 661 GDSMVGGTIYGLLEGYDIFQS 681
>gi|281208790|gb|EFA82965.1| hypothetical protein PPL_03743 [Polysphondylium pallidum PN500]
Length = 719
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 59/327 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N +GGV +NVAE +S+L + IS +G D+ NI+ +H++S +ST+G++R T
Sbjct: 406 MNIKVGGVGKNVAEIISRLQLETLFISMVGDDVQSNIIYDHFRSVNISTDGVKRVSGSST 465
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + I++ G+L A+ S+ I K +TPD+I QF I + +++ DAN+ + +
Sbjct: 466 ATYNAIMNEVGDLEVAI-SIMDIFKKITPDYIAQFKEEIRKSKMIVFDANIPLETMVSLA 524
Query: 121 KIAAECNIPVWFEPVSVTKS--------RRITSVVKYITVVSPNEDELVAM--------A 164
+A E IP++FEP SV KS + ++ IT SPN DEL+ M +
Sbjct: 525 ALAKESAIPMFFEPTSVPKSSIPMLSSEKAGVDIIPMITYSSPNVDELLEMSKKVCLRVS 584
Query: 165 NALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSS 224
N+ E + R +D++ H +S+ Q+++ +LLE G++ + + G GV + S
Sbjct: 585 NSKKVEQLCREVDKSNHKDKSV-QSIELHSNILLEAGMQTLFVKFGKSGVFVMS------ 637
Query: 225 MRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA---LPASVVRL 281
L K S+ HF A +V +
Sbjct: 638 ----------------LNKETNDNALVSQ----------------HFDAPNIKDEELVDV 665
Query: 282 TGAGDCLVGGTLASISSGLDVMQSVAV 308
TGAGD +VG + SI + + QS+A+
Sbjct: 666 TGAGDSMVGCIIWSIINNQTLQQSMAI 692
>gi|432862967|ref|XP_004069961.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Oryzias latipes]
Length = 685
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 47/305 (15%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A+ +S+LG P ISA G D + + + K ++T G+ R + +TA
Sbjct: 386 FGGVGRNIADSLSRLGQAPLFISATGCDANSDAVFNYCKH--MNTSGVARLEGHNTATYC 443
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ +GEL+ + ++ I + +T +++ QF +SSA+++ +D N+ + C +A
Sbjct: 444 VVISESGELSFGLGDMD-IHQHITENYVSQFEKQVSSAALVCLDGNIPVSTINYICSLAK 502
Query: 125 ECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ NI VW+EP V ++ + +T K ++ SPN EL M L I
Sbjct: 503 KHNINVWYEPTDVERASKPFLTDAWKSLSYSSPNMAELCNMNKTLG-------IATPDVL 555
Query: 183 AESLFQTLKPAILV---LLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSR 239
SL + L A+ + LLE + +V+TLGS+GVLLC + S+ + LRK K
Sbjct: 556 PTSLSEILHVAVSLSRPLLEH-LHCLVVTLGSNGVLLCGEHSADSVNLQLRKQKKK---- 610
Query: 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASI 296
Q AVH+PAL P V ++GAGD G +A I
Sbjct: 611 ------------------------RQLCAVHYPALNVSPEETVNVSGAGDSFAGALIAGI 646
Query: 297 SSGLD 301
G D
Sbjct: 647 IQGKD 651
>gi|94536980|ref|NP_001035392.1| uncharacterized protein LOC678543 [Danio rerio]
gi|92098315|gb|AAI15295.1| Zgc:136858 [Danio rerio]
Length = 700
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 41/301 (13%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A+C+S+LG KP ISA+G D + +L + K + T + R +D TA
Sbjct: 385 FGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTSAVARLQDQRTATYC 442
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ +GEL+ + ++ I + + ++ QF+ +SSAS++++D N+ + C+IA
Sbjct: 443 AVITESGELSLGLGDMD-IHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAK 501
Query: 125 ECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ +PVWFEP K+ + ++ K + SPN EL M + L + P + +
Sbjct: 502 KHAVPVWFEPTDADKACKPFLSESWKALAFTSPNLTELCTMNHTL---GLPTPAELPRSL 558
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
+ L PA+ L + + VV+TLGS GVL+C + ++ + RK K
Sbjct: 559 EDVL--GCAPALSRPLLEHLHCVVVTLGSLGVLVCGEHEAGTVNLQPRKQKRK------- 609
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGDCLVGGTLASISSG 299
++ AVH+PAL S V ++GAGD G + I G
Sbjct: 610 ---------------------ARLCAVHYPALTLSSEETVNVSGAGDSFAGAMMVGILQG 648
Query: 300 L 300
L
Sbjct: 649 L 649
>gi|66828413|ref|XP_647561.1| hypothetical protein DDB_G0268118 [Dictyostelium discoideum AX4]
gi|60475577|gb|EAL73512.1| hypothetical protein DDB_G0268118 [Dictyostelium discoideum AX4]
Length = 765
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 154/305 (50%), Gaps = 46/305 (15%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV RNVAE +S+L IS +G D+ +L+E ++ LS+ G+ + TA+ +
Sbjct: 476 MGGVGRNVAEVLSRLQMNSLFISLVGDDVHSGLLMESFQKMNLSSNGVGIKVGSKTAIYN 535
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ G+LA A+A ++ ++ +TP +I +F ++S+ +L+ D N+ ++ +++
Sbjct: 536 AIMNDRGDLAVAIAQMDIFDE-ITPSYISKF--DLTSSKLLVFDGNIPIESMTYLAQLSR 592
Query: 125 ECNIPVWFEPVSVTKSRRITS--VVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
I +WFEP SV KS +I ++ IT +SPN DEL+ ++N + + + + + +
Sbjct: 593 SKGIKLWFEPTSVYKSSKIVESFILSSITYISPNRDELIKISNEIIKKGLIKFENIINND 652
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
L + +K ++L+E GI+ ++ +GS GVLL K
Sbjct: 653 INDL-ENIKKHSIILIESGIKYIITKMGSKGVLLAYK----------------------- 688
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLD 301
+ G +F P +P + +V +TGAGD LVG T+ SI G +
Sbjct: 689 ----------------KDDGEFKFELFSAPEVPDNKIVDVTGAGDSLVGCTIYSILLGHN 732
Query: 302 VMQSV 306
+ ++
Sbjct: 733 LTTAI 737
>gi|340372639|ref|XP_003384851.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Amphimedon queenslandica]
Length = 682
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++ P ++S +G D G + +ST GI ++ TA
Sbjct: 387 GGVGRNIAEYLARRDCNPLLVSVVGEDENGGKIKRRLTELKMSTRGILVKEGASTASYCV 446
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ +GE+ + +E I K LT DW++QF S L DAN+ + C ++
Sbjct: 447 VLEESGEVHCGIGDLE-INKHLTVDWVKQF--STVPPSFLCFDANIPIHVITYICNTFSQ 503
Query: 126 CNIPVWFEPVSVTKS-RRITS-VVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
N P+WFEP V S + ITS V+ IT SPN EL M N+L EN + N +
Sbjct: 504 YNTPIWFEPTCVRNSVKPITSGVIDKITYASPNLSELHCMHNSLV-ENEKQAPPLNVSNL 562
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
E + T+ LL G++ +++TLG+ G++ +K+ L + P G+
Sbjct: 563 EDIINTVLSLSDPLLYNGMQNLLVTLGTHGLMYVTKD-----EALLYPSAPSGY------ 611
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVM 303
P S++ ++GAGDCLVGG ++S+ G +
Sbjct: 612 -------------------------------PVSILNVSGAGDCLVGGVISSLLEGHSID 640
Query: 304 QSVAV 308
S+ +
Sbjct: 641 ASIKI 645
>gi|348513031|ref|XP_003444046.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Oreochromis niloticus]
Length = 1003
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 55/309 (17%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A+ +S+LG P ISA G D +++L K ++T G+ R K+ TA
Sbjct: 688 FGGVGRNIADSLSRLGQNPLFISATGADSNSDVVLNCCKH--MNTSGVARLKEHSTATYC 745
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ +GEL+ + ++ I + +T ++ QF +SSA+++ +D N+ + C A
Sbjct: 746 AVITESGELSLGLGDMD-IHQQITEHYVSQFKTQLSSATLVCLDGNIPTSTINYVCCFAE 804
Query: 125 ECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ NI VW+EP K+ + ++ K ++ SPN EL M L + +
Sbjct: 805 KHNINVWYEPTDSEKACKPFLSDAWKSLSYSSPNLAELCTMNKTLGVK-----------T 853
Query: 183 AESLFQTLKPAILV-------LLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
E L TL + V LLE + +V+TLG++GVLLC + ++ + RK K
Sbjct: 854 PEVLPSTLDEMLSVAVALSRPLLEH-LHCLVVTLGANGVLLCGEYDAGTVNLQPRKQK-- 910
Query: 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGT 292
Q A+H+PAL P ++ ++GAGD L G
Sbjct: 911 --------------------------KKRQLCALHYPALAVTPEEIMNVSGAGDSLAGAL 944
Query: 293 LASISSGLD 301
+A I G D
Sbjct: 945 MAGILLGKD 953
>gi|405976190|gb|EKC40706.1| hypothetical protein CGI_10020585 [Crassostrea gigas]
Length = 620
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 48/309 (15%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLD--MAGNILLEHWKSAG--LSTEGIRRQKDIDT 60
GGV RN+A+ +S LG + ISA+G D AG H + G L EG R T
Sbjct: 298 FGGVGRNLADGLSHLGVNAFFISAIGKDSHRAGFKAYCHHMNLGGVLEMEGHR------T 351
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A +L G+L + ++ I +TP++I+ F I A +L +D N++P A+ ++
Sbjct: 352 ATYCAVLQKGGQLLFGIGDMD-IHSQITPEYIQTFQSVIEGAKMLCIDGNMTPDAMRSAL 410
Query: 121 KIAAECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+IA N+PV+FEP + K+ + +V K++T+ +PN +EL +M L+G +D
Sbjct: 411 QIAQSKNVPVFFEPTDMYKANKPFQVNVGKFVTITTPNLNELRSMYKFLTGN-----LDS 465
Query: 179 NKHSAES---LFQTLKPAILV--LLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
H + L L IL+ ++ I V++TLG G+ LC + L + G+
Sbjct: 466 EHHGSFDDLPLNSLLMECILMCKVVTLHIPTVLVTLGKHGLALCQRHLAGTPNRGIPIKD 525
Query: 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTL 293
+ DLY S+ PA ++ ++GAGDCL +
Sbjct: 526 GSYLTVDLYPVPKSK-------------------------EPAKIISVSGAGDCLASAVI 560
Query: 294 ASISSGLDV 302
+ + G D+
Sbjct: 561 SGFTRGRDL 569
>gi|307181217|gb|EFN68914.1| Uncharacterized sugar kinase yeiC [Camponotus floridanus]
Length = 318
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 149/304 (49%), Gaps = 48/304 (15%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNVA+ + KLG +IS +G D G ++LE S G + +++ D++TA +
Sbjct: 21 GGVARNVADALIKLGLENTQLISVVGNDEYGKVILE---SLGTGGKIVKQMSDVNTARFT 77
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+DVNGE ++ VES +TP I+++ ++ AS++++D N L IA+
Sbjct: 78 VIVDVNGECQFCISEVESFTA-ITPKLIKEYQSYLEEASLIVLDGNPGLDTLRCVLDIAS 136
Query: 125 ECNIPVWFEPVSVTKSRRITSV----VKYITVVSPNEDELVAMANALS---GENMFRPID 177
+ N+PVW+EP + + +I + +SPN +EL + + ENM +
Sbjct: 137 QANVPVWYEPTDIQTATKIFEAGLEWRNVLHFISPNRNELKVIGKYFNISIPENM--DLT 194
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237
K+ AE L + I +V+ TLG GVL+ K L + +P+ +
Sbjct: 195 AVKNIAEQLLEY------------IPIVITTLGPQGVLVTRKGL---------QDEPF-Y 232
Query: 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
++ K +T+ +SR + A+ P + ++ ++G GDCL G ++ I
Sbjct: 233 DKN-GKLITNSSIASRL-----------YPALDIPEKSSEILSVSGCGDCLAAGIISGIH 280
Query: 298 SGLD 301
LD
Sbjct: 281 KNLD 284
>gi|392958632|ref|ZP_10324140.1| hypothetical protein A374_17839 [Bacillus macauensis ZFHKF-1]
gi|391875309|gb|EIT83921.1| hypothetical protein A374_17839 [Bacillus macauensis ZFHKF-1]
Length = 362
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 63/305 (20%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+ + GGV RN++E + +LGS +ISA+G D AG+I+LE AG+ T ++R T
Sbjct: 87 VSEMCGGVVRNISENLGRLGSNVSLISAVGKDKAGDIVLEKTAQAGVDTTQVKRLSQEAT 146
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ +LD G+LA A+A + +I + +T +I + HI+ A +++D N+ L
Sbjct: 147 GTYTALLDAKGDLAVAMADM-AIYEQMTIAFIEEKWSHIAHAEWMVLDTNIPEDTLHYCI 205
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
AA+ +IPV +PVS K++++ +K+I + PN +E A L+G PI+
Sbjct: 206 DRAAQESIPVVIDPVSSAKAKKLHQRLKHIHTILPNREE----AEVLAG----MPIN--- 254
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+ A +L G+R V++TLG DG + SK +
Sbjct: 255 -----AIADCEQAAQRMLRMGVRNVIITLGGDGAYVASKTVKQ----------------- 292
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
H P +VV +TGAGD G L +S
Sbjct: 293 -----------------------------HLPVQATTVVDVTGAGDAFSAGVLYGLSHNK 323
Query: 301 DVMQS 305
D++++
Sbjct: 324 DLLEA 328
>gi|410908421|ref|XP_003967689.1| PREDICTED: uncharacterized protein LOC101068240 [Takifugu rubripes]
Length = 663
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A+ +S+LG +P +ISA G D + + + + K +S G+ R + TA
Sbjct: 348 FGGVGRNLADSLSRLGLRPLLISATGADPSSDAVFKRCKHMDMS--GVARLQQQSTATYC 405
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+I+ +GE+ + ++ I + +T +++ QF +SSAS++ +D N+ + C IAA
Sbjct: 406 SIIAESGEMILGLGDMD-IHQQITEEYVSQFEQQLSSASLVCLDGNIPVSTMNYVCSIAA 464
Query: 125 ECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ N+ VWFEP K+R+ ++ K ++ SPN EL AM L F+ + S
Sbjct: 465 KHNLNVWFEPTDSDKARKPFLSDAWKALSYTSPNLAELRAMNETLG----FQTPEVLPSS 520
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
+ + LLE I +++TLG++G+L+C + S+ + R K
Sbjct: 521 PDEVLALAVVLARPLLEH-IHCLIVTLGANGLLVCGEHDGGSVNLHPRNQK--------- 570
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA---LPASVVRLTGAGDCLVGGTLASI 296
P + A+H+PA LP ++GAGD L G +A +
Sbjct: 571 ----------------RP---RKLCALHYPALTVLPEETANVSGAGDSLAGALIAGV 608
>gi|303277835|ref|XP_003058211.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460868|gb|EEH58162.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 118/249 (47%), Gaps = 35/249 (14%)
Query: 6 GGVARNVAECMSKLG----SKPYMISALGLDMAGNILLEHWKS--AGLSTEGIRRQKDID 59
GGV RNVAE +S+ + P +++A+G D+ G L+ W+ S++G+R
Sbjct: 75 GGVGRNVAEGVSRFAPSRAAPPLLVAAVGDDVGGRALVAAWRDLPGRPSSDGVRVCAGET 134
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T VVS ++D GE+AAA+AS +E L W+R+ + A V++VD N++P +AA+
Sbjct: 135 TPVVSAVIDETGEVAAAIASTTLVETGLDATWLRRHRDALRRARVVVVDGNVAPDVVAAA 194
Query: 120 CKIAAECNIP------------VWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMAN 165
+ VWFEPVS K+ R V+ VVSPN EL AMA+
Sbjct: 195 TAFRDDVTPRRASSSSSPSPPLVWFEPVSAAKATRAGRAGVLHRCDVVSPNARELRAMAD 254
Query: 166 ALSGENMFRPIDR-NKHSAESL--------------FQTLKPAILVLLEKGIRLVVLTLG 210
E P R + E L ++ LL +G+ V LTLG
Sbjct: 255 DARRERRGEPPPRLSASGGEDLDLDHEAADADVALAAARAHEDVVALLREGVGTVALTLG 314
Query: 211 SDGVLLCSK 219
GVLLC K
Sbjct: 315 PLGVLLCRK 323
>gi|302836383|ref|XP_002949752.1| hypothetical protein VOLCADRAFT_90096 [Volvox carteri f.
nagariensis]
gi|300265111|gb|EFJ49304.1| hypothetical protein VOLCADRAFT_90096 [Volvox carteri f.
nagariensis]
Length = 557
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 1 VNYVLGGVARNVAECMSKL----GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQK 56
+ V GGV RN+AE +S L P +S +G D AG+ L + L +
Sbjct: 69 IRQVPGGVGRNMAEALSGLVPLDRPAPVFVSLVGDDTAGSFLTTFLRRLRLDLSQLITLP 128
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
T VS +LD GE+AA VA V ++E+ LTP+ +R+ I A +L+ + NLS AL
Sbjct: 129 GATTPCVSAMLDRGGEVAACVADVTAVERHLTPERLRECQPQIQQACMLLAEGNLSAEAL 188
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
+ AA +PV+ EPVSV K+ R+ S + Y T VSPN EL++MA+ +
Sbjct: 189 EYISRTAALARVPVFLEPVSVPKATRLVSALPYATFVSPNAAELISMADEGAPGGRHGGR 248
Query: 177 DRNKHSAESLFQTLKPA----------ILVLLEKGIRLVVLTLGSDGVLL 216
L+P VLL +G VVLTLGS G L
Sbjct: 249 SGFGGGGGDGRVVLEPVAELLRQLAAFAEVLLLQGTSCVVLTLGSLGAAL 298
>gi|302547979|ref|ZP_07300321.1| PfkB family kinase [Streptomyces hygroscopicus ATCC 53653]
gi|302465597|gb|EFL28690.1| PfkB family kinase [Streptomyces himastatinicus ATCC 53653]
Length = 373
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 62/299 (20%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE +++LG+ ++I+A+G D AG LL ++ G+ + + R T +
Sbjct: 82 GGVARNVAENLARLGTPTHLIAAVGQDPAGERLLSETQATGVRIDHVHRCAQ-PTGTYTA 140
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GELA AVA + + + L P+ ++ I +AS+L++D NLS ALA + IA+
Sbjct: 141 VLDADGELAVAVADMAATDG-LGPEHLQPARELIGNASMLVLDGNLSSSALAYALDIASA 199
Query: 126 CNIPVWFEPVSVTKSRRITSVV---KYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ +PVSV K+ + ++ + + V+PN EL AL+G + FR I ++
Sbjct: 200 AGVQTVIDPVSVPKAALLAPLLAAGRPVFAVTPNVAEL----GALTGRDTFRDISQD--- 252
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
Q L A+ VL E+G++ V + LG G LL
Sbjct: 253 -----QELTEAVAVLHERGVQYVWVRLGERGSLL-------------------------- 281
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
SGA E G F A PA V +TGAGD ++GG + ++ +G D
Sbjct: 282 ------------SGAEE---GVTFLD----APPAEVQDVTGAGDAMLGGFVHALLTGED 321
>gi|301624738|ref|XP_002941658.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Xenopus (Silurana) tropicalis]
Length = 696
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 153/306 (50%), Gaps = 41/306 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+ GGV RN+A+C+ +LG+KP ISALG D N ++ H+ S + G+ R K +T
Sbjct: 366 VHQSFGGVGRNLADCLCRLGAKPLFISALGQDDHANSVM-HYCSH-MDMGGVARLKGHNT 423
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A ++ GEL+ + ++ I + +T +++ QF ++ A ++ +D N+ + C
Sbjct: 424 ATYCAVISGTGELSLGLGDMD-IHQQITENYVSQFADCLAQARLVCIDGNIPLSTIQYVC 482
Query: 121 KIAAECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
++ +PV FEP KS + ++ ++ +SPN EL+ + AL G + + + R
Sbjct: 483 GLSRRHGVPVCFEPTDEDKSCKPFLSDSWTALSFISPNLKELIGINRAL-GYPVPQELPR 541
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238
+ TL + LLE + V++TLG++GVLLC ++ +GL+
Sbjct: 542 ALDDTLDMALTLS---VPLLEH-LACVIVTLGANGVLLCGHSHRGTLSLGLK-------- 589
Query: 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGDCLVGGTLAS 295
++ H+ + AV++PA P + +V ++GAGD + G L+
Sbjct: 590 --------TKIHT------------GEMCAVYYPAAPVAAEEIVNVSGAGDSFMAGLLSG 629
Query: 296 ISSGLD 301
+ + LD
Sbjct: 630 VLAQLD 635
>gi|320335446|ref|YP_004172157.1| PfkB domain-containing protein [Deinococcus maricopensis DSM 21211]
gi|319756735|gb|ADV68492.1| PfkB domain protein [Deinococcus maricopensis DSM 21211]
Length = 368
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 21/217 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE +++LG ++SA+G D G LL+ +++G+ I R D T S
Sbjct: 95 GGVARNIAENLARLGVPTGLLSAIGHDDTGARLLDATRASGVDVSPIVRTDDP-TGTYSA 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
ILD +GEL AVAS+ +++ LTPD IR I AS ++VD N+ L + + A
Sbjct: 154 ILDPHGELILAVASMRAVDA-LTPDVIRTRRALIDRASAVIVDCNVPQDTLLHAARTAQA 212
Query: 126 CNIPVWFEPVSVTKSRRITSVVKY---ITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ P++ EPVSV K+ R+ +++ + V+PN DEL A+ DR+ +
Sbjct: 213 SHTPLYVEPVSVPKAARLRALLAEGLPVHAVTPNRDELAAL------------TDRDTRT 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ L A+ L +G+R+V + LG G LL +
Sbjct: 261 DDGLHA----AVQDLHARGVRVVWVRLGEAGSLLSAD 293
>gi|156364292|ref|XP_001626283.1| predicted protein [Nematostella vectensis]
gi|156213154|gb|EDO34183.1| predicted protein [Nematostella vectensis]
Length = 627
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 148/310 (47%), Gaps = 42/310 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+AE +S+LG KP +SA+G D G +LL H + L GI+ + +T
Sbjct: 305 VRMSFGGVGRNIAEGLSRLGMKPVFVSAVGGDSLGALLLRHCEEFRL--RGIQTFQQCET 362
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
S I+ +G AAV +E I ++ + I + I +A +++VDAN+S L
Sbjct: 363 GTYSAIISEDGSFHAAVGDME-IHDKISQEMIAGYEESIKNAPIVVVDANVSRSGLDYVL 421
Query: 121 KIAAECNIPVWFEPVSVTKSR--RITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+ +E +IPVWFEP + K+ T K+IT SPN EL M++A + R
Sbjct: 422 NLCSEQSIPVWFEPTCIMKAGIPFETDCWKHITYASPNLKELRTMSDAAVKHHKLPRHPR 481
Query: 179 ---------NKHSAESLFQTLKPAILVL--LEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227
+ S+ +L ++ +L+ L I +V+TLG +GVL+
Sbjct: 482 FGENSEAVASSDSSRNLDDIIEECLLLAQPLLAHIHCLVVTLGKNGVLV----------- 530
Query: 228 GLRKTKPYGFSRDL-YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGD 286
LR T + DL + + + + + G + AVH+PA V+ +TGAGD
Sbjct: 531 -LRDT-----TADLPFPSKKNPRIPAMHHGLVS--------AVHYPAPDVHVINVTGAGD 576
Query: 287 CLVGGTLASI 296
+ + SI
Sbjct: 577 SMTAAMVMSI 586
>gi|119718839|ref|YP_925804.1| ribokinase-like domain-containing protein [Nocardioides sp. JS614]
gi|119539500|gb|ABL84117.1| PfkB domain protein [Nocardioides sp. JS614]
Length = 369
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 21/216 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG++ ++++A+G D G+ +L +AG+ E +RR T +
Sbjct: 95 GGVGRNIAENLARLGTRTHLVAAIGSDALGDQVLAATSNAGVVVEHVRRSAR-STGTYTA 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GEL AVA + + ++ L PD + +S+AS++++D NLS L + +AAE
Sbjct: 154 VLDADGELVVAVADMAATDELL-PDQVAAARDLVSAASLVVLDGNLSTGTLRYALDLAAE 212
Query: 126 CNIPVWFEPVSVTKSRRITSVV---KYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
V +PVSV K+ + +V + + V+PN DEL A+ + + R +
Sbjct: 213 VGTRVLLDPVSVPKAAALAPLVTVDRPVFTVTPNRDELAALTDLPT---------RTRRQ 263
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
E+ + L ++G++LV + LG G LL S
Sbjct: 264 QEAAARALH-------DRGVQLVWVRLGPAGSLLSS 292
>gi|363728097|ref|XP_416348.3| PREDICTED: uncharacterized protein LOC418114 [Gallus gallus]
Length = 702
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 47/310 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+A+C+S+LG P +SA+G D +L + +S I + + T
Sbjct: 381 VRRTFGGVGRNLADCLSRLGLTPLFLSAVGKDEHSESILHYCHHMDMS--AILQLEGKST 438
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A S ++ GEL+ + ++ I + +T ++ QF ++ A ++ +D N+ + C
Sbjct: 439 ATYSAMITSAGELSIGLGDMD-IHQQITEQYVSQFKENLCRAPLVCIDGNVPLSTIQYIC 497
Query: 121 KIAAECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVA----MANALSGENMFR 174
++A + + V +EP K+ + ++ K +T +SPN EL A + N L E R
Sbjct: 498 QLARDHQLAVCYEPTDENKASKPFLSDSWKALTYISPNLQELKAINRTLGNPLPAEAPSR 557
Query: 175 PIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
D K +A A+ L + VV+TLG+ GVLLC + L S+ + + P
Sbjct: 558 LEDIIKMAA---------ALARPLLSHLCCVVVTLGAHGVLLCGRSLGGSISL---RPAP 605
Query: 235 YGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGDCLVGG 291
+ E + A H+PA+P S +V ++GAGD L+ G
Sbjct: 606 H-----------------------EQTAAASLCATHYPAIPISREEIVNVSGAGDSLMAG 642
Query: 292 TLASISSGLD 301
A + + D
Sbjct: 643 IAAGMLANHD 652
>gi|159899984|ref|YP_001546231.1| ribokinase-like domain-containing protein [Herpetosiphon
aurantiacus DSM 785]
gi|159893023|gb|ABX06103.1| PfkB domain protein [Herpetosiphon aurantiacus DSM 785]
Length = 312
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 111/198 (56%), Gaps = 5/198 (2%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE +++LG++ +I+A+G D G ++++ + AG+ T+ + +D +A
Sbjct: 42 VGGVARNIAENLARLGAQSSLIAAVGNDEFGRLIIQQTEDAGVDTDAMMILEDQHSAAYL 101
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD NG L A+ + LTPD+I + + +A + +DANL+ +I A
Sbjct: 102 ALLDRNGLLYTALDD-SHCARALTPDYIYDNVQLLRAADAVFIDANLARATADVILQICA 160
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E +IPV FEPV+ + R ++ + +++PNE E A AL+G + P + + E
Sbjct: 161 EEDIPVCFEPVAYGLAGRYRDRLRGMYLITPNERE----AEALTGLPVTSPAEATAAAKE 216
Query: 185 SLFQTLKPAILVLLEKGI 202
+ ++ AI+ L +G+
Sbjct: 217 LVRLGVEIAIITLAREGL 234
>gi|326329358|ref|ZP_08195683.1| carbohydrate kinase, PfkB family [Nocardioidaceae bacterium
Broad-1]
gi|325952933|gb|EGD44948.1| carbohydrate kinase, PfkB family [Nocardioidaceae bacterium
Broad-1]
Length = 315
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 66/302 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RNVAE +++LG ++S +G D G+ ++ + + G+ +RR+ D+ T +
Sbjct: 45 GGVGRNVAENLARLGDSVALVSVVGDDPIGDEVISYTEDVGVDCTYVRRRADVRTGTYNA 104
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GEL AVA + + ++F +P + I +A ++V+ N+ + +A E
Sbjct: 105 VLDSSGELVVAVADMAATDEF-SPLVVEAARDMIRTARGVLVEGNIPVRTAEVAIDLAHE 163
Query: 126 CNIPVWFEPVSVTKSRRITSVV---KYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
++PV F+PVSV K+RR ++ + + +V+PN+ EL A+ + SG + I++ HS
Sbjct: 164 FDVPVVFDPVSVPKARRARDLIRADRELYLVTPNQAELAALTDLPSGTDA--EIEKAVHS 221
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
L ++G+ +V + LG+ G ++ D+Y
Sbjct: 222 --------------LHDRGVGVVWVRLGARGSVISYN--------------------DIY 247
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
+ PA+P V+ +TGAGD ++ + +D+
Sbjct: 248 Q--------------------------ELPAVPTEVIDVTGAGDAMLAAFTHELLRDVDL 281
Query: 303 MQ 304
++
Sbjct: 282 VE 283
>gi|398818594|ref|ZP_10577178.1| sugar kinase, ribokinase [Brevibacillus sp. BC25]
gi|398027353|gb|EJL20907.1| sugar kinase, ribokinase [Brevibacillus sp. BC25]
Length = 366
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 63/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG +I+++G D G LL+ K G+ + R T +
Sbjct: 92 GGVARNIAENLGRLGCNTSLITSIGEDKEGEWLLQETKKHGVHISQVWRLPTQRTGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD++GE+ ++A+++ I LTP+ + HI++A V+ +D N+ LA + E
Sbjct: 152 LLDIDGEMVVSLANMD-IYDALTPEMFAEKWSHIAAAHVIFIDTNIPADCLAYIIERCRE 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI ++ +PVS K++++ + + + PN +E MA I + AE+
Sbjct: 211 ENILLFVDPVSSIKAKKLPQQLDGVEAILPNREEAELMAGM--------KITTIEECAEA 262
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ + E+G++ V++TLG +G+ S+++ M PY
Sbjct: 263 CRK--------IRERGVKHVIVTLGEEGIYYQSEDVEEHM-------SPY---------- 297
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
P VV +TGAGD G L I +G
Sbjct: 298 -----------------------------PTEVVDVTGAGDAFASGILYGIVNG 322
>gi|308798881|ref|XP_003074220.1| ankyrin repeat domain protein (ISS) [Ostreococcus tauri]
gi|116000392|emb|CAL50072.1| ankyrin repeat domain protein (ISS), partial [Ostreococcus tauri]
Length = 835
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 133/295 (45%), Gaps = 62/295 (21%)
Query: 34 AGNILLEHW--KSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDW 91
A + LE W ++ G +G+R K TA V +LD +GE+AA VA VE +E+ + W
Sbjct: 484 ASHAALEEWSRRARGGGDDGVRIVKGGRTARVVAVLDGDGEIAACVADVEIVEEGVDSAW 543
Query: 92 IRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRI-------- 143
+ A +++D NL A+ ++A + N +W+EPVSV KS RI
Sbjct: 544 CASQANACRDARGMVLDGNLGQEAIETVKEMARKFNKWLWYEPVSVEKSTRILGGGVDDA 603
Query: 144 TSVVKYITVVSPNEDELVAMANAL-----SGENM----FRPIDRNKHSAESLFQTLKPAI 194
++ +T SPN EL +AN + G M F P + K+++E+L L +
Sbjct: 604 ARPLRGVTFCSPNAAELRELANGVRRGWAKGSPMSPCPFNPEFKFKNASEAL-DALASDV 662
Query: 195 LVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRY 254
+L G VVLTLG GV++ S
Sbjct: 663 CTVLAAGCEHVVLTLGPLGVVVSSA----------------------------------- 687
Query: 255 SGAMEPAGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307
P+ G S+ H PA+ A VV L GAGD LVGG + +++ G ++ ++A
Sbjct: 688 -----PSDGEVSRATHTHVPAVRADVVSLVGAGDALVGGAVGALAEGASLLIAIA 737
>gi|189237583|ref|XP_975001.2| PREDICTED: similar to CG2794 CG2794-PA [Tribolium castaneum]
Length = 367
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 67/322 (20%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+ E +SKLG + IS LG D GNIL L+ G++ + T +
Sbjct: 69 GGVARNICESLSKLGYRSVFISVLGDDPQGNILKNFIPKDHLA--GVKVLQGRSTGQCTI 126
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD NGE +E I + LTP+ I + I A +++ DANLS P + +A
Sbjct: 127 VLDRNGECKFLAGDME-IHQHLTPEMILENQEAIKKAPLIIFDANLSLPTIETILGLAQS 185
Query: 126 CNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
NIPV FEP + S + T + + V++PN +EL +A L +N R
Sbjct: 186 HNIPVLFEPTDLEVSIKPFQTEFWRAVKVITPNFNELKHIAEVLKIKNRER--------- 236
Query: 184 ESLFQTLKPAILVLLEKGIRL---VVLTLGSDGVLLCSK-----ELLSSM--RIGLRKTK 233
+++ ++ + K + V++TLG+DGV++ K LSS +IG+R
Sbjct: 237 ---YESKLDEVIDIAGKLVSFVDNVIVTLGADGVVVARKGEATDPFLSSRSGQIGIRH-- 291
Query: 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTL 293
YK + S+ +V ++GAGD L G +
Sbjct: 292 --------YKVIRSK----------------------------NVASVSGAGDNLASGII 315
Query: 294 ASISSGLDVMQ--SVAVDDAKT 313
A + GL + S+ ++ AKT
Sbjct: 316 AGMLEGLSEEECLSIGLEAAKT 337
>gi|270006919|gb|EFA03367.1| hypothetical protein TcasGA2_TC013352 [Tribolium castaneum]
Length = 302
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 149/335 (44%), Gaps = 71/335 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+ E +SKLG + IS LG D GNIL L+ G++ + T +
Sbjct: 4 GGVARNICESLSKLGYRSVFISVLGDDPQGNILKNFIPKDHLA--GVKVLQGRSTGQCTI 61
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD NGE +E I + LTP+ I + I A +++ DANLS P + +A
Sbjct: 62 VLDRNGECKFLAGDME-IHQHLTPEMILENQEAIKKAPLIIFDANLSLPTIETILGLAQS 120
Query: 126 CNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
NIPV FEP + S + T + + V++PN +EL +A L +N R
Sbjct: 121 HNIPVLFEPTDLEVSIKPFQTEFWRAVKVITPNFNELKHIAEVLKIKNRER--------- 171
Query: 184 ESLFQTLKPAILVLLEKGIRL---VVLTLGSDGVLLCSK-----ELLSSM--RIGLRKTK 233
+++ ++ + K + V++TLG+DGV++ K LSS +IG+R
Sbjct: 172 ---YESKLDEVIDIAGKLVSFVDNVIVTLGADGVVVARKGEATDPFLSSRSGQIGIRH-- 226
Query: 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTL 293
YK + S+ +V ++GAGD L G +
Sbjct: 227 --------YKVIRSK----------------------------NVASVSGAGDNLASGII 250
Query: 294 ASISSGLDVMQ--SVAVDDAKTVYAA----ANVLF 322
A + GL + S+ ++ AKT A+ LF
Sbjct: 251 AGMLEGLSEEECLSIGLEAAKTALTTSRPVADTLF 285
>gi|194758595|ref|XP_001961547.1| GF15023 [Drosophila ananassae]
gi|190615244|gb|EDV30768.1| GF15023 [Drosophila ananassae]
Length = 700
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 35/306 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL ISA+G D G LL+ A GI Q + T++ S
Sbjct: 383 GGVGRNIAEGIYKLHGDVNFISAVGNDHMGECLLKMMPQA--LQRGILVQDNQATSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D G+ + ++E I + +TP+ ++ + A ++++D+N+S A+ + + A E
Sbjct: 441 MFDKFGDCKIILGNME-IHQTITPETLQPYHEFFCDAPIIVMDSNISEQAMTSILQQAEE 499
Query: 126 CNIPVWFEPVSVTKSRR----ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
PV+FEP ++ + + + K I ++ PN EL +A ++GE + +D +K
Sbjct: 500 HKTPVFFEPTDMSIAGKPFKLAPELTKNIRLIKPNIHELKTIAEVITGETIKGKLD-SKL 558
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
S E L Q K +++ ++++ ++ TLG+ GVLL ++ +S L + G
Sbjct: 559 SREQLLQQAK-SLIKMIDRHFNCIIATLGNHGVLLSYRQDANSDAHLLLDVESSGSP--- 614
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
H +R+ A P + ++V ++GAGD G ++++ G D
Sbjct: 615 --------HCTRFYAA--------------PKV-KNIVNVSGAGDSFCAGFISTLLHGRD 651
Query: 302 VMQSVA 307
+ VA
Sbjct: 652 LDHCVA 657
>gi|254478502|ref|ZP_05091878.1| kinase, pfkB family [Carboxydibrachium pacificum DSM 12653]
gi|214035591|gb|EEB76289.1| kinase, pfkB family [Carboxydibrachium pacificum DSM 12653]
Length = 378
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 118/223 (52%), Gaps = 21/223 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L +S +G D G LLE + AG++ E + T
Sbjct: 103 INIAPGGVGRNIAHNLAQLNVPVTFLSVVGNDDEGRRLLEETRQAGVNVEQVVISNTRRT 162
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ I ++ +++ DAN+ ++
Sbjct: 163 GIYLAILNAIGDMDIALSGMDILEE-LNIQYLESKTEVIKNSEIVVFDANIPEESIRYIT 221
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMA--NALSGENMFRPIDR 178
++ NIPV EPVS+ K++++ +V+ I ++PN++EL ++ N L+ E+M
Sbjct: 222 ELCYNNNIPVVVEPVSIDKAKKLKNVLDKIDYITPNKEELESITEINILNDEDM------ 275
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
K A+ L +KGI+ V++TLG GV + S+EL
Sbjct: 276 ------------KKAVKYLRDKGIKNVIVTLGERGVYVSSEEL 306
>gi|226309958|ref|YP_002769852.1| hypothetical protein BBR47_03710 [Brevibacillus brevis NBRC 100599]
gi|226092906|dbj|BAH41348.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 362
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 63/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG +I+++G D G LL+ K G+ + R T +
Sbjct: 88 GGVARNIAENLGRLGCNTSLITSVGEDKEGEWLLQETKKHGVHISQVWRLPTQRTGTYTA 147
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD++GE+ ++A+++ I LTP+ + HI++A V+ +D N+ LA + E
Sbjct: 148 LLDIDGEMVVSLANMD-IYDALTPEMFAEKWSHIAAAHVVFIDTNIPADCLAYIIERCRE 206
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI ++ +PVS K++++ + + + PN +E MA I + AE+
Sbjct: 207 ENILLFVDPVSSIKAKKLPQQLDGVEAILPNREEAELMAGM--------KITTIEECAEA 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ + E+G++ V++TLG +G+ S+++ M PY
Sbjct: 259 CRK--------IREQGVKHVIVTLGEEGIYYQSEDVEEHML-------PY---------- 293
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
P VV +TGAGD G L I +G
Sbjct: 294 -----------------------------PTEVVDVTGAGDAFASGLLYGIVNG 318
>gi|345011522|ref|YP_004813876.1| PfkB domain-containing protein [Streptomyces violaceusniger Tu
4113]
gi|344037871|gb|AEM83596.1| PfkB domain protein [Streptomyces violaceusniger Tu 4113]
Length = 378
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 16/216 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE +++LG+ ++I+A+G D AG LL ++AG+ + + R T +
Sbjct: 95 GGVARNVAENLARLGTPTHLIAAVGQDAAGERLLTETQAAGVRIDHVHRGPH-PTGTYTA 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +G+L A+A + + + L+P+ + I A +L++D NLSP L+ IAA
Sbjct: 154 VLDADGDLVVAIADMAATDA-LSPEHLHAARELIGHAGLLVLDGNLSPRVLSYVLDIAAA 212
Query: 126 CNIPVWFEPVSVTKSRRITSVV---KYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ +PVSV K+ + + + + V+PN EL AL+G ++
Sbjct: 213 TGVQTLIDPVSVPKAALLAPLFATGRPVFAVTPNVAEL----GALTGRDLDE-------D 261
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
A + L A+ VL E+G+R V + LG+ G LL +
Sbjct: 262 AAADDPELIRAVAVLHERGVRHVWVRLGARGSLLST 297
>gi|297543849|ref|YP_003676151.1| MarR family transcriptional regulator [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841624|gb|ADH60140.1| transcriptional regulator, MarR family [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 367
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 90 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ I I ++ +++ D N+ ++
Sbjct: 150 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKIEVIKNSEIVVFDTNIPEDSIKYIV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ V+ I V+PN++EL ++SG + D
Sbjct: 209 ELCYNNNIPVVAEPVSIDKAKKLIGVLDKIDYVTPNKEEL----ESISGVKIANDED--- 261
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+K A+ L +KGI+ V++TLG GV + S+E+
Sbjct: 262 ---------MKKAVKYLRQKGIKNVIVTLGERGVYISSEEV 293
>gi|300723013|ref|YP_003712309.1| sugar kinase [Xenorhabdus nematophila ATCC 19061]
gi|297629526|emb|CBJ90129.1| putative sugar kinase with ribokinase-like domain [Xenorhabdus
nematophila ATCC 19061]
Length = 362
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 133/301 (44%), Gaps = 64/301 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG++ Y+IS +G D G LLE K AG+ T+ + +T+ ++
Sbjct: 93 GGVGRNIAHNIALLGNESYLISVVGDDFYGRTLLEQTKLAGVYTDYFHKISSENTSTYNS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D GE+ AV + +EK LTP + Q I +A VL+VD NL+ AL A
Sbjct: 153 LIDERGEMRVAVNDMGILEK-LTPALLSQSKILIQNAGVLIVDCNLTEDALEWLFSNAG- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV+ + VS K+ +I + +I + PN E A LSG + D + S
Sbjct: 211 -NIPVFVDTVSTFKATKIRHWLSHIHTLKPNRLE----AEMLSGIKITTLSDAS--DTAS 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
F ++G++ + L++G++GV
Sbjct: 264 WFH----------QQGVQRLALSMGTEGV------------------------------- 282
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
Y ME GG PA+P +++ GAGD ++ G G+ +S
Sbjct: 283 --------YYSEMEGYGGCS------PAIPVNIINANGAGDAMMAGLAHCWLEGMTWAES 328
Query: 306 V 306
+
Sbjct: 329 I 329
>gi|20806843|ref|NP_622014.1| ribokinase family sugar kinase [Thermoanaerobacter tengcongensis
MB4]
gi|20515311|gb|AAM23618.1| Sugar kinases, ribokinase family [Thermoanaerobacter tengcongensis
MB4]
Length = 365
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 116/223 (52%), Gaps = 21/223 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L +S +G D G LLE + AG++ E + T
Sbjct: 90 INIAPGGVGRNIAHNLAQLNVPVTFLSVVGNDDEGRRLLEETRQAGVNVEQVVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ I ++ +++ DAN+ ++
Sbjct: 150 GIYLAILNAIGDMDIALSGMDILEE-LNIQYLESKTEVIKNSEIVVFDANIPEESIRYIT 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMA--NALSGENMFRPIDR 178
++ NIPV EPVS+ K++++ +V+ I ++PN++EL ++ L E+M
Sbjct: 209 ELCYNNNIPVVVEPVSIDKAKKLKNVLDKIDYITPNKEELESITEIKILDDEDM------ 262
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
K A+ L +KGI+ V++TLG GV + S+EL
Sbjct: 263 ------------KKAVKYLRDKGIKNVIVTLGERGVYVSSEEL 293
>gi|256751073|ref|ZP_05491955.1| PfkB domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749979|gb|EEU63001.1| PfkB domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 380
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 103 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 162
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 163 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 221
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ SV+ I V+PN++EL ++SG + D
Sbjct: 222 ELCYNNNIPVVAEPVSIDKAKKLKSVLDKIDYVTPNKEEL----ESISGVKIANDED--- 274
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+K + L +KGI+ V++TLG GV + S+E+
Sbjct: 275 ---------MKKGVKYLRQKGIKNVIVTLGERGVYISSEEV 306
>gi|300913484|ref|ZP_07130801.1| transcriptional regulator, MarR family [Thermoanaerobacter sp.
X561]
gi|307723501|ref|YP_003903252.1| MarR family transcriptional regulator [Thermoanaerobacter sp. X513]
gi|300890169|gb|EFK85314.1| transcriptional regulator, MarR family [Thermoanaerobacter sp.
X561]
gi|307580562|gb|ADN53961.1| transcriptional regulator, MarR family [Thermoanaerobacter sp.
X513]
Length = 367
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 65/304 (21%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 90 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 150 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ SV+ I V+PN++EL ++SG + D
Sbjct: 209 ELCYNNNIPVVAEPVSIDKAKKLKSVLDKIDYVTPNKEEL----ESISGVKIANDED--- 261
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+K A+ L +KG++ V++TLG GV + S E + KPY
Sbjct: 262 ---------MKKAVKHLRQKGVKNVIVTLGERGVYISSAEFEKFI-------KPY----- 300
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG- 299
A +V TGAGD L G + I +G
Sbjct: 301 ----------------------------------DAEIVDATGAGDALTAGLVYGIFNGY 326
Query: 300 -LDV 302
LDV
Sbjct: 327 PLDV 330
>gi|289577543|ref|YP_003476170.1| MarR family transcriptional regulator [Thermoanaerobacter italicus
Ab9]
gi|326390263|ref|ZP_08211823.1| transcriptional regulator, MarR family [Thermoanaerobacter
ethanolicus JW 200]
gi|392939078|ref|ZP_10304722.1| sugar kinase, ribokinase [Thermoanaerobacter siderophilus SR4]
gi|289527256|gb|ADD01608.1| transcriptional regulator, MarR family [Thermoanaerobacter italicus
Ab9]
gi|325993708|gb|EGD52140.1| transcriptional regulator, MarR family [Thermoanaerobacter
ethanolicus JW 200]
gi|392290828|gb|EIV99271.1| sugar kinase, ribokinase [Thermoanaerobacter siderophilus SR4]
Length = 367
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 90 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 150 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPKDSIKYIV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ V+ I V+PN++EL ++SG + D
Sbjct: 209 ELCYNNNIPVVAEPVSIDKAKKLIGVLDKIDYVTPNKEEL----ESISGVKIANDED--- 261
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+K A+ L +KG++ V++TLG GV + S+E+
Sbjct: 262 ---------MKKAVKYLRQKGVKNVIVTLGERGVYISSEEV 293
>gi|320116743|ref|YP_004186902.1| PfkB domain-containing protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|319929834|gb|ADV80519.1| PfkB domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 367
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 90 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 150 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ V+ I V+PN++EL ++SG + D
Sbjct: 209 ELCYNNNIPVVAEPVSIDKAKKLIGVLDKIDYVTPNKEEL----ESISGVKIANDED--- 261
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+K A+ L +KG++ V++TLG GV + S+E+
Sbjct: 262 ---------MKKAVKYLRQKGVKNVIVTLGERGVYISSEEV 293
>gi|167038926|ref|YP_001661911.1| ribokinase-like domain-containing protein [Thermoanaerobacter sp.
X514]
gi|166853166|gb|ABY91575.1| PfkB domain protein [Thermoanaerobacter sp. X514]
Length = 380
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 65/304 (21%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 103 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 162
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 163 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 221
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ SV+ I V+PN++EL ++SG + D
Sbjct: 222 ELCYNNNIPVVAEPVSIDKAKKLKSVLDKIDYVTPNKEEL----ESISGVKIANDED--- 274
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+K A+ L +KG++ V++TLG GV + S E + KPY
Sbjct: 275 ---------MKKAVKHLRQKGVKNVIVTLGERGVYISSAEFEKFI-------KPY----- 313
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG- 299
A +V TGAGD L G + I +G
Sbjct: 314 ----------------------------------DAEIVDATGAGDALTAGLVYGIFNGY 339
Query: 300 -LDV 302
LDV
Sbjct: 340 PLDV 343
>gi|167038342|ref|YP_001665920.1| ribokinase-like domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166857176|gb|ABY95584.1| PfkB domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
Length = 380
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 117/221 (52%), Gaps = 17/221 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E I T
Sbjct: 103 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQIVISNTRRT 162
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 163 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 221
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ NIPV EPVS+ K++++ V+ I V+PN++EL ++SG + D
Sbjct: 222 ELCYNNNIPVVAEPVSIDKAKKLIGVLDKIDYVTPNKEEL----ESISGVKIANDED--- 274
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+K A+ L +KG++ V++TLG GV + S+E+
Sbjct: 275 ---------MKKAVKYLRQKGVKNVIVTLGERGVYISSEEV 306
>gi|345016777|ref|YP_004819130.1| MarR family transcriptional regulator [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032120|gb|AEM77846.1| transcriptional regulator, MarR family [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 367
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 122/235 (51%), Gaps = 24/235 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A +++L ++S +G D G LLE + AG++ E + T
Sbjct: 90 INIAPGGVGRNIAHNLAQLSLPVTLLSVVGNDDEGRRLLEETRQAGVNVEQVVISNTRRT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ IL+ G++ A++ ++ +E+ L ++ + I ++ +++ D N+ ++
Sbjct: 150 GIYLAILNAIGDMDVALSGMDILEE-LNIQYLESKMEVIKNSEIVVFDTNIPEDSIKYIV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
++ + NIPV EPVS+ K++++ V+ I ++PN++EL +++ + EN
Sbjct: 209 ELCSNHNIPVVAEPVSIDKAKKLIGVLDKIDYITPNKEELESIS-EIKVEN--------- 258
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
+ +K A+ +L +KG++ V++TLG GV + + E M KPY
Sbjct: 259 ------DEDMKKAVKLLRQKGVKNVIVTLGERGVYISTAEFEKFM-------KPY 300
>gi|187932914|ref|YP_001887190.1| kinase, pfkB family [Clostridium botulinum B str. Eklund 17B]
gi|187721067|gb|ACD22288.1| kinase, pfkB family [Clostridium botulinum B str. Eklund 17B]
Length = 314
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ +GGV +N+A+ + KL Y+I+ G D G L E K + + + + +
Sbjct: 35 IKMTVGGVGQNIAQNLVKLDVPTYLITVYGDDYFGEFLAEECKKYDIHLDYAQCILNTSS 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + D +G++ AV ++ E +TP+++ + I I+ AS+ ++D N+S ++
Sbjct: 95 STYLYVADDHGDMVTAVNDMKITEN-ITPEFLEKRISFINGASICVLDGNISKESMEW-- 151
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A C +P++ +PVS+ K R +++ I PN E A+ALSG + ID
Sbjct: 152 -LANHCTVPIFVDPVSIAKVNRFENILDKIDTFKPNALE----ASALSG---IKIID--- 200
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ K A VL +KG++ V ++LG +G+ LCSKE
Sbjct: 201 ------IESAKEAAKVLHKKGVKNVFISLGENGI-LCSKE 233
>gi|290473503|ref|YP_003466372.1| sugar kinase [Xenorhabdus bovienii SS-2004]
gi|289172805|emb|CBJ79576.1| putative sugar kinase with ribokinase-like domain [Xenorhabdus
bovienii SS-2004]
Length = 357
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ L S+ + IS +G D G +L E K AG++ + + T++ ++
Sbjct: 95 GGVGRNIAQNIAALKSESHFISVVGNDYNGKVLFEQTKLAGVNIRYFHKLDEEKTSICNS 154
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D NG+ +V ++ +EK LTP + Q I ASVL++D NL+ AL A
Sbjct: 155 IIDENGKCIVSVNDMDIMEK-LTPTLLSQSEELIRRASVLVIDCNLTEGALEWLFNHAG- 212
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+P++ + VS K+ +I + YI + PN E A LSG + ++ A S
Sbjct: 213 -NVPIFIDTVSTFKATKIRHWLSYIHTLKPNRSE----AEILSGIEI--ETQKDAAIAAS 265
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
F ++G++ ++L++G++GV
Sbjct: 266 WFH----------QQGVQRLILSMGAEGV 284
>gi|198416252|ref|XP_002122082.1| PREDICTED: similar to CG2794 CG2794-PA [Ciona intestinalis]
Length = 685
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+AE + +L + P +ISALG D +L+ H K G+ T GI D T
Sbjct: 377 VQQSFGGVGRNIAETLWRLNNNPLLISALGSDYVAQLLMSHLK--GMDTSGISILPDHRT 434
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I + NGEL AV + I + + + + Q + I A ++ +DAN++ A+ C
Sbjct: 435 GAYNAIFNYNGELDLAVEDSD-IHRQINTEMVEQHVDSIIVAPMVCLDANIAYDAINFVC 493
Query: 121 KIAAECNIPVWFEPVSVTKSRR-------ITSVVKYITVVSPNEDELVAMANALS 168
+ + NIP+ EP K+ + T V+KY+T PN DEL A+ A++
Sbjct: 494 GVCNKHNIPLLLEPTGELKAAQGYMACGEYTDVIKYMT---PNVDELKAIYEAVT 545
>gi|328784565|ref|XP_395695.3| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Apis mellifera]
Length = 692
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 49/307 (15%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A + LG + +IS +G D G ++ KS G + + + +++TA +
Sbjct: 389 GGVGRNIANALISLGLNATRLISVVGNDQPGKAII---KSLGDGGQTVEQLSNMNTARCT 445
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D GE + +E ++P+ ++++ ++ ++S++++D NL + ++A
Sbjct: 446 TIIDYKGECRFGIGEMEVFTS-ISPNLVKKYQSYVENSSIIVLDGNLPLDTIQYLLELAT 504
Query: 125 ECNIPVWFEPVSVTKSRRITSV----VKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IPVW+EP V K+ +I + +SPN +EL+ + G+ + P+ NK
Sbjct: 505 YSKIPVWYEPTDVKKAMKIFEAKLQWQNVLHFISPNRNELLVI-----GKYLGIPVPDNK 559
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+ + + +K +I + K I +++ TLGS GVL+ K L P+ + +
Sbjct: 560 LTVD--LEEIK-SIAEQIAKFIPVIICTLGSHGVLVVRKAL---------GNDPF-YDKK 606
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL------PASVVRLTGAGDCLVGGTLA 294
V + +SR +P L P ++G GDCL G +
Sbjct: 607 GKLIVHNMSITSRL----------------YPPLSYVSDDPNETFNVSGCGDCLTSGIIY 650
Query: 295 SISSGLD 301
I LD
Sbjct: 651 GIHKNLD 657
>gi|339500160|ref|YP_004698195.1| PfkB domain-containing protein [Spirochaeta caldaria DSM 7334]
gi|338834509|gb|AEJ19687.1| PfkB domain protein [Spirochaeta caldaria DSM 7334]
Length = 635
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 47/259 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V + GG RN+AE +++L IS G D +LLE K+AG+ +G +
Sbjct: 289 VRFSRGGAGRNIAENLARLNIPVQFISVFGKDPLSRMLLEETKAAGVGLDGCLLVEADSP 348
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSA------------------ 102
+ +ILD G++ A++S++SI++ LTPD + + +S
Sbjct: 349 SCYLSILDETGDMKLALSSMDSIKR-LTPDVLEACLSALSDQTCAGDSAFDARSPSATGA 407
Query: 103 -------SVLMVDANLSPPALAASCKIAAEC-NIPVWFEPVSVTKSRRITS-----VVKY 149
S++++D NL P + A + C IPVWF+PVS+TK+R I S ++
Sbjct: 408 TSAGLVYSMVIIDGNLIPETIEA---LLDRCPGIPVWFDPVSITKARSIASYKGGALIGR 464
Query: 150 ITVVSPNEDELVAMANALS-GENMFRP---------IDRNKHSA--ESLFQTLKPAILVL 197
+ PN DEL A+A +L+ GE+ P I +HS+ + + A L
Sbjct: 465 FFGIKPNRDELFAIAESLNWGESKIIPKSIHQFIESISPQEHSSIPRRDLERILMASRFL 524
Query: 198 LEKGIRLVVLTLGSDGVLL 216
L+KG + + ++LG++GV++
Sbjct: 525 LDKGCQELHVSLGTEGVIV 543
>gi|188589215|ref|YP_001922131.1| kinase, pfkB family [Clostridium botulinum E3 str. Alaska E43]
gi|188499496|gb|ACD52632.1| kinase, pfkB family [Clostridium botulinum E3 str. Alaska E43]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ +GGV +N+A+ + KL Y+I+ G D G L E K + + + + +
Sbjct: 35 IKMTVGGVGQNIAQNLVKLDVPTYLITVYGDDYFGEFLAEECKKYDIHLDYAQCILNTSS 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + D +G++ AV ++ E +TP+++ + I I+ AS+ ++D N+S ++
Sbjct: 95 STYLYVADDHGDMVTAVNDMKITEN-ITPEFLERRISFINGASICVLDGNISKESMEW-- 151
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A C +P++ +PVS+ K R +++ I PN E A+ALSG + ID
Sbjct: 152 -LANHCTVPIFVDPVSIAKVNRFENILDKIDTFKPNALE----ASALSG---IKIID--- 200
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ K A VL +KG++ V ++LG +G+ LCS+E
Sbjct: 201 ------IESAKEAAKVLHKKGVKNVFISLGENGI-LCSRE 233
>gi|251778764|ref|ZP_04821684.1| kinase, pfkB family [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083079|gb|EES48969.1| kinase, pfkB family [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ +GGV +N+A+ + KL Y+I+ G D G L E K + + + + +
Sbjct: 35 IKMTVGGVGQNIAQNLVKLDVPTYLITVYGDDYFGEFLAEECKKYDIHLDYAQCILNTSS 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + D +G++ AV ++ E +TP+++ + I I+ AS+ ++D N+S ++
Sbjct: 95 STYLYVADDHGDMVTAVNDMKITEN-ITPEFLERRISFINGASICVLDGNISKESMEW-- 151
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A C +P++ +PVS+ K R +++ I PN E A+ALSG + ID
Sbjct: 152 -LANHCTVPIFVDPVSIAKVNRFENILDKIDTFKPNALE----ASALSG---IKIID--- 200
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ K A VL +KG++ V ++LG +G+ LCS+E
Sbjct: 201 ------IESAKEAAKVLHKKGVKNVFISLGENGI-LCSRE 233
>gi|421783024|ref|ZP_16219476.1| pseudouridine kinase [Serratia plymuthica A30]
gi|407754730|gb|EKF64861.1| pseudouridine kinase [Serratia plymuthica A30]
Length = 363
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G LLE K AG+ + +T+ +
Sbjct: 93 GGVGRNIAQNVALLGRECHLISVVGDDFYGETLLEQAKLAGVHIGSFHKLHGENTSTYIS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +EK LTP + I A VL+VD NL+ ALA +
Sbjct: 153 LLDAGGEMLVAINDMRILEK-LTPALLATSKDLIQHAGVLVVDCNLTEEALAW---LFGH 208
Query: 126 C-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
C N+P++ + VS K+ +I S + +I + PN E A LSG + P
Sbjct: 209 CGNVPIFVDTVSAFKAPKIRSWLSHIHTLKPNRLE----AEILSGMTISGP--------- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
Q +P ++G++ + L++G++GV
Sbjct: 256 ---QDAQPVAHWFHQQGVQRLALSMGAEGV 282
>gi|270261412|ref|ZP_06189685.1| hypothetical protein SOD_a06440 [Serratia odorifera 4Rx13]
gi|270044896|gb|EFA17987.1| hypothetical protein SOD_a06440 [Serratia odorifera 4Rx13]
Length = 372
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G LLE K AG+ + +T+ +
Sbjct: 102 GGVGRNIAQNVALLGRECHLISVVGDDFYGETLLEQAKLAGVHIGSFHKLHGENTSTYIS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +EK LTP + I A VL+VD NL+ ALA +
Sbjct: 162 LLDAGGEMLVAINDMRILEK-LTPALLATSKDLIQHAGVLVVDCNLTEEALAW---LFGH 217
Query: 126 C-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
C N+P++ + VS K+ +I S + +I + PN E A LSG + P
Sbjct: 218 CGNVPIFVDTVSAFKAPKIRSWLSHIHTLKPNRLE----AEILSGMTISGP--------- 264
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
Q +P ++G++ + L++G++GV
Sbjct: 265 ---QDAQPVAHWFHQQGVQRLALSMGAEGV 291
>gi|94984466|ref|YP_603830.1| PfkB protein [Deinococcus geothermalis DSM 11300]
gi|94554747|gb|ABF44661.1| RbsK family ribokinase, containing DNA-binding HTH domain
[Deinococcus geothermalis DSM 11300]
Length = 377
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE +++LG + ++I+ALG D G++LL ++AG+ + R D T +
Sbjct: 97 GGVARNIAENLARLGIQTHLITALGRDAPGDLLLRETEAAGVDMRSVLRL-DAPTGTYTA 155
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GEL AVA++E + LTP + + + AS ++ D NLS L + E
Sbjct: 156 VLDNSGELLIAVAAME-VTAALTPAALNERRGLLQHASWVVADGNLSAETLTHLLTLCRE 214
Query: 126 CNIPVWFEPVSVTKSRRITSVVK---YITVVSPNEDELVAM 163
+PV FEPVSV K+ + + V+PN EL A+
Sbjct: 215 AGVPVTFEPVSVPKAAHLLPALHSGLAPHTVTPNVAELAAL 255
>gi|87121751|ref|ZP_01077638.1| hypothetical protein MED121_19424 [Marinomonas sp. MED121]
gi|86163002|gb|EAQ64280.1| hypothetical protein MED121_19424 [Marinomonas sp. MED121]
Length = 358
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 28/225 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +S+LG +ISA+G D +G+ LLE +S+G++ + + R D T+
Sbjct: 93 GGVGRNIAENLSRLGQDVSLISAIGQDKSGDWLLEQCRSSGINMDAVIRHPDFGTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHIS---SASVLMVDANLSPPALAASCKI 122
+ D +G+L AAV+ + I T D Q H S SA L+++ANLS + ++
Sbjct: 153 LNDPHGQLVAAVSDMAIIN---TLDGT-QLSHKKSLLLSAQTLLIEANLSEACIEWLAQL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
C ++ + VSV KS R+ ++ +T + N DE A AL+G + D
Sbjct: 209 --NCQGSLYADAVSVQKSVRLKPILHRLTGLKVNRDE----AKALTG--LADASD----- 255
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227
K I LL+ G++ V+L+LG++GV+ + + +S I
Sbjct: 256 --------KELIQALLKAGVKNVLLSLGNEGVIFANHKEQASHGI 292
>gi|333926781|ref|YP_004500360.1| PfkB domain-containing protein [Serratia sp. AS12]
gi|333931735|ref|YP_004505313.1| PfkB domain-containing protein [Serratia plymuthica AS9]
gi|386328604|ref|YP_006024774.1| PfkB domain-containing protein [Serratia sp. AS13]
gi|333473342|gb|AEF45052.1| PfkB domain protein [Serratia plymuthica AS9]
gi|333490841|gb|AEF50003.1| PfkB domain protein [Serratia sp. AS12]
gi|333960937|gb|AEG27710.1| PfkB domain protein [Serratia sp. AS13]
Length = 363
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G LLE K AG+ + + +T+ +
Sbjct: 93 GGVGRNIAQNVALLGRECHLISVVGDDFYGETLLEQAKLAGVHIDSFHKLHGENTSTYVS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +EK LTP + I A VL+VD NL+ ALA +
Sbjct: 153 LLDAGGEMLVAINDMRILEK-LTPALLATSKDLIQHAGVLVVDCNLTEEALAW---LFGH 208
Query: 126 C-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
C ++P++ + VS K+ +I S + +I + PN E A LSG + P
Sbjct: 209 CGSVPIFVDTVSAFKAPKIRSWLSHIHTLKPNRLE----AEILSGMTIGGP--------- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
Q +P ++G++ + L++G++GV
Sbjct: 256 ---QDAQPVAQWFHQQGVQRLALSMGAEGV 282
>gi|328868319|gb|EGG16697.1| hypothetical protein DFA_07675 [Dictyostelium fasciculatum]
Length = 1540
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y +GGV RNVAE M +LG +S +G D ++L+ H ++ ST+ + +Q +I T
Sbjct: 1169 IAYRMGGVGRNVAETMIRLGLSTLFVSLVGDDHQSSMLVNHLQALNASTKAVVQQSNIPT 1228
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + I++ G+L A+A + ++ +TP +I +F I ++ +++ D N+ + +
Sbjct: 1229 ATYNAIMN-KGDLVVAIAVMNIFDR-ITPSYIDKFKSDIVASEMIVFDGNIPIDTMISLV 1286
Query: 121 KIAAECNIPVWFEPVSVTKSRRITS------VVKYITVVSPNEDELVAMANAL 167
IA + ++ +FEP SV KS ++ + ++ IT SPN DEL M++ +
Sbjct: 1287 DIANQHSMATFFEPTSVYKSTKLINTPIDMDLLPSITFTSPNLDELERMSSEI 1339
>gi|320161657|ref|YP_004174882.1| putative carbohydrate kinase [Anaerolinea thermophila UNI-1]
gi|319995511|dbj|BAJ64282.1| putative carbohydrate kinase [Anaerolinea thermophila UNI-1]
Length = 318
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGVARNVAE +++LG + +A+G D G+ LLEH S G+ K DT
Sbjct: 42 IRFSFGGVARNVAENLARLGQAVRLATAVGEDPFGSDLLEHTASCGVDVSPSLHVKGYDT 101
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + +G L A+ ++ ++ LTP +IR+ + +SV+ VDANL P L
Sbjct: 102 GSYLAVYESDGTLKMALEDMQVLQA-LTPAYIRELEPLFAESSVIFVDANLPPKTLKVVV 160
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A +PV + SV + R+ +K++ ++S N E + N P +
Sbjct: 161 QQARRLKVPVCADTTSVVLAERLLPYLKHLFLLSTNSKEASVLTN-------HTPDVTGR 213
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
SA + + L+ +G+ +V++ L + GV+ + E
Sbjct: 214 ASALEVSR-------FLINQGVEVVIIALAAFGVVYATSE 246
>gi|81427867|ref|YP_394866.1| carbohydrate kinase [Lactobacillus sakei subsp. sakei 23K]
gi|78609508|emb|CAI54554.1| Putative carbohydrate kinase [Lactobacillus sakei subsp. sakei 23K]
Length = 312
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 118/220 (53%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN +GGV +N+A ++ LG Y+++ G D G IL ++ ++ + K ++
Sbjct: 34 VNLSVGGVGQNIAHNLANLGVPTYLMTVYGDDQYGAILHRECETNKINLDYAAEIKGANS 93
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + D +G++ AA+ + SI +TPD++++ + I+ A++ +VDAN+ ++
Sbjct: 94 STYLYVTDGSGDMLAAINDM-SIVNNITPDFLKERLAVINQATLCIVDANIPQESIEW-- 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A +P++ +PVSV K+RR +V+ I PNE E A L+G K
Sbjct: 151 -LADHLKVPMYVDPVSVAKARRFENVLNKIDTFKPNEME----AELLTGI---------K 196
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
S ES + K A L+ +GIR V ++LG+ G+ LC+ E
Sbjct: 197 ISDES---SAKMAAEYLVNQGIRHVFISLGAHGI-LCADE 232
>gi|300722134|ref|YP_003711417.1| sugar kinase [Xenorhabdus nematophila ATCC 19061]
gi|297628634|emb|CBJ89212.1| putative sugar kinase with ribokinase-like domain [Xenorhabdus
nematophila ATCC 19061]
Length = 355
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 64/301 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ L +K ++IS +G D GN L E K G++ + + + T++ +
Sbjct: 93 GGVGRNIAQNIALLKNKSHLISVIGDDTYGNTLFEKTKLTGVNVNYLYKIEGETTSICNY 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I++ NG+ AV + +EK LTP+ + Q I ASVL+VD NL+ AL + A
Sbjct: 153 IINENGQCIVAVNDMCILEK-LTPNLLSQSKSLIQHASVLVVDCNLTEEALKWLFQHAR- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIP++ + VS +K+ RI + +I + PN E A LSG I K +A+
Sbjct: 211 -NIPIFVDTVSSSKAPRIRHWLSHIHTLKPNRTE----AETLSG----VKIKTQKDAAD- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
A L G++ ++L++ ++GV + +S G+S
Sbjct: 261 -------AALWFHRHGVQRLILSMDAEGVYYSELDSIS------------GYS------- 294
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
PA+ +V+ GAGD ++ G + G ++ +S
Sbjct: 295 --------------------------PAIHTNVINANGAGDVMMAGLVHCWLEGRELQES 328
Query: 306 V 306
V
Sbjct: 329 V 329
>gi|410088124|ref|ZP_11284821.1| Pseudouridine kinase [Morganella morganii SC01]
gi|421493968|ref|ZP_15941321.1| hypothetical protein MU9_2491 [Morganella morganii subsp. morganii
KT]
gi|455740307|ref|YP_007506573.1| Pseudouridine kinase [Morganella morganii subsp. morganii KT]
gi|400191739|gb|EJO24882.1| hypothetical protein MU9_2491 [Morganella morganii subsp. morganii
KT]
gi|409765429|gb|EKN49541.1| Pseudouridine kinase [Morganella morganii SC01]
gi|455421870|gb|AGG32200.1| Pseudouridine kinase [Morganella morganii subsp. morganii KT]
Length = 363
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 132/304 (43%), Gaps = 70/304 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + + IS +G D GN L E K AG++ + R T+ +
Sbjct: 93 GGVGRNIAQNIALLGCESHFISVIGDDFYGNTLYEQAKLAGVNVSNLHRLHGETTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
+LD GE+ A+ + +EK LTP + R I H A VL+ D NLS AL
Sbjct: 153 LLDPQGEMITAINDMRILEK-LTPALLATSRDLIRH---AGVLVADCNLSEGALEWLFTN 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A N+PV+ + VS K+ +I + +I + PN E A L+G + NK
Sbjct: 209 AG--NVPVFVDTVSAFKANKIKPWLSHIHTLKPNRFE----AEILTGIKV-----ENK-- 255
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
Q + A L E+G++ + L++G +GV
Sbjct: 256 -----QDVVRAANALHEQGVQRIALSMGGEGVY--------------------------- 283
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
YS A G S+ F+VH +V +TGAGD ++ G G +
Sbjct: 284 -----------YSEAGGENGWSKPFSVH-------IVNVTGAGDAMMAGLARCWLEGEPL 325
Query: 303 MQSV 306
QS+
Sbjct: 326 SQSI 329
>gi|168183018|ref|ZP_02617682.1| kinase, PfkB family [Clostridium botulinum Bf]
gi|237794454|ref|YP_002862006.1| PfkB family kinase [Clostridium botulinum Ba4 str. 657]
gi|182673757|gb|EDT85718.1| kinase, PfkB family [Clostridium botulinum Bf]
gi|229261597|gb|ACQ52630.1| kinase, PfkB family [Clostridium botulinum Ba4 str. 657]
Length = 365
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE-GIRRQKDIDTAVV 63
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E I ++DI + +
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGKDIYGNKILEEAKTIGMDMEHSIIMREDITSTYL 152
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
S ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 S-ILDETGDMMVAIAHMDIFDK-MPLDFIKSKKIVIENSGVCIIDTNI--PQEIIEYIVN 208
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 209 NHQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE---- 256
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ----EDLERSAEFFLEKGVKRVFITLGEEGV 283
>gi|170758810|ref|YP_001786551.1| PfkB family kinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405799|gb|ACA54210.1| kinase, PfkB family [Clostridium botulinum A3 str. Loch Maree]
Length = 365
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMREDTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I S+ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKIVIESSGVCIIDTNI--PQEIIEYIVNN 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ---EDLERSAEFFLEKGVKRVFITLGEEGV 283
>gi|187780221|ref|ZP_02996694.1| hypothetical protein CLOSPO_03817 [Clostridium sporogenes ATCC
15579]
gi|187773846|gb|EDU37648.1| HTH domain protein [Clostridium sporogenes ATCC 15579]
Length = 365
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKTVIDNSGVCIIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK+++I +++ + N E A LSG + + D K SAE
Sbjct: 210 HQNVKFFLDTVSTTKAKKIKNIIGKFHTIKLNRIE----AEILSGIPIKKEDDLEK-SAE 264
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
LEKG++ V +TLG +GV
Sbjct: 265 -----------FFLEKGVKRVFITLGEEGV 283
>gi|170756384|ref|YP_001780791.1| PfkB family kinase [Clostridium botulinum B1 str. Okra]
gi|169121596|gb|ACA45432.1| kinase, PfkB family [Clostridium botulinum B1 str. Okra]
Length = 365
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKTVIENSGVCIIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ---EDLEKSAEFFLEKGVKRVFITLGEEGV 283
>gi|37528180|ref|NP_931525.1| hypothetical protein plu4352 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787617|emb|CAE16724.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 361
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G+ LL+ + AG++ + + T+ +
Sbjct: 93 GGVGRNIAQNIALLGKECHLISVVGDDFYGSTLLDQARCAGVNVDYCYKLYGESTSTYIS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +EK LTP + I A VL++D NLS AL A
Sbjct: 153 LLDDGGEMLVAINDMHILEK-LTPSLLANHCDLIQHAGVLVIDCNLSEEALVWLLTNAG- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV+ + VS K+ +I + + YI + PN E A ALSG + +P D
Sbjct: 211 -TVPVFVDTVSAFKAPKIKNWLSYIHTLKPNCLE----AEALSGMKITQPTDV------- 258
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGV 214
PA+ ++G++ +VL++G +GV
Sbjct: 259 ------PAVARWFHDQGVQRLVLSMGVEGV 282
>gi|226357021|ref|YP_002786761.1| PfkB family protein carbohydrate kinase [Deinococcus deserti
VCD115]
gi|226319011|gb|ACO47007.1| putative carbohydrate kinase, PfkB family protein [Deinococcus
deserti VCD115]
Length = 372
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 19/218 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L ++SA+G D+ G+ LL ++AG+ G+ R D T +
Sbjct: 98 GGVARNVAENLGRLRVPVSLVSAVGRDVLGDALLRETEAAGVEVRGVLRVPDEPTGTYTA 157
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GEL AVA++ +++ L+P +R+ + AS ++ D NL L +++AE
Sbjct: 158 VLDETGELVVAVAAMGVMDR-LSPAALRERRGLLRGASWIVADGNLRQDTLLLLLELSAE 216
Query: 126 CNIPVWFEPVSVTKSRRITSVVK---YITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ V FEPVSV K+ ++ +K +++PN EL A+ ++R
Sbjct: 217 AGVQVAFEPVSVPKAAQLRPALKARRAPALITPNVAELAAL------------LERTVPD 264
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+T A L L ++G+ L+ + G+ G L+ + +
Sbjct: 265 TPGDLRT---AALELHDQGVDLIWIRRGALGSLVSTPD 299
>gi|333371707|ref|ZP_08463651.1| PfkB family carbohydrate kinase [Desmospora sp. 8437]
gi|332975803|gb|EGK12684.1| PfkB family carbohydrate kinase [Desmospora sp. 8437]
Length = 373
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARN+AE +++ G + +++A+G D G +L+H +++G+ R +T +
Sbjct: 101 FGGVARNIAENLARAGVEVSLLTAVGEDRDGEAILDHCRNSGVDVSLSTRWSGDETGSYT 160
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L+ GE+A A+A +E +++ + P + + I S ++ D NL P L +
Sbjct: 161 AVLEPGGEMALALADMEVLDR-IDPSLLERLWPRIRSVETVIADTNLPPETLEELIRRCR 219
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E + + PVSV K+ R+ + +TV N DE A+ + G+ + +D +
Sbjct: 220 EDGVDLAIVPVSVPKADRLPKDLTGVTVWVGNADE----ASEIVGDGIREEVDGIE---- 271
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A +L ++G+R VVLT G GVL +E
Sbjct: 272 --------ACRMLRQRGVRHVVLTRGEAGVLYADEE 299
>gi|153938609|ref|YP_001390516.1| PfkB family kinase [Clostridium botulinum F str. Langeland]
gi|168178586|ref|ZP_02613250.1| kinase, PfkB family [Clostridium botulinum NCTC 2916]
gi|384461580|ref|YP_005674175.1| kinase, PfkB family [Clostridium botulinum F str. 230613]
gi|387817446|ref|YP_005677791.1| pseudouridine kinase [Clostridium botulinum H04402 065]
gi|152934505|gb|ABS40003.1| kinase, PfkB family [Clostridium botulinum F str. Langeland]
gi|182670371|gb|EDT82345.1| kinase, PfkB family [Clostridium botulinum NCTC 2916]
gi|295318597|gb|ADF98974.1| kinase, PfkB family [Clostridium botulinum F str. 230613]
gi|322805488|emb|CBZ03052.1| pseudouridine kinase [Clostridium botulinum H04402 065]
Length = 365
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKTVIENSGVCIIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ---EDLERSAEFFLEKGVKRVFITLGEEGV 283
>gi|365133508|ref|ZP_09342796.1| hypothetical protein HMPREF1032_00592 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363615500|gb|EHL66962.1| hypothetical protein HMPREF1032_00592 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 309
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 23/230 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+ + + +LG + SA+G D G++L +AG+ T + +T+ +
Sbjct: 38 GGVCRNICDNLCRLGLTVELCSAVGGDAYGDMLRGACTAAGIGTRHLAVFPAQNTSAYIS 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D G++ A++ + +++ LTP ++ + ++ A V + DANLS AL +A
Sbjct: 98 IMDSEGDMLVAMSDMHILKEALTPSYVEGLLPVLNGADVCVADANLSAGALE---TLATR 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
C +P+ +PVS +R + Y + PN E+ LSG +
Sbjct: 155 CTVPLMLDPVSTAWARNAAPLAGYFHTLKPNLMEM----EVLSGMRITNE---------- 200
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235
+ L A +LLEKG+ V ++LG +G+ ++ ++R +K++P+
Sbjct: 201 --RELDAACGMLLEKGVYQVFVSLGREGLYF-RRQGCGALR---KKSRPF 244
>gi|339007374|ref|ZP_08639949.1| hypothetical protein BRLA_c11370 [Brevibacillus laterosporus LMG
15441]
gi|421872367|ref|ZP_16303985.1| pfkB carbohydrate kinase family protein [Brevibacillus laterosporus
GI-9]
gi|338776583|gb|EGP36111.1| hypothetical protein BRLA_c11370 [Brevibacillus laterosporus LMG
15441]
gi|372458340|emb|CCF13534.1| pfkB carbohydrate kinase family protein [Brevibacillus laterosporus
GI-9]
Length = 364
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 63/300 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG +I+++G D G +L K G+ T +
Sbjct: 92 GGVARNIAENLGRLGCVTSLITSVGNDKEGEWVLAETKQHGVDVSQSWMLSSEQTGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LDV+GE+ ++A+++ EK +T + I + HI ++ ++++D NL LA K +
Sbjct: 152 LLDVDGEMFVSLANMDIYEK-VTTEMIAEKWAHIVASDIVLLDTNLPEDVLAYMIKRCHD 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI ++ +PVS K++++ + +T + PN++E A LSG + D
Sbjct: 211 ENITLYIDPVSSAKAKKLPESLMGVTSILPNQEE----AEILSGMKINNVED-------- 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+K A + ++G V++T+G G+ + S E
Sbjct: 259 ----VKTACQFIRKRGALNVIVTMGEQGIFVSSPE------------------------- 289
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
V P P VV +TGAGD G L + G +++ +
Sbjct: 290 ---------------------HEVLLPPYPVDVVDVTGAGDAFASGLLHGVLHGEELLDA 328
>gi|397904244|ref|ZP_10505164.1| Pseudouridine kinase [Caloramator australicus RC3]
gi|343178991|emb|CCC58063.1| Pseudouridine kinase [Caloramator australicus RC3]
Length = 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 20/222 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE ++++G K +++ LG D+ G + +H K G+ + ++ T+
Sbjct: 93 FGGVGRNIAENLARMGVKTKLLTLLGEDIYGRKIYDHAKKIGMDVSSVYFIEEKQTSTYI 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+I D G++A A++ ++ ++F D+I++ I ++ ++VD NL L I+
Sbjct: 153 SIQDEKGDMALALSCMDIYDEF-KVDYIKENKGLIKNSKCIVVDTNLPEDVLKY---ISE 208
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E +P++ + VS TK+ ++ + + PN+ E A AL+G I N
Sbjct: 209 EFEVPIFLDTVSTTKALKVKDFIGNFYCIKPNKYE----AEALTG------IKINDE--- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
+ LK L++G++ + ++LG DGV + + ++
Sbjct: 256 ---KDLKICSDYFLQRGVKRIFISLGEDGVFYSDGRIYNLLK 294
>gi|302340415|ref|YP_003805621.1| PfkB domain-containing protein [Spirochaeta smaragdinae DSM 11293]
gi|301637600|gb|ADK83027.1| PfkB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 313
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+ GGV RN+AE +++LG++ + A+G D G +LE + +G+ T + R +
Sbjct: 33 VSNAAGGVGRNIAENLARLGTRVRLCGAVGEDTQGRFILESCEKSGIDTSLVIRSARQPS 92
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ILD GEL AVA + + E LT + + I A++L++DANL P +
Sbjct: 93 GCYLSILDEKGELVMAVADMSATES-LTCEVSASWFRSIEEAALLIIDANLPTPLIKELV 151
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163
A +PV +PVSV+K+ R++ + I + PN DE A+
Sbjct: 152 TRAEAAGVPVAADPVSVSKAIRLSPYLSKIRWLFPNRDEWQAL 194
>gi|424826667|ref|ZP_18251523.1| PfkB family kinase [Clostridium sporogenes PA 3679]
gi|365980697|gb|EHN16721.1| PfkB family kinase [Clostridium sporogenes PA 3679]
Length = 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMIVAIAHMDIFDK-MPLDFIKGKKTVIENSGVCVIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HENVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ---EDLEKSAEFFLEKGVKRVFITLGEEGV 283
>gi|148379154|ref|YP_001253695.1| kinase, PfkB family [Clostridium botulinum A str. ATCC 3502]
gi|153932194|ref|YP_001383529.1| PfkB family kinase [Clostridium botulinum A str. ATCC 19397]
gi|153934943|ref|YP_001387078.1| PfkB family kinase [Clostridium botulinum A str. Hall]
gi|148288638|emb|CAL82719.1| putative sugar kinase [Clostridium botulinum A str. ATCC 3502]
gi|152928238|gb|ABS33738.1| kinase, PfkB family [Clostridium botulinum A str. ATCC 19397]
gi|152930857|gb|ABS36356.1| kinase, PfkB family [Clostridium botulinum A str. Hall]
Length = 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMREDTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKIVIENSGVCIIDTNI--PQEIIEYIVNN 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V +TLG +GV
Sbjct: 257 ---EDLERSAEFFLEKGVKRVFITLGEEGV 283
>gi|88798617|ref|ZP_01114201.1| Sugar kinase, ribokinase family protein [Reinekea blandensis
MED297]
gi|88778717|gb|EAR09908.1| Sugar kinase, ribokinase family protein [Reinekea sp. MED297]
Length = 372
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG++ M++ +G D G L+E + AG+ T+ + R + T+
Sbjct: 93 GGVGRNIAENLARLGNEVVMVTLVGDDSRGRYLIEQAQEAGIQTQAMVRHSEHATSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ + GEL A+A + IE+ LTP+W+ + + + SA L+V+ANL P +
Sbjct: 153 LNNDQGELVGAIADMAIIEQ-LTPEWLAERMSLLQSAQTLLVEANL--PEATLTWLGEQS 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N P+ + VS TK+ R+ ++ + ++ N E + + + + ++ S E
Sbjct: 210 LNAPLVADAVSATKAVRLKPLLHRLDLLKVNRSEALTLIDEPASSDL---------SDEQ 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
L IL LL G+ V+L+LG GV
Sbjct: 261 L-------ILRLLACGVTSVLLSLGERGV 282
>gi|410456063|ref|ZP_11309932.1| hypothetical protein BABA_19501 [Bacillus bataviensis LMG 21833]
gi|409928545|gb|EKN65651.1| hypothetical protein BABA_19501 [Bacillus bataviensis LMG 21833]
Length = 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE +S+LG +++ +G D GN +L+ KS G+ + T +
Sbjct: 92 GGVARNLAESLSRLGLTTSLMACVGDDKEGNWILKETKSQGVDVSQVWVLPTEQTGTFTT 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD+NGE ++A + EK LT + HIS+++ + +D N+ +++ K ++
Sbjct: 152 LLDINGESVVSMADMNIYEK-LTTSMFEEKWSHISASTAVFLDTNIPEESISYVMKRCSD 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIP++ +PVS K+R++ + + ++ N E + + ID K+
Sbjct: 211 VNIPIYIDPVSPVKARKLPFRLDGVELLILNRGEAEILTDI--------KIDSIKN---- 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ A + ++G++ V++TLG GV S E
Sbjct: 259 ----CQTACEKMSQRGVQKVLITLGDQGVYYYSPE 289
>gi|397616643|gb|EJK64067.1| hypothetical protein THAOC_15234 [Thalassiosira oceanica]
Length = 706
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 16/218 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEG-IRRQKDIDTAVVS 64
GGVARN+AE + +LGS+P +A+G D G L+ G+ TE + R TA +
Sbjct: 425 GGVARNIAEVLGRLGSRPTFYTAVGHDHDG--LISRLNHCGVITENSVFRSSKYSTARYA 482
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD G+L AAV+ ++ ++ P + L++DAN +L + K
Sbjct: 483 ALLDHRGDLVAAVSDMDCLQCIPVPPSAEDLV----GVEYLVLDANAPADSLVRAAKNGV 538
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVS---PNEDELVAMANALSGENMFRPIDRN-- 179
E V F+P SV K+ +T +++ +S PN DEL AMA AL ++ P
Sbjct: 539 EAGAKVCFDPTSVPKASLLTKSSDFLSCLSYMFPNTDELYAMARAL--DDWVEPCGSETS 596
Query: 180 --KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
++++ L ++ +++ +G R ++L SD ++
Sbjct: 597 LVEYASSCLLGNMREKACLVITRGHRGLLLATKSDDII 634
>gi|375261941|ref|YP_005021111.1| pseudouridine kinase [Klebsiella oxytoca KCTC 1686]
gi|365911419|gb|AEX06872.1| pseudouridine kinase [Klebsiella oxytoca KCTC 1686]
Length = 317
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL+ +G+ + + + T
Sbjct: 41 IKYTPGGVGRNIAQNIALLNKTAWLLSVVGDDFYGHSLLKQTAQSGVHVDKCQVIQGEGT 100
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I +A+V++VD N+S ALA
Sbjct: 101 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHHDFIRNAAVIVVDCNISEAALAW-- 157
Query: 121 KIAAECN-IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDR 178
+ C PV+ +PVS K +I+ ++ I + PN E ++ ALSG + +
Sbjct: 158 -LMENCGATPVFVDPVSAWKCVKISQHLERIHTLKPNRIEAETLSGIALSGTDDVARVAD 216
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
H ++G++ +VL++G DGV KE
Sbjct: 217 WFH-----------------QRGLKRLVLSMGGDGVYYSEKE 241
>gi|365838505|ref|ZP_09379843.1| putative ATP synthase F1, epsilon subunit [Hafnia alvei ATCC 51873]
gi|364559298|gb|EHM37281.1| putative ATP synthase F1, epsilon subunit [Hafnia alvei ATCC 51873]
Length = 372
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G+ LLE K AG+ + + +T+ +
Sbjct: 102 GGVGRNIAQNIALLGRECHLISVVGDDFYGDTLLEQAKIAGVHIDSFHKLHGENTSTYVS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A+ + +EK LTP + I A VL+VD NL+ ALA A
Sbjct: 162 LLDESGEMLVAINDMRILEK-LTPALLATSKDLIQHAGVLVVDCNLTEDALAWLFSHAG- 219
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
++P++ + VS K+ +I + + +I + PN E A LSG + P D
Sbjct: 220 -SVPIFVDTVSAFKAPKIRNWLSHIHTLKPNRLE----AEILSGMTITGPQD-------- 266
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGV 214
PA+ E+G++ + L++G GV
Sbjct: 267 -----APAVATWFHEQGVQRIALSMGPAGV 291
>gi|226948435|ref|YP_002803526.1| PfkB family kinase [Clostridium botulinum A2 str. Kyoto]
gi|226842360|gb|ACO85026.1| kinase, PfkB family [Clostridium botulinum A2 str. Kyoto]
Length = 365
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKTVIENSGVCIIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ + + VS TK++++ +++ + N E A LSG PI +
Sbjct: 210 HQNVKFFLDTVSTTKAKKVKNIIGKFHTIKLNRIE----AEILSG----IPIKKE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ L+ + LEKG++ V TLG +GV
Sbjct: 257 ---EDLERSAEFFLEKGVKRVFTTLGEEGV 283
>gi|433545048|ref|ZP_20501411.1| hypothetical protein D478_15160 [Brevibacillus agri BAB-2500]
gi|432183657|gb|ELK41195.1| hypothetical protein D478_15160 [Brevibacillus agri BAB-2500]
Length = 366
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 63/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG + +++G D G +L+ K G+ + R T +
Sbjct: 92 GGVARNIAENLGRLGCNTSLFTSVGEDKEGEWILQETKKHGVDISQVWRLPMQRTGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD++GE+ ++A+++ I LTP+ + H+++A + +D N+ LA E
Sbjct: 152 LLDIDGEMVVSLANMD-IYDALTPEMFAEKWSHLAAAHAIFIDTNIPGDCLAYIIGRCRE 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI ++ +PVS K++++ + + + PN +E A L+G R I
Sbjct: 211 ENIRLFVDPVSSAKAKKLPQQLDGVEAILPNREE----AELLAG-MAIRSI--------- 256
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ A + E+G++ V++T+G G+ S+++ M PY
Sbjct: 257 --EDCAEACRKIRERGVKHVIVTMGEAGIYYQSEDVSEHM-------APY---------- 297
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
P VV +TGAGD G L I +G
Sbjct: 298 -----------------------------PTEVVDVTGAGDAFASGLLYGIVNG 322
>gi|15807303|ref|NP_296033.1| carbohydrate kinase [Deinococcus radiodurans R1]
gi|6460123|gb|AAF11859.1|AE002063_2 carbohydrate kinase, PfkB family [Deinococcus radiodurans R1]
Length = 383
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE +++LG ++SA+G D G++LL ++AG+ G+ R T +
Sbjct: 109 GGVARNVAENLARLGVSAALVSAVGPDSLGDVLLRETEAAGVDVSGVLRVSGAATGSYTA 168
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L GEL AVA+++ +E LTP +R + A+ ++ D NL L +AAE
Sbjct: 169 VLGAGGELLLAVAAMDVME-HLTPAALRGLRASLRGAAWVVADGNLPADTLPTLLALAAE 227
Query: 126 CNIPVWFEPVSVTKSRRITSV-----VKYITVVSPNEDELVAM 163
+ V +EPVSV K+ R+ V Y V+PN EL A+
Sbjct: 228 TGVRVVYEPVSVPKAARLRPALAAGHVPY--AVTPNLAELAAL 268
>gi|429220167|ref|YP_007181811.1| sugar kinase [Deinococcus peraridilitoris DSM 19664]
gi|429131030|gb|AFZ68045.1| sugar kinase, ribokinase [Deinococcus peraridilitoris DSM 19664]
Length = 312
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 67/303 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE +++L +ISA+G D G +LL +AG+ + R + T +
Sbjct: 40 GGVARNVAENLARLRVPVRLISAVGNDAHGEMLLSEAHAAGVDVTSVLRVNE-PTGTYTA 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L GEL AVA+++ + L ++ + +++++VD NLS AL+ A E
Sbjct: 99 VLAPEGELVIAVAAMD-VTAQLNVSALQARRSLLEDSALVIVDGNLSSEALSFVGCTAHE 157
Query: 126 CNIPVWFEPVSVTKSRRITSVVK---YITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+P+ EPVSV K+ ++ +++ + ++PN EL AM + RP+
Sbjct: 158 AGVPLIIEPVSVPKAAKVRALLHLGLQVHTLTPNCQELEAM--------LARPL------ 203
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
S + L A L G++ V + LG+DG L C
Sbjct: 204 --STHEDLLRAARELHGWGVQRVWVRLGADGSLFC------------------------- 236
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
++R++ + PALPA V +TGAGD ++ G A++ G
Sbjct: 237 --------TARHAEVL-------------PALPARVTDVTGAGDAMLAGYAAALLEGQSD 275
Query: 303 MQS 305
+QS
Sbjct: 276 LQS 278
>gi|317494289|ref|ZP_07952704.1| pfkB family carbohydrate kinase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917744|gb|EFV39088.1| pfkB family carbohydrate kinase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 372
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G+ LLE K AG+ + + T+ +
Sbjct: 102 GGVGRNIAQNIALLGRECHLISVVGDDFYGDTLLEQAKLAGVHIDSFHKLHGESTSTYVS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A+ + +EK LTP + I A VL+VD NL+ ALA A
Sbjct: 162 LLDESGEMLVAINDMRILEK-LTPALLATSKDLIQHAGVLVVDCNLTEDALAWLFSHAG- 219
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
++P++ + VS K+ +I + + +I + PN E A LSG + P D
Sbjct: 220 -SVPIFVDTVSAFKAPKIRNWLSHIHTLKPNRLE----AEILSGMTITGPQD-------- 266
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGV 214
PA+ E+G++ + L++G GV
Sbjct: 267 -----APAVATWFHEQGVQRIALSMGPAGV 291
>gi|402844092|ref|ZP_10892471.1| carbohydrate kinase, PfkB family [Klebsiella sp. OBRC7]
gi|402275900|gb|EJU25036.1| carbohydrate kinase, PfkB family [Klebsiella sp. OBRC7]
Length = 343
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 21/221 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L K +++S +G D G+ LL+ +G+ + + + T
Sbjct: 67 IKYTPGGVGRNIAQNIALLNKKAWLLSVVGDDFYGHSLLKQTAHSGVHVDKCQVIQGEGT 126
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I +A+V++VD N+S ALA
Sbjct: 127 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHQDFICNAAVIVVDCNISEAALAWLM 185
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + PV+ +PVS K +I+ + I + PN E ++ ALSG + +
Sbjct: 186 ENSGA--TPVFVDPVSAWKCVKISQHLGRIHTLKPNRLEAETLSGIALSGTDDVARVADW 243
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
H ++G++ +VL++G DGV K+
Sbjct: 244 FH-----------------QRGLKRLVLSMGGDGVYYSEKD 267
>gi|326793800|ref|YP_004311620.1| PfkB domain-containing protein [Marinomonas mediterranea MMB-1]
gi|326544564|gb|ADZ89784.1| PfkB domain protein [Marinomonas mediterranea MMB-1]
Length = 358
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 117/215 (54%), Gaps = 24/215 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG ++++ +G D G + E + AG++T+ + R + + T+
Sbjct: 93 GGVGRNIAENLARLGENVHLVALIGEDQNGEWINERTRDAGVNTQDLIRHEQLPTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + GEL AA+A + +++ L+P+ ++ + + SA +++DANLS + + +
Sbjct: 153 INNEVGELNAAIADMRIVDQ-LSPERLQTKMPLLQSAGHIILDANLSEDTIRWLATLTLK 211
Query: 126 CNIPVW-FEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
W + VS TK+ R+ ++ ++V+ N+DE A+ +D ++
Sbjct: 212 T---TWCADAVSATKAIRLRPILSKLSVLKVNQDEARAI------------LDSDEQDQT 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L + +LLE+G++ V+L+LG+ GVL S+
Sbjct: 257 KLAK-------LLLEQGVQQVLLSLGNQGVLYASE 284
>gi|397659051|ref|YP_006499753.1| Pseudouridine kinase [Klebsiella oxytoca E718]
gi|394347277|gb|AFN33398.1| Pseudouridine kinase [Klebsiella oxytoca E718]
Length = 343
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL+ +G+ + + + T
Sbjct: 67 IKYTPGGVGRNIAQNIALLNKTAWLLSVVGDDFYGHSLLKQTAQSGVHVDKCQVIQGEGT 126
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I +A+V++VD N+S ALA
Sbjct: 127 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHHDFIRNAAVIVVDCNISEAALAW-- 183
Query: 121 KIAAECN-IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDR 178
+ C PV+ +PVS K +I + I + PN E ++ ALSG + +
Sbjct: 184 -LMENCGATPVFVDPVSAWKCVKIRQHLGRIHTLKPNRIEAETLSGIALSGTDDVASVAD 242
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
H ++G++ +VL++G DGV KE
Sbjct: 243 WFH-----------------QRGLKRLVLSMGGDGVYYSEKE 267
>gi|374341008|ref|YP_005097744.1| sugar kinase [Marinitoga piezophila KA3]
gi|372102542|gb|AEX86446.1| sugar kinase, ribokinase [Marinitoga piezophila KA3]
Length = 362
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +S+L +++A+G D+ G ++EH K+ G+ D T+
Sbjct: 93 GGVGRNIAENLSRLNINTKLLTAIGNDIYGKKIIEHSKNIGIDISDSLILSDFSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
ILD G++A ++ +E EK + ++I+ + I + +++D NL + I
Sbjct: 153 ILDEKGDMAVGLSDMEICEK-IDINYIKSKKNIIEKSKAVILDTNLPQKTIEY---ITKN 208
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N + VS K+ +I +++ Y+ + PN + A LSG + NK AE
Sbjct: 209 INNTFIVDTVSTAKTVKILNILNYVHSIKPN----IYEAEILSGIKI-----ENKKDAE- 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A+ ++ KG++ V LT+G DG+L K
Sbjct: 259 ------KAVRNIINKGVKRVFLTMGKDGILCADK 286
>gi|399050922|ref|ZP_10740912.1| sugar kinase, ribokinase [Brevibacillus sp. CF112]
gi|398051297|gb|EJL43625.1| sugar kinase, ribokinase [Brevibacillus sp. CF112]
Length = 366
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 63/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG + +++G D G +L+ K G+ + R T +
Sbjct: 92 GGVARNIAENLGRLGCNTSLFTSVGEDKEGEWILQETKKHGVDISQVWRLPMQRTGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD++GE+ ++A+++ I LTP+ + H+++A + +D N+ LA E
Sbjct: 152 LLDIDGEMVVSLANMD-IYDALTPEMFAEKWSHLAAAHAIFIDTNIPGNCLAYIIGRCRE 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI ++ +PVS K++++ + + + PN +E A L+G R I
Sbjct: 211 ENIRLFVDPVSSAKAKKLPQQLDGVEAILPNREE----AELLAG-MAIRSI--------- 256
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ A + E+G++ V++T+G G+ ++++ M PY
Sbjct: 257 --EDCAEACRKIRERGVKHVIVTMGEAGIYYQAEDVSEHM-------APY---------- 297
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
P VV +TGAGD G L I +G
Sbjct: 298 -----------------------------PTEVVDVTGAGDAFASGLLYGIVNG 322
>gi|253991383|ref|YP_003042739.1| putative kinase [Photorhabdus asymbiotica]
gi|253782833|emb|CAQ85998.1| putative kinase [Photorhabdus asymbiotica]
Length = 363
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 21/216 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG + ++IS +G D G+ LL+ K AG++ + + +T+ +
Sbjct: 93 GGVGRNIAQNIALLGKECHLISVVGDDFYGSTLLDLAKRAGVNVDHCYKLCGENTSTYIS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ AV + +EK LTP + I A VL+VD NLS AL A
Sbjct: 153 LLDDSGEMLVAVNDMHILEK-LTPSLLVDNCDLIQHAGVLVVDCNLSEEALTWLFTNAG- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV+ +PVS K+ +I + + YI + PN E A LSG + D
Sbjct: 211 -TVPVFVDPVSAFKAPKIKNWLSYIHTLKPNRLE----AEVLSGMKITHLSDV------- 258
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGVLLCSKE 220
P + ++G++ +VL++G +G K+
Sbjct: 259 ------PGVAQWFHDQGVQQLVLSMGMEGAYFSEKD 288
>gi|350410754|ref|XP_003489128.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Bombus impatiens]
Length = 691
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 60/312 (19%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A + LG + +IS +G D G ++ KS G + + + +++TA +
Sbjct: 389 GGVGRNIANALINLGLNATRLISVVGNDQPGKAII---KSLGDGAQTVEQLSNMNTARCT 445
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D GE AV +E ++P ++++ ++ ++S +++D NL + +A
Sbjct: 446 VIIDYKGECRFAVGEMEVFSS-ISPHLVKKYQSYVENSSFIVLDGNLPLDTIRYVLDLAT 504
Query: 125 ECNIPVWFEPVSVTKSRRI----TSVVKYITVVSPNEDELVAMANAL--SGENMFRPIDR 178
IPVW+EP V K+ ++ + + +SPN +EL A+ L S + PID
Sbjct: 505 CSKIPVWYEPTDVNKATKVFKAKSQWQNVLHFISPNRNELSAIGKYLGISVPDNKLPID- 563
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238
+ +K I + + I +V+ TLGS GVL+ K L P+
Sbjct: 564 --------LEEVK-TIAEQVAEFIPVVISTLGSQGVLVVRKAL---------GNDPFYDK 605
Query: 239 RD---LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL------PASVVRLTGAGDCLV 289
R + VTSR +P L P ++G GDCL
Sbjct: 606 RGKLVAHTMVTSRL---------------------YPPLSFISDDPKETYNVSGCGDCLT 644
Query: 290 GGTLASISSGLD 301
G + I LD
Sbjct: 645 AGIIYGIHKNLD 656
>gi|296185869|ref|ZP_06854275.1| kinase, PfkB family [Clostridium carboxidivorans P7]
gi|296049537|gb|EFG88965.1| kinase, PfkB family [Clostridium carboxidivorans P7]
Length = 364
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 22/228 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E + K+ + +I+ +G D+ GN ++E ++ GL E + T+
Sbjct: 92 LGGVGRNIGENLRKMDVETKLITVIGNDVYGNKIIEEGRNIGLDMEHSLVLHEQPTSTYL 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ G++ A+A ++ +E+ +T ++I++ H I +AS+ ++D N+ P +
Sbjct: 152 CILNEKGDMQVAIAYMDILEQ-MTVEFIQKKKHVIDNASICVIDTNI--PQKTIEYIVTN 208
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + + VS TK++++ ++ + PN+ E A LSG + D NK
Sbjct: 209 HKDTEFFLDTVSTTKAKKVKDIIGCFHTIKPNKIE----AEILSGIEIKSNDDLNKCGK- 263
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL---CSKELLSSMRIGL 229
L+KG++ V +TLG DGV C + ++ + ++ +
Sbjct: 264 -----------YFLDKGVKRVFITLGEDGVYYNDGCEENIVKTPKVNV 300
>gi|340719276|ref|XP_003398081.1| PREDICTED: LOW QUALITY PROTEIN: pseudouridine-metabolizing
bifunctional protein C1861.05-like [Bombus terrestris]
Length = 690
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 50/307 (16%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A + LG + +IS +G D G ++ KS G + + + +++TA +
Sbjct: 388 GGVGRNIANALINLGLNATRLISVVGNDQPGKAII---KSLGDGAQTVEQLSNMNTARCT 444
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D GE AV +E ++P ++++ ++ ++S +++D NL + +A
Sbjct: 445 VIIDYKGECRFAVGEMEVFSS-ISPHLVKKYQSYVENSSFIVLDGNLPLDTIRYVLDLAT 503
Query: 125 ECNIPVWFEPVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IPVW+EP V K+ ++ + + +SPN +EL A+ G+ + + NK
Sbjct: 504 CSKIPVWYEPTDVNKATKVFKAKSQWQNVLHFISPNRNELSAI-----GKYLGISVPDNK 558
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S + + +K I + + I +V+ TLGS GVL+ K L S P+
Sbjct: 559 LSID--LEEVK-TIAEQVAEFIPVVISTLGSQGVLVVRKALGSD---------PF----- 601
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL------PASVVRLTGAGDCLVGGTLA 294
Y + + + +P L P ++G GDCL G +
Sbjct: 602 -------------YDKEGKLVAHTMVISRLYPPLSFISDDPKETYNVSGCGDCLTAGIIY 648
Query: 295 SISSGLD 301
I LD
Sbjct: 649 GIHKNLD 655
>gi|426201396|gb|EKV51319.1| hypothetical protein AGABI2DRAFT_189568 [Agaricus bisporus var.
bisporus H97]
Length = 697
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 142/341 (41%), Gaps = 61/341 (17%)
Query: 5 LGGVARNVAECMSKL------GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
LGGVARNVAE ++ + +++ +G D+ G +L E + G+ T+G + D
Sbjct: 324 LGGVARNVAEASHRILAAQEHATSSLLVAPVGEDVLGKLLFEETQRLGMRTDGFLK-SDK 382
Query: 59 DTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
TAV + +LD G L VA ++ + I Q HI ++ +D N SP
Sbjct: 383 RTAVCNMVLDNTGNLVGGVADMDITQAITDEQIIPQLRKHI--PKLVAIDGNFSPATTKG 440
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKY-----------ITVVSPNEDELVAMANAL 167
+ +I V+FEP SV KS I +++ I SPN ELV + N +
Sbjct: 441 IVSYCIKNDIKVFFEPTSVIKSTSILPLIQDLLANTDLKKPPIAFFSPNLPELVHVYNTI 500
Query: 168 SGE--------------------NMFR-PIDRNKHSAESLFQTLKPAILVLLEKGIRLV- 205
E + FR +++ + K + L+++GI +
Sbjct: 501 QAEPYNLSNNSYWWTCIDSMGLGSAFRMDLEQLARRNATDLDVSKGTLSFLIDQGIAQMA 560
Query: 206 --VLTLGSDGVLLCSKE-LLSSMRIGLRK--TKPYGFSRD--LYKTVTSRCHSSRYSGAM 258
+L + ++ C + + MRI T P+G R L + V + +S
Sbjct: 561 VNLLPIFQHLIIKCGERGAIVVMRINPEDAATSPWGRQRSNPLARYVVVQGNSKEI---- 616
Query: 259 EPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISS 298
HFP L ++ +TGAGD VG LASIS+
Sbjct: 617 -------IVLQHFPGLNVDNITNVTGAGDSFVGAVLASISN 650
>gi|195388368|ref|XP_002052852.1| GJ17785 [Drosophila virilis]
gi|194149309|gb|EDW65007.1| GJ17785 [Drosophila virilis]
Length = 695
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 40/297 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RNVAE + KL +ISA+G D G+IL + +A S G+ K T++ S
Sbjct: 378 GGVGRNVAEGIYKLYGDVNLISAVGGDQLGHILRQLMPAALQS--GLIVDKKCATSLCSL 435
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D +G+ + +E + + +TP+ + +A ++++D+N+S A+A+ ++A
Sbjct: 436 IFDQSGDCKLILGDME-VHRSITPEVLTARADLFRTAPLIVMDSNISEQAMASLLQLAQR 494
Query: 126 CNIPVWFEPVSV---TKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+PV+FEP + K R+ + ++I ++ PN EL + ++G+ + D
Sbjct: 495 YQVPVFFEPTDMFIAGKPFRLRPDLTQHIRLLKPNMHELKTIVETITGQPVDWQPDTKVQ 554
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+E L Q + +L +E ++ TLG GVLL +R + S+ L
Sbjct: 555 RSELLEQAKQ--LLQRIECHFNCIIATLGDHGVLL-----------SIRSDAEFDASKLL 601
Query: 242 YKTVTSRCHSSRYSGAMEPAGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
A+ P+ G ++F+A P L S+V ++GAGD G + ++
Sbjct: 602 ---------------ALSPSCGHITRFYAA--PKL-HSIVNVSGAGDSFCAGFITAL 640
>gi|83644246|ref|YP_432681.1| ribokinase family sugar kinase [Hahella chejuensis KCTC 2396]
gi|83632289|gb|ABC28256.1| Sugar kinase, ribokinase family [Hahella chejuensis KCTC 2396]
Length = 364
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE +++LG +I+ LG D+ G LLE G+ + D T+ +
Sbjct: 94 GGVARNIAENLARLGVDVRLIAPLGKDVYGQTLLEQGLQCGIDMRHCLQLDDAVTSTYLS 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +G+++ A+ ++ +E+ L+ +++R I AS+L+VDANL PA ++
Sbjct: 154 VLDESGDMSVAINDMQILER-LSVEYLRSHADMIRRASLLIVDANL--PANVLEYLLSQF 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
++P++ +PVS KS ++ ++ I PN +A A LSG + +++
Sbjct: 211 PDLPIFADPVSGPKSEKLRGLLDAIHTFKPN----LAEAKRLSGVDA-----KDEGQLPQ 261
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
L KGI+ + ++LG+ GV
Sbjct: 262 LASWFH-------RKGIKRICISLGAQGV 283
>gi|423115294|ref|ZP_17102985.1| hypothetical protein HMPREF9689_03042 [Klebsiella oxytoca 10-5245]
gi|376381380|gb|EHS94117.1| hypothetical protein HMPREF9689_03042 [Klebsiella oxytoca 10-5245]
Length = 362
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATFLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ P L +A
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVILVDCNLTEPLLEWVFTLANA 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L GE + DR++
Sbjct: 212 --IPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGEPIENEADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A+ L E+G R VV+ D V CS+
Sbjct: 261 -------ALAWLHERGTRRVVICSEDDSV-FCSE 286
>gi|409083564|gb|EKM83921.1| hypothetical protein AGABI1DRAFT_110531 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 697
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 145/345 (42%), Gaps = 61/345 (17%)
Query: 1 VNYVLGGVARNVAECMSKL------GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR 54
V+ LGGVARNVAE ++ + +++ +G D+ G +L E + G+ T+G +
Sbjct: 320 VSLSLGGVARNVAEASHRILAAQEHATSSLLVAPVGEDVLGKLLFEETQRLGMRTDGFLK 379
Query: 55 QKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
D TAV + +LD G L VA ++ + I Q HI ++ +D N SP
Sbjct: 380 -SDKRTAVCNMVLDNTGNLVGGVADMDITQAITDEQIIPQLRKHIPK--LVAIDGNFSPA 436
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITV-----------VSPNEDELVAM 163
+ +I V+FEP SV KS I +++ + V SPN ELV +
Sbjct: 437 TTKGIVSYCIKNDIKVFFEPTSVIKSTSILPLIQDLLVNTDLKKPPIAFFSPNLPELVHV 496
Query: 164 ANALSGE--------------------NMFR-PIDRNKHSAESLFQTLKPAILVLLEKGI 202
N + E + FR +++ + K + L+++GI
Sbjct: 497 YNTIQAEPYNLSNNSYWWTCIDSMGLGSAFRMDLEQLARRNATDLDVSKGTLSFLIDQGI 556
Query: 203 RLVVLTLGS--DGVLLCSKEL--LSSMRIGLRK--TKPYGFSRD--LYKTVTSRCHSSRY 254
+ + L +++ EL + MRI T P+G R L + V + +S
Sbjct: 557 AQMAVNLLPIFQHLIIKCGELGAIVVMRIDPEDAATSPWGRQRSNPLARYVVVQGNSKEI 616
Query: 255 SGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISS 298
HFP L ++ +TGAGD VG LASIS+
Sbjct: 617 -----------IVLQHFPGLNVDNITNVTGAGDSFVGAVLASISN 650
>gi|423124873|ref|ZP_17112552.1| pseudouridine kinase [Klebsiella oxytoca 10-5250]
gi|376400318|gb|EHT12931.1| pseudouridine kinase [Klebsiella oxytoca 10-5250]
Length = 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL +G+ + + T
Sbjct: 35 IKYTPGGVGRNIAQNIALLNKTAWLLSVVGDDFYGHSLLNQTAQSGVHVDKCKIIPGEGT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I A+V++VD N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHQDFICGAAVIVVDCNISESALAWLM 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSG-ENMFRPIDR 178
+ + + P++ +PVS K +I+ + I + PN E ++ ALSG E++ R D
Sbjct: 154 ENSG--STPIFVDPVSAWKCVKISQHLGRIHTLKPNRIEAETLSGIALSGTEDVARVADW 211
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
H G++ +VL++G DGV K+
Sbjct: 212 FHH------------------HGLKRLVLSMGGDGVYYSEKD 235
>gi|423109357|ref|ZP_17097052.1| hypothetical protein HMPREF9687_02603 [Klebsiella oxytoca 10-5243]
gi|376383551|gb|EHS96279.1| hypothetical protein HMPREF9687_02603 [Klebsiella oxytoca 10-5243]
Length = 362
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ P L +A
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVILVDCNLTEPLLEWVFTLANA 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L GE + DR++
Sbjct: 212 --IPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGEPIENEADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A+ L E+G R VV+ D V CS+
Sbjct: 261 -------ALAWLHERGTRRVVICSEDDSV-FCSE 286
>gi|445495096|ref|ZP_21462140.1| pseudouridine-5'-phosphate glycosidase [Janthinobacterium sp. HH01]
gi|444791257|gb|ELX12804.1| pseudouridine-5'-phosphate glycosidase [Janthinobacterium sp. HH01]
Length = 393
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GGVARN+AE +S+L +++ALG D+AG L +H +SAG+ T G + ++ T
Sbjct: 106 VYGGVARNIAENLSRLNLPTALLTALGDDVAGRSLQDHAESAGIDTRGSLKLQETPTGTY 165
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ ILD GEL A+A + ++ LTP+++ S+A++ +VD NL ++A A
Sbjct: 166 TAILDDAGELVVALADMALYDR-LTPEFLSSRQPQRSAAAMTVVDLNLPADSIALLLDNA 224
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMA-NALSGENMFRPIDRNKHS 182
N+P+ VS K R+ + +K + ++ N EL A AL E R R +
Sbjct: 225 RADNVPLVIVAVSQPKMARLPAELKGLRLLILNRGELETRAGRALPTEADVRAACREVQA 284
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+G + V++T GS GV
Sbjct: 285 -----------------QGAQDVIVTCGSQGVF 300
>gi|386855561|ref|YP_006259738.1| RbsK family ribokinase, containing DNA-binding HTH domain
[Deinococcus gobiensis I-0]
gi|379999090|gb|AFD24280.1| RbsK family ribokinase, containing DNA-binding HTH domain
[Deinococcus gobiensis I-0]
Length = 393
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE +++LG+ +I+A+G D G++LLE +AG+ T +
Sbjct: 96 GGVARNVAENLARLGADTRLITAVGQDPVGDLLLERTAAAGVDVGPALLSPHCATGTYTA 155
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GEL AVA+++ ++ LTP+ +R ++ A ++ D NLS ALA +AA
Sbjct: 156 VLDAAGELVIAVAAMDVTDE-LTPEVLRARRGVLAGAGWIVADGNLSAEALAQLLTLAAG 214
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITV---VSPNEDELVAM 163
+ PV FEPVSV K+ R+ + V V+PN EL A+
Sbjct: 215 NSTPVVFEPVSVPKAARLRPALLAGPVPYAVTPNLGELGAL 255
>gi|423103980|ref|ZP_17091682.1| pseudouridine kinase [Klebsiella oxytoca 10-5242]
gi|376385622|gb|EHS98343.1| pseudouridine kinase [Klebsiella oxytoca 10-5242]
Length = 311
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL+ +G+ + + + T
Sbjct: 35 IKYTPGGVGRNIAQNIALLNKTAWLLSVVGDDFYGHSLLKQTAHSGVHVDKCQVIQGEGT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I +A+V++VD N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHQDFICNAAVIVVDCNISEAALAWLM 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSG-ENMFRPIDR 178
+ + PV+ +PVS K +I+ + I + PN E ++ ALSG +++ R D
Sbjct: 154 ENSGA--TPVFVDPVSAWKCVKISQHLGRIHTLKPNRLEAETLSGIALSGTDDVARVADW 211
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++G++ +VL++G DGV K+
Sbjct: 212 ------------------FHQRGLKRLVLSMGGDGVYYSEKD 235
>gi|320166183|gb|EFW43082.1| pfkB family carbohydrate kinase [Capsaspora owczarzaki ATCC 30864]
Length = 842
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 160/372 (43%), Gaps = 69/372 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGL-DMAGNILLEHWKSAGLSTEGIRRQKDID 59
V GGV RN+AE ++LG ++ISA+G DM + LL H +++G+ T + R +D
Sbjct: 437 VTQSFGGVGRNIAEGAARLGLPTHLISAVGASDMLSSGLLAHCEASGIDTSHVARMEDHS 496
Query: 60 TAVVSNILDVNGEL---AAAVASVESIEK------------------------------- 85
+V S I D G+L A A++E++ +
Sbjct: 497 ASVYSAIFDAKGDLVVGATDSAALEALPEAQIALSLSQLLNVPTTSSSDSLKPEHAEPQS 556
Query: 86 -FLTPDWIRQFIHHISSAS----VLMVDANLSPPALAASCKI-----AAECNIPVWFEPV 135
F TP Q S S ++ VD NLS + A ++ A + + +WFEP
Sbjct: 557 PFGTPFKFDQTTLAASPNSWDQRIVCVDGNLSRAQMRAVVQVVNRARAEQRRVHLWFEPT 616
Query: 136 SVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPA-- 193
SVTK ++ +++++++ +SPNE EL + L + RN + T P+
Sbjct: 617 SVTKLAKVDALLEHLSFISPNELELEELDRILHERYLCEHPKRNPKTRHFPPATTPPSES 676
Query: 194 -----------ILVLLEKGIRLVV------LTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
L + +G+R+ +++GS G ++ ++ + ++
Sbjct: 677 AKVKLNIWSELPLDFVHRGVRVTAWIPVVVVSVGSRGKVVFVRD---GAEVHIKHYPSDS 733
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
+ + + + +GA A S A PA+ VV +TGAGD V GT++++
Sbjct: 734 GWCSVEHELAQAVQAGKSAGAFTTAKSSA--ATSVPAMQLPVVNVTGAGDSGVAGTISAL 791
Query: 297 SSGLDVMQSVAV 308
GL + +V V
Sbjct: 792 LRGLPLDDAVKV 803
>gi|341874010|gb|EGT29945.1| hypothetical protein CAEBREN_10768 [Caenorhabditis brenneri]
Length = 304
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVARN A+ +++LG ISA+G D G +H +S I K T +
Sbjct: 21 LGGVARNHADALARLGCDSVFISAIGDDQNGQFFRQHSDKIDISRVKIIGHKPTCTYLAV 80
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
N V G + + + E + +TP I I SA +++D+NLS P +A + +IA
Sbjct: 81 N---VKGNVRFGIVTAEPLLSTITPALIESNEDAIQSADYILLDSNLSVPVMAKALEIAK 137
Query: 125 ECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ VW EP + K +++ T +V +T SPN +E + A
Sbjct: 138 KHEKQVWLEPTDIDKVKKVFDTGMVGAVTAASPNANEFLRWA 179
>gi|304317143|ref|YP_003852288.1| PfkB domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778645|gb|ADL69204.1| PfkB domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 368
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V LGGV RN+A ++ L +S +G D G ++ + G++ E I T
Sbjct: 90 VEITLGGVGRNIANNLALLDVPVTFLSIIGNDDEGKRIITETRKTGVNCEHIATSDTKHT 149
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I+D G + A++ +E +E+ L ++ + I I+++ ++++D N+ ++
Sbjct: 150 GIYLAIIDNTGNMDIAISGMEVLEE-LNVKYLEKKIDIINNSRIVVIDTNIPESSIEYVV 208
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A NIPV EPVS+ KS+++ V+ I ++PN DEL ++ L E + D K
Sbjct: 209 DACARKNIPVLAEPVSIDKSKKLKKVLGNIDYITPNRDELGSL---LETE-IINDNDMIK 264
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ E + + G + V++TLG GV L S E
Sbjct: 265 VTKE------------IRKLGTKNVIVTLGERGVYLSSNE 292
>gi|195350139|ref|XP_002041599.1| GM16751 [Drosophila sechellia]
gi|194123372|gb|EDW45415.1| GM16751 [Drosophila sechellia]
Length = 700
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 39/308 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKA--LKRGLIVADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHYQLFREAPLIIMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
IPV+FEP + + + + K I ++ PN EL + A++GE + D +
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNLQELKTITEAITGETVKWNPDTKQP 559
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYGFSRD 240
AE L Q K +++ ++ ++ TL GVLL + + + R+ L +KP
Sbjct: 560 QAE-LVQQAK-SLIKKIDSHFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKP------ 611
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISSG 299
+ HS+R+ +PA + ++V ++GAGD G + ++ G
Sbjct: 612 ------TPSHSTRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALLRG 649
Query: 300 LDVMQSVA 307
+ + +A
Sbjct: 650 RSLDECIA 657
>gi|125985317|ref|XP_001356422.1| GA15465 [Drosophila pseudoobscura pseudoobscura]
gi|54644746|gb|EAL33486.1| GA15465 [Drosophila pseudoobscura pseudoobscura]
Length = 697
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 35/307 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A L I+ + T++ S
Sbjct: 378 GGVGRNIAEGIYKLYGDVNLISAVGKDQMGETLLQLMPKA-LQRSMIQDESQA-TSLCSL 435
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E + +TP+ +R H A ++++D+N+S A+ + + A
Sbjct: 436 IFDKFGDCKLILGNMEIHQCSITPETLRAHRHLFRDAPLVIMDSNISEQAMECTLQQAQR 495
Query: 126 CNIPVWFEPVSVTKSRR----ITSVVKYITVVSPNEDELVAMANALSGENM-FRPIDRNK 180
+PV+FEP + + + + ++I ++ PN EL + A++G+ + ++P K
Sbjct: 496 YQLPVFFEPTDMFIAGKPFHLPPDLTQHIRLIKPNLQELKTIVEAITGQTVDWQP--NTK 553
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
L Q K +L +E ++ TLG GVLL S R +
Sbjct: 554 VERVQLLQQTK-DLLKKIESCFNCIIATLGDHGVLL-------SFRADAAND-----ASC 600
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
L TS P ++F+A P +P ++V ++GAGD G + ++ G
Sbjct: 601 LLDATTSEV----------PPHTTRFYAA--PIVP-NIVNVSGAGDSFCAGFITALLQGR 647
Query: 301 DVMQSVA 307
+ + VA
Sbjct: 648 ILDECVA 654
>gi|195575581|ref|XP_002077656.1| GD23033 [Drosophila simulans]
gi|194189665|gb|EDX03241.1| GD23033 [Drosophila simulans]
Length = 700
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 39/308 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKA--LKRGLIVADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHYQLFREAPLIIMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
IPV+FEP + + + + K I ++ PN EL + A++GE + D +
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNLQELKTITEAITGETVKWNPDTKQP 559
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYGFSRD 240
AE L Q K +++ ++ ++ TL GVLL + + + R+ L +KP
Sbjct: 560 QAE-LVQQAK-SLIKKIDSHFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKP------ 611
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISSG 299
+ HS+R+ +PA + ++V ++GAGD G + ++ G
Sbjct: 612 ------TPSHSTRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALLRG 649
Query: 300 LDVMQSVA 307
+ + +A
Sbjct: 650 RSLDECIA 657
>gi|393247540|gb|EJD55047.1| hypothetical protein AURDEDRAFT_155285 [Auricularia delicata
TFB-10046 SS5]
Length = 744
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 148/345 (42%), Gaps = 74/345 (21%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
V LGGVARNV+E +L S +++ +G D G L + G+ +G +
Sbjct: 379 VRTALGGVARNVSEAAHRLSSSSVVLVAPIGSDAFGTTLRDGTAELGMRVDGFVAAET-- 436
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T V + +LD G L VA +++ + ++ D I I + ++ +DANLSP A+A
Sbjct: 437 TPVCNMLLDAGGALVCGVADMDAPVE-MSADEIIGAIERYAP-RLVALDANLSPDAIA-- 492
Query: 120 CKIAAEC---NIPVWFEPVSVTKSRRITSVVK-------------YITVVSPNEDELVAM 163
++ A C +IP +FEP SV K+ I K +T+ SPN EL +
Sbjct: 493 -RVLAHCRMKSIPTFFEPTSVAKAGAILPAFKAWAGEDGDSDGDGAVTLASPNARELAVL 551
Query: 164 ANALSGENM------FRPIDR-------NKHSA-----ESLFQTLKPAILVLLEKGI--- 202
A+A ++ +R +DR +H A + + K + LL GI
Sbjct: 552 ADAARAHDLLDTPKYWRALDRLGLEAGYRQHLALLAGRPASASSDKGDLGFLLRDGIVQN 611
Query: 203 --------RLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRY 254
R +++ LG GVL+ + S+ D T + +
Sbjct: 612 AVALLPFVRHLMVQLGDKGVLVAMRPAAGSV-------------WDRQATNIAHGQVVAH 658
Query: 255 SGAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASI 296
GA G+ HFPAL P VV +TGAGD LVG LA +
Sbjct: 659 GGA-----GAAVVLRHFPALDVAPHEVVSVTGAGDSLVGAVLAGL 698
>gi|310780434|ref|YP_003968766.1| PfkB domain-containing protein [Ilyobacter polytropus DSM 2926]
gi|309749757|gb|ADO84418.1| PfkB domain protein [Ilyobacter polytropus DSM 2926]
Length = 370
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN GGVARN+AE +SK+G +++ +G D GN LL++ + G+ T + T
Sbjct: 88 VNKSFGGVARNIAENISKIGIDTKLLTLVGDDSHGNDLLDYCRKKGIDTSYSLSLQGKST 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ +ILD N ++A A++ ++ + K + +I + I +S+ +VD N+ L
Sbjct: 148 STYISILDKNKDMAVAISHMDIMTK-MDISFITKRASVIQGSSLCVVDTNIPFETLEYIL 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K + V + VS+ KS++I +++ YI + PN+ E A LSG N+
Sbjct: 207 KNFIKTKFIV--DTVSLEKSKKIKNLLPYIDTLKPNKIE----AEELSGINI-------- 252
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ Q ++ A +++EKG++ + ++LG +GV
Sbjct: 253 ----NTKQDVEKAAEIIVEKGVKNIFISLGKEGV 282
>gi|195147196|ref|XP_002014566.1| GL18885 [Drosophila persimilis]
gi|194106519|gb|EDW28562.1| GL18885 [Drosophila persimilis]
Length = 697
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 35/307 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A L I+ + T++ S
Sbjct: 378 GGVGRNIAEGIYKLYGDVNLISAVGKDQMGETLLQLMPKA-LQRSMIQDESQA-TSLCSL 435
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E + +TP+ +R H A ++++D+N+S A+ + + A
Sbjct: 436 IFDKFGDCKLILGNMEIHQCSITPETLRAHRHLFRDAPLVIMDSNISEQAMECTLQQAQR 495
Query: 126 CNIPVWFEPVSVTKSRR----ITSVVKYITVVSPNEDELVAMANALSGENM-FRPIDRNK 180
+PV+FEP + + + + ++I ++ PN EL + A++G+ + ++P K
Sbjct: 496 YQLPVFFEPTDMFIAGKPFHLPPDLTQHIRLIKPNLQELKTIVEAITGQTVDWQP--NTK 553
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
L Q K +L +E ++ TLG GVLL S R +
Sbjct: 554 VERVQLLQQTK-DLLKKIESCFNCIIATLGDHGVLL-------SFRADAAND-----ASC 600
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
L TS P ++F+A P +P ++V ++GAGD G + ++ G
Sbjct: 601 LLDATTSEV----------PPHTTRFYAA--PIVP-NIVNVSGAGDSFCAGFITALLQGR 647
Query: 301 DVMQSVA 307
+ + VA
Sbjct: 648 ILDECVA 654
>gi|345496204|ref|XP_003427673.1| PREDICTED: uncharacterized sugar kinase yeiI-like [Nasonia
vitripennis]
Length = 316
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 42/299 (14%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+ + LG + ++S +G D AG ++ S G + +R D+ TA +
Sbjct: 15 GGVGRNLTAALVNLGITDTKLLSVIGDDEAGRAVIS---SLGKAASALRTATDVGTARYT 71
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++D +G + +E+ K + I + A +L++D N S A+ + I++
Sbjct: 72 AVVDKDGNCCFGIGEMEAFSK-INSRLIEENADIFKDAPLLVIDGNSSLDAIKLALDISS 130
Query: 125 ECNIPVWFEPVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IPVW+EP + K+ +I + + VSPN +EL+AMA ++ P D +K
Sbjct: 131 RNQIPVWYEPTDLQKALKIFQCGSPWKNVLHFVSPNVNELLAMAKYF---DVPTPSDESK 187
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
E++ I L K I +++ TLG+ GVL+ K KP+ ++
Sbjct: 188 IDIETVKN-----ITEELNKWIPVIIATLGAQGVLITRK---------CSTNKPF-LNKS 232
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
+ S YS + +V ++G GDCL G + I G
Sbjct: 233 NNPIEDGKTESRLYSPL---------------SYDGEIVSVSGCGDCLAAGIITGILRG 276
>gi|312870594|ref|ZP_07730708.1| kinase, PfkB family [Lactobacillus oris PB013-T2-3]
gi|311093869|gb|EFQ52199.1| kinase, PfkB family [Lactobacillus oris PB013-T2-3]
Length = 311
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 113/217 (52%), Gaps = 22/217 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV +N+A+ ++ L Y+++ G DM G ++ + K ++ E K ++
Sbjct: 39 VGGVGQNIAQNLAHLRVPTYLVTVYGDDMNGAVMKQACKKNNINLEYAEEIKGQRSSGYM 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
I D G++ + ++ E +TPD++++ + ++ A ++MVDANL A S K +
Sbjct: 99 YITDETGDMLVGINDMKICEN-ITPDFLQRRLDFMNRAELVMVDANLQ----AESIKWLG 153
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+P++ +PVSV+K+ R+ ++ I + PN+ E A L+G + +
Sbjct: 154 EHLTVPIFADPVSVSKAPRVEPILSKIDTLKPNKLE----AELLTGIKI-----NDNADV 204
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
ES Q LL+ G++ V ++LG+DG+L +KE
Sbjct: 205 ESAAQK-------LLDMGVKNVFISLGADGILAANKE 234
>gi|343492111|ref|ZP_08730484.1| ribokinase-like domain-containing protein [Vibrio nigripulchritudo
ATCC 27043]
gi|342827451|gb|EGU61839.1| ribokinase-like domain-containing protein [Vibrio nigripulchritudo
ATCC 27043]
Length = 363
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 65/290 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG++ +IS +G D G ++++ + AG+ + + D T+ +
Sbjct: 93 GGVGRNIAENIARLGTEVRLISVVGNDTYGQLIIDKTRQAGVDVSPVMKLSDGTTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ +G++ AV+ + ++K LT + + I + A V++VD NLS L A+
Sbjct: 153 LLNEDGDMQVAVSDMSILDK-LTIESLEPHIEVLKRAEVIVVDTNLSESVLEYIFSQFAD 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
P++ + VS TK+ +I + +I + PN + A +LS D H+A+
Sbjct: 212 K--PIFVDTVSSTKAVKIKPYLSHIHTLKPN----IKEAQSLS--------DLPHHNADD 257
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L +T+ L +G + + L+LG +GV F +D
Sbjct: 258 L-ETIADW---FLNQGTQRIFLSLGEEGV----------------------FYKD----- 286
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295
A GSQ HFP + + GAGD + G + S
Sbjct: 287 ---------------AQGSQ----HFPTVSTDIKNANGAGDAFLAGLVHS 317
>gi|423109360|ref|ZP_17097055.1| pseudouridine kinase [Klebsiella oxytoca 10-5243]
gi|423115297|ref|ZP_17102988.1| pseudouridine kinase [Klebsiella oxytoca 10-5245]
gi|376381383|gb|EHS94120.1| pseudouridine kinase [Klebsiella oxytoca 10-5245]
gi|376383554|gb|EHS96282.1| pseudouridine kinase [Klebsiella oxytoca 10-5243]
Length = 311
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL+ +G+ + + T
Sbjct: 35 IKYTPGGVGRNIAQNIALLNKPSWLLSVVGDDFYGHSLLKQTAQSGVHVDKCQIVHGEGT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++ Q I SA+V++VD N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLSQHRDFIRSAAVIVVDCNISESALAWLM 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSG-ENMFRPIDR 178
+ + P++ +PVS K +I+ + I + PN E ++ ALSG +++ R D
Sbjct: 154 ENSGP--TPIFVDPVSAWKCVKISQHLGRIHTLKPNRIEAETLSGIALSGTDDVARVADW 211
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++G+R +VL++G DGV K+
Sbjct: 212 ------------------FHQRGLRRLVLSMGGDGVYFSEKD 235
>gi|170725806|ref|YP_001759832.1| ribokinase-like domain-containing protein [Shewanella woodyi ATCC
51908]
gi|169811153|gb|ACA85737.1| PfkB domain protein [Shewanella woodyi ATCC 51908]
Length = 363
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 110/210 (52%), Gaps = 19/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS+ ++SA+G D G +++ + AG+ + + KD T+ +
Sbjct: 93 GGVGRNIAENLARLGSQTRLLSAVGKDTYGQAIIDQCQQAGIDMQACLQLKDASTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD + ++ A+ + +++ L+ + ++ + A +L++DANLS PAL ++
Sbjct: 153 VLDGDSDMHVAINDMAILDR-LSVELLKAQEEMLRRADLLILDANLSAPAL--EYLLSNF 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P++ + VS K+++I + I + PN E A LSG ++
Sbjct: 210 SDRPIFVDTVSCAKAKKIQPFLSAIHTLKPNLKE----AEQLSGISIAN----------- 254
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+ L E+G++ + L+LG+DGV
Sbjct: 255 -YGELPKLGHWFHEQGVQRIFLSLGADGVF 283
>gi|432450330|ref|ZP_19692595.1| pseudouridine kinase [Escherichia coli KTE193]
gi|433034009|ref|ZP_20221725.1| pseudouridine kinase [Escherichia coli KTE112]
gi|430979720|gb|ELC96485.1| pseudouridine kinase [Escherichia coli KTE193]
gi|431551015|gb|ELI25002.1| pseudouridine kinase [Escherichia coli KTE112]
Length = 313
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + LGGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTLGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|238764534|ref|ZP_04625481.1| Uncharacterized sugar kinase yeiI [Yersinia kristensenii ATCC
33638]
gi|238697236|gb|EEP90006.1| Uncharacterized sugar kinase yeiI [Yersinia kristensenii ATCC
33638]
Length = 372
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE ++ LG + ++IS +G D G L++ K AG++ +T+ +
Sbjct: 102 GGVGRNIAENIALLGKECHLISVVGDDFYGATLIDEAKRAGVNVSNCHSLHGENTSTYVS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A+ + +EK LTP + I A +L+VD NL+ +L+ A
Sbjct: 162 LLDNSGEMLVAINDMRILEK-LTPSLLATTKELIQHAGILVVDCNLTEESLSWIFTNAG- 219
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+PV+ + VS K+ RI + + +I + PN E A LSG + RN
Sbjct: 220 -NVPVFVDTVSAFKAPRIKNWLSHIHTLKPNRLE----AEILSG---MKIDSRND----- 266
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGV 214
PA+ ++G++ + L++G DGV
Sbjct: 267 -----IPAVANWFHQQGVQRLALSMGKDGV 291
>gi|238787941|ref|ZP_04631737.1| Uncharacterized sugar kinase yeiI [Yersinia frederiksenii ATCC
33641]
gi|238723889|gb|EEQ15533.1| Uncharacterized sugar kinase yeiI [Yersinia frederiksenii ATCC
33641]
Length = 372
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE ++ LG + ++IS +G D G L++ K AG++ +T+ +
Sbjct: 102 GGVGRNIAENIALLGKECHLISVVGDDFYGATLIDEAKRAGVNVSNCHSLHGENTSTYVS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A+ + +EK LTP + I A +L+VD NL+ +L+ A
Sbjct: 162 LLDNSGEMLVAINDMRILEK-LTPSLLATTKELIQHAGILVVDCNLTEESLSWIFTNAG- 219
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+PV+ + VS K+ RI + + +I + PN E A LSG + D
Sbjct: 220 -NVPVFVDTVSAFKAPRIKNWLSHIHTLKPNRLE----AEILSGIKINHQDD-------- 266
Query: 186 LFQTLKPAILVLL-EKGIRLVVLTLGSDGV 214
PA+ ++G++ + L++G DGV
Sbjct: 267 -----IPAVANWFHQQGVQRLALSMGKDGV 291
>gi|163748980|ref|ZP_02156231.1| Sugar kinase, ribokinase family protein [Shewanella benthica KT99]
gi|161331356|gb|EDQ02244.1| Sugar kinase, ribokinase family protein [Shewanella benthica KT99]
Length = 374
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 67/287 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS+ +ISA+G D G +++ + AG+ +G + D +T+ +
Sbjct: 104 GGVGRNIAENLARLGSQTRLISAIGKDTYGQMIMNQCQQAGIDMKGCLQLNDANTSTYLS 163
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +G++ A+ + +E+ L+ + +++ + A ++++DANLS +L +
Sbjct: 164 VLDGDGDMHVAINDMAILER-LSVEVLKEKEELLRRADLIILDANLSAESL--EYLLNNF 220
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P++ + VS K+++I + + + PN E A LSG I +S
Sbjct: 221 SDRPIFVDTVSCVKAKKIKPFLSSVHTLKPNLKE----AEQLSG------IIIEDYSE-- 268
Query: 186 LFQTLKPAILVLLE-KGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
PA+ +G++ + L+LGSDGV +
Sbjct: 269 -----LPALANWFHNQGVKRIFLSLGSDGVFYSDE------------------------- 298
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGG 291
G+Q H PA+P ++V GAGD + G
Sbjct: 299 ------------------GAQ---AHIPAIPIAMVNANGAGDAFLAG 324
>gi|238793967|ref|ZP_04637586.1| Uncharacterized sugar kinase yeiI [Yersinia intermedia ATCC 29909]
gi|238726734|gb|EEQ18269.1| Uncharacterized sugar kinase yeiI [Yersinia intermedia ATCC 29909]
Length = 372
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE ++ LG + ++IS +G D G L++ K AG++ +T+ +
Sbjct: 102 GGVGRNIAENIALLGKECHLISVVGDDFYGATLIDEAKRAGVNVSNCHSLHGENTSTYVS 161
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +EK LTP + I A +L+VD NL+ AL+ A
Sbjct: 162 LLDDGGEMLVAINDMRILEK-LTPSLLATTKEIIQHAGILVVDCNLTEEALSWIFTNAG- 219
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+PV+ + VS K+ RI + + +I + PN E A LSG I N H
Sbjct: 220 -NVPVFVDTVSAFKAPRIKNWLSHIHTLKPNRLE----AEILSG------IKINSHD--- 265
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ ++G++ + L++G +GV
Sbjct: 266 ---DIPTVAQWFHQQGVQRLALSMGKEGV 291
>gi|269120524|ref|YP_003308701.1| PfkB domain-containing protein [Sebaldella termitidis ATCC 33386]
gi|268614402|gb|ACZ08770.1| PfkB domain protein [Sebaldella termitidis ATCC 33386]
Length = 363
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV +N+AE +++L I+ G D+ G + +H + ++ +T++
Sbjct: 92 FGGVGKNIAENIARLDINTKFITVFGNDLYGEKIKDHLNKLDIDVSDSLILENEETSIYL 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD NGE+ A++S+E +K L P++++ I A +++VD NL A+ + +
Sbjct: 152 SILDSNGEMNVAISSMEIFKK-LKPEYLKARNKKIEGAEIIIVDTNLEKEAI--NYIMGY 208
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + VS KS ++ ++ + PN+ E A LSG I N S
Sbjct: 209 NTKTKIMLDTVSTKKSEKVKDIIGKFHTIKPNKIE----AELLSG------IKINSDS-- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
L A LE GI+ + +TLGSDGV
Sbjct: 257 ----DLDRAGKFFLEAGIKNIFITLGSDGV 282
>gi|127513653|ref|YP_001094850.1| ribokinase-like domain-containing protein [Shewanella loihica PV-4]
gi|126638948|gb|ABO24591.1| PfkB domain protein [Shewanella loihica PV-4]
Length = 363
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 65/315 (20%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS +++A+G D G ++EH + AG+ + + D T+ +
Sbjct: 93 GGVGRNIAENLARLGSDTRLMTAVGKDAYGQQIVEHCQRAGIDMKPSLQLSDGVTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD + ++ A+ + +E+ L + ++ + AS+ ++DANLS ALA ++
Sbjct: 153 VLDGDSDMHVAINDMAILER-LGVEQLKSQQEMLKRASLAIIDANLSEAALA--YLLSNF 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP++ + VS K+ +I + + + PN E A LSG ++
Sbjct: 210 ADIPLFVDTVSCAKAEKIKPYLGAVHTLKPNLKE----AEQLSGISIAN----------- 254
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ L E+G++ V L+LG DGV
Sbjct: 255 -YGELPVLANWFHEQGVKRVFLSLGIDGVF------------------------------ 283
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
YS E A H PA+P +V GAGD + G G QS
Sbjct: 284 --------YSDGEEQA--------HIPAIPVEMVNANGAGDAFLAGLAHGFMQGWSTRQS 327
Query: 306 VAVDDAKTVYAAANV 320
A V A +++
Sbjct: 328 TEFAMAAAVVALSDL 342
>gi|150388537|ref|YP_001318586.1| ribokinase-like domain-containing protein [Alkaliphilus
metalliredigens QYMF]
gi|149948399|gb|ABR46927.1| PfkB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 373
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V +GGV RN+A +S L + +I+ALG D G+ +L ++ G+ + + +
Sbjct: 92 VEMSVGGVGRNIAHNLSLLQIQTQLITALGKDAYGDQILIESRAGGVRVDHSLILEGESS 151
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V +LD GE+ A++ ++ E+ L+P ++ + H ++ A V++VD NL+ A+
Sbjct: 152 GVYLALLDEAGEMNLALSQMDIFER-LSPGFLEEKRHVLAHAKVIVVDTNLTRNAIEYII 210
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A IP++ + VS+ K+ ++ +V + PN EL L+G + D
Sbjct: 211 GVAEREGIPLFLDTVSIAKAEKVKDLVGCFHTIKPNVMEL----EMLTGHQIENDAD--- 263
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LK LL KG++ VV++LG+ G E
Sbjct: 264 ---------LKKGAEALLAKGVQEVVISLGNKGAFYHDGE 294
>gi|84497840|ref|ZP_00996637.1| carbohydrate kinase, PfkB family protein [Janibacter sp. HTCC2649]
gi|84381340|gb|EAP97223.1| carbohydrate kinase, PfkB family protein [Janibacter sp. HTCC2649]
Length = 381
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ ++++++G D G+ LL H + AG+ + + T
Sbjct: 95 GGVGRNIAENLARLGTPTHLVASVGSDSFGDELLAHTRGAGVQLDHVVTGSR-PTGTYLA 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +G+L+ AV+ + + + D I I + +L+VD N+ C IA
Sbjct: 154 VLDHDGDLSVAVSDMSATDALTVAD-IEPARSLIQNCDLLVVDGNIPIEVATWLCDIANS 212
Query: 126 CNIPVWFEPVSVTKSRRITSVV---KYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
++PV EPVSV K+RR+ ++ + I V+PN EL A+ H
Sbjct: 213 ADVPVVIEPVSVVKARRLRPLLAPDRPILAVTPNIAELAALVG---------------HD 257
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ A L G+R V + G+ G LL S
Sbjct: 258 VADTIPEISRATTELHALGVRHVWVRRGARGSLLSS 293
>gi|373463940|ref|ZP_09555518.1| kinase, PfkB family [Lactobacillus kisonensis F0435]
gi|371763647|gb|EHO52108.1| kinase, PfkB family [Lactobacillus kisonensis F0435]
Length = 317
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 22/221 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V +GGV +N+A+ ++ L Y+I+ G D G +L E + + + + K +
Sbjct: 40 VGMTVGGVGQNIAQNLAHLDVPTYLITVYGDDYNGRLLEESCQRNNIHLDYAAQLKGERS 99
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I D +G++ V + I ++++P ++++ + I++A V +VDANL+ +
Sbjct: 100 STYMYITDEHGDMLVGVNDM-GICEYISPSFLKKRLDFINNAKVCLVDANLNKQTIDW-- 156
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN- 179
I P++ + VS K+R ++ +T + PN E A+ L+G ID N
Sbjct: 157 -IGQNVTAPIFGDTVSCAKARHFEGILDKMTTLKPNALE----ASLLTG------IDIND 205
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+HSA+ Q+ LL KGI+ V ++LG+DG+L + +
Sbjct: 206 EHSAKQAAQS-------LLNKGIKNVFISLGADGILCANNQ 239
>gi|350269423|ref|YP_004880731.1| pseudouridine kinase [Oscillibacter valericigenes Sjm18-20]
gi|348594265|dbj|BAK98225.1| pseudouridine kinase [Oscillibacter valericigenes Sjm18-20]
Length = 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 134/326 (41%), Gaps = 75/326 (23%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V LGGV RN+A M+ LG +++ G D+ + + G+ T
Sbjct: 88 VRMSLGGVGRNIAHNMALLGLDVRLLTVFGDDLNAQKIAANCAELGIDVSHSPFLPGEHT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I D G+++ AV ++ I K LTP ++ Q + A V++ DAN PPA C
Sbjct: 148 STYLFITDERGDMSLAVNDMD-IYKRLTPQFLAQRQKMLDGAQVVVADAN--PPA-ETLC 203
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A C P++ +PVS K+ +I ++ + + PN E A LSG + R++
Sbjct: 204 YLADHCAAPIFCDPVSTAKAEKIRPILGKLHTLKPNRME----AELLSGVKI-----RDE 254
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S L+ A LLE G+R V ++LGSDG F+ D
Sbjct: 255 KS-------LRLAAEKLLETGLRRVFISLGSDGA----------------------FAAD 285
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
H+ A+H P +P ++V TG GD + + G
Sbjct: 286 ---------HAQ---------------AIHLPVIPGAMVNTTGCGDAFMAAITWAYLRGT 321
Query: 301 DVM---------QSVAVDDAKTVYAA 317
D+ S+A++ +T+ A
Sbjct: 322 DLTGTARMGLAASSIAMESGETINPA 347
>gi|347759608|ref|YP_004867169.1| carbohydrate kinase PfkB [Gluconacetobacter xylinus NBRC 3288]
gi|347578578|dbj|BAK82799.1| carbohydrate kinase PfkB [Gluconacetobacter xylinus NBRC 3288]
Length = 384
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNV E +++LG ++S +G D+ G+ L +H KS G+ T I+ + TA
Sbjct: 102 FGGVARNVCENLARLGQATALVSIVGDDLPGHALADHMKSCGVDTSRIQFAGNASTAEYI 161
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD +L AV E+ L D+IR+ I++A L VD N+S LA + A
Sbjct: 162 AILDDRHDLGVAVFDAVVFER-LDIDYIRRCWPLIAAAGWLFVDCNVSVEVLAWLTRKAR 220
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163
E + + + VSV K++R+ + + V+ N DE + +
Sbjct: 221 EGSFSLAVDTVSVPKAQRLRGQLDGVQVLFTNRDEALTL 259
>gi|78045094|ref|YP_358948.1| PfkB family kinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77997209|gb|ABB16108.1| kinase, PfkB family [Carboxydothermus hydrogenoformans Z-2901]
Length = 364
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE +++LG +I+A+G D G ++E + AG++ E I ++V
Sbjct: 93 VGGVARNIAENLARLGVATRLITAIGDDFYGKYIIERCRDAGVNMEEILTVSGESSSVYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++D G++A AVA ++ I L+ D++++ + I+S+ V +VD NL +L A
Sbjct: 153 AVMDEAGDMAVAVAGMD-ILNHLSLDFLKKKLSIINSSPVCVVDTNLPVKSLEFLLDNAR 211
Query: 125 ECNIPVWF-EPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ V+F + VSVTK+ ++ + V N+ E A ++GEN+ N +
Sbjct: 212 KT---VFFLDGVSVTKALKLKELRGTFYAVKLNKLE----AEGVTGENL------NTEAG 258
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
L A L+KGI+ V TLG+ GV + + S +I L +P
Sbjct: 259 ------LLKAANFFLDKGIKQVYFTLGAQGVFYANTK--SRGKITLPPVQP 301
>gi|417708202|ref|ZP_12357235.1| hypothetical protein SFVA6_3020 [Shigella flexneri VA-6]
gi|420332124|ref|ZP_14833780.1| pseudouridine kinase [Shigella flexneri K-1770]
gi|333001302|gb|EGK20870.1| hypothetical protein SFVA6_3020 [Shigella flexneri VA-6]
gi|391251019|gb|EIQ10238.1| pseudouridine kinase [Shigella flexneri K-1770]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS +K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSASKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|158319700|ref|YP_001512207.1| ribokinase-like domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158139899|gb|ABW18211.1| PfkB domain protein [Alkaliphilus oremlandii OhILAs]
Length = 364
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E + KLG + +IS +G D+ G +LE + GL + K T+
Sbjct: 92 LGGVGRNIGENLVKLGIRTNLISVIGDDVYGGKILEESRLIGLGMQDSLILKGESTSTYL 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+IL+ G++A A++ ++ ++ +T D+I+ H I ++ + +VD N+ PA + A
Sbjct: 152 SILNEQGDMAVAISHMDIYDR-MTVDFIKDKKHVIENSRLCVVDTNI--PASVIEYVLTA 208
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + + VS TK++R+ + Y V N+ E ++G PI+ +
Sbjct: 209 HKTLDFFLDTVSTTKAKRVKDFIGYFHTVKTNKIE----TEVITG----MPINDERD--- 257
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L+ A L G++ V +TLG +GV
Sbjct: 258 -----LENAADYLHRAGVKRVFITLGEEGVF 283
>gi|422834081|ref|ZP_16882145.1| pseudouridine kinase [Escherichia coli E101]
gi|371603508|gb|EHN92163.1| pseudouridine kinase [Escherichia coli E101]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTSGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K R+ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVRVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|324505612|gb|ADY42410.1| Pseudouridine-metabolizing protein [Ascaris suum]
Length = 552
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 48/305 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN A+ +++LG ++IS +G D + K L+ + K++ TA +
Sbjct: 261 GGVGRNHADALTRLGIDVHLISVVGDDSHAEFVRSRCKHMDLT--NVLSIKELPTATYT- 317
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
V G + +++++ I + +TP+ I+Q H IS A +++D N+ + + IA
Sbjct: 318 AFAVKGNVQYGISNIDRIIEEITPEVIKQREHLISDADYVLLDGNIPVATINTAVSIADF 377
Query: 126 CNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
VW+EP +V K R+I V + ++SPN +E A +L E + H+
Sbjct: 378 YGTKVWYEPTAVAKMRKIFDAGVDHMVDIISPNLNEFAAYC-SLIDEKLPDNFLTTMHAN 436
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
E +F+ L + L + + +++T+G G +L ++ S R L
Sbjct: 437 E-IFEHLWSKVNQYL-RSLEALIVTIGPKGTILLKRDGSSITRHQLPP------------ 482
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVM 303
P P VV +GAGDC G LA I L +
Sbjct: 483 ----------------------------PLSPEIVVSTSGAGDCFNSGLLAGILYDLSID 514
Query: 304 QSVAV 308
+S+ +
Sbjct: 515 ESLCL 519
>gi|24580669|ref|NP_608533.1| CG2794 [Drosophila melanogaster]
gi|7296188|gb|AAF51480.1| CG2794 [Drosophila melanogaster]
Length = 700
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKA--LKRGLIVADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHHQLFREAPLIIMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENM-FRPIDRNK 180
IPV+FEP + + + + K I ++ PN EL + A++GE + + P K
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNMQELKTITEAITGETVKWNP--ETK 557
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYGFSR 239
L Q K +++ ++ ++ TL GVLL + + + R+ L +KP
Sbjct: 558 QPQTELVQQAK-SLIKKIDSHFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKP----- 611
Query: 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISS 298
+ HS+R+ +PA + ++V ++GAGD G + ++
Sbjct: 612 -------TPPHSTRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALLR 648
Query: 299 GLDVMQSVA 307
G + + +A
Sbjct: 649 GRSLDECIA 657
>gi|421725100|ref|ZP_16164300.1| kinase [Klebsiella oxytoca M5al]
gi|410374098|gb|EKP28779.1| kinase [Klebsiella oxytoca M5al]
Length = 362
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ +L +
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVVLVDCNLTEQSLEWVFTLTNA 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L GE + DR++
Sbjct: 212 --IPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGEPIENEADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
A+ L E+G + VV+ L D + CS+ R+ L
Sbjct: 261 -------ALAWLHERGTQRVVIYL-EDDTIFCSEAGGERFRMSL 296
>gi|432675282|ref|ZP_19910742.1| pseudouridine kinase [Escherichia coli KTE142]
gi|431214258|gb|ELF12083.1| pseudouridine kinase [Escherichia coli KTE142]
Length = 313
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQLREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|21064807|gb|AAM29633.1| RH71315p [Drosophila melanogaster]
Length = 700
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKA--LKRGLIVADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHHQLFREAPLIIMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENM-FRPIDRNK 180
IPV+FEP + + + + K I ++ PN EL + A++GE + + P K
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNMQELKTITEAITGETVKWNP--ETK 557
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYGFSR 239
L Q K +++ ++ ++ TL GVLL + + + R+ L +KP
Sbjct: 558 QPQTELVQQAK-SLIKKIDSRFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKP----- 611
Query: 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISS 298
+ HS+R+ +PA + ++V ++GAGD G + ++
Sbjct: 612 -------TPPHSTRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALLR 648
Query: 299 GLDVMQSVA 307
G + + +A
Sbjct: 649 GRSLDECIA 657
>gi|418257127|ref|ZP_12880811.1| pseudouridine kinase [Shigella flexneri 6603-63]
gi|420373516|ref|ZP_14873612.1| pseudouridine kinase [Shigella flexneri 1235-66]
gi|391317175|gb|EIQ74527.1| pseudouridine kinase [Shigella flexneri 1235-66]
gi|397897280|gb|EJL13689.1| pseudouridine kinase [Shigella flexneri 6603-63]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSARKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|417702901|ref|ZP_12352012.1| hypothetical protein SFK218_3145 [Shigella flexneri K-218]
gi|417738992|ref|ZP_12387572.1| hypothetical protein SF434370_2329 [Shigella flexneri 4343-70]
gi|332754803|gb|EGJ85168.1| hypothetical protein SF434370_2329 [Shigella flexneri 4343-70]
gi|333001761|gb|EGK21327.1| hypothetical protein SFK218_3145 [Shigella flexneri K-218]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSARKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|331673689|ref|ZP_08374452.1| putative kinase [Escherichia coli TA280]
gi|331068962|gb|EGI40354.1| putative kinase [Escherichia coli TA280]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A+V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRANVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKV--- 208
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S F + G+ +VL++G DGV
Sbjct: 209 ----ASWFH----------QHGLNRLVLSMGGDGV 229
>gi|416898206|ref|ZP_11927770.1| hypothetical protein ECSTEC7V_2577 [Escherichia coli STEC_7v]
gi|417115348|ref|ZP_11966484.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2741]
gi|422799451|ref|ZP_16847950.1| pfkB family protein carbohydrate kinase [Escherichia coli M863]
gi|323968095|gb|EGB63505.1| pfkB family protein carbohydrate kinase [Escherichia coli M863]
gi|327252410|gb|EGE64069.1| hypothetical protein ECSTEC7V_2577 [Escherichia coli STEC_7v]
gi|386140767|gb|EIG81919.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2741]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNLIHTLKPNRLEAETLSGIALSGREDVEKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|425422984|ref|ZP_18804152.1| pseudouridine kinase [Escherichia coli 0.1288]
gi|408343539|gb|EKJ57933.1| pseudouridine kinase [Escherichia coli 0.1288]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|417608796|ref|ZP_12259299.1| hypothetical protein ECSTECDG1313_3196 [Escherichia coli
STEC_DG131-3]
gi|345358005|gb|EGW90193.1| hypothetical protein ECSTECDG1313_3196 [Escherichia coli
STEC_DG131-3]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|416286615|ref|ZP_11648514.1| Pseudouridine kinase [Shigella boydii ATCC 9905]
gi|320178880|gb|EFW53843.1| Pseudouridine kinase [Shigella boydii ATCC 9905]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|330992494|ref|ZP_08316442.1| Putative sugar kinase yeiI [Gluconacetobacter sp. SXCC-1]
gi|329760693|gb|EGG77189.1| Putative sugar kinase yeiI [Gluconacetobacter sp. SXCC-1]
Length = 379
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 65/301 (21%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNV E +++LG + +I+ +G D+ G+ L +H K+ G++T I+ + TA
Sbjct: 98 FGGVARNVCENLARLGQETTLITIVGDDLPGHALADHMKNCGVNTSRIQFAGNASTAEYI 157
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD + +L AV ++ L D I++ I++A L VD N+S LA +
Sbjct: 158 AILDDSHDLGIAVFDAAVFDR-LDIDTIQRSWPLIAAAGWLFVDCNVSAEVLAWLAQKTR 216
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E + + VSV K+ R+ + + V+ N DE + + L G
Sbjct: 217 EAGFSLAVDTVSVPKAERLRGQLGGVRVLFTNRDEALTL---LEG--------------- 258
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
S T + L+ +G+ V++T G+ G+ + G+R
Sbjct: 259 STATTSAAIAMALVAQGVETVIMTEGARGLTVADAS-------GVRA------------- 298
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
PA +VV +TGAGD LV TL+++S D ++
Sbjct: 299 --------------------------LPAYRTNVVDVTGAGDALVAATLSALSENTDTVR 332
Query: 305 S 305
+
Sbjct: 333 A 333
>gi|110806142|ref|YP_689662.1| hypothetical protein SFV_2241 [Shigella flexneri 5 str. 8401]
gi|424838547|ref|ZP_18263184.1| hypothetical protein SF5M90T_2184 [Shigella flexneri 5a str. M90T]
gi|110615690|gb|ABF04357.1| putative kinase [Shigella flexneri 5 str. 8401]
gi|383467599|gb|EID62620.1| hypothetical protein SF5M90T_2184 [Shigella flexneri 5a str. M90T]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|407789269|ref|ZP_11136371.1| PfkB domain-containing protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207247|gb|EKE77190.1| PfkB domain-containing protein [Gallaecimonas xiamenensis 3-C-1]
Length = 366
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A+ +++LGS +SALG D G LL + +G+ +G+ R T V +
Sbjct: 93 GGVARNIADNLARLGSPVQFVSALGDDDWGERLLAACRQSGMGLDGLLRVPGARTCVYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE+ A++ +E +++ L ++ + A++ ++DANL ALA A
Sbjct: 153 VHDNSGEMQLALSDMEVLKR-LDAKALQDRSGLVDRAAIWVLDANLDEEALA--WLFARH 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
PV +PVS K+ ++ + I + PN E A L+G R DR A +
Sbjct: 210 AGQPVLVDPVSTAKAPKLKPYLGQIQCLKPNALE----AGVLTG---IRVTDRASAQAAA 262
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+G+ V+LTLG+DG LL +++
Sbjct: 263 QALV---------AQGVGEVLLTLGADGALLANQQ 288
>gi|300819140|ref|ZP_07099342.1| kinase, PfkB family [Escherichia coli MS 107-1]
gi|415876022|ref|ZP_11542595.1| kinase, PfkB family [Escherichia coli MS 79-10]
gi|300528293|gb|EFK49355.1| kinase, PfkB family [Escherichia coli MS 107-1]
gi|342928953|gb|EGU97675.1| kinase, PfkB family [Escherichia coli MS 79-10]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|402843992|ref|ZP_10892371.1| HTH domain protein [Klebsiella sp. OBRC7]
gi|423103977|ref|ZP_17091679.1| hypothetical protein HMPREF9686_02583 [Klebsiella oxytoca 10-5242]
gi|376385619|gb|EHS98340.1| hypothetical protein HMPREF9686_02583 [Klebsiella oxytoca 10-5242]
gi|402275800|gb|EJU24936.1| HTH domain protein [Klebsiella sp. OBRC7]
Length = 363
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ +L +A
Sbjct: 153 IANPREETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVVLVDCNLTEQSLEWVFTLAN- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L GE + DR++
Sbjct: 211 -GIPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGEPIENEADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
A+ L E+G + VV+ D V CS+ R+ L
Sbjct: 261 -------ALAWLHERGTQRVVICSEDDAV-FCSEAGGERFRMSL 296
>gi|157161647|ref|YP_001458965.1| hypothetical protein EcHS_A2303 [Escherichia coli HS]
gi|170019518|ref|YP_001724472.1| hypothetical protein EcolC_1482 [Escherichia coli ATCC 8739]
gi|188492841|ref|ZP_03000111.1| kinase, pfkB family protein [Escherichia coli 53638]
gi|194436100|ref|ZP_03068202.1| kinase, pfkB family protein [Escherichia coli 101-1]
gi|251785533|ref|YP_002999837.1| pseudouridine kinase [Escherichia coli BL21(DE3)]
gi|253772908|ref|YP_003035739.1| hypothetical protein ECBD_1492 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162180|ref|YP_003045288.1| hypothetical protein ECB_02095 [Escherichia coli B str. REL606]
gi|254288941|ref|YP_003054689.1| kinase [Escherichia coli BL21(DE3)]
gi|297516081|ref|ZP_06934467.1| hypothetical protein EcolOP_00465 [Escherichia coli OP50]
gi|300930399|ref|ZP_07145808.1| kinase, PfkB family [Escherichia coli MS 187-1]
gi|312973585|ref|ZP_07787757.1| uncharacterized sugar kinase yeiC [Escherichia coli 1827-70]
gi|422790580|ref|ZP_16843284.1| pfkB family protein carbohydrate kinase [Escherichia coli TA007]
gi|432370341|ref|ZP_19613428.1| pseudouridine kinase [Escherichia coli KTE10]
gi|432485973|ref|ZP_19727889.1| pseudouridine kinase [Escherichia coli KTE212]
gi|432671239|ref|ZP_19906769.1| pseudouridine kinase [Escherichia coli KTE119]
gi|433174088|ref|ZP_20358614.1| pseudouridine kinase [Escherichia coli KTE232]
gi|442600283|ref|ZP_21017969.1| Pseudouridine kinase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|157067327|gb|ABV06582.1| kinase, pfkB family protein [Escherichia coli HS]
gi|169754446|gb|ACA77145.1| PfkB domain protein [Escherichia coli ATCC 8739]
gi|188488040|gb|EDU63143.1| kinase, pfkB family protein [Escherichia coli 53638]
gi|194424828|gb|EDX40813.1| kinase, pfkB family protein [Escherichia coli 101-1]
gi|242377806|emb|CAQ32571.1| predicted pseudouridine kinase [Escherichia coli BL21(DE3)]
gi|253323952|gb|ACT28554.1| PfkB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974081|gb|ACT39752.1| predicted kinase [Escherichia coli B str. REL606]
gi|253978248|gb|ACT43918.1| predicted kinase [Escherichia coli BL21(DE3)]
gi|300461721|gb|EFK25214.1| kinase, PfkB family [Escherichia coli MS 187-1]
gi|310332180|gb|EFP99415.1| uncharacterized sugar kinase yeiC [Escherichia coli 1827-70]
gi|323972952|gb|EGB68149.1| pfkB family protein carbohydrate kinase [Escherichia coli TA007]
gi|430885007|gb|ELC07937.1| pseudouridine kinase [Escherichia coli KTE10]
gi|431016370|gb|ELD29917.1| pseudouridine kinase [Escherichia coli KTE212]
gi|431210554|gb|ELF08609.1| pseudouridine kinase [Escherichia coli KTE119]
gi|431692176|gb|ELJ57615.1| pseudouridine kinase [Escherichia coli KTE232]
gi|441650845|emb|CCQ04224.1| Pseudouridine kinase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|422972147|ref|ZP_16975199.1| pseudouridine kinase [Escherichia coli TA124]
gi|371598028|gb|EHN86843.1| pseudouridine kinase [Escherichia coli TA124]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A+V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRANVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKV--- 208
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S F + G+ +VL++G DGV
Sbjct: 209 ----ASWFH----------QHGLNRLVLSMGGDGV 229
>gi|193071069|ref|ZP_03051995.1| kinase, pfkB family protein [Escherichia coli E110019]
gi|218695780|ref|YP_002403447.1| hypothetical protein EC55989_2419 [Escherichia coli 55989]
gi|293446516|ref|ZP_06662938.1| hypothetical protein ECCG_00664 [Escherichia coli B088]
gi|300822616|ref|ZP_07102754.1| kinase, PfkB family [Escherichia coli MS 119-7]
gi|300902183|ref|ZP_07120183.1| kinase, PfkB family [Escherichia coli MS 84-1]
gi|301306178|ref|ZP_07212253.1| kinase, PfkB family [Escherichia coli MS 124-1]
gi|331668866|ref|ZP_08369714.1| putative kinase [Escherichia coli TA271]
gi|331678115|ref|ZP_08378790.1| putative kinase [Escherichia coli H591]
gi|407470058|ref|YP_006783499.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481279|ref|YP_006778428.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481826|ref|YP_006769372.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415829138|ref|ZP_11515521.1| hypothetical protein ECOK1357_2482 [Escherichia coli OK1357]
gi|415863753|ref|ZP_11536957.1| kinase, PfkB family [Escherichia coli MS 85-1]
gi|416343729|ref|ZP_11677629.1| Pseudouridine kinase [Escherichia coli EC4100B]
gi|417146439|ref|ZP_11987397.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2264]
gi|417222194|ref|ZP_12025634.1| carbohydrate kinase, PfkB family [Escherichia coli 96.154]
gi|417232117|ref|ZP_12033515.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0959]
gi|417237790|ref|ZP_12035521.1| carbohydrate kinase, PfkB family [Escherichia coli 9.0111]
gi|417268941|ref|ZP_12056301.1| carbohydrate kinase, PfkB family [Escherichia coli 3.3884]
gi|417597482|ref|ZP_12248124.1| hypothetical protein EC30301_2620 [Escherichia coli 3030-1]
gi|417602759|ref|ZP_12253329.1| hypothetical protein ECSTEC94C_2556 [Escherichia coli STEC_94C]
gi|417639900|ref|ZP_12290042.1| hypothetical protein ECTX1999_2607 [Escherichia coli TX1999]
gi|417667586|ref|ZP_12317131.1| hypothetical protein ECSTECO31_2395 [Escherichia coli STEC_O31]
gi|417713194|ref|ZP_12362161.1| hypothetical protein SFK272_2928 [Shigella flexneri K-272]
gi|417718032|ref|ZP_12366933.1| hypothetical protein SFK227_2766 [Shigella flexneri K-227]
gi|417805732|ref|ZP_12452681.1| pseudouridine kinase [Escherichia coli O104:H4 str. LB226692]
gi|417833474|ref|ZP_12479922.1| pseudouridine kinase [Escherichia coli O104:H4 str. 01-09591]
gi|417863507|ref|ZP_12508555.1| hypothetical protein C22711_0440 [Escherichia coli O104:H4 str.
C227-11]
gi|418945392|ref|ZP_13498243.1| pseudouridine kinase [Escherichia coli O157:H43 str. T22]
gi|419170823|ref|ZP_13714709.1| pseudouridine kinase [Escherichia coli DEC7A]
gi|419181462|ref|ZP_13725076.1| pseudouridine kinase [Escherichia coli DEC7C]
gi|419186908|ref|ZP_13730422.1| pseudouridine kinase [Escherichia coli DEC7D]
gi|419192198|ref|ZP_13735652.1| pseudouridine kinase [Escherichia coli DEC7E]
gi|419278645|ref|ZP_13820892.1| pseudouridine kinase [Escherichia coli DEC10E]
gi|419345831|ref|ZP_13887206.1| pseudouridine kinase [Escherichia coli DEC13A]
gi|419350244|ref|ZP_13891582.1| pseudouridine kinase [Escherichia coli DEC13B]
gi|419355659|ref|ZP_13896917.1| pseudouridine kinase [Escherichia coli DEC13C]
gi|419360749|ref|ZP_13901967.1| pseudouridine kinase [Escherichia coli DEC13D]
gi|419365677|ref|ZP_13906839.1| pseudouridine kinase [Escherichia coli DEC13E]
gi|419376073|ref|ZP_13917098.1| pseudouridine kinase [Escherichia coli DEC14B]
gi|419381410|ref|ZP_13922361.1| pseudouridine kinase [Escherichia coli DEC14C]
gi|419386717|ref|ZP_13927595.1| pseudouridine kinase [Escherichia coli DEC14D]
gi|419803786|ref|ZP_14328953.1| kinase, PfkB family [Escherichia coli AI27]
gi|419862619|ref|ZP_14385213.1| pseudouridine kinase [Escherichia coli O103:H25 str. CVM9340]
gi|420321041|ref|ZP_14822871.1| pseudouridine kinase [Shigella flexneri 2850-71]
gi|420386213|ref|ZP_14885564.1| pseudouridine kinase [Escherichia coli EPECa12]
gi|422777459|ref|ZP_16831111.1| pfkB family protein carbohydrate kinase [Escherichia coli H120]
gi|422988292|ref|ZP_16979065.1| pseudouridine kinase [Escherichia coli O104:H4 str. C227-11]
gi|422995183|ref|ZP_16985947.1| pseudouridine kinase [Escherichia coli O104:H4 str. C236-11]
gi|423000258|ref|ZP_16991012.1| pseudouridine kinase [Escherichia coli O104:H4 str. 09-7901]
gi|423003927|ref|ZP_16994673.1| pseudouridine kinase [Escherichia coli O104:H4 str. 04-8351]
gi|423010500|ref|ZP_17001234.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-3677]
gi|423019727|ref|ZP_17010436.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4404]
gi|423024894|ref|ZP_17015591.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4522]
gi|423030715|ref|ZP_17021403.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4623]
gi|423038541|ref|ZP_17029215.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423043660|ref|ZP_17034327.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045389|ref|ZP_17036049.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423053928|ref|ZP_17042735.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423060903|ref|ZP_17049699.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423706213|ref|ZP_17680596.1| pseudouridine kinase [Escherichia coli B799]
gi|425289173|ref|ZP_18680021.1| pseudouridine kinase [Escherichia coli 3006]
gi|425305893|ref|ZP_18695604.1| pseudouridine kinase [Escherichia coli N1]
gi|427805279|ref|ZP_18972346.1| putative kinase [Escherichia coli chi7122]
gi|427809838|ref|ZP_18976903.1| putative kinase [Escherichia coli]
gi|429719772|ref|ZP_19254703.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771654|ref|ZP_19303677.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02030]
gi|429781586|ref|ZP_19313515.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785326|ref|ZP_19317224.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02092]
gi|429791215|ref|ZP_19323072.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02093]
gi|429797042|ref|ZP_19328850.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02281]
gi|429798640|ref|ZP_19330441.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02318]
gi|429807153|ref|ZP_19338880.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02913]
gi|429812053|ref|ZP_19343739.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-03439]
gi|429817573|ref|ZP_19349214.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-04080]
gi|429822784|ref|ZP_19354382.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-03943]
gi|429904164|ref|ZP_19370143.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908301|ref|ZP_19374265.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914172|ref|ZP_19380120.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919203|ref|ZP_19385135.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925022|ref|ZP_19390936.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429928959|ref|ZP_19394861.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935498|ref|ZP_19401384.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941178|ref|ZP_19407052.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429943858|ref|ZP_19409721.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951458|ref|ZP_19417304.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429954770|ref|ZP_19420602.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432526943|ref|ZP_19764037.1| pseudouridine kinase [Escherichia coli KTE233]
gi|432750652|ref|ZP_19985256.1| pseudouridine kinase [Escherichia coli KTE29]
gi|432765563|ref|ZP_20000001.1| pseudouridine kinase [Escherichia coli KTE48]
gi|432809821|ref|ZP_20043714.1| pseudouridine kinase [Escherichia coli KTE101]
gi|432835156|ref|ZP_20068695.1| pseudouridine kinase [Escherichia coli KTE136]
gi|433092558|ref|ZP_20278825.1| pseudouridine kinase [Escherichia coli KTE138]
gi|433130738|ref|ZP_20316174.1| pseudouridine kinase [Escherichia coli KTE163]
gi|433135400|ref|ZP_20320745.1| pseudouridine kinase [Escherichia coli KTE166]
gi|443618223|ref|YP_007382079.1| pseudouridine kinase [Escherichia coli APEC O78]
gi|192955592|gb|EDV86069.1| kinase, pfkB family protein [Escherichia coli E110019]
gi|218352512|emb|CAU98289.1| putative kinase [Escherichia coli 55989]
gi|291323346|gb|EFE62774.1| hypothetical protein ECCG_00664 [Escherichia coli B088]
gi|300405702|gb|EFJ89240.1| kinase, PfkB family [Escherichia coli MS 84-1]
gi|300524816|gb|EFK45885.1| kinase, PfkB family [Escherichia coli MS 119-7]
gi|300838544|gb|EFK66304.1| kinase, PfkB family [Escherichia coli MS 124-1]
gi|315255320|gb|EFU35288.1| kinase, PfkB family [Escherichia coli MS 85-1]
gi|320199761|gb|EFW74350.1| Pseudouridine kinase [Escherichia coli EC4100B]
gi|323184211|gb|EFZ69588.1| hypothetical protein ECOK1357_2482 [Escherichia coli OK1357]
gi|323944982|gb|EGB41047.1| pfkB family protein carbohydrate kinase [Escherichia coli H120]
gi|331064060|gb|EGI35971.1| putative kinase [Escherichia coli TA271]
gi|331074575|gb|EGI45895.1| putative kinase [Escherichia coli H591]
gi|333002885|gb|EGK22441.1| hypothetical protein SFK272_2928 [Shigella flexneri K-272]
gi|333016887|gb|EGK36211.1| hypothetical protein SFK227_2766 [Shigella flexneri K-227]
gi|340734356|gb|EGR63486.1| pseudouridine kinase [Escherichia coli O104:H4 str. 01-09591]
gi|340739644|gb|EGR73876.1| pseudouridine kinase [Escherichia coli O104:H4 str. LB226692]
gi|341916796|gb|EGT66413.1| hypothetical protein C22711_0440 [Escherichia coli O104:H4 str.
C227-11]
gi|345350425|gb|EGW82700.1| hypothetical protein ECSTEC94C_2556 [Escherichia coli STEC_94C]
gi|345353767|gb|EGW85996.1| hypothetical protein EC30301_2620 [Escherichia coli 3030-1]
gi|345393280|gb|EGX23057.1| hypothetical protein ECTX1999_2607 [Escherichia coli TX1999]
gi|354862018|gb|EHF22456.1| pseudouridine kinase [Escherichia coli O104:H4 str. C236-11]
gi|354867303|gb|EHF27725.1| pseudouridine kinase [Escherichia coli O104:H4 str. C227-11]
gi|354869374|gb|EHF29784.1| pseudouridine kinase [Escherichia coli O104:H4 str. 04-8351]
gi|354873229|gb|EHF33606.1| pseudouridine kinase [Escherichia coli O104:H4 str. 09-7901]
gi|354879983|gb|EHF40319.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-3677]
gi|354889407|gb|EHF49656.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4404]
gi|354893002|gb|EHF53206.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4522]
gi|354895139|gb|EHF55328.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897413|gb|EHF57571.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4623]
gi|354898774|gb|EHF58925.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912825|gb|EHF72823.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915830|gb|EHF75806.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917745|gb|EHF77707.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|375319292|gb|EHS65488.1| pseudouridine kinase [Escherichia coli O157:H43 str. T22]
gi|378014867|gb|EHV77764.1| pseudouridine kinase [Escherichia coli DEC7A]
gi|378023710|gb|EHV86382.1| pseudouridine kinase [Escherichia coli DEC7C]
gi|378028900|gb|EHV91516.1| pseudouridine kinase [Escherichia coli DEC7D]
gi|378038727|gb|EHW01236.1| pseudouridine kinase [Escherichia coli DEC7E]
gi|378128070|gb|EHW89455.1| pseudouridine kinase [Escherichia coli DEC10E]
gi|378186944|gb|EHX47565.1| pseudouridine kinase [Escherichia coli DEC13A]
gi|378200422|gb|EHX60877.1| pseudouridine kinase [Escherichia coli DEC13B]
gi|378200989|gb|EHX61442.1| pseudouridine kinase [Escherichia coli DEC13C]
gi|378203190|gb|EHX63614.1| pseudouridine kinase [Escherichia coli DEC13D]
gi|378212912|gb|EHX73231.1| pseudouridine kinase [Escherichia coli DEC13E]
gi|378220160|gb|EHX80426.1| pseudouridine kinase [Escherichia coli DEC14B]
gi|378227777|gb|EHX87945.1| pseudouridine kinase [Escherichia coli DEC14C]
gi|378231244|gb|EHX91355.1| pseudouridine kinase [Escherichia coli DEC14D]
gi|384473185|gb|EIE57229.1| kinase, PfkB family [Escherichia coli AI27]
gi|385712097|gb|EIG49052.1| pseudouridine kinase [Escherichia coli B799]
gi|386163891|gb|EIH25686.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2264]
gi|386201996|gb|EII00987.1| carbohydrate kinase, PfkB family [Escherichia coli 96.154]
gi|386205116|gb|EII09627.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0959]
gi|386213568|gb|EII23993.1| carbohydrate kinase, PfkB family [Escherichia coli 9.0111]
gi|386227746|gb|EII55102.1| carbohydrate kinase, PfkB family [Escherichia coli 3.3884]
gi|388344759|gb|EIL10583.1| pseudouridine kinase [Escherichia coli O103:H25 str. CVM9340]
gi|391248334|gb|EIQ07576.1| pseudouridine kinase [Shigella flexneri 2850-71]
gi|391305280|gb|EIQ63071.1| pseudouridine kinase [Escherichia coli EPECa12]
gi|397784732|gb|EJK95585.1| hypothetical protein ECSTECO31_2395 [Escherichia coli STEC_O31]
gi|406776988|gb|AFS56412.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053576|gb|AFS73627.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066093|gb|AFS87140.1| pseudouridine kinase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408213725|gb|EKI38204.1| pseudouridine kinase [Escherichia coli 3006]
gi|408228518|gb|EKI52052.1| pseudouridine kinase [Escherichia coli N1]
gi|412963461|emb|CCK47386.1| putative kinase [Escherichia coli chi7122]
gi|412970017|emb|CCJ44660.1| putative kinase [Escherichia coli]
gi|429346163|gb|EKY82944.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429348915|gb|EKY85671.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02092]
gi|429361137|gb|EKY97794.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02030]
gi|429362568|gb|EKY99215.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02093]
gi|429362839|gb|EKY99484.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02281]
gi|429365957|gb|EKZ02569.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02318]
gi|429376812|gb|EKZ13340.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-02913]
gi|429379286|gb|EKZ15787.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-03439]
gi|429380854|gb|EKZ17343.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-03943]
gi|429393075|gb|EKZ29474.1| pseudouridine kinase [Escherichia coli O104:H4 str. 11-04080]
gi|429405176|gb|EKZ41442.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406942|gb|EKZ43196.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410690|gb|EKZ46911.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414402|gb|EKZ50577.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421011|gb|EKZ57133.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429429345|gb|EKZ65414.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432032|gb|EKZ68072.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436238|gb|EKZ72254.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438443|gb|EKZ74436.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448065|gb|EKZ83982.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451783|gb|EKZ87671.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429457727|gb|EKZ93565.1| pseudouridine kinase [Escherichia coli O104:H4 str. Ec12-0466]
gi|431063601|gb|ELD72840.1| pseudouridine kinase [Escherichia coli KTE233]
gi|431296634|gb|ELF86345.1| pseudouridine kinase [Escherichia coli KTE29]
gi|431309738|gb|ELF97931.1| pseudouridine kinase [Escherichia coli KTE48]
gi|431362589|gb|ELG49167.1| pseudouridine kinase [Escherichia coli KTE101]
gi|431385516|gb|ELG69503.1| pseudouridine kinase [Escherichia coli KTE136]
gi|431609888|gb|ELI79193.1| pseudouridine kinase [Escherichia coli KTE138]
gi|431645971|gb|ELJ13511.1| pseudouridine kinase [Escherichia coli KTE163]
gi|431656387|gb|ELJ23373.1| pseudouridine kinase [Escherichia coli KTE166]
gi|443422731|gb|AGC87635.1| pseudouridine kinase [Escherichia coli APEC O78]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|417828552|ref|ZP_12475105.1| pseudouridine kinase [Shigella flexneri J1713]
gi|335574928|gb|EGM61240.1| pseudouridine kinase [Shigella flexneri J1713]
Length = 314
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 36 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 95
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 96 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 154
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 155 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 212
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 213 FH-----------------QHGLNRLVLSMGGDGV 230
>gi|422762368|ref|ZP_16816125.1| pfkB family protein carbohydrate kinase [Escherichia coli E1167]
gi|324117994|gb|EGC11893.1| pfkB family protein carbohydrate kinase [Escherichia coli E1167]
Length = 313
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|407796701|ref|ZP_11143653.1| hypothetical protein MJ3_07338 [Salimicrobium sp. MJ3]
gi|407018855|gb|EKE31575.1| hypothetical protein MJ3_07338 [Salimicrobium sp. MJ3]
Length = 361
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVARNVAE + KL +I+ G D G L++ K G+ T +
Sbjct: 91 LGGVARNVAENLGKLTCDVSLIALTGEDQDGEWLMKQTKQQGVDVSQSFALNGEKTGAYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD +GEL AVA +E ++F T + HI+S+ V+ D NL L+ + A
Sbjct: 151 SILDSSGELVLAVADMELYDRF-TAGLLEAKWPHIASSEVIFADTNLPEATLSYLIQRAD 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + +W VS TK +R+ + + V+ N +E + G
Sbjct: 210 KEDRHLWIHTVSTTKMKRLPEDLSGVGVLFINREEAAELTGVHGGTK------------- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
+ + A +++ +G+ VV+ L +DGV +
Sbjct: 257 ---EKWREACELMIRRGVSKVVIHLDTDGVFV 285
>gi|429766287|ref|ZP_19298558.1| kinase, PfkB family [Clostridium celatum DSM 1785]
gi|429184981|gb|EKY25977.1| kinase, PfkB family [Clostridium celatum DSM 1785]
Length = 315
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 8/217 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE ++++G K IS LG D G + EH K G + E K T
Sbjct: 40 FGGVCRNIAENLARVGVKTEFISTLGDDENGKSIFEHSKKMGYNMENSLILKGESTPTYM 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ GE+ +AV +ES+ K + +I +A +VD++ +P L K
Sbjct: 100 AILNHQGEMESAVVDMESLNK-MDQSFIDAKDEIFRNAEYTIVDSD-NPELLEYILKKYG 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+PVS K+R+I +VKY + PN E+ AL G + D K
Sbjct: 158 -GKSKFILDPVSAKKARKIRHLVKYFHTIKPNRFEV----EALCGFKIENDDDLRKAGKF 212
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+ Q +K + L GI V T G +G L C +++
Sbjct: 213 FIDQGVKNVFISLDADGIYYVTST-GEEGKLACGEKI 248
>gi|299144520|ref|ZP_07037599.1| kinase, PfkB family [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517608|gb|EFI41348.1| kinase, PfkB family [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 364
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +S+L + +IS +G D G +L S G+ ++ I D +T+V
Sbjct: 96 GGVGRNIAENISRLNVRTSIISVIGDDDKGRFILNELNSLGIESDSIFVMHDCNTSVYLA 155
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
ILD N ++ A+ +E I K LTP+ I + I +A +VD NL+ L K
Sbjct: 156 ILDENRDMDIAINDMEIINK-LTPELIEKKQRMIENAICCIVDTNLTRETLEFLFK---N 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N + + VSV K+ ++ ++ + + N+ E A LS K +S
Sbjct: 212 INQKYFVDCVSVNKAEKLEGLLNNVYFLKANKYE----AEFLS-----------KVKIDS 256
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L + K + ++E+G+ VV+T+G +G L ++
Sbjct: 257 L-EDAKKSAKKIIEQGVNSVVITMGDEGSLYADEK 290
>gi|387607850|ref|YP_006096706.1| putative pyrimidine kinase [Escherichia coli 042]
gi|432862761|ref|ZP_20087050.1| pseudouridine kinase [Escherichia coli KTE146]
gi|284922150|emb|CBG35232.1| putative pyrimidine kinase [Escherichia coli 042]
gi|431404800|gb|ELG88046.1| pseudouridine kinase [Escherichia coli KTE146]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQKAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|310659288|ref|YP_003937009.1| putative kinase [[Clostridium] sticklandii]
gi|308826066|emb|CBH22104.1| putative kinase [[Clostridium] sticklandii]
Length = 372
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN++E ++KL +ISA+G D G L++ + G+ + T++
Sbjct: 96 LGGVGRNISENLAKLDIPVRLISAVGNDFYGQKLIKESEDMGIDMKSSLISDSYPTSMYL 155
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+I+D ++ A++ +E I + + +I++ + +A+++++D N+ P
Sbjct: 156 SIMDEQNDMRVAISQME-IYELIDETFIQENQLLLKNANIIVLDTNI--PKKTIDYIGMN 212
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+IP++ +PVS K+ R+ +KYI + PN E+ + P D
Sbjct: 213 FSDIPIFVDPVSSKKAMRLKDSLKYIHTIKPNRHEVSDLLGI--------PADT------ 258
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LEKG++ V +++GS+GV C ++
Sbjct: 259 --IDDIRKAGEKFLEKGLKQVFISMGSEGVFACDEK 292
>gi|420240444|ref|ZP_14744669.1| sugar kinase, ribokinase [Rhizobium sp. CF080]
gi|398076286|gb|EJL67354.1| sugar kinase, ribokinase [Rhizobium sp. CF080]
Length = 369
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 121/297 (40%), Gaps = 62/297 (20%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVARNVAE ++ LG+ +S +G D G +L+H + G+ I + TA +
Sbjct: 95 LGGVARNVAENLALLGTTTSFVSIVGDDEGGRAVLKHMRDRGIDVSQIITTTERPTAEYA 154
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD G+L +A + SI L P+ I + H+++AS + D NL LAA
Sbjct: 155 AILDTKGDLVLGIADM-SIFDLLLPNHIERIWPHLAAASWVFSDCNLPAETLAALIAKRQ 213
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + VS K+ R+ + + ++ N DE ANA+ G ID K +A
Sbjct: 214 GARFRLAIDAVSTPKAARLPRDLTGVDLLFMNIDE----ANAVLGRKAHETIDDAKEAAL 269
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+L R V+T+G G+ + E G R
Sbjct: 270 ALQAAGA-----------REAVVTMGPRGIAVAGTE-------GART------------- 298
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
FPA+ A + +TGAGD ++ GTL I G D
Sbjct: 299 --------------------------FPAVHARPIDITGAGDAMIAGTLHRILHGED 329
>gi|375261938|ref|YP_005021108.1| putative kinase [Klebsiella oxytoca KCTC 1686]
gi|365911416|gb|AEX06869.1| putative kinase [Klebsiella oxytoca KCTC 1686]
Length = 363
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ +L +A
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVILVDCNLTEQSLEWVFTLAN- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L G+ + DR++
Sbjct: 211 -GIPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGQAIENDADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
A+ L E+G + VV+ D V CS+ R+ L
Sbjct: 261 -------ALAWLHERGTQRVVICSEDDAV-FCSEAGGERFRMSL 296
>gi|432869535|ref|ZP_20090128.1| pseudouridine kinase [Escherichia coli KTE147]
gi|431410121|gb|ELG93283.1| pseudouridine kinase [Escherichia coli KTE147]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHCEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +V+++G DGV
Sbjct: 212 FH-----------------QHGLNRLVMSMGGDGV 229
>gi|432815905|ref|ZP_20049689.1| pseudouridine kinase [Escherichia coli KTE115]
gi|431364129|gb|ELG50673.1| pseudouridine kinase [Escherichia coli KTE115]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++VD N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVVDCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKV--- 208
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S F + G+ +VL++G +GV
Sbjct: 209 ----ASWFH----------QHGLNRLVLSMGGNGV 229
>gi|157156425|ref|YP_001463518.1| hypothetical protein EcE24377A_2463 [Escherichia coli E24377A]
gi|218554734|ref|YP_002387647.1| hypothetical protein ECIAI1_2246 [Escherichia coli IAI1]
gi|218700637|ref|YP_002408266.1| hypothetical protein ECIAI39_2306 [Escherichia coli IAI39]
gi|293410527|ref|ZP_06654103.1| sugar kinase [Escherichia coli B354]
gi|293415449|ref|ZP_06658092.1| sugar kinase [Escherichia coli B185]
gi|300926271|ref|ZP_07142074.1| kinase, PfkB family [Escherichia coli MS 182-1]
gi|301328648|ref|ZP_07221709.1| kinase, PfkB family [Escherichia coli MS 78-1]
gi|307311255|ref|ZP_07590899.1| PfkB domain protein [Escherichia coli W]
gi|378712383|ref|YP_005277276.1| PfkB domain-containing protein [Escherichia coli KO11FL]
gi|386609558|ref|YP_006125044.1| pseudouridine kinase [Escherichia coli W]
gi|386614776|ref|YP_006134442.1| sugar kinase YeiC [Escherichia coli UMNK88]
gi|386624861|ref|YP_006144589.1| pseudouridine kinase [Escherichia coli O7:K1 str. CE10]
gi|386700848|ref|YP_006164685.1| pseudouridine kinase [Escherichia coli KO11FL]
gi|386710040|ref|YP_006173761.1| pseudouridine kinase [Escherichia coli W]
gi|417132059|ref|ZP_11976844.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0588]
gi|417155119|ref|ZP_11993248.1| carbohydrate kinase, PfkB family [Escherichia coli 96.0497]
gi|417581677|ref|ZP_12232479.1| hypothetical protein ECSTECB2F1_2341 [Escherichia coli STEC_B2F1]
gi|417629410|ref|ZP_12279648.1| hypothetical protein ECSTECMHI813_2332 [Escherichia coli
STEC_MHI813]
gi|419175833|ref|ZP_13719671.1| pseudouridine kinase [Escherichia coli DEC7B]
gi|419392260|ref|ZP_13933072.1| pseudouridine kinase [Escherichia coli DEC15A]
gi|419397300|ref|ZP_13938068.1| pseudouridine kinase [Escherichia coli DEC15B]
gi|419402642|ref|ZP_13943366.1| pseudouridine kinase [Escherichia coli DEC15C]
gi|419407761|ref|ZP_13948450.1| pseudouridine kinase [Escherichia coli DEC15D]
gi|419413346|ref|ZP_13953998.1| pseudouridine kinase [Escherichia coli DEC15E]
gi|419950472|ref|ZP_14466685.1| hypothetical protein ECMT8_13922 [Escherichia coli CUMT8]
gi|421775793|ref|ZP_16212401.1| PfkB domain protein [Escherichia coli AD30]
gi|422956460|ref|ZP_16968934.1| pseudouridine kinase [Escherichia coli H494]
gi|432602727|ref|ZP_19838971.1| pseudouridine kinase [Escherichia coli KTE66]
gi|432793381|ref|ZP_20027465.1| pseudouridine kinase [Escherichia coli KTE78]
gi|432799339|ref|ZP_20033361.1| pseudouridine kinase [Escherichia coli KTE79]
gi|432875693|ref|ZP_20093966.1| pseudouridine kinase [Escherichia coli KTE154]
gi|432948047|ref|ZP_20143203.1| pseudouridine kinase [Escherichia coli KTE196]
gi|432968276|ref|ZP_20157191.1| pseudouridine kinase [Escherichia coli KTE203]
gi|433043749|ref|ZP_20231245.1| pseudouridine kinase [Escherichia coli KTE117]
gi|450218515|ref|ZP_21895889.1| pseudouridine kinase [Escherichia coli O08]
gi|157078455|gb|ABV18163.1| kinase, pfkB family protein [Escherichia coli E24377A]
gi|218361502|emb|CAQ99091.1| putative kinase [Escherichia coli IAI1]
gi|218370623|emb|CAR18432.1| putative kinase [Escherichia coli IAI39]
gi|291433097|gb|EFF06076.1| sugar kinase [Escherichia coli B185]
gi|291470995|gb|EFF13479.1| sugar kinase [Escherichia coli B354]
gi|300417700|gb|EFK01011.1| kinase, PfkB family [Escherichia coli MS 182-1]
gi|300845040|gb|EFK72800.1| kinase, PfkB family [Escherichia coli MS 78-1]
gi|306908761|gb|EFN39258.1| PfkB domain protein [Escherichia coli W]
gi|315061475|gb|ADT75802.1| pseudouridine kinase [Escherichia coli W]
gi|323377944|gb|ADX50212.1| PfkB domain protein [Escherichia coli KO11FL]
gi|332343945|gb|AEE57279.1| sugar kinase YeiC [Escherichia coli UMNK88]
gi|345337448|gb|EGW69880.1| hypothetical protein ECSTECB2F1_2341 [Escherichia coli STEC_B2F1]
gi|345373378|gb|EGX05339.1| hypothetical protein ECSTECMHI813_2332 [Escherichia coli
STEC_MHI813]
gi|349738598|gb|AEQ13304.1| pseudouridine kinase [Escherichia coli O7:K1 str. CE10]
gi|371599995|gb|EHN88773.1| pseudouridine kinase [Escherichia coli H494]
gi|378033236|gb|EHV95816.1| pseudouridine kinase [Escherichia coli DEC7B]
gi|378237460|gb|EHX97483.1| pseudouridine kinase [Escherichia coli DEC15A]
gi|378243421|gb|EHY03367.1| pseudouridine kinase [Escherichia coli DEC15B]
gi|378247176|gb|EHY07095.1| pseudouridine kinase [Escherichia coli DEC15C]
gi|378254140|gb|EHY14004.1| pseudouridine kinase [Escherichia coli DEC15D]
gi|378258778|gb|EHY18594.1| pseudouridine kinase [Escherichia coli DEC15E]
gi|383392375|gb|AFH17333.1| pseudouridine kinase [Escherichia coli KO11FL]
gi|383405732|gb|AFH11975.1| pseudouridine kinase [Escherichia coli W]
gi|386149913|gb|EIH01202.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0588]
gi|386168208|gb|EIH34724.1| carbohydrate kinase, PfkB family [Escherichia coli 96.0497]
gi|388416796|gb|EIL76672.1| hypothetical protein ECMT8_13922 [Escherichia coli CUMT8]
gi|408459262|gb|EKJ83045.1| PfkB domain protein [Escherichia coli AD30]
gi|431141301|gb|ELE43066.1| pseudouridine kinase [Escherichia coli KTE66]
gi|431339044|gb|ELG26106.1| pseudouridine kinase [Escherichia coli KTE78]
gi|431343205|gb|ELG30169.1| pseudouridine kinase [Escherichia coli KTE79]
gi|431420639|gb|ELH02923.1| pseudouridine kinase [Escherichia coli KTE154]
gi|431458025|gb|ELH38362.1| pseudouridine kinase [Escherichia coli KTE196]
gi|431471393|gb|ELH51286.1| pseudouridine kinase [Escherichia coli KTE203]
gi|431556070|gb|ELI29905.1| pseudouridine kinase [Escherichia coli KTE117]
gi|449317575|gb|EMD07660.1| pseudouridine kinase [Escherichia coli O08]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|193062352|ref|ZP_03043447.1| kinase, pfkB family protein [Escherichia coli E22]
gi|194427203|ref|ZP_03059754.1| kinase, pfkB family protein [Escherichia coli B171]
gi|209919625|ref|YP_002293709.1| hypothetical protein ECSE_2434 [Escherichia coli SE11]
gi|260844772|ref|YP_003222550.1| kinase [Escherichia coli O103:H2 str. 12009]
gi|260856139|ref|YP_003230030.1| hypothetical protein ECO26_3078 [Escherichia coli O26:H11 str.
11368]
gi|260868866|ref|YP_003235268.1| putative kinase [Escherichia coli O111:H- str. 11128]
gi|415793544|ref|ZP_11496161.1| hypothetical protein ECEPECA14_5813 [Escherichia coli EPECa14]
gi|415798330|ref|ZP_11498354.1| hypothetical protein ECE128010_2040 [Escherichia coli E128010]
gi|415822981|ref|ZP_11511500.1| hypothetical protein ECOK1180_4302 [Escherichia coli OK1180]
gi|417176012|ref|ZP_12005808.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2608]
gi|417182768|ref|ZP_12009325.1| carbohydrate kinase, PfkB family [Escherichia coli 93.0624]
gi|417191929|ref|ZP_12014029.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0522]
gi|417213638|ref|ZP_12022679.1| carbohydrate kinase, PfkB family [Escherichia coli JB1-95]
gi|417253909|ref|ZP_12045665.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0967]
gi|417592424|ref|ZP_12243121.1| hypothetical protein EC253486_3031 [Escherichia coli 2534-86]
gi|419197628|ref|ZP_13741016.1| pseudouridine kinase [Escherichia coli DEC8A]
gi|419204105|ref|ZP_13747288.1| pseudouridine kinase [Escherichia coli DEC8B]
gi|419210319|ref|ZP_13753399.1| pseudouridine kinase [Escherichia coli DEC8C]
gi|419216214|ref|ZP_13759216.1| pseudouridine kinase [Escherichia coli DEC8D]
gi|419222154|ref|ZP_13765077.1| pseudouridine kinase [Escherichia coli DEC8E]
gi|419227353|ref|ZP_13770211.1| pseudouridine kinase [Escherichia coli DEC9A]
gi|419232845|ref|ZP_13775622.1| pseudouridine kinase [Escherichia coli DEC9B]
gi|419238417|ref|ZP_13781138.1| pseudouridine kinase [Escherichia coli DEC9C]
gi|419243885|ref|ZP_13786524.1| pseudouridine kinase [Escherichia coli DEC9D]
gi|419249710|ref|ZP_13792294.1| pseudouridine kinase [Escherichia coli DEC9E]
gi|419255526|ref|ZP_13798045.1| pseudouridine kinase [Escherichia coli DEC10A]
gi|419261727|ref|ZP_13804149.1| pseudouridine kinase [Escherichia coli DEC10B]
gi|419267607|ref|ZP_13809962.1| pseudouridine kinase [Escherichia coli DEC10C]
gi|419273257|ref|ZP_13815556.1| pseudouridine kinase [Escherichia coli DEC10D]
gi|419284767|ref|ZP_13826943.1| pseudouridine kinase [Escherichia coli DEC10F]
gi|419290109|ref|ZP_13832201.1| pseudouridine kinase [Escherichia coli DEC11A]
gi|419295436|ref|ZP_13837482.1| pseudouridine kinase [Escherichia coli DEC11B]
gi|419300896|ref|ZP_13842895.1| pseudouridine kinase [Escherichia coli DEC11C]
gi|419307026|ref|ZP_13848926.1| pseudouridine kinase [Escherichia coli DEC11D]
gi|419312034|ref|ZP_13853896.1| pseudouridine kinase [Escherichia coli DEC11E]
gi|419317444|ref|ZP_13859247.1| pseudouridine kinase [Escherichia coli DEC12A]
gi|419323617|ref|ZP_13865310.1| pseudouridine kinase [Escherichia coli DEC12B]
gi|419329581|ref|ZP_13871185.1| pseudouridine kinase [Escherichia coli DEC12C]
gi|419335146|ref|ZP_13876679.1| pseudouridine kinase [Escherichia coli DEC12D]
gi|419340616|ref|ZP_13882080.1| pseudouridine kinase [Escherichia coli DEC12E]
gi|419870539|ref|ZP_14392632.1| pseudouridine kinase [Escherichia coli O103:H2 str. CVM9450]
gi|419875175|ref|ZP_14397055.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9534]
gi|419881888|ref|ZP_14403175.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9545]
gi|419886915|ref|ZP_14407533.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9570]
gi|419895759|ref|ZP_14415544.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9574]
gi|419902403|ref|ZP_14421629.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM9942]
gi|419906500|ref|ZP_14425401.1| putative kinase [Escherichia coli O26:H11 str. CVM10026]
gi|420089827|ref|ZP_14601607.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9602]
gi|420095688|ref|ZP_14607168.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9634]
gi|420102597|ref|ZP_14613577.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9455]
gi|420106383|ref|ZP_14616793.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9553]
gi|420117962|ref|ZP_14627306.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM10021]
gi|420121065|ref|ZP_14630208.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM10030]
gi|420133252|ref|ZP_14641510.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM9952]
gi|420391892|ref|ZP_14891145.1| pseudouridine kinase [Escherichia coli EPEC C342-62]
gi|422351311|ref|ZP_16432133.1| kinase, PfkB family [Escherichia coli MS 117-3]
gi|424761536|ref|ZP_18189108.1| pseudouridine kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424772609|ref|ZP_18199703.1| pseudouridine kinase [Escherichia coli O111:H8 str. CFSAN001632]
gi|432832197|ref|ZP_20065771.1| pseudouridine kinase [Escherichia coli KTE135]
gi|192932018|gb|EDV84617.1| kinase, pfkB family protein [Escherichia coli E22]
gi|194414824|gb|EDX31095.1| kinase, pfkB family protein [Escherichia coli B171]
gi|209912884|dbj|BAG77958.1| putative kinase [Escherichia coli SE11]
gi|257754788|dbj|BAI26290.1| predicted kinase [Escherichia coli O26:H11 str. 11368]
gi|257759919|dbj|BAI31416.1| predicted kinase [Escherichia coli O103:H2 str. 12009]
gi|257765222|dbj|BAI36717.1| predicted kinase [Escherichia coli O111:H- str. 11128]
gi|323152203|gb|EFZ38493.1| hypothetical protein ECEPECA14_5813 [Escherichia coli EPECa14]
gi|323161713|gb|EFZ47595.1| hypothetical protein ECE128010_2040 [Escherichia coli E128010]
gi|323176936|gb|EFZ62526.1| hypothetical protein ECOK1180_4302 [Escherichia coli OK1180]
gi|324020637|gb|EGB89856.1| kinase, PfkB family [Escherichia coli MS 117-3]
gi|345338761|gb|EGW71188.1| hypothetical protein EC253486_3031 [Escherichia coli 2534-86]
gi|378047160|gb|EHW09532.1| pseudouridine kinase [Escherichia coli DEC8A]
gi|378048825|gb|EHW11178.1| pseudouridine kinase [Escherichia coli DEC8B]
gi|378054109|gb|EHW16395.1| pseudouridine kinase [Escherichia coli DEC8C]
gi|378062698|gb|EHW24875.1| pseudouridine kinase [Escherichia coli DEC8D]
gi|378065476|gb|EHW27621.1| pseudouridine kinase [Escherichia coli DEC8E]
gi|378074866|gb|EHW36895.1| pseudouridine kinase [Escherichia coli DEC9A]
gi|378077372|gb|EHW39366.1| pseudouridine kinase [Escherichia coli DEC9B]
gi|378084317|gb|EHW46229.1| pseudouridine kinase [Escherichia coli DEC9C]
gi|378090963|gb|EHW52798.1| pseudouridine kinase [Escherichia coli DEC9D]
gi|378095295|gb|EHW57083.1| pseudouridine kinase [Escherichia coli DEC9E]
gi|378100512|gb|EHW62208.1| pseudouridine kinase [Escherichia coli DEC10A]
gi|378106776|gb|EHW68404.1| pseudouridine kinase [Escherichia coli DEC10B]
gi|378111435|gb|EHW73019.1| pseudouridine kinase [Escherichia coli DEC10C]
gi|378116714|gb|EHW78234.1| pseudouridine kinase [Escherichia coli DEC10D]
gi|378129910|gb|EHW91280.1| pseudouridine kinase [Escherichia coli DEC11A]
gi|378132021|gb|EHW93374.1| pseudouridine kinase [Escherichia coli DEC10F]
gi|378142523|gb|EHX03725.1| pseudouridine kinase [Escherichia coli DEC11B]
gi|378149013|gb|EHX10146.1| pseudouridine kinase [Escherichia coli DEC11D]
gi|378150512|gb|EHX11627.1| pseudouridine kinase [Escherichia coli DEC11C]
gi|378157662|gb|EHX18693.1| pseudouridine kinase [Escherichia coli DEC11E]
gi|378164693|gb|EHX25634.1| pseudouridine kinase [Escherichia coli DEC12B]
gi|378169027|gb|EHX29927.1| pseudouridine kinase [Escherichia coli DEC12A]
gi|378169897|gb|EHX30783.1| pseudouridine kinase [Escherichia coli DEC12C]
gi|378182225|gb|EHX42878.1| pseudouridine kinase [Escherichia coli DEC12D]
gi|378187527|gb|EHX48138.1| pseudouridine kinase [Escherichia coli DEC12E]
gi|386178704|gb|EIH56183.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2608]
gi|386184621|gb|EIH67360.1| carbohydrate kinase, PfkB family [Escherichia coli 93.0624]
gi|386190811|gb|EIH79557.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0522]
gi|386194334|gb|EIH88590.1| carbohydrate kinase, PfkB family [Escherichia coli JB1-95]
gi|386215836|gb|EII32328.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0967]
gi|388339340|gb|EIL05725.1| pseudouridine kinase [Escherichia coli O103:H2 str. CVM9450]
gi|388349544|gb|EIL15022.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9534]
gi|388360080|gb|EIL24327.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9574]
gi|388363702|gb|EIL27609.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9545]
gi|388364159|gb|EIL28028.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9570]
gi|388374131|gb|EIL37333.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM9942]
gi|388378986|gb|EIL41678.1| putative kinase [Escherichia coli O26:H11 str. CVM10026]
gi|391312573|gb|EIQ70181.1| pseudouridine kinase [Escherichia coli EPEC C342-62]
gi|394387037|gb|EJE64507.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9602]
gi|394391796|gb|EJE68625.1| pseudouridine kinase [Escherichia coli O111:H8 str. CVM9634]
gi|394401403|gb|EJE77216.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM10021]
gi|394410992|gb|EJE85306.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9455]
gi|394416196|gb|EJE90003.1| pseudouridine kinase [Escherichia coli O111:H11 str. CVM9553]
gi|394426395|gb|EJE99238.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM9952]
gi|394427299|gb|EJF00015.1| pseudouridine kinase [Escherichia coli O26:H11 str. CVM10030]
gi|421938160|gb|EKT95747.1| pseudouridine kinase [Escherichia coli O111:H8 str. CFSAN001632]
gi|421943556|gb|EKU00839.1| pseudouridine kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|431376167|gb|ELG61490.1| pseudouridine kinase [Escherichia coli KTE135]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRGDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|422830143|ref|ZP_16878304.1| pseudouridine kinase [Escherichia coli B093]
gi|371606833|gb|EHN95423.1| pseudouridine kinase [Escherichia coli B093]
Length = 313
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|170680599|ref|YP_001744360.1| hypothetical protein EcSMS35_2313 [Escherichia coli SMS-3-5]
gi|170518317|gb|ACB16495.1| kinase, pfkB family protein [Escherichia coli SMS-3-5]
Length = 313
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|388579781|gb|EIM20101.1| hypothetical protein WALSEDRAFT_61124 [Wallemia sebi CBS 633.66]
Length = 725
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 147/330 (44%), Gaps = 51/330 (15%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKD------I 58
LGGV RN+AE +++ K + S L + + E KSA T ++ + D
Sbjct: 389 LGGVGRNIAEATNRVLRKSPISSMLVTPVGSDEFAETLKSA---TSKLKMRTDGFINTYH 445
Query: 59 DTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
T VV+ +L+ +GEL V+S E++EK LT D +++ + ++ +D NL+ LA
Sbjct: 446 PTPVVNLLLNSDGELREGVSSFEAVEK-LTFDEVKKVLTK-HKPQLIALDGNLNSSLLAD 503
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMANALS-GENMFRP 175
A NI FEP SV K+ RI S + +T +PN EL A+ + GE R
Sbjct: 504 VMAYAEVNNIDTLFEPTSVAKATRILSGSGIPKLTYATPNIFELKALVESKQFGE--LRE 561
Query: 176 IDRNKHSAES--LFQTLK----------------PAILVLLEKGIRLVVLTLGSDGVLLC 217
ID + LFQ + P + V+L + +++ GSDGVL
Sbjct: 562 IDSYWETLNGLRLFQNFRDQLERNLPKNVLELGLPQMSVMLLPICKNLLVKCGSDGVLAV 621
Query: 218 SKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS 277
++ K +G +K + S +SR P G HF A A
Sbjct: 622 TR----------VKRDEFGD----WKDIKSDKEASRV--VHLPNDGDGVVVQHFKASVAE 665
Query: 278 -VVRLTGAGDCLVGGTLASISSGLDVMQSV 306
+V TGAGD VG +A+++S + SV
Sbjct: 666 RIVNTTGAGDSFVGALIAAVASRKGLTDSV 695
>gi|404375518|ref|ZP_10980702.1| pseudouridine kinase [Escherichia sp. 1_1_43]
gi|404291000|gb|EJZ47898.1| pseudouridine kinase [Escherichia sp. 1_1_43]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|416830509|ref|ZP_11898649.1| pseudouridine kinase [Escherichia coli O157:H7 str. LSU-61]
gi|320667961|gb|EFX34864.1| pseudouridine kinase [Escherichia coli O157:H7 str. LSU-61]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKTWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|416819583|ref|ZP_11893361.1| pseudouridine kinase [Escherichia coli O55:H7 str. USDA 5905]
gi|425249878|ref|ZP_18642829.1| pseudouridine kinase [Escherichia coli 5905]
gi|320663210|gb|EFX30519.1| pseudouridine kinase [Escherichia coli O55:H7 str. USDA 5905]
gi|408164045|gb|EKH91885.1| pseudouridine kinase [Escherichia coli 5905]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|157962769|ref|YP_001502803.1| ribokinase-like domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847769|gb|ABV88268.1| PfkB domain protein [Shewanella pealeana ATCC 700345]
Length = 363
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS ++ISALG D G +++ + AG+ +G + + T+ +
Sbjct: 93 GGVGRNIAENLARLGSDTHLISALGKDTYGQMIMTQCQQAGIDMKGCIQLDEFATSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD + ++ A+ + +EK L+ ++ + A +++VDANLS +L ++
Sbjct: 153 VLDGDSDMHVAINDMAILEK-LSVAVLKTHEEVLRRAELIIVDANLSAESL--EYLLSNF 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE- 184
+ P++ + VS K+ +I + + + PN E A LSG + ID + E
Sbjct: 210 SDRPIFVDTVSCAKAEKIKPFLSSVHTLKPNLKE----AEQLSGIS----IDSHDQLPEL 261
Query: 185 -SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+ F + +G++ + L+LGSDGV
Sbjct: 262 ANWFHS----------QGVKRIFLSLGSDGVF 283
>gi|16130104|ref|NP_416671.1| pseudouridine kinase [Escherichia coli str. K-12 substr. MG1655]
gi|170081788|ref|YP_001731108.1| hypothetical protein ECDH10B_2323 [Escherichia coli str. K-12
substr. DH10B]
gi|238901348|ref|YP_002927144.1| hypothetical protein BWG_1948 [Escherichia coli BW2952]
gi|301024340|ref|ZP_07188029.1| kinase, PfkB family [Escherichia coli MS 196-1]
gi|301644188|ref|ZP_07244196.1| kinase, PfkB family [Escherichia coli MS 146-1]
gi|331642791|ref|ZP_08343926.1| putative kinase [Escherichia coli H736]
gi|386281237|ref|ZP_10058899.1| pseudouridine kinase [Escherichia sp. 4_1_40B]
gi|386595051|ref|YP_006091451.1| PfkB domain-containing protein [Escherichia coli DH1]
gi|387612743|ref|YP_006115859.1| putative pyrimidine kinase [Escherichia coli ETEC H10407]
gi|387621876|ref|YP_006129503.1| hypothetical protein ECDH1ME8569_2102 [Escherichia coli DH1]
gi|388478215|ref|YP_490405.1| kinase [Escherichia coli str. K-12 substr. W3110]
gi|415778204|ref|ZP_11489250.1| uncharacterized sugar kinase yeiC [Escherichia coli 3431]
gi|417259777|ref|ZP_12047300.1| carbohydrate kinase, PfkB family [Escherichia coli 2.3916]
gi|417276680|ref|ZP_12064007.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2303]
gi|417292410|ref|ZP_12079691.1| carbohydrate kinase, PfkB family [Escherichia coli B41]
gi|417613631|ref|ZP_12264089.1| hypothetical protein ECSTECEH250_2689 [Escherichia coli STEC_EH250]
gi|417635094|ref|ZP_12285307.1| hypothetical protein ECSTECS1191_3014 [Escherichia coli STEC_S1191]
gi|417944637|ref|ZP_12587878.1| pseudouridine kinase [Escherichia coli XH140A]
gi|417976920|ref|ZP_12617709.1| pseudouridine kinase [Escherichia coli XH001]
gi|418303536|ref|ZP_12915330.1| uncharacterized sugar kinase yeiC [Escherichia coli UMNF18]
gi|418957473|ref|ZP_13509397.1| kinase, PfkB family [Escherichia coli J53]
gi|419143095|ref|ZP_13687835.1| pseudouridine kinase [Escherichia coli DEC6A]
gi|419149223|ref|ZP_13693876.1| pseudouridine kinase [Escherichia coli DEC6B]
gi|419154548|ref|ZP_13699111.1| pseudouridine kinase [Escherichia coli DEC6C]
gi|419159838|ref|ZP_13704343.1| pseudouridine kinase [Escherichia coli DEC6D]
gi|419164964|ref|ZP_13709421.1| pseudouridine kinase [Escherichia coli DEC6E]
gi|419809278|ref|ZP_14334164.1| pseudouridine kinase [Escherichia coli O32:H37 str. P4]
gi|419938818|ref|ZP_14455629.1| hypothetical protein EC75_06139 [Escherichia coli 75]
gi|422766775|ref|ZP_16820502.1| pfkB family protein carbohydrate kinase [Escherichia coli E1520]
gi|422771985|ref|ZP_16825674.1| pfkB family protein carbohydrate kinase [Escherichia coli E482]
gi|422819657|ref|ZP_16867868.1| pseudouridine kinase [Escherichia coli M919]
gi|423704451|ref|ZP_17678876.1| pseudouridine kinase [Escherichia coli H730]
gi|425273334|ref|ZP_18664746.1| pseudouridine kinase [Escherichia coli TW15901]
gi|425283876|ref|ZP_18674915.1| pseudouridine kinase [Escherichia coli TW00353]
gi|432417638|ref|ZP_19660243.1| pseudouridine kinase [Escherichia coli KTE44]
gi|432564419|ref|ZP_19801002.1| pseudouridine kinase [Escherichia coli KTE51]
gi|432576444|ref|ZP_19812905.1| pseudouridine kinase [Escherichia coli KTE56]
gi|432617235|ref|ZP_19853350.1| pseudouridine kinase [Escherichia coli KTE75]
gi|432637412|ref|ZP_19873283.1| pseudouridine kinase [Escherichia coli KTE81]
gi|432661399|ref|ZP_19897045.1| pseudouridine kinase [Escherichia coli KTE111]
gi|432685999|ref|ZP_19921297.1| pseudouridine kinase [Escherichia coli KTE156]
gi|432692139|ref|ZP_19927368.1| pseudouridine kinase [Escherichia coli KTE161]
gi|432704958|ref|ZP_19940060.1| pseudouridine kinase [Escherichia coli KTE171]
gi|432955624|ref|ZP_20147564.1| pseudouridine kinase [Escherichia coli KTE197]
gi|433048544|ref|ZP_20235898.1| pseudouridine kinase [Escherichia coli KTE120]
gi|450245590|ref|ZP_21900661.1| pseudouridine kinase [Escherichia coli S17]
gi|418386|sp|P30235.2|PSUK_ECOLI RecName: Full=Pseudouridine kinase
gi|405875|gb|AAA60507.1| yeiC [Escherichia coli]
gi|1788491|gb|AAC75227.1| pseudouridine kinase [Escherichia coli str. K-12 substr. MG1655]
gi|85675280|dbj|BAE76643.1| predicted kinase [Escherichia coli str. K12 substr. W3110]
gi|169889623|gb|ACB03330.1| predicted kinase [Escherichia coli str. K-12 substr. DH10B]
gi|238862603|gb|ACR64601.1| predicted kinase [Escherichia coli BW2952]
gi|260448740|gb|ACX39162.1| PfkB domain protein [Escherichia coli DH1]
gi|299880437|gb|EFI88648.1| kinase, PfkB family [Escherichia coli MS 196-1]
gi|301077486|gb|EFK92292.1| kinase, PfkB family [Escherichia coli MS 146-1]
gi|309702479|emb|CBJ01805.1| putative pyrimidine kinase [Escherichia coli ETEC H10407]
gi|315136799|dbj|BAJ43958.1| hypothetical protein ECDH1ME8569_2102 [Escherichia coli DH1]
gi|315615407|gb|EFU96039.1| uncharacterized sugar kinase yeiC [Escherichia coli 3431]
gi|323936780|gb|EGB33065.1| pfkB family protein carbohydrate kinase [Escherichia coli E1520]
gi|323940764|gb|EGB36952.1| pfkB family protein carbohydrate kinase [Escherichia coli E482]
gi|331039589|gb|EGI11809.1| putative kinase [Escherichia coli H736]
gi|339415634|gb|AEJ57306.1| uncharacterized sugar kinase yeiC [Escherichia coli UMNF18]
gi|342363681|gb|EGU27787.1| pseudouridine kinase [Escherichia coli XH140A]
gi|344193387|gb|EGV47468.1| pseudouridine kinase [Escherichia coli XH001]
gi|345361825|gb|EGW93982.1| hypothetical protein ECSTECEH250_2689 [Escherichia coli STEC_EH250]
gi|345387377|gb|EGX17199.1| hypothetical protein ECSTECS1191_3014 [Escherichia coli STEC_S1191]
gi|359332513|dbj|BAL38960.1| predicted kinase [Escherichia coli str. K-12 substr. MDS42]
gi|377992345|gb|EHV55492.1| pseudouridine kinase [Escherichia coli DEC6B]
gi|377994378|gb|EHV57505.1| pseudouridine kinase [Escherichia coli DEC6A]
gi|377997130|gb|EHV60237.1| pseudouridine kinase [Escherichia coli DEC6C]
gi|378007182|gb|EHV70151.1| pseudouridine kinase [Escherichia coli DEC6D]
gi|378011046|gb|EHV73991.1| pseudouridine kinase [Escherichia coli DEC6E]
gi|384380120|gb|EIE37987.1| kinase, PfkB family [Escherichia coli J53]
gi|385158208|gb|EIF20198.1| pseudouridine kinase [Escherichia coli O32:H37 str. P4]
gi|385536759|gb|EIF83645.1| pseudouridine kinase [Escherichia coli M919]
gi|385706368|gb|EIG43409.1| pseudouridine kinase [Escherichia coli H730]
gi|386121376|gb|EIG69991.1| pseudouridine kinase [Escherichia sp. 4_1_40B]
gi|386226500|gb|EII48802.1| carbohydrate kinase, PfkB family [Escherichia coli 2.3916]
gi|386240615|gb|EII77538.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2303]
gi|386254732|gb|EIJ04422.1| carbohydrate kinase, PfkB family [Escherichia coli B41]
gi|388409353|gb|EIL69649.1| hypothetical protein EC75_06139 [Escherichia coli 75]
gi|408193116|gb|EKI18669.1| pseudouridine kinase [Escherichia coli TW15901]
gi|408201566|gb|EKI26715.1| pseudouridine kinase [Escherichia coli TW00353]
gi|430939151|gb|ELC59368.1| pseudouridine kinase [Escherichia coli KTE44]
gi|431093347|gb|ELD99013.1| pseudouridine kinase [Escherichia coli KTE51]
gi|431115363|gb|ELE18887.1| pseudouridine kinase [Escherichia coli KTE56]
gi|431154176|gb|ELE54998.1| pseudouridine kinase [Escherichia coli KTE75]
gi|431171307|gb|ELE71486.1| pseudouridine kinase [Escherichia coli KTE81]
gi|431200515|gb|ELE99241.1| pseudouridine kinase [Escherichia coli KTE111]
gi|431222172|gb|ELF19463.1| pseudouridine kinase [Escherichia coli KTE156]
gi|431226933|gb|ELF24083.1| pseudouridine kinase [Escherichia coli KTE161]
gi|431243187|gb|ELF37576.1| pseudouridine kinase [Escherichia coli KTE171]
gi|431468295|gb|ELH48301.1| pseudouridine kinase [Escherichia coli KTE197]
gi|431564687|gb|ELI37856.1| pseudouridine kinase [Escherichia coli KTE120]
gi|449320212|gb|EMD10248.1| pseudouridine kinase [Escherichia coli S17]
gi|744201|prf||2014253BM yeiC gene
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|15802722|ref|NP_288749.1| hypothetical protein Z3423 [Escherichia coli O157:H7 str. EDL933]
gi|15832312|ref|NP_311085.1| hypothetical protein ECs3058 [Escherichia coli O157:H7 str. Sakai]
gi|168752602|ref|ZP_02777624.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4113]
gi|168758829|ref|ZP_02783836.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4401]
gi|168763828|ref|ZP_02788835.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4501]
gi|168767785|ref|ZP_02792792.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4486]
gi|168773117|ref|ZP_02798124.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4196]
gi|168780015|ref|ZP_02805022.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4076]
gi|168788981|ref|ZP_02813988.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC869]
gi|168802851|ref|ZP_02827858.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC508]
gi|195935545|ref|ZP_03080927.1| hypothetical protein EscherichcoliO157_03652 [Escherichia coli
O157:H7 str. EC4024]
gi|208812287|ref|ZP_03253616.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4045]
gi|208820292|ref|ZP_03260612.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4042]
gi|209398647|ref|YP_002271578.1| hypothetical protein ECH74115_3302 [Escherichia coli O157:H7 str.
EC4115]
gi|217326815|ref|ZP_03442898.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. TW14588]
gi|254794065|ref|YP_003078902.1| hypothetical protein ECSP_3044 [Escherichia coli O157:H7 str.
TW14359]
gi|261223374|ref|ZP_05937655.1| predicted kinase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259075|ref|ZP_05951608.1| predicted kinase [Escherichia coli O157:H7 str. FRIK966]
gi|291283420|ref|YP_003500238.1| Kinase, pfkB family protein [Escherichia coli O55:H7 str. CB9615]
gi|387507556|ref|YP_006159812.1| pseudouridine kinase [Escherichia coli O55:H7 str. RM12579]
gi|387883389|ref|YP_006313691.1| hypothetical protein CDCO157_2821 [Escherichia coli Xuzhou21]
gi|416310841|ref|ZP_11656576.1| Pseudouridine kinase [Escherichia coli O157:H7 str. 1044]
gi|416318261|ref|ZP_11660971.1| Pseudouridine kinase [Escherichia coli O157:H7 str. EC1212]
gi|416330510|ref|ZP_11669460.1| Pseudouridine kinase [Escherichia coli O157:H7 str. 1125]
gi|416787085|ref|ZP_11879202.1| pseudouridine kinase [Escherichia coli O157:H- str. 493-89]
gi|416798701|ref|ZP_11884119.1| pseudouridine kinase [Escherichia coli O157:H- str. H 2687]
gi|416809117|ref|ZP_11888804.1| pseudouridine kinase [Escherichia coli O55:H7 str. 3256-97]
gi|419046319|ref|ZP_13593256.1| pseudouridine kinase [Escherichia coli DEC3A]
gi|419051881|ref|ZP_13598753.1| pseudouridine kinase [Escherichia coli DEC3B]
gi|419070274|ref|ZP_13615898.1| pseudouridine kinase [Escherichia coli DEC3E]
gi|419076251|ref|ZP_13621770.1| pseudouridine kinase [Escherichia coli DEC3F]
gi|419087143|ref|ZP_13632501.1| pseudouridine kinase [Escherichia coli DEC4B]
gi|419093164|ref|ZP_13638450.1| pseudouridine kinase [Escherichia coli DEC4C]
gi|419098824|ref|ZP_13644024.1| pseudouridine kinase [Escherichia coli DEC4D]
gi|419104731|ref|ZP_13649860.1| pseudouridine kinase [Escherichia coli DEC4E]
gi|419110187|ref|ZP_13655246.1| pseudouridine kinase [Escherichia coli DEC4F]
gi|419115485|ref|ZP_13660504.1| pseudouridine kinase [Escherichia coli DEC5A]
gi|419121129|ref|ZP_13666087.1| pseudouridine kinase [Escherichia coli DEC5B]
gi|419126569|ref|ZP_13671455.1| pseudouridine kinase [Escherichia coli DEC5C]
gi|419132181|ref|ZP_13677019.1| pseudouridine kinase [Escherichia coli DEC5D]
gi|419137215|ref|ZP_13682011.1| pseudouridine kinase [Escherichia coli DEC5E]
gi|420276185|ref|ZP_14778469.1| pseudouridine kinase [Escherichia coli PA40]
gi|420281407|ref|ZP_14783645.1| pseudouridine kinase [Escherichia coli TW06591]
gi|420293122|ref|ZP_14795245.1| pseudouridine kinase [Escherichia coli TW11039]
gi|420298996|ref|ZP_14801045.1| pseudouridine kinase [Escherichia coli TW09109]
gi|420304869|ref|ZP_14806865.1| pseudouridine kinase [Escherichia coli TW10119]
gi|420310496|ref|ZP_14812429.1| pseudouridine kinase [Escherichia coli EC1738]
gi|420315894|ref|ZP_14817770.1| pseudouridine kinase [Escherichia coli EC1734]
gi|421818975|ref|ZP_16254473.1| pseudouridine kinase [Escherichia coli 10.0821]
gi|421824799|ref|ZP_16260166.1| pseudouridine kinase [Escherichia coli FRIK920]
gi|421831700|ref|ZP_16266987.1| pseudouridine kinase [Escherichia coli PA7]
gi|423725760|ref|ZP_17699870.1| pseudouridine kinase [Escherichia coli PA31]
gi|424078199|ref|ZP_17815203.1| pseudouridine kinase [Escherichia coli FDA505]
gi|424084655|ref|ZP_17821165.1| pseudouridine kinase [Escherichia coli FDA517]
gi|424091139|ref|ZP_17827084.1| pseudouridine kinase [Escherichia coli FRIK1996]
gi|424097713|ref|ZP_17833050.1| pseudouridine kinase [Escherichia coli FRIK1985]
gi|424103914|ref|ZP_17838713.1| pseudouridine kinase [Escherichia coli FRIK1990]
gi|424110617|ref|ZP_17844875.1| pseudouridine kinase [Escherichia coli 93-001]
gi|424116506|ref|ZP_17850370.1| pseudouridine kinase [Escherichia coli PA3]
gi|424122720|ref|ZP_17856068.1| pseudouridine kinase [Escherichia coli PA5]
gi|424128858|ref|ZP_17861782.1| pseudouridine kinase [Escherichia coli PA9]
gi|424135112|ref|ZP_17867598.1| pseudouridine kinase [Escherichia coli PA10]
gi|424141712|ref|ZP_17873625.1| pseudouridine kinase [Escherichia coli PA14]
gi|424148143|ref|ZP_17879541.1| pseudouridine kinase [Escherichia coli PA15]
gi|424154018|ref|ZP_17884994.1| pseudouridine kinase [Escherichia coli PA24]
gi|424247843|ref|ZP_17890478.1| pseudouridine kinase [Escherichia coli PA25]
gi|424324378|ref|ZP_17896399.1| pseudouridine kinase [Escherichia coli PA28]
gi|424450403|ref|ZP_17902128.1| pseudouridine kinase [Escherichia coli PA32]
gi|424456599|ref|ZP_17907761.1| pseudouridine kinase [Escherichia coli PA33]
gi|424462985|ref|ZP_17913465.1| pseudouridine kinase [Escherichia coli PA39]
gi|424469350|ref|ZP_17919196.1| pseudouridine kinase [Escherichia coli PA41]
gi|424475890|ref|ZP_17925233.1| pseudouridine kinase [Escherichia coli PA42]
gi|424481643|ref|ZP_17930642.1| pseudouridine kinase [Escherichia coli TW07945]
gi|424487790|ref|ZP_17936378.1| pseudouridine kinase [Escherichia coli TW09098]
gi|424494377|ref|ZP_17942153.1| pseudouridine kinase [Escherichia coli TW09195]
gi|424501160|ref|ZP_17948084.1| pseudouridine kinase [Escherichia coli EC4203]
gi|424507393|ref|ZP_17953823.1| pseudouridine kinase [Escherichia coli EC4196]
gi|424514716|ref|ZP_17959433.1| pseudouridine kinase [Escherichia coli TW14313]
gi|424521039|ref|ZP_17965182.1| pseudouridine kinase [Escherichia coli TW14301]
gi|424526874|ref|ZP_17970608.1| pseudouridine kinase [Escherichia coli EC4421]
gi|424533035|ref|ZP_17976400.1| pseudouridine kinase [Escherichia coli EC4422]
gi|424539101|ref|ZP_17982070.1| pseudouridine kinase [Escherichia coli EC4013]
gi|424545118|ref|ZP_17987567.1| pseudouridine kinase [Escherichia coli EC4402]
gi|424551373|ref|ZP_17993257.1| pseudouridine kinase [Escherichia coli EC4439]
gi|424557560|ref|ZP_17998997.1| pseudouridine kinase [Escherichia coli EC4436]
gi|424563906|ref|ZP_18004926.1| pseudouridine kinase [Escherichia coli EC4437]
gi|424570032|ref|ZP_18010617.1| pseudouridine kinase [Escherichia coli EC4448]
gi|424576195|ref|ZP_18016298.1| pseudouridine kinase [Escherichia coli EC1845]
gi|424582038|ref|ZP_18021707.1| pseudouridine kinase [Escherichia coli EC1863]
gi|425098758|ref|ZP_18501510.1| pseudouridine kinase [Escherichia coli 3.4870]
gi|425104887|ref|ZP_18507216.1| pseudouridine kinase [Escherichia coli 5.2239]
gi|425110787|ref|ZP_18512723.1| pseudouridine kinase [Escherichia coli 6.0172]
gi|425126746|ref|ZP_18527942.1| pseudouridine kinase [Escherichia coli 8.0586]
gi|425132503|ref|ZP_18533367.1| pseudouridine kinase [Escherichia coli 8.2524]
gi|425138972|ref|ZP_18539378.1| pseudouridine kinase [Escherichia coli 10.0833]
gi|425150880|ref|ZP_18550514.1| pseudouridine kinase [Escherichia coli 88.0221]
gi|425156761|ref|ZP_18556042.1| pseudouridine kinase [Escherichia coli PA34]
gi|425163200|ref|ZP_18562095.1| pseudouridine kinase [Escherichia coli FDA506]
gi|425168865|ref|ZP_18567364.1| pseudouridine kinase [Escherichia coli FDA507]
gi|425175001|ref|ZP_18573131.1| pseudouridine kinase [Escherichia coli FDA504]
gi|425181030|ref|ZP_18578736.1| pseudouridine kinase [Escherichia coli FRIK1999]
gi|425187294|ref|ZP_18584577.1| pseudouridine kinase [Escherichia coli FRIK1997]
gi|425194064|ref|ZP_18590847.1| pseudouridine kinase [Escherichia coli NE1487]
gi|425200499|ref|ZP_18596729.1| pseudouridine kinase [Escherichia coli NE037]
gi|425206922|ref|ZP_18602734.1| pseudouridine kinase [Escherichia coli FRIK2001]
gi|425212613|ref|ZP_18608034.1| pseudouridine kinase [Escherichia coli PA4]
gi|425218728|ref|ZP_18613719.1| pseudouridine kinase [Escherichia coli PA23]
gi|425225256|ref|ZP_18619757.1| pseudouridine kinase [Escherichia coli PA49]
gi|425231620|ref|ZP_18625669.1| pseudouridine kinase [Escherichia coli PA45]
gi|425237537|ref|ZP_18631267.1| pseudouridine kinase [Escherichia coli TT12B]
gi|425243757|ref|ZP_18637077.1| pseudouridine kinase [Escherichia coli MA6]
gi|425255738|ref|ZP_18648273.1| pseudouridine kinase [Escherichia coli CB7326]
gi|425267992|ref|ZP_18659636.1| pseudouridine kinase [Escherichia coli 5412]
gi|425295427|ref|ZP_18685647.1| pseudouridine kinase [Escherichia coli PA38]
gi|425312098|ref|ZP_18701300.1| pseudouridine kinase [Escherichia coli EC1735]
gi|425318043|ref|ZP_18706853.1| pseudouridine kinase [Escherichia coli EC1736]
gi|425324144|ref|ZP_18712534.1| pseudouridine kinase [Escherichia coli EC1737]
gi|425330427|ref|ZP_18718316.1| pseudouridine kinase [Escherichia coli EC1846]
gi|425336591|ref|ZP_18723998.1| pseudouridine kinase [Escherichia coli EC1847]
gi|425342999|ref|ZP_18729916.1| pseudouridine kinase [Escherichia coli EC1848]
gi|425348799|ref|ZP_18735298.1| pseudouridine kinase [Escherichia coli EC1849]
gi|425355096|ref|ZP_18741186.1| pseudouridine kinase [Escherichia coli EC1850]
gi|425361056|ref|ZP_18746729.1| pseudouridine kinase [Escherichia coli EC1856]
gi|425367226|ref|ZP_18752424.1| pseudouridine kinase [Escherichia coli EC1862]
gi|425373602|ref|ZP_18758268.1| pseudouridine kinase [Escherichia coli EC1864]
gi|425386449|ref|ZP_18770029.1| pseudouridine kinase [Escherichia coli EC1866]
gi|425393171|ref|ZP_18776301.1| pseudouridine kinase [Escherichia coli EC1868]
gi|425399269|ref|ZP_18781999.1| pseudouridine kinase [Escherichia coli EC1869]
gi|425405347|ref|ZP_18787603.1| pseudouridine kinase [Escherichia coli EC1870]
gi|425411752|ref|ZP_18793543.1| pseudouridine kinase [Escherichia coli NE098]
gi|425418083|ref|ZP_18799377.1| pseudouridine kinase [Escherichia coli FRIK523]
gi|425429412|ref|ZP_18810038.1| pseudouridine kinase [Escherichia coli 0.1304]
gi|428947782|ref|ZP_19020088.1| pseudouridine kinase [Escherichia coli 88.1467]
gi|428953883|ref|ZP_19025698.1| pseudouridine kinase [Escherichia coli 88.1042]
gi|428959819|ref|ZP_19031153.1| pseudouridine kinase [Escherichia coli 89.0511]
gi|428966388|ref|ZP_19037166.1| pseudouridine kinase [Escherichia coli 90.0091]
gi|428972291|ref|ZP_19042653.1| pseudouridine kinase [Escherichia coli 90.0039]
gi|428978680|ref|ZP_19048524.1| pseudouridine kinase [Escherichia coli 90.2281]
gi|428984524|ref|ZP_19053936.1| pseudouridine kinase [Escherichia coli 93.0055]
gi|428990642|ref|ZP_19059649.1| pseudouridine kinase [Escherichia coli 93.0056]
gi|428996442|ref|ZP_19065071.1| pseudouridine kinase [Escherichia coli 94.0618]
gi|429002681|ref|ZP_19070842.1| pseudouridine kinase [Escherichia coli 95.0183]
gi|429008823|ref|ZP_19076367.1| pseudouridine kinase [Escherichia coli 95.1288]
gi|429015268|ref|ZP_19082189.1| pseudouridine kinase [Escherichia coli 95.0943]
gi|429021234|ref|ZP_19087773.1| pseudouridine kinase [Escherichia coli 96.0428]
gi|429027231|ref|ZP_19093264.1| pseudouridine kinase [Escherichia coli 96.0427]
gi|429033439|ref|ZP_19098981.1| pseudouridine kinase [Escherichia coli 96.0939]
gi|429039538|ref|ZP_19104671.1| pseudouridine kinase [Escherichia coli 96.0932]
gi|429045444|ref|ZP_19110175.1| pseudouridine kinase [Escherichia coli 96.0107]
gi|429050837|ref|ZP_19115415.1| pseudouridine kinase [Escherichia coli 97.0003]
gi|429056169|ref|ZP_19120521.1| pseudouridine kinase [Escherichia coli 97.1742]
gi|429061713|ref|ZP_19125752.1| pseudouridine kinase [Escherichia coli 97.0007]
gi|429068021|ref|ZP_19131505.1| pseudouridine kinase [Escherichia coli 99.0672]
gi|429073922|ref|ZP_19137186.1| pseudouridine kinase [Escherichia coli 99.0678]
gi|429079119|ref|ZP_19142266.1| pseudouridine kinase [Escherichia coli 99.0713]
gi|429827122|ref|ZP_19358200.1| pseudouridine kinase [Escherichia coli 96.0109]
gi|429833448|ref|ZP_19363846.1| pseudouridine kinase [Escherichia coli 97.0010]
gi|444925708|ref|ZP_21245024.1| pseudouridine kinase [Escherichia coli 09BKT078844]
gi|444931413|ref|ZP_21250470.1| pseudouridine kinase [Escherichia coli 99.0814]
gi|444936822|ref|ZP_21255617.1| pseudouridine kinase [Escherichia coli 99.0815]
gi|444942449|ref|ZP_21260985.1| pseudouridine kinase [Escherichia coli 99.0816]
gi|444948072|ref|ZP_21266394.1| pseudouridine kinase [Escherichia coli 99.0839]
gi|444953520|ref|ZP_21271631.1| pseudouridine kinase [Escherichia coli 99.0848]
gi|444958992|ref|ZP_21276861.1| pseudouridine kinase [Escherichia coli 99.1753]
gi|444964171|ref|ZP_21281803.1| pseudouridine kinase [Escherichia coli 99.1775]
gi|444970141|ref|ZP_21287517.1| pseudouridine kinase [Escherichia coli 99.1793]
gi|444975400|ref|ZP_21292546.1| pseudouridine kinase [Escherichia coli 99.1805]
gi|444980874|ref|ZP_21297793.1| pseudouridine kinase [Escherichia coli ATCC 700728]
gi|444986224|ref|ZP_21303017.1| pseudouridine kinase [Escherichia coli PA11]
gi|444991538|ref|ZP_21308194.1| pseudouridine kinase [Escherichia coli PA19]
gi|444996831|ref|ZP_21313342.1| pseudouridine kinase [Escherichia coli PA13]
gi|445002387|ref|ZP_21318787.1| pseudouridine kinase [Escherichia coli PA2]
gi|445007887|ref|ZP_21324140.1| pseudouridine kinase [Escherichia coli PA47]
gi|445018797|ref|ZP_21334773.1| pseudouridine kinase [Escherichia coli PA8]
gi|445024304|ref|ZP_21340139.1| pseudouridine kinase [Escherichia coli 7.1982]
gi|445029579|ref|ZP_21345267.1| pseudouridine kinase [Escherichia coli 99.1781]
gi|445035039|ref|ZP_21350581.1| pseudouridine kinase [Escherichia coli 99.1762]
gi|445040666|ref|ZP_21356055.1| pseudouridine kinase [Escherichia coli PA35]
gi|445045862|ref|ZP_21361126.1| pseudouridine kinase [Escherichia coli 3.4880]
gi|445051434|ref|ZP_21366499.1| pseudouridine kinase [Escherichia coli 95.0083]
gi|445057195|ref|ZP_21372065.1| pseudouridine kinase [Escherichia coli 99.0670]
gi|452971371|ref|ZP_21969598.1| pseudouridine kinase [Escherichia coli O157:H7 str. EC4009]
gi|12516492|gb|AAG57304.1|AE005449_2 putative kinase [Escherichia coli O157:H7 str. EDL933]
gi|13362527|dbj|BAB36481.1| putative kinase [Escherichia coli O157:H7 str. Sakai]
gi|187771141|gb|EDU34985.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4196]
gi|188013599|gb|EDU51721.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4113]
gi|189002149|gb|EDU71135.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4076]
gi|189354416|gb|EDU72835.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4401]
gi|189362977|gb|EDU81396.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4486]
gi|189366070|gb|EDU84486.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4501]
gi|189371327|gb|EDU89743.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC869]
gi|189375276|gb|EDU93692.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC508]
gi|208733564|gb|EDZ82251.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4045]
gi|208740415|gb|EDZ88097.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4042]
gi|209160047|gb|ACI37480.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4115]
gi|209766088|gb|ACI81356.1| putative kinase [Escherichia coli]
gi|209766090|gb|ACI81357.1| putative kinase [Escherichia coli]
gi|209766092|gb|ACI81358.1| putative kinase [Escherichia coli]
gi|209766094|gb|ACI81359.1| putative kinase [Escherichia coli]
gi|209766096|gb|ACI81360.1| putative kinase [Escherichia coli]
gi|217319182|gb|EEC27607.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. TW14588]
gi|254593465|gb|ACT72826.1| predicted kinase [Escherichia coli O157:H7 str. TW14359]
gi|290763293|gb|ADD57254.1| Kinase, pfkB family protein [Escherichia coli O55:H7 str. CB9615]
gi|320192208|gb|EFW66853.1| Pseudouridine kinase [Escherichia coli O157:H7 str. EC1212]
gi|320646625|gb|EFX15536.1| pseudouridine kinase [Escherichia coli O157:H- str. 493-89]
gi|320651880|gb|EFX20255.1| pseudouridine kinase [Escherichia coli O157:H- str. H 2687]
gi|320657605|gb|EFX25403.1| pseudouridine kinase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|326339519|gb|EGD63330.1| Pseudouridine kinase [Escherichia coli O157:H7 str. 1125]
gi|326343980|gb|EGD67741.1| Pseudouridine kinase [Escherichia coli O157:H7 str. 1044]
gi|374359550|gb|AEZ41257.1| pseudouridine kinase [Escherichia coli O55:H7 str. RM12579]
gi|377893149|gb|EHU57588.1| pseudouridine kinase [Escherichia coli DEC3A]
gi|377893566|gb|EHU58000.1| pseudouridine kinase [Escherichia coli DEC3B]
gi|377912484|gb|EHU76643.1| pseudouridine kinase [Escherichia coli DEC3E]
gi|377921608|gb|EHU85604.1| pseudouridine kinase [Escherichia coli DEC3F]
gi|377930671|gb|EHU94551.1| pseudouridine kinase [Escherichia coli DEC4B]
gi|377942303|gb|EHV06038.1| pseudouridine kinase [Escherichia coli DEC4C]
gi|377942677|gb|EHV06410.1| pseudouridine kinase [Escherichia coli DEC4D]
gi|377947214|gb|EHV10881.1| pseudouridine kinase [Escherichia coli DEC4E]
gi|377957465|gb|EHV20997.1| pseudouridine kinase [Escherichia coli DEC4F]
gi|377961280|gb|EHV24754.1| pseudouridine kinase [Escherichia coli DEC5A]
gi|377967070|gb|EHV30477.1| pseudouridine kinase [Escherichia coli DEC5B]
gi|377975034|gb|EHV38356.1| pseudouridine kinase [Escherichia coli DEC5C]
gi|377975748|gb|EHV39065.1| pseudouridine kinase [Escherichia coli DEC5D]
gi|377984208|gb|EHV47443.1| pseudouridine kinase [Escherichia coli DEC5E]
gi|386796847|gb|AFJ29881.1| hypothetical protein CDCO157_2821 [Escherichia coli Xuzhou21]
gi|390641674|gb|EIN21098.1| pseudouridine kinase [Escherichia coli FRIK1996]
gi|390643136|gb|EIN22499.1| pseudouridine kinase [Escherichia coli FDA517]
gi|390644165|gb|EIN23458.1| pseudouridine kinase [Escherichia coli FDA505]
gi|390660832|gb|EIN38522.1| pseudouridine kinase [Escherichia coli 93-001]
gi|390662337|gb|EIN39941.1| pseudouridine kinase [Escherichia coli FRIK1985]
gi|390664136|gb|EIN41598.1| pseudouridine kinase [Escherichia coli FRIK1990]
gi|390677938|gb|EIN53938.1| pseudouridine kinase [Escherichia coli PA3]
gi|390681150|gb|EIN56954.1| pseudouridine kinase [Escherichia coli PA5]
gi|390683838|gb|EIN59490.1| pseudouridine kinase [Escherichia coli PA9]
gi|390697060|gb|EIN71494.1| pseudouridine kinase [Escherichia coli PA10]
gi|390701113|gb|EIN75368.1| pseudouridine kinase [Escherichia coli PA15]
gi|390701813|gb|EIN76031.1| pseudouridine kinase [Escherichia coli PA14]
gi|390723095|gb|EIN95715.1| pseudouridine kinase [Escherichia coli PA25]
gi|390724640|gb|EIN97189.1| pseudouridine kinase [Escherichia coli PA24]
gi|390727922|gb|EIO00305.1| pseudouridine kinase [Escherichia coli PA28]
gi|390743011|gb|EIO13998.1| pseudouridine kinase [Escherichia coli PA31]
gi|390743339|gb|EIO14316.1| pseudouridine kinase [Escherichia coli PA32]
gi|390745852|gb|EIO16632.1| pseudouridine kinase [Escherichia coli PA33]
gi|390757595|gb|EIO27065.1| pseudouridine kinase [Escherichia coli PA40]
gi|390767796|gb|EIO36862.1| pseudouridine kinase [Escherichia coli PA41]
gi|390769091|gb|EIO38043.1| pseudouridine kinase [Escherichia coli PA39]
gi|390769536|gb|EIO38463.1| pseudouridine kinase [Escherichia coli PA42]
gi|390781694|gb|EIO49371.1| pseudouridine kinase [Escherichia coli TW06591]
gi|390791429|gb|EIO58820.1| pseudouridine kinase [Escherichia coli TW07945]
gi|390797208|gb|EIO64464.1| pseudouridine kinase [Escherichia coli TW11039]
gi|390806519|gb|EIO73422.1| pseudouridine kinase [Escherichia coli TW09098]
gi|390806691|gb|EIO73593.1| pseudouridine kinase [Escherichia coli TW09109]
gi|390815891|gb|EIO82403.1| pseudouridine kinase [Escherichia coli TW10119]
gi|390826268|gb|EIO92124.1| pseudouridine kinase [Escherichia coli EC4203]
gi|390830846|gb|EIO96334.1| pseudouridine kinase [Escherichia coli TW09195]
gi|390831650|gb|EIO97018.1| pseudouridine kinase [Escherichia coli EC4196]
gi|390846217|gb|EIP09821.1| pseudouridine kinase [Escherichia coli TW14301]
gi|390847523|gb|EIP11065.1| pseudouridine kinase [Escherichia coli TW14313]
gi|390850853|gb|EIP14194.1| pseudouridine kinase [Escherichia coli EC4421]
gi|390861641|gb|EIP23885.1| pseudouridine kinase [Escherichia coli EC4422]
gi|390865844|gb|EIP27838.1| pseudouridine kinase [Escherichia coli EC4013]
gi|390871146|gb|EIP32588.1| pseudouridine kinase [Escherichia coli EC4402]
gi|390878855|gb|EIP39665.1| pseudouridine kinase [Escherichia coli EC4439]
gi|390883940|gb|EIP44329.1| pseudouridine kinase [Escherichia coli EC4436]
gi|390893923|gb|EIP53457.1| pseudouridine kinase [Escherichia coli EC4437]
gi|390896195|gb|EIP55586.1| pseudouridine kinase [Escherichia coli EC4448]
gi|390899775|gb|EIP59011.1| pseudouridine kinase [Escherichia coli EC1738]
gi|390907884|gb|EIP66725.1| pseudouridine kinase [Escherichia coli EC1734]
gi|390919543|gb|EIP77892.1| pseudouridine kinase [Escherichia coli EC1863]
gi|390920512|gb|EIP78780.1| pseudouridine kinase [Escherichia coli EC1845]
gi|408064072|gb|EKG98554.1| pseudouridine kinase [Escherichia coli PA7]
gi|408067851|gb|EKH02279.1| pseudouridine kinase [Escherichia coli FRIK920]
gi|408071145|gb|EKH05498.1| pseudouridine kinase [Escherichia coli PA34]
gi|408078788|gb|EKH12916.1| pseudouridine kinase [Escherichia coli FDA506]
gi|408083097|gb|EKH17015.1| pseudouridine kinase [Escherichia coli FDA507]
gi|408091359|gb|EKH24590.1| pseudouridine kinase [Escherichia coli FDA504]
gi|408097470|gb|EKH30361.1| pseudouridine kinase [Escherichia coli FRIK1999]
gi|408104176|gb|EKH36498.1| pseudouridine kinase [Escherichia coli FRIK1997]
gi|408108405|gb|EKH40408.1| pseudouridine kinase [Escherichia coli NE1487]
gi|408115211|gb|EKH46677.1| pseudouridine kinase [Escherichia coli NE037]
gi|408121239|gb|EKH52200.1| pseudouridine kinase [Escherichia coli FRIK2001]
gi|408127791|gb|EKH58228.1| pseudouridine kinase [Escherichia coli PA4]
gi|408138749|gb|EKH68405.1| pseudouridine kinase [Escherichia coli PA23]
gi|408140405|gb|EKH69921.1| pseudouridine kinase [Escherichia coli PA49]
gi|408146021|gb|EKH75164.1| pseudouridine kinase [Escherichia coli PA45]
gi|408155378|gb|EKH83701.1| pseudouridine kinase [Escherichia coli TT12B]
gi|408160036|gb|EKH88080.1| pseudouridine kinase [Escherichia coli MA6]
gi|408173511|gb|EKI00531.1| pseudouridine kinase [Escherichia coli CB7326]
gi|408183053|gb|EKI09527.1| pseudouridine kinase [Escherichia coli 5412]
gi|408217985|gb|EKI42219.1| pseudouridine kinase [Escherichia coli PA38]
gi|408227712|gb|EKI51294.1| pseudouridine kinase [Escherichia coli EC1735]
gi|408238665|gb|EKI61451.1| pseudouridine kinase [Escherichia coli EC1736]
gi|408243113|gb|EKI65657.1| pseudouridine kinase [Escherichia coli EC1737]
gi|408247489|gb|EKI69689.1| pseudouridine kinase [Escherichia coli EC1846]
gi|408256572|gb|EKI77947.1| pseudouridine kinase [Escherichia coli EC1847]
gi|408259274|gb|EKI80461.1| pseudouridine kinase [Escherichia coli EC1848]
gi|408265666|gb|EKI86348.1| pseudouridine kinase [Escherichia coli EC1849]
gi|408274972|gb|EKI94954.1| pseudouridine kinase [Escherichia coli EC1850]
gi|408277252|gb|EKI97062.1| pseudouridine kinase [Escherichia coli EC1856]
gi|408287086|gb|EKJ05982.1| pseudouridine kinase [Escherichia coli EC1862]
gi|408291255|gb|EKJ09889.1| pseudouridine kinase [Escherichia coli EC1864]
gi|408308282|gb|EKJ25552.1| pseudouridine kinase [Escherichia coli EC1868]
gi|408308456|gb|EKJ25725.1| pseudouridine kinase [Escherichia coli EC1866]
gi|408319464|gb|EKJ35600.1| pseudouridine kinase [Escherichia coli EC1869]
gi|408326199|gb|EKJ42023.1| pseudouridine kinase [Escherichia coli EC1870]
gi|408326818|gb|EKJ42587.1| pseudouridine kinase [Escherichia coli NE098]
gi|408336841|gb|EKJ51589.1| pseudouridine kinase [Escherichia coli FRIK523]
gi|408346665|gb|EKJ60951.1| pseudouridine kinase [Escherichia coli 0.1304]
gi|408550078|gb|EKK27423.1| pseudouridine kinase [Escherichia coli 5.2239]
gi|408550799|gb|EKK28115.1| pseudouridine kinase [Escherichia coli 3.4870]
gi|408551356|gb|EKK28637.1| pseudouridine kinase [Escherichia coli 6.0172]
gi|408570271|gb|EKK46251.1| pseudouridine kinase [Escherichia coli 8.0586]
gi|408579870|gb|EKK55318.1| pseudouridine kinase [Escherichia coli 10.0833]
gi|408581508|gb|EKK56843.1| pseudouridine kinase [Escherichia coli 8.2524]
gi|408596603|gb|EKK70728.1| pseudouridine kinase [Escherichia coli 88.0221]
gi|408612732|gb|EKK86066.1| pseudouridine kinase [Escherichia coli 10.0821]
gi|427205032|gb|EKV75292.1| pseudouridine kinase [Escherichia coli 88.1042]
gi|427207408|gb|EKV77577.1| pseudouridine kinase [Escherichia coli 89.0511]
gi|427208641|gb|EKV78730.1| pseudouridine kinase [Escherichia coli 88.1467]
gi|427222205|gb|EKV90997.1| pseudouridine kinase [Escherichia coli 90.0091]
gi|427224654|gb|EKV93353.1| pseudouridine kinase [Escherichia coli 90.2281]
gi|427228033|gb|EKV96517.1| pseudouridine kinase [Escherichia coli 90.0039]
gi|427242270|gb|EKW09685.1| pseudouridine kinase [Escherichia coli 93.0056]
gi|427242826|gb|EKW10223.1| pseudouridine kinase [Escherichia coli 93.0055]
gi|427246423|gb|EKW13637.1| pseudouridine kinase [Escherichia coli 94.0618]
gi|427261679|gb|EKW27596.1| pseudouridine kinase [Escherichia coli 95.0183]
gi|427262244|gb|EKW28145.1| pseudouridine kinase [Escherichia coli 95.0943]
gi|427265001|gb|EKW30628.1| pseudouridine kinase [Escherichia coli 95.1288]
gi|427276796|gb|EKW41361.1| pseudouridine kinase [Escherichia coli 96.0428]
gi|427279634|gb|EKW44045.1| pseudouridine kinase [Escherichia coli 96.0427]
gi|427283401|gb|EKW47609.1| pseudouridine kinase [Escherichia coli 96.0939]
gi|427292163|gb|EKW55519.1| pseudouridine kinase [Escherichia coli 96.0932]
gi|427299536|gb|EKW62507.1| pseudouridine kinase [Escherichia coli 96.0107]
gi|427300763|gb|EKW63688.1| pseudouridine kinase [Escherichia coli 97.0003]
gi|427313571|gb|EKW75672.1| pseudouridine kinase [Escherichia coli 97.1742]
gi|427315999|gb|EKW77973.1| pseudouridine kinase [Escherichia coli 97.0007]
gi|427319711|gb|EKW81514.1| pseudouridine kinase [Escherichia coli 99.0672]
gi|427328528|gb|EKW89890.1| pseudouridine kinase [Escherichia coli 99.0678]
gi|427329449|gb|EKW90775.1| pseudouridine kinase [Escherichia coli 99.0713]
gi|429254196|gb|EKY38636.1| pseudouridine kinase [Escherichia coli 96.0109]
gi|429255920|gb|EKY40201.1| pseudouridine kinase [Escherichia coli 97.0010]
gi|444538650|gb|ELV18497.1| pseudouridine kinase [Escherichia coli 99.0814]
gi|444540140|gb|ELV19839.1| pseudouridine kinase [Escherichia coli 09BKT078844]
gi|444547800|gb|ELV26357.1| pseudouridine kinase [Escherichia coli 99.0815]
gi|444557652|gb|ELV34978.1| pseudouridine kinase [Escherichia coli 99.0839]
gi|444558862|gb|ELV36123.1| pseudouridine kinase [Escherichia coli 99.0816]
gi|444563834|gb|ELV40810.1| pseudouridine kinase [Escherichia coli 99.0848]
gi|444573511|gb|ELV49876.1| pseudouridine kinase [Escherichia coli 99.1753]
gi|444577987|gb|ELV54080.1| pseudouridine kinase [Escherichia coli 99.1775]
gi|444579694|gb|ELV55671.1| pseudouridine kinase [Escherichia coli 99.1793]
gi|444593669|gb|ELV68876.1| pseudouridine kinase [Escherichia coli ATCC 700728]
gi|444593929|gb|ELV69133.1| pseudouridine kinase [Escherichia coli PA11]
gi|444596177|gb|ELV71260.1| pseudouridine kinase [Escherichia coli 99.1805]
gi|444607387|gb|ELV81965.1| pseudouridine kinase [Escherichia coli PA13]
gi|444607692|gb|ELV82260.1| pseudouridine kinase [Escherichia coli PA19]
gi|444616246|gb|ELV90414.1| pseudouridine kinase [Escherichia coli PA2]
gi|444624151|gb|ELV98056.1| pseudouridine kinase [Escherichia coli PA47]
gi|444630193|gb|ELW03858.1| pseudouridine kinase [Escherichia coli PA8]
gi|444639008|gb|ELW12329.1| pseudouridine kinase [Escherichia coli 7.1982]
gi|444641914|gb|ELW15130.1| pseudouridine kinase [Escherichia coli 99.1781]
gi|444645543|gb|ELW18605.1| pseudouridine kinase [Escherichia coli 99.1762]
gi|444654741|gb|ELW27388.1| pseudouridine kinase [Escherichia coli PA35]
gi|444660159|gb|ELW32532.1| pseudouridine kinase [Escherichia coli 3.4880]
gi|444665161|gb|ELW37304.1| pseudouridine kinase [Escherichia coli 95.0083]
gi|444669944|gb|ELW41878.1| pseudouridine kinase [Escherichia coli 99.0670]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|417286398|ref|ZP_12073687.1| carbohydrate kinase, PfkB family [Escherichia coli TW07793]
gi|386249857|gb|EII96026.1| carbohydrate kinase, PfkB family [Escherichia coli TW07793]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|301021063|ref|ZP_07185106.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|432543778|ref|ZP_19780621.1| pseudouridine kinase [Escherichia coli KTE236]
gi|432549268|ref|ZP_19786036.1| pseudouridine kinase [Escherichia coli KTE237]
gi|432622417|ref|ZP_19858448.1| pseudouridine kinase [Escherichia coli KTE76]
gi|300398315|gb|EFJ81853.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|431074188|gb|ELD81752.1| pseudouridine kinase [Escherichia coli KTE236]
gi|431079546|gb|ELD86500.1| pseudouridine kinase [Escherichia coli KTE237]
gi|431159217|gb|ELE59774.1| pseudouridine kinase [Escherichia coli KTE76]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|397659048|ref|YP_006499750.1| sugar kinase YeiI [Klebsiella oxytoca E718]
gi|394347275|gb|AFN33396.1| putative sugar kinase YeiI [Klebsiella oxytoca E718]
Length = 363
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 20/224 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ +L +A
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVVLVDCNLTEQSLEWVFTLAN- 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L G+ + DR++
Sbjct: 211 -GIPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGQAIENDADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
A+ L E+G + VV+ D V CS+ R+ L
Sbjct: 261 -------ALAWLHERGTQRVVICSEDDAV-FCSEAGGERFRMSL 296
>gi|419920676|ref|ZP_14438787.1| hypothetical protein ECKD2_21517 [Escherichia coli KD2]
gi|388384303|gb|EIL46037.1| hypothetical protein ECKD2_21517 [Escherichia coli KD2]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|300918810|ref|ZP_07135379.1| kinase, PfkB family [Escherichia coli MS 115-1]
gi|419922160|ref|ZP_14440182.1| hypothetical protein EC54115_04500 [Escherichia coli 541-15]
gi|432851457|ref|ZP_20081842.1| pseudouridine kinase [Escherichia coli KTE144]
gi|300414053|gb|EFJ97363.1| kinase, PfkB family [Escherichia coli MS 115-1]
gi|388396736|gb|EIL57810.1| hypothetical protein EC54115_04500 [Escherichia coli 541-15]
gi|431399795|gb|ELG83185.1| pseudouridine kinase [Escherichia coli KTE144]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|419370671|ref|ZP_13911790.1| pseudouridine kinase [Escherichia coli DEC14A]
gi|378217265|gb|EHX77544.1| pseudouridine kinase [Escherichia coli DEC14A]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|308048101|ref|YP_003911667.1| PfkB domain-containing protein [Ferrimonas balearica DSM 9799]
gi|307630291|gb|ADN74593.1| PfkB domain protein [Ferrimonas balearica DSM 9799]
Length = 363
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ +++LGS+ +SALG D L+E + AG+ TE + T+ +
Sbjct: 93 GGVGRNIADNLARLGSRVEFVSALGDDRWAEQLIESCRLAGVGTEHCLKIAGATTSSYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE+ A+ + IE+ L + + + I ASV+++DANLS AL A
Sbjct: 153 LHDSDGEMRLALNDMSLIER-LDAEQMERRRGPIDRASVVVLDANLSEDAL--ETLFARP 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPN--EDELVAMANALSGENMFRPIDRNKHSA 183
+ PV +PVS K+ ++ + I + PN E EL++ S E++ R D
Sbjct: 210 LDAPVLVDPVSRAKAHKLKPFLAQIDTLKPNALEAELLSGHRLDSDEDLPRVAD------ 263
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
L + G++ V+L+LGS G
Sbjct: 264 ------------ALHQLGVKRVLLSLGSRG 281
>gi|208805858|ref|ZP_03248195.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4206]
gi|208725659|gb|EDZ75260.1| kinase, pfkB family protein [Escherichia coli O157:H7 str. EC4206]
Length = 361
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|423124870|ref|ZP_17112549.1| hypothetical protein HMPREF9694_01561 [Klebsiella oxytoca 10-5250]
gi|376400315|gb|EHT12928.1| hypothetical protein HMPREF9694_01561 [Klebsiella oxytoca 10-5250]
Length = 362
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ ++ LTP + Q+ ++ A V++VD NL+ +L +
Sbjct: 153 IANPQEETVLAINDTHILQS-LTPQLLNQYRDLLTHAGVVLVDCNLTEQSLEWVFTLTNA 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ RI + I + P EL L GE + DR++
Sbjct: 212 --IPVFVDTVSEFKAHRIRPWLGKIHTLKPTLREL----QILWGEPIENEADRDR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229
A+ L EKG + VV+ D + CS+ R+ L
Sbjct: 261 -------ALAWLHEKGTQRVVIC-SEDDSIFCSEAGGERFRMSL 296
>gi|422780918|ref|ZP_16833703.1| pfkB family protein carbohydrate kinase [Escherichia coli TW10509]
gi|323977636|gb|EGB72722.1| pfkB family protein carbohydrate kinase [Escherichia coli TW10509]
Length = 313
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+P++ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPIFVDPVSAWKCVKVRDRLNLIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|307210846|gb|EFN87199.1| Uncharacterized sugar kinase yeiC [Harpegnathos saltator]
Length = 175
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE + KLG + +IS +G D G ++++ S G E ++R D+DTA +
Sbjct: 49 GGVGRNIAEALIKLGLANTRLISVVGDDEHGRLIVD---SLGAGAETVKRLPDVDTARFT 105
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L+ NGE + + +ES + P+ IR+ H+ AS+L++DANL + IA+
Sbjct: 106 VVLNGNGECSFCINEMESFAA-IAPELIREHRSHLEEASLLVLDANLPTDTMRYVLDIAS 164
Query: 125 ECNIPVWF 132
+ N+P F
Sbjct: 165 QANVPSEF 172
>gi|450190534|ref|ZP_21890893.1| pseudouridine kinase, partial [Escherichia coli SEPT362]
gi|449320512|gb|EMD10543.1| pseudouridine kinase, partial [Escherichia coli SEPT362]
Length = 314
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 36 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVLGENT 95
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 96 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 154
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 155 DNAA--NVPVFVDPVSAWKCVKVHDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 212
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 213 FH-----------------QHGLNRLVLSMGGDGV 230
>gi|383863039|ref|XP_003706990.1| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Megachile rotundata]
Length = 689
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 50/307 (16%)
Query: 6 GGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RNVA + LG + +IS +G D G ++ KS G + + + +++TA +
Sbjct: 387 GGVGRNVANALISLGLNSTRLISVVGNDQPGKAII---KSLGDGGQTVEQLSNMNTARCT 443
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D GE + +E + ++P+ I+++ + +AS +++D N+ + +A
Sbjct: 444 VIIDYQGECRFVIDEMEVLAS-ISPNLIKKYQSLVENASFIVLDGNIPLDTIRYVLDLAT 502
Query: 125 ECNIPVWFEPVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IPVW+EP + K+ ++ + + +SPN +EL ++ G+ + P+ NK
Sbjct: 503 YSKIPVWYEPTDIKKATKVFEAKSQWQNVLHFISPNRNEL-----SVIGKYLGIPVPENK 557
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+ + + +K I + + + +V+ TLGS GVL+ K L P F +
Sbjct: 558 LNMD--LEEVK-IIAEQVAEFVPVVISTLGSQGVLVVRKAL---------GNDP--FYDE 603
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL------PASVVRLTGAGDCLVGGTLA 294
K + + +SR +P L ++G GDCL G +
Sbjct: 604 GGKLIANTMINSRL----------------YPPLSYVSDDSNETFNVSGCGDCLTAGIIY 647
Query: 295 SISSGLD 301
I LD
Sbjct: 648 GIHKNLD 654
>gi|225350789|ref|ZP_03741812.1| hypothetical protein BIFPSEUDO_02359 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158245|gb|EEG71487.1| hypothetical protein BIFPSEUDO_02359 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 331
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 111/215 (51%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV +N+A+ M+ LG Y+I+ G D G L + ++ + + + ++
Sbjct: 48 GGVGQNIAQNMAHLGMPTYLITVYGDDENGKTLERSCAANNINLDYAAQLEGRRSSTYMF 107
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+L AV +E I K + P ++ + I+ A++ ++DANL P +A I
Sbjct: 108 ITDDTGDLLVAVNDME-ICKEINPAFLESRLDFINGAAICLLDANLEPETMAW---IGEH 163
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
P++ + VS K+ R +++ +TV+ PN+ E A+ L+G + +++SA +
Sbjct: 164 VTAPLFGDTVSTVKAHRFDTILNKMTVLKPNDLE----ASVLTGIGI-----ADQYSAGA 214
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+T LL++G++ V ++LG++G+L E
Sbjct: 215 AAKT-------LLDRGVKNVFISLGANGILCARHE 242
>gi|331653597|ref|ZP_08354598.1| putative kinase [Escherichia coli M718]
gi|331683842|ref|ZP_08384438.1| putative kinase [Escherichia coli H299]
gi|331048446|gb|EGI20522.1| putative kinase [Escherichia coli M718]
gi|331078794|gb|EGI49996.1| putative kinase [Escherichia coli H299]
Length = 313
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVLGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVHDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|170085119|ref|XP_001873783.1| indigoidine synthase A-like protein [Laccaria bicolor S238N-H82]
gi|164651335|gb|EDR15575.1| indigoidine synthase A-like protein [Laccaria bicolor S238N-H82]
Length = 775
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 145/340 (42%), Gaps = 38/340 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPY------MISALGLDMAGNILLEHWKSAGLSTEGIRR 54
V+ LGGVARN+AE ++ Y +I+ +G D G+ L++ + + T+G+ +
Sbjct: 402 VSMSLGGVARNIAEASHRIMEARYPDLSSLLIAPVGNDHFGDALVQEISNLRMRTDGLVK 461
Query: 55 QKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
D TAV + +L+ G L VA ++ I + D + + SV+ +D NLSP
Sbjct: 462 -TDKRTAVCNMVLNSGGALVGGVADMD-ITRTFNGDTVMLSCIQKHTPSVVALDGNLSPE 519
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKS-----------RRITSVVKYITVVSPNEDELVAM 163
++ A+ + I V FEP S KS RR S IT +PN EL +
Sbjct: 520 SITAAVDYCNQNGIAVLFEPTSAIKSASILPAISSFLRRDNSDGPPITFFTPNLLELTHL 579
Query: 164 ANALSGEN---MFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGS------DGV 214
A E M P N + +L + + L K + + + G+ G+
Sbjct: 580 YQATRSEEFDLMSHPAWWNVVDSLNLGSAFRTDLEQLARKPVDVDDSSKGNLSFLVDQGI 639
Query: 215 LLCSKELLSSMRIGLRKTKPYGF-------SRDLYKTVTSRCHSSRYSGAMEPAGGSQFF 267
LL + K G +D + +R S+ + + G ++
Sbjct: 640 AQMVVHLLPFFQHIFVKCGDRGVLVAMCIPEKDSLASAWARERSNPHKRYIVAHGKAKEI 699
Query: 268 AV--HFPALP-ASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
V HFPALP +V +TGAGD VG LAS++ MQ
Sbjct: 700 MVLQHFPALPIETVANVTGAGDSFVGALLASVAGEPGSMQ 739
>gi|417688669|ref|ZP_12337910.1| hypothetical protein SB521682_0922 [Shigella boydii 5216-82]
gi|332093216|gb|EGI98276.1| hypothetical protein SB521682_0922 [Shigella boydii 5216-82]
Length = 313
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S A A
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEAFAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSIGGDGV 229
>gi|218705697|ref|YP_002413216.1| hypothetical protein ECUMN_2502 [Escherichia coli UMN026]
gi|293405634|ref|ZP_06649626.1| hypothetical protein ECGG_00986 [Escherichia coli FVEC1412]
gi|298381316|ref|ZP_06990915.1| hypothetical protein ECFG_01045 [Escherichia coli FVEC1302]
gi|300897775|ref|ZP_07116168.1| kinase, PfkB family [Escherichia coli MS 198-1]
gi|331663668|ref|ZP_08364578.1| putative kinase [Escherichia coli TA143]
gi|417587161|ref|ZP_12237932.1| hypothetical protein ECSTECC16502_2798 [Escherichia coli
STEC_C165-02]
gi|419932808|ref|ZP_14450092.1| hypothetical protein EC5761_04465 [Escherichia coli 576-1]
gi|422334374|ref|ZP_16415381.1| pseudouridine kinase [Escherichia coli 4_1_47FAA]
gi|432354106|ref|ZP_19597379.1| pseudouridine kinase [Escherichia coli KTE2]
gi|432402458|ref|ZP_19645210.1| pseudouridine kinase [Escherichia coli KTE26]
gi|432426722|ref|ZP_19669223.1| pseudouridine kinase [Escherichia coli KTE181]
gi|432461188|ref|ZP_19703337.1| pseudouridine kinase [Escherichia coli KTE204]
gi|432476395|ref|ZP_19718394.1| pseudouridine kinase [Escherichia coli KTE208]
gi|432489843|ref|ZP_19731717.1| pseudouridine kinase [Escherichia coli KTE213]
gi|432518237|ref|ZP_19755425.1| pseudouridine kinase [Escherichia coli KTE228]
gi|432538358|ref|ZP_19775260.1| pseudouridine kinase [Escherichia coli KTE235]
gi|432631953|ref|ZP_19867879.1| pseudouridine kinase [Escherichia coli KTE80]
gi|432641667|ref|ZP_19877501.1| pseudouridine kinase [Escherichia coli KTE83]
gi|432666562|ref|ZP_19902143.1| pseudouridine kinase [Escherichia coli KTE116]
gi|432775251|ref|ZP_20009530.1| pseudouridine kinase [Escherichia coli KTE54]
gi|432839851|ref|ZP_20073337.1| pseudouridine kinase [Escherichia coli KTE140]
gi|432887148|ref|ZP_20101222.1| pseudouridine kinase [Escherichia coli KTE158]
gi|432913346|ref|ZP_20119043.1| pseudouridine kinase [Escherichia coli KTE190]
gi|433019235|ref|ZP_20207456.1| pseudouridine kinase [Escherichia coli KTE105]
gi|433053775|ref|ZP_20240955.1| pseudouridine kinase [Escherichia coli KTE122]
gi|433068480|ref|ZP_20255270.1| pseudouridine kinase [Escherichia coli KTE128]
gi|433159209|ref|ZP_20344047.1| pseudouridine kinase [Escherichia coli KTE177]
gi|433179022|ref|ZP_20363422.1| pseudouridine kinase [Escherichia coli KTE82]
gi|433203784|ref|ZP_20387560.1| pseudouridine kinase [Escherichia coli KTE95]
gi|218432794|emb|CAR13688.1| putative kinase [Escherichia coli UMN026]
gi|291427842|gb|EFF00869.1| hypothetical protein ECGG_00986 [Escherichia coli FVEC1412]
gi|298278758|gb|EFI20272.1| hypothetical protein ECFG_01045 [Escherichia coli FVEC1302]
gi|300358490|gb|EFJ74360.1| kinase, PfkB family [Escherichia coli MS 198-1]
gi|331059467|gb|EGI31444.1| putative kinase [Escherichia coli TA143]
gi|345336789|gb|EGW69223.1| hypothetical protein ECSTECC16502_2798 [Escherichia coli
STEC_C165-02]
gi|373244600|gb|EHP64081.1| pseudouridine kinase [Escherichia coli 4_1_47FAA]
gi|388415591|gb|EIL75514.1| hypothetical protein EC5761_04465 [Escherichia coli 576-1]
gi|430875279|gb|ELB98821.1| pseudouridine kinase [Escherichia coli KTE2]
gi|430924929|gb|ELC45602.1| pseudouridine kinase [Escherichia coli KTE26]
gi|430955654|gb|ELC74436.1| pseudouridine kinase [Escherichia coli KTE181]
gi|430988878|gb|ELD05347.1| pseudouridine kinase [Escherichia coli KTE204]
gi|431005563|gb|ELD20584.1| pseudouridine kinase [Escherichia coli KTE208]
gi|431020460|gb|ELD33805.1| pseudouridine kinase [Escherichia coli KTE213]
gi|431050859|gb|ELD60535.1| pseudouridine kinase [Escherichia coli KTE228]
gi|431069247|gb|ELD77576.1| pseudouridine kinase [Escherichia coli KTE235]
gi|431170153|gb|ELE70347.1| pseudouridine kinase [Escherichia coli KTE80]
gi|431181550|gb|ELE81412.1| pseudouridine kinase [Escherichia coli KTE83]
gi|431200856|gb|ELE99574.1| pseudouridine kinase [Escherichia coli KTE116]
gi|431318290|gb|ELG06056.1| pseudouridine kinase [Escherichia coli KTE54]
gi|431389024|gb|ELG72739.1| pseudouridine kinase [Escherichia coli KTE140]
gi|431416146|gb|ELG98633.1| pseudouridine kinase [Escherichia coli KTE158]
gi|431439646|gb|ELH20979.1| pseudouridine kinase [Escherichia coli KTE190]
gi|431531136|gb|ELI07805.1| pseudouridine kinase [Escherichia coli KTE105]
gi|431570175|gb|ELI43101.1| pseudouridine kinase [Escherichia coli KTE122]
gi|431584107|gb|ELI56094.1| pseudouridine kinase [Escherichia coli KTE128]
gi|431677848|gb|ELJ43861.1| pseudouridine kinase [Escherichia coli KTE177]
gi|431701387|gb|ELJ66306.1| pseudouridine kinase [Escherichia coli KTE82]
gi|431721333|gb|ELJ85328.1| pseudouridine kinase [Escherichia coli KTE95]
Length = 313
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKSWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +V+++G DGV
Sbjct: 212 FH-----------------QHGLNRLVMSMGGDGV 229
>gi|417122275|ref|ZP_11971533.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0246]
gi|386147555|gb|EIG93995.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0246]
Length = 313
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K ++++A+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLTAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSFLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|444379572|ref|ZP_21178749.1| Pseudouridine kinase [Enterovibrio sp. AK16]
gi|443676301|gb|ELT83005.1| Pseudouridine kinase [Enterovibrio sp. AK16]
Length = 363
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG +IS +G D GN++LE + AG+ + + + T+ +
Sbjct: 93 GGVGRNIAENLARLGVDTKLISVVGDDAYGNVVLEATRKAGVDVKAVSQLTGQTTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA-ASCKIAA 124
+LD +G++ AAV+ + SI L + Q I A+ +++D NL+ LA K
Sbjct: 153 LLDAHGDMLAAVSDM-SILDHLNIGLLAQHTDLIQHAAAIIIDTNLNDDVLAYLFSKFHD 211
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ ++ + VS KS + +K+I + PN E A +SG P++ +
Sbjct: 212 QV---IYLDTVSTAKSIKAKPYLKHIHTLKPNLLE----AETISG----LPLNSD----- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
+ + +++GI + L+LG+DG+L S E + +R
Sbjct: 256 ---EDIDDIADWFIQQGITRLFLSLGADGILYRSAEDTALIR 294
>gi|262037119|ref|ZP_06010612.1| kinase, PfkB family [Leptotrichia goodfellowii F0264]
gi|261748850|gb|EEY36196.1| kinase, PfkB family [Leptotrichia goodfellowii F0264]
Length = 363
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV +N+AE ++KLG ++ALG D+ G + E+ + L K+ T++
Sbjct: 92 FGGVGKNIAENINKLGINSKFVTALGDDIYGKNIKEYLNNQNLDISDSLFLKNQQTSMYV 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+IL+ + E+ AV+S + I K +TP+++ I++A +L++D NL AL +
Sbjct: 152 SILNDDKEMEMAVSSTD-ICKNITPEFLETIRKKITNAKLLVLDTNLEEEALRYIAFLRR 210
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ N+ + VS KS ++ + + PN+ E A LSG ++ D
Sbjct: 211 KPNL--ILDTVSTKKSLKVKEFIGRFHTIKPNKLE----AEILSGITIYSNDD------- 257
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227
L+ A L KG++ V+++LG+ GV +++ ++I
Sbjct: 258 -----LERAGEYFLHKGVKKVLISLGAKGVFYMTQDKQGIIKI 295
>gi|417624058|ref|ZP_12274357.1| hypothetical protein ECSTECH18_2812 [Escherichia coli STEC_H.1.8]
gi|345377019|gb|EGX08951.1| hypothetical protein ECSTECH18_2812 [Escherichia coli STEC_H.1.8]
Length = 313
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTQKPNRLEAETLSGIALSGRGDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|195032818|ref|XP_001988567.1| GH11233 [Drosophila grimshawi]
gi|193904567|gb|EDW03434.1| GH11233 [Drosophila grimshawi]
Length = 694
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID----TA 61
GGV RN+AE + KL +ISA+G D G++L + +A ++R +D T+
Sbjct: 378 GGVGRNIAEGIYKLYGAVNLISAVGSDQLGHMLRQLMPAA------LQRSLIVDETHATS 431
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ S + D +G+ + +E + +TP+ + S A ++++D N+S A+A + +
Sbjct: 432 LCSLVFDQSGDCKLILGDME-VHDSITPEVLATQSDLFSDAPLIVMDCNISEQAMACTLQ 490
Query: 122 IAAECNIPVWFEPVSVT---KSRRIT-SVVKYITVVSPNEDELVAMANALSGENM-FRPI 176
+A + +PV+FEP + K +++ + + I ++ PN EL + ++G+++ ++P
Sbjct: 491 LAQKFQVPVFFEPTDMYIAGKPFKLSPDLTQNIRLLKPNMHELKTIVETITGQHVAWQP- 549
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
N A S +L +EK ++ TLG GVLL
Sbjct: 550 --NTKVARSQLLEQAKQLLQQIEKHFNCIIATLGDHGVLL 587
>gi|300935091|ref|ZP_07150122.1| kinase, PfkB family [Escherichia coli MS 21-1]
gi|415840652|ref|ZP_11522080.1| hypothetical protein ECRN5871_3866 [Escherichia coli RN587/1]
gi|417282225|ref|ZP_12069525.1| carbohydrate kinase, PfkB family [Escherichia coli 3003]
gi|425278461|ref|ZP_18669707.1| pseudouridine kinase [Escherichia coli ARS4.2123]
gi|432680777|ref|ZP_19916151.1| pseudouridine kinase [Escherichia coli KTE143]
gi|300459672|gb|EFK23165.1| kinase, PfkB family [Escherichia coli MS 21-1]
gi|323188109|gb|EFZ73404.1| hypothetical protein ECRN5871_3866 [Escherichia coli RN587/1]
gi|386246554|gb|EII88284.1| carbohydrate kinase, PfkB family [Escherichia coli 3003]
gi|408201920|gb|EKI27054.1| pseudouridine kinase [Escherichia coli ARS4.2123]
gi|431220174|gb|ELF17554.1| pseudouridine kinase [Escherichia coli KTE143]
Length = 313
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG++ +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNRAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|432534439|ref|ZP_19771415.1| pseudouridine kinase [Escherichia coli KTE234]
gi|431060666|gb|ELD69992.1| pseudouridine kinase [Escherichia coli KTE234]
Length = 313
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVNPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|419081371|ref|ZP_13626819.1| pseudouridine kinase [Escherichia coli DEC4A]
gi|420270835|ref|ZP_14773193.1| pseudouridine kinase [Escherichia coli PA22]
gi|421813087|ref|ZP_16248811.1| pseudouridine kinase [Escherichia coli 8.0416]
gi|377926001|gb|EHU89936.1| pseudouridine kinase [Escherichia coli DEC4A]
gi|390714347|gb|EIN87261.1| pseudouridine kinase [Escherichia coli PA22]
gi|408601393|gb|EKK75196.1| pseudouridine kinase [Escherichia coli 8.0416]
Length = 313
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T+ +
Sbjct: 40 GGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLS 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA AA
Sbjct: 100 LLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAA- 157
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRNKHSAE 184
N+PV+ +PVS K ++ + I + PN E ++ ALSG + H
Sbjct: 158 -NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFH--- 213
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ G+ +VL++G DGV
Sbjct: 214 --------------QHGLNRLVLSMGGDGV 229
>gi|392571416|gb|EIW64588.1| indigoidine synthase A-like protein [Trametes versicolor FP-101664
SS1]
Length = 793
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 144/350 (41%), Gaps = 65/350 (18%)
Query: 1 VNYVLGGVARNVAECMSK--------LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ GGV RNVAE + L S ++S +G D G LL K AG+ T+G+
Sbjct: 413 VSLTAGGVGRNVAEAAHRILTSHSKDLSSSAVLVSPVGEDAFGQWLLSETKQAGMRTDGL 472
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
R TAV + +LD G L VA +E+I I H +V+ +DAN+S
Sbjct: 473 IRVPGARTAVCNMVLDSAGGLTGGVADMEAIRTLDATKIIEVLDKH--QPAVIALDANMS 530
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-----------ITVVSPNEDELV 161
L + A + NI +FEP SV KS I + +T +PN EL
Sbjct: 531 HETLKSLVTYANKRNIRTFFEPTSVPKSTSIFPALAAALDTASIPRAPVTFATPNVLELA 590
Query: 162 AM--------------------ANALSGENMFRPIDRNKHSAESLFQTLKPA---ILVLL 198
M + ++ ++FR ++ ++ + S F P+ + L+
Sbjct: 591 HMYQEACASPLELTAHKYWWRVVDEMALGSLFR-MELDQLARRSAFAGSGPSTSTLAFLV 649
Query: 199 EKGIRLVVLTL---GSDGVLLCSKE-LLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSS-- 252
+ GI + + L V+ C + L+++ R+ D HS+
Sbjct: 650 DNGIAQMAINLLPFFQHLVIKCGERGLIAAFRVS---------GEDAVAASAWATHSTNI 700
Query: 253 --RYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASIS 297
R A G S HFP + +V +TGAGD LVG LA+++
Sbjct: 701 PARQIVARSANGKSVVVFKHFPPIQVPEDKIVNVTGAGDSLVGAMLATLT 750
>gi|300950072|ref|ZP_07164019.1| kinase, PfkB family [Escherichia coli MS 116-1]
gi|300450562|gb|EFK14182.1| kinase, PfkB family [Escherichia coli MS 116-1]
Length = 313
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
A N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNVA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|432737680|ref|ZP_19972439.1| pseudouridine kinase [Escherichia coli KTE42]
gi|431282573|gb|ELF73453.1| pseudouridine kinase [Escherichia coli KTE42]
Length = 313
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL +G DGV
Sbjct: 212 FH-----------------QHGLNRLVLGMGGDGV 229
>gi|164688058|ref|ZP_02212086.1| hypothetical protein CLOBAR_01703 [Clostridium bartlettii DSM
16795]
gi|164602471|gb|EDQ95936.1| putative phosphomethylpyrimidine kinase [Clostridium bartlettii DSM
16795]
Length = 318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AECM+++G IS LG D G +L+H K + E + T
Sbjct: 40 FGGVCRNIAECMARVGVNTKFISVLGDDETGKSILQHSKEMNYNMEDSLIVEGGHTPTYM 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD GE+ +AV ++ I+KF T ++I I ++ +++D++ P +
Sbjct: 100 AVLDHFGEMMSAVVDMKIIDKF-TTEFIDSKADIIKNSKYMVLDSD--RPDIVEHILKNF 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K++ +T +VKY + PN E M F+ + N
Sbjct: 157 TNDTKFILDPVSAAKAKTVTHLVKYFHTIKPNRYEAEIMCG-------FKIKNEND---- 205
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
L+ A + G++ V +TL DG+
Sbjct: 206 -----LRKAGKYFTDLGVKNVFITLDEDGI 230
>gi|449551151|gb|EMD42115.1| hypothetical protein CERSUDRAFT_147657 [Ceriporiopsis subvermispora
B]
Length = 801
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 157/364 (43%), Gaps = 66/364 (18%)
Query: 1 VNYVLGGVARNVAECMSKL--------GSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGVARNVAE ++ +IS LG D GN+L+ + G+ T+G
Sbjct: 418 VSLSLGGVARNVAEAAHRILTAHSQGQSGDTLLISPLGNDSFGNLLVSETERIGMRTDGF 477
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
R + +AV + +LD G L VA ++ I + ++ ++ +DANL+
Sbjct: 478 VRTEGGRSAVCNMVLDTQGSLIGGVADMDIIHSLEVQTVLASL--QSNAPKLVALDANLT 535
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKS-----------RRITSVVKYITVVSPNEDELV 161
P L++ + NI V FEP SV KS +T +T +PN EL
Sbjct: 536 PKTLSSLLGHCIQHNIDVLFEPTSVVKSTVVLPAIAAAMNSMTLTRTPVTYATPNLLELA 595
Query: 162 -----AMANAL---SGENMFRPID------RNKHSAESLFQ-------TLKPAILVLLEK 200
A A L S N ++ ID + + E L + + K + L+EK
Sbjct: 596 RIYQEAHAGPLELTSHANWWKVIDSMSLGTQYRTDLELLARRDACDDDSTKGTLSFLVEK 655
Query: 201 GIRLV---VLTLGSDGVLLC-SKELLSSMRIGLRKTKPYGFSRDLYKTVTSRC---HSSR 253
GI + +L ++ C + ++++ RI + +S++ + +RC H
Sbjct: 656 GIAQMAVHLLPFFQHLIIKCGDRGIIAAFRIPGTRASSSAWSQE-RSNIHARCVVAHGKP 714
Query: 254 YSGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310
+G + H PA S +V +TGAGD LVG LA++ V Q A +D
Sbjct: 715 GTGVL--------VLKHVPAFRLSDQDIVNVTGAGDSLVGSILATL-----VRQPAAFED 761
Query: 311 AKTV 314
+ +
Sbjct: 762 PEAL 765
>gi|421725097|ref|ZP_16164297.1| pseudouridine kinase [Klebsiella oxytoca M5al]
gi|410374095|gb|EKP28776.1| pseudouridine kinase [Klebsiella oxytoca M5al]
Length = 317
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 23/222 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G+ LL+ +G+ + + T
Sbjct: 41 IKYTPGGVGRNIAQNIALLNKTAWLLSVVGDDFYGHSLLKQTAQSGVHVDKCQIIPGEGT 100
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP ++RQ I A+V++VD N+S ALA
Sbjct: 101 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLRQHQDFICGAAVIVVDCNISESALAWLM 159
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSG-ENMFRPIDR 178
+ + I V +PVS K +I+ + I + PN E ++ ALSG +++ R D
Sbjct: 160 ENSGSTLIFV--DPVSAWKCVKISQHLGRIHTLKPNRIEAETLSGIALSGTDDVARVADW 217
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
H G++ +VL++G DGV ++
Sbjct: 218 FHH------------------HGLKRLVLSMGGDGVYYSERD 241
>gi|432392680|ref|ZP_19635510.1| pseudouridine kinase [Escherichia coli KTE21]
gi|430917836|gb|ELC38875.1| pseudouridine kinase [Escherichia coli KTE21]
Length = 313
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLMSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAIVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|296414402|ref|XP_002836890.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632732|emb|CAZ81081.1| unnamed protein product [Tuber melanosporum]
Length = 765
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 137/328 (41%), Gaps = 65/328 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV +NVA G+ ++SA+G D+AG LE ++ G+ G+++ ID V +
Sbjct: 426 LGGVGKNVALAAHLAGANARLVSAVGKDLAGTWALERLQALGMDISGVKK---IDGGVTA 482
Query: 65 NILDVN---GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ +N GEL A A + E R I V+ VD NLS LA +
Sbjct: 483 RYVAINNSSGELFVAGADMRVFESAEMGTLARGAI--AKGVKVVCVDGNLSVEGLAGVVR 540
Query: 122 IAAECNIPVWFEPVSVTKSRRITS-------VVKYITVVSPNEDELVAM-ANA-----LS 168
AA +IP+ FEP S +KS RI S +++ +PN EL AM A+A
Sbjct: 541 AAAGLDIPLAFEPTSPSKSTRILSPTLPIYPSTSTVSLTTPNTHELTAMFAHAREIGMFE 600
Query: 169 GENMFRPI-DRNKHSAESLFQTLKPAILV--LLEKGI-----------RLVVLTLGSDGV 214
E+ +R + D N S F T P L LLE GI +++ LG DGV
Sbjct: 601 REDWWRVVCDINIDSI--YFNTQLPTRLSTNLLEGGIIQSAVHLSPYFSGIMVKLGVDGV 658
Query: 215 LLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV---HF 271
+L L TS ++ G + G V HF
Sbjct: 659 VLV----------------------QLLPLATSFTSAALPPGTIASQGAGSVAGVMVRHF 696
Query: 272 PALPAS---VVRLTGAGDCLVGGTLASI 296
PA S ++ + G GD +G LA +
Sbjct: 697 PAEVISQENIISVNGVGDTYLGVVLAGL 724
>gi|270157935|ref|ZP_06186592.1| pfkB family kinase [Legionella longbeachae D-4968]
gi|289163794|ref|YP_003453932.1| carbohydrate kinase, pfkB family [Legionella longbeachae NSW150]
gi|269989960|gb|EEZ96214.1| pfkB family kinase [Legionella longbeachae D-4968]
gi|288856967|emb|CBJ10781.1| putative carbohydrate kinase, pfkB family [Legionella longbeachae
NSW150]
Length = 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 72/306 (23%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVA NVA+ ++ L + + SA+G D G + H K+ G++ + I TA
Sbjct: 36 FGGVAHNVAKNLALLTNNIHFCSAVGDDQDGIDVQTHLKNLGIAIKNILTIPQQKTAHYD 95
Query: 65 NILDVNGELAAAVASVESIEKF----LTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+LD GEL A+A +E E T W ++ H ++ +D NL P +
Sbjct: 96 VLLDHEGELYIALADMEIFEHIPFQKFTQTW-EEWNH----GDIVFLDTNLPEPIIDHVV 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
I NI + +PVSV K+++++S ++++ ++ P+ E + N+
Sbjct: 151 NIGRTQNIRLCIDPVSVVKAKKLSSCLEHVFLLKPDRYEAETLTNS-------------- 196
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
S S+ +K A +LL+KG+ +++LG G ++ ++++
Sbjct: 197 -SIHSISDCIK-AGQILLDKGVEHCIISLGKFGYVIVNEKIQQ----------------- 237
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISSG 299
HFP+ SVV ++GAGD + G L +
Sbjct: 238 -----------------------------HFPSFFIESVVDVSGAGDAFLAGVLYELKQE 268
Query: 300 LDVMQS 305
++++
Sbjct: 269 TSILEA 274
>gi|432771129|ref|ZP_20005468.1| pseudouridine kinase [Escherichia coli KTE50]
gi|432962335|ref|ZP_20151988.1| pseudouridine kinase [Escherichia coli KTE202]
gi|433063629|ref|ZP_20250552.1| pseudouridine kinase [Escherichia coli KTE125]
gi|431314826|gb|ELG02758.1| pseudouridine kinase [Escherichia coli KTE50]
gi|431474126|gb|ELH53948.1| pseudouridine kinase [Escherichia coli KTE202]
gi|431581623|gb|ELI54070.1| pseudouridine kinase [Escherichia coli KTE125]
Length = 313
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKVWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +V+++G DGV
Sbjct: 212 FH-----------------QHGLNRLVMSMGGDGV 229
>gi|167771703|ref|ZP_02443756.1| hypothetical protein ANACOL_03075 [Anaerotruncus colihominis DSM
17241]
gi|167666343|gb|EDS10473.1| HTH domain protein [Anaerotruncus colihominis DSM 17241]
Length = 367
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A ++ LG ISA G D L E + G+ T+
Sbjct: 94 GGVARNIAHNLALLGEDVKFISAFGEDAHAAQLAEGCRRVGMDISNSLTVPGGVTSTYMF 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D +G++ A+A ++ I +TP ++ I I+ AS+ +VD NLS +L +A
Sbjct: 154 ITDEHGDMMLAIADMD-IYNQITPKFLETKIDFINRASLCIVDTNLSSESLR---YLAEN 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
C P++ + VS TK++++ ++ +I + PN+ E A L+G I+ S
Sbjct: 210 CRCPLFADTVSTTKAKKLAGLLYHIHTLKPNKLE----AQLLTG------IEITDES--- 256
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+L+ A LL+ G+ V ++LG DGV
Sbjct: 257 ---SLRRAAKKLLDMGLEQVFISLGGDGVF 283
>gi|432806327|ref|ZP_20040255.1| pseudouridine kinase [Escherichia coli KTE91]
gi|432934961|ref|ZP_20134398.1| pseudouridine kinase [Escherichia coli KTE184]
gi|433194248|ref|ZP_20378238.1| pseudouridine kinase [Escherichia coli KTE90]
gi|431354469|gb|ELG41195.1| pseudouridine kinase [Escherichia coli KTE91]
gi|431453129|gb|ELH33539.1| pseudouridine kinase [Escherichia coli KTE184]
gi|431715698|gb|ELJ79843.1| pseudouridine kinase [Escherichia coli KTE90]
Length = 313
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G L +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSQLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|195470298|ref|XP_002087445.1| GE16913 [Drosophila yakuba]
gi|194173546|gb|EDW87157.1| GE16913 [Drosophila yakuba]
Length = 700
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 141/310 (45%), Gaps = 43/310 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNFISAVGNDQMGQTLLQMMPKA--LQRGLILADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHHQLFREAPLIVMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
IPV+FEP + + + + K I ++ PN EL + A++GE + D +
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNLQELKTITEAITGETVTWNPDTKQP 559
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRIGLRKTKPYGFS 238
AE + Q +++ ++ ++ TL GVLL + E + + + + KT P
Sbjct: 560 QAELVHQA--KSLIKKIDCHFNCILATLSDHGVLLSYRGDAEHDARLLLDVSKTTPP--- 614
Query: 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASIS 297
H +R+ +PA + ++V ++GAGD G + ++
Sbjct: 615 -----------HCTRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALL 647
Query: 298 SGLDVMQSVA 307
G + + +A
Sbjct: 648 RGRTLDECIA 657
>gi|425380199|ref|ZP_18764239.1| pseudouridine kinase [Escherichia coli EC1865]
gi|408296566|gb|EKJ14792.1| pseudouridine kinase [Escherichia coli EC1865]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+ +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNNAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRGDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|421846529|ref|ZP_16279676.1| pseudouridine kinase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411772123|gb|EKS55761.1| pseudouridine kinase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTAVGNDFYGQSLLAQTNQSGVHVDKCLIVSGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + ++ +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHISAEFLSQHFDFIRQAKVIIADCNISEDALAWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ A + +PV+ +PVS K +I + I + PN E ++ ALSG + +
Sbjct: 154 ENAGD--VPVFVDPVSAWKCVKIRGRLAKIHTLKPNRLEAETLSGIALSGRDDVSKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H ++G+ +VL++G DGV
Sbjct: 212 FH-----------------DRGLNRLVLSMGGDGV 229
>gi|311278855|ref|YP_003941086.1| PfkB domain-containing protein [Enterobacter cloacae SCF1]
gi|308748050|gb|ADO47802.1| PfkB domain protein [Enterobacter cloacae SCF1]
Length = 364
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A +++LG ++ISA+G D G LLE + AG++ + R +TA +
Sbjct: 93 GGVARNIAHNLAQLGRDVHLISAVGSDFYGETLLEQTRQAGVNVQSCIRLHGQNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ I LTP + Q ++ A V++VD NL+ AL A
Sbjct: 153 IANPQEETVLAINDTH-ILSSLTPQLLNQSRDLLAHAGVVLVDCNLTEQALEWVFTQAQA 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
PV+ + VS K+ +I + I + P EL L G+ + DR
Sbjct: 212 HAAPVFVDTVSEFKAHKIRPWLSRIHTLKPTRQEL----QILWGQPVVSEEDR------- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
A+ L E+G + VV+ L D V CS
Sbjct: 261 -----LAAVQWLHERGTQRVVVCLDDDAV-FCS 287
>gi|425301006|ref|ZP_18690904.1| pseudouridine kinase [Escherichia coli 07798]
gi|408213392|gb|EKI37877.1| pseudouridine kinase [Escherichia coli 07798]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG++ +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNRAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDMNIINA-ITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|336387836|gb|EGO28980.1| hypothetical protein SERLADRAFT_444897 [Serpula lacrymans var.
lacrymans S7.9]
Length = 779
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 60/353 (16%)
Query: 1 VNYVLGGVARNVAECMSK--------LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGV RN++E + L S ++S +G D G +L++ + G+ T+G+
Sbjct: 398 VSISLGGVGRNISEAAHRIMSSQSPDLSSATMLMSPVGSDPFGRLLMDETRMLGMRTDGL 457
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ +AV + ++D +G L VA ++ I L D + +++ + VL VD NLS
Sbjct: 458 IANDEESSAVCNMLVDASGNLKEGVADMD-ITCSLDGDMVVRYLETYT-PKVLAVDGNLS 515
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--------ITVVSPNEDELVAMA 164
L ++ + ++FEP SV KS I S + +T SPN EL +
Sbjct: 516 ETTLTTLVDYCSQKKLDIFFEPTSVMKSTNILSAIAEVKDLTRSPVTFASPNILELCRIY 575
Query: 165 NA--------LSGENMFRPID------RNKHSAESLFQT-------LKPAILVLLEKGIR 203
+ +S E +R ID + E L + + + L+ +GI
Sbjct: 576 HEVRSPSWDLMSSEAWWRVIDGFGLGSAFRMDLEKLARMDVSKDDPRQGTLSFLISEGIA 635
Query: 204 LVVLTL---GSDGVLLCSKE-LLSSMRIG--LRKTKPYGFSRDLY--KTVTSRCHSSRYS 255
+ + L V+ C + ++ +MR+ + +T P+ + + + + V +R SSR
Sbjct: 636 QMAINLLPFFEKLVIKCGERGVIVAMRLSGHVVETLPWISATNSFDARRVIARSMSSREM 695
Query: 256 GAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
++ HFPAL +S++ +TGAGD LVG LA++ S +S
Sbjct: 696 VVLQ----------HFPALHIDKSSIINVTGAGDSLVGSLLATLVSNPKAFES 738
>gi|455644523|gb|EMF23623.1| pseudouridine kinase [Citrobacter freundii GTC 09479]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTAVGNDFYGQSLLAQTNQSGVHVDKCLIVSGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + ++ +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHISAEFLSQHFDFIRQAKVIIADCNISEDALAWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ A + +PV+ +PVS K +I + I + PN E ++ ALSG + +
Sbjct: 154 ENAGD--VPVFVDPVSAWKCVKIRGRLAKIHTLKPNRLEAETLSGIALSGRDDVSKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H ++G+ +VL++G DGV
Sbjct: 212 FH-----------------DRGLNRLVLSMGGDGV 229
>gi|395334398|gb|EJF66774.1| indigoidine synthase A-like protein [Dichomitus squalens LYAD-421
SS1]
Length = 791
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 145/361 (40%), Gaps = 73/361 (20%)
Query: 1 VNYVLGGVARNVAECMSK--------LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ GGV RNVAE + L ++S +G D G +L+ + G+ T+G+
Sbjct: 409 VSLTSGGVGRNVAEAAYRILSSFSKDLAHSAVLVSPIGEDAFGQLLVSESERIGMRTDGL 468
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
R D TAV + +LD GEL VA ++ I I + S+L +DAN+S
Sbjct: 469 IRVPDARTAVCNMVLDSAGELTGGVADMDVIRTLDAAKVIE--VLDKQKPSLLALDANMS 526
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRI-----------TSVVKYITVVSPNEDELV 161
P + + A + NI +FEP SV KS I + +T +PN EL
Sbjct: 527 PETMKSLLTYATKRNISTFFEPTSVPKSTTIFPAIAASLSSASLSHAPVTFATPNVLELA 586
Query: 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAIL-------------------------- 195
M E P++ H + +Q + L
Sbjct: 587 HMYQ----EACASPLELTAH--KYWWQVIDDMTLGSEFRMELEQLARRQAFEDEAVTGNL 640
Query: 196 -VLLEKGIRLVVLTL---GSDGVLLCSKE-LLSSMRIGLRKTKPYGF---SRDLYKTVTS 247
L+E GI + + L ++ C + L+++ RI + + + S ++Y
Sbjct: 641 SFLVENGIAQMTINLLPFFQHLIIKCGERGLIAAFRISGEQAQSSAWANQSSNVY----- 695
Query: 248 RCHSSRYSGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGDCLVGGTLASISSGLDVMQ 304
+R A G HFP + + +V +TGAGD LVG LA++S + +
Sbjct: 696 ----ARQVVAHNRTGSHIVVFKHFPPIRVAAEKIVNVTGAGDSLVGSMLATLSQAPNAFE 751
Query: 305 S 305
S
Sbjct: 752 S 752
>gi|24113553|ref|NP_708063.1| pseudouridine kinase [Shigella flexneri 2a str. 301]
gi|30063607|ref|NP_837778.1| hypothetical protein S2380 [Shigella flexneri 2a str. 2457T]
gi|384543832|ref|YP_005727895.1| putative Sugar kinase, ribokinase family [Shigella flexneri
2002017]
gi|415853298|ref|ZP_11529307.1| uncharacterized sugar kinase yeiC [Shigella flexneri 2a str. 2457T]
gi|417723850|ref|ZP_12372655.1| hypothetical protein SFK304_2963 [Shigella flexneri K-304]
gi|417729082|ref|ZP_12377780.1| hypothetical protein SFK671_2747 [Shigella flexneri K-671]
gi|417734134|ref|ZP_12382785.1| hypothetical protein SF274771_2669 [Shigella flexneri 2747-71]
gi|417744035|ref|ZP_12392561.1| pseudouridine kinase [Shigella flexneri 2930-71]
gi|420340985|ref|ZP_14842494.1| pseudouridine kinase [Shigella flexneri K-404]
gi|24052601|gb|AAN43770.1| putative kinase [Shigella flexneri 2a str. 301]
gi|30041860|gb|AAP17587.1| putative kinase [Shigella flexneri 2a str. 2457T]
gi|281601618|gb|ADA74602.1| putative Sugar kinase, ribokinase family [Shigella flexneri
2002017]
gi|313651275|gb|EFS15673.1| uncharacterized sugar kinase yeiC [Shigella flexneri 2a str. 2457T]
gi|332755207|gb|EGJ85571.1| hypothetical protein SFK671_2747 [Shigella flexneri K-671]
gi|332756208|gb|EGJ86559.1| hypothetical protein SF274771_2669 [Shigella flexneri 2747-71]
gi|332765976|gb|EGJ96186.1| pseudouridine kinase [Shigella flexneri 2930-71]
gi|333016708|gb|EGK36037.1| hypothetical protein SFK304_2963 [Shigella flexneri K-304]
gi|391271515|gb|EIQ30389.1| pseudouridine kinase [Shigella flexneri K-404]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + + PN E ++ ALSG + +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQNHTLKPNRLEAETLSGIALSGRDDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|395230559|ref|ZP_10408863.1| pseudouridine kinase [Citrobacter sp. A1]
gi|424731380|ref|ZP_18159964.1| pseudouridine kinase [Citrobacter sp. L17]
gi|394715944|gb|EJF21729.1| pseudouridine kinase [Citrobacter sp. A1]
gi|422894031|gb|EKU33846.1| pseudouridine kinase [Citrobacter sp. L17]
Length = 313
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTAVGNDFYGQSLLAQTNQSGVHVDKCLIVSGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + ++ +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHISAEFLSQHFDFIRQAKVIIADCNISEDALAWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ A + +PV+ +PVS K +I I + PN E ++ ALSG + +
Sbjct: 154 ENAGD--VPVFVDPVSAWKCVKIRGRFAKIHTLKPNRLEAETLSGIALSGRDDVSKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H ++G+ +VL++G DGV
Sbjct: 212 FH-----------------DRGLNRLVLSMGGDGV 229
>gi|294876008|ref|XP_002767507.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869167|gb|EER00225.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 693
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 135/304 (44%), Gaps = 50/304 (16%)
Query: 8 VARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNIL 67
V ++AE M+ LG+ P +S +G D G + G+ T ++ T + +L
Sbjct: 365 VGLSLAESMAMLGATPVYLS-VGRDSHGKP-----DAIGVPTTNVKELTSESTGTCTLVL 418
Query: 68 DVNGELAAAVASVESIEKFL-----TPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
D GEL + VA+++ ++ + P +RQ +S VL+VDAN+ + + K
Sbjct: 419 DGRGELISGVAAMDIFDRLVHPLINIPQVLRQ--EDMSQLRVLLVDANIPRDTIVRASKA 476
Query: 123 AAECNIPVWFEPVSVTK-SRRI-------TSVVKYITVVSPNEDELVAMANA--LSGENM 172
+ W +PVS K + R+ ++ + VVSPN EL +A++ +
Sbjct: 477 CRARGVECWLDPVSTVKAASRVGKASDTGEELLDTVDVVSPNMRELAVLASSYLYPAQIE 536
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232
P+ + E + L A L+L +R V+ + G GV+L +KE L+
Sbjct: 537 VEPLRKE----EVIQWGLTTATLLLERSSVRRVLASFGKRGVILVTKEALTP-------- 584
Query: 233 KPYGFSRDLYKTVTSRCHSSRYSGAME----PAGGSQFFAVHFPALPA-SVVRLTGAGDC 287
L +++ C S G ++ P S AVH+ A P S+V TGAGD
Sbjct: 585 --------LPSSISPLCRS--IGGTLQIKALPTTSSSITAVHYAAEPVDSMVSSTGAGDN 634
Query: 288 LVGG 291
L+ G
Sbjct: 635 LLAG 638
>gi|302697695|ref|XP_003038526.1| hypothetical protein SCHCODRAFT_80706 [Schizophyllum commune H4-8]
gi|300112223|gb|EFJ03624.1| hypothetical protein SCHCODRAFT_80706 [Schizophyllum commune H4-8]
Length = 744
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 146/342 (42%), Gaps = 50/342 (14%)
Query: 5 LGGVARNVAECMSKLGSKPY---MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
LGGVARN+AE + + P +++ G D G +L + +S G+ ++G+ Q TA
Sbjct: 379 LGGVARNIAEAAHRCSADPQSTLLVAPHGADPFGTLLKDGTQSVGMRSDGL-MQTTGSTA 437
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
V S +LD G L + VA+++ F + Q H +V+ +D NLSP L A +
Sbjct: 438 VCSLMLDGTGNLVSGVAAMDITRDFEADTVVEQIEKH--KPNVVALDGNLSPETLTAVVR 495
Query: 122 IAAECNIPVWFEPVSVTKSRRI----------TSVVKYITVVSPNEDELVAM-ANALSGE 170
+ I EP S+TKS I T V +T +PN EL M A++G+
Sbjct: 496 YCYKHGIKS-TEPTSLTKSTAILSAAFDCLPPTGGVAPVTFATPNLIELEHMYRTAVAGD 554
Query: 171 NMFRPIDRNKHSA-----ESLFQTLKPAILVLLEKGIRLVVLTLGSD------------G 213
P D H ++L L A + +E+ R G D G
Sbjct: 555 ----PFDAMSHKGWWATLDTL--ALNDAFRMDIEQLSRQPAFDAGGDESLGKLTFLRERG 608
Query: 214 VLLCSKELLSSMRIGLRKTKPYG---FSRDLYKTVTSRCHSSRYS--GAMEPAGG---SQ 265
V + LL + K P G R K TS + R + G A G ++
Sbjct: 609 VAQMAINLLPFFEHLIVKLGPRGALVAMRLDDKMGTSGWANERSNPRGRYIVAHGRDSAK 668
Query: 266 FFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSGLDVMQSV 306
+HFPALPA +V TGAGD VG L+ I D + V
Sbjct: 669 VVLMHFPALPAPGIVNTTGAGDTFVGSFLSGIVVKPDATRDV 710
>gi|167378249|ref|XP_001734734.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903644|gb|EDR29101.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 689
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 57/296 (19%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV N+AE + ++G+ ISA+G D+ G +L +++ + T + + + T V S
Sbjct: 404 GGVGHNIAENIHRIGNDILFISAIGNDLLGKMLKQYFTDIKMKTNAL-IESEFSTPVYSG 462
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D G+L A V ++ K + I+QF IS+A +++D N + + K A
Sbjct: 463 VIDTAGQLTAGVIDRRAL-KGMKVKNIQQFEKEISNAKYVVIDTNFDLDVIKETLKYAKG 521
Query: 126 CNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+W EP T + +T V+ I SPN E+ ++ + ++ + +
Sbjct: 522 ---KIWVEPSGETSLKILTEEVLSRIDYFSPNNFEIEWLSKKIG----YKGVGCD---GG 571
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
++ +K A L + +G++ +++ LGS G LL K
Sbjct: 572 NITGCIKMAEL-FINRGVKTLIVKLGSSGCLLVEKR------------------------ 606
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSG 299
Q + H+PA S+V + GAGD L T++++ G
Sbjct: 607 ------------------NEQLYYKHYPAFEVDSIVDVHGAGDALSASTVSALQRG 644
>gi|427402807|ref|ZP_18893804.1| hypothetical protein HMPREF9710_03400 [Massilia timonae CCUG 45783]
gi|425718613|gb|EKU81560.1| hypothetical protein HMPREF9710_03400 [Massilia timonae CCUG 45783]
Length = 371
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARN+AE +++LG+ +++A+G D +G LL + AG+ T G R + +
Sbjct: 91 FGGVARNIAENLARLGAPTALVTAVGGDSSGRALLSYADEAGIDTRGALRVDGAASGTYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD +G++ A+A +E I + LTPD++ + A++++ D NL +A + +
Sbjct: 151 AVLDEDGDMRVALADME-INESLTPDFLATREQQRAGAALIVADLNLPRETVATLLEGSR 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+P+ VS K R+ + + ++ N EL A A RP+ A
Sbjct: 210 RDGVPMVIVAVSEPKIDRLPRDLTGLRLLILNVGELAARAG--------RPLATAADIAA 261
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ + L G+R V++T G+ G + +
Sbjct: 262 ACAE--------LRRDGVRDVIVTRGAQGAMFTT 287
>gi|416775402|ref|ZP_11874292.1| pseudouridine kinase [Escherichia coli O157:H7 str. G5101]
gi|425144834|ref|ZP_18544843.1| pseudouridine kinase [Escherichia coli 10.0869]
gi|425261955|ref|ZP_18653985.1| pseudouridine kinase [Escherichia coli EC96038]
gi|445012918|ref|ZP_21329036.1| pseudouridine kinase [Escherichia coli PA48]
gi|320641237|gb|EFX10715.1| pseudouridine kinase [Escherichia coli O157:H7 str. G5101]
gi|408180622|gb|EKI07227.1| pseudouridine kinase [Escherichia coli EC96038]
gi|408591555|gb|EKK65976.1| pseudouridine kinase [Escherichia coli 10.0869]
gi|444624560|gb|ELV98442.1| pseudouridine kinase [Escherichia coli PA48]
Length = 313
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+ D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVSSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|218702471|ref|YP_002410100.1| hypothetical protein ECIAI39_4226 [Escherichia coli IAI39]
gi|301025034|ref|ZP_07188632.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|386626520|ref|YP_006146248.1| hypothetical protein CE10_4262 [Escherichia coli O7:K1 str. CE10]
gi|432545468|ref|ZP_19782294.1| pyrimidine kinase [Escherichia coli KTE236]
gi|432550949|ref|ZP_19787700.1| pyrimidine kinase [Escherichia coli KTE237]
gi|432623251|ref|ZP_19859272.1| pyrimidine kinase [Escherichia coli KTE76]
gi|218372457|emb|CAR20333.1| putative carbohydrate kinase [Escherichia coli IAI39]
gi|300396241|gb|EFJ79779.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|349740256|gb|AEQ14962.1| hypothetical protein CE10_4262 [Escherichia coli O7:K1 str. CE10]
gi|431071091|gb|ELD79246.1| pyrimidine kinase [Escherichia coli KTE236]
gi|431076242|gb|ELD83746.1| pyrimidine kinase [Escherichia coli KTE237]
gi|431157615|gb|ELE58253.1| pyrimidine kinase [Escherichia coli KTE76]
Length = 364
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRNVHLISAVGNDFYGETLLEQTRLAGVNVTNCIRLNGQNTSTYVS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTP---DWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
I D+ E A+ +++ LTP D R I H A V++ D NL+P AL +
Sbjct: 153 IADLQAETVMAINDTHILQQ-LTPQLLDASRMLIRH---AGVVLADCNLTPAALEWIFTV 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A IPV+ + VS K+ + + + +I + P + EL + + P++
Sbjct: 209 AD--GIPVFIDTVSKFKAVNVKNWLPHIHTLKPTQKELEILWGS--------PVNNET-- 256
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L A+ L ++G++ + + +G + V +E
Sbjct: 257 ------DLLTAVNALHQQGVQQIFVWMGDESVFCSQRE 288
>gi|417310231|ref|ZP_12097050.1| putative sugar kinase yeiI [Escherichia coli PCN033]
gi|338768188|gb|EGP22989.1| putative sugar kinase yeiI [Escherichia coli PCN033]
Length = 364
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRNVHLISAVGNDFYGETLLEQTRLAGVNVTSCIRLNGQNTSTYVS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTP---DWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
I D+ E A+ +++ LTP D R I H A V++ D NL+P AL +
Sbjct: 153 IADLQAETVMAINDTHILQQ-LTPQLLDASRMLIRH---AGVVLADCNLTPAALEWIFTV 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A IPV+ + VS K+ + + + +I + P + EL + + P++
Sbjct: 209 AD--GIPVFIDTVSKFKAVNVKNWLPHIHTLKPTQKELEILWGS--------PVNNET-- 256
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L A+ L ++G++ + + +G + V +E
Sbjct: 257 ------DLLTAVNALHQQGVQQIFVWMGDESVFCSQRE 288
>gi|223985165|ref|ZP_03635257.1| hypothetical protein HOLDEFILI_02563 [Holdemania filiformis DSM
12042]
gi|223962874|gb|EEF67294.1| hypothetical protein HOLDEFILI_02563 [Holdemania filiformis DSM
12042]
Length = 314
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ +LGGV RN+AE +++LG ++S +G D G +LE ++ G+ ++ D T
Sbjct: 32 IRTMLGGVGRNLAENLARLGENVSLVSVVGDDSFGRWILEQGQACGVDMRWVQSLPDQRT 91
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ILD + +L +A+A + +I L +R ++ + +L+ D NL+P +
Sbjct: 92 SAFLAILDPDHDLHSAIADM-TILNQLDQACLRPVLNSLQPEDLLIWDTNLNPELIH--- 147
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IA + P+ +P+S +KS + V+ +T PN E A L G + P +
Sbjct: 148 WIADQAPCPLAMDPLSASKSEKARPVLNRLTYFKPNRAE----AERLCGFAIPTPAE--- 200
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ A+ E+G+ VL+LG+ G
Sbjct: 201 ---------IRAALDWFAEQGVEETVLSLGAQGT 225
>gi|336374930|gb|EGO03266.1| hypothetical protein SERLA73DRAFT_69168 [Serpula lacrymans var.
lacrymans S7.3]
Length = 811
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 60/353 (16%)
Query: 1 VNYVLGGVARNVAECMSK--------LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGV RN++E + L S ++S +G D G +L++ + G+ T+G+
Sbjct: 430 VSISLGGVGRNISEAAHRIMSSQSPDLSSATMLMSPVGSDPFGRLLMDETRMLGMRTDGL 489
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ +AV + ++D +G L VA ++ I L D + +++ + VL VD NLS
Sbjct: 490 IANDEESSAVCNMLVDASGNLKEGVADMD-ITCSLDGDMVVRYLE-TYTPKVLAVDGNLS 547
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--------ITVVSPNEDELVAMA 164
L ++ + ++FEP SV KS I S + +T SPN EL +
Sbjct: 548 ETTLTTLVDYCSQKILDIFFEPTSVMKSTNILSAIAEVKDLTRSPVTFASPNILELCRIY 607
Query: 165 NA--------LSGENMFRPID------RNKHSAESLFQT-------LKPAILVLLEKGIR 203
+ +S E +R ID + E L + + + L+ +GI
Sbjct: 608 HEVRSPSWDLMSSEAWWRVIDGFGLGSAFRMDLEKLARMDVSKDDPRQGTLSFLISEGIA 667
Query: 204 LVVLTL---GSDGVLLCSKE-LLSSMRIG--LRKTKPYGFSRDLY--KTVTSRCHSSRYS 255
+ + L V+ C + ++ +MR+ + +T P+ + + + + V +R SSR
Sbjct: 668 QMAINLLPFFEKLVIKCGERGVIVAMRLSGHVVETLPWISATNSFDARRVIARSMSSREM 727
Query: 256 GAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
++ HFPAL +S++ +TGAGD LVG LA++ S +S
Sbjct: 728 VVLQ----------HFPALHIDKSSIINVTGAGDSLVGSLLATLVSNPKAFES 770
>gi|417139080|ref|ZP_11982607.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0259]
gi|417308628|ref|ZP_12095472.1| PfkB domain protein [Escherichia coli PCN033]
gi|432719289|ref|ZP_19954258.1| pseudouridine kinase [Escherichia coli KTE9]
gi|338769815|gb|EGP24591.1| PfkB domain protein [Escherichia coli PCN033]
gi|386157725|gb|EIH14065.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0259]
gi|431263101|gb|ELF55090.1| pseudouridine kinase [Escherichia coli KTE9]
Length = 313
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ L +K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLENKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|336387904|gb|EGO29048.1| hypothetical protein SERLADRAFT_433061 [Serpula lacrymans var.
lacrymans S7.9]
Length = 811
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 60/353 (16%)
Query: 1 VNYVLGGVARNVAECMSK--------LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGV RN++E + L S ++S +G D G +L++ + G+ T+G+
Sbjct: 430 VSISLGGVGRNISEAAHRIMSSQSPDLSSATMLMSPVGSDPFGRLLMDETRMLGMRTDGL 489
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ +AV + ++D +G L VA ++ I L D + +++ + VL VD NLS
Sbjct: 490 IANDEESSAVCNMLVDASGNLKEGVADMD-ITCSLDGDMVVRYLE-TYTPKVLAVDGNLS 547
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--------ITVVSPNEDELVAMA 164
L ++ + ++FEP SV KS I S + +T SPN EL +
Sbjct: 548 ETTLTTLVDYCSQKILDIFFEPTSVMKSTNILSAIAEVKDLTRSPVTFASPNILELCRIY 607
Query: 165 NA--------LSGENMFRPID------RNKHSAESLFQT-------LKPAILVLLEKGIR 203
+ +S E +R ID + E L + + + L+ +GI
Sbjct: 608 HEVRSPSWDLMSSEAWWRVIDGFGLGSAFRMDLEKLARMDVSKDDPRQGTLSFLISEGIA 667
Query: 204 LVVLTL---GSDGVLLCSKE-LLSSMRIG--LRKTKPYGFSRDLY--KTVTSRCHSSRYS 255
+ + L V+ C + ++ +MR+ + +T P+ + + + + V +R SSR
Sbjct: 668 QMAINLLPFFEKLVIKCGERGVIVAMRLSGHVVETLPWISATNSFDARRVIARSMSSREM 727
Query: 256 GAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
++ HFPAL +S++ +TGAGD LVG LA++ S +S
Sbjct: 728 VVLQ----------HFPALHIDKSSIINVTGAGDSLVGSLLATLVSNPKAFES 770
>gi|194853586|ref|XP_001968188.1| GG24728 [Drosophila erecta]
gi|190660055|gb|EDV57247.1| GG24728 [Drosophila erecta]
Length = 700
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 143/308 (46%), Gaps = 39/308 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G LL+ A G+ + +T++ S
Sbjct: 383 GGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKA--LKRGLIVADNHNTSLCSL 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D G+ + ++E I + +T + ++ A ++++D+N+S A+A+ + A
Sbjct: 441 IFDKFGDCKLILGNME-IHQSITAETLQAHHQLFREAPLIIMDSNISEQAMASILQQAQI 499
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
IPV+FEP + + + + K I ++ PN EL + A++GE + D +
Sbjct: 500 NKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNLQELKTIVEAITGETVAWNPDIKQP 559
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK-ELLSSMRIGLRKTKPYGFSRD 240
AE + Q +++ ++ ++ TL GVLL + + + R+ L D
Sbjct: 560 QAELVHQA--KSLIKKIDCHFNCIIATLSDHGVLLSYRGDAENDARLLL----------D 607
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPA-LPASVVRLTGAGDCLVGGTLASISSG 299
+ K+ C +R+ +PA + ++V ++GAGD G + ++ G
Sbjct: 608 VSKSTPPHC--TRF----------------YPAPMVHNIVNVSGAGDSFCAGFITALLRG 649
Query: 300 LDVMQSVA 307
+ + +A
Sbjct: 650 RTLDECIA 657
>gi|25147470|ref|NP_508405.2| Protein T24C12.3 [Caenorhabditis elegans]
gi|351063352|emb|CCD71506.1| Protein T24C12.3 [Caenorhabditis elegans]
Length = 651
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN A+ +++LG ISA+G D G+ ++ ++ I K T +
Sbjct: 368 MGGVARNHADALARLGCDSVFISAIGDDNNGHFFRQNSHKIDINRVKIISNKPTCTYLAV 427
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
N V G + + + E + +TP + + S+ +++D+NLS P +A +IA
Sbjct: 428 N---VKGNVKYGIVTCEPLLSVITPSLVESNEDALESSDFILLDSNLSVPVMARVLEIAK 484
Query: 125 ECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ + VW EP + K +++ T +V +T SPN +E + A
Sbjct: 485 KHDKQVWLEPTDIDKVKKVFDTGLVGAVTAASPNANEFLKWA 526
>gi|399052643|ref|ZP_10741945.1| sugar kinase, ribokinase [Brevibacillus sp. CF112]
gi|433543362|ref|ZP_20499771.1| hypothetical protein D478_06629 [Brevibacillus agri BAB-2500]
gi|398049499|gb|EJL41918.1| sugar kinase, ribokinase [Brevibacillus sp. CF112]
gi|432185363|gb|ELK42855.1| hypothetical protein D478_06629 [Brevibacillus agri BAB-2500]
Length = 317
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 17/220 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V V GGVARNVAE + LG + + + +G D G L + +G++T G+ R T
Sbjct: 37 VQQVAGGVARNVAENLGWLGEEVQLFALVGEDADGEWLRQVTAKSGVATHGMVRIAGKST 96
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
I D++GEL AVA +E E + T + ++ + + A+ L +DANL +
Sbjct: 97 GRYLAIRDLDGELYTAVADMEVNEAW-TDELVQHALERLPHAAGLFMDANLPVAVMRVFV 155
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A V +PVSV K+ + + + V+ + DE+ L G+++
Sbjct: 156 DEANRLGKIVVVDPVSVKKAEKWRPFLPGVRVLIASIDEV----EVLCGQSL-------- 203
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
HS F ++ LLE+G+ +++ G G+ LC +E
Sbjct: 204 HS----FSDVEACAKRLLEQGLHQLMVNCGEAGLYLCRQE 239
>gi|432627817|ref|ZP_19863794.1| pseudouridine kinase [Escherichia coli KTE77]
gi|431163186|gb|ELE63622.1| pseudouridine kinase [Escherichia coli KTE77]
Length = 313
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSG 169
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSG 201
>gi|333906655|ref|YP_004480241.1| PfkB domain-containing protein [Marinomonas posidonica IVIA-Po-181]
gi|333476661|gb|AEF53322.1| PfkB domain protein [Marinomonas posidonica IVIA-Po-181]
Length = 358
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+AE +++LG K ++I+ +GLD G+ L+E +++G+ T + R + T
Sbjct: 88 INQSPGGVGRNIAENLARLGEKVHLIAPIGLDQRGDWLIEQTRTSGVDTHHVIRHDTLPT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
I + G+L AA+A + I+ L P + + A ++VDANLS +
Sbjct: 148 GTYLAISNEVGQLQAAIADMRIIDT-LEPHRLAAKTALLQGARGIIVDANLSQECITWLA 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
+ A N + VS K+ ++ ++ ++ V+ N+DE A+ N+
Sbjct: 207 QQA--INATFIADAVSAAKAPKLLPILAHLDVLKVNQDEARAILNS 250
>gi|392597455|gb|EIW86777.1| indigoidine synthase A-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 794
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 1 VNYVLGGVARNVAECMSKLG-----SKP---YMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGV RN+AE ++ SKP ++S +G D G ++ ++GL T G+
Sbjct: 410 VSTSLGGVGRNIAEAAHRVSNALAPSKPSPILLVSPVGDDAFGRQIINDTGASGLYTNGL 469
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ D +AV + ILD G L +A ++ ++ D + ++ ++ +DAN+S
Sbjct: 470 FVEPDKRSAVCNMILDTTGNLVTGIADMDIVQN-QNSDKLLSYLGE-QKPWLVALDANMS 527
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY---------ITVVSPNEDELVAM 163
P L A + + + NI ++FEP S+ KS I + +T SPN EL M
Sbjct: 528 PTILTALVEYSVQQNINIFFEPTSLAKSTAILPAIAKTLGKHDRAPVTFASPNLLELGHM 587
Query: 164 ANA--------LSGENMFRPIDR--NKHSAESLFQTLKPAILVLLEKGIRLVVLT-LGSD 212
+S + ++ IDR H + + L + L E L L+ L D
Sbjct: 588 YREVRSSPLELMSHDVWWKTIDRLGLGHQFRAELEHL--SRLNASEDNPDLGSLSFLIKD 645
Query: 213 GVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV--- 269
GV + +L + + K G ++ S SS++ A EP+ Q V
Sbjct: 646 GVAQMAINMLPFFQNLVIKCGERGVIIAMHLDGHS-AQSSQW--ANEPSNVRQRLVVARA 702
Query: 270 ---------HFPALPA---SVVRLTGAGDCLVGGTLASIS 297
HFPAL S+V +TGAGD LVG +AS++
Sbjct: 703 SSGDVVVFQHFPALSVPQDSIVNVTGAGDSLVGSLVASLA 742
>gi|319653372|ref|ZP_08007472.1| carbohydrate kinase [Bacillus sp. 2_A_57_CT2]
gi|317394856|gb|EFV75594.1| carbohydrate kinase [Bacillus sp. 2_A_57_CT2]
Length = 365
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG +++ +G D G LLE+ K+ T + T +
Sbjct: 93 GGVARNIAENLGRLGCDVGLMTVVGDDPEGEWLLEYTKAFADVTPS-QSLAGSTTGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+A A+A + SI + ++ +++ + +++S+ ++++D N P L E
Sbjct: 152 VLDNEGEMAVALADM-SIYESVSREFVEKKWGYLASSEMVILDTNFPPKVLEQIITRCYE 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIP+ PVS K + + +K +T + N++E A AL+G + D K + E
Sbjct: 211 ENIPLCITPVSAPKIKNLPDDLKGVTWLIANQNE----AEALTGMEISNEGDFFKAAQE- 265
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+++KG+ VV++ G G++
Sbjct: 266 -----------IMKKGVERVVISRGDKGLI 284
>gi|308510919|ref|XP_003117642.1| hypothetical protein CRE_00938 [Caenorhabditis remanei]
gi|308238288|gb|EFO82240.1| hypothetical protein CRE_00938 [Caenorhabditis remanei]
Length = 374
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN A+ + +LG ISA+G D G +H + + K T +
Sbjct: 76 MGGVARNHADALGRLGCDSIFISAIGDDQNGQFFRQHSDRFDTNRVKVVPHKPTCTYLAV 135
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
N V G + + + E + LTP I + SA +++DANL P + + +IA
Sbjct: 136 N---VRGNVKYGIVTCEPLLSCLTPSLIESNEDALESADFILLDANLPVPVMTRTLEIAK 192
Query: 125 E-------C--------NIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ C N VWFEP + K++++ T +V +T SPN +E + A
Sbjct: 193 KHEKQGIYCLIGRSDKINFTVWFEPTDIEKTKKVFDTGMVGAVTAASPNANEFLKWA 249
>gi|157374490|ref|YP_001473090.1| ribokinase-like domain-containing protein [Shewanella sediminis
HAW-EB3]
gi|157316864|gb|ABV35962.1| PfkB domain protein [Shewanella sediminis HAW-EB3]
Length = 374
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS+ +ISA+G D G +++ + AG+ +G + D++T+ +
Sbjct: 104 GGVGRNIAENLARLGSETRLISAVGKDTYGQMIVSQCQQAGIDMKGCLQLNDVNTSTYLS 163
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD + ++ A+ + +++ L+ + +++ + A ++++DANLS +L +
Sbjct: 164 VLDGDSDMHVAINDMAILDR-LSVEVLKEKEELLRRADLIILDANLSAESL--EYLLNNF 220
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P++ + VS K+++I + + + PN E A LSG I +
Sbjct: 221 SDRPIFVDTVSCVKAKKIKPFLSSVHTLKPNLKE----AEQLSG-----IIIEDYSELPG 271
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L +G++ + L+LGSDGV
Sbjct: 272 LANWFH-------NQGVKRIFLSLGSDGVF 294
>gi|420287495|ref|ZP_14789686.1| pseudouridine kinase [Escherichia coli TW10246]
gi|390790252|gb|EIO57680.1| pseudouridine kinase [Escherichia coli TW10246]
Length = 310
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLNQ---SGVYVDKCLIVPGENT 91
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 92 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWIL 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 151 DNAA--NVPVFVDPVSAWKCVKVRERLSQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 208
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 209 FH-----------------QHGLNRLVLSMGGDGV 226
>gi|229545490|ref|ZP_04434215.1| ribokinase family sugar kinase [Enterococcus faecalis TX1322]
gi|229309406|gb|EEN75393.1| ribokinase family sugar kinase [Enterococcus faecalis TX1322]
Length = 398
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 122 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 181
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 182 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVKKACEIAQH 239
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 240 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 280
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 281 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTHQV 313
>gi|386626523|ref|YP_006146251.1| hypothetical protein CE10_4265 [Escherichia coli O7:K1 str. CE10]
gi|432545471|ref|ZP_19782297.1| pseudouridine kinase [Escherichia coli KTE236]
gi|432550952|ref|ZP_19787703.1| pseudouridine kinase [Escherichia coli KTE237]
gi|432623254|ref|ZP_19859275.1| pseudouridine kinase [Escherichia coli KTE76]
gi|349740259|gb|AEQ14965.1| hypothetical protein CE10_4265 [Escherichia coli O7:K1 str. CE10]
gi|431071094|gb|ELD79249.1| pseudouridine kinase [Escherichia coli KTE236]
gi|431076245|gb|ELD83749.1| pseudouridine kinase [Escherichia coli KTE237]
gi|431157618|gb|ELE58256.1| pseudouridine kinase [Escherichia coli KTE76]
Length = 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G++ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLMSAVGDDFYGQSLLAQTTQSGVNVDKCLIVNGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I + ++ +++ Q I I A V++ D N+S L
Sbjct: 95 SSYLSLLDKTGEMLVAINDM-TISEHISAEFLSQHIDFIQGAKVIVADCNISESTLVWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A + +PV+ +PVS K +I + I + PN E A LSG ++ DRN
Sbjct: 154 NNAGK--VPVFVDPVSAWKCVKIREHLAQIHTLKPNRLE----AETLSGISLS---DRND 204
Query: 181 HSAESL-FQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ F T G+ +VL++G DGV
Sbjct: 205 AEKVAVWFHT----------HGLNRLVLSMGGDGV 229
>gi|167624954|ref|YP_001675248.1| ribokinase-like domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167354976|gb|ABZ77589.1| PfkB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 363
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS ++ISALG D G +++ + AG+ + + T+ +
Sbjct: 93 GGVGRNIAENLARLGSDTHLISALGKDTYGQMIMTQCQQAGIDMKACIHLDEFATSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD + ++ A+ + +++ L+ ++ + A +++VDANLS +L ++
Sbjct: 153 VLDGDSDMHVAINDMAILDR-LSVAVLKTHEEVLRRAELIIVDANLSAESL--EYLLSNF 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P++ + VS K+++I + + + PN E A LSG N+ N H
Sbjct: 210 SDRPIFVDTVSCAKAKKIRPFLSSVHTLKPNLKE----AEQLSGINI------NSH---- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS---KELLSSMRIGL 229
+ L +G++ + L+LG DGV + L+ +M++ +
Sbjct: 256 --EQLPELANWFHSQGVKRIFLSLGCDGVFYSDEGVQALIPAMQVSM 300
>gi|218702474|ref|YP_002410103.1| hypothetical protein ECIAI39_4229 [Escherichia coli IAI39]
gi|218372460|emb|CAR20336.1| putative carbohydrate kinase [Escherichia coli IAI39]
Length = 320
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G++ + +T
Sbjct: 44 IKFTPGGVGRNIAHNLALLGKNSWLMSAVGDDFYGQSLLAQTTQSGVNVDKCLIVNGENT 103
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I + ++ +++ Q I I A V++ D N+S L
Sbjct: 104 SSYLSLLDKTGEMLVAINDM-TISEHISAEFLSQHIDFIQGAKVIVADCNISESTLVWLL 162
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A + +PV+ +PVS K +I + I + PN E A LSG ++ DRN
Sbjct: 163 NNAGK--VPVFVDPVSAWKCVKIREHLAQIHTLKPNRLE----AETLSGISLS---DRND 213
Query: 181 HSAESL-FQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ F T G+ +VL++G DGV
Sbjct: 214 AEKVAVWFHT----------HGLNRLVLSMGGDGV 238
>gi|257783949|ref|YP_003179166.1| MarR family transcriptional regulator [Atopobium parvulum DSM
20469]
gi|257472456|gb|ACV50575.1| transcriptional regulator, MarR family [Atopobium parvulum DSM
20469]
Length = 360
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 75/329 (22%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+A ++ L S +++A G D L E G+ + T
Sbjct: 89 VTISFGGVGRNIAHNLALLDSDVRLLTAFGEDYRARELKEGCLDCGIDIDASITVPGAST 148
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I++ +GE+ A+ ++ I +++TP+ I + + I A+ ++D NL +
Sbjct: 149 STYLFIMNEHGEMQEAINDMQ-IYEYVTPERIEERLDVIQHAAACVIDTNLPQQTIEF-- 205
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IA P++ +PVS K++++ V+ + + PN E A LSG + D
Sbjct: 206 -IAKNVTCPIFCDPVSSIKAQKLKKVLGKLYTLKPNRLE----AEMLSG---IKITDD-- 255
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+L+ A LL G++ V ++LG G LLC+ D
Sbjct: 256 -------ASLEAAAHELLATGLKRVFISLGEKG-LLCA---------------------D 286
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
KT + P LPA ++ +TGAGD ++ G + + G+
Sbjct: 287 HEKT------------------------IRLPLLPAKLINMTGAGDAMMAGITWAYTQGM 322
Query: 301 DVMQ---------SVAVDDAKTVYAAANV 320
+ Q S+A++ +T+ + NV
Sbjct: 323 TLEQTGLVGMAASSIAIEGEETINSQLNV 351
>gi|420373836|ref|ZP_14873899.1| pseudouridine kinase [Shigella flexneri 1235-66]
gi|391316859|gb|EIQ74244.1| pseudouridine kinase [Shigella flexneri 1235-66]
Length = 313
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL +G+ E +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKDSWLLTAVGNDFYGQSLLAQTNQSGVHVEKCLIVAGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ ++ Q I +A V++ D N+S AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITDHISAAFLSQHRDFIRAAKVIVADCNISEDALTWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ A E +PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENAGE--VPVFVDPVSAWKCVKIREQLGKIHTLKPNRLEAETLSGIALSGREDVGKVATW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H E+G+ +VL++G DGV
Sbjct: 212 FH-----------------ERGLNRLVLSMGGDGV 229
>gi|433460916|ref|ZP_20418536.1| hypothetical protein D479_05020 [Halobacillus sp. BAB-2008]
gi|432190824|gb|ELK47824.1| hypothetical protein D479_05020 [Halobacillus sp. BAB-2008]
Length = 369
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG++P +I+A G D I+ + + +G+ D +T +
Sbjct: 98 GGVARNIAENLGRLGNRPTLITAAGRDADWEIIARA-SAEYIIMDGVLHLPDRNTGTYTA 156
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A A + +I + P+ IR+ A ++ D N LA K AA
Sbjct: 157 VLDEHGEMTMAFADM-AIYDAVLPEEIRRHEKKWKQAECVIADLNCPQETLAFLLKEAAA 215
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ PV F VS+ K +R+ S + +T + N +E S + PI
Sbjct: 216 DHTPVAFITVSIPKMKRLPSDISGLTWLMTNVEE--------SAAHFDIPIQNEAQ---- 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
K A+ L G+R V +T G GV++
Sbjct: 264 ----WKDAVEHWLACGVRYVTVTWGKRGVMV 290
>gi|417310234|ref|ZP_12097053.1| PfkB domain protein [Escherichia coli PCN033]
gi|338768191|gb|EGP22992.1| PfkB domain protein [Escherichia coli PCN033]
Length = 311
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G++ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLMSAVGDDFYGQSLLAQTTQSGVNVDKCLIVNGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I + ++ +++ Q I I A V++ D N+S L
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-TISEHISAEFLSQHIDFIQGAKVIVADCNISESTLVWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A + +PV+ +PVS K +I + I + PN E A LSG ++ DRN
Sbjct: 154 NNAGK--VPVFVDPVSAWKCVKIREHLAQIHTLKPNRLE----AETLSGISLS---DRND 204
Query: 181 HSAESL-FQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ F T G+ +VL++G DGV
Sbjct: 205 AEKVAVWFHT----------HGLNRLVLSMGGDGV 229
>gi|293382416|ref|ZP_06628353.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis R712]
gi|293388265|ref|ZP_06632781.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis S613]
gi|312908357|ref|ZP_07767321.1| putative ribokinase [Enterococcus faecalis DAPTO 512]
gi|312910570|ref|ZP_07769412.1| putative ribokinase [Enterococcus faecalis DAPTO 516]
gi|291080192|gb|EFE17556.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis R712]
gi|291082347|gb|EFE19310.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis S613]
gi|310625771|gb|EFQ09054.1| putative ribokinase [Enterococcus faecalis DAPTO 512]
gi|311289118|gb|EFQ67674.1| putative ribokinase [Enterococcus faecalis DAPTO 516]
Length = 637
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLETGVKNVIVTLGKKGVLLKTHQV 552
>gi|256961582|ref|ZP_05565753.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256952078|gb|EEU68710.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
Length = 636
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLETGVKNVIVTLGKKGVLLKTHQV 551
>gi|345300080|ref|YP_004829438.1| PfkB domain-containing protein [Enterobacter asburiae LF7a]
gi|345094017|gb|AEN65653.1| PfkB domain protein [Enterobacter asburiae LF7a]
Length = 364
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNISSSIRLHGHNTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + E A+ +EK LTP + R I H A V++ D NL+ A+ I
Sbjct: 153 IANQQEETVLAINDTHILEK-LTPQLLNGSRDLIRH---AGVVLADCNLTAEAIEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A + IPV+ + VS K+ +I + I + P + EL L G+ + DR K
Sbjct: 209 ADD--IPVFIDTVSEFKAEKIKTWYSRIHTLKPTQKEL----EILWGQPIRSDADRIK-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
AI L ++G+ + + L + V CSK+
Sbjct: 261 ----------AINALHQQGVEHIYVCLKDESV-FCSKK 287
>gi|308460728|ref|XP_003092665.1| hypothetical protein CRE_01384 [Caenorhabditis remanei]
gi|308252673|gb|EFO96625.1| hypothetical protein CRE_01384 [Caenorhabditis remanei]
Length = 652
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN AE + +LG ISA+G D G ++ + ++ + K T +
Sbjct: 369 MGGVARNHAEALGRLGCDSIFISAIGDDSNGQFFRQNSEKMDITRVKVMTNKPTCTYLAV 428
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
N V G + + + E + LTP I + + ++ ++++D+NL P + +IA
Sbjct: 429 N---VRGNVKYGIVTSEPLLSTLTPALIEKNEDALETSDLILLDSNLPVPLMTKVLEIAK 485
Query: 125 ECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ VWFEP + K +++ T + +T SPN +E + A
Sbjct: 486 KHEKQVWFEPTDIDKVKKVFATGLADAVTAASPNANEFLEWA 527
>gi|320536211|ref|ZP_08036259.1| kinase, PfkB family [Treponema phagedenis F0421]
gi|320146967|gb|EFW38535.1| kinase, PfkB family [Treponema phagedenis F0421]
Length = 367
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+AE + +LG++ +I+A G D+ + G+
Sbjct: 93 VRVSFGGVGRNIAENLVRLGTQVKLITAFGDDLQAESMKNFCIQTGIDISDSNMPAGRSG 152
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I D GE+ A+A + I ++P++++ + HI+ +++ + D N+ +L
Sbjct: 153 STYLFITDERGEMQLAIADM-GIFDTISPEFLQSKLPHINQSALCVADTNIPEESLHF-- 209
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPN--EDELVAMANALSGENMFRPIDR 178
+ C +P++ + VSVTK+ +I + ++ I + PN E E + E++ R D
Sbjct: 210 -LFRHCTVPLFVDTVSVTKAEKIKAGLRSIHTIKPNKLEAEFLTGIPIADDEDLHRVADN 268
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
LL+KG+R V ++LG G+ K
Sbjct: 269 ------------------LLQKGVRQVFISLGMRGLFCADK 291
>gi|226313653|ref|YP_002773547.1| hypothetical protein BBR47_40660 [Brevibacillus brevis NBRC 100599]
gi|226096601|dbj|BAH45043.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 317
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 17/215 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + LG + + + +G D G L + ++G++T G+ R T
Sbjct: 42 GGVARNVAENLGWLGEEVQLFALVGEDADGEWLRQVTANSGVATHGMLRIAGKSTGRYLA 101
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D +GEL AVA +E E++ D I+Q + + A+ L +DANL + A
Sbjct: 102 IRDRDGELYTAVADMELNEEW-PADIIQQGLKRLPQAAGLFLDANLPVEVMRVFLTEARR 160
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ + +PVSV K+ + +++ + ++ + DEL L G+ + HS
Sbjct: 161 LDKKIVVDPVSVKKAEKWKGMLEGVHILVTSIDEL----EVLGGQTL--------HSYND 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + K L+ +GI V++ G G+ LC+ +
Sbjct: 209 VEECAKK----LVAEGIHQVMVICGEAGLWLCTAQ 239
>gi|114771302|ref|ZP_01448722.1| carbohydrate kinase, PfkB family protein [Rhodobacterales bacterium
HTCC2255]
gi|114548227|gb|EAU51114.1| carbohydrate kinase, PfkB family protein [Rhodobacterales bacterium
HTCC2255]
Length = 374
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 62/300 (20%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE M+++ +IS +G D +G L ++ G+ T I D TA
Sbjct: 96 GGVIRNIAENMARMDVDVCLISIIGNDESGKELRSQIRNLGVDTSQISISNDKPTAEYIA 155
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D EL +AS++ +++ +TP I + I S+ +++D NL + +I
Sbjct: 156 IFDDKNELVMGIASMDILDQ-ITPSLIEESWSSIRSSDWVILDCNLPKETIEKILEIKEN 214
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V + VSV+K++R+ S + I ++ N+DE +++ +D N + +
Sbjct: 215 ANFMVAVDTVSVSKAKRLPSNLSQIDILFTNKDEAISVLG----------LDDNLKTYK- 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L L G + VVLT G +G L+
Sbjct: 264 ----LDEITTQLRSTGAKGVVLTDGPNGHLVN---------------------------- 291
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
G F + PA+ ++V ++GAGD V G +++I SG V ++
Sbjct: 292 ---------------IGNEAFTS---PAISSNVKNVSGAGDAFVAGFISTIRSGSTVREA 333
>gi|307275632|ref|ZP_07556773.1| putative ribokinase [Enterococcus faecalis TX2134]
gi|306507737|gb|EFM76866.1| putative ribokinase [Enterococcus faecalis TX2134]
Length = 637
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVKKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTHQV 552
>gi|256619403|ref|ZP_05476249.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256853443|ref|ZP_05558813.1| transcriptional regulator [Enterococcus faecalis T8]
gi|256598930|gb|EEU18106.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256711902|gb|EEU26940.1| transcriptional regulator [Enterococcus faecalis T8]
Length = 636
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVKKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTHQV 551
>gi|331268646|ref|YP_004395138.1| PfkB domain-containing protein [Clostridium botulinum BKT015925]
gi|329125196|gb|AEB75141.1| PfkB domain protein [Clostridium botulinum BKT015925]
Length = 359
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 24/217 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG RN+AE +S+LG K +I+ LG D+ + ++ ++ G+ G++ I S
Sbjct: 93 GGAGRNIAENISRLGVKVELITVLGDDVHAQEIEKNCRTLGI---GLKHTMVIPGENTST 149
Query: 66 ILDVNGELAAAVASVESIEKF--LTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ +N + ++ +E + +TP+++ + I+ +S++++DANLS A+ C+
Sbjct: 150 YICINDKEENRKLAISDMEIYSKITPEYLSTKLEIINRSSLILIDANLSEKAIDFLCE-- 207
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
C +P++ + VS K+ ++ ++ I ++ N E A LSG +
Sbjct: 208 -NCCVPIFVDAVSTKKAVKLKNIFSSIYSINLNRME----AEILSGIKIIN--------- 253
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ LK +L++ GI+ V ++LG DGV + E
Sbjct: 254 ---YDDLKKCSDILIKYGIKNVFISLGKDGVYYANYE 287
>gi|307295956|ref|ZP_07575788.1| putative ribokinase [Enterococcus faecalis TX0411]
gi|422686341|ref|ZP_16744539.1| putative ribokinase [Enterococcus faecalis TX4000]
gi|422719419|ref|ZP_16776060.1| putative ribokinase [Enterococcus faecalis TX0017]
gi|422741800|ref|ZP_16795822.1| putative ribokinase [Enterococcus faecalis TX2141]
gi|306496287|gb|EFM65866.1| putative ribokinase [Enterococcus faecalis TX0411]
gi|315028971|gb|EFT40903.1| putative ribokinase [Enterococcus faecalis TX4000]
gi|315033245|gb|EFT45177.1| putative ribokinase [Enterococcus faecalis TX0017]
gi|315143505|gb|EFT87521.1| putative ribokinase [Enterococcus faecalis TX2141]
Length = 637
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVKKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTHQV 552
>gi|301025037|ref|ZP_07188635.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|300396244|gb|EFJ79782.1| kinase, PfkB family [Escherichia coli MS 69-1]
Length = 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G++ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLMSAVGDDFYGQSLLAQTTQSGVNVDKCLIVNGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I + ++ +++ Q I I A V++ D N+S L
Sbjct: 95 SSYLSLLDKTGEMLVAINDM-TISEHISAEFLSQHIDFIQGAKVIVADCNISESTLVWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A + +PV+ +PVS K +I + I + PN E A LSG ++ DRN
Sbjct: 154 NNAGK--VPVFVDPVSAWKCVKIREHLAQIHTLKPNWLE----AETLSGISLS---DRND 204
Query: 181 HSAESL-FQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ F T G+ +VL++G DGV
Sbjct: 205 AEKVAVWFHT----------HGLNRLVLSMGGDGV 229
>gi|384518931|ref|YP_005706236.1| regulatory protein, LacI family protein [Enterococcus faecalis 62]
gi|323481064|gb|ADX80503.1| bacterial regulatory protein, LacI family protein [Enterococcus
faecalis 62]
Length = 637
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTHQV 552
>gi|312902707|ref|ZP_07761911.1| putative ribokinase [Enterococcus faecalis TX0635]
gi|422690267|ref|ZP_16748324.1| putative ribokinase [Enterococcus faecalis TX0630]
gi|422705478|ref|ZP_16763280.1| putative ribokinase [Enterococcus faecalis TX0043]
gi|422732508|ref|ZP_16788839.1| putative ribokinase [Enterococcus faecalis TX0645]
gi|310633761|gb|EFQ17044.1| putative ribokinase [Enterococcus faecalis TX0635]
gi|315157006|gb|EFU01023.1| putative ribokinase [Enterococcus faecalis TX0043]
gi|315161532|gb|EFU05549.1| putative ribokinase [Enterococcus faecalis TX0645]
gi|315576782|gb|EFU88973.1| putative ribokinase [Enterococcus faecalis TX0630]
Length = 637
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|422730197|ref|ZP_16786590.1| putative ribokinase [Enterococcus faecalis TX0012]
gi|315149326|gb|EFT93342.1| putative ribokinase [Enterococcus faecalis TX0012]
Length = 639
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|257090211|ref|ZP_05584572.1| predicted protein [Enterococcus faecalis CH188]
gi|257422282|ref|ZP_05599272.1| lacI family transcriptional regulator [Enterococcus faecalis X98]
gi|256999023|gb|EEU85543.1| predicted protein [Enterococcus faecalis CH188]
gi|257164106|gb|EEU94066.1| lacI family transcriptional regulator [Enterococcus faecalis X98]
Length = 636
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|424759985|ref|ZP_18187640.1| putative ribokinase [Enterococcus faecalis R508]
gi|402404056|gb|EJV36690.1| putative ribokinase [Enterococcus faecalis R508]
Length = 639
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|256762859|ref|ZP_05503439.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256684110|gb|EEU23805.1| conserved hypothetical protein [Enterococcus faecalis T3]
Length = 636
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|422723970|ref|ZP_16780460.1| putative ribokinase [Enterococcus faecalis TX2137]
gi|424672892|ref|ZP_18109835.1| putative ribokinase [Enterococcus faecalis 599]
gi|315025933|gb|EFT37865.1| putative ribokinase [Enterococcus faecalis TX2137]
gi|402353398|gb|EJU88230.1| putative ribokinase [Enterococcus faecalis 599]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|422704833|ref|ZP_16762643.1| putative ribokinase [Enterococcus faecalis TX1302]
gi|315163622|gb|EFU07639.1| putative ribokinase [Enterococcus faecalis TX1302]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|422702087|ref|ZP_16759927.1| putative ribokinase [Enterococcus faecalis TX1342]
gi|315169568|gb|EFU13585.1| putative ribokinase [Enterococcus faecalis TX1342]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|256959241|ref|ZP_05563412.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256949737|gb|EEU66369.1| conserved hypothetical protein [Enterococcus faecalis DS5]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|229549737|ref|ZP_04438462.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis ATCC 29200]
gi|312950956|ref|ZP_07769866.1| putative ribokinase [Enterococcus faecalis TX0102]
gi|422692742|ref|ZP_16750757.1| putative ribokinase [Enterococcus faecalis TX0031]
gi|422695305|ref|ZP_16753293.1| putative ribokinase [Enterococcus faecalis TX4244]
gi|422725154|ref|ZP_16781622.1| putative ribokinase [Enterococcus faecalis TX0312]
gi|229305006|gb|EEN71002.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis ATCC 29200]
gi|310631105|gb|EFQ14388.1| putative ribokinase [Enterococcus faecalis TX0102]
gi|315147588|gb|EFT91604.1| putative ribokinase [Enterococcus faecalis TX4244]
gi|315152201|gb|EFT96217.1| putative ribokinase [Enterococcus faecalis TX0031]
gi|315159840|gb|EFU03857.1| putative ribokinase [Enterococcus faecalis TX0312]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|300860612|ref|ZP_07106699.1| putative ribokinase [Enterococcus faecalis TUSoD Ef11]
gi|428767330|ref|YP_007153441.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis str. Symbioflor 1]
gi|300849651|gb|EFK77401.1| putative ribokinase [Enterococcus faecalis TUSoD Ef11]
gi|427185503|emb|CCO72727.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis str. Symbioflor 1]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|170767615|ref|ZP_02902068.1| kinase, pfkB family protein [Escherichia albertii TW07627]
gi|170123949|gb|EDS92880.1| kinase, pfkB family protein [Escherichia albertii TW07627]
Length = 313
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + D +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPDENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ +++ Q I A V++ D NLS ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISDCISAEFLAQHQKFIRGARVIVADCNLSEDALAWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
K + PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 KNGGD--TPVFVDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVVKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|307272880|ref|ZP_07554127.1| putative ribokinase [Enterococcus faecalis TX0855]
gi|306510494|gb|EFM79517.1| putative ribokinase [Enterococcus faecalis TX0855]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|257084869|ref|ZP_05579230.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256992899|gb|EEU80201.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|255972433|ref|ZP_05423019.1| predicted protein [Enterococcus faecalis T1]
gi|255963451|gb|EET95927.1| predicted protein [Enterococcus faecalis T1]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|422697141|ref|ZP_16755087.1| putative ribokinase [Enterococcus faecalis TX1346]
gi|315174267|gb|EFU18284.1| putative ribokinase [Enterococcus faecalis TX1346]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|422708745|ref|ZP_16766273.1| putative ribokinase [Enterococcus faecalis TX0027]
gi|315036730|gb|EFT48662.1| putative ribokinase [Enterococcus faecalis TX0027]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|256964798|ref|ZP_05568969.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256955294|gb|EEU71926.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|227519268|ref|ZP_03949317.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis TX0104]
gi|227555525|ref|ZP_03985572.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis HH22]
gi|422713236|ref|ZP_16769989.1| putative ribokinase [Enterococcus faecalis TX0309A]
gi|422717227|ref|ZP_16773917.1| putative ribokinase [Enterococcus faecalis TX0309B]
gi|424678384|ref|ZP_18115224.1| putative ribokinase [Enterococcus faecalis ERV103]
gi|424681757|ref|ZP_18118543.1| putative ribokinase [Enterococcus faecalis ERV116]
gi|424684581|ref|ZP_18121292.1| putative ribokinase [Enterococcus faecalis ERV129]
gi|424687712|ref|ZP_18124341.1| putative ribokinase [Enterococcus faecalis ERV25]
gi|424691006|ref|ZP_18127533.1| putative ribokinase [Enterococcus faecalis ERV31]
gi|424694682|ref|ZP_18131078.1| putative ribokinase [Enterococcus faecalis ERV37]
gi|424697256|ref|ZP_18133586.1| putative ribokinase [Enterococcus faecalis ERV41]
gi|424702114|ref|ZP_18138277.1| putative ribokinase [Enterococcus faecalis ERV62]
gi|424704334|ref|ZP_18140436.1| putative ribokinase [Enterococcus faecalis ERV63]
gi|424712801|ref|ZP_18144970.1| putative ribokinase [Enterococcus faecalis ERV65]
gi|424715913|ref|ZP_18145235.1| putative ribokinase [Enterococcus faecalis ERV68]
gi|424722305|ref|ZP_18151369.1| putative ribokinase [Enterococcus faecalis ERV72]
gi|424724523|ref|ZP_18153466.1| putative ribokinase [Enterococcus faecalis ERV73]
gi|424726716|ref|ZP_18155370.1| putative ribokinase [Enterococcus faecalis ERV81]
gi|424740471|ref|ZP_18168853.1| putative ribokinase [Enterococcus faecalis ERV85]
gi|424749828|ref|ZP_18177905.1| putative ribokinase [Enterococcus faecalis ERV93]
gi|227073280|gb|EEI11243.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis TX0104]
gi|227175330|gb|EEI56302.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis HH22]
gi|315574485|gb|EFU86676.1| putative ribokinase [Enterococcus faecalis TX0309B]
gi|315581853|gb|EFU94044.1| putative ribokinase [Enterococcus faecalis TX0309A]
gi|402350441|gb|EJU85344.1| putative ribokinase [Enterococcus faecalis ERV116]
gi|402351712|gb|EJU86592.1| putative ribokinase [Enterococcus faecalis ERV103]
gi|402360917|gb|EJU95510.1| putative ribokinase [Enterococcus faecalis ERV129]
gi|402363072|gb|EJU97581.1| putative ribokinase [Enterococcus faecalis ERV31]
gi|402363504|gb|EJU97982.1| putative ribokinase [Enterococcus faecalis ERV25]
gi|402370120|gb|EJV04360.1| putative ribokinase [Enterococcus faecalis ERV62]
gi|402370317|gb|EJV04537.1| putative ribokinase [Enterococcus faecalis ERV37]
gi|402376194|gb|EJV10153.1| putative ribokinase [Enterococcus faecalis ERV41]
gi|402379678|gb|EJV13470.1| putative ribokinase [Enterococcus faecalis ERV65]
gi|402382423|gb|EJV16090.1| putative ribokinase [Enterococcus faecalis ERV63]
gi|402389187|gb|EJV22588.1| putative ribokinase [Enterococcus faecalis ERV68]
gi|402389312|gb|EJV22711.1| putative ribokinase [Enterococcus faecalis ERV72]
gi|402394794|gb|EJV27944.1| putative ribokinase [Enterococcus faecalis ERV73]
gi|402398717|gb|EJV31641.1| putative ribokinase [Enterococcus faecalis ERV81]
gi|402402084|gb|EJV34820.1| putative ribokinase [Enterococcus faecalis ERV85]
gi|402407521|gb|EJV40047.1| putative ribokinase [Enterococcus faecalis ERV93]
Length = 637
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|29376450|ref|NP_815604.1| LacI family transcriptional regulator [Enterococcus faecalis V583]
gi|257419612|ref|ZP_05596606.1| transcriptional regulator [Enterococcus faecalis T11]
gi|29343914|gb|AAO81674.1| transcriptional regulator, LacI family/carbohydrate kinase, PfkB
family protein [Enterococcus faecalis V583]
gi|257161440|gb|EEU91400.1| transcriptional regulator [Enterococcus faecalis T11]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|195118226|ref|XP_002003641.1| GI21777 [Drosophila mojavensis]
gi|193914216|gb|EDW13083.1| GI21777 [Drosophila mojavensis]
Length = 690
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 42/304 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE + KL +ISA+G D G IL + G+ + T++ S
Sbjct: 374 GGVGRNIAEGIYKLYGDVNLISAVGRDQLGQILRQLMPQT--LQNGLIVDESHATSLCSV 431
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +G+ + +E + +TP +++ + A ++++D+N+S A+ ++A
Sbjct: 432 VFDQSGDCKLILGDME-VHNSITPQLLKERSNLFRDAPLIVMDSNISEQAMTCMLELAEH 490
Query: 126 CNIPVWFEPVSV----TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+P++FEP + + + ++I + PN EL + ++G+++ +
Sbjct: 491 YQVPIFFEPTDMFIAGKPFKLPPELTRHIRLTKPNIHELKTIVETITGQSVNWEPNTKVE 550
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+E L Q + +L +E ++ TLG+ GVLL +R + S+ L
Sbjct: 551 RSELLAQAKQ--LLHQIESHFNCIIATLGAHGVLL-----------SIRSDAAHDTSKLL 597
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP--ASVVRLTGAGDCLVGGTLASI--S 297
+++ C HF A P +++V ++GAGD G + ++ S
Sbjct: 598 --SLSPSCE----------------HITHFYAAPKLSNIVNVSGAGDSFCAGFITALLRS 639
Query: 298 SGLD 301
LD
Sbjct: 640 HSLD 643
>gi|170767207|ref|ZP_02901660.1| kinase, pfkB family [Escherichia albertii TW07627]
gi|170123541|gb|EDS92472.1| kinase, pfkB family [Escherichia albertii TW07627]
Length = 362
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSSCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + E A+ +++ LTP + R I H A V++ D NL+P AL +
Sbjct: 153 IANKQEETVLAINDTHILQQ-LTPQLLNGSRDLIRH---AGVVLADCNLTPEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 209 ADE--IPVFVDTVSEFKASKVKTWYSRIHTLKPTQNEL----EILWGQRIKDDDDRIR-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNSLHQQGVKRIFVYLQDESVFCSEKD 288
>gi|257416365|ref|ZP_05593359.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257158193|gb|EEU88153.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|403178912|ref|XP_003337272.2| hypothetical protein PGTG_18917 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164532|gb|EFP92853.2| hypothetical protein PGTG_18917 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 782
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYM-ISALGLDMA-GNILLEHWKSAGLSTEGIRRQKDI 58
V LGGVA N+A LG K M +S LG D + G+ LL +S GL ++GI
Sbjct: 409 VKMSLGGVALNIARASHGLGIKDVMLVSQLGSDCSFGDYLLNQLRSIGLRSDGIHLDNRA 468
Query: 59 DTAVVSNILDVNGELAAAVASVESIEKF---LTPDWIRQFIHHISSASVLMVDANLSPPA 115
T +V+ LD NG+L VA ++SIE LT + +R V+ D NLS
Sbjct: 469 STGIVNMFLDRNGDLLGGVADLKSIENMDGELTSELVRN-----RKPKVVCFDGNLSSDG 523
Query: 116 LAASCKIAAECNIPVW-FEPVSVTKSRRI----------TSVVKYITVVSPNEDEL 160
+ K E + FEP SV+KS +I T+ K +T++ PN EL
Sbjct: 524 IFKLLKTCHESKTVITAFEPTSVSKSTKIMKSLVGLYKSTNGRKKLTMMFPNLQEL 579
>gi|257082252|ref|ZP_05576613.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257087134|ref|ZP_05581495.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256990282|gb|EEU77584.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256995164|gb|EEU82466.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 636
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|403388591|ref|ZP_10930648.1| PfkB family kinase [Clostridium sp. JC122]
Length = 369
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+AE + +LG +I+ +G D+ G +L + G+ E K +++V
Sbjct: 92 LGGVGRNIAENLVRLGVNTKLITTIGDDLYGTKILNECRDLGIDLENSLMLKGYNSSVYM 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD ++ A++ +E ++ ++ ++I+Q + I S+ V ++D N+ P +
Sbjct: 152 SILDSKNDMHVAISEMEILDN-MSIEFIKQKRNIIESSKVAIIDTNI--PKEVIEYVVNN 208
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + + VS KS+++ ++ + PN E A LSG + +NK
Sbjct: 209 FKDTKFFLDTVSTEKSKKVKDIIGKFHTIKPNRYE----AEILSGIEI-----KNK---- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ L L KG+ V ++LG +G +E
Sbjct: 256 ---EDLTKVSEFFLNKGVERVFVSLGEEGTYYNDQE 288
>gi|307287926|ref|ZP_07567959.1| putative ribokinase [Enterococcus faecalis TX0109]
gi|306501071|gb|EFM70378.1| putative ribokinase [Enterococcus faecalis TX0109]
Length = 637
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+GI R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|157144887|ref|YP_001452206.1| hypothetical protein CKO_00616 [Citrobacter koseri ATCC BAA-895]
gi|157082092|gb|ABV11770.1| hypothetical protein CKO_00616 [Citrobacter koseri ATCC BAA-895]
Length = 313
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G L+ +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTAVGSDFYGQSLMAQTNQSGVHVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI F++ +++ Q I A V++ D N+S AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITDFISAEFLSQHADFIRGAKVIVADCNISEEALNWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A + +PV+ +PVS K +I + I + PN E A LSG + D
Sbjct: 154 ENAGD--VPVFVDPVSAWKCVKIRERLGKIHTLKPNRLE----AETLSGIPLSGREDVG- 206
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S + F E G+ +VL++G DGV
Sbjct: 207 -SVAAWFH----------EHGLNRLVLSMGGDGV 229
>gi|407034158|gb|EKE37100.1| T24C12.3, putative [Entamoeba nuttalli P19]
Length = 691
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 21/243 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN GGV N+AE + ++G+ IS +G D+ G +L +++K + T + + + T
Sbjct: 401 VNQNRGGVGHNIAENLHRIGNDILFISTIGNDLLGKMLKQYFKDIKMKTNAL-IESEFAT 459
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V S +++ +G+L A V ++ K + I+QF + IS+A +++D N + +
Sbjct: 460 PVYSGVINTSGQLTAGVIDSRAL-KGMKIQNIQQFKNEISNAEYVIMDTNFGLDIIEEAL 518
Query: 121 KIAAECNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
K A +W EP T + +T V+ I SPN E+ ++ L +
Sbjct: 519 KYAKG---KIWIEPTGETSLKILTEGVMSRIDYFSPNNFEIGWLSKKLGYKGGV------ 569
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY-GFS 238
+++ + +K A L +++GI+ +++ L + G LL K R G +K Y F
Sbjct: 570 -CDGDNIAECIKMAEL-FIDRGIKTLIVKLSAAGCLLVEK------RNGQLYSKEYPAFG 621
Query: 239 RDL 241
DL
Sbjct: 622 VDL 624
>gi|377832814|ref|ZP_09815754.1| kinase, PfkB family [Lactobacillus mucosae LM1]
gi|377553358|gb|EHT15097.1| kinase, PfkB family [Lactobacillus mucosae LM1]
Length = 320
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 22/221 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEH-WKSAGLSTEGIRRQKDID 59
+ +GGV +N+A+ +++L Y+I+ G DM G I++EH G+ + +
Sbjct: 35 IGMAVGGVGQNIAQNLARLEVPTYLITVYGDDMNG-IVMEHSCAQHGIRLDYAEKLTGQR 93
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
++ + D G++ + ++ E +TP ++ + + I+ ASV M+DANL ++
Sbjct: 94 SSGYLYVTDETGDMLLGINDMKICEN-ITPAFLTKRLDFINHASVCMIDANLPEESIKW- 151
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
+ P++ +PVS+ K +R+ ++ I + PN E A ++G +
Sbjct: 152 --LGEHVTAPIFVDPVSIVKGKRVIPILDKIDTLKPNRIE----AEMMTGIKI------- 198
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +T + A LLE G++ V ++LG DG++ + E
Sbjct: 199 -----TDCETAQIAAAKLLEYGVKNVFISLGKDGIMAMNNE 234
>gi|432372843|ref|ZP_19615884.1| pseudouridine kinase [Escherichia coli KTE11]
gi|430895982|gb|ELC18233.1| pseudouridine kinase [Escherichia coli KTE11]
Length = 313
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+++ ++ LG K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNISQNLALLGKKSWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ +++ Q I A V++ D N+S AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNCISAEFLSQHRDFIQGAKVIVADCNISEEALIWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA+ PV+ +PVS K ++ +K I + PN E ++ ALSG +
Sbjct: 154 DNAADA--PVFVDPVSAWKCVKVRERLKQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QNGLNRLVLSMGGDGV 229
>gi|419203991|ref|ZP_13747174.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8B]
gi|378048711|gb|EHW11064.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8B]
Length = 324
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 55 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 114
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 115 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 173
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 174 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 222
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 223 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 250
>gi|415822988|ref|ZP_11511507.1| hypothetical protein ECOK1180_4309 [Escherichia coli OK1180]
gi|417592417|ref|ZP_12243114.1| hypothetical protein EC253486_3024 [Escherichia coli 2534-86]
gi|323176943|gb|EFZ62533.1| hypothetical protein ECOK1180_4309 [Escherichia coli OK1180]
gi|345338754|gb|EGW71181.1| hypothetical protein EC253486_3024 [Escherichia coli 2534-86]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 48 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 107
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 108 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 166
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 167 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 215
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 216 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 243
>gi|366160615|ref|ZP_09460477.1| pseudouridine kinase [Escherichia sp. TW09308]
Length = 313
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+++ ++ LG K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNISQNLALLGKKSWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ +++ Q I A V++ D N+S AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNCISAEFLSQHRDFIQGAKVIVADCNISEEALIWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA+ PV+ +PVS K ++ +K I + PN E ++ ALSG +
Sbjct: 154 DNAADA--PVFVDPVSAWKCVKVRERLKQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QNGLNRLVLSMGGDGV 229
>gi|417213702|ref|ZP_12022743.1| carbohydrate kinase, PfkB family [Escherichia coli JB1-95]
gi|419222147|ref|ZP_13765070.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8E]
gi|419886908|ref|ZP_14407526.1| putative kinase [Escherichia coli O111:H8 str. CVM9570]
gi|419895754|ref|ZP_14415539.1| putative kinase [Escherichia coli O111:H8 str. CVM9574]
gi|420089822|ref|ZP_14601602.1| putative kinase [Escherichia coli O111:H8 str. CVM9602]
gi|420095683|ref|ZP_14607163.1| putative kinase [Escherichia coli O111:H8 str. CVM9634]
gi|424772602|ref|ZP_18199696.1| kinase [Escherichia coli O111:H8 str. CFSAN001632]
gi|378065469|gb|EHW27614.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8E]
gi|386194398|gb|EIH88654.1| carbohydrate kinase, PfkB family [Escherichia coli JB1-95]
gi|388360075|gb|EIL24322.1| putative kinase [Escherichia coli O111:H8 str. CVM9574]
gi|388364152|gb|EIL28021.1| putative kinase [Escherichia coli O111:H8 str. CVM9570]
gi|394387032|gb|EJE64502.1| putative kinase [Escherichia coli O111:H8 str. CVM9602]
gi|394391791|gb|EJE68620.1| putative kinase [Escherichia coli O111:H8 str. CVM9634]
gi|421938153|gb|EKT95740.1| kinase [Escherichia coli O111:H8 str. CFSAN001632]
Length = 321
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 52 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 111
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 112 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 170
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 171 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 219
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 220 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 247
>gi|419930864|ref|ZP_14448456.1| hypothetical protein EC5411_21289 [Escherichia coli 541-1]
gi|388399383|gb|EIL60183.1| hypothetical protein EC5411_21289 [Escherichia coli 541-1]
Length = 362
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYVA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|403343364|gb|EJY71007.1| Indigoidine synthase A family protein, putative [Oxytricha
trifallax]
Length = 695
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 129/250 (51%), Gaps = 40/250 (16%)
Query: 6 GGVARNVAECMSK-LGSKPY-----MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
GG ARNVAEC+++ LG++ I+A+G D IL++ GL T+ I+ +K
Sbjct: 382 GGSARNVAECVARLLGNQNVQENLKFITAVGDDEKAEILVKGLSKLGLDTDSIQVKKGER 441
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDW-IRQFIHHISSASVLMVDANLSPPALAA 118
TA + I++ G+ A +A ++ + + ++QF S +S+L++D+N++ L+
Sbjct: 442 TACFNGIINGQGDFLAGIADMDILSEISKEHLNMQQF----SKSSILLLDSNIAKETLSY 497
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDEL------VAMANALSGE 170
A + + + +EP+S KS RI +++ IT++ PN +L + A +
Sbjct: 498 ILDNAIDIS-QIIYEPISCEKSSRILHENLLSKITMLKPNLIQLNDIYSVICKNQAQNQT 556
Query: 171 NMFRPIDRNKHS------------AESLFQTLKPAILVLLEKG-------IRLVVLTLGS 211
+++PI+ N++S ++ + Q + AI K ++ ++ TLGS
Sbjct: 557 EVYQPININRYSKILDKDSRLNEISKDVVQ-MSSAIFDFAIKNSQSNSSRLQRIITTLGS 615
Query: 212 DGVLLCSKEL 221
+GV++ +++L
Sbjct: 616 EGVMIVNQDL 625
>gi|157144895|ref|YP_001452214.1| hypothetical protein CKO_00624 [Citrobacter koseri ATCC BAA-895]
gi|157082100|gb|ABV11778.1| hypothetical protein CKO_00624 [Citrobacter koseri ATCC BAA-895]
Length = 365
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++SA+G D G LLE + AG++ R +T+ +
Sbjct: 94 GGVGRNIAHNLALLGRDVHLLSAVGSDFYGETLLEQTRQAGVNISSCIRLHGHNTSTYLS 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P A+ IA E
Sbjct: 154 IANQQEETVLAINDTHILQQ-LTPQLLNSSRDLIRHAGVVLADCNLTPEAIEWVFTIADE 212
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
IPV+ + VS K+ +I + I + P + EL
Sbjct: 213 --IPVFIDTVSEFKAEKIRTWYSRIHTLKPTQKEL 245
>gi|398813527|ref|ZP_10572222.1| sugar kinase, ribokinase [Brevibacillus sp. BC25]
gi|398038504|gb|EJL31664.1| sugar kinase, ribokinase [Brevibacillus sp. BC25]
Length = 317
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+ GGVARNVAE + LG + + + +G D G L + ++G++T G+ R T
Sbjct: 37 VHQAAGGVARNVAENLGWLGEEVQLFALVGEDADGEWLRQVTANSGVATHGMLRIAGKST 96
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
I D +GEL AVA +E E++ + ++Q + + A+ L +DANL + A
Sbjct: 97 GRYLAIRDRDGELYTAVADMELNEEW-PAEIVQQGLKRLPQATGLFLDANLPVEVMRAFL 155
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
A + + +PVSV K+ + +++ + ++ + DEL L G+++
Sbjct: 156 AEARRLDKKIIVDPVSVKKAEKWKGLLEGVHILVASIDEL----EVLGGQSL-------- 203
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
HS + ++ L+ +GI V++ G G+ LC+
Sbjct: 204 HS----YNDVEICAKKLVAEGIHQVMVICGEAGLWLCT 237
>gi|311278852|ref|YP_003941083.1| PfkB domain-containing protein [Enterobacter cloacae SCF1]
gi|308748047|gb|ADO47799.1| PfkB domain protein [Enterobacter cloacae SCF1]
Length = 311
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+A+ ++ L +++S +G D G LL ++G+ + + T
Sbjct: 35 IKYTPGGVGRNIAQNLALLNKDSWLLSVVGDDFYGQSLLAQTATSGVHVDKCQVVPGEGT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + +TP +++Q + I A+V++VD N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHITPAFLQQHLAFIRGATVIVVDCNISEDALAWLM 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ PV+ +PVS K +I + I + PN E ++
Sbjct: 154 GNVGQ--TPVFVDPVSAWKCVKIRQHLGRIHTLKPNRLEAETLSGI-------------- 197
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
S + K A L G+R +VL++G DGV K
Sbjct: 198 -SLSGSSEVSKVADWFHLH-GLRRLVLSMGGDGVYYSEK 234
>gi|421834200|ref|ZP_16269290.1| PfkB family kinase [Clostridium botulinum CFSAN001627]
gi|409744433|gb|EKN43022.1| PfkB family kinase [Clostridium botulinum CFSAN001627]
Length = 231
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E ++KLG +I+ALG D+ GN +LE K+ G+ E ++ T+
Sbjct: 93 LGGVGRNIGENLTKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMRENTTSTYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ILD G++ A+A ++ +K + D+I+ I ++ V ++D N+ P +
Sbjct: 153 SILDETGDMMVAIAHMDIFDK-MPLDFIKSKKTVIENSGVCIIDTNI--PQEIIEYIVND 209
Query: 125 ECNIPVWFEPVSVTKSRRI 143
N+ + + VS TK++++
Sbjct: 210 HQNVKFFLDTVSTTKAKKV 228
>gi|422868922|ref|ZP_16915447.1| putative ribokinase [Enterococcus faecalis TX1467]
gi|329572816|gb|EGG54444.1| putative ribokinase [Enterococcus faecalis TX1467]
Length = 606
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|312900925|ref|ZP_07760219.1| putative ribokinase [Enterococcus faecalis TX0470]
gi|311292024|gb|EFQ70580.1| putative ribokinase [Enterococcus faecalis TX0470]
Length = 637
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|417191885|ref|ZP_12013985.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0522]
gi|386190767|gb|EIH79513.1| carbohydrate kinase, PfkB family [Escherichia coli 4.0522]
Length = 302
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 33 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 92
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 93 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 151
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 152 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 200
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 201 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 228
>gi|300981455|ref|ZP_07175536.1| kinase, PfkB family [Escherichia coli MS 200-1]
gi|422374712|ref|ZP_16454987.1| kinase, PfkB family [Escherichia coli MS 60-1]
gi|300307528|gb|EFJ62048.1| kinase, PfkB family [Escherichia coli MS 200-1]
gi|324013949|gb|EGB83168.1| kinase, PfkB family [Escherichia coli MS 60-1]
Length = 351
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 73 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 133 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 191
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ + E PV+ +PVS K +I + I + PN E A LSG + D K
Sbjct: 192 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLE----AETLSGIALSGREDVAK 245
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
SA F + G+ +VL++G DGV
Sbjct: 246 VSA--WFH----------QHGLNRLVLSMGGDGV 267
>gi|307268269|ref|ZP_07549653.1| putative ribokinase [Enterococcus faecalis TX4248]
gi|397700158|ref|YP_006537946.1| bacterial regulatory protein, LacI family protein [Enterococcus
faecalis D32]
gi|306515429|gb|EFM83960.1| putative ribokinase [Enterococcus faecalis TX4248]
gi|397336797|gb|AFO44469.1| bacterial regulatory protein, LacI family protein [Enterococcus
faecalis D32]
Length = 637
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|432802378|ref|ZP_20036357.1| pyrimidine kinase [Escherichia coli KTE84]
gi|431348167|gb|ELG35025.1| pyrimidine kinase [Escherichia coli KTE84]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|283785971|ref|YP_003365836.1| pyrimidine kinase [Citrobacter rodentium ICC168]
gi|282949425|emb|CBG89038.1| putative pyrimidine kinase [Citrobacter rodentium ICC168]
Length = 363
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +TA +
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNISSCIRLHGHNTATYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I E A+ +++ LTP + I A V++ D NL+P A+ +A +
Sbjct: 153 IASQQEETVLAINDTHILQQ-LTPQLLNSSRDLIRHAGVVLADCNLTPEAIEWVFTVADD 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL--------------VAMANALSG-- 169
IPV+ + VS K+ ++ S + I + P + EL VA NAL
Sbjct: 212 --IPVFIDTVSEFKASKVKSWLSRIHTLKPTQKELEILWGHPVHSEAERVAAVNALHQQG 269
Query: 170 -ENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSD 212
+ +F ++ ES+F + K LL VV + G+D
Sbjct: 270 VQQIFVCLED-----ESVFCSAKGGEQFLLTPPAHTVVDSFGAD 308
>gi|432466254|ref|ZP_19708343.1| pyrimidine kinase [Escherichia coli KTE205]
gi|433073353|ref|ZP_20260008.1| pyrimidine kinase [Escherichia coli KTE129]
gi|433120759|ref|ZP_20306431.1| pyrimidine kinase [Escherichia coli KTE157]
gi|433183825|ref|ZP_20368076.1| pyrimidine kinase [Escherichia coli KTE85]
gi|430993838|gb|ELD10182.1| pyrimidine kinase [Escherichia coli KTE205]
gi|431588064|gb|ELI59412.1| pyrimidine kinase [Escherichia coli KTE129]
gi|431642360|gb|ELJ10083.1| pyrimidine kinase [Escherichia coli KTE157]
gi|431706387|gb|ELJ70958.1| pyrimidine kinase [Escherichia coli KTE85]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|384513550|ref|YP_005708643.1| transcriptional regulator [Enterococcus faecalis OG1RF]
gi|422735813|ref|ZP_16792079.1| putative ribokinase [Enterococcus faecalis TX1341]
gi|430361680|ref|ZP_19426757.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis OG1X]
gi|430368579|ref|ZP_19428320.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis M7]
gi|315167348|gb|EFU11365.1| putative ribokinase [Enterococcus faecalis TX1341]
gi|327535439|gb|AEA94273.1| transcriptional regulator [Enterococcus faecalis OG1RF]
gi|429512233|gb|ELA01841.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis OG1X]
gi|429516335|gb|ELA05829.1| PfkB family transcriptional regulator, LacI family/carbohydrate
kinase [Enterococcus faecalis M7]
Length = 637
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ + ++ + LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGD--SMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|191165366|ref|ZP_03027208.1| kinase, pfkB family protein [Escherichia coli B7A]
gi|190904529|gb|EDV64236.1| kinase, pfkB family protein [Escherichia coli B7A]
Length = 313
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ ++ GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFIPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|257079309|ref|ZP_05573670.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294779788|ref|ZP_06745175.1| putative ribokinase [Enterococcus faecalis PC1.1]
gi|256987339|gb|EEU74641.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294453162|gb|EFG21577.1| putative ribokinase [Enterococcus faecalis PC1.1]
Length = 636
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|110642370|ref|YP_670100.1| hypothetical protein ECP_2200 [Escherichia coli 536]
gi|191170170|ref|ZP_03031724.1| kinase, pfkB family [Escherichia coli F11]
gi|218690311|ref|YP_002398523.1| hypothetical protein ECED1_2609 [Escherichia coli ED1a]
gi|300981462|ref|ZP_07175543.1| kinase, PfkB family [Escherichia coli MS 200-1]
gi|312967455|ref|ZP_07781670.1| uncharacterized sugar kinase yeiI [Escherichia coli 2362-75]
gi|331658240|ref|ZP_08359202.1| putative kinase [Escherichia coli TA206]
gi|416335347|ref|ZP_11672040.1| Uncharacterized sugar kinase YeiI [Escherichia coli WV_060327]
gi|417756415|ref|ZP_12404490.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2B]
gi|418997775|ref|ZP_13545369.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1A]
gi|419008397|ref|ZP_13555828.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1C]
gi|419014078|ref|ZP_13561429.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1D]
gi|419019081|ref|ZP_13566388.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1E]
gi|419024581|ref|ZP_13571807.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2A]
gi|419029623|ref|ZP_13576786.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2C]
gi|419035673|ref|ZP_13582759.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2D]
gi|419040311|ref|ZP_13587339.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2E]
gi|419914416|ref|ZP_14432814.1| hypothetical protein ECKD1_14679 [Escherichia coli KD1]
gi|422370276|ref|ZP_16450670.1| kinase, PfkB family [Escherichia coli MS 16-3]
gi|422374719|ref|ZP_16454994.1| kinase, PfkB family [Escherichia coli MS 60-1]
gi|432471527|ref|ZP_19713573.1| pyrimidine kinase [Escherichia coli KTE206]
gi|432713939|ref|ZP_19948979.1| pyrimidine kinase [Escherichia coli KTE8]
gi|432895179|ref|ZP_20106899.1| pyrimidine kinase [Escherichia coli KTE165]
gi|432899180|ref|ZP_20109872.1| pyrimidine kinase [Escherichia coli KTE192]
gi|433029137|ref|ZP_20216996.1| pyrimidine kinase [Escherichia coli KTE109]
gi|433078337|ref|ZP_20264875.1| pyrimidine kinase [Escherichia coli KTE131]
gi|110343962|gb|ABG70199.1| hypothetical sugar kinase YeiI [Escherichia coli 536]
gi|190909686|gb|EDV69271.1| kinase, pfkB family [Escherichia coli F11]
gi|218427875|emb|CAR08641.1| putative kinase [Escherichia coli ED1a]
gi|300307535|gb|EFJ62055.1| kinase, PfkB family [Escherichia coli MS 200-1]
gi|312287652|gb|EFR15557.1| uncharacterized sugar kinase yeiI [Escherichia coli 2362-75]
gi|315297973|gb|EFU57243.1| kinase, PfkB family [Escherichia coli MS 16-3]
gi|320196030|gb|EFW70654.1| Uncharacterized sugar kinase YeiI [Escherichia coli WV_060327]
gi|324013956|gb|EGB83175.1| kinase, PfkB family [Escherichia coli MS 60-1]
gi|331056488|gb|EGI28497.1| putative kinase [Escherichia coli TA206]
gi|377843602|gb|EHU08642.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1A]
gi|377843915|gb|EHU08952.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1C]
gi|377857416|gb|EHU22267.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1D]
gi|377860135|gb|EHU24961.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC1E]
gi|377863365|gb|EHU28170.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2A]
gi|377873831|gb|EHU38462.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2B]
gi|377877805|gb|EHU42394.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2C]
gi|377880029|gb|EHU44601.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2D]
gi|377890351|gb|EHU54808.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC2E]
gi|388386687|gb|EIL48327.1| hypothetical protein ECKD1_14679 [Escherichia coli KD1]
gi|430997916|gb|ELD14165.1| pyrimidine kinase [Escherichia coli KTE206]
gi|431256716|gb|ELF49651.1| pyrimidine kinase [Escherichia coli KTE8]
gi|431421546|gb|ELH03758.1| pyrimidine kinase [Escherichia coli KTE165]
gi|431426832|gb|ELH08876.1| pyrimidine kinase [Escherichia coli KTE192]
gi|431542877|gb|ELI17873.1| pyrimidine kinase [Escherichia coli KTE109]
gi|431596567|gb|ELI66519.1| pyrimidine kinase [Escherichia coli KTE131]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|74312682|ref|YP_311101.1| hypothetical protein SSON_2216 [Shigella sonnei Ss046]
gi|191165365|ref|ZP_03027207.1| kinase, pfkB family [Escherichia coli B7A]
gi|193062274|ref|ZP_03043369.1| kinase, pfkB family [Escherichia coli E22]
gi|193071080|ref|ZP_03052006.1| kinase, pfkB family [Escherichia coli E110019]
gi|194427234|ref|ZP_03059785.1| kinase, pfkB family [Escherichia coli B171]
gi|209919619|ref|YP_002293703.1| hypothetical protein ECSE_2428 [Escherichia coli SE11]
gi|218554728|ref|YP_002387641.1| hypothetical protein ECIAI1_2240 [Escherichia coli IAI1]
gi|218695774|ref|YP_002403441.1| hypothetical protein EC55989_2413 [Escherichia coli 55989]
gi|260844766|ref|YP_003222544.1| kinase [Escherichia coli O103:H2 str. 12009]
gi|260856133|ref|YP_003230024.1| hypothetical protein ECO26_3072 [Escherichia coli O26:H11 str.
11368]
gi|293446510|ref|ZP_06662932.1| hypothetical protein ECCG_00658 [Escherichia coli B088]
gi|300819146|ref|ZP_07099348.1| kinase, PfkB family [Escherichia coli MS 107-1]
gi|300822610|ref|ZP_07102748.1| kinase, PfkB family [Escherichia coli MS 119-7]
gi|309793041|ref|ZP_07687469.1| kinase, PfkB family [Escherichia coli MS 145-7]
gi|331668859|ref|ZP_08369707.1| putative kinase [Escherichia coli TA271]
gi|331678109|ref|ZP_08378784.1| putative kinase [Escherichia coli H591]
gi|332278684|ref|ZP_08391097.1| conserved hypothetical protein [Shigella sp. D9]
gi|383179120|ref|YP_005457125.1| putative kinase [Shigella sonnei 53G]
gi|386705422|ref|YP_006169269.1| Putative kinase [Escherichia coli P12b]
gi|407470052|ref|YP_006783505.1| kinase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481285|ref|YP_006778434.1| putative kinase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481832|ref|YP_006769378.1| kinase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414576757|ref|ZP_11433939.1| pfkB carbohydrate kinase family protein [Shigella sonnei 3233-85]
gi|415793538|ref|ZP_11496155.1| hypothetical protein ECEPECA14_5807 [Escherichia coli EPECa14]
gi|415798323|ref|ZP_11498347.1| hypothetical protein ECE128010_2033 [Escherichia coli E128010]
gi|415813270|ref|ZP_11505079.1| hypothetical protein ECLT68_3451 [Escherichia coli LT-68]
gi|415829144|ref|ZP_11515527.1| hypothetical protein ECOK1357_2488 [Escherichia coli OK1357]
gi|415844586|ref|ZP_11524328.1| hypothetical protein SS53G_1027 [Shigella sonnei 53G]
gi|415876016|ref|ZP_11542589.1| sugar kinase, ribokinase family [Escherichia coli MS 79-10]
gi|417134794|ref|ZP_11979579.1| HTH domain protein [Escherichia coli 5.0588]
gi|417146343|ref|ZP_11987301.1| HTH domain protein [Escherichia coli 1.2264]
gi|417154373|ref|ZP_11992502.1| HTH domain protein [Escherichia coli 96.0497]
gi|417159686|ref|ZP_11996714.1| HTH domain protein [Escherichia coli 99.0741]
gi|417176110|ref|ZP_12005906.1| HTH domain protein [Escherichia coli 3.2608]
gi|417182468|ref|ZP_12009025.1| HTH domain protein [Escherichia coli 93.0624]
gi|417221990|ref|ZP_12025430.1| HTH domain protein [Escherichia coli 96.154]
gi|417254027|ref|ZP_12045783.1| HTH domain protein [Escherichia coli 4.0967]
gi|417269417|ref|ZP_12056777.1| HTH domain protein [Escherichia coli 3.3884]
gi|417298502|ref|ZP_12085741.1| HTH domain protein [Escherichia coli 900105 (10e)]
gi|417581671|ref|ZP_12232473.1| hypothetical protein ECSTECB2F1_2335 [Escherichia coli STEC_B2F1]
gi|417624052|ref|ZP_12274351.1| hypothetical protein ECSTECH18_2806 [Escherichia coli STEC_H.1.8]
gi|417667580|ref|ZP_12317125.1| hypothetical protein ECSTECO31_2389 [Escherichia coli STEC_O31]
gi|417805726|ref|ZP_12452675.1| putative kinase [Escherichia coli O104:H4 str. LB226692]
gi|417833468|ref|ZP_12479916.1| putative kinase [Escherichia coli O104:H4 str. 01-09591]
gi|417863514|ref|ZP_12508562.1| yeiI [Escherichia coli O104:H4 str. C227-11]
gi|418041951|ref|ZP_12680162.1| kinase, PfkB family [Escherichia coli W26]
gi|418266540|ref|ZP_12886021.1| pfkB carbohydrate kinase family protein [Shigella sonnei str.
Moseley]
gi|419210313|ref|ZP_13753393.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8C]
gi|419216208|ref|ZP_13759210.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8D]
gi|419227347|ref|ZP_13770205.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9A]
gi|419232844|ref|ZP_13775621.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9B]
gi|419238411|ref|ZP_13781132.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9C]
gi|419243879|ref|ZP_13786518.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9D]
gi|419249704|ref|ZP_13792288.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9E]
gi|419255520|ref|ZP_13798039.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10A]
gi|419267627|ref|ZP_13809982.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10C]
gi|419273251|ref|ZP_13815550.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10D]
gi|419278639|ref|ZP_13820886.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10E]
gi|419284761|ref|ZP_13826937.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10F]
gi|419290103|ref|ZP_13832195.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11A]
gi|419295430|ref|ZP_13837476.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11B]
gi|419300890|ref|ZP_13842889.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11C]
gi|419307020|ref|ZP_13848920.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11D]
gi|419312028|ref|ZP_13853890.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11E]
gi|419317438|ref|ZP_13859241.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12A]
gi|419323611|ref|ZP_13865304.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12B]
gi|419329575|ref|ZP_13871179.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12C]
gi|419335140|ref|ZP_13876673.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12D]
gi|419340610|ref|ZP_13882074.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12E]
gi|419345825|ref|ZP_13887200.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13A]
gi|419350238|ref|ZP_13891576.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13B]
gi|419355653|ref|ZP_13896911.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13C]
gi|419360743|ref|ZP_13901961.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13D]
gi|419365885|ref|ZP_13907047.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13E]
gi|419376067|ref|ZP_13917092.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14B]
gi|419381404|ref|ZP_13922355.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14C]
gi|419386711|ref|ZP_13927589.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14D]
gi|419392254|ref|ZP_13933066.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15A]
gi|419397294|ref|ZP_13938062.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15B]
gi|419402636|ref|ZP_13943360.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15C]
gi|419407755|ref|ZP_13948444.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15D]
gi|419413339|ref|ZP_13953991.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15E]
gi|419803780|ref|ZP_14328947.1| kinase, PfkB family [Escherichia coli AI27]
gi|419870533|ref|ZP_14392626.1| putative kinase [Escherichia coli O103:H2 str. CVM9450]
gi|419875169|ref|ZP_14397049.1| putative kinase [Escherichia coli O111:H11 str. CVM9534]
gi|419881882|ref|ZP_14403169.1| putative kinase [Escherichia coli O111:H11 str. CVM9545]
gi|419902397|ref|ZP_14421623.1| putative kinase [Escherichia coli O26:H11 str. CVM9942]
gi|419906506|ref|ZP_14425407.1| hypothetical protein ECO10026_01518 [Escherichia coli O26:H11 str.
CVM10026]
gi|420102603|ref|ZP_14613583.1| putative kinase [Escherichia coli O111:H11 str. CVM9455]
gi|420106389|ref|ZP_14616799.1| putative kinase [Escherichia coli O111:H11 str. CVM9553]
gi|420117956|ref|ZP_14627300.1| putative kinase [Escherichia coli O26:H11 str. CVM10021]
gi|420121059|ref|ZP_14630202.1| putative kinase [Escherichia coli O26:H11 str. CVM10030]
gi|420128149|ref|ZP_14636710.1| kinase [Escherichia coli O26:H11 str. CVM10224]
gi|420133246|ref|ZP_14641504.1| putative kinase [Escherichia coli O26:H11 str. CVM9952]
gi|420359223|ref|ZP_14860197.1| pfkB carbohydrate kinase family protein [Shigella sonnei 3226-85]
gi|420363869|ref|ZP_14864753.1| pfkB carbohydrate kinase family protein [Shigella sonnei 4822-66]
gi|420391886|ref|ZP_14891139.1| pfkB carbohydrate kinase family protein [Escherichia coli EPEC
C342-62]
gi|422351305|ref|ZP_16432127.1| kinase, PfkB family [Escherichia coli MS 117-3]
gi|422762374|ref|ZP_16816131.1| pfkB family protein carbohydrate kinase [Escherichia coli E1167]
gi|422777453|ref|ZP_16831105.1| pfkB family protein carbohydrate kinase [Escherichia coli H120]
gi|422988286|ref|ZP_16979059.1| hypothetical protein EUAG_03401 [Escherichia coli O104:H4 str.
C227-11]
gi|422995177|ref|ZP_16985941.1| hypothetical protein EUBG_02828 [Escherichia coli O104:H4 str.
C236-11]
gi|423000252|ref|ZP_16991006.1| hypothetical protein EUEG_02669 [Escherichia coli O104:H4 str.
09-7901]
gi|423003921|ref|ZP_16994667.1| hypothetical protein EUDG_01405 [Escherichia coli O104:H4 str.
04-8351]
gi|423010494|ref|ZP_17001228.1| hypothetical protein EUFG_02820 [Escherichia coli O104:H4 str.
11-3677]
gi|423019721|ref|ZP_17010430.1| hypothetical protein EUHG_02831 [Escherichia coli O104:H4 str.
11-4404]
gi|423024888|ref|ZP_17015585.1| hypothetical protein EUIG_02833 [Escherichia coli O104:H4 str.
11-4522]
gi|423030709|ref|ZP_17021397.1| hypothetical protein EUJG_01468 [Escherichia coli O104:H4 str.
11-4623]
gi|423038535|ref|ZP_17029209.1| hypothetical protein EUKG_02812 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423043654|ref|ZP_17034321.1| hypothetical protein EULG_02829 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423045383|ref|ZP_17036043.1| hypothetical protein EUMG_02401 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423053922|ref|ZP_17042729.1| hypothetical protein EUNG_03639 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423060897|ref|ZP_17049693.1| hypothetical protein EUOG_02837 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423706207|ref|ZP_17680590.1| hypothetical protein ESTG_00683 [Escherichia coli B799]
gi|424749036|ref|ZP_18177158.1| kinase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424761530|ref|ZP_18189102.1| kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|425380193|ref|ZP_18764233.1| putative kinase [Escherichia coli EC1865]
gi|429719766|ref|ZP_19254697.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771648|ref|ZP_19303671.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02030]
gi|429781580|ref|ZP_19313509.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785320|ref|ZP_19317218.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02092]
gi|429791209|ref|ZP_19323066.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02093]
gi|429797036|ref|ZP_19328844.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02281]
gi|429798634|ref|ZP_19330435.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02318]
gi|429807147|ref|ZP_19338874.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02913]
gi|429812047|ref|ZP_19343733.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-03439]
gi|429817567|ref|ZP_19349208.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-04080]
gi|429822778|ref|ZP_19354376.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-03943]
gi|429904158|ref|ZP_19370137.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908295|ref|ZP_19374259.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914166|ref|ZP_19380114.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919197|ref|ZP_19385129.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925016|ref|ZP_19390930.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429928953|ref|ZP_19394855.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935492|ref|ZP_19401378.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941172|ref|ZP_19407046.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429943852|ref|ZP_19409715.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951452|ref|ZP_19417298.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429954764|ref|ZP_19420596.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432377332|ref|ZP_19620323.1| pyrimidine kinase [Escherichia coli KTE12]
gi|432481533|ref|ZP_19723490.1| pyrimidine kinase [Escherichia coli KTE210]
gi|432526937|ref|ZP_19764031.1| pyrimidine kinase [Escherichia coli KTE233]
gi|432675279|ref|ZP_19910739.1| pyrimidine kinase [Escherichia coli KTE142]
gi|432750646|ref|ZP_19985250.1| pyrimidine kinase [Escherichia coli KTE29]
gi|432765557|ref|ZP_19999995.1| pyrimidine kinase [Escherichia coli KTE48]
gi|432806321|ref|ZP_20040249.1| pyrimidine kinase [Escherichia coli KTE91]
gi|432835150|ref|ZP_20068689.1| pyrimidine kinase [Escherichia coli KTE136]
gi|432934955|ref|ZP_20134392.1| pyrimidine kinase [Escherichia coli KTE184]
gi|433092552|ref|ZP_20278819.1| pyrimidine kinase [Escherichia coli KTE138]
gi|433194242|ref|ZP_20378232.1| pyrimidine kinase [Escherichia coli KTE90]
gi|73856159|gb|AAZ88866.1| putative kinase [Shigella sonnei Ss046]
gi|190904528|gb|EDV64235.1| kinase, pfkB family [Escherichia coli B7A]
gi|192931940|gb|EDV84539.1| kinase, pfkB family [Escherichia coli E22]
gi|192955603|gb|EDV86080.1| kinase, pfkB family [Escherichia coli E110019]
gi|194414855|gb|EDX31126.1| kinase, pfkB family [Escherichia coli B171]
gi|209912878|dbj|BAG77952.1| putative kinase [Escherichia coli SE11]
gi|218352506|emb|CAU98283.1| putative kinase [Escherichia coli 55989]
gi|218361496|emb|CAQ99085.1| putative kinase [Escherichia coli IAI1]
gi|257754782|dbj|BAI26284.1| predicted kinase [Escherichia coli O26:H11 str. 11368]
gi|257759913|dbj|BAI31410.1| predicted kinase [Escherichia coli O103:H2 str. 12009]
gi|291323340|gb|EFE62768.1| hypothetical protein ECCG_00658 [Escherichia coli B088]
gi|300524810|gb|EFK45879.1| kinase, PfkB family [Escherichia coli MS 119-7]
gi|300528299|gb|EFK49361.1| kinase, PfkB family [Escherichia coli MS 107-1]
gi|308123327|gb|EFO60589.1| kinase, PfkB family [Escherichia coli MS 145-7]
gi|323152197|gb|EFZ38487.1| hypothetical protein ECEPECA14_5807 [Escherichia coli EPECa14]
gi|323161706|gb|EFZ47588.1| hypothetical protein ECE128010_2033 [Escherichia coli E128010]
gi|323168698|gb|EFZ54378.1| hypothetical protein SS53G_1027 [Shigella sonnei 53G]
gi|323171811|gb|EFZ57455.1| hypothetical protein ECLT68_3451 [Escherichia coli LT-68]
gi|323184217|gb|EFZ69594.1| hypothetical protein ECOK1357_2488 [Escherichia coli OK1357]
gi|323944976|gb|EGB41041.1| pfkB family protein carbohydrate kinase [Escherichia coli H120]
gi|324020631|gb|EGB89850.1| kinase, PfkB family [Escherichia coli MS 117-3]
gi|324118000|gb|EGC11899.1| pfkB family protein carbohydrate kinase [Escherichia coli E1167]
gi|331064053|gb|EGI35964.1| putative kinase [Escherichia coli TA271]
gi|331074569|gb|EGI45889.1| putative kinase [Escherichia coli H591]
gi|332101036|gb|EGJ04382.1| conserved hypothetical protein [Shigella sp. D9]
gi|340734350|gb|EGR63480.1| putative kinase [Escherichia coli O104:H4 str. 01-09591]
gi|340739638|gb|EGR73870.1| putative kinase [Escherichia coli O104:H4 str. LB226692]
gi|341916803|gb|EGT66420.1| yeiI [Escherichia coli O104:H4 str. C227-11]
gi|342928947|gb|EGU97669.1| sugar kinase, ribokinase family [Escherichia coli MS 79-10]
gi|345337442|gb|EGW69874.1| hypothetical protein ECSTECB2F1_2335 [Escherichia coli STEC_B2F1]
gi|345377013|gb|EGX08945.1| hypothetical protein ECSTECH18_2806 [Escherichia coli STEC_H.1.8]
gi|354862012|gb|EHF22450.1| hypothetical protein EUBG_02828 [Escherichia coli O104:H4 str.
C236-11]
gi|354867297|gb|EHF27719.1| hypothetical protein EUAG_03401 [Escherichia coli O104:H4 str.
C227-11]
gi|354869368|gb|EHF29778.1| hypothetical protein EUDG_01405 [Escherichia coli O104:H4 str.
04-8351]
gi|354873223|gb|EHF33600.1| hypothetical protein EUEG_02669 [Escherichia coli O104:H4 str.
09-7901]
gi|354879977|gb|EHF40313.1| hypothetical protein EUFG_02820 [Escherichia coli O104:H4 str.
11-3677]
gi|354889401|gb|EHF49650.1| hypothetical protein EUHG_02831 [Escherichia coli O104:H4 str.
11-4404]
gi|354892996|gb|EHF53200.1| hypothetical protein EUIG_02833 [Escherichia coli O104:H4 str.
11-4522]
gi|354895133|gb|EHF55322.1| hypothetical protein EUKG_02812 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354897407|gb|EHF57565.1| hypothetical protein EUJG_01468 [Escherichia coli O104:H4 str.
11-4623]
gi|354898768|gb|EHF58919.1| hypothetical protein EULG_02829 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354912819|gb|EHF72817.1| hypothetical protein EUOG_02837 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354915824|gb|EHF75800.1| hypothetical protein EUMG_02401 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354917739|gb|EHF77701.1| hypothetical protein EUNG_03639 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|378054103|gb|EHW16389.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8C]
gi|378062692|gb|EHW24869.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC8D]
gi|378074860|gb|EHW36889.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9A]
gi|378077371|gb|EHW39365.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9B]
gi|378084311|gb|EHW46223.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9C]
gi|378090957|gb|EHW52792.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9D]
gi|378095289|gb|EHW57077.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC9E]
gi|378100506|gb|EHW62202.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10A]
gi|378111455|gb|EHW73039.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10C]
gi|378116708|gb|EHW78228.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10D]
gi|378128064|gb|EHW89449.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10E]
gi|378129904|gb|EHW91274.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11A]
gi|378132015|gb|EHW93368.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC10F]
gi|378142517|gb|EHX03719.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11B]
gi|378149007|gb|EHX10140.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11D]
gi|378150506|gb|EHX11621.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11C]
gi|378157656|gb|EHX18687.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC11E]
gi|378164687|gb|EHX25628.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12B]
gi|378169021|gb|EHX29921.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12A]
gi|378169891|gb|EHX30777.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12C]
gi|378182219|gb|EHX42872.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12D]
gi|378186938|gb|EHX47559.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13A]
gi|378187521|gb|EHX48132.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC12E]
gi|378200416|gb|EHX60871.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13B]
gi|378200983|gb|EHX61436.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13C]
gi|378203184|gb|EHX63608.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13D]
gi|378213120|gb|EHX73439.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC13E]
gi|378220154|gb|EHX80420.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14B]
gi|378227771|gb|EHX87939.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14C]
gi|378231238|gb|EHX91349.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14D]
gi|378237454|gb|EHX97477.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15A]
gi|378243415|gb|EHY03361.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15B]
gi|378247170|gb|EHY07089.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15C]
gi|378254134|gb|EHY13998.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15D]
gi|378258771|gb|EHY18587.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC15E]
gi|383103590|gb|AFG41099.1| Putative kinase [Escherichia coli P12b]
gi|383475138|gb|EID67106.1| kinase, PfkB family [Escherichia coli W26]
gi|384473179|gb|EIE57223.1| kinase, PfkB family [Escherichia coli AI27]
gi|385712091|gb|EIG49046.1| hypothetical protein ESTG_00683 [Escherichia coli B799]
gi|386152648|gb|EIH03937.1| HTH domain protein [Escherichia coli 5.0588]
gi|386163795|gb|EIH25590.1| HTH domain protein [Escherichia coli 1.2264]
gi|386167462|gb|EIH33978.1| HTH domain protein [Escherichia coli 96.0497]
gi|386175137|gb|EIH47129.1| HTH domain protein [Escherichia coli 99.0741]
gi|386178802|gb|EIH56281.1| HTH domain protein [Escherichia coli 3.2608]
gi|386184321|gb|EIH67060.1| HTH domain protein [Escherichia coli 93.0624]
gi|386201792|gb|EII00783.1| HTH domain protein [Escherichia coli 96.154]
gi|386215954|gb|EII32446.1| HTH domain protein [Escherichia coli 4.0967]
gi|386228222|gb|EII55578.1| HTH domain protein [Escherichia coli 3.3884]
gi|386258182|gb|EIJ13664.1| HTH domain protein [Escherichia coli 900105 (10e)]
gi|388339334|gb|EIL05719.1| putative kinase [Escherichia coli O103:H2 str. CVM9450]
gi|388349538|gb|EIL15016.1| putative kinase [Escherichia coli O111:H11 str. CVM9534]
gi|388363696|gb|EIL27603.1| putative kinase [Escherichia coli O111:H11 str. CVM9545]
gi|388374125|gb|EIL37327.1| putative kinase [Escherichia coli O26:H11 str. CVM9942]
gi|388378992|gb|EIL41684.1| hypothetical protein ECO10026_01518 [Escherichia coli O26:H11 str.
CVM10026]
gi|391281904|gb|EIQ40541.1| pfkB carbohydrate kinase family protein [Shigella sonnei 3226-85]
gi|391284510|gb|EIQ43105.1| pfkB carbohydrate kinase family protein [Shigella sonnei 3233-85]
gi|391294113|gb|EIQ52366.1| pfkB carbohydrate kinase family protein [Shigella sonnei 4822-66]
gi|391312567|gb|EIQ70175.1| pfkB carbohydrate kinase family protein [Escherichia coli EPEC
C342-62]
gi|394386332|gb|EJE63838.1| kinase [Escherichia coli O26:H11 str. CVM10224]
gi|394401397|gb|EJE77210.1| putative kinase [Escherichia coli O26:H11 str. CVM10021]
gi|394410998|gb|EJE85312.1| putative kinase [Escherichia coli O111:H11 str. CVM9455]
gi|394416202|gb|EJE90009.1| putative kinase [Escherichia coli O111:H11 str. CVM9553]
gi|394426389|gb|EJE99232.1| putative kinase [Escherichia coli O26:H11 str. CVM9952]
gi|394427293|gb|EJF00009.1| putative kinase [Escherichia coli O26:H11 str. CVM10030]
gi|397784726|gb|EJK95579.1| hypothetical protein ECSTECO31_2389 [Escherichia coli STEC_O31]
gi|397899365|gb|EJL15739.1| pfkB carbohydrate kinase family protein [Shigella sonnei str.
Moseley]
gi|406776994|gb|AFS56418.1| putative kinase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053582|gb|AFS73633.1| putative kinase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066087|gb|AFS87134.1| putative kinase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408296560|gb|EKJ14786.1| putative kinase [Escherichia coli EC1865]
gi|421943072|gb|EKU00370.1| kinase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421943550|gb|EKU00833.1| kinase [Escherichia coli O111:H11 str. CFSAN001630]
gi|429346157|gb|EKY82938.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429348909|gb|EKY85665.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02092]
gi|429361131|gb|EKY97788.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02030]
gi|429362562|gb|EKY99209.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02093]
gi|429362833|gb|EKY99478.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02281]
gi|429365951|gb|EKZ02563.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02318]
gi|429376806|gb|EKZ13334.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-02913]
gi|429379280|gb|EKZ15781.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-03439]
gi|429380848|gb|EKZ17337.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-03943]
gi|429393069|gb|EKZ29468.1| pyrimidine kinase [Escherichia coli O104:H4 str. 11-04080]
gi|429405170|gb|EKZ41436.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406936|gb|EKZ43190.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410684|gb|EKZ46905.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414396|gb|EKZ50571.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421005|gb|EKZ57127.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429429339|gb|EKZ65408.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432026|gb|EKZ68066.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436232|gb|EKZ72248.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438437|gb|EKZ74430.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448059|gb|EKZ83976.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451777|gb|EKZ87665.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429457721|gb|EKZ93559.1| pyrimidine kinase [Escherichia coli O104:H4 str. Ec12-0466]
gi|430898631|gb|ELC20764.1| pyrimidine kinase [Escherichia coli KTE12]
gi|431006905|gb|ELD21874.1| pyrimidine kinase [Escherichia coli KTE210]
gi|431063595|gb|ELD72834.1| pyrimidine kinase [Escherichia coli KTE233]
gi|431214255|gb|ELF12080.1| pyrimidine kinase [Escherichia coli KTE142]
gi|431296628|gb|ELF86339.1| pyrimidine kinase [Escherichia coli KTE29]
gi|431309732|gb|ELF97925.1| pyrimidine kinase [Escherichia coli KTE48]
gi|431354463|gb|ELG41189.1| pyrimidine kinase [Escherichia coli KTE91]
gi|431385510|gb|ELG69497.1| pyrimidine kinase [Escherichia coli KTE136]
gi|431453123|gb|ELH33533.1| pyrimidine kinase [Escherichia coli KTE184]
gi|431609882|gb|ELI79187.1| pyrimidine kinase [Escherichia coli KTE138]
gi|431715692|gb|ELJ79837.1| pyrimidine kinase [Escherichia coli KTE90]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|26248543|ref|NP_754583.1| hypothetical protein c2695 [Escherichia coli CFT073]
gi|222156916|ref|YP_002557055.1| sugar kinase yeiI [Escherichia coli LF82]
gi|227887216|ref|ZP_04005021.1| PfkB family carbohydrate kinase [Escherichia coli 83972]
gi|300982878|ref|ZP_07176342.1| kinase, PfkB family [Escherichia coli MS 45-1]
gi|301048899|ref|ZP_07195892.1| kinase, PfkB family [Escherichia coli MS 185-1]
gi|306814725|ref|ZP_07448887.1| hypothetical protein ECNC101_21827 [Escherichia coli NC101]
gi|331647812|ref|ZP_08348904.1| putative kinase [Escherichia coli M605]
gi|386619778|ref|YP_006139358.1| putative sugar kinase [Escherichia coli NA114]
gi|386629952|ref|YP_006149672.1| hypothetical protein i02_2494 [Escherichia coli str. 'clone D i2']
gi|386634872|ref|YP_006154591.1| hypothetical protein i14_2494 [Escherichia coli str. 'clone D i14']
gi|386639737|ref|YP_006106535.1| sugar kinase YeiI [Escherichia coli ABU 83972]
gi|387617520|ref|YP_006120542.1| hypothetical protein NRG857_10970 [Escherichia coli O83:H1 str. NRG
857C]
gi|387830095|ref|YP_003350032.1| putative kinase [Escherichia coli SE15]
gi|417286439|ref|ZP_12073728.1| HTH domain protein [Escherichia coli TW07793]
gi|417662776|ref|ZP_12312357.1| uncharacterized sugar kinase YeiI [Escherichia coli AA86]
gi|419700997|ref|ZP_14228599.1| putative kinase [Escherichia coli SCI-07]
gi|422362766|ref|ZP_16443318.1| kinase, PfkB family [Escherichia coli MS 153-1]
gi|422382262|ref|ZP_16462423.1| kinase, PfkB family [Escherichia coli MS 57-2]
gi|432381901|ref|ZP_19624844.1| pyrimidine kinase [Escherichia coli KTE15]
gi|432387713|ref|ZP_19630602.1| pyrimidine kinase [Escherichia coli KTE16]
gi|432397989|ref|ZP_19640770.1| pyrimidine kinase [Escherichia coli KTE25]
gi|432407217|ref|ZP_19649926.1| pyrimidine kinase [Escherichia coli KTE28]
gi|432412374|ref|ZP_19655037.1| pyrimidine kinase [Escherichia coli KTE39]
gi|432422508|ref|ZP_19665053.1| pyrimidine kinase [Escherichia coli KTE178]
gi|432432449|ref|ZP_19674878.1| pyrimidine kinase [Escherichia coli KTE187]
gi|432436887|ref|ZP_19679275.1| pyrimidine kinase [Escherichia coli KTE188]
gi|432441657|ref|ZP_19683997.1| pyrimidine kinase [Escherichia coli KTE189]
gi|432446771|ref|ZP_19689070.1| pyrimidine kinase [Escherichia coli KTE191]
gi|432457268|ref|ZP_19699452.1| pyrimidine kinase [Escherichia coli KTE201]
gi|432496268|ref|ZP_19738064.1| pyrimidine kinase [Escherichia coli KTE214]
gi|432500648|ref|ZP_19742405.1| pyrimidine kinase [Escherichia coli KTE216]
gi|432504990|ref|ZP_19746714.1| pyrimidine kinase [Escherichia coli KTE220]
gi|432514463|ref|ZP_19751687.1| pyrimidine kinase [Escherichia coli KTE224]
gi|432524359|ref|ZP_19761487.1| pyrimidine kinase [Escherichia coli KTE230]
gi|432554250|ref|ZP_19790973.1| pyrimidine kinase [Escherichia coli KTE47]
gi|432559411|ref|ZP_19796080.1| pyrimidine kinase [Escherichia coli KTE49]
gi|432569241|ref|ZP_19805753.1| pyrimidine kinase [Escherichia coli KTE53]
gi|432593427|ref|ZP_19829744.1| pyrimidine kinase [Escherichia coli KTE60]
gi|432608048|ref|ZP_19844233.1| pyrimidine kinase [Escherichia coli KTE67]
gi|432611970|ref|ZP_19848132.1| pyrimidine kinase [Escherichia coli KTE72]
gi|432646732|ref|ZP_19882522.1| pyrimidine kinase [Escherichia coli KTE86]
gi|432651716|ref|ZP_19887470.1| pyrimidine kinase [Escherichia coli KTE87]
gi|432656315|ref|ZP_19892019.1| pyrimidine kinase [Escherichia coli KTE93]
gi|432695023|ref|ZP_19930222.1| pyrimidine kinase [Escherichia coli KTE162]
gi|432699592|ref|ZP_19934746.1| pyrimidine kinase [Escherichia coli KTE169]
gi|432711212|ref|ZP_19946272.1| pyrimidine kinase [Escherichia coli KTE6]
gi|432723613|ref|ZP_19958533.1| pyrimidine kinase [Escherichia coli KTE17]
gi|432728200|ref|ZP_19963079.1| pyrimidine kinase [Escherichia coli KTE18]
gi|432732895|ref|ZP_19967728.1| pyrimidine kinase [Escherichia coli KTE45]
gi|432741894|ref|ZP_19976613.1| pyrimidine kinase [Escherichia coli KTE23]
gi|432746203|ref|ZP_19980869.1| pyrimidine kinase [Escherichia coli KTE43]
gi|432759981|ref|ZP_19994475.1| pyrimidine kinase [Escherichia coli KTE46]
gi|432784109|ref|ZP_20018288.1| pyrimidine kinase [Escherichia coli KTE63]
gi|432845131|ref|ZP_20077964.1| pyrimidine kinase [Escherichia coli KTE141]
gi|432905420|ref|ZP_20114287.1| pyrimidine kinase [Escherichia coli KTE194]
gi|432919626|ref|ZP_20123740.1| pyrimidine kinase [Escherichia coli KTE173]
gi|432927528|ref|ZP_20128957.1| pyrimidine kinase [Escherichia coli KTE175]
gi|432938512|ref|ZP_20136790.1| pyrimidine kinase [Escherichia coli KTE183]
gi|432972364|ref|ZP_20161231.1| pyrimidine kinase [Escherichia coli KTE207]
gi|432974309|ref|ZP_20163148.1| pyrimidine kinase [Escherichia coli KTE209]
gi|432981590|ref|ZP_20170365.1| pyrimidine kinase [Escherichia coli KTE211]
gi|432985920|ref|ZP_20174643.1| pyrimidine kinase [Escherichia coli KTE215]
gi|432991201|ref|ZP_20179865.1| pyrimidine kinase [Escherichia coli KTE217]
gi|432995897|ref|ZP_20184502.1| pyrimidine kinase [Escherichia coli KTE218]
gi|433000466|ref|ZP_20188991.1| pyrimidine kinase [Escherichia coli KTE223]
gi|433014426|ref|ZP_20202774.1| pyrimidine kinase [Escherichia coli KTE104]
gi|433024044|ref|ZP_20212032.1| pyrimidine kinase [Escherichia coli KTE106]
gi|433039161|ref|ZP_20226760.1| pyrimidine kinase [Escherichia coli KTE113]
gi|433058680|ref|ZP_20245726.1| pyrimidine kinase [Escherichia coli KTE124]
gi|433083119|ref|ZP_20269576.1| pyrimidine kinase [Escherichia coli KTE133]
gi|433087841|ref|ZP_20274212.1| pyrimidine kinase [Escherichia coli KTE137]
gi|433097032|ref|ZP_20283216.1| pyrimidine kinase [Escherichia coli KTE139]
gi|433101707|ref|ZP_20287793.1| pyrimidine kinase [Escherichia coli KTE145]
gi|433106454|ref|ZP_20292429.1| pyrimidine kinase [Escherichia coli KTE148]
gi|433111412|ref|ZP_20297277.1| pyrimidine kinase [Escherichia coli KTE150]
gi|433116095|ref|ZP_20301886.1| pyrimidine kinase [Escherichia coli KTE153]
gi|433125745|ref|ZP_20311304.1| pyrimidine kinase [Escherichia coli KTE160]
gi|433139814|ref|ZP_20325070.1| pyrimidine kinase [Escherichia coli KTE167]
gi|433144751|ref|ZP_20329895.1| pyrimidine kinase [Escherichia coli KTE168]
gi|433149731|ref|ZP_20334752.1| pyrimidine kinase [Escherichia coli KTE174]
gi|433188944|ref|ZP_20373042.1| pyrimidine kinase [Escherichia coli KTE88]
gi|433198796|ref|ZP_20382698.1| pyrimidine kinase [Escherichia coli KTE94]
gi|433208336|ref|ZP_20392010.1| pyrimidine kinase [Escherichia coli KTE97]
gi|433213072|ref|ZP_20396662.1| pyrimidine kinase [Escherichia coli KTE99]
gi|442607912|ref|ZP_21022672.1| Uncharacterized sugar kinase YeiI [Escherichia coli Nissle 1917]
gi|26108948|gb|AAN81151.1|AE016763_110 Hypothetical sugar kinase yeiI [Escherichia coli CFT073]
gi|222033921|emb|CAP76662.1| Uncharacterized sugar kinase yeiI [Escherichia coli LF82]
gi|227835566|gb|EEJ46032.1| PfkB family carbohydrate kinase [Escherichia coli 83972]
gi|281179252|dbj|BAI55582.1| putative kinase [Escherichia coli SE15]
gi|300299275|gb|EFJ55660.1| kinase, PfkB family [Escherichia coli MS 185-1]
gi|300408678|gb|EFJ92216.1| kinase, PfkB family [Escherichia coli MS 45-1]
gi|305852119|gb|EFM52571.1| hypothetical protein ECNC101_21827 [Escherichia coli NC101]
gi|307554229|gb|ADN47004.1| hypothetical sugar kinase YeiI [Escherichia coli ABU 83972]
gi|312946781|gb|ADR27608.1| hypothetical protein NRG857_10970 [Escherichia coli O83:H1 str. NRG
857C]
gi|315294472|gb|EFU53820.1| kinase, PfkB family [Escherichia coli MS 153-1]
gi|324006531|gb|EGB75750.1| kinase, PfkB family [Escherichia coli MS 57-2]
gi|330911994|gb|EGH40504.1| uncharacterized sugar kinase YeiI [Escherichia coli AA86]
gi|331043536|gb|EGI15674.1| putative kinase [Escherichia coli M605]
gi|333970279|gb|AEG37084.1| putative sugar kinase [Escherichia coli NA114]
gi|355420851|gb|AER85048.1| hypothetical protein i02_2494 [Escherichia coli str. 'clone D i2']
gi|355425771|gb|AER89967.1| hypothetical protein i14_2494 [Escherichia coli str. 'clone D i14']
gi|380347743|gb|EIA36029.1| putative kinase [Escherichia coli SCI-07]
gi|386249898|gb|EII96067.1| HTH domain protein [Escherichia coli TW07793]
gi|430906361|gb|ELC27961.1| pyrimidine kinase [Escherichia coli KTE16]
gi|430907376|gb|ELC28874.1| pyrimidine kinase [Escherichia coli KTE15]
gi|430916093|gb|ELC37171.1| pyrimidine kinase [Escherichia coli KTE25]
gi|430929976|gb|ELC50485.1| pyrimidine kinase [Escherichia coli KTE28]
gi|430934781|gb|ELC55128.1| pyrimidine kinase [Escherichia coli KTE39]
gi|430944120|gb|ELC64219.1| pyrimidine kinase [Escherichia coli KTE178]
gi|430952874|gb|ELC71788.1| pyrimidine kinase [Escherichia coli KTE187]
gi|430962218|gb|ELC80075.1| pyrimidine kinase [Escherichia coli KTE188]
gi|430966111|gb|ELC83519.1| pyrimidine kinase [Escherichia coli KTE189]
gi|430973044|gb|ELC90012.1| pyrimidine kinase [Escherichia coli KTE191]
gi|430982002|gb|ELC98721.1| pyrimidine kinase [Escherichia coli KTE201]
gi|431023526|gb|ELD36721.1| pyrimidine kinase [Escherichia coli KTE214]
gi|431028225|gb|ELD41269.1| pyrimidine kinase [Escherichia coli KTE216]
gi|431038084|gb|ELD49053.1| pyrimidine kinase [Escherichia coli KTE220]
gi|431041859|gb|ELD52354.1| pyrimidine kinase [Escherichia coli KTE224]
gi|431051475|gb|ELD61138.1| pyrimidine kinase [Escherichia coli KTE230]
gi|431084055|gb|ELD90226.1| pyrimidine kinase [Escherichia coli KTE47]
gi|431090631|gb|ELD96382.1| pyrimidine kinase [Escherichia coli KTE49]
gi|431099955|gb|ELE04971.1| pyrimidine kinase [Escherichia coli KTE53]
gi|431127527|gb|ELE29827.1| pyrimidine kinase [Escherichia coli KTE60]
gi|431137934|gb|ELE39774.1| pyrimidine kinase [Escherichia coli KTE67]
gi|431148144|gb|ELE49435.1| pyrimidine kinase [Escherichia coli KTE72]
gi|431180769|gb|ELE80656.1| pyrimidine kinase [Escherichia coli KTE86]
gi|431190163|gb|ELE89563.1| pyrimidine kinase [Escherichia coli KTE87]
gi|431190785|gb|ELE90171.1| pyrimidine kinase [Escherichia coli KTE93]
gi|431233605|gb|ELF29192.1| pyrimidine kinase [Escherichia coli KTE162]
gi|431243341|gb|ELF37728.1| pyrimidine kinase [Escherichia coli KTE169]
gi|431248892|gb|ELF43067.1| pyrimidine kinase [Escherichia coli KTE6]
gi|431266167|gb|ELF57729.1| pyrimidine kinase [Escherichia coli KTE17]
gi|431273889|gb|ELF64963.1| pyrimidine kinase [Escherichia coli KTE18]
gi|431276082|gb|ELF67109.1| pyrimidine kinase [Escherichia coli KTE45]
gi|431283585|gb|ELF74444.1| pyrimidine kinase [Escherichia coli KTE23]
gi|431291242|gb|ELF81755.1| pyrimidine kinase [Escherichia coli KTE43]
gi|431307635|gb|ELF95925.1| pyrimidine kinase [Escherichia coli KTE46]
gi|431328532|gb|ELG15836.1| pyrimidine kinase [Escherichia coli KTE63]
gi|431394553|gb|ELG78086.1| pyrimidine kinase [Escherichia coli KTE141]
gi|431432655|gb|ELH14332.1| pyrimidine kinase [Escherichia coli KTE194]
gi|431443670|gb|ELH24696.1| pyrimidine kinase [Escherichia coli KTE173]
gi|431444051|gb|ELH25075.1| pyrimidine kinase [Escherichia coli KTE175]
gi|431463247|gb|ELH43440.1| pyrimidine kinase [Escherichia coli KTE183]
gi|431481866|gb|ELH61573.1| pyrimidine kinase [Escherichia coli KTE207]
gi|431489170|gb|ELH68798.1| pyrimidine kinase [Escherichia coli KTE209]
gi|431490899|gb|ELH70506.1| pyrimidine kinase [Escherichia coli KTE211]
gi|431495283|gb|ELH74869.1| pyrimidine kinase [Escherichia coli KTE217]
gi|431500157|gb|ELH79173.1| pyrimidine kinase [Escherichia coli KTE215]
gi|431505457|gb|ELH84063.1| pyrimidine kinase [Escherichia coli KTE218]
gi|431508452|gb|ELH86724.1| pyrimidine kinase [Escherichia coli KTE223]
gi|431530524|gb|ELI07203.1| pyrimidine kinase [Escherichia coli KTE104]
gi|431535737|gb|ELI12076.1| pyrimidine kinase [Escherichia coli KTE106]
gi|431551261|gb|ELI25247.1| pyrimidine kinase [Escherichia coli KTE113]
gi|431568935|gb|ELI41897.1| pyrimidine kinase [Escherichia coli KTE124]
gi|431602011|gb|ELI71520.1| pyrimidine kinase [Escherichia coli KTE133]
gi|431604352|gb|ELI73761.1| pyrimidine kinase [Escherichia coli KTE137]
gi|431615380|gb|ELI84509.1| pyrimidine kinase [Escherichia coli KTE139]
gi|431619301|gb|ELI88225.1| pyrimidine kinase [Escherichia coli KTE145]
gi|431627161|gb|ELI95572.1| pyrimidine kinase [Escherichia coli KTE148]
gi|431628716|gb|ELI97092.1| pyrimidine kinase [Escherichia coli KTE150]
gi|431633857|gb|ELJ02119.1| pyrimidine kinase [Escherichia coli KTE153]
gi|431644979|gb|ELJ12632.1| pyrimidine kinase [Escherichia coli KTE160]
gi|431660127|gb|ELJ27015.1| pyrimidine kinase [Escherichia coli KTE167]
gi|431661446|gb|ELJ28259.1| pyrimidine kinase [Escherichia coli KTE168]
gi|431670400|gb|ELJ36753.1| pyrimidine kinase [Escherichia coli KTE174]
gi|431705650|gb|ELJ70240.1| pyrimidine kinase [Escherichia coli KTE88]
gi|431721500|gb|ELJ85494.1| pyrimidine kinase [Escherichia coli KTE94]
gi|431729621|gb|ELJ93240.1| pyrimidine kinase [Escherichia coli KTE97]
gi|431734097|gb|ELJ97498.1| pyrimidine kinase [Escherichia coli KTE99]
gi|441710517|emb|CCQ08649.1| Uncharacterized sugar kinase YeiI [Escherichia coli Nissle 1917]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|307280537|ref|ZP_07561586.1| putative ribokinase [Enterococcus faecalis TX0860]
gi|306504085|gb|EFM73301.1| putative ribokinase [Enterococcus faecalis TX0860]
Length = 637
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 361 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 420
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 421 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 478
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 479 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 519
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 520 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 552
>gi|297584800|ref|YP_003700580.1| PfkB domain-containing protein [Bacillus selenitireducens MLS10]
gi|297143257|gb|ADI00015.1| PfkB domain protein [Bacillus selenitireducens MLS10]
Length = 373
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE-GIRRQKDIDTAVVS 64
GGVARN+AE +SK+GS+ + + +G D G+ L H + G+ + I R K T
Sbjct: 96 GGVARNIAENLSKMGSEVRLFTVIGADSDGDYLRSHSVNEGIDLQLSIERTK-ASTGNYL 154
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL-AASCKIA 123
+LD +L AVA ++ I +T + ++Q + + S + D NL AL K
Sbjct: 155 AVLDDRHDLVFAVADMD-IYDTVTAEEMKQILTKAGACSWYVTDTNLPKEALNEVFHKKE 213
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
A+ + PVS K RI + I ++ N E +A+ G R D +
Sbjct: 214 AQPETKLAVIPVSAQKLDRIPERPEVIDLLILNRLEALALTERWFG---IRETDEER--- 267
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
AI L+E GIR V++T GS+GVLL
Sbjct: 268 ---------AIRKLIEHGIRQVIITKGSEGVLLME 293
>gi|432584417|ref|ZP_19820811.1| pyrimidine kinase [Escherichia coli KTE57]
gi|431115776|gb|ELE19270.1| pyrimidine kinase [Escherichia coli KTE57]
Length = 362
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|419862625|ref|ZP_14385219.1| putative kinase [Escherichia coli O103:H25 str. CVM9340]
gi|388344765|gb|EIL10589.1| putative kinase [Escherichia coli O103:H25 str. CVM9340]
Length = 362
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|255975533|ref|ZP_05426119.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|255968405|gb|EET99027.1| conserved hypothetical protein [Enterococcus faecalis T2]
Length = 636
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG + +I LG D N L + + ++T+G+ R +D +T
Sbjct: 360 GGKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGVTRIQDAETGQAYI 419
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G+ ++ +I LTP I Q H AS ++ + A+ +C+IA
Sbjct: 420 YVETSGDSMISILPGANIA--LTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQH 477
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ +P ++ ++++ + PNEDEL+ +
Sbjct: 478 SGVPIILKPAAI--HHIPVNILEKVDFFIPNEDELLELQPDTG----------------- 518
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
TL+ LE G++ V++TLG GVLL + ++
Sbjct: 519 ---TLEEKAAYFLEMGVKNVIVTLGKKGVLLKTPQV 551
>gi|110642376|ref|YP_670106.1| hypothetical protein ECP_2206 [Escherichia coli 536]
gi|191170017|ref|ZP_03031571.1| kinase, pfkB family protein [Escherichia coli F11]
gi|432471533|ref|ZP_19713579.1| pseudouridine kinase [Escherichia coli KTE206]
gi|432713945|ref|ZP_19948985.1| pseudouridine kinase [Escherichia coli KTE8]
gi|433078343|ref|ZP_20264881.1| pseudouridine kinase [Escherichia coli KTE131]
gi|110343968|gb|ABG70205.1| hypothetical sugar kinase YeiC [Escherichia coli 536]
gi|190909533|gb|EDV69118.1| kinase, pfkB family protein [Escherichia coli F11]
gi|430997922|gb|ELD14171.1| pseudouridine kinase [Escherichia coli KTE206]
gi|431256722|gb|ELF49657.1| pseudouridine kinase [Escherichia coli KTE8]
gi|431596573|gb|ELI66525.1| pseudouridine kinase [Escherichia coli KTE131]
Length = 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ + E PV+ +PVS K +I + I + PN E A LSG + D K
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLE----AETLSGIALSGREDVAK 207
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
SA F + G+ +VL++G DGV
Sbjct: 208 VSA--WFH----------QHGLNRLVLSMGGDGV 229
>gi|358057657|dbj|GAA96422.1| hypothetical protein E5Q_03089 [Mixia osmundae IAM 14324]
Length = 1013
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 59/319 (18%)
Query: 1 VNYVLGGVARNVAECMSKL--GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKD 57
V + LGGVARNVAE KL G+ +++ + + A +E + G+ + + Q
Sbjct: 351 VKFSLGGVARNVAEAAHKLLPGANVALVAPVNANFASRYAIEAIEQLGMRRDALLPLQTS 410
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI---SSASVLMVDANLSPP 114
V + +LD G L A V + S+E+ +T + I+ ++ + S S+ + DANL P
Sbjct: 411 RGVGVANLLLDSQGLLQAGVVDMTSVEQ-VTAEEIKSKLNDVIDMSKRSIAIFDANLRPE 469
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI-----TSVVKYITVVSPN------------- 156
+A+ E + FEP S+ K+ RI T +++++PN
Sbjct: 470 VIASVLAYCHERGVATLFEPTSLDKASRICHTFQTQRQPRLSMMTPNAIELRRMYDTCRK 529
Query: 157 -----EDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGS 211
ED A + L ++ FR + L Q + P + + + +++ GS
Sbjct: 530 VQLDQEDRWFASIDLLGIDSDFRAKLDRRMPRWMLDQGI-PQQAIFMLAFVDTLLVKCGS 588
Query: 212 DGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHF 271
G L + R P G D + + +F
Sbjct: 589 QGFL-----------VAHRLNGPQGAKEDKHSVIN-----------------EHLMMQYF 620
Query: 272 PALPASVVRLTGAGDCLVG 290
PA+PA +V TGAGD + G
Sbjct: 621 PAVPAEIVNDTGAGDSMAG 639
>gi|432788048|ref|ZP_20022180.1| pyrimidine kinase [Escherichia coli KTE65]
gi|431337765|gb|ELG24853.1| pyrimidine kinase [Escherichia coli KTE65]
Length = 362
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
IP++ + VS K+ ++ + I + P ++EL
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL 244
>gi|91211448|ref|YP_541434.1| hypothetical protein UTI89_C2435 [Escherichia coli UTI89]
gi|117624360|ref|YP_853273.1| hypothetical protein APECO1_4392 [Escherichia coli APEC O1]
gi|218559081|ref|YP_002391994.1| hypothetical protein ECS88_2309 [Escherichia coli S88]
gi|237704628|ref|ZP_04535109.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|386600040|ref|YP_006101546.1| kinase, pfkB family [Escherichia coli IHE3034]
gi|386603815|ref|YP_006110115.1| hypothetical protein UM146_05990 [Escherichia coli UM146]
gi|417085424|ref|ZP_11952852.1| hypothetical protein i01_02985 [Escherichia coli cloneA_i1]
gi|419947091|ref|ZP_14463453.1| hypothetical protein ECHM605_23374 [Escherichia coli HM605]
gi|422360404|ref|ZP_16441038.1| kinase, PfkB family [Escherichia coli MS 110-3]
gi|422749441|ref|ZP_16803353.1| pfkB family protein carbohydrate kinase [Escherichia coli H252]
gi|422755584|ref|ZP_16809408.1| pfkB family protein carbohydrate kinase [Escherichia coli H263]
gi|422837784|ref|ZP_16885757.1| hypothetical protein ESPG_00443 [Escherichia coli H397]
gi|432358506|ref|ZP_19601732.1| pyrimidine kinase [Escherichia coli KTE4]
gi|432363239|ref|ZP_19606406.1| pyrimidine kinase [Escherichia coli KTE5]
gi|432574241|ref|ZP_19810721.1| pyrimidine kinase [Escherichia coli KTE55]
gi|432588489|ref|ZP_19824845.1| pyrimidine kinase [Escherichia coli KTE58]
gi|432598148|ref|ZP_19834424.1| pyrimidine kinase [Escherichia coli KTE62]
gi|432754976|ref|ZP_19989526.1| pyrimidine kinase [Escherichia coli KTE22]
gi|432779101|ref|ZP_20013344.1| pyrimidine kinase [Escherichia coli KTE59]
gi|432821497|ref|ZP_20055189.1| pyrimidine kinase [Escherichia coli KTE118]
gi|432827629|ref|ZP_20061281.1| pyrimidine kinase [Escherichia coli KTE123]
gi|433005619|ref|ZP_20194048.1| pyrimidine kinase [Escherichia coli KTE227]
gi|433008202|ref|ZP_20196619.1| pyrimidine kinase [Escherichia coli KTE229]
gi|433154281|ref|ZP_20339224.1| pyrimidine kinase [Escherichia coli KTE176]
gi|433164036|ref|ZP_20348774.1| pyrimidine kinase [Escherichia coli KTE179]
gi|433169141|ref|ZP_20353769.1| pyrimidine kinase [Escherichia coli KTE180]
gi|91073022|gb|ABE07903.1| hypothetical sugar kinase YeiI [Escherichia coli UTI89]
gi|115513484|gb|ABJ01559.1| putative sugar kinase YeiI [Escherichia coli APEC O1]
gi|218365850|emb|CAR03591.1| putative kinase [Escherichia coli S88]
gi|226900994|gb|EEH87253.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490132|gb|ADE88888.1| kinase, pfkB family [Escherichia coli IHE3034]
gi|307626299|gb|ADN70603.1| hypothetical protein UM146_05990 [Escherichia coli UM146]
gi|315285766|gb|EFU45206.1| kinase, PfkB family [Escherichia coli MS 110-3]
gi|323951956|gb|EGB47830.1| pfkB family protein carbohydrate kinase [Escherichia coli H252]
gi|323955928|gb|EGB51681.1| pfkB family protein carbohydrate kinase [Escherichia coli H263]
gi|355351196|gb|EHG00388.1| hypothetical protein i01_02985 [Escherichia coli cloneA_i1]
gi|371610693|gb|EHN99221.1| hypothetical protein ESPG_00443 [Escherichia coli H397]
gi|388411528|gb|EIL71697.1| hypothetical protein ECHM605_23374 [Escherichia coli HM605]
gi|430877161|gb|ELC00617.1| pyrimidine kinase [Escherichia coli KTE4]
gi|430886458|gb|ELC09313.1| pyrimidine kinase [Escherichia coli KTE5]
gi|431107839|gb|ELE12003.1| pyrimidine kinase [Escherichia coli KTE55]
gi|431120822|gb|ELE23820.1| pyrimidine kinase [Escherichia coli KTE58]
gi|431131015|gb|ELE33098.1| pyrimidine kinase [Escherichia coli KTE62]
gi|431302185|gb|ELF91373.1| pyrimidine kinase [Escherichia coli KTE22]
gi|431327254|gb|ELG14599.1| pyrimidine kinase [Escherichia coli KTE59]
gi|431368344|gb|ELG54812.1| pyrimidine kinase [Escherichia coli KTE118]
gi|431372878|gb|ELG58540.1| pyrimidine kinase [Escherichia coli KTE123]
gi|431514606|gb|ELH92447.1| pyrimidine kinase [Escherichia coli KTE227]
gi|431523532|gb|ELI00669.1| pyrimidine kinase [Escherichia coli KTE229]
gi|431674171|gb|ELJ40354.1| pyrimidine kinase [Escherichia coli KTE176]
gi|431687341|gb|ELJ52892.1| pyrimidine kinase [Escherichia coli KTE179]
gi|431687993|gb|ELJ53534.1| pyrimidine kinase [Escherichia coli KTE180]
Length = 362
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
IP++ + VS K+ ++ + I + P ++EL
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL 244
>gi|308452310|ref|XP_003088996.1| hypothetical protein CRE_02750 [Caenorhabditis remanei]
gi|308244039|gb|EFO87991.1| hypothetical protein CRE_02750 [Caenorhabditis remanei]
Length = 856
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN AE + +LG ISA+G D G ++ + ++ + K T +
Sbjct: 573 MGGVARNHAEALGRLGCDSIFISAIGDDSNGQFFRQNSEKMDITRIKVITNKPTCTYLAV 632
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
N V G + + + E + LTP I++ + ++ +++D+NL P + +IA
Sbjct: 633 N---VRGNVKYGIVTSEPLLSTLTPALIKKNEDVLETSDFILLDSNLPVPLMTKVLEIAK 689
Query: 125 ECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ VW EP + K +++ T +V +T SPN +E + A
Sbjct: 690 KHEKQVWLEPTDIDKVKKVFSTGLVDAVTATSPNANEFLEWA 731
>gi|422804815|ref|ZP_16853247.1| pfkB family protein carbohydrate kinase [Escherichia fergusonii
B253]
gi|324114418|gb|EGC08387.1| pfkB family protein carbohydrate kinase [Escherichia fergusonii
B253]
Length = 313
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ +++ Q I A+V++ D NLS A+A
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISDCISAEFLSQHQEFIRGANVIVADCNLSEDAMAWVM 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ A + PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 QNAGD--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVADW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|432832191|ref|ZP_20065765.1| pyrimidine kinase [Escherichia coli KTE135]
gi|431376161|gb|ELG61484.1| pyrimidine kinase [Escherichia coli KTE135]
Length = 362
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
IP++ + VS K+ ++ + I + P ++EL
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL 244
>gi|331653590|ref|ZP_08354591.1| putative kinase [Escherichia coli M718]
gi|331048439|gb|EGI20515.1| putative kinase [Escherichia coli M718]
Length = 362
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|416343723|ref|ZP_11677623.1| Uncharacterized sugar kinase YeiI [Escherichia coli EC4100B]
gi|320199755|gb|EFW74344.1| Uncharacterized sugar kinase YeiI [Escherichia coli EC4100B]
Length = 362
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNASRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|50550475|ref|XP_502710.1| YALI0D11682p [Yarrowia lipolytica]
gi|49648578|emb|CAG80898.1| YALI0D11682p [Yarrowia lipolytica CLIB122]
Length = 404
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 135/332 (40%), Gaps = 55/332 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSK----PYMISALGLDMAGNILLEHWKSAGLSTEGIRRQK 56
V +GGV N+ + GSK P +ISA+G D GN +L H + GL T GI++
Sbjct: 47 VTNSIGGVGHNIVLAIHYTGSKHGISPRLISAVGQDGDGNEILSHMEKVGLDTSGIKQDS 106
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
TA + D NG+L A A ++ I+ +Q + +M+D N+ A
Sbjct: 107 KEGTARYVAMHDKNGDLVVACADMDIIQNLDVVHIGQQLT--TAQPKWIMMDGNIGLEAK 164
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSV------VKYITVVSPNEDELVAMANALSGE 170
K A + + V FEP SV K+ ++ + I + +PN EL AM A +
Sbjct: 165 KEVLKYARDKSAQVAFEPTSVPKAAALSELNLPVYPNNSIALATPNTAELEAMFEAFHEK 224
Query: 171 NMFRPID-----------RNKHSAESLFQTLKPAILVLLEKG-----------IRLVVLT 208
F D + + ++ + +LE+G I +++
Sbjct: 225 GRFDVDDWFPVIDGLALGADFRNGATMLSHQHRGLKAILEQGTLAQAIHMLPYIPTLIIK 284
Query: 209 LGSDGVLLCS-----KELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAG- 262
G++GV++ + + S R KT P F + + Y EP
Sbjct: 285 GGANGVVVFQLIDDIESAIHSQRSASNKT-PGLFQKG--NAASGNTKVGVYMQYFEPEEV 341
Query: 263 GSQFFAVHFPALPASVVRLTGAGDCLVGGTLA 294
GSQ S+V +TGAGD L GTLA
Sbjct: 342 GSQ-----------SIVSVTGAGDTLF-GTLA 361
>gi|89097359|ref|ZP_01170249.1| carbohydrate kinase, PfkB family protein [Bacillus sp. NRRL
B-14911]
gi|89088182|gb|EAR67293.1| carbohydrate kinase, PfkB family protein [Bacillus sp. NRRL
B-14911]
Length = 365
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG +++A+G D G+ LL + K + + + T +
Sbjct: 93 GGVARNIAENLGRLGCDASLMTAVGDDAEGSWLLGYTKDF-VDISPSQTLPNTATGTYTA 151
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GE+ A A + ++ + ++I + +I+SA ++++D N L + E
Sbjct: 152 VLDHDGEMTVAFADM-ALYDSIDSEFIEKRWGYIASAEIVLLDTNFPAEVLKKTISRCYE 210
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
++P+ PVS K +++ + +T + N DE A LSG + +S
Sbjct: 211 ESVPLCITPVSSPKVKKLPENLMGVTWLIANHDE----AETLSGMKI--------NSDGD 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
F+ + +++KG+ VV+T G G++ +KE
Sbjct: 259 FFKAAEK----IMKKGVEKVVITRGDKGLIFYTKE 289
>gi|325839418|ref|ZP_08166857.1| kinase, PfkB family [Turicibacter sp. HGF1]
gi|325490538|gb|EGC92854.1| kinase, PfkB family [Turicibacter sp. HGF1]
Length = 317
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 33/222 (14%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G IS LG D G +LEH KS + T
Sbjct: 41 FGGVCRNIAENMARVGGNTKFISILGNDEKGKSILEHAKSMNFDMSDSLVVEGASTPTYV 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +A+ + +I+ + +I I SA + A+ +P + K A
Sbjct: 101 AILDENGEMVSAIVDI-NIDHHMDAAFIDSKASVIESAEYMFFGAD-NPECIEYIVKKYA 158
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+PVS K++ I ++ Y V P N+H AE
Sbjct: 159 -GKTKFVLDPVSAAKAKNIKHLLPYFHTVKP-----------------------NRHEAE 194
Query: 185 SL-------FQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L + ++ A +E G+ V ++L +DGV C++
Sbjct: 195 VLCDCEIKTIEDVRRAGAYFMEVGVENVFISLDADGVYYCNQ 236
>gi|221195037|ref|ZP_03568093.1| kinase, PfkB family [Atopobium rimae ATCC 49626]
gi|221184940|gb|EEE17331.1| kinase, PfkB family [Atopobium rimae ATCC 49626]
Length = 360
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%), Gaps = 22/228 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LGSK +++A G D L + + + + T+
Sbjct: 94 GGVGRNIAHNLALLGSKVRLLTAFGQDANAQELKDGCCAVHVDIDPSMTIPGEPTSTYLF 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I++ +GE+ A+A ++ I ++LTP+ + + + I A+ +++D NL L +A
Sbjct: 154 IMNEHGEMQLAIADMD-IYRYLTPERMEERMDLIDHAAAVVIDTNLPQETLR---YLADH 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P+ +PVS TK+++I ++ + PN E A LSG + H S
Sbjct: 210 VSAPIICDPVSTTKAKKIRHLIGRFHTLKPNRLE----AELLSGVTI--------HDDAS 257
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
L + K LL+ G++ V ++LGS+G L C+ + + ++ L +TK
Sbjct: 258 LERAAKE----LLDTGLKRVFISLGSEG-LYCA-DANEAFKLPLHETK 299
>gi|26248547|ref|NP_754587.1| hypothetical protein c2701 [Escherichia coli CFT073]
gi|91211453|ref|YP_541439.1| hypothetical protein UTI89_C2440 [Escherichia coli UTI89]
gi|117624365|ref|YP_853278.1| hypothetical protein APECO1_4388 [Escherichia coli APEC O1]
gi|218559086|ref|YP_002391999.1| hypothetical protein ECS88_2314 [Escherichia coli S88]
gi|218690316|ref|YP_002398528.1| hypothetical protein ECED1_2614 [Escherichia coli ED1a]
gi|227887221|ref|ZP_04005026.1| possible kinase [Escherichia coli 83972]
gi|237704634|ref|ZP_04535115.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300982883|ref|ZP_07176347.1| kinase, PfkB family [Escherichia coli MS 45-1]
gi|301048904|ref|ZP_07195897.1| kinase, PfkB family [Escherichia coli MS 185-1]
gi|386629958|ref|YP_006149678.1| hypothetical protein i02_2501 [Escherichia coli str. 'clone D i2']
gi|386634878|ref|YP_006154597.1| hypothetical protein i14_2501 [Escherichia coli str. 'clone D i14']
gi|422360399|ref|ZP_16441033.1| kinase, PfkB family [Escherichia coli MS 110-3]
gi|422362761|ref|ZP_16443313.1| kinase, PfkB family [Escherichia coli MS 153-1]
gi|422370271|ref|ZP_16450665.1| kinase, PfkB family [Escherichia coli MS 16-3]
gi|26108952|gb|AAN81155.1|AE016763_114 Hypothetical sugar kinase yeiC [Escherichia coli CFT073]
gi|91073027|gb|ABE07908.1| hypothetical sugar kinase YeiC [Escherichia coli UTI89]
gi|115513489|gb|ABJ01564.1| putative sugar kinase [Escherichia coli APEC O1]
gi|218365855|emb|CAR03596.1| putative kinase [Escherichia coli S88]
gi|218427880|emb|CAR08795.2| putative kinase [Escherichia coli ED1a]
gi|226901000|gb|EEH87259.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227835571|gb|EEJ46037.1| possible kinase [Escherichia coli 83972]
gi|300299280|gb|EFJ55665.1| kinase, PfkB family [Escherichia coli MS 185-1]
gi|300408683|gb|EFJ92221.1| kinase, PfkB family [Escherichia coli MS 45-1]
gi|315285761|gb|EFU45201.1| kinase, PfkB family [Escherichia coli MS 110-3]
gi|315294467|gb|EFU53815.1| kinase, PfkB family [Escherichia coli MS 153-1]
gi|315297968|gb|EFU57238.1| kinase, PfkB family [Escherichia coli MS 16-3]
gi|355420857|gb|AER85054.1| hypothetical protein i02_2501 [Escherichia coli str. 'clone D i2']
gi|355425777|gb|AER89973.1| hypothetical protein i14_2501 [Escherichia coli str. 'clone D i14']
Length = 351
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 73 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 133 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 191
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 192 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 249
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 250 FH-----------------QHGLNRLVLSMGGDGV 267
>gi|309793047|ref|ZP_07687475.1| kinase, PfkB family [Escherichia coli MS 145-7]
gi|332278678|ref|ZP_08391091.1| conserved hypothetical protein [Shigella sp. D9]
gi|418041946|ref|ZP_12680157.1| kinase, PfkB family [Escherichia coli W26]
gi|308123333|gb|EFO60595.1| kinase, PfkB family [Escherichia coli MS 145-7]
gi|332101030|gb|EGJ04376.1| conserved hypothetical protein [Shigella sp. D9]
gi|383475133|gb|EID67101.1| kinase, PfkB family [Escherichia coli W26]
Length = 351
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 73 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 133 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 191
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 192 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 249
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 250 FH-----------------QHGLNRLVLSMGGDGV 267
>gi|149189908|ref|ZP_01868187.1| Sugar kinase, ribokinase family protein [Vibrio shilonii AK1]
gi|148836223|gb|EDL53181.1| Sugar kinase, ribokinase family protein [Vibrio shilonii AK1]
Length = 363
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+A+ +S+LGSK I A+G D+ G LL+ ++AG+ + T+ +
Sbjct: 93 GGVARNIADNLSRLGSKVQFIGAIGDDLWGEQLLDSCRNAGVGVDHCLTVSGKATSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D +GEL A+ + I++ L + + + + +S +++DANLS AL A
Sbjct: 153 IHDQSGELQLALNDMALIDE-LNVEQLSKRAAVFNRSSAIVLDANLSESAL--DYLFHAH 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPN--EDELVA 162
+ ++ +PVS K+ +I ++Y+ + PN E EL+A
Sbjct: 210 ADKAIFVDPVSSVKAGKIKPYLEYVHTLKPNLSEAELLA 248
>gi|422382257|ref|ZP_16462418.1| kinase, PfkB family [Escherichia coli MS 57-2]
gi|324006526|gb|EGB75745.1| kinase, PfkB family [Escherichia coli MS 57-2]
Length = 351
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 73 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 133 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 191
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 192 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 249
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 250 FH-----------------QHGLNRLVLSMGGDGV 267
>gi|350566572|ref|ZP_08935229.1| PfkB family kinase [Peptoniphilus indolicus ATCC 29427]
gi|348662576|gb|EGY79234.1| PfkB family kinase [Peptoniphilus indolicus ATCC 29427]
Length = 383
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 25/229 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+ E ++KL + I A G D G++L+ K G++T+ + +D T+
Sbjct: 115 GGVGRNICENLAKLSAPVSFIGAFGEDSNGDMLINGLKEIGVNTDDVFIFQDTPTSTYLA 174
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
IL+ + ++ A+ + +EK LTPD + + I +A+ +++D NL + K +
Sbjct: 175 ILNEDRDMEFAINDMSIVEK-LTPDMLFKKKKKIENANCVVMDTNLPESTIKYLLKDVKQ 233
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ + VSV K+ ++ + I + N+ E A LSG I+ N
Sbjct: 234 ---KFYIDCVSVKKAEKLVECLDKIYFLKANKYE----AQFLSG------IEINS----- 275
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
+ + A +L EKGI+ VV+T+G G L K+ +S+ I K+KP
Sbjct: 276 -VEDAQIASEILFEKGIKSVVITIGELG--LVYKDRNNSLYI---KSKP 318
>gi|333996833|ref|YP_004529445.1| kinase, PfkB family [Treponema primitia ZAS-2]
gi|333738197|gb|AEF83687.1| kinase, PfkB family [Treponema primitia ZAS-2]
Length = 317
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN GGV RN+AE + +LG+ ISA+G D ++ ++ AG+ T + R++ I T
Sbjct: 31 VNLSPGGVGRNIAENLVRLGADVSFISAIGDDGFSRLMEGYFNEAGMDTAHLIRRRGIHT 90
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + + G+ AV +E++E +TP I + + ++++DANL P L A+
Sbjct: 91 GLYLALFEPAGKFFIAVNDMEAVES-ITPADIDAAGGLLVHSDLVVLDANLRPETLEAAL 149
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
A N+PV + VS K+ R+ +++ ++++ N E +A + +N R R
Sbjct: 150 AAAG--NVPVMADSVSEAKAERLKAILPGLSILKANRAEAEVLAGFSFDTDNALRKGCRK 207
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
LL+ G + + +TLG G CS
Sbjct: 208 -----------------LLDAGPKQLYITLGKQGA--CS 227
>gi|433323637|ref|ZP_20400968.1| kinase [Escherichia coli J96]
gi|432347735|gb|ELL42192.1| kinase [Escherichia coli J96]
Length = 362
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAYNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|218549573|ref|YP_002383364.1| hypothetical protein EFER_2245 [Escherichia fergusonii ATCC 35469]
gi|218357114|emb|CAQ89747.1| putative kinase [Escherichia fergusonii ATCC 35469]
Length = 362
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSSCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I ++ E A+ +++ LTP + R I H A V++ D NL+ AL I
Sbjct: 153 IANMQEETVLAINDTHILQQ-LTPQLLNASRDLIRH---AGVVLADCNLTAEALEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ ++ + I + P ++EL L G+ PI N
Sbjct: 209 ADE--IPVFIDTVSEFKASKVKTWYSRIHTLKPTQNEL----EILWGQ----PIKDNDDR 258
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 259 I--------SAVNSLHQQGVKRIFVYLKDESVFCSEKD 288
>gi|215487387|ref|YP_002329818.1| hypothetical protein E2348C_2312 [Escherichia coli O127:H6 str.
E2348/69]
gi|222156921|ref|YP_002557060.1| sugar kinase yeiC [Escherichia coli LF82]
gi|306814720|ref|ZP_07448882.1| hypothetical protein ECNC101_21802 [Escherichia coli NC101]
gi|312967463|ref|ZP_07781678.1| uncharacterized sugar kinase yeiC [Escherichia coli 2362-75]
gi|331658480|ref|ZP_08359425.1| putative kinase [Escherichia coli TA206]
gi|386600046|ref|YP_006101552.1| kinase, pfkB family [Escherichia coli IHE3034]
gi|386603810|ref|YP_006110110.1| hypothetical protein UM146_05965 [Escherichia coli UM146]
gi|386619784|ref|YP_006139364.1| hypothetical protein ECNA114_2257 [Escherichia coli NA114]
gi|386639742|ref|YP_006106540.1| sugar kinase YeiC [Escherichia coli ABU 83972]
gi|386705428|ref|YP_006169275.1| hypothetical protein P12B_c2260 [Escherichia coli P12b]
gi|387617525|ref|YP_006120547.1| hypothetical protein NRG857_10995 [Escherichia coli O83:H1 str. NRG
857C]
gi|387830100|ref|YP_003350037.1| putative kinase [Escherichia coli SE15]
gi|416335353|ref|ZP_11672046.1| Pseudouridine kinase [Escherichia coli WV_060327]
gi|417085430|ref|ZP_11952858.1| hypothetical protein i01_02993 [Escherichia coli cloneA_i1]
gi|417756422|ref|ZP_12404497.1| pseudouridine kinase [Escherichia coli DEC2B]
gi|418997734|ref|ZP_13545328.1| pseudouridine kinase [Escherichia coli DEC1A]
gi|419002710|ref|ZP_13550237.1| pseudouridine kinase [Escherichia coli DEC1B]
gi|419008405|ref|ZP_13555836.1| pseudouridine kinase [Escherichia coli DEC1C]
gi|419014085|ref|ZP_13561436.1| pseudouridine kinase [Escherichia coli DEC1D]
gi|419019088|ref|ZP_13566395.1| pseudouridine kinase [Escherichia coli DEC1E]
gi|419024589|ref|ZP_13571815.1| pseudouridine kinase [Escherichia coli DEC2A]
gi|419029630|ref|ZP_13576793.1| pseudouridine kinase [Escherichia coli DEC2C]
gi|419035267|ref|ZP_13582353.1| pseudouridine kinase [Escherichia coli DEC2D]
gi|419040318|ref|ZP_13587346.1| pseudouridine kinase [Escherichia coli DEC2E]
gi|419701002|ref|ZP_14228604.1| pseudouridine kinase [Escherichia coli SCI-07]
gi|419914421|ref|ZP_14432819.1| hypothetical protein ECKD1_14704 [Escherichia coli KD1]
gi|419947096|ref|ZP_14463458.1| hypothetical protein ECHM605_23399 [Escherichia coli HM605]
gi|422749446|ref|ZP_16803358.1| pfkB family protein carbohydrate kinase [Escherichia coli H252]
gi|422755590|ref|ZP_16809414.1| pfkB family protein carbohydrate kinase [Escherichia coli H263]
gi|422837779|ref|ZP_16885752.1| pseudouridine kinase [Escherichia coli H397]
gi|432358511|ref|ZP_19601737.1| pseudouridine kinase [Escherichia coli KTE4]
gi|432363244|ref|ZP_19606411.1| pseudouridine kinase [Escherichia coli KTE5]
gi|432381906|ref|ZP_19624849.1| pseudouridine kinase [Escherichia coli KTE15]
gi|432387718|ref|ZP_19630607.1| pseudouridine kinase [Escherichia coli KTE16]
gi|432397994|ref|ZP_19640775.1| pseudouridine kinase [Escherichia coli KTE25]
gi|432407222|ref|ZP_19649931.1| pseudouridine kinase [Escherichia coli KTE28]
gi|432412379|ref|ZP_19655042.1| pseudouridine kinase [Escherichia coli KTE39]
gi|432422513|ref|ZP_19665058.1| pseudouridine kinase [Escherichia coli KTE178]
gi|432432454|ref|ZP_19674883.1| pseudouridine kinase [Escherichia coli KTE187]
gi|432436892|ref|ZP_19679280.1| pseudouridine kinase [Escherichia coli KTE188]
gi|432441662|ref|ZP_19684002.1| pseudouridine kinase [Escherichia coli KTE189]
gi|432446776|ref|ZP_19689075.1| pseudouridine kinase [Escherichia coli KTE191]
gi|432457273|ref|ZP_19699457.1| pseudouridine kinase [Escherichia coli KTE201]
gi|432466259|ref|ZP_19708348.1| pseudouridine kinase [Escherichia coli KTE205]
gi|432496273|ref|ZP_19738069.1| pseudouridine kinase [Escherichia coli KTE214]
gi|432500653|ref|ZP_19742410.1| pseudouridine kinase [Escherichia coli KTE216]
gi|432504995|ref|ZP_19746719.1| pseudouridine kinase [Escherichia coli KTE220]
gi|432514468|ref|ZP_19751692.1| pseudouridine kinase [Escherichia coli KTE224]
gi|432524364|ref|ZP_19761492.1| pseudouridine kinase [Escherichia coli KTE230]
gi|432554256|ref|ZP_19790979.1| pseudouridine kinase [Escherichia coli KTE47]
gi|432559416|ref|ZP_19796085.1| pseudouridine kinase [Escherichia coli KTE49]
gi|432569246|ref|ZP_19805758.1| pseudouridine kinase [Escherichia coli KTE53]
gi|432574246|ref|ZP_19810726.1| pseudouridine kinase [Escherichia coli KTE55]
gi|432584422|ref|ZP_19820816.1| pseudouridine kinase [Escherichia coli KTE57]
gi|432588494|ref|ZP_19824850.1| pseudouridine kinase [Escherichia coli KTE58]
gi|432593432|ref|ZP_19829749.1| pseudouridine kinase [Escherichia coli KTE60]
gi|432598153|ref|ZP_19834429.1| pseudouridine kinase [Escherichia coli KTE62]
gi|432608053|ref|ZP_19844238.1| pseudouridine kinase [Escherichia coli KTE67]
gi|432611975|ref|ZP_19848137.1| pseudouridine kinase [Escherichia coli KTE72]
gi|432646737|ref|ZP_19882527.1| pseudouridine kinase [Escherichia coli KTE86]
gi|432651721|ref|ZP_19887475.1| pseudouridine kinase [Escherichia coli KTE87]
gi|432656320|ref|ZP_19892024.1| pseudouridine kinase [Escherichia coli KTE93]
gi|432695028|ref|ZP_19930227.1| pseudouridine kinase [Escherichia coli KTE162]
gi|432699597|ref|ZP_19934751.1| pseudouridine kinase [Escherichia coli KTE169]
gi|432711217|ref|ZP_19946277.1| pseudouridine kinase [Escherichia coli KTE6]
gi|432723618|ref|ZP_19958538.1| pseudouridine kinase [Escherichia coli KTE17]
gi|432728205|ref|ZP_19963084.1| pseudouridine kinase [Escherichia coli KTE18]
gi|432732900|ref|ZP_19967733.1| pseudouridine kinase [Escherichia coli KTE45]
gi|432741899|ref|ZP_19976618.1| pseudouridine kinase [Escherichia coli KTE23]
gi|432746208|ref|ZP_19980874.1| pseudouridine kinase [Escherichia coli KTE43]
gi|432754981|ref|ZP_19989531.1| pseudouridine kinase [Escherichia coli KTE22]
gi|432759986|ref|ZP_19994480.1| pseudouridine kinase [Escherichia coli KTE46]
gi|432779106|ref|ZP_20013349.1| pseudouridine kinase [Escherichia coli KTE59]
gi|432784114|ref|ZP_20018293.1| pseudouridine kinase [Escherichia coli KTE63]
gi|432788053|ref|ZP_20022185.1| pseudouridine kinase [Escherichia coli KTE65]
gi|432802384|ref|ZP_20036363.1| pseudouridine kinase [Escherichia coli KTE84]
gi|432821502|ref|ZP_20055194.1| pseudouridine kinase [Escherichia coli KTE118]
gi|432827634|ref|ZP_20061286.1| pseudouridine kinase [Escherichia coli KTE123]
gi|432845136|ref|ZP_20077969.1| pseudouridine kinase [Escherichia coli KTE141]
gi|432899185|ref|ZP_20109877.1| pseudouridine kinase [Escherichia coli KTE192]
gi|432905425|ref|ZP_20114292.1| pseudouridine kinase [Escherichia coli KTE194]
gi|432919631|ref|ZP_20123745.1| pseudouridine kinase [Escherichia coli KTE173]
gi|432927533|ref|ZP_20128962.1| pseudouridine kinase [Escherichia coli KTE175]
gi|432938517|ref|ZP_20136795.1| pseudouridine kinase [Escherichia coli KTE183]
gi|432972369|ref|ZP_20161236.1| pseudouridine kinase [Escherichia coli KTE207]
gi|432974314|ref|ZP_20163153.1| pseudouridine kinase [Escherichia coli KTE209]
gi|432981595|ref|ZP_20170370.1| pseudouridine kinase [Escherichia coli KTE211]
gi|432985925|ref|ZP_20174648.1| pseudouridine kinase [Escherichia coli KTE215]
gi|432991206|ref|ZP_20179870.1| pseudouridine kinase [Escherichia coli KTE217]
gi|432995902|ref|ZP_20184507.1| pseudouridine kinase [Escherichia coli KTE218]
gi|433000471|ref|ZP_20188996.1| pseudouridine kinase [Escherichia coli KTE223]
gi|433005624|ref|ZP_20194053.1| pseudouridine kinase [Escherichia coli KTE227]
gi|433008207|ref|ZP_20196624.1| pseudouridine kinase [Escherichia coli KTE229]
gi|433014431|ref|ZP_20202779.1| pseudouridine kinase [Escherichia coli KTE104]
gi|433024049|ref|ZP_20212037.1| pseudouridine kinase [Escherichia coli KTE106]
gi|433029142|ref|ZP_20217001.1| pseudouridine kinase [Escherichia coli KTE109]
gi|433039166|ref|ZP_20226765.1| pseudouridine kinase [Escherichia coli KTE113]
gi|433058685|ref|ZP_20245731.1| pseudouridine kinase [Escherichia coli KTE124]
gi|433073358|ref|ZP_20260013.1| pseudouridine kinase [Escherichia coli KTE129]
gi|433083124|ref|ZP_20269581.1| pseudouridine kinase [Escherichia coli KTE133]
gi|433087846|ref|ZP_20274217.1| pseudouridine kinase [Escherichia coli KTE137]
gi|433097037|ref|ZP_20283221.1| pseudouridine kinase [Escherichia coli KTE139]
gi|433101712|ref|ZP_20287798.1| pseudouridine kinase [Escherichia coli KTE145]
gi|433106459|ref|ZP_20292434.1| pseudouridine kinase [Escherichia coli KTE148]
gi|433111417|ref|ZP_20297282.1| pseudouridine kinase [Escherichia coli KTE150]
gi|433116100|ref|ZP_20301891.1| pseudouridine kinase [Escherichia coli KTE153]
gi|433120764|ref|ZP_20306436.1| pseudouridine kinase [Escherichia coli KTE157]
gi|433125750|ref|ZP_20311309.1| pseudouridine kinase [Escherichia coli KTE160]
gi|433139819|ref|ZP_20325075.1| pseudouridine kinase [Escherichia coli KTE167]
gi|433144756|ref|ZP_20329900.1| pseudouridine kinase [Escherichia coli KTE168]
gi|433149736|ref|ZP_20334757.1| pseudouridine kinase [Escherichia coli KTE174]
gi|433154286|ref|ZP_20339229.1| pseudouridine kinase [Escherichia coli KTE176]
gi|433164041|ref|ZP_20348779.1| pseudouridine kinase [Escherichia coli KTE179]
gi|433169146|ref|ZP_20353774.1| pseudouridine kinase [Escherichia coli KTE180]
gi|433183830|ref|ZP_20368081.1| pseudouridine kinase [Escherichia coli KTE85]
gi|433188949|ref|ZP_20373047.1| pseudouridine kinase [Escherichia coli KTE88]
gi|433198801|ref|ZP_20382703.1| pseudouridine kinase [Escherichia coli KTE94]
gi|433208341|ref|ZP_20392015.1| pseudouridine kinase [Escherichia coli KTE97]
gi|433213077|ref|ZP_20396667.1| pseudouridine kinase [Escherichia coli KTE99]
gi|433323642|ref|ZP_20400973.1| pseudouridine kinase [Escherichia coli J96]
gi|442607918|ref|ZP_21022678.1| Pseudouridine kinase [Escherichia coli Nissle 1917]
gi|215265459|emb|CAS09860.1| predicted kinase [Escherichia coli O127:H6 str. E2348/69]
gi|222033926|emb|CAP76667.1| Uncharacterized sugar kinase yeiC [Escherichia coli LF82]
gi|281179257|dbj|BAI55587.1| putative kinase [Escherichia coli SE15]
gi|294491840|gb|ADE90596.1| kinase, pfkB family [Escherichia coli IHE3034]
gi|305852114|gb|EFM52566.1| hypothetical protein ECNC101_21802 [Escherichia coli NC101]
gi|307554234|gb|ADN47009.1| hypothetical sugar kinase YeiC [Escherichia coli ABU 83972]
gi|307626294|gb|ADN70598.1| hypothetical protein UM146_05965 [Escherichia coli UM146]
gi|312287660|gb|EFR15565.1| uncharacterized sugar kinase yeiC [Escherichia coli 2362-75]
gi|312946786|gb|ADR27613.1| hypothetical protein NRG857_10995 [Escherichia coli O83:H1 str. NRG
857C]
gi|320196036|gb|EFW70660.1| Pseudouridine kinase [Escherichia coli WV_060327]
gi|323951961|gb|EGB47835.1| pfkB family protein carbohydrate kinase [Escherichia coli H252]
gi|323955934|gb|EGB51687.1| pfkB family protein carbohydrate kinase [Escherichia coli H263]
gi|331054404|gb|EGI26430.1| putative kinase [Escherichia coli TA206]
gi|333970285|gb|AEG37090.1| hypothetical protein ECNA114_2257 [Escherichia coli NA114]
gi|355351202|gb|EHG00394.1| hypothetical protein i01_02993 [Escherichia coli cloneA_i1]
gi|371610688|gb|EHN99216.1| pseudouridine kinase [Escherichia coli H397]
gi|377843561|gb|EHU08601.1| pseudouridine kinase [Escherichia coli DEC1A]
gi|377843923|gb|EHU08960.1| pseudouridine kinase [Escherichia coli DEC1C]
gi|377847589|gb|EHU12587.1| pseudouridine kinase [Escherichia coli DEC1B]
gi|377857423|gb|EHU22274.1| pseudouridine kinase [Escherichia coli DEC1D]
gi|377860142|gb|EHU24968.1| pseudouridine kinase [Escherichia coli DEC1E]
gi|377863373|gb|EHU28178.1| pseudouridine kinase [Escherichia coli DEC2A]
gi|377873838|gb|EHU38469.1| pseudouridine kinase [Escherichia coli DEC2B]
gi|377877812|gb|EHU42401.1| pseudouridine kinase [Escherichia coli DEC2C]
gi|377879623|gb|EHU44195.1| pseudouridine kinase [Escherichia coli DEC2D]
gi|377890358|gb|EHU54815.1| pseudouridine kinase [Escherichia coli DEC2E]
gi|380347748|gb|EIA36034.1| pseudouridine kinase [Escherichia coli SCI-07]
gi|383103596|gb|AFG41105.1| hypothetical protein P12B_c2260 [Escherichia coli P12b]
gi|388386692|gb|EIL48332.1| hypothetical protein ECKD1_14704 [Escherichia coli KD1]
gi|388411533|gb|EIL71702.1| hypothetical protein ECHM605_23399 [Escherichia coli HM605]
gi|430877166|gb|ELC00622.1| pseudouridine kinase [Escherichia coli KTE4]
gi|430886463|gb|ELC09318.1| pseudouridine kinase [Escherichia coli KTE5]
gi|430906366|gb|ELC27966.1| pseudouridine kinase [Escherichia coli KTE16]
gi|430907381|gb|ELC28879.1| pseudouridine kinase [Escherichia coli KTE15]
gi|430916098|gb|ELC37176.1| pseudouridine kinase [Escherichia coli KTE25]
gi|430929981|gb|ELC50490.1| pseudouridine kinase [Escherichia coli KTE28]
gi|430934786|gb|ELC55133.1| pseudouridine kinase [Escherichia coli KTE39]
gi|430944125|gb|ELC64224.1| pseudouridine kinase [Escherichia coli KTE178]
gi|430952879|gb|ELC71793.1| pseudouridine kinase [Escherichia coli KTE187]
gi|430962223|gb|ELC80080.1| pseudouridine kinase [Escherichia coli KTE188]
gi|430966116|gb|ELC83524.1| pseudouridine kinase [Escherichia coli KTE189]
gi|430973049|gb|ELC90017.1| pseudouridine kinase [Escherichia coli KTE191]
gi|430982007|gb|ELC98726.1| pseudouridine kinase [Escherichia coli KTE201]
gi|430993843|gb|ELD10187.1| pseudouridine kinase [Escherichia coli KTE205]
gi|431023531|gb|ELD36726.1| pseudouridine kinase [Escherichia coli KTE214]
gi|431028230|gb|ELD41274.1| pseudouridine kinase [Escherichia coli KTE216]
gi|431038089|gb|ELD49058.1| pseudouridine kinase [Escherichia coli KTE220]
gi|431041864|gb|ELD52359.1| pseudouridine kinase [Escherichia coli KTE224]
gi|431051480|gb|ELD61143.1| pseudouridine kinase [Escherichia coli KTE230]
gi|431084061|gb|ELD90232.1| pseudouridine kinase [Escherichia coli KTE47]
gi|431090636|gb|ELD96387.1| pseudouridine kinase [Escherichia coli KTE49]
gi|431099960|gb|ELE04976.1| pseudouridine kinase [Escherichia coli KTE53]
gi|431107844|gb|ELE12008.1| pseudouridine kinase [Escherichia coli KTE55]
gi|431115781|gb|ELE19275.1| pseudouridine kinase [Escherichia coli KTE57]
gi|431120827|gb|ELE23825.1| pseudouridine kinase [Escherichia coli KTE58]
gi|431127532|gb|ELE29832.1| pseudouridine kinase [Escherichia coli KTE60]
gi|431131020|gb|ELE33103.1| pseudouridine kinase [Escherichia coli KTE62]
gi|431137939|gb|ELE39779.1| pseudouridine kinase [Escherichia coli KTE67]
gi|431148149|gb|ELE49440.1| pseudouridine kinase [Escherichia coli KTE72]
gi|431180774|gb|ELE80661.1| pseudouridine kinase [Escherichia coli KTE86]
gi|431190168|gb|ELE89568.1| pseudouridine kinase [Escherichia coli KTE87]
gi|431190790|gb|ELE90176.1| pseudouridine kinase [Escherichia coli KTE93]
gi|431233610|gb|ELF29197.1| pseudouridine kinase [Escherichia coli KTE162]
gi|431243346|gb|ELF37733.1| pseudouridine kinase [Escherichia coli KTE169]
gi|431248897|gb|ELF43072.1| pseudouridine kinase [Escherichia coli KTE6]
gi|431266172|gb|ELF57734.1| pseudouridine kinase [Escherichia coli KTE17]
gi|431273894|gb|ELF64968.1| pseudouridine kinase [Escherichia coli KTE18]
gi|431276087|gb|ELF67114.1| pseudouridine kinase [Escherichia coli KTE45]
gi|431283590|gb|ELF74449.1| pseudouridine kinase [Escherichia coli KTE23]
gi|431291247|gb|ELF81760.1| pseudouridine kinase [Escherichia coli KTE43]
gi|431302190|gb|ELF91378.1| pseudouridine kinase [Escherichia coli KTE22]
gi|431307640|gb|ELF95930.1| pseudouridine kinase [Escherichia coli KTE46]
gi|431327259|gb|ELG14604.1| pseudouridine kinase [Escherichia coli KTE59]
gi|431328537|gb|ELG15841.1| pseudouridine kinase [Escherichia coli KTE63]
gi|431337770|gb|ELG24858.1| pseudouridine kinase [Escherichia coli KTE65]
gi|431348173|gb|ELG35031.1| pseudouridine kinase [Escherichia coli KTE84]
gi|431368349|gb|ELG54817.1| pseudouridine kinase [Escherichia coli KTE118]
gi|431372883|gb|ELG58545.1| pseudouridine kinase [Escherichia coli KTE123]
gi|431394558|gb|ELG78091.1| pseudouridine kinase [Escherichia coli KTE141]
gi|431426837|gb|ELH08881.1| pseudouridine kinase [Escherichia coli KTE192]
gi|431432660|gb|ELH14337.1| pseudouridine kinase [Escherichia coli KTE194]
gi|431443675|gb|ELH24701.1| pseudouridine kinase [Escherichia coli KTE173]
gi|431444056|gb|ELH25080.1| pseudouridine kinase [Escherichia coli KTE175]
gi|431463252|gb|ELH43445.1| pseudouridine kinase [Escherichia coli KTE183]
gi|431481871|gb|ELH61578.1| pseudouridine kinase [Escherichia coli KTE207]
gi|431489175|gb|ELH68803.1| pseudouridine kinase [Escherichia coli KTE209]
gi|431490904|gb|ELH70511.1| pseudouridine kinase [Escherichia coli KTE211]
gi|431495288|gb|ELH74874.1| pseudouridine kinase [Escherichia coli KTE217]
gi|431500162|gb|ELH79178.1| pseudouridine kinase [Escherichia coli KTE215]
gi|431505462|gb|ELH84068.1| pseudouridine kinase [Escherichia coli KTE218]
gi|431508457|gb|ELH86729.1| pseudouridine kinase [Escherichia coli KTE223]
gi|431514611|gb|ELH92452.1| pseudouridine kinase [Escherichia coli KTE227]
gi|431523537|gb|ELI00674.1| pseudouridine kinase [Escherichia coli KTE229]
gi|431530529|gb|ELI07208.1| pseudouridine kinase [Escherichia coli KTE104]
gi|431535742|gb|ELI12081.1| pseudouridine kinase [Escherichia coli KTE106]
gi|431542882|gb|ELI17878.1| pseudouridine kinase [Escherichia coli KTE109]
gi|431551266|gb|ELI25252.1| pseudouridine kinase [Escherichia coli KTE113]
gi|431568940|gb|ELI41902.1| pseudouridine kinase [Escherichia coli KTE124]
gi|431588069|gb|ELI59417.1| pseudouridine kinase [Escherichia coli KTE129]
gi|431602016|gb|ELI71525.1| pseudouridine kinase [Escherichia coli KTE133]
gi|431604357|gb|ELI73766.1| pseudouridine kinase [Escherichia coli KTE137]
gi|431615385|gb|ELI84514.1| pseudouridine kinase [Escherichia coli KTE139]
gi|431619306|gb|ELI88230.1| pseudouridine kinase [Escherichia coli KTE145]
gi|431627166|gb|ELI95577.1| pseudouridine kinase [Escherichia coli KTE148]
gi|431628721|gb|ELI97097.1| pseudouridine kinase [Escherichia coli KTE150]
gi|431633862|gb|ELJ02124.1| pseudouridine kinase [Escherichia coli KTE153]
gi|431642365|gb|ELJ10088.1| pseudouridine kinase [Escherichia coli KTE157]
gi|431644984|gb|ELJ12637.1| pseudouridine kinase [Escherichia coli KTE160]
gi|431660132|gb|ELJ27020.1| pseudouridine kinase [Escherichia coli KTE167]
gi|431661451|gb|ELJ28264.1| pseudouridine kinase [Escherichia coli KTE168]
gi|431670405|gb|ELJ36758.1| pseudouridine kinase [Escherichia coli KTE174]
gi|431674176|gb|ELJ40359.1| pseudouridine kinase [Escherichia coli KTE176]
gi|431687346|gb|ELJ52897.1| pseudouridine kinase [Escherichia coli KTE179]
gi|431687998|gb|ELJ53539.1| pseudouridine kinase [Escherichia coli KTE180]
gi|431705655|gb|ELJ70245.1| pseudouridine kinase [Escherichia coli KTE88]
gi|431706392|gb|ELJ70963.1| pseudouridine kinase [Escherichia coli KTE85]
gi|431721505|gb|ELJ85499.1| pseudouridine kinase [Escherichia coli KTE94]
gi|431729626|gb|ELJ93245.1| pseudouridine kinase [Escherichia coli KTE97]
gi|431734102|gb|ELJ97503.1| pseudouridine kinase [Escherichia coli KTE99]
gi|432347740|gb|ELL42197.1| pseudouridine kinase [Escherichia coli J96]
gi|441710523|emb|CCQ08655.1| Pseudouridine kinase [Escherichia coli Nissle 1917]
Length = 313
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|419930870|ref|ZP_14448462.1| hypothetical protein EC5411_21319 [Escherichia coli 541-1]
gi|388399389|gb|EIL60189.1| hypothetical protein EC5411_21319 [Escherichia coli 541-1]
Length = 313
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|383179126|ref|YP_005457131.1| pseudouridine kinase [Shigella sonnei 53G]
gi|414576763|ref|ZP_11433945.1| pseudouridine kinase [Shigella sonnei 3233-85]
gi|415844580|ref|ZP_11524322.1| hypothetical protein SS53G_1021 [Shigella sonnei 53G]
gi|417159776|ref|ZP_11996804.1| carbohydrate kinase, PfkB family [Escherichia coli 99.0741]
gi|418266546|ref|ZP_12886027.1| pseudouridine kinase [Shigella sonnei str. Moseley]
gi|420359230|ref|ZP_14860204.1| pseudouridine kinase [Shigella sonnei 3226-85]
gi|432481539|ref|ZP_19723496.1| pseudouridine kinase [Escherichia coli KTE210]
gi|323168692|gb|EFZ54372.1| hypothetical protein SS53G_1021 [Shigella sonnei 53G]
gi|386175227|gb|EIH47219.1| carbohydrate kinase, PfkB family [Escherichia coli 99.0741]
gi|391281911|gb|EIQ40548.1| pseudouridine kinase [Shigella sonnei 3226-85]
gi|391284516|gb|EIQ43111.1| pseudouridine kinase [Shigella sonnei 3233-85]
gi|397899371|gb|EJL15745.1| pseudouridine kinase [Shigella sonnei str. Moseley]
gi|431006911|gb|ELD21880.1| pseudouridine kinase [Escherichia coli KTE210]
Length = 313
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|154495943|ref|ZP_02034639.1| hypothetical protein BACCAP_00224 [Bacteroides capillosus ATCC
29799]
gi|150274826|gb|EDN01882.1| HTH domain protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 359
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V LGGV RN+A MS LG +++A G DM + G+ T
Sbjct: 88 VRMSLGGVGRNIAHNMSLLGMDVRLLTAFGDDMNAQRIAASCGELGIDVSQCLTVPGGAT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I D G++A AV+ +E I + +TP ++ + +A +++VD N+ ++A
Sbjct: 148 STYLFITDERGDMALAVSDME-IYRHVTPAFLSSRSRLLQNAQLIVVDTNIPAESIA--- 203
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A +P++ +PVS K+ ++ V+ + + PN E A LSG +
Sbjct: 204 WLAENVRLPIFADPVSTAKAEKLRPVLGKLHTLKPNRLE----AELLSGVTITDE----- 254
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
++L A LL G+R V ++LG DGVL
Sbjct: 255 -------KSLNQAADALLATGLRRVFISLGGDGVL 282
>gi|432809814|ref|ZP_20043707.1| pyrimidine kinase [Escherichia coli KTE101]
gi|431362582|gb|ELG49160.1| pyrimidine kinase [Escherichia coli KTE101]
Length = 261
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
IP++ + VS K+ ++ + I + P ++EL
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL 244
>gi|331647818|ref|ZP_08348910.1| putative kinase [Escherichia coli M605]
gi|331043542|gb|EGI15680.1| putative kinase [Escherichia coli M605]
Length = 351
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 73 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVLGENT 132
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 133 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 191
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 192 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 249
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 250 FH-----------------QHGLNRLVLSMGGDGV 267
>gi|422804821|ref|ZP_16853253.1| pfkB family protein carbohydrate kinase [Escherichia fergusonii
B253]
gi|324114424|gb|EGC08393.1| pfkB family protein carbohydrate kinase [Escherichia fergusonii
B253]
Length = 362
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSSCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I ++ E A+ +++ LTP + R I H A V++ D NL+ AL I
Sbjct: 153 IANMQEETVLAINDTHILQQ-LTPQLLNASRDLIRH---AGVVLADCNLTAEALEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
A E IPV+ + VS K+ ++ + I + P ++EL
Sbjct: 209 ADE--IPVFIDTVSEFKASKVKTWYSRIHTLKPTQNEL 244
>gi|194016556|ref|ZP_03055170.1| ribokinase [Bacillus pumilus ATCC 7061]
gi|194012029|gb|EDW21597.1| ribokinase [Bacillus pumilus ATCC 7061]
Length = 292
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ YM+ +G D G +L + + G+ T ++ ++++
Sbjct: 36 VPGGKGANQAVASARLGADVYMVGRVGDDAYGQDILSNLQDQGVRTSYMKPVTEMESGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TPD++R+ + I ++++ + + A C I
Sbjct: 96 HIIL---AEGDNSIVVVKGANDEVTPDYVREALSTIDDIGIVLIQQEIPEETVEAVCAIC 152
Query: 124 AECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
+E IPV P K S+++ YIT PNE E V M N L E+ R
Sbjct: 153 SEKEIPVILNPAPARKVSQQVLDQAAYIT---PNEHEAVLMFNGLPIEDALR 201
>gi|424816959|ref|ZP_18242110.1| hypothetical protein ECD227_2076 [Escherichia fergusonii ECD227]
gi|325497979|gb|EGC95838.1| hypothetical protein ECD227_2076 [Escherichia fergusonii ECD227]
Length = 313
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTSGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ +++ Q I A+V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISDCISAEFLSQHQEFIRGANVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|388457629|ref|ZP_10139924.1| carbohydrate kinase, pfkB family protein [Fluoribacter dumoffii
Tex-KL]
Length = 365
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVA NVA+ +S L + S +G D G L H KS + + + + TA
Sbjct: 82 LGGVAHNVAKNLSLLTDNIHFYSVVGQDNEGVDALTHLKSLNIQVQNVLTIPNKPTARYD 141
Query: 65 NILDVNGELAAAVASVESIEKF----LTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+LD GEL A+A +E + T W+ ++ ++ +D NL + +
Sbjct: 142 VLLDQKGELLIALADMEIFDHIPFSKFTASWLEW-----NNEEIVFLDTNLPQAIIEYAL 196
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+IA N + +PVS K++++ ++++ ++ P+ E + N
Sbjct: 197 QIAHRQNFRLCIDPVSALKAKKLPGCLEHVYLLKPDRFEAETLTNTCI------------ 244
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
HS + K LL+KG++ +++LG G +L ++
Sbjct: 245 HSVSDCIKAGK----FLLDKGVKNCIISLGKAGYVLVNE 279
>gi|215487381|ref|YP_002329812.1| hypothetical protein E2348C_2306 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265453|emb|CAS09854.1| predicted kinase [Escherichia coli O127:H6 str. E2348/69]
Length = 362
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + +G++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRSGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP++ + VS K+ ++ + I + P ++EL L G+ + DR +
Sbjct: 212 --IPMFVDTVSEFKANKVKNWYSRIHTLKPTQNEL----EILWGQPIKDDNDRIR----- 260
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 -------AVNSLHQQGVKRIFVYLKDESVFCSDKD 288
>gi|67467359|ref|XP_649795.1| Hypothetical protein T24C12.3 [Entamoeba histolytica HM-1:IMSS]
gi|56466301|gb|EAL44409.1| Hypothetical protein T24C12.3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 691
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 35/250 (14%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN GGV N+AE + ++G+ IS +G D+ G +L +++K + T + + + T
Sbjct: 401 VNQNRGGVGHNIAENLHRIGNDILFISTIGNDLLGKMLKQYFKDIKMKTNAL-VESEFAT 459
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V S +++ +G+L A V ++ K + I+QF + IS+A +++D N + +
Sbjct: 460 PVYSGVINTSGQLTAGVIDSRAL-KGMKVQNIQQFKNEISNAEYVIMDTNFGLDIIKEAL 518
Query: 121 KIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANAL-------SGENM 172
K A +W EP T + + V+ I SPN E+ ++ L G+N
Sbjct: 519 KYAKG---KIWIEPTGETSLKILNEEVMSRIDYFSPNNFEIGWLSKKLGYKGGVCDGDN- 574
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232
ID AE + + +GI+ +++ L + G LL K R G +
Sbjct: 575 ---IDECIKMAE-----------LFINRGIKTLIVKLSAAGCLLVEK------RNGQLYS 614
Query: 233 KPY-GFSRDL 241
K Y F DL
Sbjct: 615 KEYPAFGVDL 624
>gi|424816953|ref|ZP_18242104.1| hypothetical protein ECD227_2070 [Escherichia fergusonii ECD227]
gi|325497973|gb|EGC95832.1| hypothetical protein ECD227_2070 [Escherichia fergusonii ECD227]
Length = 362
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSSCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I ++ E A+ +++ LTP + R I H A V++ D NL+ AL I
Sbjct: 153 IANMQEETVLAINDTHILQQ-LTPQLLNASRDLIRH---AGVVLADCNLAAEALEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
A E IPV+ + VS K+ ++ + I + P ++EL
Sbjct: 209 ADE--IPVFIDTVSEFKASKVKTWYSRIHTLKPTQNEL 244
>gi|451852975|gb|EMD66269.1| hypothetical protein COCSADRAFT_137719 [Cochliobolus sativus
ND90Pr]
Length = 802
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 136/341 (39%), Gaps = 46/341 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID- 59
+ LGGVA N+A+ LGS + SA+G D++G + + G+ST GI
Sbjct: 442 ITQSLGGVAHNIAKASHLLGSSVRLHSAVGDDLSGRAAVSQLQEEGMSTSGIETMPAPSR 501
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI-----SSASVLMVDANLSPP 114
TA I + N +LA A+A + SI + + D IRQ + + + DAN S
Sbjct: 502 TAQYVAINNTNKDLAMAMADM-SILETIPNDTIRQLANTVFDDLSGPPKAFVADANWSST 560
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSV--------VKYITVVSPNEDELVAMANA 166
AL + A + N FEPVS KS RI + + +PN EL A+ +
Sbjct: 561 ALHTWLQAAHQANTTTIFEPVSTAKSLRIFPQKAAPTVFPTPLVDITTPNTYELSALHDH 620
Query: 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRL-VVLTLGSD----GVLLCSKEL 221
F + F + L + G+R+ + +T+GSD G+ + +L
Sbjct: 621 AHQSGYF--------DSPEWFSVID--ALGIPNGGLRVPLAVTIGSDVVDQGIPQQAIKL 670
Query: 222 LSSMRIGLRKTKPYG--------------FSRDLYKTVTSRCHSSRYSGAMEPAGG--SQ 265
L L K P G S + V +R +S + A G +
Sbjct: 671 LPFFPTILTKLGPQGVLMTKLLTADAPELHSEAERQFVLARNSASSATNAQSSVTGLYVR 730
Query: 266 FFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSV 306
F V P VV + G GD G S+S G + V
Sbjct: 731 LFPVEKVLSPEEVVSVNGIGDTFCGALAHSLSQGRRIQDVV 771
>gi|449707063|gb|EMD46787.1| kinase pfkB family protein [Entamoeba histolytica KU27]
Length = 691
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 35/250 (14%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN GGV N+AE + ++G+ IS +G D+ G +L +++K + T + + + T
Sbjct: 401 VNQNRGGVGHNIAENLHRIGNDILFISTIGNDLLGKMLKQYFKDIKMKTNAL-VESEFAT 459
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V S +++ +G+L A V ++ K + I+QF + IS+A +++D N + +
Sbjct: 460 PVYSGVINTSGQLTAGVIDSRAL-KGMKVQNIQQFKNEISNAEYVIMDTNFGLDIIKEAL 518
Query: 121 KIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANAL-------SGENM 172
K A +W EP T + + V+ I SPN E+ ++ L G+N
Sbjct: 519 KYAKG---KIWIEPTGETSLKILNEEVMSRIDYFSPNNFEIGWLSKKLGYKGGVCDGDN- 574
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232
ID AE + + +GI+ +++ L + G LL K R G +
Sbjct: 575 ---IDECIKMAE-----------LFINRGIKTLIVKLSAAGCLLVEK------RNGQLYS 614
Query: 233 KPY-GFSRDL 241
K Y F DL
Sbjct: 615 KEYPAFGVDL 624
>gi|417662781|ref|ZP_12312362.1| pseudouridine kinase [Escherichia coli AA86]
gi|330911999|gb|EGH40509.1| pseudouridine kinase [Escherichia coli AA86]
Length = 313
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVLGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEALVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|344301575|gb|EGW31887.1| hypothetical protein SPAPADRAFT_72581 [Spathaspora passalidarum
NRRL Y-27907]
Length = 371
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 66/333 (19%)
Query: 5 LGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
+GGV N++ SK G + +IS +G D AG +L+ K G+ T GI +TA
Sbjct: 19 VGGVGFNIS-LASKYGYANSKLISQIGNDFAGTFILDKLKHEGIDTSGITLANG-NTAQY 76
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ I D GEL A A + IE+ + + I++ ++ +++ +D NLSP +CK+
Sbjct: 77 TCIHDSAGELVVACADMSLIEQDFSENIIKEIEYN--QPNLIAMDCNLSP---TTTCKVL 131
Query: 124 AECNIPVWFEPVSVTKSRRITSVV------KYITVVSPNEDELVAMANALSGENMFRPID 177
+ + EP S K++RI I +++P EL ++ + + F +D
Sbjct: 132 SSSLSNIILEPTSHIKAKRIAEFNLQCFPNNKIQLITPTIQELNSIYESFQSKGYFNDLD 191
Query: 178 R----------NKHSAESLFQTLKPAILVLLEKGI-----------RLVVLTLGSDGVLL 216
N + + L + P I LL +G+ + +++ LG GV+L
Sbjct: 192 NWFPVLDSFNINSNFRDKLDRINTPTIKDLLAQGVFQQCFHLLPYFQNILVKLGDKGVIL 251
Query: 217 CSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRY-------SGAMEPAGGSQFFAV 269
S LS+ + D YK++ + +S+Y S + + G +V
Sbjct: 252 IS---LST-------------TIDDYKSIPT---TSQYRPEILLTSQGTKLSQGRMGISV 292
Query: 270 HFPALPA-----SVVRLTGAGDCLVGGTLASIS 297
+ +P +V +TGAGD G A +S
Sbjct: 293 EYFPIPQENRNLDIVNVTGAGDSFFGYLAAYLS 325
>gi|452002541|gb|EMD94999.1| hypothetical protein COCHEDRAFT_1129070 [Cochliobolus
heterostrophus C5]
Length = 802
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 137/341 (40%), Gaps = 46/341 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKDID 59
+ LGGVA N+A+ LGS + SA+G D++G + + G+S GI
Sbjct: 442 ITQTLGGVAHNIAKASHLLGSSVRLHSAVGDDLSGRAAISQLQEEGMSVSGIETIPAPSR 501
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI-----SSASVLMVDANLSPP 114
TA I + N +LA A+A + SI + + D IRQ + + + + DAN S
Sbjct: 502 TAQYVAINNTNKDLAMAMADM-SILETIPDDTIRQLANTVFDKLSTPPKAFVADANWSSA 560
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI-----TSVV---KYITVVSPNEDELVAMANA 166
AL + A + N FEPVS KS RI T V + + +PN EL A+ +
Sbjct: 561 ALHIWLQAAHQANTTTIFEPVSTAKSLRIFPQTATPTVFPAPLVDITTPNTYELSALHDH 620
Query: 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRL-VVLTLGSD----GVLLCSKEL 221
F + F + L + G+R+ + +T+GSD G+ + +L
Sbjct: 621 AHQSGYF--------DSSEWFSVID--ALGIPNGGLRVPLAVTVGSDVVDQGIPQQAIKL 670
Query: 222 LSSMRIGLRKTKPYG--------------FSRDLYKTVTSRCHSSRYSGAMEPAGG--SQ 265
L L K P G S + V +R + + A GG +
Sbjct: 671 LPFFPTILTKLGPQGVLMTKLLTADAPELHSEAERQFVLARNSAPSATNAQSSVGGLYVR 730
Query: 266 FFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSV 306
F V P VV + G GD G +S G + V
Sbjct: 731 LFPVEKVLSPEEVVSVNGIGDTFCGSLAHGLSQGRQIQDVV 771
>gi|119480347|ref|XP_001260202.1| IdgA domain protein [Neosartorya fischeri NRRL 181]
gi|119408356|gb|EAW18305.1| IdgA domain protein [Neosartorya fischeri NRRL 181]
Length = 796
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 137/343 (39%), Gaps = 61/343 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA LGS S +G D++G L K GL T G++
Sbjct: 431 IGQSLGGVGHNVAIASHYLGSSVLFCSVVGDDLSGRAALATLKEEGLPTAGVQILPASSG 490
Query: 58 IDTAVVSNILDVNGELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA I D +L A+A + E E L D + + + ++VDAN SP
Sbjct: 491 ARTAQYVAINDAKRDLVVAMADMGIMELPEHVLDFDEFWEPLIRRTQPQWVVVDANWSPA 550
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSPNEDE 159
LA +A + V FEPVS KSRR+ S I++ +PN+ E
Sbjct: 551 VLARWIAVAKQHGARVAFEPVSTAKSRRLFSKTSEADAVIEPAGAVPNNAISLAAPNQYE 610
Query: 160 LVAM------ANALSGENMFRPID---------RNK----HSAESLFQTLKPAILVLLEK 200
L AM + E +R ID R++ +AE + Q + P + L
Sbjct: 611 LSAMYTTARESGLFESEGWWRIIDAMGMSASGSRDRLVAMTTAELVDQGI-PQQSIQLLP 669
Query: 201 GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEP 260
I ++ LG+ GVL+ R+ + PY SR S E
Sbjct: 670 FIPCIITKLGAQGVLVTQLLRPGDARLTSPDSAPYIL--------------SRASPTDEL 715
Query: 261 AGGSQFFAVHFPA----LPASVVRLTGAGDCLVGGTLASISSG 299
GG + FP+ +V + GAGD L+G +A ++ G
Sbjct: 716 IGG--VYMRLFPSAGVLADGEIVSVNGAGDTLLGAVVAGLAKG 756
>gi|440298811|gb|ELP91442.1| hypothetical protein EIN_155590 [Entamoeba invadens IP1]
Length = 691
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV N+AE + +G++ +S LG D GN+ + ++ + T GI + TAV S
Sbjct: 400 GGVGHNMAENIHLIGNQMTFLSVLGNDFLGNVFRKSFEKIHMETSGIVLS-EFPTAVYSG 458
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+++ +G L A V S+ K +T D I +++ +++ +++D N L K+
Sbjct: 459 VINQDGSLIAGVIDKRSL-KGMTVDKIEKYMDLVTNCEYVVIDTNFE---LDVIKKVILS 514
Query: 126 CNIPVWFEPVSVTKSR-RITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
VW EP T + I +++ I SPN E+ +A + ++ + + + E
Sbjct: 515 AKGKVWLEPTGGTSLKILIPEILERIDYFSPNNFEIEWLAKRIG----YKGGECDGGNIE 570
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + + + +G++ +++ LG DGVL+ KE
Sbjct: 571 ECIKMSE----LFVARGVKNLIVKLGPDGVLVVKKE 602
>gi|170683507|ref|YP_001744354.1| hypothetical protein EcSMS35_2307 [Escherichia coli SMS-3-5]
gi|170521225|gb|ACB19403.1| kinase, pfkB family [Escherichia coli SMS-3-5]
Length = 362
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + R DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLSEL----EILWGQPITRDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSQKD 288
>gi|145348439|ref|XP_001418656.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578886|gb|ABO96949.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 382
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 142/328 (43%), Gaps = 62/328 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGS-KPYMISALGLDMAGNILLEHWKSAGLSTE---GIRRQK 56
V+ +GGV NVA + + + ++SA G D G + E W++ + G+R +
Sbjct: 54 VDRGVGGVGLNVACACAATSAARVRLVSACGDDADGASVREAWRARARGRDDGAGVRARA 113
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
T V + D +GE+ A+VA V+ +E+ + +W ++ A V+++D NLS +
Sbjct: 114 GARTGRVVAVTDESGEIVASVADVDVVERDVDEEWCEKYASDARGARVVVIDGNLSARGI 173
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVVKY------ITVVSPNEDELVAMANAL--- 167
A+ + AA WFEPVSV K+ RI + SPN EL +ANA+
Sbjct: 174 RAARRAAA--TTATWFEPVSVAKAVRIVESGDAGRPMVGVRWCSPNAAELRELANAVRRS 231
Query: 168 --SGENM----FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
G M F P + +A L I +L G VVLTLGS GV++ S
Sbjct: 232 WAKGSPMSPCPFNP-ELEFDAANDALDALASDIATVLAAGCERVVLTLGSLGVIVSS--- 287
Query: 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP-ASVVR 280
P G + S H PA S
Sbjct: 288 -----------APDGDA-------------------------SNAEHAHVPAFAVKSAAS 311
Query: 281 LTGAGDCLVGGTLASISSGLDVMQSVAV 308
L GAGD LVGG + +++ G+D M+++A+
Sbjct: 312 LIGAGDALVGGAVGALARGVDEMRAIAI 339
>gi|432895184|ref|ZP_20106904.1| pseudouridine kinase [Escherichia coli KTE165]
gi|431421551|gb|ELH03763.1| pseudouridine kinase [Escherichia coli KTE165]
Length = 313
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS A+
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEAMVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|345300083|ref|YP_004829441.1| PfkB domain-containing protein [Enterobacter asburiae LF7a]
gi|345094020|gb|AEN65656.1| PfkB domain protein [Enterobacter asburiae LF7a]
Length = 313
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL + G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTAVGDDFYGQSLLAQTRQYGVHVDKCFLVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I + ++ ++ Q + I SA+ ++ D N+S LA
Sbjct: 95 SCYLSLLDNTGEMLVAINDM-TISEQISVAFLEQHLDFIRSAAAIIADCNISEETLAWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ + + PV+ +PVS K +I + I + PN E A LSG + D K
Sbjct: 154 ENSGDA--PVFVDPVSAWKCVKIRGRLNKIHTLKPNRLE----AETLSGITLSGRDDVAK 207
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+A F E G+ +VL++G DGV
Sbjct: 208 VAA--WFH----------ENGLTRLVLSMGGDGV 229
>gi|170760670|ref|YP_001787091.1| PfkB family kinase [Clostridium botulinum A3 str. Loch Maree]
gi|169407659|gb|ACA56070.1| kinase, PfkB family [Clostridium botulinum A3 str. Loch Maree]
Length = 319
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH K G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSKKIGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ + VA ++SI+K + +I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSGVADMKSIDK-MNSQFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K++ I ++KY + PN E A LSG + + I+ K + +
Sbjct: 160 KGKTKFILDPVSAEKAKNIKPLIKYFHTIKPNIHE----AEVLSGFKI-KTIEELKKAGK 214
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
F++L G+ V ++L ++G+ +K
Sbjct: 215 H-FRSL----------GVENVFISLDAEGIYYKNK 238
>gi|293376596|ref|ZP_06622824.1| kinase, PfkB family [Turicibacter sanguinis PC909]
gi|292644822|gb|EFF62904.1| kinase, PfkB family [Turicibacter sanguinis PC909]
Length = 317
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 33/222 (14%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G IS LG D G +LEH KS + T
Sbjct: 41 FGGVCRNIAENMARVGGNTKFISILGNDEKGKSILEHAKSMNFDMSDSLVVEGASTPTYV 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +A+ + +I+ + +I I A + A+ +P + K A
Sbjct: 101 AILDENGEMVSAIVDI-NIDHHMDAAFIDSKASVIEGAEYMFFGAD-NPECIEYIVKKYA 158
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+PVS K++ I ++ Y V P N+H AE
Sbjct: 159 -GKTKFVLDPVSAAKAKNIKHLLPYFHTVKP-----------------------NRHEAE 194
Query: 185 SL-------FQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L + ++ A +E G+ V ++L +DGV C++
Sbjct: 195 VLCDCEIKTIEDVRRAGAYFMEVGVENVFISLDADGVYYCNQ 236
>gi|283785974|ref|YP_003365839.1| pyrimidine kinase [Citrobacter rodentium ICC168]
gi|282949428|emb|CBG89041.1| putative pyrimidine kinase [Citrobacter rodentium ICC168]
Length = 313
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++A+G D G LL +G+ + T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKHCWLMTAVGDDFYGRSLLAQTHQSGVQVDKCLIVPGEST 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + ++ ++ Q I A V++ D N+S AL
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHISAAFLAQHTDFIRGAKVIVADCNISEQALEWLL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A + PV+ +PVS K +I + I + PN E A LSG + D K
Sbjct: 154 ENAGDA--PVFVDPVSAWKCGKIRHRLSQIHTLKPNRLE----AETLSGIALAGREDVAK 207
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+A F E G+ +VL++G DGV K+
Sbjct: 208 VAA--WFH----------EHGLNRLVLSMGGDGVYYSEKQ 235
>gi|404371521|ref|ZP_10976825.1| hypothetical protein CSBG_01178 [Clostridium sp. 7_2_43FAA]
gi|226912351|gb|EEH97552.1| hypothetical protein CSBG_01178 [Clostridium sp. 7_2_43FAA]
Length = 314
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+AE ++++ IS LG D G +LE+ K G + E +D T
Sbjct: 40 LGGVCRNIAENLARVNVNTEFISILGGDDQGRNILENSKLIGYNMEHSLILEDEYTPTYM 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ +GE+ +A+ ++S++K + +I H I +A ++D++ P L
Sbjct: 100 AILNEHGEMESAIVDMDSLDK-MESSFIDSKSHIIENAEYTILDSD--NPELLEYILTTF 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS TK+ +I ++KY V PN E L G + D
Sbjct: 157 KGKTKFVLDPVSATKAEKIKHLIKYFHTVKPNRLE----TEVLCGFKIENDDD------- 205
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
LK A L G++ V ++L +DG+
Sbjct: 206 -----LKRAGDYFLSLGVKNVFISLDADGI 230
>gi|218549580|ref|YP_002383371.1| hypothetical protein EFER_2252 [Escherichia fergusonii ATCC 35469]
gi|218357121|emb|CAQ89754.1| putative kinase [Escherichia fergusonii ATCC 35469]
Length = 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 70 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 129
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I ++ ++ Q I A+V++ D NLS AL
Sbjct: 130 SSYLSLLDNTGEMLVAINDM-NISDCISAKFLSQHQEFIRGANVIVADCNLSEEALVWVL 188
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 189 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 246
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 247 FH-----------------QHGLNRLVLSMGGDGV 264
>gi|138894895|ref|YP_001125348.1| ribokinase family sugar kinase [Geobacillus thermodenitrificans
NG80-2]
gi|196248536|ref|ZP_03147237.1| PfkB domain protein [Geobacillus sp. G11MC16]
gi|134266408|gb|ABO66603.1| Sugar kinases, ribokinase family [Geobacillus thermodenitrificans
NG80-2]
gi|196212261|gb|EDY07019.1| PfkB domain protein [Geobacillus sp. G11MC16]
Length = 321
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG ++S +G D G L++ S + T + R + +T +
Sbjct: 49 GGVARNIAENIGRLGQNVALLSVVGGDHDGQWLIDA-TSPYVDTRMVTRIPEANTGAYTA 107
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+A + +I + +W++Q S +++D N ++ + +
Sbjct: 108 VLDERGEMVLALADM-AIYDTVRNEWLKQRWLKFGPISAVVLDTNFPTDVISWVIEQCRQ 166
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ VSV K +R+ +V+ +T + N+ E +A+A R +D + ES
Sbjct: 167 DRLPLCVVTVSVPKVKRLPTVLSGVTWLVTNQAEAMALAGK-------RRLD---DAIES 216
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LF+ G+ +V+T G++GV+ +++
Sbjct: 217 LFRL-----------GVENIVITRGAEGVVYATRK 240
>gi|346322538|gb|EGX92137.1| IdgA domain protein [Cordyceps militaris CM01]
Length = 1392
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 145/350 (41%), Gaps = 59/350 (16%)
Query: 1 VNYVLGGVARNVAEC--MSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI-----R 53
++ +GGV RNVA ++ GS S +G D+AG +L ++GL+T I +
Sbjct: 428 ISQSVGGVGRNVAVAAHLASGGSGVQFCSLVGDDVAGQTVLTSLNASGLNTSSIMKLNHQ 487
Query: 54 RQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
+ + TA + D N +L A+A + K D R + S L+VD N +P
Sbjct: 488 KYPEGRTAQYVAVNDGNKDLVLAMADMNIFSKNSFSDHWRSTVA-ASKPKWLVVDGNWAP 546
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-----------YITVVSPNEDELVA 162
P + + + + V FEPVS KS+ + + I++ SPN EL A
Sbjct: 547 PEIRNWIRAGEDNDAKVAFEPVSAEKSKSLFCPERGLPRLNLYPEPSISLASPNTYELAA 606
Query: 163 MANALSGENMFRPID-------------RNKH---SAESLFQTLKPAILVLLEKGIRLVV 206
M N F P+D R++ ++ L P + L I ++
Sbjct: 607 MYNTAKDNGYFEPMDWFEVIDAFGMRGARDRFIHLTSVELTDAGVPIQTINLLPYIPTIL 666
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LGS GVL+ + L K P RD + + +R S P G +
Sbjct: 667 TKLGSKGVLMTAI---------LGKDDPRLRDRDEEEFILTR------SPPTHPVVGGVY 711
Query: 267 FAVHFPALPA--SVVRLTGAGDCLVGGTLASISSG------LDVMQSVAV 308
+ FPA+ + +V + G GD +G ++ ++ G +DV Q AV
Sbjct: 712 MRL-FPAVESVKDIVSVNGVGDTFLGVLISGLAQGGRVDKLVDVAQRGAV 760
>gi|160879183|ref|YP_001558151.1| ribokinase-like domain-containing protein [Clostridium
phytofermentans ISDg]
gi|160427849|gb|ABX41412.1| PfkB domain protein [Clostridium phytofermentans ISDg]
Length = 318
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 122/315 (38%), Gaps = 65/315 (20%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE ++++G IS +G D G LLEH L + K T
Sbjct: 41 FGGVCRNIAENLARVGVNTKFISVVGDDEKGRSLLEHANKMQLDMKDSLIVKGESTPTYM 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ GEL A + ++ E ++T ++I A +++DA+ +PP L K
Sbjct: 101 AILNEEGELEAGIVDMKVTE-YITKEFIDSKAELFEQAEYVVLDAD-NPPLLEYVLK-KF 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+PVS TK++ + ++ Y+ + PN E A L G PI K
Sbjct: 158 YGKTKFIMDPVSSTKAKSVKHLIPYLHTIKPNRIE----AEILCG----FPIKDMKD--- 206
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
L+ A L++G++ V ++L GV +E GL KT
Sbjct: 207 -----LRKAGKYFLDQGLQKVFISLDMQGVYYNDRE-----SEGLLKTD----------- 245
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
SVV +TGAGD V G GLD
Sbjct: 246 ------------------------------KVSVVNVTGAGDSCVAGLGFGYMKGLDTQD 275
Query: 305 SVAVDDAKTVYAAAN 319
++ + A +V A+
Sbjct: 276 TLKIAIAMSVITIAH 290
>gi|400593389|gb|EJP61339.1| indigoidine synthase A like protein [Beauveria bassiana ARSEF 2860]
Length = 786
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 148/363 (40%), Gaps = 59/363 (16%)
Query: 1 VNYVLGGVARNVAEC--MSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI-----R 53
++ +GGV RNVA ++ GS S +G D+AG+ +L +++GL T I R
Sbjct: 428 ISQSIGGVGRNVAVAAHLASGGSGVQFCSMVGDDVAGHTVLTSLEASGLDTSSIMKLDHR 487
Query: 54 RQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
+ + TA + D N +L A+A + K D R + S L+VD N +P
Sbjct: 488 QHPEGRTAQYVAVNDGNKDLVLAMADMNIFSKHSFSDHWRSTVA-TSKPKWLIVDGNWAP 546
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKS-------RRITSVVKY----ITVVSPNEDELVA 162
P + + E V FEPVS KS R + + Y I++ SPN EL A
Sbjct: 547 PQIRNWIRAGEENGAKVAFEPVSAEKSQGLFCPERGLPRLNLYPESSISLASPNTYELAA 606
Query: 163 MANALSGENMFRPID-------------RNKH---SAESLFQTLKPAILVLLEKGIRLVV 206
M A F P+D R++ ++ L P + L I ++
Sbjct: 607 MHTAAKENGYFEPMDWFEVIDAFGMRGARDRFVHLTSVELTDAGVPIQTIQLLPYIPTIL 666
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LGS GVLL + L K P RD + +R S P G +
Sbjct: 667 TKLGSKGVLLTAI---------LGKDDPRLRDRDEEAFILTR------SPPTHPVVGGVY 711
Query: 267 FAVHFPALPA--SVVRLTGAGDCLVGGTLASISSG------LDVMQSVAVDDAKTVYAAA 318
+ FP + +V + G GD +G + ++ G +DV Q AV K+ + +
Sbjct: 712 MRL-FPPVETVKDIVSVNGVGDTFLGVLASGLARGGRVDKLVDVAQRGAVLTLKSAESVS 770
Query: 319 NVL 321
+L
Sbjct: 771 PLL 773
>gi|417708196|ref|ZP_12357229.1| hypothetical protein SFVA6_3014 [Shigella flexneri VA-6]
gi|420332137|ref|ZP_14833793.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-1770]
gi|333001296|gb|EGK20864.1| hypothetical protein SFVA6_3014 [Shigella flexneri VA-6]
gi|391251032|gb|EIQ10251.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-1770]
Length = 362
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++VD NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLVDCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|403389324|ref|ZP_10931381.1| PfkB family kinase [Clostridium sp. JC122]
Length = 313
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE ++++G IS +G D G ++EH K G E +D T
Sbjct: 41 FGGVCRNIAENLARVGVDTQFISVIGDDKNGKDIIEHSKQIGYCMENSLMLEDSSTPTYM 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L+ +GE+ +AV +ES K L +I I ++ ++D++ P L
Sbjct: 101 AVLNEHGEMVSAVVDMESANK-LDSKFIDSKADVIRNSEYTVLDSD--NPELLKYILETF 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +P+S K+ I ++ Y + PN E A AL G F+ +N A
Sbjct: 158 KGETKFILDPISSAKAANIKHLIPYFHTIKPNRLE----AEALCG---FKI--KNMEDA- 207
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
K A LL +G+ V ++L DGV C+
Sbjct: 208 ------KRAGKFLLNQGVENVFISLDVDGVYYCN 235
>gi|323489797|ref|ZP_08095022.1| carbohydrate kinase, PfkB family protein [Planococcus donghaensis
MPA1U2]
gi|323396535|gb|EGA89356.1| carbohydrate kinase, PfkB family protein [Planococcus donghaensis
MPA1U2]
Length = 363
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARNVAE + +LG+ ++S +G D L+E S+ +STE + + + T +
Sbjct: 92 VGGVARNVAENLGRLGNSVKLLSIVGNDPEWE-LIEAASSSFMSTELTKAIEGLSTGTYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ +GE+ A+A ++ I F+TP ++ + + +A+ L++D N + KIA
Sbjct: 151 AILEPDGEMVIAMADMK-IYDFMTPAYLSKNESALLAAAFLVIDLNCPRDTVEYVRKIAL 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
IP+ PVS K ++ + ++ + N DE + + + ID S E
Sbjct: 210 ANKIPLAVIPVSAPKMNHLSDDLSGVSWLILNRDE--------ASKYLQLSID----STE 257
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
Q A+ L+E+G VV+T G DG L
Sbjct: 258 EWHQ----AVQQLVERGAESVVITGGKDGAL 284
>gi|416898200|ref|ZP_11927764.1| hypothetical protein ECSTEC7V_2571 [Escherichia coli STEC_7v]
gi|417115276|ref|ZP_11966412.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2741]
gi|422780924|ref|ZP_16833709.1| pfkB family protein carbohydrate kinase [Escherichia coli TW10509]
gi|422799445|ref|ZP_16847944.1| pfkB family protein carbohydrate kinase [Escherichia coli M863]
gi|422830149|ref|ZP_16878310.1| hypothetical protein ESNG_02815 [Escherichia coli B093]
gi|323968089|gb|EGB63499.1| pfkB family protein carbohydrate kinase [Escherichia coli M863]
gi|323977642|gb|EGB72728.1| pfkB family protein carbohydrate kinase [Escherichia coli TW10509]
gi|327252404|gb|EGE64063.1| hypothetical protein ECSTEC7V_2571 [Escherichia coli STEC_7v]
gi|371606839|gb|EHN95429.1| hypothetical protein ESNG_02815 [Escherichia coli B093]
gi|386140695|gb|EIG81847.1| carbohydrate kinase, PfkB family [Escherichia coli 1.2741]
Length = 362
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + R DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQPITRDADRNA-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSQKD 288
>gi|365108366|ref|ZP_09336267.1| pseudouridine kinase [Citrobacter freundii 4_7_47CFAA]
gi|363640722|gb|EHL80172.1| pseudouridine kinase [Citrobacter freundii 4_7_47CFAA]
Length = 313
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG ++++ +G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNSWLLTVVGNDFYGQSLLAQTNQSGVHVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI + ++ ++ Q I A V++ D N+S A+A
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SITEHISAVFLSQHHDFIRQAKVIVADCNISEEAMAWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A + +PV+ +PVS K +I + I + PN E A LSG + D K
Sbjct: 154 ENAGD--VPVFVDPVSAWKCVKIRERLGQIHTLKPNRLE----AETLSGIALSGRDDVGK 207
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+A F ++G+ +VL++G DGV
Sbjct: 208 VAA--WFH----------DRGLNRLVLSMGGDGV 229
>gi|328703075|ref|XP_003242085.1| PREDICTED: uncharacterized sugar kinase yeiI-like [Acyrthosiphon
pisum]
Length = 322
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 136/325 (41%), Gaps = 75/325 (23%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNIL---LEHWKSAGLSTEGIRRQKDIDT 60
V GGV RN+A+ + + G ++A+G D G + LEH + +S G D T
Sbjct: 31 VSGGVGRNIADALGRFGHDVCFLTAVGDDSDGRSIIKSLEHINTDKISVVG-----DQST 85
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + G+ A + +E K +T D I++ I + + ++++D N+ P +
Sbjct: 86 SWCVVFQNRQGDCMACIGDMEC-HKRITIDMIKENIDALYKSPLVVIDGNVCPETMEFVI 144
Query: 121 KIAAECNIPVWFE--PVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGE-------- 170
E NIPV+FE ++V +++ K ++ +SPN EL ++ L+ E
Sbjct: 145 GFCNEENIPVYFETTDIAVASQPFHSNMWKGLSFMSPNLKELQEISKKLTAEVPVNYAIK 204
Query: 171 ------NMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSS 224
+ F DR +S++ I+ L I ++++TLG G+LL S++ +
Sbjct: 205 VSINGGDEFDTRDRIMNSSKD--------IVCKLISHIPVIMVTLGDKGLLLASRQSDDT 256
Query: 225 MRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASV-VRLTG 283
+ + VH+P+ V ++G
Sbjct: 257 VSL-----------------------------------------VHYPSQKIETPVSVSG 275
Query: 284 AGDCLVGGTLASISSGLDVMQSVAV 308
AGDCL G ++ + G + VA+
Sbjct: 276 AGDCLCAGYISGVLQGKSQDECVAL 300
>gi|387817965|ref|YP_005678310.1| sugar kinase in cluster with indigoidine synthase indA , PfkB
family of kinases [Clostridium botulinum H04402 065]
gi|322806007|emb|CBZ03574.1| hypothetical sugar kinase in cluster with indigoidine synthase indA
, PfkB family of kinases [Clostridium botulinum H04402
065]
Length = 319
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKMGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + ++I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSEFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR--PIDRNKHS 182
+ +PVS K++ I ++KY + PN + A LSG FR I+ K +
Sbjct: 160 KGKTKFILDPVSAEKAKNIKPLIKYFHTIKPN----IHEAEVLSG---FRIETIEDLKKA 212
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
E F++L G+ V ++L ++G+ +K
Sbjct: 213 GE-YFESL----------GVENVFISLDAEGIYYKNK 238
>gi|147799724|emb|CAN63901.1| hypothetical protein VITISV_031685 [Vitis vinifera]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNIL 38
V+YV GGVARN+AECMSKLG+KPYMISALGLDMA + L
Sbjct: 71 VHYVPGGVARNIAECMSKLGTKPYMISALGLDMAASPL 108
>gi|432417631|ref|ZP_19660236.1| pyrimidine kinase [Escherichia coli KTE44]
gi|430939144|gb|ELC59361.1| pyrimidine kinase [Escherichia coli KTE44]
Length = 362
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+++ DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQSITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|389817995|ref|ZP_10208488.1| putative carbohydrate kinase [Planococcus antarcticus DSM 14505]
gi|388464139|gb|EIM06473.1| putative carbohydrate kinase [Planococcus antarcticus DSM 14505]
Length = 364
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARNVAE + +LG ++S +G D N+ +E S +STE + + T +
Sbjct: 92 VGGVARNVAENLGRLGHSVKLLSIVGNDPEWNV-IESASSLFMSTELTKAIDGLSTGTYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ +GE+ A+A ++ I FLTP+ I + + SA+ L++D N + ++A
Sbjct: 151 AILEPDGEMLLAMADMK-IYDFLTPELISKNDSTLLSAAFLVIDLNCPLETVEYVRQLAF 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
IP+ PVS K R+++ + I+ + N DE + + + PID
Sbjct: 210 TNKIPLAVIPVSAPKMDRLSNDLTGISWLILNRDE--------ASKYLQMPIDSK----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
A+ LL+ G VV+T G DG +
Sbjct: 257 ---DDWHLAVQQLLDMGAAAVVVTGGKDGAI 284
>gi|74312688|ref|YP_311107.1| hypothetical protein SSON_2222 [Shigella sonnei Ss046]
gi|420363854|ref|ZP_14864738.1| pseudouridine kinase [Shigella sonnei 4822-66]
gi|73856165|gb|AAZ88872.1| putative kinase [Shigella sonnei Ss046]
gi|391294098|gb|EIQ52351.1| pseudouridine kinase [Shigella sonnei 4822-66]
Length = 313
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A ++ LG +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAHNLALLGKNAWLLSAVGGDFYGQSLLAQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + SI ++ +++ Q I A V++ D NLS L
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-SISDCISAEFLAQHQEFIRGAKVIVADCNLSEEVLVWVL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
+ + E PV+ +PVS K +I + I + PN E ++ ALSG +
Sbjct: 154 ENSGE--TPVFIDPVSAWKCVKIRDHLSKIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>gi|374324360|ref|YP_005077489.1| ribokinase [Paenibacillus terrae HPL-003]
gi|357203369|gb|AET61266.1| ribokinase [Paenibacillus terrae HPL-003]
Length = 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E + + ++ + + T V +
Sbjct: 55 GGVARNVAENLGRLSQQAILLTAVGDDAEGEFIVEQSRHY-MKVVPMQVKGEPSTGVYTA 113
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GEL A A +E ++ + P I + I+S+ ++++D N S +A++ ++ E
Sbjct: 114 LLDERGELIVATAEMEIYDQ-IRPSVIFENTPLIASSRLVLLDTNFSMNVIASTIRLCHE 172
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP+ VS +K RR+ + + + N+ E A + G + D+ A
Sbjct: 173 HRIPLVVSSVSASKMRRLPRNLNGVGWLVCNQVE----AESYLGIEL--QDDQQMLDATR 226
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V+L G+D VL S++
Sbjct: 227 IFHQL----------GVQNVILIRGADSVLFASQD 251
>gi|167855449|ref|ZP_02478214.1| probable carbohydrate kinase [Haemophilus parasuis 29755]
gi|167853443|gb|EDS24692.1| probable carbohydrate kinase [Haemophilus parasuis 29755]
Length = 367
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
+GGVARNVAE + +LG K IS +G D ++ + S + + + T
Sbjct: 91 TIGGVARNVAENLGRLGQKVSFISTVGNDPEWE-RIKSFSSEFMDMNNVITVEGQSTGCY 149
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ +LD GE+ +A + SI LTP+ + + I +A ++ D N + CK A
Sbjct: 150 TALLDKEGEMYLGLADM-SIYDSLTPEALNKHTALIKNARCIVADLNCPKATIEYLCKSA 208
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+IP+ VS K R+ ++ ++ + N+ EL A + L +D +
Sbjct: 209 EGYHIPLVLIAVSEPKMDRLPQDLQGVSCLIINKGELAAYLDML--------LDTD---- 256
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
Q ++ A +LL KG++ +VLT GS +L S++
Sbjct: 257 ----QKIEEAAKILLAKGVKQIVLTAGSKAILSASQD 289
>gi|412986599|emb|CCO15025.1| predicted protein [Bathycoccus prasinos]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 3 YVLGGVARNVAECMSKLGS--------------KPYMISALGLDMAGNILLEH-WKSAGL 47
+ GGV RN+ E + L S +M S +G D G ++E + +
Sbjct: 30 HTPGGVGRNICETVGALVSIWMSSSAGRNKNRLSVHMHSQIGEDDVGRKMVEQLQRELRV 89
Query: 48 STEGIRRQKDIDTAVVSNILDVNG---ELAAAVASVESIEKFLTPDWIRQFIHHISSASV 104
+ ++ T+ V +LD EL A VA V +E + +R S
Sbjct: 90 DVKDVKMDSSSRTSTVVALLDDQDGERELFACVADVADVE--IPIGRVRSSSRIGEGQSR 147
Query: 105 LMV-DANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163
+V DANLS +L E N V+FEP SVTKS +I S+V + SPN EL M
Sbjct: 148 FVVCDANLSEESLRNVVSGKDEQNEHVFFEPTSVTKSVKIASIVNVVDATSPNAKELREM 207
Query: 164 ANALSGE----NMFRPIDRNKH----SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
ANAL + P N H SA+ L + +L G+++V LTLG G +
Sbjct: 208 ANALRRSLAPGSPPSPCPFNPHLKFASAQEALNVLAGDLQILHSHGVKVVFLTLGELGSI 267
Query: 216 LCS 218
+ S
Sbjct: 268 VSS 270
>gi|308451661|ref|XP_003088754.1| hypothetical protein CRE_30315 [Caenorhabditis remanei]
gi|308245461|gb|EFO89413.1| hypothetical protein CRE_30315 [Caenorhabditis remanei]
Length = 668
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKS------------AGLSTEGI 52
+GGVARN AE + +LG ISA+G D G ++ + S + I
Sbjct: 368 MGGVARNHAEALGRLGCDSIFISAIGDDSNGQFFRQNSEKMVRALSRFLPIPPSASFQDI 427
Query: 53 RRQKDIDTAVVSNILDVN--GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN 110
R K I L VN G + + + E + LTP I + + ++ +++D+N
Sbjct: 428 TRVKVITNKPTCTYLAVNVRGNVKYGIVTSEPLLSTLTPALIEKNEEALETSDFILLDSN 487
Query: 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
L P + +IA + VW EP + K +++ T +V +T SPN +E + A
Sbjct: 488 LPVPLMTKVLEIAKKHEKQVWLEPTDIDKVKKVFATGLVDAVTATSPNANEFLEWA 543
>gi|375088270|ref|ZP_09734610.1| hypothetical protein HMPREF9703_00692 [Dolosigranulum pigrum ATCC
51524]
gi|374562308|gb|EHR33638.1| hypothetical protein HMPREF9703_00692 [Dolosigranulum pigrum ATCC
51524]
Length = 370
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV RN+AE + +L ++S G D A +I+ E + + ++ + + T+ S
Sbjct: 93 IGGVGRNIAENLGRLDQAVTLLSVAGYDNAYDIIKE-YTAPYVNLSQVTQLLHETTSSYS 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD +GE+ A+A ++ I + +T +WI Q + A L+VD N++ A+ A +A
Sbjct: 152 AVLDHHGEMLLALADMD-ICRHMTKEWINQHHSQLVQAESLVVDLNINLEAMQAIIDMAR 210
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+I + PVS K + + + + N DE A + + + H
Sbjct: 211 HHDINLVIVPVSAPKMTHLPDQLDGVNWIIVNRDESEA----------YFGYESSTH--- 257
Query: 185 SLFQTLKPAILV--LLEKGIRLVVLTLGSDGVLLCSKE 220
+KP LV L+ G++ VVLT G D + L S +
Sbjct: 258 -----IKPTTLVQNWLKTGVKHVVLTCGKDALYLGSHD 290
>gi|198423740|ref|XP_002125817.1| PREDICTED: similar to ribokinase [Ciona intestinalis]
Length = 313
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 3 YVLGGVARNVAECM--SKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
YV G + +C+ +KLG+K M+S +G D G +E++K+ ++T+ + + K+ T
Sbjct: 35 YVTGFGGKGANQCVAATKLGAKTSMVSRVGEDSHGEQYIENFKTLKVNTDHVIKTKNETT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V + V + + + V L+ D + Q + I + VL+ + P +
Sbjct: 95 GVAP--ITVADDGSNCLVIVPGANMILSSDDVEQAYNCIKNCKVLLCQLEVQPSTSLHAL 152
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K+A I F P ++ +Y V+ PNE E A AL+G
Sbjct: 153 KLAKSLGITTIFTPAPAPVAKLDEKFFEYADVICPNETE----AEALTG----------- 197
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
A + ++ K A VL++KG ++ ++TLG +G + K + + KP
Sbjct: 198 -IAVTDTESGKKAAQVLVKKGCQIGIVTLGQNGCVFAEKSTNKVVHVPAPAVKP------ 250
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
V + ++GA+ F+ FP LP
Sbjct: 251 ----VDTTGAGDAFTGAL------AFYLARFPELP 275
>gi|269123334|ref|YP_003305911.1| PfkB domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314660|gb|ACZ01034.1| PfkB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 306
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 67/316 (21%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARN+ E ++ L I+ +G D LL + + + + +
Sbjct: 34 FGGVARNITENLAHLNLDTKFIAPIGDDEFSISLLNYMNNKKVDMSNCLVIPNESLSTYL 93
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++L+ E+ A+AS+ +EK L D+I+ +I+ + VL++D NL + + +
Sbjct: 94 SVLNDENEMIVAIASMSILEK-LDIDYIKSKEKYINESDVLVIDTNLRQDVI----EYIS 148
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N + + VS TK+++I +++ I + PN+ E A L+G N+ E
Sbjct: 149 TFNKKIIVDLVSTTKTKKIKNILNKIHSIKPNKIE----AELLTGINI--------KDEE 196
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
S+ + LLE+G++ + +TLG +G+ +KE + GL
Sbjct: 197 SMILAGQK----LLEQGVKNIYITLGKEGLFYMNKE-----KHGL--------------- 232
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
++ P + A V +TGAGD G S+ +G D+ +
Sbjct: 233 ------------------------INNPEIKA--VDITGAGDAFTAGIAYSVKNGYDIEK 266
Query: 305 SVAVDDAKTVYAAANV 320
S + +V N+
Sbjct: 267 SAKISMTMSVINVTNL 282
>gi|195437530|ref|XP_002066693.1| GK24623 [Drosophila willistoni]
gi|194162778|gb|EDW77679.1| GK24623 [Drosophila willistoni]
Length = 704
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 110/222 (49%), Gaps = 20/222 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID----TA 61
GGV RN+AE + KL + +ISA+G D G L + L + ++ +D T+
Sbjct: 384 GGVGRNIAEGLYKLHGQVNLISAIGRDKLGQSLCQ------LMPKEMQNHLILDENQATS 437
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ S + D +G+ + +++ + P+ + Q + A ++++D+N+S ++ +
Sbjct: 438 LCSLVFDKSGDCKLILGNMDIHSISINPELLLQQSQLFAQAPLVIMDSNISVESMETVLR 497
Query: 122 IAAECNIPVWFEPVSV-------TKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
+AA+ N+PV+FEP + T S ++T ++I ++ PN EL + ++GE +
Sbjct: 498 LAAKYNLPVFFEPTDMFIAGKPFTLSPQLT---QHIRLIKPNLKELQTIVETITGEKVSP 554
Query: 175 PIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
+ S + ++ +++ ++ TLG GVLL
Sbjct: 555 SATLPAANERSQLLSATKELVKKIDRHFNCIISTLGDHGVLL 596
>gi|406666191|ref|ZP_11073960.1| Pseudouridine kinase [Bacillus isronensis B3W22]
gi|405386048|gb|EKB45478.1| Pseudouridine kinase [Bacillus isronensis B3W22]
Length = 362
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG++ +I+ +G D + ++ KS ++ + + + D +T +
Sbjct: 92 VGGVARNIAENLGRLGNRVSLITVMGEDHDSAFIEQNCKSM-MNVDLVEKLNDYNTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD GEL ++A++ +I L P +++ + +AS +++D N + A
Sbjct: 151 AVLDNMGELVISMANM-AIYDQLLPSILKKHEAILQNASCIVIDLNSPLETVEYIRNFAI 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E NI + PVS K + ++ + I+ N DE + N E
Sbjct: 210 ERNIALAVIPVSSPKMKNMSQDLHGISYFICNRDEAESYLNV---------------KLE 254
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ Q K A+ +LL+KG VVLTLG GV++ ++
Sbjct: 255 TYSQYEK-AVNMLLQKGAEHVVLTLGEHGVMVGNE 288
>gi|121715286|ref|XP_001275252.1| IdgA domain protein [Aspergillus clavatus NRRL 1]
gi|119403409|gb|EAW13826.1| IdgA domain protein [Aspergillus clavatus NRRL 1]
Length = 790
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 136/337 (40%), Gaps = 53/337 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA S LGS S +G D++G L K GL T G++
Sbjct: 429 IGQSLGGVGHNVAIASSYLGSSVLFCSVVGDDLSGCAALSTLKEEGLPTAGVQILPPSSG 488
Query: 58 IDTAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA I D +L A+A +E E L D + + + ++VDAN SP
Sbjct: 489 ARTAQYIAINDAKRDLFVAMADMGIMELPENALDFDGFWEPLVRRTRPEWVVVDANWSPA 548
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI---------TSVVKY--ITVVSPNEDELVAM 163
LA +A E V FEPVS KSRR+ V + I++ +PN+ EL M
Sbjct: 549 VLARWVAVAKEHGARVAFEPVSTAKSRRLFGKDAAIGPAGAVPHNAISLAAPNQLELTTM 608
Query: 164 ANALSGENMF------RPID---------RNK---HSAESLFQTLKPAILVLLEKGIRLV 205
A + +F R ID R++ ++ L P + L I +
Sbjct: 609 YAAARDQGLFDSEGWWRIIDAMGMSSAGSRDRLVAMTSAELVDAGIPQQSIQLLPFIPCI 668
Query: 206 VLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQ 265
+ LG+ GVL+ +R+ + P+ SR S + G
Sbjct: 669 LTKLGARGVLVTQLLRPGDLRLTAPDSAPHILSR---------------SPPTDELVGGV 713
Query: 266 FFAVHFPA---LPASVVRLTGAGDCLVGGTLASISSG 299
+ + PA +V + GAGD L+G +A ++ G
Sbjct: 714 YMRLFPPAAVLADGDIVSVNGAGDTLLGAVVAGLAKG 750
>gi|331673685|ref|ZP_08374448.1| putative kinase [Escherichia coli TA280]
gi|331068958|gb|EGI40350.1| putative kinase [Escherichia coli TA280]
Length = 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + ++ A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQIVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|88798882|ref|ZP_01114464.1| Sugar kinase, ribokinase family protein [Reinekea blandensis
MED297]
gi|88778362|gb|EAR09555.1| Sugar kinase, ribokinase family protein [Reinekea blandensis
MED297]
Length = 314
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ +++LG ++S G D+ I+ + +SAG+ T +D A +
Sbjct: 42 GGVGRNIADNLARLGLSSTLLSVFGNDIGRTIIEKSCQSAGVDTS---PSLIVDGAATGS 98
Query: 66 ILDVNGELAAAVASVE--SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
L ++ +L A +A++ +I + LTP+ +++ + I S S L++DANL P + +
Sbjct: 99 YLAIHNQLGALLAAISDMAITESLTPERLKERLPLIQSFSTLVLDANL--PQASLEWLVE 156
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
N + + VS TK+ R+ ++ I ++ N DE A+A+ G+ P D
Sbjct: 157 HSQNQTLMVDAVSATKAVRLKRMLPKIDLLKVNRDE----ASAILGQ----PADD----- 203
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+TL A L ++G++ ++L+ G G L S++
Sbjct: 204 ----KTLSEA---LHKQGVKTILLSQGPQGASLYSQQ 233
>gi|260587499|ref|ZP_05853412.1| ribokinase [Blautia hansenii DSM 20583]
gi|260541764|gb|EEX22333.1| ribokinase [Blautia hansenii DSM 20583]
Length = 296
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN V GG N A + KLG + MI A+G D+ G +L+E+ ++ G+ GI + T
Sbjct: 22 VNLVPGGKGANQAYAVGKLGGQVDMIGAVGDDLYGRMLIENLQNVGVGISGIEIIQGTPT 81
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+D GE ++ V+ LT I + ++ I A ++++ + P +
Sbjct: 82 GNAFISVDEGGE--NSIIVVQGANNKLTTQMIDKHVNLIKRADIIIMQLEI-PLEVVEYV 138
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K A+ + + +P + ++ T+V PNE EL + I +
Sbjct: 139 KTLAQEKL-IILDPAP-AQDDLPKQFLEGFTIVKPNETELQTL------------IGKKL 184
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ E L + LLEKGI+ V++TLG DG LL +K+
Sbjct: 185 ETKEELISGAEE----LLEKGIQTVIVTLGGDGALLVTKD 220
>gi|432948041|ref|ZP_20143197.1| pyrimidine kinase [Escherichia coli KTE196]
gi|433043743|ref|ZP_20231239.1| pyrimidine kinase [Escherichia coli KTE117]
gi|431458019|gb|ELH38356.1| pyrimidine kinase [Escherichia coli KTE196]
gi|431556064|gb|ELI29899.1| pyrimidine kinase [Escherichia coli KTE117]
Length = 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|259046583|ref|ZP_05736984.1| PfkB family carbohydrate kinase [Granulicatella adiacens ATCC
49175]
gi|259036748|gb|EEW38003.1| PfkB family carbohydrate kinase [Granulicatella adiacens ATCC
49175]
Length = 317
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG M+S G D + L K + + R T+ +
Sbjct: 45 GGVARNIAENLGRLGLPVKMLSVAGDDESFTWLERETKDI-IDFSLVDRLSGKITSNYTA 103
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
ILD+ G++ A+A + SI + +TP W+ + A++++ D NL LAA ++ E
Sbjct: 104 ILDLQGDMCLALADM-SICEEMTPKWLTSHEEAVKEAALVIADLNLPQETLAALIQLTNE 162
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
IP+ PVS K +RI ++ ++ + NEDE
Sbjct: 163 GKIPLAIIPVSGPKMKRIPDKLQGVSWIVVNEDE 196
>gi|219871394|ref|YP_002475769.1| carbohydrate kinase-like protein [Haemophilus parasuis SH0165]
gi|219691598|gb|ACL32821.1| carbohydrate kinase-like protein [Haemophilus parasuis SH0165]
Length = 367
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
+GGVARNVAE + +LG K IS +G D ++ + S + + + T
Sbjct: 91 TIGGVARNVAENLGRLGQKVSFISTVGNDPEWE-RIKSFSSEFMDMNNVITVEGQSTGCY 149
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ +LD GE+ +A + SI LTP+ + + I +A ++ D N + CK A
Sbjct: 150 TALLDKEGEMYLGLADM-SIYDSLTPEALNKHAALIKNARCIVADLNCPKATIEYLCKSA 208
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+IP+ VS K R+ ++ ++ + N+ EL A + L +D +
Sbjct: 209 EGYHIPLVLIAVSEPKMDRLPQDLQGVSCLIINKGELAAYLDML--------LDTD---- 256
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
Q ++ A +LL KG++ +VLT GS +L S++
Sbjct: 257 ----QKIEEAAKILLAKGVKQIVLTAGSKAILSASQD 289
>gi|148379729|ref|YP_001254270.1| kinase, PfkB family [Clostridium botulinum A str. ATCC 3502]
gi|153933919|ref|YP_001384026.1| PfkB family kinase [Clostridium botulinum A str. ATCC 19397]
gi|153936875|ref|YP_001387568.1| PfkB family kinase [Clostridium botulinum A str. Hall]
gi|148289213|emb|CAL83308.1| probable sugar kinase [Clostridium botulinum A str. ATCC 3502]
gi|152929963|gb|ABS35463.1| kinase, PfkB family [Clostridium botulinum A str. ATCC 19397]
gi|152932789|gb|ABS38288.1| kinase, PfkB family [Clostridium botulinum A str. Hall]
Length = 319
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKMGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + ++I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSEFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K++ I ++KY + PN + A LSG + I+ K + E
Sbjct: 160 KGKTKFILDPVSAEKAKNIKPLIKYFHTIKPN----IHEAEVLSGFKI-ETIEDLKKAGE 214
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
F++L G+ V ++L ++G+ +K
Sbjct: 215 -YFESL----------GVENVFISLDAEGIYYKNK 238
>gi|366160609|ref|ZP_09460471.1| putative kinase [Escherichia sp. TW09308]
Length = 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANQDDETVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLQEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|421813081|ref|ZP_16248805.1| putative kinase [Escherichia coli 8.0416]
gi|408601387|gb|EKK75190.1| putative kinase [Escherichia coli 8.0416]
Length = 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I ++P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLNPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|268568118|ref|XP_002647951.1| Hypothetical protein CBG23859 [Caenorhabditis briggsae]
Length = 593
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN AE ++LG + ISA+G D G ++ + I R K I
Sbjct: 339 MGGVARNHAEASARLGCESIFISAIGDDQNGQFFRQNSEKID-----ITRVKTIINKPTC 393
Query: 65 NILDVN--GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
L VN + + + E + LTP+ I + + +++D+NL P ++ + +I
Sbjct: 394 TYLAVNIKKNVRYGIVTSEPLLSTLTPNLIDDNSDVLECSDFILLDSNLPVPLMSKALEI 453
Query: 123 AAECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
A + VW EP + K +++ T +V +T SPN +E + A
Sbjct: 454 AKKHEKQVWLEPTDIDKVKKVFSTGLVDAVTATSPNANEFLEWA 497
>gi|384543826|ref|YP_005727889.1| putative Sugar kinase, ribokinase family [Shigella flexneri
2002017]
gi|417723821|ref|ZP_12372626.1| hypothetical protein SFK304_2957 [Shigella flexneri K-304]
gi|417729076|ref|ZP_12377774.1| hypothetical protein SFK671_2741 [Shigella flexneri K-671]
gi|420340992|ref|ZP_14842501.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-404]
gi|281601612|gb|ADA74596.1| putative Sugar kinase, ribokinase family [Shigella flexneri
2002017]
gi|332755201|gb|EGJ85565.1| hypothetical protein SFK671_2741 [Shigella flexneri K-671]
gi|333016679|gb|EGK36008.1| hypothetical protein SFK304_2957 [Shigella flexneri K-304]
gi|391271522|gb|EIQ30396.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-404]
Length = 337
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 68 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 127
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 128 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 183
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 184 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 234
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 235 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 263
>gi|169600451|ref|XP_001793648.1| hypothetical protein SNOG_03059 [Phaeosphaeria nodorum SN15]
gi|160705442|gb|EAT89790.2| hypothetical protein SNOG_03059 [Phaeosphaeria nodorum SN15]
Length = 645
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKDID 59
+N LGGVA N+A+ +G ++ SA+G D++G L + G+ST GI+ K
Sbjct: 259 INQSLGGVAHNIAKAAHLVGGSVHLHSAVGEDLSGRAALSQLEEEGMSTAGIKTLPKPAR 318
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISS--ASVLMVDANLSPPA 115
TA + + N +L+ A+A + +E P + + H SS S+ + DAN S PA
Sbjct: 319 TAQYVAVNNANKDLSLAMADMSILETIPQPTISNLATSLFHKSSHRPSIFVADANWSSPA 378
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRI------------TSVVKYITVVSPNEDELVAM 163
L + A + FEPVS K+ RI T+ +++PN EL A+
Sbjct: 379 LHTWLQAARHPSTTTIFEPVSTAKAIRIFPPSPSTSNSTTTTPSPLADIITPNTYELAAL 438
Query: 164 ANALSGENMF 173
+ + ++F
Sbjct: 439 HDFAAQSSLF 448
>gi|157694015|ref|YP_001488477.1| ribokinase [Bacillus pumilus SAFR-032]
gi|157682773|gb|ABV63917.1| ribokinase [Bacillus pumilus SAFR-032]
Length = 292
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ YMI +G D G +L + + G+ T ++ ++++
Sbjct: 36 VPGGKGANQAVASARLGADVYMIGRVGDDTYGQDILSNLQDQGVRTSYMKPVTEMESGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TPD++R+ + I ++++ + + A C I
Sbjct: 96 HIIL---AEGDNSIVVVKGANNEVTPDYVREALSTIDDIGMVLIQQEIPEETVEAVCAIC 152
Query: 124 AECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
++ IPV P K S+++ YIT PNE E V M N S E+ R
Sbjct: 153 SKKEIPVILNPAPARKVSQQVLDQATYIT---PNEHEAVLMFNGRSIEDALR 201
>gi|153939352|ref|YP_001391024.1| PfkB family kinase [Clostridium botulinum F str. Langeland]
gi|170756368|ref|YP_001781318.1| PfkB family kinase [Clostridium botulinum B1 str. Okra]
gi|384462063|ref|YP_005674658.1| kinase, PfkB family [Clostridium botulinum F str. 230613]
gi|429244372|ref|ZP_19207832.1| kinase, PfkB family protein [Clostridium botulinum CFSAN001628]
gi|152935248|gb|ABS40746.1| kinase, PfkB family [Clostridium botulinum F str. Langeland]
gi|169121580|gb|ACA45416.1| kinase, PfkB family [Clostridium botulinum B1 str. Okra]
gi|295319080|gb|ADF99457.1| kinase, PfkB family [Clostridium botulinum F str. 230613]
gi|428758601|gb|EKX81013.1| kinase, PfkB family protein [Clostridium botulinum CFSAN001628]
Length = 319
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKIGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + ++I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSEFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K++ I ++KY + PN + A LSG + I+ K + E
Sbjct: 160 KGKTKFILDPVSAEKAKNIKPLIKYFHTIKPN----IHEAEVLSGFKI-ETIEDLKKAGE 214
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
F++L G+ V ++L ++G+ +K
Sbjct: 215 -YFESL----------GVENVFISLDAEGIYYKNK 238
>gi|417139036|ref|ZP_11982563.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0259]
gi|417308621|ref|ZP_12095465.1| putative sugar kinase yeiI [Escherichia coli PCN033]
gi|338769808|gb|EGP24584.1| putative sugar kinase yeiI [Escherichia coli PCN033]
gi|386157681|gb|EIH14021.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0259]
Length = 362
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + N + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRNDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|405880|gb|AAA60512.1| yeiI [Escherichia coli]
gi|744195|prf||2014253BF yeiI gene
Length = 344
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|386614770|ref|YP_006134436.1| sugar kinase YeiI [Escherichia coli UMNK88]
gi|419175759|ref|ZP_13719597.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7B]
gi|421775787|ref|ZP_16212395.1| kinase, PfkB family [Escherichia coli AD30]
gi|332343939|gb|AEE57273.1| sugar kinase YeiI [Escherichia coli UMNK88]
gi|378033162|gb|EHV95742.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7B]
gi|408459256|gb|EKJ83039.1| kinase, PfkB family [Escherichia coli AD30]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQHLFVYLPDESVYCSEKD 288
>gi|432392674|ref|ZP_19635504.1| pyrimidine kinase [Escherichia coli KTE21]
gi|430917830|gb|ELC38869.1| pyrimidine kinase [Escherichia coli KTE21]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I D + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IADRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|168185258|ref|ZP_02619922.1| kinase, PfkB family [Clostridium botulinum Bf]
gi|226949015|ref|YP_002804106.1| PfkB family kinase [Clostridium botulinum A2 str. Kyoto]
gi|237795181|ref|YP_002862733.1| PfkB family kinase [Clostridium botulinum Ba4 str. 657]
gi|182671687|gb|EDT83648.1| kinase, PfkB family [Clostridium botulinum Bf]
gi|226841675|gb|ACO84341.1| kinase, PfkB family [Clostridium botulinum A2 str. Kyoto]
gi|229262290|gb|ACQ53323.1| kinase, PfkB family [Clostridium botulinum Ba4 str. 657]
Length = 319
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKMGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + +I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSQFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K+++I ++KY + PN + A LSG + D K A
Sbjct: 160 KGKTKFILDPVSAEKAKKIKPLIKYFHTIKPN----IHEAEVLSGFKIETIEDLQK--AG 213
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
F++L G+ V ++L ++G+ +K
Sbjct: 214 EYFKSL----------GVENVFISLDAEGIYYKNK 238
>gi|418257121|ref|ZP_12880805.1| pfkB carbohydrate kinase family protein [Shigella flexneri 6603-63]
gi|397897274|gb|EJL13683.1| pfkB carbohydrate kinase family protein [Shigella flexneri 6603-63]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLSEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|168180344|ref|ZP_02615008.1| kinase, PfkB family [Clostridium botulinum NCTC 2916]
gi|182668809|gb|EDT80787.1| kinase, PfkB family [Clostridium botulinum NCTC 2916]
Length = 319
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKMGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + +I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSQFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K+++I ++KY + PN + A LSG + D K A
Sbjct: 160 KGKTKFILDPVSAEKAKKIKPLIKYFHTIKPN----IHEAEVLSGFKIETIEDLQK--AG 213
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
F++L G+ V ++L ++G+ +K
Sbjct: 214 EYFKSL----------GVENVFISLDAEGIYYKNK 238
>gi|432372837|ref|ZP_19615878.1| pyrimidine kinase [Escherichia coli KTE11]
gi|430895976|gb|ELC18227.1| pyrimidine kinase [Escherichia coli KTE11]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANQDDETVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLQEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQKLFVYLPDESVYCSEKD 288
>gi|159129117|gb|EDP54231.1| IdgA domain protein [Aspergillus fumigatus A1163]
Length = 768
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 137/346 (39%), Gaps = 70/346 (20%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA LGS S +G D++G L + GL T G++
Sbjct: 402 IGQSLGGVGHNVAIASHYLGSSVLFCSVVGDDLSGRAALSTLQEEGLPTAGVQILPASSG 461
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQF-------IHHISSASVLMVDAN 110
TA I D +L A+A + +E P+ + F I H V+ VDAN
Sbjct: 462 ARTAQYVAINDAKRDLVVAMADMGIME---LPEHVLDFDGFWDPLIRHTQPQWVV-VDAN 517
Query: 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSP 155
SP LA +A + V FEPVS KSRR+ S I++ +P
Sbjct: 518 WSPAVLARWIAVAKQHGARVAFEPVSTAKSRRLFSKTSEADAVIQPAKAVPNNAISLAAP 577
Query: 156 NEDELVAMANALSGENMF-------RPID---------RNK----HSAESLFQTLKPAIL 195
N+DEL AM +F R ID R++ +AE + Q + P
Sbjct: 578 NQDELSAMYTTARESGLFEESEGWWRIIDAMGMSATGSRDRLVAMTTAELVDQGI-PQQS 636
Query: 196 VLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255
+ L I ++ LG+ GVL+ R+ + PY SR S
Sbjct: 637 IQLIPFIPCIITKLGAQGVLVTQLLRPGDARLTSPDSAPYIL--------------SRAS 682
Query: 256 GAMEPAGGSQFFAVHFPALPA----SVVRLTGAGDCLVGGTLASIS 297
E GG + FP+ +V + GAGD L+G +A ++
Sbjct: 683 PTDELIGG--VYMRLFPSAGVLADREIVSVNGAGDTLLGAVVAGLA 726
>gi|160894337|ref|ZP_02075114.1| hypothetical protein CLOL250_01890 [Clostridium sp. L2-50]
gi|156864038|gb|EDO57469.1| kinase, PfkB family [Clostridium sp. L2-50]
Length = 321
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N+ +SK G K I +G DM GN L+E K AG+ T GI + T +
Sbjct: 35 GGAPVNMLTAVSKAGLKTAFIGKVGDDMHGNFLIETAKQAGIDTRGIVVDDTVFTTLAFV 94
Query: 66 ILDVNGELAAAVASVESIEKFL-----TPDWIRQF-IHHISSASVLMVDANLSP-PALAA 118
LD NGE + A + L + +R + HI S S+ A + A+
Sbjct: 95 TLDENGEREFSFARKPGADTMLCYKEVDAELLRDTKVFHIGSLSLTDEPARTTTFQAVKE 154
Query: 119 SCKIAAECNI-PVWFEPVSVTKS---RRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
+ K A + P + EP+ + R+ S++ ++ ++ +++E +
Sbjct: 155 ARKYGAVISYDPNYREPLWDNRENAMERMKSILPFVDIMKLSDEETA----------LLT 204
Query: 175 PIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
P + K +AE L T G+RLV +TLGS+GVL+CS++
Sbjct: 205 PFEDPKEAAEYLLGT-----------GVRLVAVTLGSEGVLICSRD 239
>gi|417976926|ref|ZP_12617715.1| putative kinase [Escherichia coli XH001]
gi|344193393|gb|EGV47474.1| putative kinase [Escherichia coli XH001]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRCAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|300902189|ref|ZP_07120189.1| kinase, PfkB family [Escherichia coli MS 84-1]
gi|301307348|ref|ZP_07213355.1| kinase, PfkB family [Escherichia coli MS 124-1]
gi|415863759|ref|ZP_11536963.1| kinase, PfkB family [Escherichia coli MS 85-1]
gi|417238176|ref|ZP_12035907.1| carbohydrate kinase, PfkB family [Escherichia coli 9.0111]
gi|417629404|ref|ZP_12279642.1| hypothetical protein ECSTECMHI813_2326 [Escherichia coli
STEC_MHI813]
gi|417639893|ref|ZP_12290036.1| hypothetical protein ECTX1999_2601 [Escherichia coli TX1999]
gi|419170817|ref|ZP_13714703.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7A]
gi|419181456|ref|ZP_13725070.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7C]
gi|419186902|ref|ZP_13730416.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7D]
gi|419192192|ref|ZP_13735646.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7E]
gi|420386207|ref|ZP_14885558.1| pfkB carbohydrate kinase family protein [Escherichia coli EPECa12]
gi|427805273|ref|ZP_18972340.1| putative kinase [Escherichia coli chi7122]
gi|427809832|ref|ZP_18976897.1| putative kinase [Escherichia coli]
gi|433130732|ref|ZP_20316168.1| pyrimidine kinase [Escherichia coli KTE163]
gi|443618217|ref|YP_007382073.1| kinase [Escherichia coli APEC O78]
gi|300405708|gb|EFJ89246.1| kinase, PfkB family [Escherichia coli MS 84-1]
gi|300837468|gb|EFK65228.1| kinase, PfkB family [Escherichia coli MS 124-1]
gi|315255326|gb|EFU35294.1| kinase, PfkB family [Escherichia coli MS 85-1]
gi|345373372|gb|EGX05333.1| hypothetical protein ECSTECMHI813_2326 [Escherichia coli
STEC_MHI813]
gi|345393385|gb|EGX23161.1| hypothetical protein ECTX1999_2601 [Escherichia coli TX1999]
gi|378014861|gb|EHV77758.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7A]
gi|378023704|gb|EHV86376.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7C]
gi|378028894|gb|EHV91510.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7D]
gi|378038721|gb|EHW01230.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC7E]
gi|386213954|gb|EII24379.1| carbohydrate kinase, PfkB family [Escherichia coli 9.0111]
gi|391305274|gb|EIQ63065.1| pfkB carbohydrate kinase family protein [Escherichia coli EPECa12]
gi|412963455|emb|CCK47380.1| putative kinase [Escherichia coli chi7122]
gi|412970011|emb|CCJ44654.1| putative kinase [Escherichia coli]
gi|431645965|gb|ELJ13505.1| pyrimidine kinase [Escherichia coli KTE163]
gi|443422725|gb|AGC87629.1| kinase [Escherichia coli APEC O78]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|449482069|ref|XP_002197643.2| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Taeniopygia guttata]
Length = 936
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 51/275 (18%)
Query: 22 KPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81
KP +I + +D + + S L G+ + + TA ++ GEL+ + ++
Sbjct: 571 KPVVIGGINVDF----IAKAQNSEILDMSGVLQLEGRSTATYCAVVTSAGELSVGLGDMD 626
Query: 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSR 141
I +T ++ QF ++ A ++ +D N+ + C++A E + V +EP K+
Sbjct: 627 -IHHQITEQYVFQFKENLCQAPLVCIDGNVPLSTIQYICQLAREHQLAVCYEPTDENKAS 685
Query: 142 R--ITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE--SLFQTLKPAILVL 197
+ ++ K +T +SPN EL A+ L N AE S + + A + L
Sbjct: 686 KPFLSDSWKALTYISPNLQELRAINRTLG----------NPMPAELPSRLEDVVQAAVAL 735
Query: 198 ---LEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRY 254
L + VV+TLG+ GVLLC K L S+ S Y
Sbjct: 736 ACPLLAHLHCVVVTLGAHGVLLCGKSLGGSI--------------------------SLY 769
Query: 255 SGAMEPAGGSQFFAVHFPALPAS---VVRLTGAGD 286
GA + A ++ A H+PA+P S +V ++GAGD
Sbjct: 770 PGAHQQAAAARLCAAHYPAIPISREEIVNVSGAGD 804
>gi|15802716|ref|NP_288743.1| hypothetical protein Z3417 [Escherichia coli O157:H7 str. EDL933]
gi|15832306|ref|NP_311079.1| hypothetical protein ECs3052 [Escherichia coli O157:H7 str. Sakai]
gi|168750546|ref|ZP_02775568.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4113]
gi|168757748|ref|ZP_02782755.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4401]
gi|168763822|ref|ZP_02788829.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4501]
gi|168767779|ref|ZP_02792786.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4486]
gi|168773123|ref|ZP_02798130.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4196]
gi|168780009|ref|ZP_02805016.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4076]
gi|168801145|ref|ZP_02826152.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC508]
gi|195935539|ref|ZP_03080921.1| hypothetical protein EscherichcoliO157_03622 [Escherichia coli
O157:H7 str. EC4024]
gi|208805804|ref|ZP_03248141.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4206]
gi|208813082|ref|ZP_03254411.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4045]
gi|208821607|ref|ZP_03261927.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4042]
gi|209400797|ref|YP_002271572.1| hypothetical protein ECH74115_3296 [Escherichia coli O157:H7 str.
EC4115]
gi|217327490|ref|ZP_03443573.1| kinase, pfkB family [Escherichia coli O157:H7 str. TW14588]
gi|254794059|ref|YP_003078896.1| hypothetical protein ECSP_3038 [Escherichia coli O157:H7 str.
TW14359]
gi|291283414|ref|YP_003500232.1| Kinase, pfkB family [Escherichia coli O55:H7 str. CB9615]
gi|387507550|ref|YP_006159806.1| putative kinase [Escherichia coli O55:H7 str. RM12579]
gi|387883383|ref|YP_006313685.1| hypothetical protein CDCO157_2815 [Escherichia coli Xuzhou21]
gi|416310835|ref|ZP_11656570.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
1044]
gi|416318267|ref|ZP_11660977.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
EC1212]
gi|416330504|ref|ZP_11669454.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
1125]
gi|416775396|ref|ZP_11874286.1| putative kinase [Escherichia coli O157:H7 str. G5101]
gi|416787079|ref|ZP_11879196.1| putative kinase [Escherichia coli O157:H- str. 493-89]
gi|416798695|ref|ZP_11884113.1| putative kinase [Escherichia coli O157:H- str. H 2687]
gi|416809110|ref|ZP_11888797.1| putative kinase [Escherichia coli O55:H7 str. 3256-97]
gi|416819577|ref|ZP_11893355.1| putative kinase [Escherichia coli O55:H7 str. USDA 5905]
gi|416830503|ref|ZP_11898643.1| putative kinase [Escherichia coli O157:H7 str. LSU-61]
gi|419046137|ref|ZP_13593074.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3A]
gi|419051875|ref|ZP_13598747.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3B]
gi|419057904|ref|ZP_13604710.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3C]
gi|419063374|ref|ZP_13610102.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3D]
gi|419070268|ref|ZP_13615892.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3E]
gi|419076196|ref|ZP_13621715.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3F]
gi|419081365|ref|ZP_13626813.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4A]
gi|419087137|ref|ZP_13632495.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4B]
gi|419093111|ref|ZP_13638397.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4C]
gi|419098866|ref|ZP_13644066.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4D]
gi|419104725|ref|ZP_13649854.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4E]
gi|419110181|ref|ZP_13655240.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4F]
gi|419115479|ref|ZP_13660498.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5A]
gi|419121123|ref|ZP_13666081.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5B]
gi|419126679|ref|ZP_13671565.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5C]
gi|419132175|ref|ZP_13677013.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5D]
gi|419137209|ref|ZP_13682005.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5E]
gi|420270360|ref|ZP_14772718.1| putative kinase [Escherichia coli PA22]
gi|420276179|ref|ZP_14778463.1| putative kinase [Escherichia coli PA40]
gi|420281252|ref|ZP_14783490.1| putative kinase [Escherichia coli TW06591]
gi|420287620|ref|ZP_14789811.1| putative kinase [Escherichia coli TW10246]
gi|420293116|ref|ZP_14795239.1| putative kinase [Escherichia coli TW11039]
gi|420298990|ref|ZP_14801039.1| putative kinase [Escherichia coli TW09109]
gi|420304965|ref|ZP_14806961.1| putative kinase [Escherichia coli TW10119]
gi|420310766|ref|ZP_14812699.1| putative kinase [Escherichia coli EC1738]
gi|420316025|ref|ZP_14817901.1| putative kinase [Escherichia coli EC1734]
gi|421818969|ref|ZP_16254467.1| pfkB carbohydrate kinase family protein [Escherichia coli 10.0821]
gi|421831694|ref|ZP_16266981.1| putative kinase [Escherichia coli PA7]
gi|423725754|ref|ZP_17699864.1| putative kinase [Escherichia coli PA31]
gi|424078193|ref|ZP_17815197.1| putative kinase [Escherichia coli FDA505]
gi|424084649|ref|ZP_17821159.1| putative kinase [Escherichia coli FDA517]
gi|424097707|ref|ZP_17833044.1| putative kinase [Escherichia coli FRIK1985]
gi|424103908|ref|ZP_17838707.1| putative kinase [Escherichia coli FRIK1990]
gi|424110610|ref|ZP_17844868.1| putative kinase [Escherichia coli 93-001]
gi|424116500|ref|ZP_17850364.1| putative kinase [Escherichia coli PA3]
gi|424122714|ref|ZP_17856062.1| putative kinase [Escherichia coli PA5]
gi|424128852|ref|ZP_17861776.1| putative kinase [Escherichia coli PA9]
gi|424135106|ref|ZP_17867592.1| putative kinase [Escherichia coli PA10]
gi|424141706|ref|ZP_17873619.1| putative kinase [Escherichia coli PA14]
gi|424148137|ref|ZP_17879535.1| putative kinase [Escherichia coli PA15]
gi|424154012|ref|ZP_17884988.1| putative kinase [Escherichia coli PA24]
gi|424247837|ref|ZP_17890472.1| putative kinase [Escherichia coli PA25]
gi|424324372|ref|ZP_17896393.1| putative kinase [Escherichia coli PA28]
gi|424450397|ref|ZP_17902122.1| putative kinase [Escherichia coli PA32]
gi|424456593|ref|ZP_17907755.1| putative kinase [Escherichia coli PA33]
gi|424462979|ref|ZP_17913459.1| putative kinase [Escherichia coli PA39]
gi|424475884|ref|ZP_17925227.1| putative kinase [Escherichia coli PA42]
gi|424481637|ref|ZP_17930636.1| putative kinase [Escherichia coli TW07945]
gi|424487784|ref|ZP_17936372.1| putative kinase [Escherichia coli TW09098]
gi|424501154|ref|ZP_17948078.1| putative kinase [Escherichia coli EC4203]
gi|424507387|ref|ZP_17953817.1| putative kinase [Escherichia coli EC4196]
gi|424514710|ref|ZP_17959427.1| putative kinase [Escherichia coli TW14313]
gi|424526868|ref|ZP_17970602.1| putative kinase [Escherichia coli EC4421]
gi|424533029|ref|ZP_17976394.1| putative kinase [Escherichia coli EC4422]
gi|424539095|ref|ZP_17982064.1| putative kinase [Escherichia coli EC4013]
gi|424545112|ref|ZP_17987561.1| putative kinase [Escherichia coli EC4402]
gi|424551367|ref|ZP_17993251.1| putative kinase [Escherichia coli EC4439]
gi|424557554|ref|ZP_17998991.1| putative kinase [Escherichia coli EC4436]
gi|424563900|ref|ZP_18004920.1| putative kinase [Escherichia coli EC4437]
gi|424570026|ref|ZP_18010611.1| putative kinase [Escherichia coli EC4448]
gi|424576189|ref|ZP_18016292.1| putative kinase [Escherichia coli EC1845]
gi|424582032|ref|ZP_18021701.1| putative kinase [Escherichia coli EC1863]
gi|425098752|ref|ZP_18501504.1| pfkB carbohydrate kinase family protein [Escherichia coli 3.4870]
gi|425104881|ref|ZP_18507210.1| pfkB carbohydrate kinase family protein [Escherichia coli 5.2239]
gi|425110781|ref|ZP_18512717.1| putative kinase [Escherichia coli 6.0172]
gi|425126682|ref|ZP_18527878.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.0586]
gi|425132497|ref|ZP_18533361.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.2524]
gi|425138966|ref|ZP_18539372.1| putative kinase [Escherichia coli 10.0833]
gi|425144828|ref|ZP_18544837.1| pfkB carbohydrate kinase family protein [Escherichia coli 10.0869]
gi|425150874|ref|ZP_18550508.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.0221]
gi|425156755|ref|ZP_18556036.1| putative kinase [Escherichia coli PA34]
gi|425163194|ref|ZP_18562089.1| putative kinase [Escherichia coli FDA506]
gi|425168859|ref|ZP_18567358.1| putative kinase [Escherichia coli FDA507]
gi|425174995|ref|ZP_18573125.1| putative kinase [Escherichia coli FDA504]
gi|425187288|ref|ZP_18584571.1| putative kinase [Escherichia coli FRIK1997]
gi|425194058|ref|ZP_18590841.1| putative kinase [Escherichia coli NE1487]
gi|425200493|ref|ZP_18596723.1| putative kinase [Escherichia coli NE037]
gi|425206915|ref|ZP_18602727.1| putative kinase [Escherichia coli FRIK2001]
gi|425212607|ref|ZP_18608028.1| putative kinase [Escherichia coli PA4]
gi|425218722|ref|ZP_18613713.1| putative kinase [Escherichia coli PA23]
gi|425225250|ref|ZP_18619751.1| putative kinase [Escherichia coli PA49]
gi|425231614|ref|ZP_18625663.1| putative kinase [Escherichia coli PA45]
gi|425237531|ref|ZP_18631261.1| putative kinase [Escherichia coli TT12B]
gi|425243751|ref|ZP_18637071.1| putative kinase [Escherichia coli MA6]
gi|425249872|ref|ZP_18642823.1| putative kinase [Escherichia coli 5905]
gi|425255732|ref|ZP_18648267.1| putative kinase [Escherichia coli CB7326]
gi|425261949|ref|ZP_18653979.1| putative kinase [Escherichia coli EC96038]
gi|425267986|ref|ZP_18659630.1| putative kinase [Escherichia coli 5412]
gi|425295421|ref|ZP_18685641.1| putative kinase [Escherichia coli PA38]
gi|425312092|ref|ZP_18701294.1| putative kinase [Escherichia coli EC1735]
gi|425318037|ref|ZP_18706847.1| putative kinase [Escherichia coli EC1736]
gi|425324138|ref|ZP_18712528.1| putative kinase [Escherichia coli EC1737]
gi|425330421|ref|ZP_18718310.1| putative kinase [Escherichia coli EC1846]
gi|425336585|ref|ZP_18723992.1| putative kinase [Escherichia coli EC1847]
gi|425342993|ref|ZP_18729910.1| putative kinase [Escherichia coli EC1848]
gi|425348793|ref|ZP_18735292.1| putative kinase [Escherichia coli EC1849]
gi|425355090|ref|ZP_18741180.1| putative kinase [Escherichia coli EC1850]
gi|425361050|ref|ZP_18746723.1| putative kinase [Escherichia coli EC1856]
gi|425367220|ref|ZP_18752418.1| putative kinase [Escherichia coli EC1862]
gi|425373596|ref|ZP_18758262.1| putative kinase [Escherichia coli EC1864]
gi|425386443|ref|ZP_18770023.1| putative kinase [Escherichia coli EC1866]
gi|425393165|ref|ZP_18776295.1| putative kinase [Escherichia coli EC1868]
gi|425399263|ref|ZP_18781993.1| putative kinase [Escherichia coli EC1869]
gi|425405341|ref|ZP_18787597.1| putative kinase [Escherichia coli EC1870]
gi|425411746|ref|ZP_18793537.1| putative kinase [Escherichia coli NE098]
gi|425418076|ref|ZP_18799370.1| putative kinase [Escherichia coli FRIK523]
gi|425429405|ref|ZP_18810031.1| putative kinase [Escherichia coli 0.1304]
gi|428953877|ref|ZP_19025692.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.1042]
gi|428959813|ref|ZP_19031147.1| pfkB carbohydrate kinase family protein [Escherichia coli 89.0511]
gi|428966382|ref|ZP_19037160.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.0091]
gi|428978732|ref|ZP_19048576.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.2281]
gi|428984471|ref|ZP_19053883.1| pfkB carbohydrate kinase family protein [Escherichia coli 93.0055]
gi|428990636|ref|ZP_19059643.1| pfkB carbohydrate kinase family protein [Escherichia coli 93.0056]
gi|428996436|ref|ZP_19065065.1| pfkB carbohydrate kinase family protein [Escherichia coli 94.0618]
gi|429008817|ref|ZP_19076361.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.1288]
gi|429015262|ref|ZP_19082183.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0943]
gi|429021297|ref|ZP_19087836.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0428]
gi|429027225|ref|ZP_19093258.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0427]
gi|429033433|ref|ZP_19098975.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0939]
gi|429045402|ref|ZP_19110133.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0107]
gi|429050831|ref|ZP_19115409.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0003]
gi|429056163|ref|ZP_19120515.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.1742]
gi|429061707|ref|ZP_19125746.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0007]
gi|429068015|ref|ZP_19131499.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0672]
gi|429073916|ref|ZP_19137180.1| putative kinase [Escherichia coli 99.0678]
gi|429079113|ref|ZP_19142260.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0713]
gi|429827116|ref|ZP_19358194.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0109]
gi|429833442|ref|ZP_19363840.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0010]
gi|444925702|ref|ZP_21245018.1| pfkB carbohydrate kinase family protein [Escherichia coli
09BKT078844]
gi|444931407|ref|ZP_21250464.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0814]
gi|444936816|ref|ZP_21255611.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0815]
gi|444942443|ref|ZP_21260979.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0816]
gi|444948060|ref|ZP_21266382.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0839]
gi|444953514|ref|ZP_21271625.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0848]
gi|444958986|ref|ZP_21276855.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1753]
gi|444964153|ref|ZP_21281785.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1775]
gi|444970135|ref|ZP_21287511.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1793]
gi|444975394|ref|ZP_21292540.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1805]
gi|444980868|ref|ZP_21297787.1| pfkB carbohydrate kinase family protein [Escherichia coli ATCC
700728]
gi|444986218|ref|ZP_21303011.1| pfkB carbohydrate kinase family protein [Escherichia coli PA11]
gi|444991532|ref|ZP_21308188.1| pfkB carbohydrate kinase family protein [Escherichia coli PA19]
gi|444996825|ref|ZP_21313336.1| pfkB carbohydrate kinase family protein [Escherichia coli PA13]
gi|445002381|ref|ZP_21318781.1| pfkB carbohydrate kinase family protein [Escherichia coli PA2]
gi|445007881|ref|ZP_21324134.1| pfkB carbohydrate kinase family protein [Escherichia coli PA47]
gi|445012912|ref|ZP_21329030.1| pfkB carbohydrate kinase family protein [Escherichia coli PA48]
gi|445018791|ref|ZP_21334767.1| pfkB carbohydrate kinase family protein [Escherichia coli PA8]
gi|445029573|ref|ZP_21345261.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1781]
gi|445035033|ref|ZP_21350575.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1762]
gi|445040660|ref|ZP_21356049.1| pfkB carbohydrate kinase family protein [Escherichia coli PA35]
gi|445045856|ref|ZP_21361120.1| pfkB carbohydrate kinase family protein [Escherichia coli 3.4880]
gi|445051428|ref|ZP_21366493.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0083]
gi|445057189|ref|ZP_21372059.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0670]
gi|452971366|ref|ZP_21969593.1| carbohydrate kinase [Escherichia coli O157:H7 str. EC4009]
gi|12516483|gb|AAG57298.1|AE005448_5 putative kinase [Escherichia coli O157:H7 str. EDL933]
gi|13362521|dbj|BAB36475.1| putative kinase [Escherichia coli O157:H7 str. Sakai]
gi|187771143|gb|EDU34987.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4196]
gi|188015306|gb|EDU53428.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4113]
gi|189001934|gb|EDU70920.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4076]
gi|189355331|gb|EDU73750.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4401]
gi|189363023|gb|EDU81442.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4486]
gi|189366097|gb|EDU84513.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4501]
gi|189376622|gb|EDU95038.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC508]
gi|208725605|gb|EDZ75206.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4206]
gi|208734359|gb|EDZ83046.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4045]
gi|208741730|gb|EDZ89412.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4042]
gi|209162197|gb|ACI39630.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC4115]
gi|209766148|gb|ACI81386.1| putative kinase [Escherichia coli]
gi|209766150|gb|ACI81387.1| putative kinase [Escherichia coli]
gi|209766152|gb|ACI81388.1| putative kinase [Escherichia coli]
gi|209766154|gb|ACI81389.1| putative kinase [Escherichia coli]
gi|209766156|gb|ACI81390.1| putative kinase [Escherichia coli]
gi|217319857|gb|EEC28282.1| kinase, pfkB family [Escherichia coli O157:H7 str. TW14588]
gi|254593459|gb|ACT72820.1| predicted kinase [Escherichia coli O157:H7 str. TW14359]
gi|290763287|gb|ADD57248.1| Kinase, pfkB family [Escherichia coli O55:H7 str. CB9615]
gi|320192214|gb|EFW66859.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
EC1212]
gi|320641231|gb|EFX10709.1| putative kinase [Escherichia coli O157:H7 str. G5101]
gi|320646619|gb|EFX15530.1| putative kinase [Escherichia coli O157:H- str. 493-89]
gi|320651874|gb|EFX20249.1| putative kinase [Escherichia coli O157:H- str. H 2687]
gi|320657598|gb|EFX25396.1| putative kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663204|gb|EFX30513.1| putative kinase [Escherichia coli O55:H7 str. USDA 5905]
gi|320667955|gb|EFX34858.1| putative kinase [Escherichia coli O157:H7 str. LSU-61]
gi|326339513|gb|EGD63324.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
1125]
gi|326343974|gb|EGD67735.1| Uncharacterized sugar kinase YeiI [Escherichia coli O157:H7 str.
1044]
gi|374359544|gb|AEZ41251.1| putative kinase [Escherichia coli O55:H7 str. RM12579]
gi|377892967|gb|EHU57406.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3A]
gi|377893560|gb|EHU57994.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3B]
gi|377905174|gb|EHU69448.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3C]
gi|377909849|gb|EHU74047.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3D]
gi|377912478|gb|EHU76637.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3E]
gi|377921553|gb|EHU85549.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC3F]
gi|377925995|gb|EHU89930.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4A]
gi|377930665|gb|EHU94545.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4B]
gi|377942250|gb|EHV05985.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4C]
gi|377942719|gb|EHV06452.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4D]
gi|377947208|gb|EHV10875.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4E]
gi|377957459|gb|EHV20991.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC4F]
gi|377961274|gb|EHV24748.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5A]
gi|377967064|gb|EHV30471.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5B]
gi|377975144|gb|EHV38466.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5C]
gi|377975742|gb|EHV39059.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5D]
gi|377984202|gb|EHV47437.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC5E]
gi|386796841|gb|AFJ29875.1| hypothetical protein CDCO157_2815 [Escherichia coli Xuzhou21]
gi|390643130|gb|EIN22493.1| putative kinase [Escherichia coli FDA517]
gi|390644159|gb|EIN23452.1| putative kinase [Escherichia coli FDA505]
gi|390660825|gb|EIN38515.1| putative kinase [Escherichia coli 93-001]
gi|390662400|gb|EIN40004.1| putative kinase [Escherichia coli FRIK1985]
gi|390664130|gb|EIN41592.1| putative kinase [Escherichia coli FRIK1990]
gi|390677932|gb|EIN53932.1| putative kinase [Escherichia coli PA3]
gi|390681144|gb|EIN56948.1| putative kinase [Escherichia coli PA5]
gi|390683832|gb|EIN59484.1| putative kinase [Escherichia coli PA9]
gi|390697054|gb|EIN71488.1| putative kinase [Escherichia coli PA10]
gi|390701102|gb|EIN75357.1| putative kinase [Escherichia coli PA15]
gi|390701807|gb|EIN76025.1| putative kinase [Escherichia coli PA14]
gi|390713872|gb|EIN86786.1| putative kinase [Escherichia coli PA22]
gi|390723109|gb|EIN95729.1| putative kinase [Escherichia coli PA25]
gi|390724692|gb|EIN97241.1| putative kinase [Escherichia coli PA24]
gi|390727828|gb|EIO00211.1| putative kinase [Escherichia coli PA28]
gi|390743088|gb|EIO14075.1| putative kinase [Escherichia coli PA31]
gi|390743348|gb|EIO14325.1| putative kinase [Escherichia coli PA32]
gi|390745846|gb|EIO16626.1| putative kinase [Escherichia coli PA33]
gi|390757589|gb|EIO27059.1| putative kinase [Escherichia coli PA40]
gi|390769153|gb|EIO38105.1| putative kinase [Escherichia coli PA39]
gi|390769535|gb|EIO38462.1| putative kinase [Escherichia coli PA42]
gi|390781539|gb|EIO49216.1| putative kinase [Escherichia coli TW06591]
gi|390790377|gb|EIO57805.1| putative kinase [Escherichia coli TW10246]
gi|390791373|gb|EIO58764.1| putative kinase [Escherichia coli TW07945]
gi|390797202|gb|EIO64458.1| putative kinase [Escherichia coli TW11039]
gi|390806509|gb|EIO73412.1| putative kinase [Escherichia coli TW09098]
gi|390806685|gb|EIO73587.1| putative kinase [Escherichia coli TW09109]
gi|390815987|gb|EIO82499.1| putative kinase [Escherichia coli TW10119]
gi|390826257|gb|EIO92113.1| putative kinase [Escherichia coli EC4203]
gi|390831587|gb|EIO96955.1| putative kinase [Escherichia coli EC4196]
gi|390847442|gb|EIP10984.1| putative kinase [Escherichia coli TW14313]
gi|390850829|gb|EIP14170.1| putative kinase [Escherichia coli EC4421]
gi|390861635|gb|EIP23879.1| putative kinase [Escherichia coli EC4422]
gi|390865838|gb|EIP27832.1| putative kinase [Escherichia coli EC4013]
gi|390871187|gb|EIP32629.1| putative kinase [Escherichia coli EC4402]
gi|390878937|gb|EIP39747.1| putative kinase [Escherichia coli EC4439]
gi|390883919|gb|EIP44308.1| putative kinase [Escherichia coli EC4436]
gi|390893926|gb|EIP53460.1| putative kinase [Escherichia coli EC4437]
gi|390896189|gb|EIP55580.1| putative kinase [Escherichia coli EC4448]
gi|390900045|gb|EIP59281.1| putative kinase [Escherichia coli EC1738]
gi|390908015|gb|EIP66856.1| putative kinase [Escherichia coli EC1734]
gi|390919537|gb|EIP77886.1| putative kinase [Escherichia coli EC1863]
gi|390920506|gb|EIP78774.1| putative kinase [Escherichia coli EC1845]
gi|408064066|gb|EKG98548.1| putative kinase [Escherichia coli PA7]
gi|408071139|gb|EKH05492.1| putative kinase [Escherichia coli PA34]
gi|408078782|gb|EKH12910.1| putative kinase [Escherichia coli FDA506]
gi|408083091|gb|EKH17009.1| putative kinase [Escherichia coli FDA507]
gi|408091353|gb|EKH24584.1| putative kinase [Escherichia coli FDA504]
gi|408104170|gb|EKH36492.1| putative kinase [Escherichia coli FRIK1997]
gi|408108399|gb|EKH40402.1| putative kinase [Escherichia coli NE1487]
gi|408115266|gb|EKH46732.1| putative kinase [Escherichia coli NE037]
gi|408121232|gb|EKH52193.1| putative kinase [Escherichia coli FRIK2001]
gi|408127714|gb|EKH58151.1| putative kinase [Escherichia coli PA4]
gi|408138743|gb|EKH68399.1| putative kinase [Escherichia coli PA23]
gi|408140398|gb|EKH69914.1| putative kinase [Escherichia coli PA49]
gi|408146015|gb|EKH75158.1| putative kinase [Escherichia coli PA45]
gi|408155372|gb|EKH83695.1| putative kinase [Escherichia coli TT12B]
gi|408160030|gb|EKH88074.1| putative kinase [Escherichia coli MA6]
gi|408164039|gb|EKH91879.1| putative kinase [Escherichia coli 5905]
gi|408173505|gb|EKI00525.1| putative kinase [Escherichia coli CB7326]
gi|408180616|gb|EKI07221.1| putative kinase [Escherichia coli EC96038]
gi|408183047|gb|EKI09521.1| putative kinase [Escherichia coli 5412]
gi|408217979|gb|EKI42213.1| putative kinase [Escherichia coli PA38]
gi|408227726|gb|EKI51308.1| putative kinase [Escherichia coli EC1735]
gi|408238673|gb|EKI61459.1| putative kinase [Escherichia coli EC1736]
gi|408243107|gb|EKI65651.1| putative kinase [Escherichia coli EC1737]
gi|408247483|gb|EKI69683.1| putative kinase [Escherichia coli EC1846]
gi|408256566|gb|EKI77941.1| putative kinase [Escherichia coli EC1847]
gi|408259268|gb|EKI80455.1| putative kinase [Escherichia coli EC1848]
gi|408265660|gb|EKI86342.1| putative kinase [Escherichia coli EC1849]
gi|408275029|gb|EKI95011.1| putative kinase [Escherichia coli EC1850]
gi|408277246|gb|EKI97056.1| putative kinase [Escherichia coli EC1856]
gi|408287080|gb|EKJ05976.1| putative kinase [Escherichia coli EC1862]
gi|408291249|gb|EKJ09883.1| putative kinase [Escherichia coli EC1864]
gi|408308359|gb|EKJ25629.1| putative kinase [Escherichia coli EC1868]
gi|408308450|gb|EKJ25719.1| putative kinase [Escherichia coli EC1866]
gi|408319458|gb|EKJ35594.1| putative kinase [Escherichia coli EC1869]
gi|408326193|gb|EKJ42017.1| putative kinase [Escherichia coli EC1870]
gi|408326792|gb|EKJ42561.1| putative kinase [Escherichia coli NE098]
gi|408336901|gb|EKJ51649.1| putative kinase [Escherichia coli FRIK523]
gi|408346658|gb|EKJ60944.1| putative kinase [Escherichia coli 0.1304]
gi|408550180|gb|EKK27525.1| pfkB carbohydrate kinase family protein [Escherichia coli 5.2239]
gi|408550793|gb|EKK28109.1| pfkB carbohydrate kinase family protein [Escherichia coli 3.4870]
gi|408551350|gb|EKK28631.1| putative kinase [Escherichia coli 6.0172]
gi|408570207|gb|EKK46187.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.0586]
gi|408579864|gb|EKK55312.1| putative kinase [Escherichia coli 10.0833]
gi|408581502|gb|EKK56837.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.2524]
gi|408591549|gb|EKK65970.1| pfkB carbohydrate kinase family protein [Escherichia coli 10.0869]
gi|408596597|gb|EKK70722.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.0221]
gi|408612726|gb|EKK86060.1| pfkB carbohydrate kinase family protein [Escherichia coli 10.0821]
gi|427205026|gb|EKV75286.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.1042]
gi|427207402|gb|EKV77571.1| pfkB carbohydrate kinase family protein [Escherichia coli 89.0511]
gi|427222199|gb|EKV90991.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.0091]
gi|427224706|gb|EKV93405.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.2281]
gi|427242264|gb|EKW09679.1| pfkB carbohydrate kinase family protein [Escherichia coli 93.0056]
gi|427242773|gb|EKW10170.1| pfkB carbohydrate kinase family protein [Escherichia coli 93.0055]
gi|427246417|gb|EKW13631.1| pfkB carbohydrate kinase family protein [Escherichia coli 94.0618]
gi|427262238|gb|EKW28139.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0943]
gi|427264995|gb|EKW30622.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.1288]
gi|427276859|gb|EKW41424.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0428]
gi|427279628|gb|EKW44039.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0427]
gi|427283395|gb|EKW47603.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0939]
gi|427299494|gb|EKW62465.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0107]
gi|427300757|gb|EKW63682.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0003]
gi|427313565|gb|EKW75666.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.1742]
gi|427315993|gb|EKW77967.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0007]
gi|427319705|gb|EKW81508.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0672]
gi|427328522|gb|EKW89884.1| putative kinase [Escherichia coli 99.0678]
gi|427329443|gb|EKW90769.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0713]
gi|429254190|gb|EKY38630.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0109]
gi|429255914|gb|EKY40195.1| pfkB carbohydrate kinase family protein [Escherichia coli 97.0010]
gi|444538644|gb|ELV18491.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0814]
gi|444540134|gb|ELV19833.1| pfkB carbohydrate kinase family protein [Escherichia coli
09BKT078844]
gi|444547794|gb|ELV26351.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0815]
gi|444557640|gb|ELV34966.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0839]
gi|444558856|gb|ELV36117.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0816]
gi|444563828|gb|ELV40804.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0848]
gi|444573505|gb|ELV49870.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1753]
gi|444577969|gb|ELV54062.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1775]
gi|444579688|gb|ELV55665.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1793]
gi|444593663|gb|ELV68870.1| pfkB carbohydrate kinase family protein [Escherichia coli ATCC
700728]
gi|444593923|gb|ELV69127.1| pfkB carbohydrate kinase family protein [Escherichia coli PA11]
gi|444596171|gb|ELV71254.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1805]
gi|444607381|gb|ELV81959.1| pfkB carbohydrate kinase family protein [Escherichia coli PA13]
gi|444607686|gb|ELV82254.1| pfkB carbohydrate kinase family protein [Escherichia coli PA19]
gi|444616240|gb|ELV90408.1| pfkB carbohydrate kinase family protein [Escherichia coli PA2]
gi|444624145|gb|ELV98050.1| pfkB carbohydrate kinase family protein [Escherichia coli PA47]
gi|444624554|gb|ELV98436.1| pfkB carbohydrate kinase family protein [Escherichia coli PA48]
gi|444630187|gb|ELW03852.1| pfkB carbohydrate kinase family protein [Escherichia coli PA8]
gi|444641908|gb|ELW15124.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1781]
gi|444645537|gb|ELW18599.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.1762]
gi|444654735|gb|ELW27382.1| pfkB carbohydrate kinase family protein [Escherichia coli PA35]
gi|444660153|gb|ELW32526.1| pfkB carbohydrate kinase family protein [Escherichia coli 3.4880]
gi|444665155|gb|ELW37298.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0083]
gi|444669938|gb|ELW41872.1| pfkB carbohydrate kinase family protein [Escherichia coli 99.0670]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|300926265|ref|ZP_07142068.1| kinase, PfkB family [Escherichia coli MS 182-1]
gi|301328642|ref|ZP_07221703.1| kinase, PfkB family [Escherichia coli MS 78-1]
gi|307311261|ref|ZP_07590905.1| PfkB domain protein [Escherichia coli W]
gi|378712389|ref|YP_005277282.1| PfkB domain-containing protein [Escherichia coli KO11FL]
gi|386609552|ref|YP_006125038.1| kinase [Escherichia coli W]
gi|386700854|ref|YP_006164691.1| putative kinase [Escherichia coli KO11FL]
gi|386710034|ref|YP_006173755.1| putative kinase [Escherichia coli W]
gi|422956466|ref|ZP_16968940.1| hypothetical protein ESQG_00435 [Escherichia coli H494]
gi|433135394|ref|ZP_20320739.1| pyrimidine kinase [Escherichia coli KTE166]
gi|450218509|ref|ZP_21895883.1| kinase [Escherichia coli O08]
gi|300417694|gb|EFK01005.1| kinase, PfkB family [Escherichia coli MS 182-1]
gi|300845034|gb|EFK72794.1| kinase, PfkB family [Escherichia coli MS 78-1]
gi|306908767|gb|EFN39264.1| PfkB domain protein [Escherichia coli W]
gi|315061469|gb|ADT75796.1| predicted kinase [Escherichia coli W]
gi|323377950|gb|ADX50218.1| PfkB domain protein [Escherichia coli KO11FL]
gi|371600001|gb|EHN88779.1| hypothetical protein ESQG_00435 [Escherichia coli H494]
gi|383392381|gb|AFH17339.1| putative kinase [Escherichia coli KO11FL]
gi|383405726|gb|AFH11969.1| putative kinase [Escherichia coli W]
gi|431656381|gb|ELJ23367.1| pyrimidine kinase [Escherichia coli KTE166]
gi|449317569|gb|EMD07654.1| kinase [Escherichia coli O08]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|302334993|ref|YP_003800200.1| transcriptional regulator, MarR family [Olsenella uli DSM 7084]
gi|301318833|gb|ADK67320.1| transcriptional regulator, MarR family [Olsenella uli DSM 7084]
Length = 366
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG RN+A ++ LG ++SA G D +L +SAG+ T+
Sbjct: 96 GGAGRNIAHNLALLGQDVRLVSAFGTDERAALLTGACRSAGIDISSSLTVSGGTTSTYLF 155
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D G+++ AVA + ++ LTP ++ + + + A V ++DANL +A+ ++
Sbjct: 156 VADRRGDMSVAVADMRIFDE-LTPAFLERHLDALDRADVCVIDANL---PVASIRYLSEH 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
P++ +PVS K+ ++ V+ + + PN E A L+G ++ DR
Sbjct: 212 VRAPLFCDPVSTAKAEKLGGVLGRLHTLKPNRLE----AEVLTGVHIS---DRT------ 258
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+L A+ LL G+ V ++LGS+GVL
Sbjct: 259 ---SLDRAVDRLLGTGLERVFVSLGSEGVL 285
>gi|116625710|ref|YP_827866.1| ribokinase-like domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116228872|gb|ABJ87581.1| PfkB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 299
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNVAE +S+LG + M+S +G D G ++ H S G+ T + TA +
Sbjct: 35 FGGVARNVAENLSRLGREVLMVSRVGDDETGRAVVSHLNSLGIDTSPVTISTR-PTASYT 93
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ NGEL +A ++ I +TP+ + + + + +DANLS + +++A
Sbjct: 94 AILEPNGELVLGLADMD-IYDEITPELLEPCLPRLLECELWFIDANLSAATIEWISRVSA 152
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMF 173
+ + VSV KSR++ ++ ++ + N +A A +L G + F
Sbjct: 153 HLALAA--DAVSVVKSRKLAGILDTVSPLFLN----IAQAASLLGVDAF 195
>gi|261419579|ref|YP_003253261.1| PfkB domain-containing protein [Geobacillus sp. Y412MC61]
gi|319766395|ref|YP_004131896.1| PfkB domain-containing protein [Geobacillus sp. Y412MC52]
gi|261376036|gb|ACX78779.1| PfkB domain protein [Geobacillus sp. Y412MC61]
gi|317111261|gb|ADU93753.1| PfkB domain protein [Geobacillus sp. Y412MC52]
Length = 313
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 28/218 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +L ++S +G D G L++ S ++T I R +T +
Sbjct: 40 GGVARNIAENLGRLAQPVSLVSTVGDDRDGQWLVDV-TSRYVNTSFIVRTPKANTGTYTA 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+A + +I + +W++Q + S +++D N P A+ S + A+
Sbjct: 99 VLDERGEMVLALADM-AIYDTVGEEWLKQQWTRLGPISAVVLDTNF-PKAVIRS--VIAQ 154
Query: 126 C---NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
C +IP+ VSV K +R+ S + +T NE E + R+ H+
Sbjct: 155 CRQEDIPLCVVTVSVPKVKRLPSDLSGVTWFVTNEAEAKEF------------VGRDGHT 202
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +KP +L+ G + VV+T G++GV +K+
Sbjct: 203 DD----IMKP----ILQAGAQNVVVTRGANGVAYATKQ 232
>gi|16130098|ref|NP_416665.1| predicted kinase [Escherichia coli str. K-12 substr. MG1655]
gi|170081782|ref|YP_001731102.1| hypothetical protein ECDH10B_2317 [Escherichia coli str. K-12
substr. DH10B]
gi|238901342|ref|YP_002927138.1| hypothetical protein BWG_1942 [Escherichia coli BW2952]
gi|300955814|ref|ZP_07168155.1| kinase, PfkB family [Escherichia coli MS 175-1]
gi|301024346|ref|ZP_07188035.1| kinase, PfkB family [Escherichia coli MS 196-1]
gi|301644182|ref|ZP_07244190.1| kinase, PfkB family [Escherichia coli MS 146-1]
gi|331642785|ref|ZP_08343920.1| putative kinase [Escherichia coli H736]
gi|386595057|ref|YP_006091457.1| PfkB domain-containing protein [Escherichia coli DH1]
gi|387612737|ref|YP_006115853.1| putative pyrimidine kinase [Escherichia coli ETEC H10407]
gi|387621870|ref|YP_006129497.1| hypothetical protein ECDH1ME8569_2096 [Escherichia coli DH1]
gi|388478209|ref|YP_490399.1| kinase [Escherichia coli str. K-12 substr. W3110]
gi|415778198|ref|ZP_11489244.1| uncharacterized sugar kinase yeiI [Escherichia coli 3431]
gi|417259931|ref|ZP_12047454.1| carbohydrate kinase, PfkB family [Escherichia coli 2.3916]
gi|417276662|ref|ZP_12063989.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2303]
gi|417291762|ref|ZP_12079043.1| carbohydrate kinase, PfkB family [Escherichia coli B41]
gi|417618755|ref|ZP_12269169.1| hypothetical protein ECG581_2561 [Escherichia coli G58-1]
gi|417635088|ref|ZP_12285301.1| hypothetical protein ECSTECS1191_3008 [Escherichia coli STEC_S1191]
gi|417944631|ref|ZP_12587872.1| putative kinase [Escherichia coli XH140A]
gi|418303530|ref|ZP_12915324.1| uncharacterized sugar kinase yeiI [Escherichia coli UMNF18]
gi|418957479|ref|ZP_13509403.1| kinase, PfkB family [Escherichia coli J53]
gi|419143089|ref|ZP_13687829.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6A]
gi|419149259|ref|ZP_13693912.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6B]
gi|419154542|ref|ZP_13699105.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6C]
gi|419159832|ref|ZP_13704337.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6D]
gi|419164958|ref|ZP_13709415.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6E]
gi|419809272|ref|ZP_14334158.1| putative kinase [Escherichia coli O32:H37 str. P4]
gi|419938812|ref|ZP_14455623.1| hypothetical protein EC75_06109 [Escherichia coli 75]
gi|422766769|ref|ZP_16820496.1| pfkB family protein carbohydrate kinase [Escherichia coli E1520]
gi|422771991|ref|ZP_16825680.1| pfkB family protein carbohydrate kinase [Escherichia coli E482]
gi|422819663|ref|ZP_16867874.1| hypothetical protein ESMG_04186 [Escherichia coli M919]
gi|423704457|ref|ZP_17678882.1| hypothetical protein ESSG_03858 [Escherichia coli H730]
gi|425273328|ref|ZP_18664740.1| putative kinase [Escherichia coli TW15901]
gi|425283870|ref|ZP_18674909.1| putative kinase [Escherichia coli TW00353]
gi|425289166|ref|ZP_18680014.1| putative kinase [Escherichia coli 3006]
gi|432534433|ref|ZP_19771409.1| pyrimidine kinase [Escherichia coli KTE234]
gi|432564413|ref|ZP_19800996.1| pyrimidine kinase [Escherichia coli KTE51]
gi|432576438|ref|ZP_19812899.1| pyrimidine kinase [Escherichia coli KTE56]
gi|432627811|ref|ZP_19863788.1| pyrimidine kinase [Escherichia coli KTE77]
gi|432637406|ref|ZP_19873277.1| pyrimidine kinase [Escherichia coli KTE81]
gi|432661393|ref|ZP_19897039.1| pyrimidine kinase [Escherichia coli KTE111]
gi|432704950|ref|ZP_19940052.1| pyrimidine kinase [Escherichia coli KTE171]
gi|432737674|ref|ZP_19972433.1| pyrimidine kinase [Escherichia coli KTE42]
gi|432875687|ref|ZP_20093960.1| pyrimidine kinase [Escherichia coli KTE154]
gi|432955618|ref|ZP_20147558.1| pyrimidine kinase [Escherichia coli KTE197]
gi|433048538|ref|ZP_20235892.1| pyrimidine kinase [Escherichia coli KTE120]
gi|450245584|ref|ZP_21900655.1| kinase [Escherichia coli S17]
gi|2507177|sp|P33020.2|YEII_ECOLI RecName: Full=Uncharacterized sugar kinase YeiI
gi|1788484|gb|AAC75221.1| putative kinase [Escherichia coli str. K-12 substr. MG1655]
gi|85675274|dbj|BAE76637.1| predicted kinase [Escherichia coli str. K12 substr. W3110]
gi|169889617|gb|ACB03324.1| predicted kinase [Escherichia coli str. K-12 substr. DH10B]
gi|238862605|gb|ACR64603.1| predicted kinase [Escherichia coli BW2952]
gi|260448746|gb|ACX39168.1| PfkB domain protein [Escherichia coli DH1]
gi|299880443|gb|EFI88654.1| kinase, PfkB family [Escherichia coli MS 196-1]
gi|300317281|gb|EFJ67065.1| kinase, PfkB family [Escherichia coli MS 175-1]
gi|301077480|gb|EFK92286.1| kinase, PfkB family [Escherichia coli MS 146-1]
gi|309702473|emb|CBJ01799.1| putative pyrimidine kinase [Escherichia coli ETEC H10407]
gi|315136793|dbj|BAJ43952.1| hypothetical protein ECDH1ME8569_2096 [Escherichia coli DH1]
gi|315615401|gb|EFU96033.1| uncharacterized sugar kinase yeiI [Escherichia coli 3431]
gi|323936774|gb|EGB33059.1| pfkB family protein carbohydrate kinase [Escherichia coli E1520]
gi|323940770|gb|EGB36958.1| pfkB family protein carbohydrate kinase [Escherichia coli E482]
gi|331039583|gb|EGI11803.1| putative kinase [Escherichia coli H736]
gi|339415628|gb|AEJ57300.1| uncharacterized sugar kinase yeiI [Escherichia coli UMNF18]
gi|342363675|gb|EGU27781.1| putative kinase [Escherichia coli XH140A]
gi|345375469|gb|EGX07416.1| hypothetical protein ECG581_2561 [Escherichia coli G58-1]
gi|345387371|gb|EGX17193.1| hypothetical protein ECSTECS1191_3008 [Escherichia coli STEC_S1191]
gi|359332507|dbj|BAL38954.1| predicted kinase [Escherichia coli str. K-12 substr. MDS42]
gi|377992381|gb|EHV55528.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6B]
gi|377994372|gb|EHV57499.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6A]
gi|377997124|gb|EHV60231.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6C]
gi|378007176|gb|EHV70145.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6D]
gi|378011040|gb|EHV73985.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC6E]
gi|384380126|gb|EIE37993.1| kinase, PfkB family [Escherichia coli J53]
gi|385158202|gb|EIF20192.1| putative kinase [Escherichia coli O32:H37 str. P4]
gi|385536765|gb|EIF83651.1| hypothetical protein ESMG_04186 [Escherichia coli M919]
gi|385706374|gb|EIG43415.1| hypothetical protein ESSG_03858 [Escherichia coli H730]
gi|386226654|gb|EII48956.1| carbohydrate kinase, PfkB family [Escherichia coli 2.3916]
gi|386240597|gb|EII77520.1| carbohydrate kinase, PfkB family [Escherichia coli 3.2303]
gi|386254084|gb|EIJ03774.1| carbohydrate kinase, PfkB family [Escherichia coli B41]
gi|388409347|gb|EIL69643.1| hypothetical protein EC75_06109 [Escherichia coli 75]
gi|408193110|gb|EKI18663.1| putative kinase [Escherichia coli TW15901]
gi|408201560|gb|EKI26709.1| putative kinase [Escherichia coli TW00353]
gi|408213718|gb|EKI38197.1| putative kinase [Escherichia coli 3006]
gi|431060660|gb|ELD69986.1| pyrimidine kinase [Escherichia coli KTE234]
gi|431093341|gb|ELD99007.1| pyrimidine kinase [Escherichia coli KTE51]
gi|431115357|gb|ELE18881.1| pyrimidine kinase [Escherichia coli KTE56]
gi|431163180|gb|ELE63616.1| pyrimidine kinase [Escherichia coli KTE77]
gi|431171301|gb|ELE71480.1| pyrimidine kinase [Escherichia coli KTE81]
gi|431200509|gb|ELE99235.1| pyrimidine kinase [Escherichia coli KTE111]
gi|431243179|gb|ELF37568.1| pyrimidine kinase [Escherichia coli KTE171]
gi|431282567|gb|ELF73447.1| pyrimidine kinase [Escherichia coli KTE42]
gi|431420633|gb|ELH02917.1| pyrimidine kinase [Escherichia coli KTE154]
gi|431468289|gb|ELH48295.1| pyrimidine kinase [Escherichia coli KTE197]
gi|431564681|gb|ELI37850.1| pyrimidine kinase [Escherichia coli KTE120]
gi|449320206|gb|EMD10242.1| kinase [Escherichia coli S17]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|393199349|ref|YP_006461191.1| sugar kinase [Solibacillus silvestris StLB046]
gi|327438680|dbj|BAK15045.1| sugar kinase [Solibacillus silvestris StLB046]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG++ +I+ +G D + ++ KS ++ + + + D +T +
Sbjct: 92 VGGVARNIAENLGRLGNRVSLITVMGEDHDSAFIEQNCKSM-MNVDLVEKLNDYNTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD GEL ++A++ +I L P +++ + +AS +++D N + A
Sbjct: 151 AVLDNMGELVISMANM-AIYDQLLPSILKKHEAILQNASCIVIDLNSPLETVEYIRNFAI 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E NI + PVS K + ++ + I N DE + N E
Sbjct: 210 ERNIALAVIPVSSPKMKNMSQDLHGIRYFICNRDEAESYLNV---------------KLE 254
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ Q K A+ +LL+KG VVLTLG GV++ ++
Sbjct: 255 TYSQYEK-AVNMLLQKGAEHVVLTLGEHGVMVGNE 288
>gi|157161642|ref|YP_001458960.1| hypothetical protein EcHS_A2296 [Escherichia coli HS]
gi|170019523|ref|YP_001724477.1| hypothetical protein EcolC_1488 [Escherichia coli ATCC 8739]
gi|187730451|ref|YP_001879509.1| hypothetical protein SbBS512_E0806 [Shigella boydii CDC 3083-94]
gi|194436114|ref|ZP_03068216.1| kinase, pfkB family [Escherichia coli 101-1]
gi|251785527|ref|YP_002999831.1| kinase [Escherichia coli BL21(DE3)]
gi|253772914|ref|YP_003035745.1| hypothetical protein ECBD_1498 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162174|ref|YP_003045282.1| hypothetical protein ECB_02089 [Escherichia coli B str. REL606]
gi|254288935|ref|YP_003054683.1| kinase [Escherichia coli BL21(DE3)]
gi|297517959|ref|ZP_06936345.1| hypothetical protein EcolOP_10007 [Escherichia coli OP50]
gi|300918804|ref|ZP_07135373.1| kinase, PfkB family [Escherichia coli MS 115-1]
gi|300930393|ref|ZP_07145802.1| kinase, PfkB family [Escherichia coli MS 187-1]
gi|312973591|ref|ZP_07787763.1| uncharacterized sugar kinase yeiI [Escherichia coli 1827-70]
gi|416269005|ref|ZP_11642321.1| Uncharacterized sugar kinase YeiI [Shigella dysenteriae CDC
74-1112]
gi|417122321|ref|ZP_11971579.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0246]
gi|417231615|ref|ZP_12033013.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0959]
gi|417608790|ref|ZP_12259293.1| hypothetical protein ECSTECDG1313_3190 [Escherichia coli
STEC_DG131-3]
gi|419922166|ref|ZP_14440188.1| hypothetical protein EC54115_04530 [Escherichia coli 541-15]
gi|420379215|ref|ZP_14878703.1| pfkB carbohydrate kinase family protein [Shigella dysenteriae
225-75]
gi|422790586|ref|ZP_16843290.1| pfkB family protein carbohydrate kinase [Escherichia coli TA007]
gi|425305887|ref|ZP_18695598.1| putative kinase [Escherichia coli N1]
gi|432485967|ref|ZP_19727883.1| pyrimidine kinase [Escherichia coli KTE212]
gi|432671232|ref|ZP_19906762.1| pyrimidine kinase [Escherichia coli KTE119]
gi|432968270|ref|ZP_20157185.1| pyrimidine kinase [Escherichia coli KTE203]
gi|433174082|ref|ZP_20358608.1| pyrimidine kinase [Escherichia coli KTE232]
gi|442592240|ref|ZP_21010220.1| Uncharacterized sugar kinase YeiI [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442600289|ref|ZP_21017975.1| Uncharacterized sugar kinase YeiI [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|157067322|gb|ABV06577.1| kinase, pfkB family [Escherichia coli HS]
gi|169754451|gb|ACA77150.1| PfkB domain protein [Escherichia coli ATCC 8739]
gi|187427443|gb|ACD06717.1| kinase, pfkB family [Shigella boydii CDC 3083-94]
gi|194424842|gb|EDX40827.1| kinase, pfkB family [Escherichia coli 101-1]
gi|242377800|emb|CAQ32565.1| predicted kinase [Escherichia coli BL21(DE3)]
gi|253323958|gb|ACT28560.1| PfkB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974075|gb|ACT39746.1| predicted kinase [Escherichia coli B str. REL606]
gi|253978242|gb|ACT43912.1| predicted kinase [Escherichia coli BL21(DE3)]
gi|300414047|gb|EFJ97357.1| kinase, PfkB family [Escherichia coli MS 115-1]
gi|300461715|gb|EFK25208.1| kinase, PfkB family [Escherichia coli MS 187-1]
gi|310332186|gb|EFP99421.1| uncharacterized sugar kinase yeiI [Escherichia coli 1827-70]
gi|320174911|gb|EFW50029.1| Uncharacterized sugar kinase YeiI [Shigella dysenteriae CDC
74-1112]
gi|323972958|gb|EGB68155.1| pfkB family protein carbohydrate kinase [Escherichia coli TA007]
gi|345357999|gb|EGW90187.1| hypothetical protein ECSTECDG1313_3190 [Escherichia coli
STEC_DG131-3]
gi|386147601|gb|EIG94041.1| carbohydrate kinase, PfkB family [Escherichia coli 97.0246]
gi|386204614|gb|EII09125.1| carbohydrate kinase, PfkB family [Escherichia coli 5.0959]
gi|388396742|gb|EIL57816.1| hypothetical protein EC54115_04530 [Escherichia coli 541-15]
gi|391305369|gb|EIQ63155.1| pfkB carbohydrate kinase family protein [Shigella dysenteriae
225-75]
gi|408228512|gb|EKI52046.1| putative kinase [Escherichia coli N1]
gi|431016364|gb|ELD29911.1| pyrimidine kinase [Escherichia coli KTE212]
gi|431210547|gb|ELF08602.1| pyrimidine kinase [Escherichia coli KTE119]
gi|431471387|gb|ELH51280.1| pyrimidine kinase [Escherichia coli KTE203]
gi|431692170|gb|ELJ57609.1| pyrimidine kinase [Escherichia coli KTE232]
gi|441608393|emb|CCP99246.1| Uncharacterized sugar kinase YeiI [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441650851|emb|CCQ04230.1| Uncharacterized sugar kinase YeiI [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|422786780|ref|ZP_16839519.1| pfkB family protein carbohydrate kinase [Escherichia coli H489]
gi|323961624|gb|EGB57230.1| pfkB family protein carbohydrate kinase [Escherichia coli H489]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|82544622|ref|YP_408569.1| hypothetical protein SBO_2167 [Shigella boydii Sb227]
gi|416301165|ref|ZP_11652897.1| Uncharacterized sugar kinase YeiI [Shigella flexneri CDC 796-83]
gi|417682677|ref|ZP_12332030.1| hypothetical protein SB359474_2515 [Shigella boydii 3594-74]
gi|420326223|ref|ZP_14827975.1| pfkB carbohydrate kinase family protein [Shigella flexneri CCH060]
gi|420351648|ref|ZP_14852832.1| pfkB carbohydrate kinase family protein [Shigella boydii 4444-74]
gi|81246033|gb|ABB66741.1| putative kinase [Shigella boydii Sb227]
gi|320184405|gb|EFW59214.1| Uncharacterized sugar kinase YeiI [Shigella flexneri CDC 796-83]
gi|332093361|gb|EGI98419.1| hypothetical protein SB359474_2515 [Shigella boydii 3594-74]
gi|391250726|gb|EIQ09946.1| pfkB carbohydrate kinase family protein [Shigella flexneri CCH060]
gi|391287375|gb|EIQ45905.1| pfkB carbohydrate kinase family protein [Shigella boydii 4444-74]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|425422978|ref|ZP_18804146.1| putative kinase [Escherichia coli 0.1288]
gi|408343533|gb|EKJ57927.1| putative kinase [Escherichia coli 0.1288]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|419370665|ref|ZP_13911784.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14A]
gi|378217259|gb|EHX77538.1| pfkB carbohydrate kinase family protein [Escherichia coli DEC14A]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|420336806|ref|ZP_14838379.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-315]
gi|391261624|gb|EIQ20670.1| pfkB carbohydrate kinase family protein [Shigella flexneri K-315]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|424521033|ref|ZP_17965176.1| putative kinase [Escherichia coli TW14301]
gi|429039532|ref|ZP_19104665.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0932]
gi|445024298|ref|ZP_21340133.1| pfkB carbohydrate kinase family protein [Escherichia coli 7.1982]
gi|390846300|gb|EIP09904.1| putative kinase [Escherichia coli TW14301]
gi|427292157|gb|EKW55513.1| pfkB carbohydrate kinase family protein [Escherichia coli 96.0932]
gi|444639002|gb|ELW12323.1| pfkB carbohydrate kinase family protein [Escherichia coli 7.1982]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNA-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|421683213|ref|ZP_16123009.1| pfkB carbohydrate kinase family protein [Shigella flexneri 1485-80]
gi|404339067|gb|EJZ65507.1| pfkB carbohydrate kinase family protein [Shigella flexneri 1485-80]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|417713191|ref|ZP_12362158.1| hypothetical protein SFK272_2925 [Shigella flexneri K-272]
gi|417718029|ref|ZP_12366930.1| hypothetical protein SFK227_2763 [Shigella flexneri K-227]
gi|333002882|gb|EGK22438.1| hypothetical protein SFK272_2925 [Shigella flexneri K-272]
gi|333016884|gb|EGK36208.1| hypothetical protein SFK227_2763 [Shigella flexneri K-227]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|421838793|ref|ZP_16272549.1| PfkB family kinase, partial [Clostridium botulinum CFSAN001627]
gi|409737203|gb|EKN38435.1| PfkB family kinase, partial [Clostridium botulinum CFSAN001627]
Length = 209
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +S++G IS LG D +LEH + G K T
Sbjct: 43 FGGVCRNIAENLSRVGINTKFISILGEDENAKCMLEHSRKMGYDMGDSLILKGGTTPTYM 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE+ +AVA ++SI + + ++I I A ++D++ +P L K
Sbjct: 103 AILDENGEMVSAVADMKSIGE-MNSEFIDSKADIIKKAEYTVLDSD-NPEILEYILK-KF 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG 169
+ +PVS K+++I ++KY + PN + A LSG
Sbjct: 160 KGKTKFILDPVSAEKAKKIKPLIKYFHTIKPN----IHEAEVLSG 200
>gi|422972141|ref|ZP_16975193.1| hypothetical protein ESRG_01827 [Escherichia coli TA124]
gi|371598022|gb|EHN86837.1| hypothetical protein ESRG_01827 [Escherichia coli TA124]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432851451|ref|ZP_20081836.1| pyrimidine kinase [Escherichia coli KTE144]
gi|431399789|gb|ELG83179.1| pyrimidine kinase [Escherichia coli KTE144]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGARDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|417828546|ref|ZP_12475099.1| pfkB carbohydrate kinase family protein [Shigella flexneri J1713]
gi|335574922|gb|EGM61234.1| pfkB carbohydrate kinase family protein [Shigella flexneri J1713]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|301021069|ref|ZP_07185112.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|419920682|ref|ZP_14438793.1| hypothetical protein ECKD2_21547 [Escherichia coli KD2]
gi|432543772|ref|ZP_19780615.1| pyrimidine kinase [Escherichia coli KTE236]
gi|432549262|ref|ZP_19786030.1| pyrimidine kinase [Escherichia coli KTE237]
gi|432622411|ref|ZP_19858442.1| pyrimidine kinase [Escherichia coli KTE76]
gi|300398321|gb|EFJ81859.1| kinase, PfkB family [Escherichia coli MS 69-1]
gi|388384309|gb|EIL46043.1| hypothetical protein ECKD2_21547 [Escherichia coli KD2]
gi|431074182|gb|ELD81746.1| pyrimidine kinase [Escherichia coli KTE236]
gi|431079540|gb|ELD86494.1| pyrimidine kinase [Escherichia coli KTE237]
gi|431159211|gb|ELE59768.1| pyrimidine kinase [Escherichia coli KTE76]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|422834075|ref|ZP_16882139.1| hypothetical protein ESOG_01740 [Escherichia coli E101]
gi|371603502|gb|EHN92157.1| hypothetical protein ESOG_01740 [Escherichia coli E101]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|24113547|ref|NP_708057.1| kinase [Shigella flexneri 2a str. 301]
gi|30063601|ref|NP_837772.1| hypothetical protein S2374 [Shigella flexneri 2a str. 2457T]
gi|110806136|ref|YP_689656.1| hypothetical protein SFV_2235 [Shigella flexneri 5 str. 8401]
gi|415853292|ref|ZP_11529301.1| uncharacterized sugar kinase yeiI [Shigella flexneri 2a str. 2457T]
gi|417703224|ref|ZP_12352335.1| hypothetical protein SFK218_3138 [Shigella flexneri K-218]
gi|417734257|ref|ZP_12382908.1| hypothetical protein SF274771_2662 [Shigella flexneri 2747-71]
gi|417738985|ref|ZP_12387565.1| hypothetical protein SF434370_2322 [Shigella flexneri 4343-70]
gi|417744028|ref|ZP_12392554.1| pfkB carbohydrate kinase family protein [Shigella flexneri 2930-71]
gi|424838541|ref|ZP_18263178.1| hypothetical protein SF5M90T_2178 [Shigella flexneri 5a str. M90T]
gi|24052594|gb|AAN43764.1| putative kinase [Shigella flexneri 2a str. 301]
gi|30041854|gb|AAP17581.1| putative kinase [Shigella flexneri 2a str. 2457T]
gi|110615684|gb|ABF04351.1| putative kinase [Shigella flexneri 5 str. 8401]
gi|313651269|gb|EFS15667.1| uncharacterized sugar kinase yeiI [Shigella flexneri 2a str. 2457T]
gi|332754796|gb|EGJ85161.1| hypothetical protein SF434370_2322 [Shigella flexneri 4343-70]
gi|332756331|gb|EGJ86682.1| hypothetical protein SF274771_2662 [Shigella flexneri 2747-71]
gi|332765969|gb|EGJ96179.1| pfkB carbohydrate kinase family protein [Shigella flexneri 2930-71]
gi|333002084|gb|EGK21650.1| hypothetical protein SFK218_3138 [Shigella flexneri K-218]
gi|383467593|gb|EID62614.1| hypothetical protein SF5M90T_2178 [Shigella flexneri 5a str. M90T]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432719283|ref|ZP_19954252.1| pyrimidine kinase [Escherichia coli KTE9]
gi|431263095|gb|ELF55084.1| pyrimidine kinase [Escherichia coli KTE9]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|422334381|ref|ZP_16415388.1| hypothetical protein HMPREF0986_03882 [Escherichia coli 4_1_47FAA]
gi|373244607|gb|EHP64088.1| hypothetical protein HMPREF0986_03882 [Escherichia coli 4_1_47FAA]
Length = 362
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|417270922|ref|ZP_12058271.1| carbohydrate kinase, PfkB family [Escherichia coli 2.4168]
gi|425115570|ref|ZP_18517372.1| putative kinase [Escherichia coli 8.0566]
gi|425120298|ref|ZP_18521997.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.0569]
gi|386234622|gb|EII66598.1| carbohydrate kinase, PfkB family [Escherichia coli 2.4168]
gi|408568250|gb|EKK44283.1| putative kinase [Escherichia coli 8.0566]
gi|408569261|gb|EKK45261.1| pfkB carbohydrate kinase family protein [Escherichia coli 8.0569]
Length = 362
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQHLFVYLPDESVYCSEKD 288
>gi|416286623|ref|ZP_11648522.1| Uncharacterized sugar kinase YeiI [Shigella boydii ATCC 9905]
gi|420346063|ref|ZP_14847488.1| pfkB carbohydrate kinase family protein [Shigella boydii 965-58]
gi|320178888|gb|EFW53851.1| Uncharacterized sugar kinase YeiI [Shigella boydii ATCC 9905]
gi|391274783|gb|EIQ33583.1| pfkB carbohydrate kinase family protein [Shigella boydii 965-58]
Length = 362
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432962329|ref|ZP_20151982.1| pyrimidine kinase [Escherichia coli KTE202]
gi|433063623|ref|ZP_20250546.1| pyrimidine kinase [Escherichia coli KTE125]
gi|431474120|gb|ELH53942.1| pyrimidine kinase [Escherichia coli KTE202]
gi|431581617|gb|ELI54064.1| pyrimidine kinase [Escherichia coli KTE125]
Length = 362
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|419950466|ref|ZP_14466679.1| hypothetical protein ECMT8_13892 [Escherichia coli CUMT8]
gi|388416790|gb|EIL76666.1| hypothetical protein ECMT8_13892 [Escherichia coli CUMT8]
Length = 362
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + +S K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTISEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|386281231|ref|ZP_10058893.1| hypothetical protein ESBG_00461 [Escherichia sp. 4_1_40B]
gi|432692133|ref|ZP_19927362.1| pyrimidine kinase [Escherichia coli KTE161]
gi|386121370|gb|EIG69985.1| hypothetical protein ESBG_00461 [Escherichia sp. 4_1_40B]
gi|431226927|gb|ELF24077.1| pyrimidine kinase [Escherichia coli KTE161]
Length = 362
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLVHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|194431461|ref|ZP_03063753.1| kinase, pfkB family [Shigella dysenteriae 1012]
gi|417671591|ref|ZP_12321080.1| hypothetical protein SD15574_1217 [Shigella dysenteriae 155-74]
gi|194420286|gb|EDX36363.1| kinase, pfkB family [Shigella dysenteriae 1012]
gi|332096217|gb|EGJ01220.1| hypothetical protein SD15574_1217 [Shigella dysenteriae 155-74]
Length = 362
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + + + A+ +E+ LTP + + A V++ D NL+ AL +A E
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLCHAGVVLADCNLTAEALEWVFTLADE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 212 --IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN------ 259
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|194220858|ref|XP_001502121.2| PREDICTED: ribokinase-like [Equus caballus]
Length = 324
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 53 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGAAS 112
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + V L + +R+ + IS A V++ ++P + +A
Sbjct: 113 IIVDNEGQ--NIIVIVAGANLLLNTEDLREAANAISRAKVMICQLEVTPATSLEALTMAH 170
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + P D K
Sbjct: 171 SNGVKTLFNPAPAIADLDPRFYTLSD---VFCCNETE----AEILTGLTVGSPADAGK-- 221
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVL+E+G ++V++TLG+DG ++ S+ L I K K
Sbjct: 222 ----------AALVLVERGCQVVIITLGADGCVMLSQTQLVPKHIPTEKVK 262
>gi|432602721|ref|ZP_19838965.1| pyrimidine kinase [Escherichia coli KTE66]
gi|431141295|gb|ELE43060.1| pyrimidine kinase [Escherichia coli KTE66]
Length = 362
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + ++ A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQIVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|251779251|ref|ZP_04822171.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083566|gb|EES49456.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKL S M+S +G D+ G ++++K G++T+ + +K+ + V
Sbjct: 37 GGKGANQAVAASKLKSDVMMVSKVGDDLFGKNTIKNFKDNGINTDFVTIEKNQASGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D N + ++ V+ K L+P I + + S++++ ++ + + A +
Sbjct: 97 FVDKNSK--NSILIVKGANKSLSPKDIDEASEELKKCSLIVLQLEINLETVYYAIDFANK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P + V K ++PNE EL + N +P+ S
Sbjct: 155 NNIPVLLNPAPAISDLNLNYVCK-CDFLAPNESELEILTN--------KPV--------S 197
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+ +K A + +KG++ V++T+GS GVL
Sbjct: 198 TVEEIKEAARYIHDKGVKNVIVTMGSKGVL 227
>gi|386624855|ref|YP_006144583.1| putative kinase [Escherichia coli O7:K1 str. CE10]
gi|349738592|gb|AEQ13298.1| putative kinase [Escherichia coli O7:K1 str. CE10]
Length = 362
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I ++P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLNPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++GI+ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGIQQLFVYLPDESVYCSEKD 288
>gi|187779773|ref|ZP_02996246.1| hypothetical protein CLOSPO_03369 [Clostridium sporogenes ATCC
15579]
gi|187773398|gb|EDU37200.1| ribokinase [Clostridium sporogenes ATCC 15579]
Length = 303
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L S M+S +G D+ G ++++KS G++T+ + QK+ + V
Sbjct: 37 GGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKSNGVNTDFVTVQKNQASGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K L+P I + S++++ + + + A +
Sbjct: 97 FVD--RESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P TK V K V PNE EL + N +P+D
Sbjct: 155 NNIPVLLNPAPATKEIDFDYVYKCDFFV-PNETELEILTN--------KPVDT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +K A + +KG++ V++T+GS G+L +K+
Sbjct: 199 -IEDIKEAAHFIGDKGVKNVIVTMGSKGLLWINKD 232
>gi|420373507|ref|ZP_14873604.1| hypothetical protein SF123566_3609 [Shigella flexneri 1235-66]
gi|391317183|gb|EIQ74534.1| hypothetical protein SF123566_3609 [Shigella flexneri 1235-66]
Length = 293
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|403412325|emb|CCL99025.1| predicted protein [Fibroporia radiculosa]
Length = 800
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 150/354 (42%), Gaps = 77/354 (21%)
Query: 1 VNYVLGGVARNVAECMSK-LGSKP-------YMISALGLDMAGNILLEHWKSAGLSTEGI 52
V+ LGGVARNVAE + L S+P ++S +G D G +L++ + G+ T+G
Sbjct: 418 VSLSLGGVARNVAEAAHRILSSRPTAELGTALLVSPIGRDSFGRLLVDETRRIGMRTDGF 477
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDA 109
+ +A+ + ++D +G L VA V ++E +R HH V+ +D
Sbjct: 478 IQMDAARSAICNMVMDGHGGLTGGVADMGIVHTLEGNTALSALRG--HH---PRVVALDG 532
Query: 110 NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-----------ITVVSPNED 158
NLS L + + V++EP SV KS RI + ++ +PN
Sbjct: 533 NLSQETLKSLLNYCIDNKTTVFYEPTSVPKSIRIFPAIAAALPRLRSSDAPVSFAAPNLL 592
Query: 159 ELVAM-ANALSGENMFRPIDRNKH----------SAESLFQ---------------TLKP 192
EL M A SG P++ H + S F+ + K
Sbjct: 593 ELARMYEEARSG-----PLELTAHRHWWDIVDDMAIGSQFRMGLDQLARVNVDDQDSSKG 647
Query: 193 AILVLLEKGIRLV---VLTLGSDGVLLCSKE-LLSSMRIGLRKTKPYGFSRDLYKTVTSR 248
+ L+EKGI + +L ++ C + ++++ R+ + + ++ + V R
Sbjct: 648 TLSFLVEKGIAQMAIHLLPFFQHLIIKCGERGVIAAFRVSSEHGQSSPWLQE-HSNVRGR 706
Query: 249 ---CHSSRYSGAMEPAGGSQFFAVHFPALP---ASVVRLTGAGDCLVGGTLASI 296
C GA HFPALP ++V +TGAGD LVG L+S+
Sbjct: 707 YIVCRGKSSVGAT--------VLKHFPALPIPKENIVNVTGAGDSLVGSILSSL 752
>gi|218700631|ref|YP_002408260.1| hypothetical protein ECIAI39_2300 [Escherichia coli IAI39]
gi|218370617|emb|CAR18426.1| putative kinase [Escherichia coli IAI39]
Length = 362
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++GI+ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGIQQLFVYLPDESVYCSEKD 288
>gi|218705691|ref|YP_002413210.1| hypothetical protein ECUMN_2496 [Escherichia coli UMN026]
gi|293405628|ref|ZP_06649620.1| hypothetical protein ECGG_00980 [Escherichia coli FVEC1412]
gi|298381310|ref|ZP_06990909.1| hypothetical protein ECFG_01039 [Escherichia coli FVEC1302]
gi|300897781|ref|ZP_07116174.1| kinase, PfkB family [Escherichia coli MS 198-1]
gi|417587154|ref|ZP_12237925.1| hypothetical protein ECSTECC16502_2791 [Escherichia coli
STEC_C165-02]
gi|419932802|ref|ZP_14450086.1| hypothetical protein EC5761_04435 [Escherichia coli 576-1]
gi|432354100|ref|ZP_19597373.1| pyrimidine kinase [Escherichia coli KTE2]
gi|432402452|ref|ZP_19645204.1| pyrimidine kinase [Escherichia coli KTE26]
gi|432426716|ref|ZP_19669217.1| pyrimidine kinase [Escherichia coli KTE181]
gi|432461182|ref|ZP_19703331.1| pyrimidine kinase [Escherichia coli KTE204]
gi|432476389|ref|ZP_19718388.1| pyrimidine kinase [Escherichia coli KTE208]
gi|432518231|ref|ZP_19755419.1| pyrimidine kinase [Escherichia coli KTE228]
gi|432538352|ref|ZP_19775254.1| pyrimidine kinase [Escherichia coli KTE235]
gi|432631947|ref|ZP_19867873.1| pyrimidine kinase [Escherichia coli KTE80]
gi|432641661|ref|ZP_19877495.1| pyrimidine kinase [Escherichia coli KTE83]
gi|432666556|ref|ZP_19902137.1| pyrimidine kinase [Escherichia coli KTE116]
gi|432775245|ref|ZP_20009524.1| pyrimidine kinase [Escherichia coli KTE54]
gi|432887142|ref|ZP_20101216.1| pyrimidine kinase [Escherichia coli KTE158]
gi|432913340|ref|ZP_20119037.1| pyrimidine kinase [Escherichia coli KTE190]
gi|433019229|ref|ZP_20207450.1| pyrimidine kinase [Escherichia coli KTE105]
gi|433053769|ref|ZP_20240949.1| pyrimidine kinase [Escherichia coli KTE122]
gi|433068474|ref|ZP_20255264.1| pyrimidine kinase [Escherichia coli KTE128]
gi|433159203|ref|ZP_20344041.1| pyrimidine kinase [Escherichia coli KTE177]
gi|433179016|ref|ZP_20363416.1| pyrimidine kinase [Escherichia coli KTE82]
gi|218432788|emb|CAR13682.1| putative kinase [Escherichia coli UMN026]
gi|291427836|gb|EFF00863.1| hypothetical protein ECGG_00980 [Escherichia coli FVEC1412]
gi|298278752|gb|EFI20266.1| hypothetical protein ECFG_01039 [Escherichia coli FVEC1302]
gi|300358496|gb|EFJ74366.1| kinase, PfkB family [Escherichia coli MS 198-1]
gi|345336782|gb|EGW69216.1| hypothetical protein ECSTECC16502_2791 [Escherichia coli
STEC_C165-02]
gi|388415585|gb|EIL75508.1| hypothetical protein EC5761_04435 [Escherichia coli 576-1]
gi|430875273|gb|ELB98815.1| pyrimidine kinase [Escherichia coli KTE2]
gi|430924923|gb|ELC45596.1| pyrimidine kinase [Escherichia coli KTE26]
gi|430955648|gb|ELC74430.1| pyrimidine kinase [Escherichia coli KTE181]
gi|430988872|gb|ELD05341.1| pyrimidine kinase [Escherichia coli KTE204]
gi|431005557|gb|ELD20578.1| pyrimidine kinase [Escherichia coli KTE208]
gi|431050853|gb|ELD60529.1| pyrimidine kinase [Escherichia coli KTE228]
gi|431069241|gb|ELD77570.1| pyrimidine kinase [Escherichia coli KTE235]
gi|431170147|gb|ELE70341.1| pyrimidine kinase [Escherichia coli KTE80]
gi|431181544|gb|ELE81406.1| pyrimidine kinase [Escherichia coli KTE83]
gi|431200850|gb|ELE99568.1| pyrimidine kinase [Escherichia coli KTE116]
gi|431318284|gb|ELG06050.1| pyrimidine kinase [Escherichia coli KTE54]
gi|431416140|gb|ELG98627.1| pyrimidine kinase [Escherichia coli KTE158]
gi|431439640|gb|ELH20973.1| pyrimidine kinase [Escherichia coli KTE190]
gi|431531130|gb|ELI07799.1| pyrimidine kinase [Escherichia coli KTE105]
gi|431570169|gb|ELI43095.1| pyrimidine kinase [Escherichia coli KTE122]
gi|431584101|gb|ELI56088.1| pyrimidine kinase [Escherichia coli KTE128]
gi|431677842|gb|ELJ43855.1| pyrimidine kinase [Escherichia coli KTE177]
gi|431701381|gb|ELJ66300.1| pyrimidine kinase [Escherichia coli KTE82]
Length = 362
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+N GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T
Sbjct: 88 INCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQST 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALA 117
+ I + + + A+ +++ LTP + R + H A V++ D NL+ AL
Sbjct: 148 STYLAIANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALE 203
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPID 177
+A E IPV+ + VS K+ +I + +I + P EL L G+ + D
Sbjct: 204 WVFTLADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDAD 257
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
RN A+ L ++G++ + + L + V K+
Sbjct: 258 RN------------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|256847655|ref|ZP_05553100.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
gi|256715344|gb|EEU30320.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
Length = 316
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A S+LGS MIS +G DM G L+H+K +G+ G+ K +
Sbjct: 38 FGGKGANQAYAASQLGSNVAMISKVGSDMLGREYLKHFKESGIDVAGVSVGKKSNGVAPC 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I G + + + V+ LTPD + + I ++ ++++ +S + ++A
Sbjct: 98 FI---QGNMNSIII-VQGANSELTPDVLEDYRDIIKNSKLIVLQQEISLETDYRAIEMAH 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E +PV P I V SPNE EL G PID
Sbjct: 154 EYGVPVMLNPAPANDHIDIQHVA-MCEFYSPNETEL--------GRLTKMPIDT------ 198
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRI 227
+K A L++ G++ V++T+GS G L SK EL+ S ++
Sbjct: 199 --IDQIKAAAHKLVDLGVKNVIVTIGSRGALWVSKDHEELIPSYKV 242
>gi|432793375|ref|ZP_20027459.1| pyrimidine kinase [Escherichia coli KTE78]
gi|432799333|ref|ZP_20033355.1| pyrimidine kinase [Escherichia coli KTE79]
gi|431339038|gb|ELG26100.1| pyrimidine kinase [Escherichia coli KTE78]
gi|431343199|gb|ELG30163.1| pyrimidine kinase [Escherichia coli KTE79]
Length = 362
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + ++ A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQIVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V CS++
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESV-YCSEK 287
>gi|300950079|ref|ZP_07164026.1| kinase, PfkB family [Escherichia coli MS 116-1]
gi|300450569|gb|EFK14189.1| kinase, PfkB family [Escherichia coli MS 116-1]
Length = 362
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G ++LE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMILEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|452981551|gb|EME81311.1| hypothetical protein MYCFIDRAFT_204263 [Pseudocercospora fijiensis
CIRAD86]
Length = 822
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 130/339 (38%), Gaps = 71/339 (20%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID---TA 61
LGGV NVA LG+K + SA+ D+ G LE A +ST GI+ TA
Sbjct: 467 LGGVGHNVARAAHLLGAKVRLCSAVADDLTGKSALEALTFAEMSTAGIKTLPTTSGHRTA 526
Query: 62 VVSNILDVNGELAAAVA--------SVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
I D + L A+A S E EKF P H ++ S L+VD N
Sbjct: 527 QYIAINDKSKNLVLAMADMSILEKVSTEIFEKFWRPQL------HATNPSHLVVDGNWGS 580
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKSRRITSVV-----------KYITVVSPNEDELVA 162
L S +++ V FEPVS KS IT + I + +PN ELV+
Sbjct: 581 EYL--SLWLSSTTKTFVSFEPVSAPKS--ITPFLLPPNTLSVFPNPSIHLTTPNTHELVS 636
Query: 163 MANALSGENMFRPIDRNK------------HSAESLFQTLK------PAILVLLEKGIRL 204
M A +F D K S SL T K P + + L I
Sbjct: 637 MHTAARKNALFTRPDWWKILDSFGIPSSGARSQLSLLTTPKLVDEGIPQMCIQLLPFIPC 696
Query: 205 VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGS 264
++ LGS+GVLL R+G + PY SR+ + E GS
Sbjct: 697 ILTKLGSEGVLLTQIIPSGDPRLGDGEYAPYILSRNQNQN--------------EDQEGS 742
Query: 265 QFFAVHFPALPA-------SVVRLTGAGDCLVGGTLASI 296
V+ PA VV + G GD +G LA +
Sbjct: 743 AVGGVYMRLFPAIEKVRDEEVVSVNGVGDTFLGTLLAGM 781
>gi|82777339|ref|YP_403688.1| hypothetical protein SDY_2106 [Shigella dysenteriae Sd197]
gi|309788083|ref|ZP_07682689.1| uncharacterized sugar kinase yeiI [Shigella dysenteriae 1617]
gi|81241487|gb|ABB62197.1| putative kinase [Shigella dysenteriae Sd197]
gi|308923935|gb|EFP69436.1| uncharacterized sugar kinase yeiI [Shigella dysenteriae 1617]
Length = 362
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + +S K+ +I + +I + P EL + G+ + DRN
Sbjct: 209 ADE--IPVFVDTISEFKAGKIKHWLAHIHTLKPTLPEL----EIVWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|116248845|ref|YP_764686.1| PfkB family kinase [Rhizobium leguminosarum bv. viciae 3841]
gi|115253495|emb|CAK11887.1| putative PfkB family kinase [Rhizobium leguminosarum bv. viciae
3841]
Length = 387
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVARNVAE ++ LG+ +S +G D G +L+H + G+ + + TA +
Sbjct: 112 LGGVARNVAENLALLGTSTSFVSIVGDDEGGRAILKHMRDRGIDVSQVVTTSERPTAEYA 171
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD GEL +A + I L P+ I + H+++AS + D N PPA + IA
Sbjct: 172 AILDPQGELVLGIADM-GIFDLLLPNHIERIWPHLAAASWVFSDCN--PPAEMLAALIAK 228
Query: 125 E---CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+ + VS K+ R+ + I ++ N DE
Sbjct: 229 RQGGARFKLAIDAVSTPKAARLPKNLTGIDLLFMNIDE 266
>gi|432771123|ref|ZP_20005462.1| pyrimidine kinase [Escherichia coli KTE50]
gi|431314820|gb|ELG02752.1| pyrimidine kinase [Escherichia coli KTE50]
Length = 362
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E +PV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--LPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNTLHQQGVQQLFVYLPDESVYCSEKD 288
>gi|331084153|ref|ZP_08333259.1| ribokinase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402008|gb|EGG81581.1| ribokinase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VN V GG N A + KLG + MI A+G D+ G +L+E+ ++ G+ GI + T
Sbjct: 33 VNLVPGGKGANQAYAVGKLGGQVDMIGAVGDDLYGRMLIENLQNVGVGISGIEIIQGTPT 92
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+D GE ++ V+ LT I + + I A ++++ + P +
Sbjct: 93 GNAFISVDEGGE--NSIIVVQGANNKLTTQMIDKHVDLIKRADIIIMQLEI-PLEVVEYV 149
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K A+ + + +P + ++ T+V PNE EL + I +
Sbjct: 150 KTLAQEKL-IILDPAP-AQDDLPKQFLEGFTIVKPNETELQTL------------IGKKL 195
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ E L + LLEKGI+ V++TLG DG LL K+
Sbjct: 196 ETKEELISGAEE----LLEKGIQTVIVTLGGDGALLVMKD 231
>gi|227515240|ref|ZP_03945289.1| possible ribokinase [Lactobacillus fermentum ATCC 14931]
gi|227086396|gb|EEI21708.1| possible ribokinase [Lactobacillus fermentum ATCC 14931]
Length = 315
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++LGS MIS +G D G LEH++ +G+ G+ +
Sbjct: 38 FGGKGANQAYAAAQLGSSVAMISKVGSDSLGQAYLEHFQQSGIDITGVSVGNQSNGVAPC 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I G + + + V+ LTPD + Q+ I S+ ++++ +S + +A
Sbjct: 98 FI---QGNMNSIIV-VQGANSELTPDVLDQYTDLIKSSKMVILQQEISLATDYRAIDLAE 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ ++PV P + + + K SPNE EL G P+ E
Sbjct: 154 QFHVPVMLNPAPANDNVDLEHITK-CEFYSPNETEL--------GRLTHLPV-------E 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL-LCS--KELLSSMRI 227
S+ Q +K A L+++G++ V++T+GS G L +C+ +EL+ S ++
Sbjct: 198 SIDQ-IKDAAHSLVDQGVKNVIVTIGSRGALWVCADHEELIPSYKV 242
>gi|184156218|ref|YP_001844558.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|260662448|ref|ZP_05863343.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|385812775|ref|YP_005849166.1| ribokinase [Lactobacillus fermentum CECT 5716]
gi|183227562|dbj|BAG28078.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|260553139|gb|EEX26082.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|299783672|gb|ADJ41670.1| Ribokinase [Lactobacillus fermentum CECT 5716]
Length = 315
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++LGS MIS +G D G LEH++ +G+ G+ +
Sbjct: 38 FGGKGANQAYAAAQLGSSVAMISKVGSDSLGQAYLEHFQQSGIDITGVSVGNQSNGVAPC 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I G + + + V+ LTPD + Q+ I S+ ++++ +S + +A
Sbjct: 98 FI---QGNMNSIIV-VQGANSELTPDVLDQYTDLIKSSKMVILQQEISLATDYRAIDLAE 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ ++PV P + + + K SPNE EL G P+ E
Sbjct: 154 QFHVPVMLNPAPANDNVDLEHITK-CEFYSPNETEL--------GRLTHLPV-------E 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL-LCS--KELLSSMRI 227
S+ Q +K A L+++G++ V++T+GS G L +C+ +EL+ S ++
Sbjct: 198 SIDQ-IKDAAHSLVDQGVKNVIVTIGSRGALWVCADHEELIPSYKV 242
>gi|330917216|ref|XP_003297722.1| hypothetical protein PTT_08230 [Pyrenophora teres f. teres 0-1]
gi|311329430|gb|EFQ94181.1| hypothetical protein PTT_08230 [Pyrenophora teres f. teres 0-1]
Length = 804
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 141/343 (41%), Gaps = 45/343 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID- 59
+ LGGVA N+A+ LGS + SA+G D++G + + G+S GI
Sbjct: 443 ITQTLGGVAHNIAKASHLLGSSVRLHSAVGDDLSGRAAIAQLQEEGMSVSGIETLPGPSR 502
Query: 60 TAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISS--ASVLMVDANLSPP 114
TA I + N +LA A+A +E+I +T ++ +S V + DAN S
Sbjct: 503 TAQYVAINNTNKDLALAMADMSILETIPDKMTSHLATLIFNNSTSPCPKVFVADANWSSS 562
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI---TSVVK---------YITVVSPNEDELVA 162
AL + A + N FEPVS K+ RI TS + +PN EL A
Sbjct: 563 ALHIWLQSACQKNTTTIFEPVSTAKALRIFPPTSTTNPSPSVYPHPLAHITTPNIHELTA 622
Query: 163 MANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRL-VVLTLGSD----GVLLC 217
+ +N+F + S F + L + G+R+ + LT+GSD G+
Sbjct: 623 LYTYAEEKNIF-------STTPSWFTIID--ALGIPTTGLRVPLALTVGSDIVDRGIPQQ 673
Query: 218 SKELLSSMRIGLRKTKPYG--------FSRDLYKTVTSRCH--SSRYSGAMEPAGGS--- 264
+ +LL L K P G F+ + T R + +G +E G
Sbjct: 674 AIKLLPFFPTILTKLGPEGVLMTRLLPFNDPALQDDTERQFVLARNMNGDVESGVGGLYV 733
Query: 265 QFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307
+ F V P V+ + G GD G ++S G + VA
Sbjct: 734 RLFPVEKVLQPEEVISVNGIGDTFCGALAHALSQGRRIQDVVA 776
>gi|395230562|ref|ZP_10408866.1| hypothetical protein WYG_3524 [Citrobacter sp. A1]
gi|421846532|ref|ZP_16279679.1| kinase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424731377|ref|ZP_18159961.1| pseudouridine kinase [Citrobacter sp. L17]
gi|394715947|gb|EJF21732.1| hypothetical protein WYG_3524 [Citrobacter sp. A1]
gi|411772126|gb|EKS55764.1| kinase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422894028|gb|EKU33843.1| pseudouridine kinase [Citrobacter sp. L17]
gi|455644526|gb|EMF23626.1| kinase [Citrobacter freundii GTC 09479]
Length = 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVSSCIRLHGHNTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + E A+ +++ LTP + R I H + V++ D NL+ A+ I
Sbjct: 153 IANQQEETVLAINDTHILQQ-LTPQLLNGSRDLIRH---SGVVLADCNLTAEAIEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A + IPV+ + VS K+ ++ + I + P + EL L G+ + DR +
Sbjct: 209 ADD--IPVFIDTVSEFKAEKMKTWFTRIHTLKPTQKELA----ILWGQPIHTDADRVL-A 261
Query: 183 AESLFQTLKPAILVLLE 199
SL Q I V LE
Sbjct: 262 VNSLHQQGVKRIFVCLE 278
>gi|153940649|ref|YP_001390909.1| ribokinase [Clostridium botulinum F str. Langeland]
gi|384461953|ref|YP_005674548.1| ribokinase [Clostridium botulinum F str. 230613]
gi|152936545|gb|ABS42043.1| ribokinase [Clostridium botulinum F str. Langeland]
gi|295318970|gb|ADF99347.1| ribokinase [Clostridium botulinum F str. 230613]
Length = 303
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L S M+S +G D+ G ++++K+ G++T+ + QK+ + V
Sbjct: 37 GGKGANQAITAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGVNTDFVTVQKNQASGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K L+P I + S++++ + + S A +
Sbjct: 97 FVD--KESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYSIDFANK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P TK V K V PNE EL + N +P++
Sbjct: 155 NNIPVLLNPAPATKELDFNYVYKCDFFV-PNETELEILTN--------KPVNT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +K A + +KG++ V++T+GS G+L +K+
Sbjct: 199 -IEDIKEAAHFIEDKGVKNVIVTMGSKGLLWINKD 232
>gi|378731665|gb|EHY58124.1| IdgA domain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 788
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 142/349 (40%), Gaps = 60/349 (17%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV NVA G+ + S + D+AG+ LLE K+ GLST I + D A +
Sbjct: 435 GGVGHNVATAAHFAGASVALASVVADDIAGSSLLESVKNTGLSTADILQLAAADGARTAQ 494
Query: 66 ILDVNGELAAAVASVESIEKFLTPD------WIRQFIHHISSASVLMVDANLSPPALAAS 119
+ VN V ++ + F P+ W + ++VDAN SP L++
Sbjct: 495 YVAVNDRNKDLVVAMADMSIFAHPELEKQEYWTEKMERR--KPKWVVVDANWSPAVLSSI 552
Query: 120 CKIAAECNIPVWFEPVSVTKSRRI-----------TSVV---KYITVVSPNEDELVAMAN 165
A + FEPVS K+ R+ S+V +++ SPN EL A+ N
Sbjct: 553 FTAAKTHQAMLAFEPVSTAKATRLFHKSVWTKTDTDSMVVPNHVVSLASPNSLELTAIYN 612
Query: 166 ALSGENMFRP------ID---------RNKHSA---ESLFQTLKPAILVLLEKGIRLVVL 207
A E MF ID R++ A L Q P + L + +V+
Sbjct: 613 AARNEMMFESEQWWGVIDSLGLSGSSSRDRLMAVAGRDLVQEGIPQQCIQLLPFVPNLVV 672
Query: 208 TLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFF 267
LG G LL + R+ PY SR L H S+ G +
Sbjct: 673 KLGRKGCLLANLLRRGDPRLSSPDYAPYIISRTL-------SHESQVGGV--------YM 717
Query: 268 AVHFPALP---ASVVRLTGAGDCLVGGTLASISSG--LDVMQSVAVDDA 311
+ P++ A +V + G GD ++G +A +++G L+ + VA D A
Sbjct: 718 RLMPPSVEVDQAEIVSVNGIGDTMLGVIVAGLANGRLLEEVVPVAQDAA 766
>gi|365108363|ref|ZP_09336264.1| hypothetical protein HMPREF9428_02133 [Citrobacter freundii
4_7_47CFAA]
gi|363640719|gb|EHL80169.1| hypothetical protein HMPREF9428_02133 [Citrobacter freundii
4_7_47CFAA]
Length = 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVSSCIRLHGHNTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + E A+ +++ LTP + R I H + V++ D NL+ A+ I
Sbjct: 153 IANQQEETVLAINDTHILQQ-LTPQLLNGSRDLIRH---SGVVLADCNLTAEAIEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A + IPV+ + VS K+ ++ + I + P + EL + L G+ + DR +
Sbjct: 209 ADD--IPVFIDTVSEFKAAKVKTWFTRIHTLKPTQKEL----SILWGQPIHSDADRVL-A 261
Query: 183 AESLFQTLKPAILVLLE 199
SL Q I V LE
Sbjct: 262 VNSLHQQGVKRIFVCLE 278
>gi|159467166|ref|XP_001691769.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279115|gb|EDP04877.1| predicted protein [Chlamydomonas reinhardtii]
Length = 254
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 59/95 (62%)
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
GE+AA VA V ++E LTP+ + I A +L+ +ANLS AL C+ AA +PV
Sbjct: 109 GEVAACVADVAAVEAHLTPERLADSAPQIQQACLLLAEANLSEGALEYVCRTAAAARVPV 168
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ EPVSV K+ R+ + Y T VSPN EL++MA+
Sbjct: 169 FIEPVSVPKAARLARSLPYATFVSPNAGELMSMAD 203
>gi|448237526|ref|YP_007401584.1| hypothetical protein GHH_c12960 [Geobacillus sp. GHH01]
gi|445206368|gb|AGE21833.1| hypothetical protein GHH_c12960 [Geobacillus sp. GHH01]
Length = 313
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +L ++S +G D G L++ S ++T I R +T +
Sbjct: 40 GGVARNIAENLGRLAQSVSLVSTVGDDRDGQWLVDV-TSRYVNTSFIVRTPKANTGTYTA 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD GE+ A+A + +I + +W++Q + S +++D N P A+ S + A+
Sbjct: 99 VLDERGEMVLALADM-AIYDTVGEEWLKQQWTRLGPISAVVLDTNF-PKAVIRS--VIAQ 154
Query: 126 C---NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
C +IP+ VSV K +R+ S + +T NE E A + ++ H+
Sbjct: 155 CRQEDIPLCVVTVSVPKVKRLPSDLSGVTWFVTNEAEAKAF------------VGKDGHT 202
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + +L G + VV+T G++GV +K+
Sbjct: 203 GDIM--------KAILHAGAQNVVITRGANGVAYATKQ 232
>gi|432680770|ref|ZP_19916144.1| pyrimidine kinase [Escherichia coli KTE143]
gi|431220167|gb|ELF17547.1| pyrimidine kinase [Escherichia coli KTE143]
Length = 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432370335|ref|ZP_19613422.1| pyrimidine kinase [Escherichia coli KTE10]
gi|430885001|gb|ELC07931.1| pyrimidine kinase [Escherichia coli KTE10]
Length = 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ L +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAETLEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|308068983|ref|YP_003870588.1| ribokinase [Paenibacillus polymyxa E681]
gi|305858262|gb|ADM70050.1| Sugar kinase, ribokinase family [Paenibacillus polymyxa E681]
Length = 348
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E S + ++ + + T V +
Sbjct: 56 GGVARNVAENLGRLSQRVSLLTAVGDDAEGEFIIEQ-SSRYMHVVPLQVKGEPSTGVYTA 114
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ GEL A A +E ++ + P I + + I+S+ ++++D N S +AA+ + E
Sbjct: 115 LLNERGELIVATAEMEIYDQ-IRPSVIFENVPLIASSRLVLLDTNFSMNVIAATIHVCHE 173
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+P+ VS +K R++ + + V P E E ++M A
Sbjct: 174 HRVPIVVSSVSASKMRKLPRNLHGVEWLVCKPAEAEAYLGLELTDDQHML--------DA 225
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V+ G+D VL S++
Sbjct: 226 TRIFHKL----------GVQNVIFICGADRVLYASQD 252
>gi|293410521|ref|ZP_06654097.1| hypothetical protein ECEG_01485 [Escherichia coli B354]
gi|291470989|gb|EFF13473.1| hypothetical protein ECEG_01485 [Escherichia coli B354]
Length = 362
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432815899|ref|ZP_20049683.1| pyrimidine kinase [Escherichia coli KTE115]
gi|431364123|gb|ELG50667.1| pyrimidine kinase [Escherichia coli KTE115]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|415840658|ref|ZP_11522086.1| hypothetical protein ECRN5871_3872 [Escherichia coli RN587/1]
gi|417280948|ref|ZP_12068248.1| HTH domain protein [Escherichia coli 3003]
gi|425278454|ref|ZP_18669700.1| putative kinase [Escherichia coli ARS4.2123]
gi|323188115|gb|EFZ73410.1| hypothetical protein ECRN5871_3872 [Escherichia coli RN587/1]
gi|386245277|gb|EII87007.1| HTH domain protein [Escherichia coli 3003]
gi|408201903|gb|EKI27037.1| putative kinase [Escherichia coli ARS4.2123]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432489837|ref|ZP_19731711.1| pyrimidine kinase [Escherichia coli KTE213]
gi|432839845|ref|ZP_20073331.1| pyrimidine kinase [Escherichia coli KTE140]
gi|433203778|ref|ZP_20387554.1| pyrimidine kinase [Escherichia coli KTE95]
gi|431020454|gb|ELD33799.1| pyrimidine kinase [Escherichia coli KTE213]
gi|431389018|gb|ELG72733.1| pyrimidine kinase [Escherichia coli KTE140]
gi|431721327|gb|ELJ85322.1| pyrimidine kinase [Escherichia coli KTE95]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|450190528|ref|ZP_21890887.1| putative kinase [Escherichia coli SEPT362]
gi|449320506|gb|EMD10537.1| putative kinase [Escherichia coli SEPT362]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + ++ + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHVHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|348574516|ref|XP_003473036.1| PREDICTED: ribokinase-like [Cavia porcellus]
Length = 324
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 53 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGAAS 112
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ IS A V++ ++P + +A
Sbjct: 113 II--VNDEGQNIIVIVAGANLLLNTEDLREAASVISRAKVMVCQLEITPATSLEALTMAR 170
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
C + F P + V NE E A L+G + P + K
Sbjct: 171 NCGVKTLFNPAPAI-ADLAPQFYALSDVFCCNESE----AEILTGLTVSSPEEAGK---- 221
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLL +G ++VV+TLG++G ++ S+
Sbjct: 222 --------AALVLLRRGCQVVVITLGAEGCMMVSQ 248
>gi|331683836|ref|ZP_08384432.1| putative kinase [Escherichia coli H299]
gi|331078788|gb|EGI49990.1| putative kinase [Escherichia coli H299]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + ++ + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHVHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|432862755|ref|ZP_20087044.1| pyrimidine kinase [Escherichia coli KTE146]
gi|431404794|gb|ELG88040.1| pyrimidine kinase [Escherichia coli KTE146]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|387607844|ref|YP_006096700.1| putative pyrimidine kinase [Escherichia coli 042]
gi|432617229|ref|ZP_19853344.1| pyrimidine kinase [Escherichia coli KTE75]
gi|284922144|emb|CBG35226.1| putative pyrimidine kinase [Escherichia coli 042]
gi|431154170|gb|ELE54992.1| pyrimidine kinase [Escherichia coli KTE75]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|425300999|ref|ZP_18690897.1| putative kinase [Escherichia coli 07798]
gi|408213385|gb|EKI37870.1| putative kinase [Escherichia coli 07798]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|331663662|ref|ZP_08364572.1| putative kinase [Escherichia coli TA143]
gi|331059461|gb|EGI31438.1| putative kinase [Escherichia coli TA143]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|345562896|gb|EGX45904.1| hypothetical protein AOL_s00112g93 [Arthrobotrys oligospora ATCC
24927]
Length = 941
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 1 VNYVLGGVARNVAECMSKLGSKP--YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
V Y +GGVA+N+A + +L +SA+G DM G +L+ + G+ST+ + +KD
Sbjct: 485 VTYSVGGVAKNIAATLRQLDPPAPVRFLSAIGKDMNGISVLQELQRLGISTKDVTVKKDS 544
Query: 59 DTAVVS--NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
TA + N +V G L+AA+A ++ I+ D + ++ D NL A+
Sbjct: 545 RTACYAAINSDEVEGGLSAAIADMDVIKSIQGKDIAAAIERY--KPKIVCFDGNLDTAAM 602
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVV--------KYITVVSPNEDEL 160
C A E V EP S KS++I +++ I ++SPN DEL
Sbjct: 603 KELCIAAKEQGALVVCEPTSAPKSKQIANMLADLGLELEHPIDIISPNLDEL 654
>gi|432450324|ref|ZP_19692589.1| pyrimidine kinase [Escherichia coli KTE193]
gi|433034003|ref|ZP_20221719.1| pyrimidine kinase [Escherichia coli KTE112]
gi|430979714|gb|ELC96479.1| pyrimidine kinase [Escherichia coli KTE193]
gi|431551009|gb|ELI24996.1| pyrimidine kinase [Escherichia coli KTE112]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A + IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADQ--IPVFVDTVSEFKAGKIKPWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|306820094|ref|ZP_07453742.1| PfkB family carbohydrate kinase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402310507|ref|ZP_10829471.1| carbohydrate kinase, PfkB family [Eubacterium sp. AS15]
gi|304551872|gb|EFM39815.1| PfkB family carbohydrate kinase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400368430|gb|EJP21441.1| carbohydrate kinase, PfkB family [Eubacterium sp. AS15]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARN+AE +++L + ++S +G D+ G ++++ S + + R ++ +T
Sbjct: 89 FGGVARNIAENLARLDEEVVLMSKVGNDLEGTNIVKN-ASPIMHIYMVDRDQNFNTGTYF 147
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD L VA ++ + + DWI +I A +++ D N+ A+ +I
Sbjct: 148 AVLDKTRNLLLGVADMKICDS-MDEDWITSHQEYIKKADIVVCDTNVQKSAIEKLQEITD 206
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E + VSV K++ I +K I + N+DE A AN + D
Sbjct: 207 E---KIVLIGVSVAKTKNIPDNLKNIYLAILNKDEATAYANC-------KEFD------- 249
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
LK L KG+ ++T+G DG + + L
Sbjct: 250 -----LKTVCDNLKAKGVTRCIITMGEDGCIFYDETL 281
>gi|293415443|ref|ZP_06658086.1| hypothetical protein ECDG_02005 [Escherichia coli B185]
gi|291433091|gb|EFF06070.1| hypothetical protein ECDG_02005 [Escherichia coli B185]
Length = 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A + IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADQ--IPVFVDTVSEFKAGKIKPWLAHIHTLKPTLPEL----EILWGQAITSDADRNA-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|126172908|ref|YP_001049057.1| ribokinase [Shewanella baltica OS155]
gi|160876875|ref|YP_001556191.1| ribokinase [Shewanella baltica OS195]
gi|378710089|ref|YP_005274983.1| ribokinase [Shewanella baltica OS678]
gi|386339712|ref|YP_006036078.1| ribokinase [Shewanella baltica OS117]
gi|418022204|ref|ZP_12661191.1| ribokinase [Shewanella baltica OS625]
gi|125996113|gb|ABN60188.1| ribokinase [Shewanella baltica OS155]
gi|160862397|gb|ABX50931.1| ribokinase [Shewanella baltica OS195]
gi|315269078|gb|ADT95931.1| ribokinase [Shewanella baltica OS678]
gi|334862113|gb|AEH12584.1| ribokinase [Shewanella baltica OS117]
gi|353538429|gb|EHC07984.1| ribokinase [Shewanella baltica OS625]
Length = 303
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 5 LGGVARNVA-EC--MSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
LGG N A C ++K G++ I LG D G+ + + W G+STEGI + + T
Sbjct: 37 LGGKGANQAVACARLAKPGTRTDFICHLGQDSIGDDMRQSWIKDGISTEGISQVAEQSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPA--LAAS 119
+ NGE VA+ L+PD + ++A L+ A L PA +A +
Sbjct: 97 TAMIFIGDNGENTIGVAA--GANATLSPDDLEHHYALFANAQYLL--AQLETPAATVAKA 152
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
K+A + P T V+K++ V++PNE E A AL+G + +D
Sbjct: 153 LKMAKNLGVTTVLNPAPATALGH--DVLKWVDVITPNETE----AEALTGVEI-NHLDDA 205
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ +A+ L Q +G+ +VV+TLGS G + S
Sbjct: 206 QMAAQLLHQ-----------QGVGIVVITLGSRGAYISS 233
>gi|417613625|ref|ZP_12264083.1| hypothetical protein ECSTECEH250_2683 [Escherichia coli STEC_EH250]
gi|345361819|gb|EGW93976.1| hypothetical protein ECSTECEH250_2683 [Escherichia coli STEC_EH250]
Length = 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ L +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEPLEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|304440662|ref|ZP_07400546.1| PfkB family kinase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370849|gb|EFM24471.1| PfkB family kinase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 353
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS I +G D I+ + + T+ + R +++
Sbjct: 93 GGVGRNIAENLARLGSTVSFIGVIGSDAEAQIIEKSLTNVNCDTKDMMRIHGKNSSKYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I D N ++ AVA ++ ++ L ++++ I S +L++D NL A+ + E
Sbjct: 153 IHDENHDMIYAVADMDIMDS-LNVEFLKTKASIIKSFDMLVIDTNLREDAIEYLLSLGVE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
E VSV K+ ++ V I+++ N+ E+ +SG +
Sbjct: 212 T----MVEAVSVNKAIKLRDHVSKISILKANKYEI----EEISGIEVKDE---------- 253
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
++LK A+ L++KGI+ +VLT+G +G + S+
Sbjct: 254 --KSLKEALKSLIDKGIKEIVLTMGEEGAIYYSE 285
>gi|168788975|ref|ZP_02813982.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC869]
gi|261223380|ref|ZP_05937661.1| predicted kinase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259069|ref|ZP_05951602.1| predicted kinase [Escherichia coli O157:H7 str. FRIK966]
gi|421824793|ref|ZP_16260160.1| putative kinase [Escherichia coli FRIK920]
gi|424091133|ref|ZP_17827078.1| putative kinase [Escherichia coli FRIK1996]
gi|424469344|ref|ZP_17919190.1| putative kinase [Escherichia coli PA41]
gi|424494371|ref|ZP_17942147.1| putative kinase [Escherichia coli TW09195]
gi|425181024|ref|ZP_18578730.1| putative kinase [Escherichia coli FRIK1999]
gi|428947776|ref|ZP_19020082.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.1467]
gi|428972249|ref|ZP_19042611.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.0039]
gi|429002675|ref|ZP_19070836.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0183]
gi|189371331|gb|EDU89747.1| kinase, pfkB family [Escherichia coli O157:H7 str. EC869]
gi|390641683|gb|EIN21107.1| putative kinase [Escherichia coli FRIK1996]
gi|390767790|gb|EIO36856.1| putative kinase [Escherichia coli PA41]
gi|390830840|gb|EIO96328.1| putative kinase [Escherichia coli TW09195]
gi|408067845|gb|EKH02273.1| putative kinase [Escherichia coli FRIK920]
gi|408097464|gb|EKH30355.1| putative kinase [Escherichia coli FRIK1999]
gi|427208635|gb|EKV78724.1| pfkB carbohydrate kinase family protein [Escherichia coli 88.1467]
gi|427227991|gb|EKV96475.1| pfkB carbohydrate kinase family protein [Escherichia coli 90.0039]
gi|427261673|gb|EKW27590.1| pfkB carbohydrate kinase family protein [Escherichia coli 95.0183]
Length = 362
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV N+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGHNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + E A+ +E+ L+P + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDETVLAINDTHLLEQ-LSPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 AGE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|373948176|ref|ZP_09608137.1| ribokinase [Shewanella baltica OS183]
gi|386325982|ref|YP_006022099.1| ribokinase [Shewanella baltica BA175]
gi|333820127|gb|AEG12793.1| ribokinase [Shewanella baltica BA175]
gi|373884776|gb|EHQ13668.1| ribokinase [Shewanella baltica OS183]
Length = 303
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 5 LGGVARNVA-EC--MSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
LGG N A C ++K G++ I LG D G+ + + W G+STEGI + + T
Sbjct: 37 LGGKGANQAVACARLAKPGTRTDFICHLGQDSIGDDMRQSWIKDGISTEGISQIAEQSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPA--LAAS 119
+ NGE VA+ L+PD + ++A L+ A L PA +A +
Sbjct: 97 TAMIFIGDNGENTIGVAA--GANATLSPDDLEHHYALFANAQYLL--AQLETPAATVAKA 152
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
K+A + P T V+K++ V++PNE E A AL+G + +D
Sbjct: 153 LKMAKNLGVTTVLNPAPATALGH--DVLKWVDVITPNETE----AEALTGVEI-NHLDDA 205
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ +A+ L Q +G+ +VV+TLGS G + S
Sbjct: 206 QMAAQLLHQ-----------QGVGIVVITLGSRGAYISS 233
>gi|432869529|ref|ZP_20090122.1| pyrimidine kinase [Escherichia coli KTE147]
gi|431410115|gb|ELG93277.1| pyrimidine kinase [Escherichia coli KTE147]
Length = 362
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V CS++
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESV-YCSEK 287
>gi|300814912|ref|ZP_07095143.1| HTH domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511002|gb|EFK38271.1| HTH domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 355
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 43/229 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+ +++LG K IS LG D +G+ + S + T I
Sbjct: 88 IKYSSGGVGRNICADLARLGIKTSFISVLGTDASGSFIKNELSSINVDTSNI-------- 139
Query: 61 AVVSN-------ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
+VS ILD + ++ A++ ++ ++K + D+++ H ISS+ + ++D NL
Sbjct: 140 LIVSGSTPHYLAILDDSKDMELAISDMDLVKK-IDKDFLQGKRHIISSSKLTILDTNLEE 198
Query: 114 PALAASCKIAAECNIPVWF--EPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
AL K NIP + + VS K ++ + + YI + NE E A AL+ E
Sbjct: 199 EALGYLFK-----NIPSKYLVDGVSTKKVVKLKNYLPYIYFLKVNEYE----AKALTDE- 248
Query: 172 MFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
K E + + LL+KG+ + +TLGS G SK+
Sbjct: 249 --------KDDIEKIAEE-------LLDKGLNSLCITLGSKGAYYFSKK 282
>gi|283768389|ref|ZP_06341301.1| kinase, PfkB family [Bulleidia extructa W1219]
gi|283104781|gb|EFC06153.1| kinase, PfkB family [Bulleidia extructa W1219]
Length = 311
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+A+ + LG ++ D +L E + G+ ++ +++
Sbjct: 36 FGGVGRNIAQICALLGENVQFVTCFASDPYAKMLKEDCRKLGIDISKSSETEEYPSSIYM 95
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD N ++ A++ + I + + + + + + L++DANL ++ K A
Sbjct: 96 AILDQNRDMKIAMSDMR-ILRAMDTALLDRALEDLDEGDALILDANLDLKSIEYLTKQAK 154
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVSV KS+R+ SV+ ++ V PN+ E A+ N +
Sbjct: 155 SFLVA---DPVSVQKSKRLVSVLPHLNVFKPNQYEAEALTNIFVKDK------------- 198
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+T + + L +G++ ++++L GV+L S E
Sbjct: 199 ---ETARQCLSWFLNQGVQEIIVSLADQGVILGSSE 231
>gi|257425634|ref|ZP_05602058.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428295|ref|ZP_05604693.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430932|ref|ZP_05607312.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433621|ref|ZP_05609979.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436534|ref|ZP_05612578.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M876]
gi|282914316|ref|ZP_06322102.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M899]
gi|282919285|ref|ZP_06327020.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C427]
gi|282924610|ref|ZP_06332278.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C101]
gi|293503392|ref|ZP_06667239.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510407|ref|ZP_06669113.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M809]
gi|293530947|ref|ZP_06671629.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M1015]
gi|417887891|ref|ZP_12532010.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21195]
gi|257271328|gb|EEV03474.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275136|gb|EEV06623.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278362|gb|EEV08998.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281714|gb|EEV11851.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus E1410]
gi|257283885|gb|EEV14008.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M876]
gi|282313445|gb|EFB43840.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C101]
gi|282317095|gb|EFB47469.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C427]
gi|282321497|gb|EFB51822.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M899]
gi|290920215|gb|EFD97281.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M1015]
gi|291095058|gb|EFE25323.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466771|gb|EFF09291.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M809]
gi|341856920|gb|EGS97747.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21195]
Length = 299
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFADMD-IYNLINNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRNKH 181
+ NIP+ P S+ K R I + I + N+ E A N +L+ ++ ++ I +
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWNVSLNTKSDYKKIKQISK 215
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
++E I+ +V+T G+D + + EL
Sbjct: 216 TSE-----------------IKNIVITNGNDDIFYTNGEL 238
>gi|403236469|ref|ZP_10915055.1| ribokinase [Bacillus sp. 10403023]
Length = 313
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG+ M+ +G D+ G LL G+ T GI + + + + V
Sbjct: 39 GGKGGNQAYAASKLGASVAMLGCVGDDIFGEQLLNGLNEVGVDTSGIEKVQGVSSGVA-- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ VN E ++ +TP+++++ I +A ++M+ + + KIA +
Sbjct: 97 VISVNSEGENSIIVSPGANDHVTPEYVKRHEQIIIAAKLVMMQLEIPLETVIEVAKIAHK 156
Query: 126 CNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+PV +P K + V YI PNE EL + + + D+
Sbjct: 157 HNVPVMLDPAPAVKLPDELYQKVSYIV---PNESELGVITD-------LKISDK------ 200
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLS 223
+T K A L+++G+ V LG GVL+ SKE S
Sbjct: 201 ---ETAKTASEKLMKQGVGTVFAKLGGKGVLV-SKETES 235
>gi|115400715|ref|XP_001215946.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191612|gb|EAU33312.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 769
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 139/344 (40%), Gaps = 56/344 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++ +GGV +NVA LGS S +G D+ G L ++ LST GI+ T
Sbjct: 416 ISQSIGGVGQNVAIAAHYLGSSVLFCSVVGDDLGGRTALAGLRAENLSTTGIQMLTGSRT 475
Query: 61 AVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
A I D +L A+A +E E L D + + + + ++VDAN SP +
Sbjct: 476 AQYVAINDAKKDLVLAMADMGIMEQPETALDFDTVWEPLVARTKPQWVIVDANWSPAVMG 535
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRI----------TSVVKY--ITVVSPNEDELVAMAN 165
+A V EPVS KSRR+ V + +++ +PN+ EL M
Sbjct: 536 RWIAVARRHGARVAVEPVSTAKSRRLFDGADAPISAADCVPHHAVSLAAPNQLELAEMYA 595
Query: 166 ALSGENMFRP------ID---------RNK----HSAESLFQTLKPAILVLLEKGIRLVV 206
A +F ID R++ SA+ + Q + P + L I +V
Sbjct: 596 AAREHGLFDSDGWWGVIDAMGMSSAGSRDRLVALTSAQLVDQGI-PQQSIQLLPFIPCIV 654
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LG+ GVL+ R+ ++ PY SR A AG
Sbjct: 655 TKLGAQGVLVTQLLRPGDPRLTAPESAPYILSR-----------------ASGDAGIGGV 697
Query: 267 FAVHFPALP----ASVVRLTGAGDCLVGGTLASISSGLDVMQSV 306
+ FP A VV + GAGD L+G ++ ++ G ++ V
Sbjct: 698 YMRLFPPAAVLADADVVSVNGAGDTLLGAVVSGLARGAATVEEV 741
>gi|358367593|dbj|GAA84211.1| IdgA domain protein [Aspergillus kawachii IFO 4308]
Length = 781
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 139/337 (41%), Gaps = 55/337 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA L S S +G D++G L + GLST GI+
Sbjct: 427 IGQSLGGVGHNVAIAARYLDSSVLFCSVVGDDLSGQAALSSLRQEGLSTNGIKVLPPSSG 486
Query: 58 IDTAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA + D +L A+A +E E+ L D + + + +VD N +
Sbjct: 487 ARTAQYIAVNDAKKDLVVAMADMAIMELPEQALDFDSFWEPMMSRAQPQWAVVDGNWNDE 546
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI-TSVVK--------YITVVSPNEDELVAMAN 165
L+ +A + V FEPVS KSRR+ S +K +++ +PN+ EL AM
Sbjct: 547 VLSKWVSLAKKHKARVAFEPVSTAKSRRLFGSAIKPSDCVPNNTVSLAAPNQFELAAMYQ 606
Query: 166 A------LSGENMFRPID----RNKHSAESLFQTLKPAILV---LLEKGIRL------VV 206
A L E +R ID S E L + A LV + ++ I+L V+
Sbjct: 607 AARENGHLDSEEWWRIIDAMGMTGSGSRERLV-AMTSATLVDQGIPQQSIQLLPFIPCVL 665
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LG +GVLL R+ ++ PY SR L G + GG
Sbjct: 666 TKLGREGVLLTQLLRPGDARLTSPESAPYILSRALTS-----------DGLI---GG--V 709
Query: 267 FAVHFPAL----PASVVRLTGAGDCLVGGTLASISSG 299
+ FPA +V + GAGD L+G + ++ G
Sbjct: 710 YLRLFPAAAELDEKDIVSVNGAGDTLLGAVVTGLARG 746
>gi|420321034|ref|ZP_14822864.1| pfkB carbohydrate kinase family protein [Shigella flexneri 2850-71]
gi|391248327|gb|EIQ07569.1| pfkB carbohydrate kinase family protein [Shigella flexneri 2850-71]
Length = 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +L E + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLQEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|282911147|ref|ZP_06318949.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|384867517|ref|YP_005747713.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH60]
gi|282324842|gb|EFB55152.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312438022|gb|ADQ77093.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH60]
Length = 299
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 110/220 (50%), Gaps = 21/220 (9%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFADMD-IYNLVNNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRNKH 181
+ NIP+ P S+ K R I + I + N+ E A N +L+ ++ ++ I +
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWNVSLNTKSDYKKIKQISK 215
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
++E I+ +V+T G+D + + EL
Sbjct: 216 TSE-----------------IKNIVITNGNDDIFYTNGEL 238
>gi|392957896|ref|ZP_10323416.1| ribokinase [Bacillus macauensis ZFHKF-1]
gi|391876245|gb|EIT84845.1| ribokinase [Bacillus macauensis ZFHKF-1]
Length = 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KLGS+ M+S +G D+ + L + K+ + TE + K + V
Sbjct: 37 GGKGANQAVAAAKLGSRVMMVSKVGDDLFADATLANMKAHRIDTEYVTAVKGATSGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D + ++ ++ L P+ + Q + S+++V + P + + E
Sbjct: 97 FVDPASQ--NSILIIKGANAHLMPEDVDQASAKLKQCSLIIVQLEIPLPTVYKAIAFGNE 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P + + + V + + PNE EL L+G P+D ++ A+
Sbjct: 155 HNIPVILNPAPASTNLDYSYVCRSDFFI-PNETEL----EILTG----LPVDGEENIAK- 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
A + L+E+G++ V++T+GS G +L +KE ++++
Sbjct: 205 -------AAMTLVERGVKNVIVTMGSRGAMLVTKETVTTL 237
>gi|420373831|ref|ZP_14873894.1| pseudouridine kinase [Shigella flexneri 1235-66]
gi|391316854|gb|EIQ74239.1| pseudouridine kinase [Shigella flexneri 1235-66]
Length = 362
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R +T+ +
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAVGSDFYGETLLEQTRQAGVNVSSCIRLHGHNTSTYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + E A+ +++ LTP + R I H + V++ D NL+ A+ I
Sbjct: 153 IANQQEETVLAINDTHILQQ-LTPQLLNGSRDLIRH---SGVVLADCNLTAEAIEWVFTI 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
A + IPV+ + VS K+ ++ + I + P + EL
Sbjct: 209 ADD--IPVFIDTVSEFKAAKMKTWFTRIHTLKPTQKEL 244
>gi|300796105|ref|NP_001178200.1| ribokinase [Bos taurus]
gi|296482336|tpg|DAA24451.1| TPA: ribokinase-like [Bos taurus]
Length = 325
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 54 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGAAS 113
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + V L + +R+ IS A V++ ++P + +IA
Sbjct: 114 IIVDNEGQ--NIIVIVAGANLLLNTEDLREAASAISRAKVMICQLEVTPATSLEALRIAH 171
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + P D +
Sbjct: 172 SNGVKTLFNPAPAIADLD-PEFYTLSDVFCCNESE----AEILTGLEVCSPTDAGR---- 222
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLLE+G ++V++TLG++G ++ S+
Sbjct: 223 --------AALVLLERGCQVVIITLGAEGCVMLSQ 249
>gi|189211335|ref|XP_001941998.1| IdgA domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978091|gb|EDU44717.1| IdgA domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 804
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 137/345 (39%), Gaps = 49/345 (14%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID- 59
+ LGGVA N+A+ LGS + SA+G D++G + + G+S GI
Sbjct: 443 ITQTLGGVAHNIAKAAHLLGSSVRLHSAVGDDLSGRAAIAQLQEEGMSVSGIETLPGPSR 502
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI-------SSASVLMVDANLS 112
TA I + N +LA A+A + +E PD + ++ V + DAN S
Sbjct: 503 TAQYVAINNTNKDLALAMADMSILETI--PDTTTSHLANLIFNNSTFHRPKVFVADANWS 560
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRI----------TSVVKY--ITVVSPNEDEL 160
AL + A + N FEPVS K+ RI SV + + +PN EL
Sbjct: 561 SSALHIWLQSARQKNTTTIFEPVSTAKALRIFPPASTTAPSPSVYPHPLAHITTPNIHEL 620
Query: 161 VAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRL-VVLTLGSD----GVL 215
A+ +N F + S F + L + G+R+ + LT+GSD G
Sbjct: 621 TALHTYAEEKNFFS-------TTPSWFTIID--ALGIPTTGLRVPLALTVGSDVVDRGTP 671
Query: 216 LCSKELLSSMRIGLRKTKPYG--------FSRDLYKTVTSRCH--SSRYSGAMEPAGGS- 264
+ +LL L K P G F+ + T R + +G E G
Sbjct: 672 QQAIKLLPFFPTILTKLGPKGVLMTRLLPFNDPALQDDTERQFVLARNMNGDAESGVGGL 731
Query: 265 --QFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307
+ F V P V+ + G GD G ++S G + VA
Sbjct: 732 YVRLFPVEKVLQPEEVISVNGIGDTFCGALAHTLSQGRRIQDVVA 776
>gi|440899100|gb|ELR50466.1| Ribokinase [Bos grunniens mutus]
Length = 325
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 54 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGAAS 113
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + V L + +R+ IS A V++ ++P + +IA
Sbjct: 114 IIVDNEGQ--NIIVIVAGANLLLNTEDLREAASAISRAKVMICQLEVTPATSLEALRIAH 171
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + P D +
Sbjct: 172 SNGVKTLFNPAPAIADLD-PEFYTLSDVFCCNESE----AEILTGLEVCSPTDAGR---- 222
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLLE+G ++V++TLG++G ++ S+
Sbjct: 223 --------AALVLLERGCQVVIITLGAEGCVMLSQ 249
>gi|320159952|ref|YP_004173176.1| ribokinase [Anaerolinea thermophila UNI-1]
gi|319993805|dbj|BAJ62576.1| ribokinase [Anaerolinea thermophila UNI-1]
Length = 303
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 26/216 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+K MI +G D G+ LL + G+ T IRR T V
Sbjct: 39 GGKGANQAVAAARLGAKVRMIGRVGQDAFGDALLATVQRDGVDTTFIRRDPQAPTGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
LD G+ VAS ++ + +RQ A VL+V A+ + ++A +
Sbjct: 99 TLDAKGQNTIVVAS--GANGNVSAEDVRQSAQAFEGADVLLVQLECPLEAVQTAVQLAHQ 156
Query: 126 CNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P + +V Y+ PN+ EL +A +S DR +
Sbjct: 157 AGIIVVLNPAPAQPLPAELLQMVDYLI---PNQHELTLLAGGIS--------DREQ---- 201
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
AI L +G+R +V+TLG +G LL E
Sbjct: 202 --------AIRHLQAQGVRYLVVTLGEEGALLALGE 229
>gi|417688676|ref|ZP_12337917.1| hypothetical protein SB521682_0929 [Shigella boydii 5216-82]
gi|332093223|gb|EGI98283.1| hypothetical protein SB521682_0929 [Shigella boydii 5216-82]
Length = 362
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
G V RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GSVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRN--- 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 260 ---------AAVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|296125710|ref|YP_003632962.1| PfkB domain-containing protein [Brachyspira murdochii DSM 12563]
gi|296017526|gb|ADG70763.1| PfkB domain protein [Brachyspira murdochii DSM 12563]
Length = 315
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
+N GGV RN+ +S +G K ++++G D+ G+IL ++ KS G+ T I R K
Sbjct: 33 INVCAGGVERNIVNNLSNIGLKNIKFVTSIGNDIFGDILFDNIKSLGIDTSYIVR-KGSS 91
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T+ ++ I++ + ++ AV+ ++S++K + ++ I++A ++ +DA +
Sbjct: 92 TSYIA-IMNNDKDMEIAVSDMDSLDKNIDIKYLESIHETIANAKLITIDAVMGRNIF--E 148
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
I N + + VSV K+ I + +I + N +E + +DR+
Sbjct: 149 YLINNFPNKKLISDAVSVKKAEHIKGIENHIYALKINSNEASFL------------LDRD 196
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
++ + K A+ + L+KG++ + +T G+ G+ + E + +G+ K
Sbjct: 197 INTIDEG----KEAVKIFLDKGVKEIYITFGALGICYGTNEDYKAYHLGVPK 244
>gi|390453707|ref|ZP_10239235.1| ribokinase [Paenibacillus peoriae KCTC 3763]
Length = 347
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E + ++ ++ + + T V +
Sbjct: 55 GGVARNVAENLGRLSQQVSLLTAVGDDAEGEFIVEQSRLY-MNVVPLQVKGEPSTGVYTA 113
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GEL A A ++ ++ + P I + I I+S+ ++++D N S +++ + E
Sbjct: 114 LLDEHGELIVATAEMDIYDQ-IRPSAILENIPLITSSRLVLLDTNFSMNIISSIIPLCHE 172
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP+ VS +K RR+ +K ++ + N E A A G M D+ A
Sbjct: 173 HQIPLVVASVSASKMRRLPRNLKGVSWLVCNRME----AEAYLG--MQFTDDQQLLDAAR 226
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V+L G D V+ S++
Sbjct: 227 IFHQL----------GVQNVILFRGVDSVVFTSQD 251
>gi|442592234|ref|ZP_21010214.1| Pseudouridine kinase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441608387|emb|CCP99240.1| Pseudouridine kinase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
Length = 262
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 19 LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78
LG+K +++SA+G D G LL +G+ + +T+ ++LD GE+ A+
Sbjct: 2 LGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAIN 61
Query: 79 SVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT 138
+ +I +T +++ Q I A V++ D N+S ALA AA N+PV+ +PVS
Sbjct: 62 DM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAA--NVPVFVDPVSAW 118
Query: 139 KSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRNKHSAESLFQTLKPAILVL 197
K ++ + I + PN E ++ ALSG + + H
Sbjct: 119 KCVKVRDRLNQIHTLKPNRLEAETLSGIALSGRDDVAKVAAWFH---------------- 162
Query: 198 LEKGIRLVVLTLGSDGV 214
+ G+ +VL++G DGV
Sbjct: 163 -QHGLNRLVLSMGGDGV 178
>gi|424739055|ref|ZP_18167477.1| putative sugar kinase yeiI [Lysinibacillus fusiformis ZB2]
gi|422946920|gb|EKU41322.1| putative sugar kinase yeiI [Lysinibacillus fusiformis ZB2]
Length = 363
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ +GGV RN+AE + +L + +++ G D ++ E +S ++ + + + T
Sbjct: 90 FSVGGVGRNIAENLGRLNHQVTLLTTAGKDADWQVIQEASESF-MNLRYVEQLAEASTGS 148
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ I+D GELA AVA++E + L P +++ + +A ++D N +A ++
Sbjct: 149 YTAIMDEQGELALAVANME-VYDLLLPSLLKKHETMLVNAGCFILDLNCPKETVAYIQQV 207
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A +IP+ PVS K R+ ++ +T N DE A + G I+ H
Sbjct: 208 ALARDIPLVIVPVSSPKMNRLPETLQGVTWFICNTDE----AETIVG----HKIENATHY 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
++L Q LL+ G V++T GS GV S
Sbjct: 260 EKALQQ--------LLQLGAEHVIITAGSKGVYAAS 287
>gi|419197620|ref|ZP_13741008.1| hypothetical protein ECDEC8A_2727 [Escherichia coli DEC8A]
gi|378047152|gb|EHW09524.1| hypothetical protein ECDEC8A_2727 [Escherichia coli DEC8A]
Length = 195
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 52 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 111
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 112 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 170
Query: 126 CNIPVWFEPVSVTKSRRITS 145
IP++ + VS K+ ++ +
Sbjct: 171 --IPMFVDTVSEFKANKVKT 188
>gi|227508935|ref|ZP_03938984.1| carbohydrate kinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227191612|gb|EEI71679.1| carbohydrate kinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 317
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 10 RNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDV 69
+N+A+ ++ L Y+I+ G D G +L E + + + ++ ++ I D
Sbjct: 49 QNIAQNLAHLDVPTYLITVYGNDYNGQVLKESCRQNKILLDYAAEIENQRSSTYMYITDE 108
Query: 70 NGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIP 129
G++ V +E I K ++P ++++ + I++A + +VDANL+ + I +P
Sbjct: 109 TGDMLVGVNDME-ICKQISPSFLKKRLDFINNAKLCLVDANLAKETIDW---IGQNVEVP 164
Query: 130 VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQT 189
++ + VS K+R + ++ +T + PN E A+ L+G + R++ +A
Sbjct: 165 LFGDTVSCAKARHLEGILDKMTTLKPNALE----ASLLTGIEI-----RDEETA------ 209
Query: 190 LKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
K A LL++G++ V ++LG+ G+L ++
Sbjct: 210 -KEAAQALLDRGVQNVYISLGAKGILCANQ 238
>gi|295703058|ref|YP_003596133.1| ribokinase [Bacillus megaterium DSM 319]
gi|294800717|gb|ADF37783.1| ribokinase [Bacillus megaterium DSM 319]
Length = 292
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ MI +G D G +LE++KS G+S ++ D+D+
Sbjct: 36 VPGGKGANQAVAAARLGADVSMIGCVGEDHYGKAILENFKSNGVSVNNVKPVTDLDSGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ ++TPD++ + I A ++++ + + ++
Sbjct: 96 HIIL---AEGDNSIVVVKGANDYITPDYVEKAKEKIKEADIVLIQQEIPEETVEYVAQLC 152
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
E +P+ P + V++ ++ ++PNE E
Sbjct: 153 QELKVPLLLNPAPARPLK--AEVIEQVSYITPNEHE 186
>gi|389695474|ref|ZP_10183116.1| sugar kinase, ribokinase [Microvirga sp. WSM3557]
gi|388584280|gb|EIM24575.1| sugar kinase, ribokinase [Microvirga sp. WSM3557]
Length = 317
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNVAE +++LG++ ++S +G D G LL+H G+ T + TA
Sbjct: 40 FGGVARNVAENIARLGTQVSLVSIVGDDDNGRALLDHLNRLGIDTRPVVLSSTHATAEYV 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L +GELA +A + +I ++P + + SA + D NL P L +A
Sbjct: 100 AVLQPDGELAIGLADM-AILDGISPALLHRARPGFGSAWIF-ADCNLPPETLHELIGLAR 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + + + VS K R+ + I V N DE +DR + S E
Sbjct: 158 QHALMLALDAVSTPKVARLPQDLSGIGVFFLNLDEARVY------------LDRPEISPE 205
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+ Q LL +G V+LTLGS G++
Sbjct: 206 ASAQA-------LLARGAEQVILTLGSRGLV 229
>gi|295093931|emb|CBK83022.1| Sugar kinases, ribokinase family [Coprococcus sp. ART55/1]
Length = 321
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N+ +SK G K I +G DM GN L+E K AG+ T GI + T +
Sbjct: 35 GGAPVNMLTAVSKAGLKTAFIGKVGDDMHGNFLVETAKQAGIDTRGIVVDDTVFTTLAFV 94
Query: 66 ILDVNGELAAAVASVESIEKFL-----TPDWIRQF-IHHISSASVLMVDANLSPPALAAS 119
LD NGE + A + L D +R + HI S S+ A +
Sbjct: 95 TLDENGEREFSFARKPGADTMLCYKEVDADLLRDTKVFHIGSLSLTDEPARTTTFQAVKE 154
Query: 120 CK-----IAAECNI--PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
K I+ + N P+W + + R+ S++ ++ ++ +++E +
Sbjct: 155 AKKYGAVISYDPNYRAPLWDSRENAME--RMKSILPFVDIMKLSDEETA----------L 202
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
P + +AE LL G+RLV +TLGS+GVL+CS++
Sbjct: 203 LTPFSDPEEAAE-----------YLLGSGVRLVAVTLGSEGVLICSRD 239
>gi|426223330|ref|XP_004005828.1| PREDICTED: ribokinase isoform 1 [Ovis aries]
Length = 326
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 55 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGAAS 114
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + V L + +R+ I A V++ ++P + +IA
Sbjct: 115 IIVDSEGQ--NIIVIVAGANLLLNTEDLREAASAIRRAKVMICQLEVTPATSLEALRIAH 172
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + P D K
Sbjct: 173 SNGVKTLFNPAPAIADLD-PEFYTLSDVFCCNESE----AEILTGLEVGSPTDAGK---- 223
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLLE+G ++V++TLG++G ++ S+
Sbjct: 224 --------AALVLLERGCQVVIITLGAEGCVMLSQ 250
>gi|145234426|ref|XP_001400584.1| IdgA domain protein [Aspergillus niger CBS 513.88]
gi|134057530|emb|CAK48884.1| unnamed protein product [Aspergillus niger]
Length = 781
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 139/337 (41%), Gaps = 55/337 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA L S S +G D++G L + GLST GI+
Sbjct: 427 IGQSLGGVGHNVAIAARYLDSSVLFCSVVGDDLSGQAALSSLRQEGLSTTGIKVLPPSSG 486
Query: 58 IDTAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA + D +L A+A +E E+ L D + + + +VDAN +
Sbjct: 487 ARTAQYIAVNDAKKDLVVAMADMAIMELPEQALDFDNFWEPMMSRAQPQWAVVDANWNGE 546
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI-TSVVK--------YITVVSPNEDELVAMAN 165
L+ +A + V FEPVS KSRR+ S VK +++ +PN+ EL AM
Sbjct: 547 VLSKWVALAKKHKARVAFEPVSTAKSRRLFGSAVKPSDCVPNNTVSLAAPNQFELAAMYQ 606
Query: 166 A------LSGENMFRPID----RNKHSAESLFQTLKPAILV---LLEKGIRLV------V 206
A L E +R ID S E L + A LV + ++ I+L+ +
Sbjct: 607 AARRSGHLDSEEWWRIIDAMGMTGAGSRERLV-AMTSATLVDQGIPQQSIQLLPFIPCML 665
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LG +GVLL R+ + PY SR L G + GG
Sbjct: 666 TKLGREGVLLTQLLRPGDTRLTSPDSAPYILSRALTS-----------DGLI---GG--V 709
Query: 267 FAVHFPAL----PASVVRLTGAGDCLVGGTLASISSG 299
+ FPA +V + GAGD L+G + ++ G
Sbjct: 710 YLRLFPAAAKLEEQDIVSVNGAGDTLLGAVVTGLARG 746
>gi|350635256|gb|EHA23618.1| hypothetical protein ASPNIDRAFT_174693 [Aspergillus niger ATCC
1015]
Length = 776
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 139/337 (41%), Gaps = 55/337 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA L S S +G D++G L + GLST GI+
Sbjct: 422 IGQSLGGVGHNVAIAARYLDSSVLFCSVVGDDLSGQAALSSLRQEGLSTTGIKVLPPSSG 481
Query: 58 IDTAVVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA + D +L A+A +E E+ L D + + + +VDAN +
Sbjct: 482 ARTAQYIAVNDAKKDLVVAMADMAIMELPEQALDFDNFWEPMMSRAQPQWAVVDANWNGE 541
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRI-TSVVK--------YITVVSPNEDELVAMAN 165
L+ +A + V FEPVS KSRR+ S VK +++ +PN+ EL AM
Sbjct: 542 VLSKWVALAKKHKARVAFEPVSTAKSRRLFGSAVKPSDCVPNNTVSLAAPNQFELAAMYQ 601
Query: 166 A------LSGENMFRPID----RNKHSAESLFQTLKPAILV---LLEKGIRLV------V 206
A L E +R ID S E L + A LV + ++ I+L+ +
Sbjct: 602 AARRSGHLDSEEWWRIIDAMGMTGAGSRERLV-AMTSATLVDQGIPQQSIQLLPFIPCML 660
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LG +GVLL R+ + PY SR L G + GG
Sbjct: 661 TKLGREGVLLTQLLRPGDTRLTSPDSAPYILSRALTS-----------DGLI---GG--V 704
Query: 267 FAVHFPAL----PASVVRLTGAGDCLVGGTLASISSG 299
+ FPA +V + GAGD L+G + ++ G
Sbjct: 705 YLRLFPAAAKLEEQDIVSVNGAGDTLLGAVVTGLARG 741
>gi|417597474|ref|ZP_12248116.1| hypothetical protein EC30301_2612 [Escherichia coli 3030-1]
gi|417602752|ref|ZP_12253322.1| hypothetical protein ECSTEC94C_2549 [Escherichia coli STEC_94C]
gi|419002702|ref|ZP_13550229.1| HTH domain protein [Escherichia coli DEC1B]
gi|419261720|ref|ZP_13804142.1| HTH domain protein [Escherichia coli DEC10B]
gi|345350418|gb|EGW82693.1| hypothetical protein ECSTEC94C_2549 [Escherichia coli STEC_94C]
gi|345353759|gb|EGW85988.1| hypothetical protein EC30301_2612 [Escherichia coli 3030-1]
gi|377847581|gb|EHU12579.1| HTH domain protein [Escherichia coli DEC1B]
gi|378106769|gb|EHW68397.1| HTH domain protein [Escherichia coli DEC10B]
Length = 236
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG ++ISA+G D G LLE + AG++ R TA
Sbjct: 93 GGVGRNIAHNLALLGRDVHLISAIGNDFYGETLLEETRRAGVNVSNCIRLHGHSTATYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + E A+ +++ LTP + I A V++ D NL+P AL IA E
Sbjct: 153 IANKQEETILAINDTHILQQ-LTPQLLNTSRDLIRHAGVVLADCNLTPEALEWVFTIADE 211
Query: 126 CNIPVWFEPVSVTKSRRITS 145
IP++ + VS K+ ++ +
Sbjct: 212 --IPMFVDTVSEFKANKVKT 229
>gi|443327230|ref|ZP_21055860.1| ribokinase [Xenococcus sp. PCC 7305]
gi|442793169|gb|ELS02626.1| ribokinase [Xenococcus sp. PCC 7305]
Length = 310
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A N A ++KLG Y I +G D G +LLE+ + AG+ T G+ + V S
Sbjct: 37 GGKAANQAVAVAKLGVPVYSIGRVGSDNFGQVLLENLQLAGVDTTGVTIDSQSHSGVASI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D G+ A A A+ + ++ F I A V++++ + P + + + A
Sbjct: 97 VVDQRGDNAIACAA--GANNLVRETELKAFEKIIPQAKVILIELGIPLPTVMEALRRAKS 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N P+ +P +S + K + +++PNE E A+ L G +
Sbjct: 155 SNCPIILDPAP-ARSSLPEELYKLVDIITPNEIE----ASQLVGFTV------------D 197
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T + A L + G + V++TLGS G + E
Sbjct: 198 GITTARQAASFLHQMGAKKVIITLGSQGAFCSTGE 232
>gi|70989719|ref|XP_749709.1| IdgA domain protein [Aspergillus fumigatus Af293]
gi|66847340|gb|EAL87671.1| IdgA domain protein [Aspergillus fumigatus Af293]
Length = 768
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 136/346 (39%), Gaps = 70/346 (20%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
+ LGGV NVA LGS S +G D++G L + GL T G++
Sbjct: 402 IGQSLGGVGHNVAIASHYLGSSVLFCSVVGDDLSGRAALSTLQEEGLPTAGVQILPASSG 461
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQF-------IHHISSASVLMVDAN 110
TA I D +L A+A + +E P+ + F I H V+ VDAN
Sbjct: 462 ARTAQYVAINDAKRDLVVAMADMGIME---LPEHVLDFDGFWDPLIRHTQPQWVV-VDAN 517
Query: 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSP 155
SP LA +A + V FEPVS KSRR+ S I++ +P
Sbjct: 518 WSPAVLARWIAVAKQHGARVAFEPVSTAKSRRLFSKTSEADAVIQPAKAVPNNAISLAAP 577
Query: 156 NEDELVAMANALSGENMF-------RPID---------RNK----HSAESLFQTLKPAIL 195
N+ EL AM +F R ID R++ +AE + Q + P
Sbjct: 578 NQYELSAMYTTARESGLFEESEGWWRIIDAMGMSATGSRDRLVAMTTAELVDQGI-PQQS 636
Query: 196 VLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255
+ L I ++ LG+ GVL+ R+ + PY SR S
Sbjct: 637 IQLIPFIPCIITKLGAQGVLVTQLLRPGDARLTSPDSAPYIL--------------SRAS 682
Query: 256 GAMEPAGGSQFFAVHFPALPA----SVVRLTGAGDCLVGGTLASIS 297
E GG + FP+ +V + GAGD L+G +A ++
Sbjct: 683 PTDELIGG--VYMRLFPSAGVLADREIVSVNGAGDTLLGAVVAGLA 726
>gi|291386999|ref|XP_002709992.1| PREDICTED: ribokinase [Oryctolagus cuniculus]
Length = 322
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLREAANVISRAKVMICQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ +V NE E A L+G + P D K +
Sbjct: 169 SSGVKTLFNPAPALADLDPRFYTLS---SVFCCNESE----AEILTGLTVGSPADAGKAA 221
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ VLLE+G ++V++TLG++G ++ S+
Sbjct: 222 S------------VLLERGCQVVIITLGAEGCVMLSQ 246
>gi|379795870|ref|YP_005325868.1| pfkB family carbohydrate kinase (fragment), partial [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356872860|emb|CCE59199.1| pfkB family carbohydrate kinase (fragment) [Staphylococcus aureus
subsp. aureus MSHR1132]
Length = 198
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D G+ +L + + + I+ +++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEGDYILNE-ANKFIDLKHIKSIDNMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ +A ++ I + ++ + I I + ++VD+N+ ++ S ++
Sbjct: 97 FTSVIDYNGEMICGIADMD-IYNLINNKYLNEKIEVIKNVDFVVVDSNIPKESIQYSIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ NIP+ P S+ K + I + I + N+ E A N
Sbjct: 156 CGKSNIPIGIIPASIKKVKNIPKNLARIDYLIFNKKEAEAFWN 198
>gi|307154739|ref|YP_003890123.1| ribokinase [Cyanothece sp. PCC 7822]
gi|306984967|gb|ADN16848.1| ribokinase [Cyanothece sp. PCC 7822]
Length = 305
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 65/294 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG M+ +G D G LL+ +SAG++T+G+ D + V S
Sbjct: 37 GGKGANGAVAIAKLGIPVSMVGQVGGDQFGETLLKGLQSAGVNTQGVIINPDTHSGVASI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D +G+ +A + I+QF + A V+ ++ + + A+ A+
Sbjct: 97 VVDQHGD--NTIACAGGANSLVGDAEIQQFKALLPGAKVVSLELGIPLDVVVAAASAASA 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ V +P ++ + I +++PNE E A+ L G + P
Sbjct: 155 ADCIVILDPAP-ARNDLPDELYPLIDIITPNEVE----ASQLVGFPVIDP---------- 199
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+T A L+L ++G++ V++TLGS G L CS
Sbjct: 200 --ETATRAALILQQRGVKTVIVTLGSQGALCCSAN------------------------- 232
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
FF PAL SVV AGD GG +A+++SG
Sbjct: 233 ------------------ETFF---VPALSVSVVDTVAAGDAFNGGLVAALASG 265
>gi|386040899|ref|YP_005959853.1| PfkB family carbohydrate kinase [Paenibacillus polymyxa M1]
gi|343096937|emb|CCC85146.1| PfkB family carbohydrate kinase [Paenibacillus polymyxa M1]
Length = 348
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E S ++ ++ + + T V +
Sbjct: 56 GGVARNVAENLGRLSRRVSLLTAVGDDAEGEFIIEQ-SSRYMNVIPLQVKGESSTGVYTA 114
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ +GE+ A A +E ++ + P I + I I+S+ ++++D N S +AA+ + E
Sbjct: 115 LLNEHGEMIVATAEMEIYDQ-IRPSIIFENIPLIASSRLVLLDTNFSMNVIAATIHVCLE 173
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+P+ VS +K R++ + + V P E A A G + D+ A
Sbjct: 174 HQVPLVVSSVSASKMRKLPRNLHGVEWLVCQPEE------AEAYLGLEL--KDDQQILDA 225
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V++ G++ VL S++
Sbjct: 226 ARVFHKL----------GVQNVIIICGAERVLFASQD 252
>gi|310641906|ref|YP_003946664.1| carbohydrate kinase, pfkb family protein [Paenibacillus polymyxa
SC2]
gi|309246856|gb|ADO56423.1| Carbohydrate kinase, PfkB family protein [Paenibacillus polymyxa
SC2]
Length = 347
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 22/217 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E S ++ ++ + + T V +
Sbjct: 55 GGVARNVAENLGRLSRRVSLLTAVGDDAEGEFIIEQ-SSRYMNVIPLQVKGESSTGVYTA 113
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ +GE+ A A +E ++ + P I + I I+S+ ++++D N S +AA+ + E
Sbjct: 114 LLNEHGEMIVATAEMEIYDQ-IRPSIIFENIPLIASSRLVLLDTNFSMNVIAATIHVCLE 172
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+P+ VS +K R++ + + V P E A A G + D+ A
Sbjct: 173 HQVPLVVSSVSASKMRKLPRNLHGVEWLVCQPEE------AEAYLGLEL--KDDQQILDA 224
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V++ G++ VL S++
Sbjct: 225 ARVFHKL----------GVQNVIIICGAERVLFASQD 251
>gi|293395370|ref|ZP_06639654.1| ribokinase [Serratia odorifera DSM 4582]
gi|291422054|gb|EFE95299.1| ribokinase [Serratia odorifera DSM 4582]
Length = 401
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 67/300 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT-AVVS 64
GG N A+ S+ G+K + +S +G D L+H S+ + + + + ++ T + +
Sbjct: 133 GGKGANQAQAASRAGAKVHFVSKVGKDQFSQFALDHLSSSDIYSFKLYQSEEEPTGSAII 192
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ NGE A+ S K ++ I + + ASVL++ + A + K+A
Sbjct: 193 YVSQENGENMIAIYS--GANKNISEKEIAELKEELEDASVLLLQLENNFSATLNAMKLAK 250
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ V P S I ++Y+ V++PNE E A+ LSG +
Sbjct: 251 ALGVKVIMNPAPY--SADIIPALEYMDVITPNETE----ASLLSGIEV------------ 292
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+ ++ + A + E G R +++T+GS G LL +
Sbjct: 293 TNLESARRAATAIAELGARCIIITMGSRGALLYENQ------------------------ 328
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
QF H PA PA + TGAGD G ASI+ G ++Q
Sbjct: 329 --------------------QF--QHIPAFPAISIDTTGAGDAFNGALAASIADGQSLVQ 366
>gi|153002155|ref|YP_001367836.1| ribokinase [Shewanella baltica OS185]
gi|151366773|gb|ABS09773.1| ribokinase [Shewanella baltica OS185]
Length = 303
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
LGG N A ++L GS+ I LG D G+ + + W G+STEGI + + T
Sbjct: 37 LGGKGANQAVACARLAKPGSRTDFICHLGQDSIGDDMRQSWIKDGISTEGISQIAEQSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE VA+ L+PD + S A L+ +A + +
Sbjct: 97 TAMIFIGDNGENTIGVAA--GANATLSPDDLEHHYTLFSRAQFLLTQLETPAATVAKALQ 154
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + P T + +K++ +++PNE E A AL+G + +D +
Sbjct: 155 MAKNLGVTTVLNPAPATALGQ--DCLKWVDIITPNETE----AEALTGVEI-NHLDDAQM 207
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+A+ L Q +G+ +VV+TLGS G + S
Sbjct: 208 AAQLLHQ-----------QGVGIVVITLGSRGAYISS 233
>gi|168182496|ref|ZP_02617160.1| ribokinase [Clostridium botulinum Bf]
gi|237794904|ref|YP_002862456.1| ribokinase [Clostridium botulinum Ba4 str. 657]
gi|182674362|gb|EDT86323.1| ribokinase [Clostridium botulinum Bf]
gi|229260823|gb|ACQ51856.1| ribokinase [Clostridium botulinum Ba4 str. 657]
Length = 303
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L S M+S +G D+ G ++++K+ G++T+ + QK+ + V
Sbjct: 37 GGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGVNTDFVTVQKNQASGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K L+P I + S++++ + + + A +
Sbjct: 97 FVD--KESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P TK V K V PNE EL + N +P++
Sbjct: 155 NNIPVLLNPAPATKELDFNYVYKCDFFV-PNETELEILTN--------KPVNT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+K A ++ +KG++ V++T+GS G+L +K+
Sbjct: 199 -IGEIKEAAHLIGDKGVKNVIVTMGSKGLLWINKD 232
>gi|217974734|ref|YP_002359485.1| ribokinase [Shewanella baltica OS223]
gi|217499869|gb|ACK48062.1| ribokinase [Shewanella baltica OS223]
Length = 303
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
LGG N A ++L GS+ I LG D G+ + + W G+STEGI + + T
Sbjct: 37 LGGKGANQAVACARLAKPGSRTDFICHLGQDSIGDDMRQSWIKDGISTEGISQVAEQSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE VA+ L+PD + S A L+ +A + +
Sbjct: 97 TAMIFIGDNGENTIGVAA--GANATLSPDDLENHYALFSRAQFLLTQLETPAATVAKALQ 154
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + P T + +K++ +++PNE E A AL+G + +D +
Sbjct: 155 MAKNLGVTTVLNPAPATALGQ--DCLKWVDIITPNETE----AEALTGVEI-NHLDDAQM 207
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+A+ L Q +G+ +VV+TLGS G + S
Sbjct: 208 AAQLLHQ-----------QGVGIVVITLGSRGAYISS 233
>gi|420156408|ref|ZP_14663251.1| phosphomethylpyrimidine kinase [Clostridium sp. MSTE9]
gi|394757706|gb|EJF40723.1| phosphomethylpyrimidine kinase [Clostridium sp. MSTE9]
Length = 374
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ ++ + +I+ALG D L +SAG+ T+
Sbjct: 94 GGVGRNIAQNLAMFDVEVKLITALGEDAYAAELAGSCRSAGIDITESLTVPGGSTSTYVF 153
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I + +G++ A++ ++ I LTP ++ + IS+A++ ++D NL+ + IA
Sbjct: 154 ITNEHGDMELAISDMQ-IYDNLTPQYLERRADLISNAALCVIDTNLTAETIR---YIAET 209
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
++P++ +PVS K+ +++ ++ I + PN E A LSG + ++HS
Sbjct: 210 FHVPLFCDPVSTAKAGKLSGLLGKIHTLKPNLLE----AELLSGVKI-----HDEHS--- 257
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L+ A LL+ G+ V +++G +GV + E
Sbjct: 258 ----LEQAANALLQTGLSQVFISMGQNGVYCANHE 288
>gi|416305769|ref|ZP_11654355.1| Pseudouridine kinase [Shigella flexneri CDC 796-83]
gi|417682761|ref|ZP_12332114.1| hypothetical protein SB359474_2510 [Shigella boydii 3594-74]
gi|420326218|ref|ZP_14827970.1| pseudouridine kinase [Shigella flexneri CCH060]
gi|420351643|ref|ZP_14852827.1| pseudouridine kinase [Shigella boydii 4444-74]
gi|421683218|ref|ZP_16123014.1| pseudouridine kinase [Shigella flexneri 1485-80]
gi|320182898|gb|EFW57771.1| Pseudouridine kinase [Shigella flexneri CDC 796-83]
gi|332093445|gb|EGI98503.1| hypothetical protein SB359474_2510 [Shigella boydii 3594-74]
gi|391250721|gb|EIQ09941.1| pseudouridine kinase [Shigella flexneri CCH060]
gi|391287370|gb|EIQ45900.1| pseudouridine kinase [Shigella boydii 4444-74]
gi|404339072|gb|EJZ65512.1| pseudouridine kinase [Shigella flexneri 1485-80]
Length = 262
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 19 LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78
LG+K +++SA+G D G LL +G+ + +T+ ++LD GE+ A+
Sbjct: 2 LGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAIN 61
Query: 79 SVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT 138
+ +I +T +++ Q I A V++ D N+S ALA AA N+PV+ +PVS
Sbjct: 62 DM-NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAA--NVPVFVDPVSAW 118
Query: 139 KSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRNKHSAESLFQTLKPAILVL 197
K ++ + I + PN E ++ ALSG + H
Sbjct: 119 KCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFH---------------- 162
Query: 198 LEKGIRLVVLTLGSDGV 214
+ G+ +VL++G DGV
Sbjct: 163 -QHGLNRLVLSMGGDGV 178
>gi|443312867|ref|ZP_21042481.1| ribokinase [Synechocystis sp. PCC 7509]
gi|442777017|gb|ELR87296.1| ribokinase [Synechocystis sp. PCC 7509]
Length = 316
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 116/304 (38%), Gaps = 75/304 (24%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A M++LG YM+ +G D GN LLE +S G++TE + ++I + V
Sbjct: 41 GGKGANQAVAMARLGIDTYMVGRVGNDSFGNQLLETLQSVGVNTENVFIDENISSGVALI 100
Query: 66 ILDVNGE-----LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+D GE + A V+SI+ + I + + VL++ + P + +
Sbjct: 101 SVDDAGENQIIVIPGANGRVDSID-------VENLISLLPNCRVLLMQFEVPLPTILLAA 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A + V +P V K + + +++PN+ E+ ++ F ID
Sbjct: 154 QAAKRLGVKVILDPAPVLKDIP-AELYPLVDIITPNQTEIGSLVG-------FPVID--- 202
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
++ A +LL++G+ + LG GV+ +KE
Sbjct: 203 ------IESATKATHILLQRGVGCAIAKLGVKGVICTTKE-------------------- 236
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
FF PA P V AGD GG A+I GL
Sbjct: 237 -----------------------ETFFV---PAFPVETVDTVAAGDAFNGGLAAAIVEGL 270
Query: 301 DVMQ 304
+ Q
Sbjct: 271 PLRQ 274
>gi|163791416|ref|ZP_02185826.1| hypothetical protein CAT7_01270 [Carnobacterium sp. AT7]
gi|159873333|gb|EDP67427.1| hypothetical protein CAT7_01270 [Carnobacterium sp. AT7]
Length = 374
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 30/222 (13%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT---- 60
+GG ARNV E + +L K + S +G D+ G ++ H +E K +DT
Sbjct: 94 VGGAARNVGENLGRLEDKVMLFSVVGNDVEGKMIESH-------SEHFMNIKAVDTIEGC 146
Query: 61 --AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
++D NG++ +A V+ ++ +TP+W+ + + + + +++D N +
Sbjct: 147 PSGTFMEVIDKNGDMVLGLAEVDIFDR-MTPEWLNKHLSVLKRSKYIIIDLNCPKETIEF 205
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
A + NIPV VSV + + S + I V+ +E + ID
Sbjct: 206 INGYAIKYNIPVALLTVSVQRLVNLPSYLDGIRVIITKHNETATYFDM--------TIDT 257
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + L+ A+ L+KG+ VV++ GS V ++E
Sbjct: 258 D--------EDLRSAVKKWLDKGLENVVISKGSTKVAFGNQE 291
>gi|390604413|gb|EIN13804.1| indigoidine synthase A-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 748
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 149/347 (42%), Gaps = 67/347 (19%)
Query: 1 VNYVLGGVARNVAECMSKL--------GSKPYMISALGLDMAGNILLEHWKSAGLSTEGI 52
VN LGGVARN+AE ++ S +I +G D G ++ + + G+ T+
Sbjct: 382 VNISLGGVARNMAEAAHRVITSRAPQETSATALICGIGHDSFGRLIKDETQLLGMRTDAF 441
Query: 53 RRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ +AV + +LDV+G L + +A ++ E+ LT + + Q + + V+ +DANL+
Sbjct: 442 VQSDQSRSAVCNMLLDVHGGLMSGIADMDITEQ-LTGEQVLQELQRLRPC-VVALDANLA 499
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRI-----TSVVKY-------ITVVSPNEDEL 160
P L A + I EP SV KS RI TS+ + ++ SPN EL
Sbjct: 500 PSTLDAVIRYCQREGI-TCTEPTSVPKSTRILPGIATSLSRCAASGPSPVSFASPNLLEL 558
Query: 161 V---AMANALSGE-----------NMFRPIDRNKHSAESLFQ-------TLKPAILVLLE 199
V A A A S E + F+ + E L + + K + L+E
Sbjct: 559 VHLYAAARADSPELTSHNYWWDAVHSFKIGGEFRMDLEHLARRNVTEEDSSKGTLSFLVE 618
Query: 200 KGIRLVVLTL----GSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255
KGI + + + G + K ++ +MRI R + R + +
Sbjct: 619 KGIGQMAINMLPFFGGLVIKCGDKGIIVAMRI--RGRTAWSSER------------TNLA 664
Query: 256 GAMEPAGGSQFFAV--HFPAL---PASVVRLTGAGDCLVGGTLASIS 297
G A G V H P + P S+V +TG GD LVG LA ++
Sbjct: 665 GRYVVAHGDDSVVVLKHCPGIVVPPESIVNVTGCGDSLVGSLLADLA 711
>gi|375308603|ref|ZP_09773886.1| PfkB domain protein [Paenibacillus sp. Aloe-11]
gi|375079230|gb|EHS57455.1| PfkB domain protein [Paenibacillus sp. Aloe-11]
Length = 347
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNVAE + +L + +++A+G D G ++E + ++ ++ + + T V +
Sbjct: 55 GGVARNVAENLGRLSQQVSLLTAVGDDAEGEFIVEQSRLY-MNVIPLQVKGEPSTGVYTA 113
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD +GEL A A +E ++ + P I I I+++ ++ +D N +A++ +I E
Sbjct: 114 VLDEHGELVVATAEMEIYDQ-IRPSAILGNIPLITASRLVFLDTNFPMSVIASTIRICHE 172
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ VS +K R+ + + + N E A A G M D+ A
Sbjct: 173 HRVPLVISSVSASKMSRLPRNLHGVDWMVCNHME----AEAYLG--MQFTDDQQLMDAAR 226
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F L G++ V+L G D VL S++
Sbjct: 227 IFHQL----------GVQNVILFHGVDSVLFASQD 251
>gi|385304417|gb|EIF48435.1| hypothetical protein AWRI1499_1565 [Dekkera bruxellensis AWRI1499]
Length = 327
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 3 YVLGGVARNVA-ECMS----KLGSKPYMISAL-GLDMAGNILLEHWKSAGLSTEGIRRQK 56
+ +GGV NVA C S K + P ISA+ G D+ G+ +L+ G+S EG++ K
Sbjct: 111 HSIGGVGFNVALACSSSTRQKTKASPLFISAINGEDLTGSSILKRIGKLGISAEGLQNLK 170
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
D +TA +++ D G+L A A ++ IE I + H S +++D+N+ +
Sbjct: 171 DQNTAEYTSVHDETGKLIVACADMDIIEHLSEKXTIEKLQXH--KPSHILMDSNIPVKLM 228
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRI--TSVVKY----ITVVSPNEDELVAMANALSGE 170
+ K + + + + +EP S K+ ++ +V Y IT+++P +EL + +
Sbjct: 229 NSVLKYSKDNSXKLIYEPTSAXKAYKLGQAAVHSYPDNEITMITPTINELNTVFESFHEN 288
Query: 171 NMFRPID 177
F+ +D
Sbjct: 289 EKFQDLD 295
>gi|299535671|ref|ZP_07048992.1| putative sugar kinase yeiI [Lysinibacillus fusiformis ZC1]
gi|298728871|gb|EFI69425.1| putative sugar kinase yeiI [Lysinibacillus fusiformis ZC1]
Length = 363
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 18/216 (8%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ +GGV RN+AE + +L + +++ G D ++ E +S ++ + + + T
Sbjct: 90 FSVGGVGRNIAENLGRLNHQVTLLTTAGKDADWQVIQEASESF-MNLRYVEQLAEATTGS 148
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ I+D GEL+ AVA++E + L P +++ + +A ++D N +A ++
Sbjct: 149 YTAIMDEQGELSLAVANME-VYDLLLPSLLKKHETMLVNAGCFILDLNCPKETVAYIQQV 207
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A +IP+ PVS K R+ ++ +T N DE A + G I+ H
Sbjct: 208 AIARDIPLVIVPVSSPKMNRLPETLQGVTWFICNTDE----AETIVG----HKIENATHY 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
++L Q LL+ G V++T GS GV S
Sbjct: 260 EKALQQ--------LLQLGAEHVIITAGSKGVYAAS 287
>gi|331092242|ref|ZP_08341070.1| ribokinase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401674|gb|EGG81253.1| ribokinase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 288
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A + KLG K MI A+G D G L + +S G+ST G+ T
Sbjct: 27 GGKGANQAYAIGKLGGKVEMIGAVGDDSFGYKLKANLESVGVSTVGVETFSGEPTGQAYI 86
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D GE ++ + +T D I++ + I + ++++ + + K+A
Sbjct: 87 AVDEEGE--NSIILIAGTNGMVTKDMIKKNLKKIQESDIIIMQLEIPLEVVEYVKKLAVG 144
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V +P + S K I + PNE EL L+G+ M +N
Sbjct: 145 LGKTVIVDPAPAVPNIP-DSFWKGIDYIKPNETEL----EILAGKEM-----KN------ 188
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ LK ++LEKG++ VV+TLG DG L S E
Sbjct: 189 -LEQLKEGARIMLEKGVKNVVVTLGGDGCLFVSAE 222
>gi|384048492|ref|YP_005496509.1| Ribokinase [Bacillus megaterium WSH-002]
gi|345446183|gb|AEN91200.1| Ribokinase [Bacillus megaterium WSH-002]
Length = 292
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ MI +G D G +LE++KS G+S E ++ D D+
Sbjct: 36 VPGGKGANQAVAAARLGADVSMIGCVGEDHYGKAILENFKSNGVSVENVKPVTDSDSGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TPD++ + I A ++++ + + ++
Sbjct: 96 HIIL---AEGDNSIVVVKGANDHITPDYVEKAKEKIKEADIVLIQQEIPEETVEYVAQLC 152
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
E +P+ P + V++ ++ ++PNE E
Sbjct: 153 QELKVPLLLNPAPARPLK--AEVIEQVSYITPNEHE 186
>gi|126653973|ref|ZP_01725810.1| carbohydrate kinase, PfkB family protein [Bacillus sp. B14905]
gi|126589530|gb|EAZ83672.1| carbohydrate kinase, PfkB family protein [Bacillus sp. B14905]
Length = 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ +GGV RN+AE + +L + +++ G D ++ + +S ++ + + + T
Sbjct: 90 FSVGGVGRNIAENLGRLNHQVTLLTTAGKDADWQVIQDASESF-MNLRYVEQLPEASTGS 148
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ I+D GELA AVA++E + L P+ +++ + +A ++D N +A ++
Sbjct: 149 YTAIMDEQGELALAVANME-VYDLLLPNLLKKHETMLVNAGCFILDLNCPKETVAYIQQV 207
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A IP+ PVS K R+ ++ +T N DE A + G I+ H
Sbjct: 208 AIAREIPLVIVPVSSPKMNRLPETLQGVTWFICNTDE----AETIVGHT----IENVSHY 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSS 224
++L Q LL+ G V++T GS GV S + S
Sbjct: 260 EKALQQ--------LLQLGAEHVIITAGSKGVYAASTTIAPS 293
>gi|426223332|ref|XP_004005829.1| PREDICTED: ribokinase isoform 2 [Ovis aries]
Length = 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 55 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGAAS 114
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + + ++ L + +R+ I A V++ ++P + +IA
Sbjct: 115 IIVDSEGQNIIVIVAGANL--LLNTEDLREAASAIRRAKVMICQLEVTPATSLEALRIAH 172
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + P D K
Sbjct: 173 SNGVKTLFNPAPAIADLD-PEFYTLSDVFCCNESE----AEILTGLEVGSPTDAGK---- 223
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLLE+G ++V++TLG++G ++ S+
Sbjct: 224 --------AALVLLERGCQVVIITLGAEGCVMLSQ 250
>gi|320107461|ref|YP_004183051.1| ribokinase [Terriglobus saanensis SP1PR4]
gi|319925982|gb|ADV83057.1| ribokinase [Terriglobus saanensis SP1PR4]
Length = 306
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 115/300 (38%), Gaps = 67/300 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG MI +G D+ LL+ SAG+S + + + S
Sbjct: 39 GGKGANQAVGAARLGGNVVMIGRVGEDLFATQLLDELSSAGVSRHCV---ESVPGPSGSA 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ V ++ + L P + ++ + SAS+++ + P + ++A E
Sbjct: 96 VVMVTPAGDNSIVVIPGANDSLQPADLDLYLDELRSASLILSQLEIPLPTVERLAELARE 155
Query: 126 CNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+P +P +R + ++++ +T ++PNE E + L G F P +H
Sbjct: 156 FGVPFMLDP---APARELPPTLLRNVTWLTPNESETQILLQGLRGNPNFEPAVAAQH--- 209
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
LL+ G+R V+L +GS GV L +
Sbjct: 210 ------------LLDTGVRNVILKMGSRGVFLAGE------------------------- 232
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
AME + PA P VV T AGD GG +S G++ ++
Sbjct: 233 ------------AME--------TTYLPAFPVEVVDTTAAGDAFNGGFAYGLSDGMEPIE 272
>gi|456013574|gb|EMF47218.1| Pseudouridine kinase [Planococcus halocryophilus Or1]
Length = 364
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 22/213 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARNVAE + +LG+ ++S +G D L+E ++ +STE + + + T +
Sbjct: 92 VGGVARNVAENLGRLGNSVKLLSIVGNDPEWE-LIEAASNSFMSTELTKAVEGLSTGTYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL+ +GE+ A+A ++ I F+TP ++ + + SA+ L++D N + K+A
Sbjct: 151 AILEPDGEMILAMADMK-IYDFMTPAYLSKNDSALLSAAFLVIDLNCPRETVEYVRKLAL 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
IP+ PVS K ++ + ++ + N DE +K+
Sbjct: 210 ANEIPLAVIPVSAPKMNHLSEDLSGVSWLILNRDE------------------ASKYLEM 251
Query: 185 SLFQTLK--PAILVLLEKGIRLVVLTLGSDGVL 215
S+ T + AI LL++G VV+T G DG +
Sbjct: 252 SIETTEEWHLAIQRLLDRGAESVVITGGKDGAI 284
>gi|300935085|ref|ZP_07150116.1| kinase, PfkB family [Escherichia coli MS 21-1]
gi|300459666|gb|EFK23159.1| kinase, PfkB family [Escherichia coli MS 21-1]
Length = 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G + LE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMPLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +++ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLDQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNA-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>gi|169829354|ref|YP_001699512.1| sugar kinase yeiI [Lysinibacillus sphaericus C3-41]
gi|168993842|gb|ACA41382.1| Hypothetical sugar kinase yeiI [Lysinibacillus sphaericus C3-41]
Length = 364
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 18/222 (8%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ +GGV RN+AE + +L + +++ G D ++ + +S ++ + + + T
Sbjct: 90 FSVGGVGRNIAENLGRLNHQVTLLTTAGKDADWQVIQDASESF-MNLRYVEQIPEASTGS 148
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ I+D GELA AVA++E + L P+ +++ + +A ++D N +A ++
Sbjct: 149 YTAIMDEQGELALAVANME-VYDLLLPNLLKKHETMLVNAGCFILDLNCPKETVAYIQQV 207
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A IP+ PVS K R+ ++ +T N DE A + G I+ H
Sbjct: 208 AIAREIPLVIVPVSSPKMNRLPETLQGVTWFICNTDE----AETIVGHT----IENVSHY 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSS 224
++L Q LL+ G V++T GS GV S + S
Sbjct: 260 EKALQQ--------LLQLGAEHVIITAGSKGVYAASTTIAPS 293
>gi|145297941|ref|YP_001140782.1| carbohydrate kinase [Aeromonas salmonicida subsp. salmonicida A449]
gi|418361858|ref|ZP_12962505.1| carbohydrate kinase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850713|gb|ABO89034.1| carbohydrate kinase, PfkB family [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356686974|gb|EHI51564.1| carbohydrate kinase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 363
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ +++A+G D G+ LLE + AG+ + + T+ +
Sbjct: 93 GGVGRNIAENLARLGTDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQVLVLEGQATSCYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + I++ LTP + + +A + ++D NL+ L + E
Sbjct: 153 LHDGSGEMSCAVNDMAIIDQ-LTPARLTPLTGFLGAARLWVLDTNLATHTLDWLFERQGE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I ++ PN E A L G + P
Sbjct: 212 HIIFV--DTVSVAKVEKIRPWLHRIHILKPNRSE----AEQLCGFTIAGP---------- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T A G++ + L+LG G+ E
Sbjct: 256 --DTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGE 288
>gi|424827421|ref|ZP_18252230.1| ribokinase [Clostridium sporogenes PA 3679]
gi|365980344|gb|EHN16380.1| ribokinase [Clostridium sporogenes PA 3679]
Length = 294
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L S M+S +G D+ G ++ K+ G++T+ + +KD + V
Sbjct: 28 GGKGANQAVVAARLKSDVMMVSKVGDDLFGQNTTKNLKTNGVNTDFVTVEKDQASGVAPI 87
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K L+P I + S++++ + + + A +
Sbjct: 88 FVD--KESKNSILIIKGANKSLSPKDIDDASEELKKCSLIILQLEIQLETVYYAIDFANK 145
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P TK V K V PNE EL + N +P++
Sbjct: 146 NNIPVLLNPAPATKKLDFHYVYKCDFFV-PNETELEILTN--------KPVNT------- 189
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +K A ++ +KG++ V++T+GS G+L +K+
Sbjct: 190 -IEDIKEAAHLIGDKGVKNVIVTMGSKGLLWINKD 223
>gi|156743165|ref|YP_001433294.1| ribokinase-like domain-containing protein [Roseiflexus castenholzii
DSM 13941]
gi|156234493|gb|ABU59276.1| PfkB domain protein [Roseiflexus castenholzii DSM 13941]
Length = 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG ARNVAE +++LG +++ + D G +++ AG++T+ + R D +
Sbjct: 44 VGGCARNVAENLARLGYPTTLVTVVCDDDFGQAIVQQTARAGVNTDHVIRVCDHHSPAYV 103
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L G+L V E++ LTP I A ++++DAN+ + I A
Sbjct: 104 ALLSPEGQLITGVDDTEAVAA-LTPAVITSHRALFQRAPMVVMDANVPVESAKTLLDICA 162
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
++PV +PV+ + R + ++V+PN E A AL+G ++ A+
Sbjct: 163 AADVPVALDPVAYAPALRYRPFIGSFSLVTPNAIE----AEALTGIHV-------TDVAQ 211
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
++ + L +G+ + ++TL G++
Sbjct: 212 AILAARR-----LTAEGVEIAIVTLAEQGLV 237
>gi|157823079|ref|NP_001102173.1| ribokinase [Rattus norvegicus]
gi|149050720|gb|EDM02893.1| ribokinase (predicted), isoform CRA_a [Rattus norvegicus]
Length = 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 52 FGGKGANQCVQAARLGAKAAMVCKVGNDSFGNNYIENLKQNHISTEFTYQTRDAATGTAS 111
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ H IS A V++ +SP A + +A
Sbjct: 112 II--VNNEGQNIIVIVAGANLLLNTEDLKKAAHVISRAKVMICQLEISPAASLEALTMAR 169
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P ++ R T TV NE E A L+G + P
Sbjct: 170 SSGVKTLFNPAPAIADLDPRFYT----LSTVFCCNESE----AEILTGHAVNDPT----- 216
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
T A LVLLE+G ++VV+TLG+ G + S+
Sbjct: 217 -------TAGTAALVLLERGCQVVVITLGASGCVTLSQ 247
>gi|395760997|ref|ZP_10441666.1| hypothetical protein JPAM2_04467 [Janthinobacterium lividum PAMC
25724]
Length = 385
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GGV RN+AE +++L +++ALG D AG+ L H + AG+ G + +
Sbjct: 93 VFGGVGRNIAENLARLSLPVALLTALGDDAAGHALQTHAEDAGIDMRGSLHLNNTSSGTY 152
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL---SPPALAASC 120
+ +LD +GE+ A+A+++ E+ LTP ++ ++A++ + D NL S AL A
Sbjct: 153 TAVLDEHGEMLLAMANMQLYEQ-LTPAFLHSRQPQRAAAALTVCDLNLGHDSVQALLADA 211
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL-VAMANALSGENMFRPIDRN 179
+ A P+ VS K + + + ++ N EL +A AL
Sbjct: 212 RQDATHATPLVIVAVSQPKMAHLPQDLTGLHLLILNRGELETRVARALP----------- 260
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ F ++ A + +G R V++T GS+GV
Sbjct: 261 -----TAFD-VRAACREVQRQGARQVIVTCGSEGV 289
>gi|381207177|ref|ZP_09914248.1| ribokinase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 309
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 21/217 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A + G++ I+ LG D I L+ + + G++T+ + R + DT
Sbjct: 38 GGKGSNQAVAAKRAGAEVSFIAMLGEDAFAKIALDLYSTEGVNTDYVFRTHEQDTGAADI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D + A+ V L P+ + Q I+ ASV M + +S P++ +IA
Sbjct: 98 IID-DATGNNAIIVVIGAAGLLGPEHVEQATSRIAEASVFMTNFEVSSPSVKRGLEIARA 156
Query: 126 CNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+IP P T+ I ++ Y T PNE E A++ +G + D K
Sbjct: 157 HSIPTILNPAPATEVPLEIFALADYAT---PNETE----ASSFTGIQVTDATDARK---- 205
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
A L L E G+ ++TLG G + + +L
Sbjct: 206 --------AALKLREMGVGTALITLGEQGCYVLNDDL 234
>gi|170757336|ref|YP_001781200.1| ribokinase [Clostridium botulinum B1 str. Okra]
gi|169122548|gb|ACA46384.1| ribokinase [Clostridium botulinum B1 str. Okra]
Length = 303
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++L S M+S +G D+ G ++++K+ G++T+ + QK+ + V
Sbjct: 36 FGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGINTDFVTVQKNQASGVAP 95
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D E ++ ++ K L+P I + S++++ + + + A
Sbjct: 96 IFVD--KESKNSILIIKGANKNLSPTDIDDASKELKKCSLIILQLEIELETVYYAIDFAN 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ NIPV P TK V K V PNE EL + N +P++
Sbjct: 154 KNNIPVLLNPAPATKELDFDYVYKCDFFV-PNETELEILTN--------KPVNT------ 198
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+K A ++ +KG++ V++T+G+ G+L +K+
Sbjct: 199 --IGKIKEAAHLIGDKGVKNVIVTMGNRGLLWINKD 232
>gi|164661948|ref|XP_001732096.1| hypothetical protein MGL_0689 [Malassezia globosa CBS 7966]
gi|159105998|gb|EDP44882.1| hypothetical protein MGL_0689 [Malassezia globosa CBS 7966]
Length = 664
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 6 GGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAG-LSTEGIRRQKDIDTA 61
GGVA NVA L +++ + D+ G +LL+ + + T+ + TA
Sbjct: 360 GGVAHNVARATHALIKDKQAVVLVAPMANDVFGKVLLQDMLTVSCMRTDAL--APSSHTA 417
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ + +L +GEL +A +E +EK LTP + + + + DANLSP +LAA
Sbjct: 418 ICNLLLGAHGELIHGIADMEVVEKSLTPQVVTEKLRQYRP-QFIAADANLSPASLAAILL 476
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVK------YITVVSPNEDELVAMA 164
A I +EP SV K RI ++ + +++PN+ EL MA
Sbjct: 477 HAKSERITYLYEPTSVKKCERIIEAMQILQQMHMVPIMTPNQYELARMA 525
>gi|308234231|ref|ZP_07664968.1| PfkB domain protein [Atopobium vaginae DSM 15829]
gi|328943513|ref|ZP_08240978.1| hypothetical protein HMPREF0091_10203 [Atopobium vaginae DSM 15829]
gi|327491482|gb|EGF23256.1| hypothetical protein HMPREF0091_10203 [Atopobium vaginae DSM 15829]
Length = 691
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG N A ++KL K +I +G D +++ + + T+G+ R KD T
Sbjct: 400 VGGKGLNYAIGVAKLAHKAVLIGNIGDDSESSMIYKELSRWNIDTKGVVRTKDEQTGKAY 459
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D G A+ + + L I + H +AS+ ++ + + A +CK A
Sbjct: 460 ICVDKQG--ASTITILTGANSKLCAQDIIERKHLFKNASLCLIPSEVPLDAAEQACKEAK 517
Query: 125 ECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
V F+PV++T+ +R+ + + YI PNE EL A+ AL R+ SA
Sbjct: 518 RQGAQVIFKPVALTEFPKRMAAYIDYII---PNEHELAALCYALKNCAQAHTPHRDDRSA 574
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
+ L +LL GI V++T G G
Sbjct: 575 KKAQNALIDHAHMLLNLGIPHVIVTRGEKG 604
>gi|344280451|ref|XP_003411997.1| PREDICTED: ribokinase-like [Loxodonta africana]
Length = 322
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 41/274 (14%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDHIENLKRNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIIIVAGANLLLNSEDLKEAASVISRAKVMICQLEVTPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + P D K
Sbjct: 169 TSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGVTVCSPADAGK-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
A LVL+E+G ++V++TLG+DG ++ L +T+P
Sbjct: 220 ----------AALVLMERGCQVVIITLGADGCVM------------LSRTEPIP-----K 252
Query: 243 KTVTSRCHSSRYSGAMEP-AGGSQFFAVHFPALP 275
VT + + +GA + G F+ ++P LP
Sbjct: 253 HIVTEKVKAVDTTGAGDSFVGALAFYLAYYPDLP 286
>gi|317142923|ref|XP_001819191.2| IdgA domain protein [Aspergillus oryzae RIB40]
Length = 768
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 136/337 (40%), Gaps = 57/337 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ LGGV NVA LGS S +G D++G L ++ GLST G++ ++
Sbjct: 430 ITQSLGGVGHNVAIATKYLGSSVLFCSVVGDDLSGRAALTALRTEGLSTAGVQVLPASNS 489
Query: 61 AVVSNILDVNG---ELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
A + + VN +L A+A +E E+ L + + + + ++VD+N SP
Sbjct: 490 ARTAQYVAVNDAKKDLVMAMADMGIMELPEQKLDFEGFWETLLSRTKPQWVIVDSNWSPE 549
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSPNEDE 159
L +A + V FEPVS KS R+ S I++ +PN+ E
Sbjct: 550 VLTKWVAVAKKHGARVAFEPVSNAKSCRLFSKSAEVNAAISPSASVPNNAISLATPNQFE 609
Query: 160 LVAMANALSGENMFRPIDRNKHSAESLFQTLK----PAILVLLEKGIRLVVLTLGSDGVL 215
L M A +F +E + + P + L I ++ LGS GVL
Sbjct: 610 LTTMYMAARDSGLF--------DSEGWWHIIDAMGIPQQNIQLLPYIPCLITKLGSQGVL 661
Query: 216 LCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
+ R+ + PY SR A E GG + FP P
Sbjct: 662 VTQLLRPGDPRLTSPDSAPYILSRAAL--------------ADELVGG--VYMRLFP--P 703
Query: 276 ASV------VRLTGAGDCLVGGTLASISSGLDVMQSV 306
A+V V + GAGD L+G ++ + G ++ V
Sbjct: 704 AAVLADEEIVSVNGAGDTLLGAVISGLVKGAKTVEDV 740
>gi|345323270|ref|XP_001509303.2| PREDICTED: ribokinase-like [Ornithorhynchus anatinus]
Length = 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG++ M+ +G D GN LE++K G+STE + KD T S
Sbjct: 78 FGGKGANQCVQAARLGAETSMVCKVGKDSFGNDYLENFKQNGISTEFAHQTKDASTGTAS 137
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
IL VN E + V L +++ IS A V++ ++P + K+A
Sbjct: 138 -IL-VNNEGQNVIVIVAGANLLLDFQDLKKAADVISKAKVMVCQLEIAPATSLEALKMAR 195
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E L+G + P D K +
Sbjct: 196 ASGVKTLFNPAPAIADLD-PQFYTLSDVFCCNETE----TEILTGLQVGSPTDAGKAGS- 249
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
VLLE+G R+V++T+G++G +L S E
Sbjct: 250 -----------VLLERGCRVVIITMGAEGCVLVSGE 274
>gi|432685993|ref|ZP_19921291.1| pyrimidine kinase [Escherichia coli KTE156]
gi|431222166|gb|ELF19457.1| pyrimidine kinase [Escherichia coli KTE156]
Length = 268
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 8 VARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNIL 67
+ RN+A ++ LG +++S +G D G +LLE + AG++ G R T+ I
Sbjct: 1 MGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIA 60
Query: 68 DVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ + + A+ +E+ LTP + R + H A V++ D NL+ AL +A
Sbjct: 61 NRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTLAD 116
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 117 E--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT---- 166
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 167 --------AVNALHQQGVQQLFVYLPDESVYCSEKD 194
>gi|117619101|ref|YP_857895.1| PfkB family kinase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117560508|gb|ABK37456.1| kinase, pfkB family [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 311
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ ++SA+G D G+ LL+ + AG+ + T+ +
Sbjct: 41 GGVGRNIAENLARLGTDTRLLSAVGNDQYGHHLLDVTQRAGVDVRQVLMLDGQATSCYLS 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + IE+ LTP + + +A + ++D NL+ L + E
Sbjct: 101 LHDGSGEMSCAVNDMAIIEQ-LTPARLTPLSGFLGAARLWVLDTNLATHTLDWLFERQGE 159
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I + PN E A L G + P
Sbjct: 160 HIIFV--DTVSVAKVEKIRPWLHRIHTLKPNRSE----AEQLCGFTIAGP---------- 203
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T A G++ + L+LG G+ E
Sbjct: 204 --DTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGE 236
>gi|81427866|ref|YP_394865.1| transcriptional regulator [Lactobacillus sakei subsp. sakei 23K]
gi|78609507|emb|CAI54553.1| Putative transcriptional regulator with a sugar kinase domain, GntR
family [Lactobacillus sakei subsp. sakei 23K]
Length = 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + LGG N+A ++KL Y I+ G D+ G E + L+ + ++ D T
Sbjct: 88 ITFSLGGAGYNIAHNLTKLAVPNYFITVYGDDLNGQKFEEDAQKNHLAIQHSKKIPDKST 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + D +G L V + I +TPD++ + + I++++ ++D NL +
Sbjct: 148 SSYLYVNDPDGTLNVGVDDM-GIYDDITPDFLSERLATINTSAYCIIDTNLPEKTIDW-- 204
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
+ C +P++ + VS+ KS ++ +V+ I + + EL + N+
Sbjct: 205 -LFDNCKVPIFVKTVSLNKSYKLQNVLSKIDTLMTTDKELAMLTNS 249
>gi|390331511|ref|XP_782814.3| PREDICTED: pseudouridine-metabolizing bifunctional protein
C1861.05-like [Strongylocentrotus purpuratus]
Length = 565
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A+ +++LG+ P +SA+G D AG L + S +R D++TA
Sbjct: 403 GGVGRNLADALTRLGASPVFLSAIGNDFAGQALRSNCSHMDFSRVSLR--DDVNTASYCL 460
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL 111
+LD GE+ + ++ I + +TP++I Q I A ++ +D N+
Sbjct: 461 VLDKKGEVVLGIGDMD-INETITPEYISQHASVIQEAPIVCMDGNI 505
>gi|163815865|ref|ZP_02207235.1| hypothetical protein COPEUT_02044 [Coprococcus eutactus ATCC 27759]
gi|158448675|gb|EDP25670.1| kinase, PfkB family [Coprococcus eutactus ATCC 27759]
Length = 321
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N+ K G K I +G DM GN L+E K AG+ T+GI + T +
Sbjct: 35 GGAPVNMLTAAGKAGLKTAFIGKVGDDMHGNFLIETAKQAGIETKGIVVDDTVFTTLAFV 94
Query: 66 ILDVNGELAAAVASVESIE-----KFLTPDWIRQF-IHHISSASVLMVDANLSPPALAAS 119
LD NGE + A + K + + IR + HI S S+ A +
Sbjct: 95 TLDENGEREFSFARKPGADTMLCYKEIDTELIRDTKVFHIGSLSLTDEPARTTTFQAVKE 154
Query: 120 CK-----IAAECNI--PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
K I+ + N P+W + + R+ S++ ++ ++ +++E ++
Sbjct: 155 AKKYGAVISYDPNYRAPLWDSRENAME--RMKSILPFVDIMKLSDEET----------SL 202
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
P + +AE LL G+RLV +TLGS+GVL+CS++
Sbjct: 203 LTPFADPEEAAE-----------YLLGSGVRLVAVTLGSEGVLICSRD 239
>gi|408672219|ref|YP_006871967.1| ribokinase [Emticicia oligotrophica DSM 17448]
gi|387853843|gb|AFK01940.1| ribokinase [Emticicia oligotrophica DSM 17448]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KLG+ +S +G D+ G ++ ++ G++T + + + V
Sbjct: 39 GGKGANQAVAAAKLGANVTFVSKVGDDIFGKQAIQGFQKEGINTNFVFTDAENPSGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D GE + AVAS L + + I IS+ ++++ + P + + K +E
Sbjct: 99 LVDAKGENSIAVAS--GANGNLQISEVAKAIEQISANDIVLLQLEIPIPTVEFAIKKCSE 156
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V P K ++ K++ +++PNE E A L+G + ++ KH+AE
Sbjct: 157 NGAKVILNPAPAQKLNE--NIFKFLEIITPNETE----AELLTGIKV-TDLESAKHAAE- 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
VL +KG++ +++TLGS G L
Sbjct: 209 ----------VLHQKGVKNIIITLGSRGAYL 229
>gi|423195445|ref|ZP_17182028.1| hypothetical protein HMPREF1171_00060 [Aeromonas hydrophila SSU]
gi|404633220|gb|EKB29769.1| hypothetical protein HMPREF1171_00060 [Aeromonas hydrophila SSU]
Length = 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ +++A+G D G+ LLE + AG+ + T+ +
Sbjct: 93 GGVGRNIAENLARLGTDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQVLVLDGQATSCYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + I++ LTP + + +A + ++D NL+ L + E
Sbjct: 153 LHDGSGEMSCAVNDMGIIDQ-LTPARLAPLSGFLGAARLWLLDTNLATHTLDWLFERQGE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I + PN E A L G + P
Sbjct: 212 HTIFV--DTVSVAKVEKIRPWLHRIHTLKPNRSE----AEQLCGFTIAGP---------- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T A G++ + L+LG G+ E
Sbjct: 256 --DTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGE 288
>gi|384208442|ref|YP_005594162.1| carbohydrate kinase, pfkB family [Brachyspira intermedia PWS/A]
gi|343386092|gb|AEM21582.1| carbohydrate kinase, pfkB family [Brachyspira intermedia PWS/A]
Length = 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 136/321 (42%), Gaps = 77/321 (23%)
Query: 6 GGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+ +S +G K I+++G D+ G+IL + KS G+ I R T+ ++
Sbjct: 38 GGVERNIINNLSNIGLKNIKFITSIGNDIFGDILFNNIKSLGVDVSYIVRNGS-STSYIA 96
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ + ++ A++ ++++++ + +++ I +A + +DA ++ K
Sbjct: 97 -IMNNDRDMEIAMSDMDTLDENINIEYLDSIRDIIENAEFITMDAVMNRYIFEYIIK--- 152
Query: 125 ECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
N P + + VS+ KS I + K+I + N +E + +DR+ +
Sbjct: 153 --NFPNKKLLTDAVSIKKSEHIKGLEKHIYALKLNSNEASFL------------LDRDIN 198
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+ E K A+ + LEKG++ + +T G+ G+ C YG D+
Sbjct: 199 TIEEG----KEAVKIFLEKGVKEIYITFGALGI--C-----------------YGTYNDI 235
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
+ A + A ++V TGAGD + G + SI D
Sbjct: 236 NE------------------------AYYLKAPKVNIVNATGAGDAFMAGIVYSIFHDYD 271
Query: 302 VMQSVAVDDAKTVYAAANVLF 322
+ D K +AA +F
Sbjct: 272 L-------DYKVKFAAVMAMF 285
>gi|427384807|ref|ZP_18881312.1| ribokinase [Bacteroides oleiciplenus YIT 12058]
gi|425728068|gb|EKU90927.1| ribokinase [Bacteroides oleiciplenus YIT 12058]
Length = 302
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L Y I+ G D+ G +E ++ G+ E I + + V
Sbjct: 39 GGKGANQAVAAARLKGNVYFIAKTGNDLFGKRSIEQYEDEGIHVENIYSDPTLPSGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++DVNGE + AVAS L+P+ IR+ I +L++ + + + +IA+E
Sbjct: 99 MVDVNGENSIAVAS--GANGSLSPEDIRKAQPVIEKGDILLMQLEIPIETVEYAAQIASE 156
Query: 126 CNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P +R +++ +++ + ++ PNE E A LSG + D
Sbjct: 157 QGIKVILNP---APARALSNKLLQNLYMIIPNETE----AEILSG---IKVTD------- 199
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
+++ + A ++ KG+ +VV+T+GS G L+
Sbjct: 200 --WESARKAADIISAKGVDIVVITMGSKGALI 229
>gi|343521477|ref|ZP_08758445.1| carbohydrate kinase, PfkB family [Parvimonas sp. oral taxon 393
str. F0440]
gi|343396683|gb|EGV09220.1| carbohydrate kinase, PfkB family [Parvimonas sp. oral taxon 393
str. F0440]
Length = 372
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y GGVA+N+AE + K+G IS G D+ + ++ K GL + + +
Sbjct: 92 YSFGGVAKNIAENLLKMGIDNKFISVFGDDVYSREIKDYLKKIGLDFSNSKFLTNRGMSN 151
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ILD N +L A++S+E +++ + ++I + I I S +++D NL L CK
Sbjct: 152 YISILDENNDLFTAISSMEVLDE-INIEFISKLIDLIKSYKYIVMDTNLREDVLEYICK- 209
Query: 123 AAEC-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
C N + + VS K+ +I ++KYI ++ PN E + + P +
Sbjct: 210 --NCPNSKIIVDCVSRKKALKIKKLLKYIYLLKPNIYEAEELTDI--------P-----Y 254
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
ES L+ + V LEKG++ V +++G G+L K +RI +
Sbjct: 255 ENES---DLEKIVNVFLEKGVKKVFISMGEKGILYADKNENGIVRINEK 300
>gi|333374063|ref|ZP_08465952.1| ribokinase [Desmospora sp. 8437]
gi|332968346|gb|EGK07415.1| ribokinase [Desmospora sp. 8437]
Length = 312
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 126/319 (39%), Gaps = 72/319 (22%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++++ GG N A ++LG+ MI ++G D G LLE + +G+ T ++ T
Sbjct: 37 IHFIPGGKGANQAVAAARLGAHTEMIGSVGCDPFGQSLLESLQKSGVETTAVKTVSTAPT 96
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V S L G+ + V V P+ + I+ V+++ + + A+
Sbjct: 97 GVASIQLS-GGDNSIIV--VPGANSHCLPEDVEAGRERIAGVDVVLLQLEIPLETVMAAA 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
+ A E V P +R + + + V++PN EL LSG
Sbjct: 154 RTAKELGKKVVLNP---APARELPGELYRLADVITPNRSEL----ELLSG---------- 196
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSR 239
H A+ + L A+ VLL+KG+ VV TLG +G + S E GF R
Sbjct: 197 -HPAQE--EELAEAMQVLLDKGVGCVVTTLGEEGAAILSAE---------------GFRR 238
Query: 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
AVH P VV TGAGD G ++S G
Sbjct: 239 ---------------------------VAVH----PVDVVDTTGAGDAFNAGLACALSEG 267
Query: 300 LDVMQSVAVDDAKTVYAAA 318
L++ + AVD A V A A
Sbjct: 268 LELAE--AVDYAGRVAALA 284
>gi|381182313|ref|ZP_09891127.1| hypothetical protein KKC_03184 [Listeriaceae bacterium TTU M1-001]
gi|380317809|gb|EIA21114.1| hypothetical protein KKC_03184 [Listeriaceae bacterium TTU M1-001]
Length = 372
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE + +LG + +++A G D +++ ++ + + I T +
Sbjct: 100 GGVARNIAENLGRLGKEVVLLTACGTDADWEAIVQA-SDTYMNLDYVTAFPSISTGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +E+ E LTP +R+ ++ +S ++ D N LA A
Sbjct: 159 VLEGNGDLLVALADMEAYE-HLTPGALRKNESLLARSSAIVADLNCPKETLAYLGNFAET 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+P+ PVS K R+ ++ +T + N DE N I+ +
Sbjct: 218 SQVPLVLVPVSSPKMARLPEQLQQVTWLIANRDETETHFNM--------KIESD------ 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + A+ L++GI+ VV+T G G + +++
Sbjct: 264 --EDWRLAVKKWLDEGIQNVVITNGKHGAMAGNRD 296
>gi|294497689|ref|YP_003561389.1| ribokinase [Bacillus megaterium QM B1551]
gi|294347626|gb|ADE67955.1| ribokinase [Bacillus megaterium QM B1551]
Length = 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ MI +G D G +LE++KS G+S E ++ D+
Sbjct: 36 VPGGKGANQAVAAARLGADVSMIGCVGEDHYGKAILENFKSNGVSVENVKPVTGSDSGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ ++TPD++ + I A ++++ + + ++
Sbjct: 96 HIIL---AEGDNSIVVVKGANDYITPDYVEKAKEKIKEADIVLIQQEIPEETVEYVAQLC 152
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
E +P+ P + V++ ++ ++PNE E
Sbjct: 153 QELKVPLLLNPAPARPLK--AEVIEQVSYITPNEHE 186
>gi|225619842|ref|YP_002721099.1| PfkB family carbohydrate kinase [Brachyspira hyodysenteriae WA1]
gi|225214661|gb|ACN83395.1| carbohydrate kinase, pfkB family [Brachyspira hyodysenteriae WA1]
Length = 314
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 77/321 (23%)
Query: 6 GGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+ +S +G K I+++G D+ G+IL + KS G+ I R T+ ++
Sbjct: 38 GGVERNIINNLSNIGLKNIKFITSIGNDIFGDILFNNIKSLGVDVSYIVRNGS-STSYIA 96
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ + ++ A++ ++++++ + ++ I +A + +DA ++ K
Sbjct: 97 -IMNNDRDMEIAMSDMDTLDENINIKYLESIRDIIENAEFITMDAVMNRDIFEYIIK--- 152
Query: 125 ECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
N P + + VS+ KS I + K+I + N +E + +DR+ +
Sbjct: 153 --NFPNKKLLTDAVSIKKSEHIKGLEKHIYALKLNSNEASFL------------LDRDIN 198
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+ E K A+ + LEKG++ + +T G+ G+
Sbjct: 199 TIEEG----KEAVKIFLEKGVKEIYITFGALGI--------------------------- 227
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
C+ + Y+ E A + A ++V TGAGD + G + SI D
Sbjct: 228 -------CYGT-YNNINE--------AYYLKAPKVNIVNATGAGDAFMAGIVYSIFHDYD 271
Query: 302 VMQSVAVDDAKTVYAAANVLF 322
+ D K +AA +F
Sbjct: 272 L-------DYKVKFAAVMAMF 285
>gi|282882604|ref|ZP_06291223.1| PfkB family kinase [Peptoniphilus lacrimalis 315-B]
gi|281297579|gb|EFA90056.1| PfkB family kinase [Peptoniphilus lacrimalis 315-B]
Length = 355
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GGV RN+ +++LG K IS LG D +G+ + S + T I
Sbjct: 88 IKYSSGGVGRNICADLARLGIKTSFISVLGTDASGSFIKNELSSINVDTSNI-------- 139
Query: 61 AVVSN-------ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
+VS ILD + ++ A++ ++ ++K + D+++ + ISS+ + ++D NL
Sbjct: 140 LIVSGSTPHYLAILDDSKDMELAISDMDLVKK-IDKDFLQGKRNIISSSKLTILDTNLEE 198
Query: 114 PALAASCKIAAECNIPVWF--EPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
AL K NIP + + VS K ++ + + YI + NE E A AL+ E
Sbjct: 199 EALGYLFK-----NIPSKYLVDGVSTKKVVKLKNYLPYIYFLKVNEYE----AKALTDE- 248
Query: 172 MFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
K E + + LL KG+ + +TLGS G SK+
Sbjct: 249 --------KDDIEKIAEE-------LLNKGLNSLCITLGSKGAYYFSKK 282
>gi|334705681|ref|ZP_08521547.1| carbohydrate kinase [Aeromonas caviae Ae398]
Length = 363
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ +++A+G D G+ LLE + AG+ + + T+ +
Sbjct: 93 GGVGRNIAENLARLGTDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQVLVLEGQSTSCYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + IE+ LTP + + +A + ++D NL+ L + E
Sbjct: 153 LHDGSGEMSCAVNDMGIIEQ-LTPARLTPLSGFLGAARLWVLDTNLATHTLDWLFERQGE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I + PN E A L G + P
Sbjct: 212 HIIFV--DTVSVAKVEKIRPWLHRIHTLKPNRTE----AEQLCGFTIGGP---------- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
T A G++ + L+LG G+
Sbjct: 256 --DTWPMAAAWFHRAGVQRLFLSLGDQGIF 283
>gi|148379530|ref|YP_001254071.1| ribokinase [Clostridium botulinum A str. ATCC 3502]
gi|153933622|ref|YP_001383907.1| ribokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936999|ref|YP_001387455.1| ribokinase [Clostridium botulinum A str. Hall]
gi|148289014|emb|CAL83103.1| ribokinase [Clostridium botulinum A str. ATCC 3502]
gi|152929666|gb|ABS35166.1| ribokinase [Clostridium botulinum A str. ATCC 19397]
gi|152932913|gb|ABS38412.1| ribokinase [Clostridium botulinum A str. Hall]
Length = 303
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++L S M+S +G D+ G +++ K+ G++T+ + QK+ + V
Sbjct: 36 FGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNLKNNGVNTDFVTVQKNQASGVAP 95
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D E ++ ++ K L+P I + S++++ + + + A
Sbjct: 96 IFVD--RESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFAN 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ NIPV P TK V K V PNE EL + N +P++
Sbjct: 154 KNNIPVLLNPAPATKELDFDYVYKCDFFV-PNETELEILTN--------KPVNT------ 198
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+K A ++ +KG++ V++T+GS G+L +K+
Sbjct: 199 --IGKIKEAAHLIGDKGVKNVIVTMGSRGLLWINKD 232
>gi|365902228|ref|ZP_09440051.1| ribokinase [Lactobacillus malefermentans KCTC 3548]
Length = 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A S+LGS MI+A+G D G L++++ G+ T+ I K + V+
Sbjct: 37 FGGKGSNQAIAASRLGSDVAMITAVGADEFGQQQLDNYQENGIKTDMIIHGK--ANSGVA 94
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I V + V+ LTPD + QF I S+ ++++ + + +IA
Sbjct: 95 PIF-VEPTSGNRIIIVKGANDELTPDALDQFKSQIQSSKLIVLQQEIPLETNYRAIEIAR 153
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
N+PV P + +R + V++ +PNE EL + ++G P++
Sbjct: 154 AANVPVLLNPAPAVEGINREFVNQVQF---YAPNETEL----STITG----MPVES---- 198
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+K A L+++G+ +++T+GS GVL K+
Sbjct: 199 ----IDEIKAAAHKLIDEGVENLIVTIGSRGVLWVCKD 232
>gi|415682309|ref|ZP_11447625.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus CGS00]
gi|418898143|ref|ZP_13452213.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|315195409|gb|EFU25796.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus CGS00]
gi|377761178|gb|EHT85054.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIGC341D]
Length = 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFADMD-IYNLINNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDR 178
+ NIP+ P S+ K R I + I + N+ E A N +L+ ++ ++ I +
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWNVSLNTKSDYKKIKK 212
>gi|411008148|ref|ZP_11384477.1| carbohydrate kinase [Aeromonas aquariorum AAK1]
Length = 363
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ +++A+G D G+ LLE + AG+ + T+ +
Sbjct: 93 GGVGRNIAENLARLGTDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQVLVLDRQATSCYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + I++ LTP + + +A + ++D NL+ L + E
Sbjct: 153 LHDGSGEMSCAVNDMGIIDQ-LTPARLAPLSGFLGAARLWLLDTNLATHTLDWLFERQGE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I + PN E A L G + P
Sbjct: 212 HTIFV--DTVSVAKVEKIRPWLHRIHTLKPNRSE----AEQLCGLRIAGP---------- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T A G++ + L+LG G+ E
Sbjct: 256 --DTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGE 288
>gi|335048379|ref|ZP_08541399.1| carbohydrate kinase, PfkB family [Parvimonas sp. oral taxon 110
str. F0139]
gi|333758179|gb|EGL35737.1| carbohydrate kinase, PfkB family [Parvimonas sp. oral taxon 110
str. F0139]
Length = 372
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 21/229 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y GGVA+N+AE + K+G IS G D+ + ++ K GL + + +
Sbjct: 92 YSFGGVAKNIAENLLKMGIDNKFISVFGDDVYSREIKDYLKKIGLDFSNSKFLTNRGMSN 151
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ILD N +L A++S+E +++ + ++I + I I S +++D NL L CK
Sbjct: 152 YISILDENNDLFTAISSMEVLDE-INIEFISKLIDLIKSYKYIVMDTNLREDVLEYICK- 209
Query: 123 AAEC-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
C N + + VS K+ +I ++KYI ++ PN E + + P +
Sbjct: 210 --NCPNSKIIVDCVSRKKALKIKKLLKYIYLLKPNIYEAEELTDI--------P-----Y 254
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
ES L+ + V LEKG++ V +++G G+L K +RI +
Sbjct: 255 ENES---DLEKIVNVFLEKGVQKVFISMGEKGILYADKNENGIVRINEK 300
>gi|383815595|ref|ZP_09971006.1| ribokinase [Serratia sp. M24T3]
gi|383295627|gb|EIC83950.1| ribokinase [Serratia sp. M24T3]
Length = 309
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
N GG N A + G+ I+ +G D G + S + T I KD T
Sbjct: 36 NVAFGGKGANQAVAAGRSGADISFIACVGSDEIGERVRNQLASDNIDTRPIEAIKDTTTG 95
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
V ++ VN E + K LTP++++++ HI AS L++ ++ A+ +
Sbjct: 96 VA--LIFVNAEGENVIGIDAGANKSLTPEYLQRYQQHIVDASALLMQLESPLESVIAAAR 153
Query: 122 IAAECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
IA E N V P + + S+V IT PNE E A L+G + D +
Sbjct: 154 IAHENNTQVILNPAPACELPDELLSLVDMIT---PNETE----AEKLTGVKVSTADDAAR 206
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A +L +KGI V++TLGS GV L +
Sbjct: 207 ------------AAKMLHDKGIATVIITLGSKGVWLSQQ 233
>gi|225569351|ref|ZP_03778376.1| hypothetical protein CLOHYLEM_05433 [Clostridium hylemonae DSM
15053]
gi|225162150|gb|EEG74769.1| hypothetical protein CLOHYLEM_05433 [Clostridium hylemonae DSM
15053]
Length = 655
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 110/301 (36%), Gaps = 70/301 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A KLG Y I LG D G+I+ + S + TEGI D T+
Sbjct: 383 GGKGINQAIGAGKLGGFVYAIGRLGDDSEGHIISDTLSSYNIKTEGI--YIDNSTSTGKA 440
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + V S F + + + H +++ ++ LSP +A + K +
Sbjct: 441 FITVPDGSNSCVISYPGANAFFDVEQLNKCTHLLTNTDYCLISTELSPEVVAYAIKRCKK 500
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+ ++ +P + +K R +++ I + PNE EL E + + AE
Sbjct: 501 LNVKIFLKPATTSKIER--TLLSKIDYLVPNETEL---------EQLVPGPETIPEKAEE 549
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
LF+ K I+V T+G+ G L S E
Sbjct: 550 LFKLCKNTIIV-----------TMGAKGCYLKSSE------------------------- 573
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
++ FPA P S V TGA +C + S+ G D+ S
Sbjct: 574 ---------------------YSHFFPAAPFSPVDTTGAANCFISALAVSLGEGNDLPYS 612
Query: 306 V 306
+
Sbjct: 613 I 613
>gi|119944129|ref|YP_941809.1| ribokinase [Psychromonas ingrahamii 37]
gi|119862733|gb|ABM02210.1| ribokinase [Psychromonas ingrahamii 37]
Length = 308
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ LG D G + + +KS G++ +G+ +K+ T +
Sbjct: 38 GGKGANQAVAAARLGADVAFIACLGDDSFGINIRDAFKSDGINVDGVMIEKNTPTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ GE + +++ LTP+ I+ F IS+A +L++ + A+ + A
Sbjct: 98 QVSATGENSICISA--EANNHLTPERIKPFSSLISAAEILLMQLETPIETIQAAAETAKL 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V P ++K + +++PNE E A L+G + + + + +AE
Sbjct: 156 AGTVVVLNPAPAQSLSD--ELLKLVDIITPNETE----AEQLTGVQV-KDMPSAQQAAEK 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
L +KGI +V++TLGS+GV L
Sbjct: 209 LH-----------DKGIEMVMITLGSEGVWL 228
>gi|407769451|ref|ZP_11116826.1| hypothetical protein TH3_08204 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287373|gb|EKF12854.1| hypothetical protein TH3_08204 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 316
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV+RN+A + LG ++SA+G D G+ +++ G+ T IR+ TA +
Sbjct: 42 GGVSRNIAVHLRLLGCNVAILSAVGDDGDGDQIVQSLSELGIDTRQIRKIPGGHTAGYTA 101
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPA---LAASCKI 122
ILD GELA + E ++ LTPD++ + ++ MVD NL LA +
Sbjct: 102 ILDETGELALGLMDAEVYDR-LTPDFLAGQLGNLRCWPWWMVDVNLPMETLDWLADQKQT 160
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ C VS +K+ R+ V+ I ++ N E L+G + D K
Sbjct: 161 SKFCA-----ATVSPSKAARLKPVLGRIDLLIANRAE----TKVLTGIEINEISDAPK-- 209
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
A++ L + GI+ +V+TLG+ GV+
Sbjct: 210 ----------AVMALRQHGIKHMVITLGAMGVV 232
>gi|148658021|ref|YP_001278226.1| ribokinase-like domain-containing protein [Roseiflexus sp. RS-1]
gi|148570131|gb|ABQ92276.1| PfkB domain protein [Roseiflexus sp. RS-1]
Length = 314
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG ARNVAE +++LG +++ + D G +++ AG++T+ I R +
Sbjct: 44 VGGCARNVAENLARLGYPTTLVTVVCDDDFGQAIVQQTARAGVNTDHIIRVCTHHSPAYV 103
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L G+L V E++E LTP I A ++++DAN+ + I A
Sbjct: 104 ALLSPEGQLITGVDDTEAVEA-LTPAVITTHRALFQHAPMVVMDANVPVESAKTLLDICA 162
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG 169
++PV +PV+ + R + +V+PN E A ALSG
Sbjct: 163 AADVPVVLDPVAYEPALRYRPFIGSFFMVTPNAIE----AEALSG 203
>gi|406670543|ref|ZP_11077788.1| hypothetical protein HMPREF9706_00048 [Facklamia hominis CCUG
36813]
gi|405582059|gb|EKB56065.1| hypothetical protein HMPREF9706_00048 [Facklamia hominis CCUG
36813]
Length = 322
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 123/314 (39%), Gaps = 64/314 (20%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMA-GNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE + +L + ++S G D +I L LS I D +T+ +
Sbjct: 49 GGVGRNIAENLGRLNQQVSLLSIAGDDADYQSIYLASHSYMDLSH--IDLLPDHNTSSYT 106
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD GE+ A A + ++ K + WI++ +++A +++ D NL + A ++
Sbjct: 107 AVLDDQGEMTFAFADM-AVCKQMNDQWIQRHQDQLTTAEMVVADLNLQQSGIEALIELCR 165
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
IP+ PVS K + + ++ ++ + N+DE E+ F + H
Sbjct: 166 IKQIPLILIPVSGPKMAHMPTDLEGVSWLIVNQDE---------SESFFNHEVHSDHDLS 216
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
L Q+ L+ GI V+LT G L CSK++
Sbjct: 217 YLGQS-------WLDLGIEQVILTRGGRPCLYCSKKI----------------------- 246
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
GS F+ P VV +TGAGD G + IS + +
Sbjct: 247 ------------------GSIFYQ---PPQNPHVVDVTGAGDSFSAGLIYGISQSMPQEE 285
Query: 305 SVAVDDAKTVYAAA 318
+ A Y A
Sbjct: 286 CLKYAMANAYYTVA 299
>gi|299116399|emb|CBN74664.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 33/167 (19%)
Query: 5 LGGVARNVAECMSKL--------------------GSKPYMISALGLDMAGNILLEHWKS 44
GGV RNVAE ++++ G+ + S +G D G L+ +
Sbjct: 396 FGGVGRNVAEGVARVLLARRGDNVAMGIDSSSDGSGAVVTLASVVGADEPGKGLVAGCEE 455
Query: 45 AGLSTE---------GIRRQKDIDTAVVSN---ILDVNGELAAAVASVESIEKFLTPDWI 92
AG++ E G D A ++ +L +G+L AAVA + +E+ +T D++
Sbjct: 456 AGVNAEATVEVGCSSGAGDDGGSDKAGTASYVAVLGGDGDLVAAVADMRVLER-MTADFV 514
Query: 93 RQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTK 139
+ I ASV++ D NL P A + AE N+P+ FEP SV K
Sbjct: 515 ERHASIIDGASVVIADGNLPPEGFARVSGLCAERNVPLVFEPTSVAK 561
>gi|365843104|ref|ZP_09384061.1| HTH domain protein [Flavonifractor plautii ATCC 29863]
gi|373117904|ref|ZP_09532043.1| hypothetical protein HMPREF0995_02879 [Lachnospiraceae bacterium
7_1_58FAA]
gi|364573442|gb|EHM50940.1| HTH domain protein [Flavonifractor plautii ATCC 29863]
gi|371667825|gb|EHO32941.1| hypothetical protein HMPREF0995_02879 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 366
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 66/286 (23%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V LGGV RN+A M+ +G M++A G DM + G+ T
Sbjct: 88 VRMSLGGVGRNIAHNMALMGLDVRMLTAFGDDMNAQRIAASCGELGIDISQCLTVPGGAT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ I D +G++A AV+ +E I + +TP ++ + +A +L+VD N+ ++A
Sbjct: 148 STYLFITDGHGDMALAVSDME-IYEHVTPAFLAGRARLLQNAQLLVVDTNIPAQSIA--- 203
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A +P++ +PVS K+ ++ V+ + + PN E A LSG ++
Sbjct: 204 WLAENIRLPIFADPVSTAKAEKLRPVLGKLHTLKPNRLE----AELLSGVSI-------- 251
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
+ +L A LL G+R V ++LG DGV F+ D
Sbjct: 252 ----TDAASLNAAADALLATGLRRVFISLGGDGV----------------------FAAD 285
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGD 286
HS R VH P P +V TG GD
Sbjct: 286 ---------HSGR---------------VHVPCCPGEMVNTTGCGD 307
>gi|291241083|ref|XP_002740450.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 314
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 37/272 (13%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG K M+S +G D G+ ++++++ ++T + K+ T V
Sbjct: 43 FGGKGANQCVMAARLGVKVAMVSKVGDDSFGHDTIKNFQTNNVNTNHVSMTKEAATGVAP 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ VN E ++ V +T D + + + V++ +SP A+ K A
Sbjct: 103 --ITVNTEGQNSIVIVSGANMLITEDDAKSALSQMPDLKVVICQLEISPHTSLAAMKYAK 160
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E I F P + KY + PNE E L+G P+ N AE
Sbjct: 161 EKGILTIFNPAPAIPELD-SQFYKYADIFCPNETE----TELLTG----LPV-TNITEAE 210
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
A L LL+KG VV+TLG+ G ++ + E ++ I K K
Sbjct: 211 K-------AALALLDKGCSKVVITLGTQGSVVVTSETRKAIHIPTNKVK----------- 252
Query: 245 VTSRCHSSRYSGAMEPAGGS-QFFAVHFPALP 275
+ +GA + GS ++ H+PALP
Sbjct: 253 ------AIDTTGAGDAFIGSLAYYLAHYPALP 278
>gi|423200946|ref|ZP_17187526.1| hypothetical protein HMPREF1167_01109 [Aeromonas veronii AER39]
gi|404619098|gb|EKB16015.1| hypothetical protein HMPREF1167_01109 [Aeromonas veronii AER39]
Length = 363
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 119/304 (39%), Gaps = 71/304 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS +++A+G D G+ LLE + AG+ +R+ +D S
Sbjct: 93 GGVGRNIAENLARLGSDTRLLTAVGNDQYGHHLLEVSQRAGVD---VRQTLVLDGHTTSC 149
Query: 66 IL---DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
L D +GE++ A+ + IE+ LTP + + A + ++D NL+ L +
Sbjct: 150 YLSLHDGSGEMSCAINDMAIIEQ-LTPARLTPLAGFLGGARLWVLDTNLAIHTLDWLFER 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
E I V + VSV K +I + I + PN E A L G + P
Sbjct: 209 QGEQAIFV--DTVSVAKVEKIRPWLGKIHTLKPNRSE----AEQLCGMTIAGP------- 255
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
+T G++ + L+LG G+
Sbjct: 256 -----ETWPMVAAWFHRAGVKRLFLSLGEQGIF--------------------------- 283
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
YS + H P L + V+ +TG GD + G + LD+
Sbjct: 284 -----------YSDGEQQG--------HLPVLGSPVLNVTGGGDAFMAGLAHAWLQQLDI 324
Query: 303 MQSV 306
Q+
Sbjct: 325 AQTT 328
>gi|375090509|ref|ZP_09736823.1| hypothetical protein HMPREF9708_01213 [Facklamia languida CCUG
37842]
gi|374565270|gb|EHR36541.1| hypothetical protein HMPREF9708_01213 [Facklamia languida CCUG
37842]
Length = 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 122/311 (39%), Gaps = 62/311 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+AE + +LG M+S G D A L+ A + + +++ + T+ +
Sbjct: 101 LGGVGRNIAENLGRLGESVSMLSLAGYD-ADFDLIRRTTQAYVRLDHVQQLAECSTSSYT 159
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L+ GE+ A A + ++ + W+++ + A++++ D N A+ IA
Sbjct: 160 AVLNEQGEMEVAFADMAVCDR-MNGAWVQEHTAILQQAAMIVADLNPERSAIKQLIHIAK 218
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
IP+ PVS K + +K +T + N+DE R +++ S E
Sbjct: 219 THAIPLVIVPVSGPKMHHLPRNLKGVTWLIVNQDE------------SERFLEKTVQSEE 266
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
F L LE G+ VV+T G+ +L ++E
Sbjct: 267 D-FNELGQQ---WLELGVENVVITRGTRSILYANQE------------------------ 298
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
Q F P L VV +TGAGD G + ++ V Q
Sbjct: 299 --------------------QVFKHFQPKLSDHVVDVTGAGDSFSSGIIYGLNQDYPVDQ 338
Query: 305 SVAVDDAKTVY 315
+ + A + +
Sbjct: 339 CIQLGMANSYF 349
>gi|189464877|ref|ZP_03013662.1| hypothetical protein BACINT_01221 [Bacteroides intestinalis DSM
17393]
gi|189437151|gb|EDV06136.1| ribokinase [Bacteroides intestinalis DSM 17393]
Length = 302
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L + I+ G D+ G +E ++ G+ E I + + V
Sbjct: 39 GGKGANQAVAAARLKGNVHFIAKTGNDLFGKRSIEQYEDEGIHVENIYSDPTLPSGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D+NGE + A+AS L+P+ IR+ I +L++ + + + +IA+E
Sbjct: 99 MVDMNGENSIAIAS--GANGSLSPEDIRKAQPTIEKGDILLMQLEIPIETVEYAAQIASE 156
Query: 126 CNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P +R +++ +++ + ++ PNE E A LSG +
Sbjct: 157 QGIKVILNPAP---ARALSNKLLQNLYMIIPNETE----AEILSGVKV------------ 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +++ + A ++ KG+ +VV+TLGS G L+ K+
Sbjct: 198 TDWESARKAADIISAKGVDIVVITLGSKGALIKEKD 233
>gi|403668984|ref|ZP_10934218.1| ribokinase [Kurthia sp. JC8E]
Length = 300
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LGS M++ +G D+ G +E++K+ G+ TE I + T+ V+
Sbjct: 37 GGKGANQAVAAARLGSDVLMVTKVGNDLFGQNTIENFKNNGIRTEAI--EVGTKTSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ + ++ LTP + + + A ++++ + ++ + +A E
Sbjct: 95 IF-VDPHAKNRILIIQGANSELTPAMVESYKEQLKEAKLIILQLEIPLESIYKTIDVANE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IPV P + + V K T +PNE EL + N P+ +
Sbjct: 154 FDIPVLLNPAPANPALSMEYVQK-CTYFAPNESELGILTN--------MPV--------T 196
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ ++ A L+++G++ +++T+G GVL +++
Sbjct: 197 TVEEIQVAAQTLIDQGVQHLIVTMGEKGVLWMTEK 231
>gi|118444058|ref|YP_878670.1| ribokinase [Clostridium novyi NT]
gi|118134514|gb|ABK61558.1| ribokinase [Clostridium novyi NT]
Length = 310
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++ SK MI +G+D G IL+ K ++T+ I + K+I T +
Sbjct: 38 GGKGANQAIACARMNSKVSMIGKVGVDGNGQILVNKLKENNINTDYIFKDKEISTGMALI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D G + VAS ++ + D I + I ++ +++ + + K+A +
Sbjct: 98 TVDNEGNNSIIVASGANMT--IKEDEINKANEVIKNSDIVISQFEVPMKTILEGFKLAKK 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N P + + ++KY ++ PNE E A L+G D N
Sbjct: 156 HNKLTILNPAPAKEINK--ELLKYTDIIIPNETE----AYELTG---VEVTDLN------ 200
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ K A VLLE GI+ V++TLGS G + +KE
Sbjct: 201 ---SAKEASKVLLEDGIKCVIITLGSKGAAVITKE 232
>gi|358053479|ref|ZP_09147227.1| carbohydrate kinase [Staphylococcus simiae CCM 7213]
gi|357257033|gb|EHJ07342.1| carbohydrate kinase [Staphylococcus simiae CCM 7213]
Length = 372
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D + +++ S ++ + +++ ++ T +
Sbjct: 92 VGGVARNIAENLGRLGETVAFLSASGQDSEWD-MVKRLSSPFMNMDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+++ G++A +A +E + +TP+++ + H + A ++VD NLS AL C A
Sbjct: 151 ALINKQGDMAYGLADMEVFD-HITPEFLIKRTHLLKKAKCIIVDLNLSKDALDFLCAYTA 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+ +I + VS K + + + I + N+DE
Sbjct: 210 KHDINLVITTVSSPKMKNMPDSLHAIDWIITNKDE 244
>gi|415721952|ref|ZP_11468840.1| transcriptional regulator [Gardnerella vaginalis 00703Bmash]
gi|388060116|gb|EIK82815.1| transcriptional regulator [Gardnerella vaginalis 00703Bmash]
Length = 382
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGV RN+A + ++ ++ ++S G D G + GL ++ D T
Sbjct: 88 VRYALGGVGRNIAVALERMNTRASLVSVYGGDHNGELFKIDASVNGLDIGYSKQLPDAMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI ++TPD++R+ I I +A ++ +D N+S + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDYMTPDFLRERISIIENADIVALDTNISQKSFEWVC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV---AMANALSGENMFRPID 177
P+ ++ K+ RI S + I D LV A + AL+G +D
Sbjct: 207 D---NYKKPIMVRAITDAKAPRILSRLNCI-------DTLVLDTAESQALTG---ICAVD 253
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S Q K LL++G++ V + G +GV
Sbjct: 254 E-----RSAIQCAK----ALLKRGVKRVFVNSGREGV 281
>gi|395530184|ref|XP_003767178.1| PREDICTED: ribokinase [Sarcophilus harrisii]
Length = 356
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 34/271 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D G+ +E+ K G+STE + + K+ T S
Sbjct: 84 FGGKGANQCVQAARLGAKTSIVCKVGKDSFGSDYIENLKRNGISTEFMFQTKEASTGAAS 143
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L D +R+ IS A V++ +SP + +A
Sbjct: 144 II--VNNEGQNIIVIVAGANLLLNSDDLRKAADIISRAKVIICQLEISPATSLEALTMAH 201
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + F P T + NE E A L+G + P K +
Sbjct: 202 KSGVKTLFNPAPATADLD-AQFYTISDIFCCNESE----AEILTGLTISSPAAAGKAGS- 255
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
VL+E+G ++V++TLG++G + S E I +K + K
Sbjct: 256 -----------VLIERGCKIVIITLGAEGCVFVSAEEPGPKHIPTQK---------VIKP 295
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
V + + GA+ F+ ++P LP
Sbjct: 296 VDTTGAGDSFVGALA------FYLAYYPNLP 320
>gi|330828510|ref|YP_004391462.1| PfkB family carbohydrate kinase [Aeromonas veronii B565]
gi|423210805|ref|ZP_17197359.1| hypothetical protein HMPREF1169_02877 [Aeromonas veronii AER397]
gi|328803646|gb|AEB48845.1| Carbohydrate kinase, PfkB family [Aeromonas veronii B565]
gi|404615190|gb|EKB12163.1| hypothetical protein HMPREF1169_02877 [Aeromonas veronii AER397]
Length = 363
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS +++A+G D G+ LLE + AG+ +R+ +D S
Sbjct: 93 GGVGRNIAENLARLGSDTRLLTAVGNDQYGHHLLEVSQRAGVD---VRQTLVLDGHTTSC 149
Query: 66 IL---DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
L D +GE++ A+ + IE+ LTP + + A + ++D NL+ L +
Sbjct: 150 YLSLHDGSGEMSCAINDMAIIEQ-LTPARLTPLAGFLGGARLWVLDTNLAIHTLDWLFER 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
E I V + VSV K +I + I + PN E A L G + P
Sbjct: 209 QGEHAIFV--DTVSVAKVEKIRPWLGKIHTLKPNRSE----AEQLCGMTIAGP------- 255
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+T G++ + L+LG G+ E
Sbjct: 256 -----ETWPMVAAWFHRAGVKRLFLSLGEQGIFYSDGE 288
>gi|433462917|ref|ZP_20420487.1| ribokinase RbsK [Halobacillus sp. BAB-2008]
gi|432188232|gb|ELK45444.1| ribokinase RbsK [Halobacillus sp. BAB-2008]
Length = 296
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ YMI +G D G +L +++ G+ T+ + D T
Sbjct: 38 VPGGKGANQAVAAARLGADVYMIGCVGTDPYGEAVLANFRENGVHTDYVEPVTDARTGTA 97
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TPD++ + I + +LM+ + + +I+
Sbjct: 98 HIIL---AEGDNSIVVVKGANDHVTPDYVEKLIPFFQTCDLLMIQQEIPEETVETMAQIS 154
Query: 124 AECNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDELVAMANALSGENMFR 174
A+ +P+ P +R+I + V++ ++PNE E + + + E++ +
Sbjct: 155 ADIGVPLLLNPAP---ARQIPAEVIEQAAFLTPNEHEAAVLFDGGNPEDVTK 203
>gi|398396608|ref|XP_003851762.1| hypothetical protein MYCGRDRAFT_73377 [Zymoseptoria tritici IPO323]
gi|339471642|gb|EGP86738.1| hypothetical protein MYCGRDRAFT_73377 [Zymoseptoria tritici IPO323]
Length = 803
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 147/366 (40%), Gaps = 60/366 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI---RRQKDIDTA 61
LGGV NVA +GS + SA+G D+ G LE +AGLST GI TA
Sbjct: 438 LGGVGHNVAYAAHLMGSNVRLCSAVGSDLTGKAALEALTTAGLSTAGIATFSADSGARTA 497
Query: 62 VVSNILDVNGELAAAVASVESIE-KFLTPDWIRQFIHHI-------SSASVLMVDANLSP 113
I D + +L A+A + +E T I+ H S A+ +++D N
Sbjct: 498 QYIAINDAHKDLVVAMADMSILEIPSTTSSIIKTTFDHFWLPQLQTSRATHVVLDGNWPA 557
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKS----------RRITSVVKYITVVSPNEDELVAM 163
L + A N V FEPVS TKS T I + +PN EL +M
Sbjct: 558 EYLTLWLRAARTFNAQVLFEPVSTTKSTIPFQLTGEDTLSTFPTPSIHLSTPNIHELTSM 617
Query: 164 ------ANALSGENMFRPID---------RNKH---SAESLFQTLKPAILVLLEKGIRLV 205
A + E+ + ID R ++ +L P V L I +
Sbjct: 618 HAVARSAGLMDREDWWSVIDALGIPSTGARTAFAMATSSALVDQGVPQQAVQLLPFIPTL 677
Query: 206 VLTLGSDGVLLCSKELLSSM--RIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGG 263
+ LG++GVLL +LLS+ R+ + +PY + SRC +G + G
Sbjct: 678 LTKLGAEGVLLT--QLLSANDPRLTSPEARPY---------IVSRCR----NGTEDSLGV 722
Query: 264 SQFFAVHFPA---LPA-SVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN 319
+ FP +PA VV + GD G +A ++ + V+D V A
Sbjct: 723 GGVYMRLFPPAERVPAEEVVSVNSVGDTFAGVLVAGLAKAKREGREARVEDLVGVAQRAA 782
Query: 320 VLFYQS 325
V+ +S
Sbjct: 783 VVTLRS 788
>gi|406937611|gb|EKD71012.1| carbohydrate kinase, PfkB family [uncultured bacterium]
Length = 321
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVARNVA+ ++ + + LG D G +L H + G++ + T+
Sbjct: 37 FGGVARNVAQNLAHWTTDISLQCVLGNDTDGLNMLNHMQQLGVNVLHCQILDGKKTSNYY 96
Query: 65 NILDVNGELAAAVASVE-----SIEKFLTP--DWIRQFIHHISSASVLMVDANLSPPALA 117
+L+ NGEL A+A ++ I+ F P +W + S++ +D NL L
Sbjct: 97 AVLNNNGELCVALADMDIYQEICIDTFSLPWENW--------QNNSLIFLDTNLPAELLT 148
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ + AAE ++ + +PVS K+++I + ++ ++ P+ E A+ N
Sbjct: 149 LAIQKAAERHLTICIDPVSAVKAQKIPEQLDHVFLIKPDLHEASALTN 196
>gi|415723300|ref|ZP_11469474.1| transcriptional regulator [Gardnerella vaginalis 00703C2mash]
gi|388063750|gb|EIK86319.1| transcriptional regulator [Gardnerella vaginalis 00703C2mash]
Length = 382
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGV RN+A + ++ ++ ++S G D G + GL ++ D T
Sbjct: 88 VRYALGGVGRNIAVALERMNTRASLVSVYGGDHNGELFKIDASVNGLDIGYSKQLPDAMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI ++TPD++R+ I I +A ++ +D N+S + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDYMTPDFLRERISIIENADIVALDTNISQKSFEWVC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV---AMANALSGENMFRPID 177
P+ ++ K+ RI S + I D LV A + AL+G +D
Sbjct: 207 D---NYKKPIMVRAITDAKAPRILSRLNCI-------DTLVLDTAESQALTG---ICAVD 253
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
S Q K LL++G++ V + G +GV
Sbjct: 254 E-----RSAVQCAK----ALLKRGVKRVFVNSGREGV 281
>gi|405979309|ref|ZP_11037653.1| ribokinase [Actinomyces turicensis ACS-279-V-Col4]
gi|404392690|gb|EJZ87748.1| ribokinase [Actinomyces turicensis ACS-279-V-Col4]
Length = 317
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 84/324 (25%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A +KLG+K M++ +G D G L+++ R DIDT+ V
Sbjct: 36 FGGKGSNQAIAAAKLGTKVTMVTCVGDDAFGETYLQNY-----------RNNDIDTSFVK 84
Query: 65 NILDVNG--------ELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
+ +G E ++ V+ K LTP+ + + IS S++++ ++ +
Sbjct: 85 QVHGTSGVAPIFVDQESHNSIIIVKGANKGLTPEDLEEAADAISECSLIVLQLEIAFETV 144
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
A+ + IPV P TK + K V PNE EL L+G P
Sbjct: 145 KAAIALGNRLGIPVLLNPAPATKELDLALAAK-CQYVMPNETEL----ELLTG----LPT 195
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
+ ++ A VLL+ G V++TLGS GV S +
Sbjct: 196 STDDE--------VRVAAQVLLDAGCTNVIVTLGSRGVWWLSAD---------------- 231
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
GG V PA + TGAGD +G +
Sbjct: 232 -------------------------GGD----VRLEQFPAKAIDTTGAGDAFIGCFSHCL 262
Query: 297 SSGLDVMQSVAVDDAKTVYAAANV 320
S GL+ +++ + +A YAA +V
Sbjct: 263 SEGLNEAEALELANA---YAALSV 283
>gi|282905918|ref|ZP_06313773.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282331210|gb|EFB60724.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus Btn1260]
Length = 299
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFADMD-IYNLINNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ NIP+ P S+ K R I + I + N+ E A N
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWN 198
>gi|49483760|ref|YP_040984.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|282904091|ref|ZP_06311979.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus C160]
gi|282908828|ref|ZP_06316646.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|295428087|ref|ZP_06820719.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590946|ref|ZP_06949584.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MN8]
gi|418564641|ref|ZP_13129062.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21264]
gi|418582437|ref|ZP_13146515.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418597212|ref|ZP_13160745.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21342]
gi|418603308|ref|ZP_13166695.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21345]
gi|418892240|ref|ZP_13446353.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418901015|ref|ZP_13455071.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1214]
gi|418909361|ref|ZP_13463357.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG149]
gi|418917406|ref|ZP_13471365.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418923191|ref|ZP_13477107.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418982515|ref|ZP_13530223.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418986182|ref|ZP_13533867.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1500]
gi|49241889|emb|CAG40582.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|282327092|gb|EFB57387.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282595709|gb|EFC00673.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus C160]
gi|295128445|gb|EFG58079.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575832|gb|EFH94548.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MN8]
gi|371975778|gb|EHO93070.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21264]
gi|374393123|gb|EHQ64438.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21345]
gi|374395448|gb|EHQ66715.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21342]
gi|377702412|gb|EHT26734.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377704226|gb|EHT28536.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377704796|gb|EHT29105.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377710847|gb|EHT35085.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377730534|gb|EHT54601.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377735150|gb|EHT59186.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377750580|gb|EHT74518.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377752008|gb|EHT75932.1| pfkB carbohydrate kinase family protein [Staphylococcus aureus
subsp. aureus CIG149]
Length = 299
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFADMD-IYNLINNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ NIP+ P S+ K R I + I + N+ E A N
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWN 198
>gi|383310753|ref|YP_005363563.1| ribokinase [Pasteurella multocida subsp. multocida str. HN06]
gi|386834744|ref|YP_006240061.1| ribokinase [Pasteurella multocida subsp. multocida str. 3480]
gi|380872025|gb|AFF24392.1| ribokinase [Pasteurella multocida subsp. multocida str. HN06]
gi|385201447|gb|AFI46302.1| ribokinase [Pasteurella multocida subsp. multocida str. 3480]
Length = 306
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFADKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K L M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTLGKMVAGFR 242
>gi|37678712|ref|NP_933321.1| sugar kinase [Vibrio vulnificus YJ016]
gi|37197453|dbj|BAC93292.1| sugar kinase [Vibrio vulnificus YJ016]
Length = 309
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +K+G+ M+S +G DM + + +++S G++T+ + + + V
Sbjct: 38 GGKGANQAVAAAKMGADVVMVSKVGDDMFADNTIRNFQSYGINTQYVSKVPQTSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN ++ ++ +FL PD I + + S++++ + + A+ + +
Sbjct: 97 -IFVNSTSQNSILIIKGANEFLKPDDIDKAESTLVECSLIVLQLEVPLETVYAAIEFGNK 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IPV P I + V PNE EL + N +P++
Sbjct: 156 HSIPVLLNPAPAVPELDIEYACRCDFFV-PNETELEILVN--------KPVET------- 199
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +K A +LL KG+ +++T+GS G L SK+
Sbjct: 200 -VEQIKEAATILLNKGLNNIIVTMGSKGALWLSKD 233
>gi|283958273|ref|ZP_06375724.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|283790422|gb|EFC29239.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus A017934/97]
Length = 299
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 4 VLGGVARNVAECMSKLGSKP-YMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
V GGVARN+A + KL +K +++ LG D + +L + + + I+ ++++T +
Sbjct: 38 VSGGVARNLAYNIGKLSNKKTILLTLLGNDKEADYILNE-ANKFIDLKHIKIIENMNTGM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++++D NGE+ A ++ I + ++ + I I +A ++VD+N+ ++ ++
Sbjct: 97 FTSVIDYNGEMICGFAGMD-IYNLINNKYLNEKIEVIKNADCVVVDSNIPKESIQYLIQL 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ NIP+ P S+ K R I + I + N+ E A N
Sbjct: 156 CGKSNIPIGIIPASIKKVRNILKNLAKIDYLIFNKKEAEAFWN 198
>gi|169338011|ref|ZP_02621067.2| ribokinase [Clostridium botulinum C str. Eklund]
gi|169295520|gb|EDS77653.1| ribokinase [Clostridium botulinum C str. Eklund]
Length = 299
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++ SK MIS +GLD G IL+ K ++T I + ++ T +
Sbjct: 27 GGKGANQAIACSRMNSKVSMISKVGLDGNGQILVNKLKENNINTNYIFKDSEVSTGMALI 86
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D G + VAS ++ +T + I + I ++ +++ + + K+A +
Sbjct: 87 TVDDEGNNSIIVASGANMT--ITEEEINEASEVIRNSDIVISQFEVPVKTILEGFKLAKQ 144
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N P + + ++KY ++ PNE E A L+G + D N
Sbjct: 145 YNKLTILNPAPAKEIDK--ELLKYTDIIIPNETE----AFELTG---VQVTDLN------ 189
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ K + VL+E GI+ V++TLGS G + +KE
Sbjct: 190 ---SAKESSRVLIEDGIKYVIITLGSKGAAVITKE 221
>gi|301755916|ref|XP_002913806.1| PREDICTED: ribokinase-like [Ailuropoda melanoleuca]
Length = 322
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTQDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ IS A V++ ++P A + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLREAARTISRAKVMLCQLEITPEASLEALTMAH 168
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P V+ R T V NE E A L+G + P D +
Sbjct: 169 SNGVKTLFNPAPAVAGLDPRFYT----LSDVFCCNETE----AEILTGLAVGSPADAGQ- 219
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVL+E+G +V++TLG++G ++ S+
Sbjct: 220 -----------AALVLMERGCHVVIVTLGAEGCVMLSQ 246
>gi|379728060|ref|YP_005320245.1| ribokinase [Melissococcus plutonius DAT561]
gi|376318963|dbj|BAL62750.1| ribokinase [Melissococcus plutonius DAT561]
Length = 307
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++Y GG +N A ++G+ +I A+G D G +L + K+ G+STE IR+ + T
Sbjct: 33 LDYFYGGKGQNQAISSVRIGANVQLIGAVGTDSFGEKILANLKTEGISTENIRQVEGAFT 92
Query: 61 --AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
A+V + N + A A+ + + PD++ F I ++ VL+V + + A
Sbjct: 93 GLAMVLKLPQDNSIIVAPGAN-----ELVNPDYLTNFTKKIITSDVLLVQMEIPFETVLA 147
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
S KIA + P S R ++++ V++PN+ E
Sbjct: 148 SIKIAKRNQVITIVNPAPY--SERCHELLEFTDVLTPNKTEF 187
>gi|281344936|gb|EFB20520.1| hypothetical protein PANDA_001634 [Ailuropoda melanoleuca]
Length = 293
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 22 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTQDAATGTAS 81
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ IS A V++ ++P A + +A
Sbjct: 82 II--VNNEGQNIIVIVAGANLLLNTEDLREAARTISRAKVMLCQLEITPEASLEALTMAH 139
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P V+ R T V NE E A L+G + P D +
Sbjct: 140 SNGVKTLFNPAPAVAGLDPRFYT----LSDVFCCNETE----AEILTGLAVGSPADAGQ- 190
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVL+E+G +V++TLG++G ++ S+
Sbjct: 191 -----------AALVLMERGCHVVIVTLGAEGCVMLSQ 217
>gi|409051629|gb|EKM61105.1| hypothetical protein PHACADRAFT_82127 [Phanerochaete carnosa
HHB-10118-sp]
Length = 783
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 139/348 (39%), Gaps = 71/348 (20%)
Query: 5 LGGVARNVAECMSKLGS--------KPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQK 56
LGGV RN+AE + S ++S +G D G +L E G+ T+G+ +
Sbjct: 410 LGGVGRNIAEAAHRALSGTSSTSARSTLLVSPVGSDSFGKLLTEETAGLGMRTDGLLVME 469
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLM-VDANLSPPA 115
+AV + +LD G L V+ ++ IE L+ +R F+ A L+ VD NLS +
Sbjct: 470 SQRSAVCNMVLDGAGNLIGGVSDMDIIES-LSSGMVRIFLLAKPHAPTLVAVDGNLSEAS 528
Query: 116 LAASCKIAAECNIPV-WFEPVSVTKSRRI-----------TSVVKYITVVSPNEDELVAM 163
L + + E +P EP SV KS RI T+ + + SPN EL +
Sbjct: 529 LRSVVQSCFEKEVPAPQSEPTSVPKSVRILPAIASILGKDTADIAPVAFASPNLIELAHL 588
Query: 164 ANALSGENM--------FRPIDR---NKHSAESLFQTL----------KPAILVLLEKGI 202
S E + +R ID H L Q K ++ LL +GI
Sbjct: 589 YRTASSEPLGLTSHQHWWRVIDSMDLGSHFRMELEQLARLNACDSTPSKGSLSFLLGEGI 648
Query: 203 -----------RLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHS 251
+ +VL G G L + RI + ++ + R +
Sbjct: 649 AQMAVHLLPFFQHLVLKAGEKG-------LFTVFRIPSPAAQQSAWAYE-------RSNI 694
Query: 252 SRYSGAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASI 296
R + G H PA+ P +V +TGAGD LVG LA++
Sbjct: 695 RRRQVVAQGRDGGIVVLKHHPAVPLRPTDIVNVTGAGDSLVGVVLATL 742
>gi|253682816|ref|ZP_04863611.1| ribokinase [Clostridium botulinum D str. 1873]
gi|416355179|ref|ZP_11681774.1| ribokinase [Clostridium botulinum C str. Stockholm]
gi|253561015|gb|EES90469.1| ribokinase [Clostridium botulinum D str. 1873]
gi|338195275|gb|EGO87578.1| ribokinase [Clostridium botulinum C str. Stockholm]
Length = 310
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++ + +MI +G+D G+IL+ K ++TE I + + T
Sbjct: 38 GGKGSNQAIACSRMNANVFMIGKVGVDGNGDILVSKLKENNINTEYIFKDDKVSTGTA-- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+ V+ E ++ +T + I + + I ++ +++ + + KIA E
Sbjct: 96 IITVDHEANNSIIVASGSNMTITEEEINRTYNIIKNSDIVISQFEVPMRIILKGFKIAKE 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N P + R ++KY ++ PNE E A L+G + +
Sbjct: 156 NNRITILNPAPAKEINR--ELLKYTDIIIPNETE----AFELTGIEV------------T 197
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ K A VL+++G++ V++TLGS G + +KE
Sbjct: 198 DLDSAKKAAYVLMKEGVKCVIITLGSKGAAVITKE 232
>gi|440680809|ref|YP_007155604.1| ribokinase [Anabaena cylindrica PCC 7122]
gi|428677928|gb|AFZ56694.1| ribokinase [Anabaena cylindrica PCC 7122]
Length = 304
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++KLG +MI +G D G L+E+ + +G+ T I +++ + V
Sbjct: 37 GGKGANQAVALAKLGIPTHMIGRIGADSFGEELIENLQVSGVQTNNILITENVSSGVAII 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D +GE + + + D I + H + A+ +++ + + + K A +
Sbjct: 97 TVDHSGE--NHIVVIPGANAQVNQDDIERLTHLLPEATAILLQLEIPIDVVVKAAKSARK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI V +P +S+ + I +++PNE E A+ L G P++ + +A+
Sbjct: 155 ANITVILDPAP-AQSQLPDELYPLIDIITPNEIE----ASQLVG----FPVNGEETAAK- 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
A +LL++G++ V+ LG+ GV
Sbjct: 205 -------AATILLQRGVKCAVIKLGAKGV 226
>gi|332685858|ref|YP_004455632.1| ribokinase [Melissococcus plutonius ATCC 35311]
gi|332369867|dbj|BAK20823.1| ribokinase [Melissococcus plutonius ATCC 35311]
Length = 225
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++Y GG +N A ++G+ +I A+G D G +L + K+ G+STE IR+ + T
Sbjct: 33 LDYFYGGKGQNQAISSVRIGANVQLIGAVGTDSFGEKILANLKTEGISTENIRQVEGAFT 92
Query: 61 --AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
A+V + N + A A+ + + PD++ F I ++ VL+V + + A
Sbjct: 93 GLAMVLKLPQDNSIIVAPGAN-----ELVNPDYLTNFTKKIITSDVLLVQMEIPFETVLA 147
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
S KIA + P S R ++++ V++PN+ E
Sbjct: 148 SIKIAKRNQVITIVNPAPY--SERCHELLEFTDVLTPNKTEF 187
>gi|379794809|ref|YP_005324807.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356871799|emb|CCE58138.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 372
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ S ++T+ +++ ++ +T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSSPFMNTDHVQQFENTNTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ +G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKDGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + + + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAVDWIITNKDETETYLN 250
>gi|110802217|ref|YP_698780.1| kinase yeiC [Clostridium perfringens SM101]
gi|110682718|gb|ABG86088.1| kinase, pfkB family [Clostridium perfringens SM101]
Length = 321
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P + K
Sbjct: 101 AILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIMEYLLKNFK 158
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ N + +PVS K+ + ++K + PN E A L+G PI
Sbjct: 159 DKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG----FPI------- 201
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
+ L A L GI+ V ++L +DG+
Sbjct: 202 -TDIDDLIKASNYFLGLGIKKVFISLDADGIF 232
>gi|322834266|ref|YP_004214293.1| ribokinase [Rahnella sp. Y9602]
gi|384259448|ref|YP_005403382.1| ribokinase [Rahnella aquatilis HX2]
gi|321169467|gb|ADW75166.1| ribokinase [Rahnella sp. Y9602]
gi|380755424|gb|AFE59815.1| ribokinase [Rahnella aquatilis HX2]
Length = 404
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 117/303 (38%), Gaps = 73/303 (24%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+ G++ + +S +G D +H S+ + + + + DT N
Sbjct: 137 GGKGANQATAVSRAGARVHFVSKVGKDQFSQFAYDHLTSSEIHSFTLYQS---DTEPTGN 193
Query: 66 IL----DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE A+ S K ++ D + + + VL+V + A ++ K
Sbjct: 194 AIIYVSQENGENMIAIYS--GANKTISEDEVAAIAPELEDSDVLLVQLENNFAATLSAMK 251
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + V P S ++Y+ V++PNE E A+ LSG ID
Sbjct: 252 LAKALGVKVILNPAPF--SSHALECLEYVDVITPNETE----ASQLSG------IDVKD- 298
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+ K A ++ +G R V++T+GS G LL
Sbjct: 299 -----LASAKEAAQRIVSQGARRVIITMGSRGALLFD----------------------- 330
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
G+QF H PA PA V TGAGD G +SI++G
Sbjct: 331 ---------------------GNQF--QHIPAFPALSVDTTGAGDAFNGALASSIANGQS 367
Query: 302 VMQ 304
++Q
Sbjct: 368 LVQ 370
>gi|225405661|ref|ZP_03760850.1| hypothetical protein CLOSTASPAR_04882 [Clostridium asparagiforme
DSM 15981]
gi|225042806|gb|EEG53052.1| hypothetical protein CLOSTASPAR_04882 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 118/309 (38%), Gaps = 75/309 (24%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y+ GG N A M++LG+ M +G D G +L+E+ K+ G+ TE I+ + T V
Sbjct: 41 YIPGGKGANQAVAMARLGANVEMFGCVGDDGNGALLIENLKAQGVKTEHIKTVEHTPTGV 100
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ GE + V + +I H + + ++++ + ++ +
Sbjct: 101 AFITV---GERDNTIVIVAGANNRVDRAYIGHIEHELKKSDMVLLQHEIPLESIEYVIDL 157
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P ++ ++++ +T ++PNE E +F +DR++
Sbjct: 158 CYRNQIPVILNPAPARSLKQ--NLIEKVTYLTPNEHE---------ARILFGAVDRDE-- 204
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
LL + +++TLGS GV C
Sbjct: 205 --------------LLRRYPEKLIITLGSKGVCTC------------------------- 225
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
R SG + + PA P +V+ TGAGD L G I+ G ++
Sbjct: 226 ----------RKSGEI----------LTIPARPGNVIDTTGAGDTLNGAFCVKIAEGANI 265
Query: 303 MQSVAVDDA 311
+++ +A
Sbjct: 266 EEALQFANA 274
>gi|406678284|ref|ZP_11085462.1| hypothetical protein HMPREF1170_03670 [Aeromonas veronii AMC35]
gi|404622970|gb|EKB19826.1| hypothetical protein HMPREF1170_03670 [Aeromonas veronii AMC35]
Length = 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LGS +++A+G D G+ LLE + AG+ +R+ +D S
Sbjct: 93 GGVGRNIAENLARLGSDTRLLTAVGNDQYGHHLLEVSQRAGVD---VRQTLVLDGHATSC 149
Query: 66 IL---DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
L D +GE++ A+ + IE+ LTP + + A + ++D NL+ L
Sbjct: 150 YLSLHDGSGEMSCAINDMAIIEQ-LTPARLTPLAGFLGGARLWVLDTNLAIHTL--DWLF 206
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ + ++ + VSV K +I + I + PN E A L G + P
Sbjct: 207 ERQGDHAIFVDTVSVAKVDKIRPWLGKIHTLKPNRSE----AEQLCGMTIAGP------- 255
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+T G++ + L+LG G+ E
Sbjct: 256 -----ETWPMVAAWFHRAGVKRLFLSLGEQGIFYSDGE 288
>gi|423207902|ref|ZP_17194458.1| hypothetical protein HMPREF1168_04093 [Aeromonas veronii AMC34]
gi|404620969|gb|EKB17866.1| hypothetical protein HMPREF1168_04093 [Aeromonas veronii AMC34]
Length = 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID---TAV 62
GGV RN+AE +++LGS +++A+G D G+ LLE + AG+ +R+ +D T+
Sbjct: 93 GGVGRNIAENLARLGSDTRLLTAVGNDQYGHHLLEVSQRAGVD---VRQTLVLDGHATSC 149
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+I D +GE++ A+ + IE+ LTP + + A + ++D NL+ L
Sbjct: 150 YLSIHDGSGEMSCAINDMAIIEQ-LTPARLTPLGGFLGGAKLWVLDTNLAIHTL--DWLF 206
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ + ++ + VSV K +I + I + PN E A L G + P
Sbjct: 207 ERQGDHAIFVDTVSVAKVEKIRPWLGKIHTLKPNRSE----AEQLCGMTIAGPDS----- 257
Query: 183 AESLFQTLKPAILVLLEK-GIRLVVLTLGSDGVLLCSKE 220
P + + G++ + L+LG G+ E
Sbjct: 258 --------WPMVAAWFHRAGVKRLFLSLGEQGIFYSDGE 288
>gi|18310464|ref|NP_562398.1| sugar kinase [Clostridium perfringens str. 13]
gi|110799773|ref|YP_696169.1| PfkB family kinase [Clostridium perfringens ATCC 13124]
gi|168208026|ref|ZP_02634031.1| kinase, pfkB family [Clostridium perfringens E str. JGS1987]
gi|169347249|ref|ZP_02866188.1| kinase, pfkB family [Clostridium perfringens C str. JGS1495]
gi|422346144|ref|ZP_16427058.1| hypothetical protein HMPREF9476_01131 [Clostridium perfringens
WAL-14572]
gi|422874401|ref|ZP_16920886.1| PfkB family kinase [Clostridium perfringens F262]
gi|18145144|dbj|BAB81188.1| probable sugar kinase [Clostridium perfringens str. 13]
gi|110674420|gb|ABG83407.1| kinase, pfkB family [Clostridium perfringens ATCC 13124]
gi|169296645|gb|EDS78776.1| kinase, pfkB family [Clostridium perfringens C str. JGS1495]
gi|170660669|gb|EDT13352.1| kinase, pfkB family [Clostridium perfringens E str. JGS1987]
gi|373226766|gb|EHP49088.1| hypothetical protein HMPREF9476_01131 [Clostridium perfringens
WAL-14572]
gi|380304709|gb|EIA16996.1| PfkB family kinase [Clostridium perfringens F262]
Length = 321
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P + K
Sbjct: 101 AILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIMEYLLKNFK 158
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ N + +PVS K+ + ++K + PN E A L+G F D +
Sbjct: 159 DKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD--- 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L A L GI+ V ++L +DG+
Sbjct: 207 ------LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|269977878|ref|ZP_06184834.1| ribokinase [Mobiluncus mulieris 28-1]
gi|306818354|ref|ZP_07452080.1| ribokinase [Mobiluncus mulieris ATCC 35239]
gi|269933958|gb|EEZ90536.1| ribokinase [Mobiluncus mulieris 28-1]
gi|304648863|gb|EFM46162.1| ribokinase [Mobiluncus mulieris ATCC 35239]
Length = 299
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S+LGS+ M++ +G DM ++++ + G+ T+ + R + T+ V+
Sbjct: 37 GGKGANQAVAASRLGSQVLMVTRVGNDMFAENTIKNFAANGIDTKYVMRTE--ATSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ E ++ V+ L PD + I+ ++++ + + A+ +A E
Sbjct: 95 IF-VDSESRNSILIVKGANARLCPDDVMNAKDAIAKCKIIVMQLEIPLETVYATIDLAEE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P + ++ VK + + PNE EL + L+G P+D +
Sbjct: 154 LNIPVLLNPAPADPALQLEK-VKKVKFIVPNESEL----SLLTG----MPVDTH------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ + A VLL+ GI V++TLGS G + S
Sbjct: 199 --EDIINAAHVLLDAGIPNVIVTLGSKGAVWIS 229
>gi|160946502|ref|ZP_02093711.1| hypothetical protein PEPMIC_00466 [Parvimonas micra ATCC 33270]
gi|158447618|gb|EDP24613.1| kinase, PfkB family [Parvimonas micra ATCC 33270]
Length = 372
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y GGV +N+AE + K+G + IS G D+ + ++ K GL + + +
Sbjct: 92 YSFGGVGKNIAENLLKMGIENKFISVFGDDVYSREIKDYLKKIGLDFSNSKFLTNRGMSN 151
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ILD N +L A++S+E +++ + ++I + I I S +++D NL L CK
Sbjct: 152 YISILDENNDLFTAISSMEVLDE-INIEFISKLIDLIKSYKYIVMDTNLREDVLEYICK- 209
Query: 123 AAEC-NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
C N + + VS K+ +I ++KYI ++ PN E + + P +
Sbjct: 210 --NCPNSKIIVDCVSRKKALKIKKLLKYIYLLKPNIYEAEELTDI--------P-----Y 254
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
ES L+ + V LEKG++ + +++G G+L K
Sbjct: 255 ENES---DLEKIVNVFLEKGVQKIFISMGEKGILYADK 289
>gi|205372240|ref|ZP_03225055.1| fructokinase [Bacillus coahuilensis m4-4]
Length = 316
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 130/330 (39%), Gaps = 84/330 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +++LGSK + +G D+ G L + G+ST+G+ KD+ T VV
Sbjct: 31 GGAPANVAVGLARLGSKSMFLGKVGDDVLGRFLERTLLNYGVSTKGLAFTKDVRTGVVFV 90
Query: 66 ILDVNGELAAAVASVESIEKFLTPD-----WIRQF-IHHISSASVLMVDANLSPPALAAS 119
L NGE + S ++FL W ++ I H S S++ + S A +
Sbjct: 91 TLAENGERSFDFYINPSADRFLEVGDLEEVWFQEHRILHFGSISLI---SEPSKSATKKA 147
Query: 120 CKIAAECNIPVWFEP--------VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
++A E + V ++P I S++ V+ +E+EL ++GE
Sbjct: 148 VQLAKENGMIVSYDPNLRLVLWDSEAKAKEEIISMLGMADVLKISEEEL----EFITGE- 202
Query: 172 MFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
+ ID+ +L I+LV++TLG +G + +KE
Sbjct: 203 --KDIDKGAS--------------ILSSYNIKLVLITLGGEGSYVFTKE----------- 235
Query: 232 TKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGG 291
GS H PA+ + TGAGD V G
Sbjct: 236 -------------------------------GS----THVPAMKVEALDTTGAGDAFVSG 260
Query: 292 TLASISSGLDVMQSVAVDDAKTVYAAANVL 321
L ++ ++ + + +AK + A+VL
Sbjct: 261 ILYRLNEWNGSLEELTLKEAKEMARFASVL 290
>gi|182624716|ref|ZP_02952497.1| kinase, pfkB family [Clostridium perfringens D str. JGS1721]
gi|177910113|gb|EDT72507.1| kinase, pfkB family [Clostridium perfringens D str. JGS1721]
Length = 321
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P + K
Sbjct: 101 AILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIMEYLLKNFK 158
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ N + +PVS K+ + ++K + PN E A L+G F D +
Sbjct: 159 DKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD--- 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L A L GI+ V ++L +DG+
Sbjct: 207 ------LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|327265240|ref|XP_003217416.1| PREDICTED: ribokinase-like [Anolis carolinensis]
Length = 310
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 35/271 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K MI +G D GN +E++K G+ TE + + +D T S
Sbjct: 39 FGGKGANQCVQAARLGAKTSMICKVGKDSFGNDYIENFKKNGIPTEFVNQVEDAATGAAS 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ VN E + V L + +++ H IS A V++ ++P + K+A
Sbjct: 99 IV--VNSEGQNFIVIVAGANLLLNSNDLKKAAHVISKAKVVVCQLEVTPAISLEAMKMAH 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P + + NE E A L+G + D +
Sbjct: 157 ASGVKTLFNPAPALADLN-PEFYTHSDIFCCNESE----AEILTGITVGNAEDAGRVGC- 210
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+LLE+G + ++TLG +G ++ SK + + +K P
Sbjct: 211 -----------ILLERGCKTAIVTLGPEGCVMVSKNAPTPKHVPAQKVTP---------- 249
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
V + + GA+ F+ ++P LP
Sbjct: 250 VDTTGAGDSFVGAL------AFYLAYYPHLP 274
>gi|168210070|ref|ZP_02635695.1| kinase, pfkB family [Clostridium perfringens B str. ATCC 3626]
gi|170711899|gb|EDT24081.1| kinase, pfkB family [Clostridium perfringens B str. ATCC 3626]
Length = 319
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P + K
Sbjct: 101 AILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIMEYLLKNFK 158
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ N + +PVS K+ + ++K + PN E A L+G F D +
Sbjct: 159 DKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD--- 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L A L GI+ V ++L +DG+
Sbjct: 207 ------LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|421496202|ref|ZP_15943440.1| carbohydrate kinase [Aeromonas media WS]
gi|407184815|gb|EKE58634.1| carbohydrate kinase [Aeromonas media WS]
Length = 363
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE +++LG+ +++A+G D G+ LLE + AG+ + T+ +
Sbjct: 93 GGVGRNIAENLARLGTDTRLLTAVGNDQYGHHLLEVSQRAGVDVRQVLVLDGQATSCYLS 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D +GE++ AV + I++ LTP + + +A + ++D NL+ L + E
Sbjct: 153 LHDGSGEMSCAVNDMGIIDE-LTPARLAPLSGFLGAARLWVLDTNLATHTLDWLFERQGE 211
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I V + VSV K +I + I + PN E A L G + P
Sbjct: 212 HIIFV--DTVSVAKVEKIRPWLHRIHTLKPNRTE----AEQLCGFTIAGP---------- 255
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
T A G++ + L+LG G+ E
Sbjct: 256 --DTWPMAAAWFHRAGVQRLFLSLGDQGIFYSDGE 288
>gi|168216867|ref|ZP_02642492.1| kinase, pfkB family [Clostridium perfringens NCTC 8239]
gi|182381039|gb|EDT78518.1| kinase, pfkB family [Clostridium perfringens NCTC 8239]
Length = 321
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDENGKSIVEHSKKIGYHMDDSMVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK-IA 123
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P + K
Sbjct: 101 AILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIMEYLLKNFK 158
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ N + +PVS K+ + ++K + PN E A L+G F D +
Sbjct: 159 DKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD--- 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L A L GI+ V ++L +DG+
Sbjct: 207 ------LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|28211945|ref|NP_782889.1| ribokinase [Clostridium tetani E88]
gi|28204388|gb|AAO36826.1| ribokinase [Clostridium tetani E88]
Length = 309
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 24/221 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++ V GG N ++LGSK YMI LG D G+IL + ++ ++ E I + T
Sbjct: 33 LDKVAGGKGANQGVAAARLGSKVYMIGKLGKDDNGDILYRNIENDNINVEYILKDDKEPT 92
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ +D +G + V S ++ L + I QF I +++L+ +
Sbjct: 93 GMAIVTVDKDGNNSIVVVSGANMS--LKKEDIYQFKEAIKDSNILITQFETPIDVAEDAF 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDR 178
K+A + P ++ IT +++K ++ PNE E + + EN
Sbjct: 151 KLAKSFGVTTILNPAP---AKEITENLLKNTDIIIPNEMEAFEITKIKIKNEN------- 200
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+K + V LE+GI+ V++TLG G + SK
Sbjct: 201 ----------DIKKSAQVFLERGIKFVIITLGEKGAAIISK 231
>gi|224536955|ref|ZP_03677494.1| hypothetical protein BACCELL_01831 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521442|gb|EEF90547.1| hypothetical protein BACCELL_01831 [Bacteroides cellulosilyticus
DSM 14838]
Length = 302
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L + I+ G D+ G +E ++ G+ E I + + V
Sbjct: 39 GGKGANQAVAAARLKGNVHFIAKTGNDLFGKRSIEQYEDEGIHVENIYSDLTLPSGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D+NGE + A+AS L+P+ IR+ I +L++ + + + +IA+E
Sbjct: 99 MVDMNGENSIAIAS--GANGSLSPEDIRKAQPTIEKGDILLMQLEIPIETVEYAAQIASE 156
Query: 126 CNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P +R +++ +++ + ++ PNE E A LSG + D
Sbjct: 157 QGIKVILNP---APARALSNKLLQNLYMIIPNETE----AEILSG---IKVTD------- 199
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+++ + A ++ KG+ +VV+TLGS G L+ K+
Sbjct: 200 --WESARRAADIISAKGVDIVVITLGSKGALIKEKD 233
>gi|238501912|ref|XP_002382190.1| IdgA domain protein [Aspergillus flavus NRRL3357]
gi|220692427|gb|EED48774.1| IdgA domain protein [Aspergillus flavus NRRL3357]
gi|391863730|gb|EIT73030.1| putative carbohydrate kinase [Aspergillus oryzae 3.042]
Length = 790
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 141/351 (40%), Gaps = 63/351 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ LGGV NVA LGS S +G D++G L ++ GLST G++ ++
Sbjct: 430 ITQSLGGVGHNVAIATKYLGSSVLFCSVVGDDLSGRAALTALRTEGLSTAGVQVLPASNS 489
Query: 61 AVVSNILDVNG---ELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
A + + VN +L A+A + E E+ L + + + + ++VD+N SP
Sbjct: 490 ARTAQYVAVNDAKKDLVMAMADMGIMELPEQKLDFEGFWETLLSRTKPQWVIVDSNWSPE 549
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSPNEDE 159
L +A + V FEPVS KS R+ S I++ +PN+ E
Sbjct: 550 VLTKWVAVAKKHGARVAFEPVSNAKSCRLFSKSAEVNAAISPSASVPNNAISLATPNQFE 609
Query: 160 LVAMANALSGENMFRP------ID---------RNKHSAESLFQTLK---PAILVLLEKG 201
L M A +F ID R++ A + Q + P + L
Sbjct: 610 LTTMYMAARDSGLFDSEGWWHIIDAMGMSSGGSRDRLVAMTSNQLVDQGIPQQSIQLLPY 669
Query: 202 IRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPA 261
I ++ LGS GVL+ R+ + PY SR A E
Sbjct: 670 IPCLITKLGSQGVLVTQLLRPGDPRLTSPDSAPYILSRAAL--------------ADELV 715
Query: 262 GGSQFFAVHFPALPASV------VRLTGAGDCLVGGTLASISSGLDVMQSV 306
GG + FP PA+V V + GAGD L+G ++ + G ++ V
Sbjct: 716 GG--VYMRLFP--PAAVLADEEIVSVNGAGDTLLGAVISGLVKGAKTVEDV 762
>gi|253574834|ref|ZP_04852174.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845880|gb|EES73888.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 446
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V ++ GG N A ++LG+ MI A+G D G LL + G+ G++R D T
Sbjct: 37 VRFIPGGKGANQAVAAARLGASTSMIGAVGADNFGEDLLAALRKEGVDVSGVKRLADTAT 96
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V S I +G+ ++ V +TP I Q + + A ++++ + + +
Sbjct: 97 GVAS-IYVADGD--NSILVVPGANDQVTPADIDQHLDKLKEADIVLLQLEIPVETVFYAA 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+IA V P + + + +YI ++PN ELV A G +M D
Sbjct: 154 RIAKSLGKKVILNPAPARELPQ--EIYEYIDYITPNRTELVRYAGI--GASMTDATD-TT 208
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
H+ ++ A+ L E G+ V+ TLG++G
Sbjct: 209 HTNSDF---IRMAMQRLKELGVAQVITTLGAEG 238
>gi|387769941|ref|ZP_10126135.1| HTH domain protein [Pasteurella bettyae CCUG 2042]
gi|386905697|gb|EIJ70456.1| HTH domain protein [Pasteurella bettyae CCUG 2042]
Length = 367
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV RN+AE + +L + +IS +G D + ++ S ++TE + + T +
Sbjct: 92 IGGVVRNIAENLGRLEQEVVLISTVGNDPEW-LRIKALSSPFMNTESVIILEGQSTGCYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+LD++GE+ +A + E F P+ + + ++ +A L+VD N + C A
Sbjct: 151 ALLDIDGEMYLGLADMSIYEHF-KPELLIKQQQYLRNAKCLVVDLNCPKETIEFLCAYAQ 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ I + VS K + + + N+ EL A+ R ID
Sbjct: 210 KQQIKLAIIAVSEPKMIHLPKQLTGVDCFFINKGELGALVG--------RIIDTE----- 256
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ L+ AI +L G++ ++LT GS GVL +++
Sbjct: 257 ---EKLREAIYEVLAYGVKKIILTAGSKGVLCVTRD 289
>gi|403668567|ref|ZP_10933829.1| sugar kinase yeiI [Kurthia sp. JC8E]
Length = 364
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
+ +GGVARN+AE + +L +++ G D + E K A ++ + + + + T
Sbjct: 90 HSIGGVARNIAENLGRLEHDVQLVTTAGKDTDWQWVYEASK-AYMNLQNVEQLEHCATGS 148
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ I+D GEL A A+++ + L P I++ +AS ++VD N + +
Sbjct: 149 YTAIVDDEGELVLAAANMDVYDALL-PQVIQRNESAFLNASCIIVDLNCPKETVQYLQQF 207
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ +IP PVS K R+ S +K +T N +E A L+ ++ P+D
Sbjct: 208 VIDRSIPFVVVPVSGPKMNRLPSTLKGVTWFICNREE----AEILTNISLETPLD----- 258
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ A+ L EKG +V+T G+ GV
Sbjct: 259 -------FERALQALREKGAENIVITAGAKGV 283
>gi|68490498|ref|XP_710943.1| hypothetical protein CaO19.6187 [Candida albicans SC5314]
gi|46432205|gb|EAK91701.1| hypothetical protein CaO19.6187 [Candida albicans SC5314]
Length = 339
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 127/319 (39%), Gaps = 73/319 (22%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV N+A + +S +G D AG + E G+ + G TA
Sbjct: 22 IGGVGYNIARASGYVCDSTKFVSRVGNDAAGKTIQESVPGLGVGSGG--------TAQYV 73
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ D +GEL A A + IE+ D ASV + D NLSP ++ +
Sbjct: 74 SMHDSSGELVVACADMSVIEEEFEVD---------HKASVAVYDCNLSPKTVSKALD-NN 123
Query: 125 ECNIPVWFEPVSVTKSRRITSV---------VKYIT------------VVSPNEDELVAM 163
E NI EP S K+RRI + VK IT + +DE +
Sbjct: 124 EYNI---IEPTSHVKARRIGEMELAVFPNNKVKLITPTVEELASIYDSMKDKFDDEWFGV 180
Query: 164 ANALSGENMFRPIDR---NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+A+ + + +D+ +K + FQ L P +L K LG DGVLL S
Sbjct: 181 LDAMKVDQIRERLDKKWYDKGVYQQCFQLL-PFFQNILVK--------LGKDGVLLVS-- 229
Query: 221 LLSSMR--IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASV 278
L S++ + T PY R S YS + ++F V V
Sbjct: 230 LCSTVEDYKSIPTTSPY------------RPKSIIYSKGNQVGAVVEYFPV---PKDVEV 274
Query: 279 VRLTGAGDCLVGGTLASIS 297
V +TGAGD LVG A IS
Sbjct: 275 VNVTGAGDTLVGYLAAKIS 293
>gi|23397419|ref|NP_694876.1| ribokinase [Mus musculus]
gi|81901470|sp|Q8R1Q9.1|RBSK_MOUSE RecName: Full=Ribokinase
gi|19483973|gb|AAH23339.1| Ribokinase [Mus musculus]
gi|74223857|dbj|BAE23825.1| unnamed protein product [Mus musculus]
Length = 323
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + +D T S
Sbjct: 52 FGGKGANQCVQAARLGAKAAIVCKVGNDSFGNDYIENLKQNHISTEFTYQTRDAATGTAS 111
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V FL + +++ IS A V++ +SP A + +A
Sbjct: 112 II--VNNEGQNIIVIVAGANLFLNSEDLKKAASVISRAKVMICQLEISPAASLEALTMAR 169
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P ++ NE E A L+G + P K
Sbjct: 170 RSGVKTLFNPAPAMADLD-PQFYTLSSIFCCNESE----AEILTGHAVSDPTTAGK---- 220
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A ++LLE+G ++VV+TLG+ G ++ S+
Sbjct: 221 --------AAMILLERGCQVVVITLGASGCVILSQ 247
>gi|170760668|ref|YP_001786982.1| ribokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169407657|gb|ACA56068.1| ribokinase [Clostridium botulinum A3 str. Loch Maree]
Length = 300
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L S M+S +G D+ G ++++K+ G++T + QK+ + V
Sbjct: 37 GGKGANQAVAAARLRSDVMMVSKVGDDLFGQNTIKNFKNNGVNTGFVTVQKNQASGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K L+P I + S++++ + + + A +
Sbjct: 97 FVD--RESRNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P K V K V PNE EL + N +P++
Sbjct: 155 NNIPVLLNPAPAIKELDFNYVYKCDFFV-PNETELEILTN--------KPVNT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ ++ A ++ +KG++ V++T+GS G+L +K+
Sbjct: 199 -IEGIRKAAHLIGDKGVKNVIVTMGSKGLLWINKD 232
>gi|326790489|ref|YP_004308310.1| PfkB domain-containing protein [Clostridium lentocellum DSM 5427]
gi|326541253|gb|ADZ83112.1| PfkB domain protein [Clostridium lentocellum DSM 5427]
Length = 319
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+AE MS +G+ IS LG D G +L + GL T
Sbjct: 43 GGVCRNIAENMSLVGTNTQFISILGDDEKGKDILRQAEKVGLDMSNTLIVHGGSTPTYMA 102
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
ILD NGE+ +AV + +F + + + + I +A + + A+ +PP + +
Sbjct: 103 ILDENGEMVSAVVDTKLANEF-SKEALSERASIIENAEYMFLGAD-NPPFI-EHIVTTYQ 159
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+PVS K+ RI ++ Y V PN E
Sbjct: 160 GKTKFVLDPVSAAKAARIKHLLHYFHTVKPNRHE 193
>gi|417398918|gb|JAA46492.1| Putative ribokinase [Desmodus rotundus]
Length = 322
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 35/271 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNNYIENLKQNDISTEFAYQTEDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R IS A VL+ ++P + +A
Sbjct: 111 II--VNKEGQNIIVIVAGANLLLNSEDLRAAAGAISRARVLICQLEVTPATSLEALAMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P T V NE E A L+G + P D K
Sbjct: 169 SRGVKTLFNPAPATADLD-PQFYALSDVFCCNESE----AEILTGLTVSSPADAGK---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
A LVL+ +G ++V++TLG++G ++ S+ + P + K
Sbjct: 220 --------AALVLMGRGCQVVIITLGAEGCVMLSQS----------EPGPQHIPTENVKA 261
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
V + + GA+ F+ ++P LP
Sbjct: 262 VDTTGAGDSFVGALA------FYLAYYPNLP 286
>gi|345021744|ref|ZP_08785357.1| ribokinase [Ornithinibacillus scapharcae TW25]
Length = 296
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+K +I ALG D G LL+ K G++T GI +KD+ T + +
Sbjct: 41 GGKGANQAVAAARLGAKVNLIGALGDDAFGTSLLDTLKIEGINTHGISIEKDVSTGIATI 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ N + ++P + ++ I + V+++ + + + + E
Sbjct: 101 LVSDNDN---RIIVTPGANYHVSPALVERYKELIMHSDVVLLQLEIPLETVEYTTHLCKE 157
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+IPV P K R +VV T ++PNE E+ M N
Sbjct: 158 NHIPVVINPAPYQKLPR--NVVDMTTYLTPNELEVEEMKN 195
>gi|415726482|ref|ZP_11470821.1| transcriptional regulator [Gardnerella vaginalis 00703Dmash]
gi|388063092|gb|EIK85684.1| transcriptional regulator [Gardnerella vaginalis 00703Dmash]
Length = 382
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ D T
Sbjct: 88 VRYMLGGVGRNIAVALERLNMRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPDSMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ +L C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSLEWLC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV---AMANALSGENMFRPID 177
P+ ++ K+ R+ S + I D LV A + AL+G N
Sbjct: 207 D---RYRRPIVVRAITDAKAPRVLSRLSKI-------DTLVLDTAESQALTGINAI---- 252
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ SA LL++G++ V + G GV
Sbjct: 253 -DERSATRCAGA-------LLKRGVKNVFVNAGRAGV 281
>gi|421872382|ref|ZP_16304000.1| ribokinase [Brevibacillus laterosporus GI-9]
gi|372458355|emb|CCF13549.1| ribokinase [Brevibacillus laterosporus GI-9]
Length = 311
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+++ GG N A ++LG++ MI +LG D G+ L + K G+ I+R ++ T
Sbjct: 35 VHFIPGGKGANQAVACARLGAQTSMIGSLGRDAFGDSLEQAMKQEGIQVSTIKRVENAPT 94
Query: 61 AVVSNILDVNGE-----LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPA 115
+ S IL G+ +A A A + L D ++ +A ++++ +
Sbjct: 95 GIAS-ILLAEGDNQIIVVAGANAHTSMTDVDLHADTVK-------AADIVLLQLEIPIET 146
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP 175
+ + K+A E V P K + YI V++PNE EL +
Sbjct: 147 VVHTAKLAKEAGKMVILNPAPAQKLPD--ELFGYIDVMTPNESELY----------LLTG 194
Query: 176 IDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
+++N+ + ++ TL A+ L KG++ VV TLG+ G
Sbjct: 195 LEQNQATDKAT--TLSAAMKALHAKGVKHVVTTLGATG 230
>gi|83767049|dbj|BAE57189.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 141/351 (40%), Gaps = 63/351 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ LGGV NVA LGS S +G D++G L ++ GLST G++ ++
Sbjct: 430 ITQSLGGVGHNVAIATKYLGSSVLFCSVVGDDLSGRAALTALRTEGLSTAGVQVLPASNS 489
Query: 61 AVVSNILDVNG---ELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
A + + VN +L A+A + E E+ L + + + + ++VD+N SP
Sbjct: 490 ARTAQYVAVNDAKKDLVMAMADMGIMELPEQKLDFEGFWETLLSRTKPQWVIVDSNWSPE 549
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---------------KYITVVSPNEDE 159
L +A + V FEPVS KS R+ S I++ +PN+ E
Sbjct: 550 VLTKWVAVAKKHGARVAFEPVSNAKSCRLFSKSAEVNAAISPSASVPNNAISLATPNQFE 609
Query: 160 LVAMANALSGENMFRP------ID---------RNKHSAESLFQTLK---PAILVLLEKG 201
L M A +F ID R++ A + Q + P + L
Sbjct: 610 LTTMYMAARDSGLFDSEGWWHIIDAMGMSSGGSRDRLVAMTSNQLVDQGIPQQNIQLLPY 669
Query: 202 IRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPA 261
I ++ LGS GVL+ R+ + PY SR A E
Sbjct: 670 IPCLITKLGSQGVLVTQLLRPGDPRLTSPDSAPYILSRAAL--------------ADELV 715
Query: 262 GGSQFFAVHFPALPASV------VRLTGAGDCLVGGTLASISSGLDVMQSV 306
GG + FP PA+V V + GAGD L+G ++ + G ++ V
Sbjct: 716 GG--VYMRLFP--PAAVLADEEIVSVNGAGDTLLGAVISGLVKGAKTVEDV 762
>gi|351738777|gb|AEQ61487.1| ribokinase [Sus scrofa]
Length = 323
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 52 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTEDAATGTAS 111
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ IS A V++ ++P + IA
Sbjct: 112 II--VNNEGQNIIVIVAGANLLLNTEDLREAASTISRAKVMICQLEVTPATSLEALTIAH 169
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + RP D +
Sbjct: 170 SNGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLEVRRPKDAGQ-- 220
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A VLLE+G +V++TLG++G ++ S+
Sbjct: 221 ----------AAQVLLERGCCVVIITLGAEGCVMLSR 247
>gi|389572294|ref|ZP_10162379.1| ribokinase [Bacillus sp. M 2-6]
gi|388427875|gb|EIL85675.1| ribokinase [Bacillus sp. M 2-6]
Length = 281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ YMI +G D G ++ + ++ G+ T ++ ++++
Sbjct: 25 VPGGKGANQAVASARLGADVYMIGRVGDDAYGQDIMSNLQAQGVRTTYMKPVTEMESGTA 84
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TP +++ + + ++++ + + A C I
Sbjct: 85 HIIL---AEGDNSIVVVKGANNEVTPHYVKDALSSLEDIGIVLIQQEIPEETIEAVCAIC 141
Query: 124 AECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALS 168
+E IPV P K S++I YIT PNE E M + L+
Sbjct: 142 SEKGIPVILNPAPARKVSQQILDQAAYIT---PNEHEAALMFDGLT 184
>gi|396498674|ref|XP_003845289.1| similar to IdgA domain protein [Leptosphaeria maculans JN3]
gi|312221870|emb|CBY01810.1| similar to IdgA domain protein [Leptosphaeria maculans JN3]
Length = 801
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKDID 59
+N LGGVA N+A+ + LGS + SA+G D++G + G+ST GI K
Sbjct: 437 INQTLGGVAHNIAKAVHLLGSNVRLHSAVGDDLSGRAAVSQLLEEGMSTAGIETLPKPAR 496
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPD-WIRQFIHHISSASVLMVDANLSPPALAA 118
TA + + N +L+ A+A + +E F S SV + DAN S AL
Sbjct: 497 TAQYVAVNNANKDLSLAMADMSILENFSQEKISTTISSTLSSQPSVFVADANWSSTALHT 556
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKYIT---------------VVSPNEDELVAM 163
+ + FEPVS K+ RI I+ +++PN EL A+
Sbjct: 557 WLQAFRHPSTTTIFEPVSTAKALRIFPSTSSISTKGTKPHVYPTPLADIITPNTYELTAL 616
Query: 164 -ANALS 168
++ALS
Sbjct: 617 HSHALS 622
>gi|406669713|ref|ZP_11076977.1| hypothetical protein HMPREF9707_00880 [Facklamia ignava CCUG 37419]
gi|405582526|gb|EKB56522.1| hypothetical protein HMPREF9707_00880 [Facklamia ignava CCUG 37419]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 63/304 (20%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV RNVAE + +LG ++S G D + + + ++ ++ D T+ S
Sbjct: 95 VGGVGRNVAENLGRLGMDITLLSVAGNDQDYQYIKQQSEPY-INLNKVKLYSDQSTSAYS 153
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD GE+ A+A + SI + +WI +++ +S+AS ++VD N+ + ++
Sbjct: 154 AILDTEGEMRYALADM-SIADQMNREWINEYLSILSNASYIIVDLNVQKEVIEELLNLSK 212
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + PVS K + ++ + + N+DE N +G + S E
Sbjct: 213 QSGAKLIIVPVSGPKMSHLPKHLEGLDWLIVNQDESEVYFNLEAG----------QESTE 262
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
L L+ G++ VV+T G +P
Sbjct: 263 QLAHR-------WLDCGVQHVVITSGK---------------------RP---------- 284
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
+ Y+ E ++ A+ P P +VV +TGAGD G + GL +
Sbjct: 285 -------TVYTNQQE-----EYLAIQPPLQP-NVVDVTGAGDSNAAGIIYGCIHGLSAQE 331
Query: 305 SVAV 308
S+ +
Sbjct: 332 SIEL 335
>gi|220930586|ref|YP_002507495.1| ribokinase [Clostridium cellulolyticum H10]
gi|220000914|gb|ACL77515.1| ribokinase [Clostridium cellulolyticum H10]
Length = 311
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
++ GG N A + KLG+ M+ A+G D G+I ++ K+ G+ T I R ++T +
Sbjct: 36 FIPGGKGANQAYALGKLGADVTMLGAVGNDSYGDIQIDGLKAVGVDTTHIARINGVNTGI 95
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+++VN ++ V+ K+++ ++I + + I + +++ + + + K
Sbjct: 96 A--LINVNEHGDNSIIVVQGANKYVSKEYIDRNLKVIEESDIVIFQLEIPIETVTYAAKK 153
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E V +P ++ + ++ PNE ELV +
Sbjct: 154 AKELGKTVILDPAPAPDDLP-AELLSNVDIIKPNETELVKLT-----------------G 195
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
E + + A+ + ++G++ V++TLG G + ++
Sbjct: 196 IEEVDSCISKAVDSIKKQGVKTVIVTLGGKGSFVSAQ 232
>gi|451977439|ref|ZP_21927522.1| sugar kinase [Vibrio alginolyticus E0666]
gi|451929675|gb|EMD77409.1| sugar kinase [Vibrio alginolyticus E0666]
Length = 309
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +K+G+ M++ +G DM + + +++S G++T+ + + + V
Sbjct: 38 GGKGANQAVAAAKMGADVVMVTKVGDDMFADNTIRNFQSYGINTQYVSKVPQTSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN ++ ++ FL P I + + S++++ + + A+ + +
Sbjct: 97 -IFVNSTSQNSILIIKGANDFLKPADIDKAESTLVECSLIVLQLEVPLETVYAAIEFGNK 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P I + V PNE EL + N +P++ K
Sbjct: 156 HNIPVLLNPAPAVPELDIEYACRCDFFV-PNETELEILVN--------KPVETVKQ---- 202
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+K A +LL KG+ +++T+GS G L SK+
Sbjct: 203 ----IKEAATILLNKGLNNIIVTMGSKGALWLSKD 233
>gi|225875016|ref|YP_002756475.1| ribokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792309|gb|ACO32399.1| ribokinase [Acidobacterium capsulatum ATCC 51196]
Length = 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 68/302 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ Y +S +G+D G+I ++ AG+ T+ +RR T +
Sbjct: 42 GGKGTNQAIAAARLGAETYFLSKIGMDAFGHIAEAAYREAGVRTDFLRRDPHAATGAAAI 101
Query: 66 IL-DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L D +GE A V+ + LT I I+ ++ + L P + + +A
Sbjct: 102 LLDDASGENAIVVSPGSA--SALTTAEIDAAHEAIARSACFLTQCELPLPLVRHALGLAR 159
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+P P S++ V+PNE E A AL+G P+
Sbjct: 160 SLGVPTVLNPAPAVAGAE--SLLPLCDFVTPNEHE----AQALTG----LPV-------- 201
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
S + A VLL +G R +LTLG+ G + S L
Sbjct: 202 STLAEAEAAADVLLARGARHAILTLGARGAYVKSATLKQ--------------------- 240
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVM 303
H PA A VV TGAGD G A+++ G+ V+
Sbjct: 241 -------------------------HIPAFDAGPVVDTTGAGDAFNAGFAAALAEGMGVI 275
Query: 304 QS 305
++
Sbjct: 276 RA 277
>gi|50344890|ref|NP_001002117.1| ribokinase [Danio rerio]
gi|47938011|gb|AAH71473.1| Ribokinase [Danio rerio]
Length = 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 35/271 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N +++G+K M+ +G D+ GN ++++K+ G+ST + + + T S
Sbjct: 40 FGGKGANQCVQAARMGAKTAMVCKVGRDVFGNDYIQNFKNNGISTAYVEQTEKAATGAAS 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ GE A+ V L + +++ I +A VL+ +SP A + K+A
Sbjct: 100 IIVNDTGE--NAIVIVAGANLLLGQEELQRAQSAIINAKVLVCQLEISPDASLQALKMAR 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E ++ F P + + K V NE E A L+G ++ S E
Sbjct: 158 ENHVKTIFNPAPAI-AYLDSDFYKASDVFCCNESE----AEMLTGLSV--------TSVE 204
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
Q L LL KG V++TLGS G ++C KT + + ++
Sbjct: 205 DACQVG----LELLNKGCASVIVTLGSQGCVVCQS---------TNKTPKHIPTIEVTAA 251
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
T+ S + GA+ F+ H+PA+P
Sbjct: 252 DTTGAGDS-FIGALA------FYMAHYPAMP 275
>gi|407977760|ref|ZP_11158596.1| ribokinase [Bacillus sp. HYC-10]
gi|407415622|gb|EKF37210.1| ribokinase [Bacillus sp. HYC-10]
Length = 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ YM+ +G D G ++ + ++ G+ T ++ D+++
Sbjct: 36 VPGGKGANQAVASARLGADVYMVGRVGDDAYGQDIIRNLQAQGVRTTYMKPVTDMESGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL E ++ V+ +TP ++ + + I ++++ + + A C I
Sbjct: 96 HIIL---AEGDNSIVVVKGANNEVTPHYVNEALSSIEDIGMVLIQQEIPEETVEAVCAIC 152
Query: 124 AECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALS 168
+E IPV P + S++I YIT PNE E M + L+
Sbjct: 153 SEKGIPVILNPAPARQVSQQILDQAAYIT---PNEHEAALMFDGLT 195
>gi|310790683|gb|EFQ26216.1| indigoidine synthase A like protein [Glomerella graminicola M1.001]
Length = 797
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 131/344 (38%), Gaps = 52/344 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSK--PYMISALGLDMAGNILLEHWKSAGLSTEGIRR---- 54
++ +GGV NVA ++ + S +G D+AG +L +++GL T IR+
Sbjct: 438 ISQSIGGVGHNVALAAHRVSKDISVRLCSLIGDDVAGATVLSSLEASGLETTYIRQLTSD 497
Query: 55 -QKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
TA + D L A+A + PD+ + + + L+VD N SP
Sbjct: 498 YHVSNRTAQYVAVNDAEKNLVMAMADMGIFANHSFPDYWKSAVAG-AKPRWLVVDGNWSP 556
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY----------ITVVSPNEDELVAM 163
+ A + E V FEPVS KS + ++ I + SPN EL AM
Sbjct: 557 KDIRAWIQAGREHACKVAFEPVSTAKSTGLFPRGQHPHLGVFPEPGIDMASPNHYELTAM 616
Query: 164 ANALSGENMFRP------IDR-NKHSAESLFQTLK---------PAILVLLEKGIRLVVL 207
+A F ID H A F L P + L I +V
Sbjct: 617 YDAAKENGFFETPEWFEVIDAFGMHGARERFVYLTSREMTDAGVPVQTIHLLPYIPTIVT 676
Query: 208 TLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFF 267
LGS GVLL + L K P R+ + + +R A P G +
Sbjct: 677 KLGSKGVLLTTI---------LSKDDPRLKDRNEERWLLTRAR------ADHPTIGGVYM 721
Query: 268 AVHFPA---LPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAV 308
+ PA VV + G GD +G +A +S G V + V
Sbjct: 722 RLFPPAETVAAEDVVSVNGVGDTFLGVMVAGLSKGGKVEDLIGV 765
>gi|188590086|ref|YP_001922128.1| sugar kinase, ribokinase family [Clostridium botulinum E3 str.
Alaska E43]
gi|188500367|gb|ACD53503.1| sugar kinase, ribokinase family [Clostridium botulinum E3 str.
Alaska E43]
Length = 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
++LGG RN+A ++KL Y IS G D+ G L+ K + I+ + I
Sbjct: 90 HLLGGAGRNIALALTKLEIPNYFISVFGDDLNGEKFLDDAKENNMD---IQYCEKIKGEA 146
Query: 63 VSNILDVNGELAAAVASVESIEKF--LTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
S+ + +N + ++ ++ + +TP +I + + I+ + ++D NL +
Sbjct: 147 TSSFISINDSAGNRIVGIDDMDIYHNITPMFIEKNLDKINHSDYCIIDTNLPKDTIDY-- 204
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
I + P+ + VS+ KS R+ + ++ I ++ EL + + L+
Sbjct: 205 -IYEKVTAPLVIKTVSLNKSYRLINNIEKIEILIITPKELFQLISELN------------ 251
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + AI +LL KG++ V++ L S + +K
Sbjct: 252 ----ETYTNISNAIDILLNKGVKNVLVFLASKYLFFKNK 286
>gi|425064916|ref|ZP_18468036.1| Ribokinase [Pasteurella multocida subsp. gallicida P1059]
gi|404384631|gb|EJZ81064.1| Ribokinase [Pasteurella multocida subsp. gallicida P1059]
Length = 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF + I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFANKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTPGKMVAGFR 242
>gi|359408261|ref|ZP_09200732.1| sugar kinase, ribokinase [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356676671|gb|EHI49021.1| sugar kinase, ribokinase [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 308
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARN+AE +++LGS +I+ LG D + + L D + +
Sbjct: 41 GGVARNIAENLARLGSAVQLITGLGDDGFSASIRKSLNLPLLDISLCYSASDSPSDSYLS 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ D GEL AV ++ + + LTP +++ F I +++++ D NL P +
Sbjct: 101 MYDRTGELINAVNQMQLVNQ-LTPTYLQPFEQQIRKSALIIADCNLPPETIH-------- 151
Query: 126 CNIPVWFEPVSVTKSRRITSV-VKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
W +S S + V +K IT + P D++ + N+ A
Sbjct: 152 -----WLADLSKRPSLFVDGVSMKKITRLKPFLDQIDGLKC-------------NRQEAA 193
Query: 185 SLFQTL---KPAILV--LLEKGIRLVVLTLGSDGVLL 216
+L + + P LV L ++GI V+L+LG++GV L
Sbjct: 194 ALLEFVVQTPPDQLVDSLHQRGIETVLLSLGAEGVYL 230
>gi|378774779|ref|YP_005177022.1| ribokinase [Pasteurella multocida 36950]
gi|356597327|gb|AET16053.1| ribokinase [Pasteurella multocida 36950]
Length = 306
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF + I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFANKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLMQLDMITPNETE----TEILTGVKVV-----DEHSASQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTPGKMVAGFR 242
>gi|255526499|ref|ZP_05393409.1| PfkB family kinase [Clostridium carboxidivorans P7]
gi|255509818|gb|EET86148.1| PfkB family kinase [Clostridium carboxidivorans P7]
Length = 222
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGV RN+ E + K+ + +I+ +G D+ GN ++E ++ GL E + T+
Sbjct: 92 LGGVGRNIGENLRKMDVETKLITVIGNDVYGNKIIEEGRNIGLDMEHSLVLHEQPTSTYL 151
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL 111
IL+ G++ A+A ++ +E+ +T ++I++ H I +AS+ ++D N+
Sbjct: 152 CILNEKGDMQVAIAYMDILEQ-MTVEFIQKKKHVIDNASICVIDTNI 197
>gi|326204738|ref|ZP_08194593.1| PfkB domain protein [Clostridium papyrosolvens DSM 2782]
gi|325985109|gb|EGD45950.1| PfkB domain protein [Clostridium papyrosolvens DSM 2782]
Length = 322
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S+L M+ +G DM G+ LL+ K AG++T+ I R + +AV +
Sbjct: 41 GGKGANQAVQASRLDVNVTMVGKIGTDMFGDQLLKTIKDAGINTDNILRDETCSSAVSNI 100
Query: 66 ILDV-NGELAAA-VASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+V G+ A + V LT D + I+ ++++ + A
Sbjct: 101 ILEVARGKKAKNRIIVVPGANMKLTVDDVEFLREKITEYDLVILQLEIPLEVNKTVIDFA 160
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+PV S ++ +T +SPNE E A L+G I K+
Sbjct: 161 YAKGVPVMLN--SAPYQELDDDLLSKLTYISPNEHE----AYGLTG------IKTTKNDG 208
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELL 222
+ ++ A LL KG++ V++TLGS+GV +K++
Sbjct: 209 SIDTEKVEKAANALLAKGVKNVIITLGSNGVAFMNKDMF 247
>gi|328957887|ref|YP_004375273.1| GntR family transcriptional regulator [Carnobacterium sp. 17-4]
gi|328674211|gb|AEB30257.1| putative transcriptional regulator with a sugar kinase domain, GntR
family [Carnobacterium sp. 17-4]
Length = 395
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID----- 59
+GGVARNVAE + +L K + S G D WK +E K +D
Sbjct: 113 VGGVARNVAENLGRLEEKVMLFSVAGNDA-------EWKMIESHSEHFMNIKAVDSIEGC 165
Query: 60 -TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
T ++ V+G++ +A V+ +K +TPDWI + + + + +++D N +
Sbjct: 166 PTGTFMEVIGVDGKMVLGLAEVDIFDK-MTPDWINKHLSVLKRSKYIIIDLNCPKETIEF 224
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
A + +P+ VSV + + S ++ I V+ E A N + + D
Sbjct: 225 LISFAVKYEVPIALLTVSVQRLSNLPSYLEGINVLITKCSETEAHFNMI-----IKTDDD 279
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
K + E K V + KG + DGV
Sbjct: 280 LKEAVEKWLNNGKGPEHVFVSKGSTKIAYGSQKDGV 315
>gi|255948218|ref|XP_002564876.1| Pc22g08640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591893|emb|CAP98152.1| Pc22g08640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 793
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDTA 61
LGGV NVA + +GS S + D++G L + LSTEGIR TA
Sbjct: 431 LGGVGHNVAVAANYVGSDVLFCSVIADDLSGRAALSTLEKEDLSTEGIRVLPATPSTRTA 490
Query: 62 VVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
I D+ +L A+A VE E L D + + + + ++VDAN P +A
Sbjct: 491 QYIAINDIKKDLVVAMADMGIVELPESQLDFDGFWEPLLERTKPNWVVVDANWRPDVIAK 550
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRI----------------TSVVKYITVVSPNEDELVA 162
+A + V FEPVS KSRR+ T I++ PN EL A
Sbjct: 551 WSAVARKHGARVAFEPVSTAKSRRLFGSDANSTGATISSNQTVPDNAISLACPNRLELTA 610
Query: 163 M 163
M
Sbjct: 611 M 611
>gi|311115032|ref|YP_003986253.1| ribokinase family sugar kinase [Gardnerella vaginalis ATCC 14019]
gi|385801346|ref|YP_005837749.1| HTH domain protein [Gardnerella vaginalis HMP9231]
gi|415703397|ref|ZP_11459275.1| transcriptional regulator [Gardnerella vaginalis 284V]
gi|415704952|ref|ZP_11460223.1| transcriptional regulator [Gardnerella vaginalis 75712]
gi|415706911|ref|ZP_11461758.1| transcriptional regulator [Gardnerella vaginalis 0288E]
gi|417556074|ref|ZP_12207134.1| HTH domain protein [Gardnerella vaginalis 315-A]
gi|310946526|gb|ADP39230.1| ribokinase family sugar kinase [Gardnerella vaginalis ATCC 14019]
gi|333393187|gb|AEF31105.1| HTH domain protein [Gardnerella vaginalis HMP9231]
gi|333603098|gb|EGL14520.1| HTH domain protein [Gardnerella vaginalis 315-A]
gi|388051674|gb|EIK74698.1| transcriptional regulator [Gardnerella vaginalis 75712]
gi|388052857|gb|EIK75872.1| transcriptional regulator [Gardnerella vaginalis 284V]
gi|388053911|gb|EIK76856.1| transcriptional regulator [Gardnerella vaginalis 0288E]
Length = 382
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGV RN+A + ++ ++ ++S G D G + GL ++ D T
Sbjct: 88 VRYALGGVGRNIAVALERMNTRVSLVSVYGGDHNGELFKVDASVNGLEIGYSKQLPDAMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI ++TPD++R+ I I +A ++ +D N+S + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDYMTPDFLRERISIIENADIVALDTNISQKSFEWVC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ P+ ++ K+ RI S + I + + E + AL+G +D
Sbjct: 207 D---NYHRPIMVRAITDAKAPRILSRLHCIDTLILDTAE----SQALTG---ICAVDE-- 254
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+S + K VLL++G+ V + G +GV
Sbjct: 255 ---KSAVRCAK----VLLKRGVGHVFVNSGREGV 281
>gi|126303611|ref|XP_001380558.1| PREDICTED: ribokinase-like [Monodelphis domestica]
Length = 347
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 38/272 (13%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D G+ +E+ K +STE + + KD T S
Sbjct: 75 FGGKGANQCVQAARLGAKTSLVCKVGKDSFGSDYIENLKRNDISTEFMYQTKDAATGAAS 134
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L D +R+ IS A V++ +SP + +A
Sbjct: 135 II--VNNEGQNIIVIVAGANLLLNSDDLRKAADIISRAKVIICQLEISPATSLEALTMAR 192
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ + F P T + SV V NE E A L+G + P K
Sbjct: 193 KSGVKTVFNPAPATADLDAQFYSVSD---VFCCNESE----AEILTGLKISSPAVAGKAG 245
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
+ VL+E+G ++V++TLGS+G + S E I +K +
Sbjct: 246 S------------VLIERGCKIVIITLGSEGCVFVSAEEPGPKHIPTQK---------IL 284
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL 274
K V + + GA+ F+ ++P L
Sbjct: 285 KPVDTTGAGDSFVGAL------AFYLAYYPNL 310
>gi|417852403|ref|ZP_12497993.1| ribokinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338216947|gb|EGP02886.1| ribokinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 306
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF + I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFANKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDIITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK----ELLSSMRIGLRKTKPYG 236
A + +KGI V++TLGS GV K ++++ R+ + T G
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGAPGKIVAGFRVDAKDTTAAG 252
>gi|168180217|ref|ZP_02614881.1| ribokinase [Clostridium botulinum NCTC 2916]
gi|226948895|ref|YP_002803986.1| ribokinase [Clostridium botulinum A2 str. Kyoto]
gi|182669098|gb|EDT81074.1| ribokinase [Clostridium botulinum NCTC 2916]
gi|226844007|gb|ACO86673.1| ribokinase [Clostridium botulinum A2 str. Kyoto]
Length = 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++L S M+S +G D+ G ++++K+ G++T+ + QK+ + V
Sbjct: 36 FGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGVNTDFVTVQKNQASGVAP 95
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D E ++ ++ K L+P I + S++++ + + + A
Sbjct: 96 IFVD--RESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFAN 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ NI V P TK V K V PNE EL + N S
Sbjct: 154 KNNISVLLNPAPATKELDFNYVYKCDFFV-PNETELEILTN---------------KSVN 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ + +K A ++ +KG++ V++T+GS G+L +K+
Sbjct: 198 TIGE-IKEAAHLIGDKGVKNVIVTMGSKGLLWINKD 232
>gi|417271196|ref|ZP_12058545.1| carbohydrate kinase, PfkB domain protein [Escherichia coli 2.4168]
gi|425115577|ref|ZP_18517379.1| pseudouridine kinase [Escherichia coli 8.0566]
gi|425120305|ref|ZP_18522004.1| pseudouridine kinase [Escherichia coli 8.0569]
gi|386234896|gb|EII66872.1| carbohydrate kinase, PfkB domain protein [Escherichia coli 2.4168]
gi|408568257|gb|EKK44290.1| pseudouridine kinase [Escherichia coli 8.0566]
gi|408569268|gb|EKK45268.1| pseudouridine kinase [Escherichia coli 8.0569]
Length = 150
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALA 150
>gi|410955562|ref|XP_003984420.1| PREDICTED: ribokinase [Felis catus]
Length = 322
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTQDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R+ IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIIIVAGANLLLNTEDLREAAKAISRAKVMICQLEVTPETSLEALTMAH 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + P D K
Sbjct: 169 SNGVKTLFNPAPAIADLDPRFYALSD---VFCCNETE----AEILTGLTVSSPADAGK-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A VLLE+G ++V++TLG++G ++ S+
Sbjct: 220 ----------AAQVLLERGCQVVIITLGAEGCVMLSQ 246
>gi|425765848|gb|EKV04494.1| hypothetical protein PDIP_87180 [Penicillium digitatum Pd1]
Length = 622
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDTA 61
LGGV NVA + +GS S + D++G L + GLST GI+ TA
Sbjct: 260 LGGVGHNVAVAANYVGSDVLFCSVIADDLSGRAALSTLEKEGLSTAGIQVLPATPSTRTA 319
Query: 62 VVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
I DV +L A+A +E E + D + + + + ++VDAN P +A
Sbjct: 320 QYIAINDVKKDLLIAMADMGIIELSESQIDFDGFWEPLLERTKPTWVVVDANWRPDVIAK 379
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRI----------------TSVVKYITVVSPNEDELVA 162
+A + V FEPVS KSRR+ T I++ PN EL A
Sbjct: 380 WSAVARKHGARVAFEPVSTAKSRRLFGSDASSTGPTIGPNQTVPDNTISLACPNRLELAA 439
Query: 163 MANA---------------LSGENMFRPIDRNKH---SAESLFQTLKPAILVLLEKGIRL 204
M A ++ NM R + ++ SL P V L I
Sbjct: 440 MYTAARESLLFESAGWWHIINSMNMSPTGSRERLIAITSLSLVDEGLPQQTVQLLPFIPC 499
Query: 205 VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGG- 263
+V LG G LL R+ ++ PY +R + G+ P GG
Sbjct: 500 IVTKLGGAGALLTQLLPPGDPRLTDPESAPYILAR-------------AWPGSDVPFGGV 546
Query: 264 -SQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+ F+ +V + AGD L+G +A ++
Sbjct: 547 YMRLFSPDIILDAEDIVSVNAAGDTLLGVVVAGLA 581
>gi|387929199|ref|ZP_10131876.1| sugar kinase, ribokinase family protein [Bacillus methanolicus PB1]
gi|387586017|gb|EIJ78341.1| sugar kinase, ribokinase family protein [Bacillus methanolicus PB1]
Length = 306
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KLGSK M++ +G D+ + +++ KS G+ TE + + V
Sbjct: 37 GGKGANQAVAAAKLGSKVMMVTKVGDDIFADNTIKNLKSYGIDTEFTSKVPGTPSGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E + ++ + L P+ + + + S++++ + + + + +
Sbjct: 97 FVD--PESRNRILIIKGANQHLLPEDVDRSAEKLKKCSLIVLQLEIPLQTVYHAIEFGNK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P +K V K + PNE EL L+G P++ K
Sbjct: 155 HGIPVILNPAPASKDLDFKYVCKSDFFI-PNESEL----EILTG----MPVENEKQ---- 201
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A L+EKG++ V++T+GS GV+ +KE
Sbjct: 202 ----IREAASTLIEKGLKNVIVTMGSRGVMWVTKE 232
>gi|385799152|ref|YP_005835556.1| PfkB domain-containing protein [Halanaerobium praevalens DSM 2228]
gi|309388516|gb|ADO76396.1| PfkB domain protein [Halanaerobium praevalens DSM 2228]
Length = 380
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR-----RQKDIDT 60
GGV RN+AE + LG + +++A+ D G + E K AG+ + QK T
Sbjct: 98 GGVGRNIAEDLGHLGEEVVLLTAISNDHFGEQIKEETKEAGVDISHFKISSALEQK---T 154
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
V LD NG+L AV + SI K + +++ + I ++S+L+ D NL +A
Sbjct: 155 GVYLAHLDQNGDLIGAVNDM-SILKKIDYEYLNEKRKIIETSSILIFDTNLEADTIAYLL 213
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
++ + + VSV KS ++ ++ + + N DE+
Sbjct: 214 ELCQNKKMKKIADTVSVEKSLKLKGKLENLDYLRGNLDEI 253
>gi|425062834|ref|ZP_18465959.1| Ribokinase [Pasteurella multocida subsp. gallicida X73]
gi|404383540|gb|EJZ79991.1| Ribokinase [Pasteurella multocida subsp. gallicida X73]
Length = 306
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFADKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTPGKMVAGFR 242
>gi|251777780|ref|ZP_04820700.1| sugar kinase, ribokinase family [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082095|gb|EES47985.1| sugar kinase, ribokinase family [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 363
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 24/227 (10%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
++LGG RN+A ++KL Y IS G D+ G L+ K + I+ + I
Sbjct: 90 HLLGGAGRNIALALTKLEIPNYFISVFGDDLNGEKFLDDAKENNID---IQYCEKIKGEA 146
Query: 63 VSNILDVNGELAAAVASVESIEKF--LTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
S+ + +N + ++ ++ + +TP +I + + I+ + ++D NL +
Sbjct: 147 TSSFISINDSAGNRIVGIDDMDIYHNITPMFIEKNLDKINHSDYCIIDTNLPKDTIDY-- 204
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
I + +P+ + VS+ KS R+ S ++ I ++ EL + + L+
Sbjct: 205 -IYEKVTVPLVVKTVSLNKSYRLISNIEKIEILIITPKELFQLISELN------------ 251
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227
+ + AI +LL +G++ V++ S + +K ++I
Sbjct: 252 ----ETYTNISNAIDILLNRGVKNVLVFSASKYLFFKNKSKEYKLKI 294
>gi|425766892|gb|EKV05485.1| hypothetical protein PDIG_83370 [Penicillium digitatum PHI26]
Length = 795
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 130/335 (38%), Gaps = 55/335 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDTA 61
LGGV NVA + +GS S + D++G L + GLST GI+ TA
Sbjct: 433 LGGVGHNVAVAANYVGSDVLFCSVIADDLSGRAALSTLEKEGLSTAGIQVLPATPSTRTA 492
Query: 62 VVSNILDVNGELAAAVAS---VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
I DV +L A+A +E E + D + + + + ++VDAN P +A
Sbjct: 493 QYIAINDVKKDLLIAMADMGIIELSESQIDFDGFWEPLLERTKPTWVVVDANWRPDVIAK 552
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRI----------------TSVVKYITVVSPNEDELVA 162
+A + V FEPVS KSRR+ T I++ PN EL A
Sbjct: 553 WSAVARKHGARVAFEPVSTAKSRRLFGSDASSTGPTIGPNQTVPDNTISLACPNRLELAA 612
Query: 163 MANA---------------LSGENMFRPIDRNKH---SAESLFQTLKPAILVLLEKGIRL 204
M A ++ NM R + ++ SL P V L I
Sbjct: 613 MYTAARESLLFESAGWWHIINSMNMSPTGSRERLIAITSLSLVDEGLPQQTVQLLPFIPC 672
Query: 205 VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGG- 263
+V LG G LL R+ ++ PY +R + G+ P GG
Sbjct: 673 IVTKLGGAGALLTQLLPPGDPRLTDPESAPYILAR-------------AWPGSDVPFGGV 719
Query: 264 -SQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+ F+ +V + AGD L+G +A ++
Sbjct: 720 YMRLFSPDIILDAEDIVSVNAAGDTLLGVVVAGLA 754
>gi|297242905|ref|ZP_06926843.1| sugar kinase, ribokinase family [Gardnerella vaginalis AMD]
gi|415709513|ref|ZP_11463138.1| transcriptional regulator [Gardnerella vaginalis 6420B]
gi|296889116|gb|EFH27850.1| sugar kinase, ribokinase family [Gardnerella vaginalis AMD]
gi|388056185|gb|EIK79061.1| transcriptional regulator [Gardnerella vaginalis 6420B]
Length = 382
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ + T
Sbjct: 88 VRYMLGGVGRNIAVALERLNIRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPESMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ ++ C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSIEWLC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDR 178
P+ V+ K+ R+ S + I ++ E + + NA+ + R +
Sbjct: 207 D---RYRRPIVVRAVTDAKAPRVLSRLSRIDTLILDTAESQALTGINAVDERSAIRCAN- 262
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
VLL++G++ V + G GV
Sbjct: 263 -----------------VLLKRGVKRVFVNAGRAGV 281
>gi|283782817|ref|YP_003373571.1| kinase, PfkB family [Gardnerella vaginalis 409-05]
gi|283441840|gb|ADB14306.1| kinase, PfkB family [Gardnerella vaginalis 409-05]
Length = 382
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ + T
Sbjct: 88 VRYMLGGVGRNIAVALERLNIRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPESMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ ++ C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSIEWLC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDR 178
P+ ++ K+ R+ S + I ++ E + + NA+ + R +
Sbjct: 207 D---RYRRPIIVRAITDAKAPRVLSRLSRIDTLILDTAESQALTGVNAVDERSAIRCAN- 262
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
VLL++G++ V + G GV
Sbjct: 263 -----------------VLLKRGVKRVFVNAGRAGV 281
>gi|421725665|ref|ZP_16164851.1| ribokinase [Klebsiella oxytoca M5al]
gi|410373592|gb|EKP28287.1| ribokinase [Klebsiella oxytoca M5al]
Length = 403
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA-VVS 64
GG N A SK G++ + ++ +G D ++ +H + + + + + + T +
Sbjct: 136 GGKGANQATAASKAGAQVHFVAKVGKDQFSHLAADHLTRSAIHSYTLYQSESEPTGNAII 195
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ NGE A+ S +T I++ I +SS+ VL+V + A + KIA
Sbjct: 196 YVSQENGENMIAIYS--GANTTITYSEIQKIIPELSSSDVLLVQLENNFDATHSLIKIAH 253
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E V P S I + ++ V++PNE E A+ LSG ++
Sbjct: 254 ELGKQVILNPAPY--SAEIIPSIPFVDVITPNETE----ASLLSGIDI------------ 295
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
S F T K A L + G + V++T+GS G LL S +R
Sbjct: 296 SDFDTAKEAALRIARLGAKKVLITMGSRGALLLDNRQFSHIR 337
>gi|421262865|ref|ZP_15713950.1| ribokinase [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401690278|gb|EJS85559.1| ribokinase [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 306
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFADKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGAPGKMVAGFR 242
>gi|415718681|ref|ZP_11467487.1| transcriptional regulator [Gardnerella vaginalis 1500E]
gi|388059723|gb|EIK82441.1| transcriptional regulator [Gardnerella vaginalis 1500E]
Length = 382
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ D T
Sbjct: 88 VRYMLGGVGRNIAVALERLNVRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPDSMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSFEWLC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV---AMANALSGENMFRPID 177
P+ ++ K+ R+ S + I D LV A + AL+G N
Sbjct: 207 D---RYRRPIIVRAITDAKAPRVLSRLSRI-------DTLVLDTAESQALTGINAI---- 252
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ SA LL++G++ V + G GV
Sbjct: 253 -DERSATRCAGA-------LLKRGVKNVFVNAGRAGV 281
>gi|298253297|ref|ZP_06977089.1| sugar kinase, ribokinase family [Gardnerella vaginalis 5-1]
gi|297532692|gb|EFH71578.1| sugar kinase, ribokinase family [Gardnerella vaginalis 5-1]
Length = 366
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ + T
Sbjct: 72 VRYMLGGVGRNIAVALERLNIRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPESMT 131
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ ++ C
Sbjct: 132 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSIEWLC 190
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYIT--VVSPNEDELVAMANALSGENMFRPIDR 178
P+ ++ K+ R+ S + I ++ E + + NA+ + R +
Sbjct: 191 D---RYRRPIVVRAITDAKAPRVLSRLSRIDTLILDTAESQALTGVNAVDERSAIRCAN- 246
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
VLL++G++ V + G GV
Sbjct: 247 -----------------VLLKRGVKRVFVNAGRAGV 265
>gi|268578609|ref|XP_002644287.1| Hypothetical protein CBG14065 [Caenorhabditis briggsae]
Length = 610
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 48/162 (29%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN AE + +L ISA+G D G +H S + + +D+
Sbjct: 370 MGGVARNHAEALGRLSCHSVFISAIGDDQNGKFFRQH------SDQFVESNEDV------ 417
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ A +++DANL P + + +IA
Sbjct: 418 ----------------------------------LECADFILLDANLPVPVMMKTLEIAK 443
Query: 125 ECNIPVWFEPVSVTKSRRI--TSVVKYITVVSPNEDELVAMA 164
+ N VWFEP + K +++ T +V +T SPN +E + A
Sbjct: 444 KHNKRVWFEPTDLDKVKKVFDTGLVGAVTAASPNGNEFLKWA 485
>gi|168213762|ref|ZP_02639387.1| kinase, pfkB family [Clostridium perfringens CPE str. F4969]
gi|170714733|gb|EDT26915.1| kinase, pfkB family [Clostridium perfringens CPE str. F4969]
Length = 321
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 37/220 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE M+++G +S LG D G ++EH K IR D D+ V+
Sbjct: 41 FGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKK-------IRYHMD-DSMVIE 92
Query: 65 N--------ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
ILD NGE+ +A+A ++SI + D+I +A ++D++ +P +
Sbjct: 93 GGSTPTYLAILDENGEMVSAIADMKSIGA-MNTDFIDSKREIFENAEYTVLDSD-NPEIM 150
Query: 117 AASCK-IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP 175
K + N + +PVS K+ + ++K + PN E A L+G F
Sbjct: 151 EYLLKNFKDKTNFIL--DPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPI 201
Query: 176 IDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
D + L A L GI+ V ++L +DG+
Sbjct: 202 TDTDD---------LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|435854514|ref|YP_007315833.1| sugar kinase, ribokinase [Halobacteroides halobius DSM 5150]
gi|433670925|gb|AGB41740.1| sugar kinase, ribokinase [Halobacteroides halobius DSM 5150]
Length = 320
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 37/236 (15%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
N GG N+A + KLG+K ++S +G D G+ L++ +++G+ T GI R +T
Sbjct: 43 NRHFGGSPANIAMNLKKLGAKSGLLSKVGADGLGDYLIKKLETSGVDTRGIVRDSHYNT- 101
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
S +L + + EK++T + I++ + IS A ++ +LS ALAA
Sbjct: 102 --SAVLVTQSKATPEFIAYRDAEKYITKEDIKEGL--ISEAKII----HLSTFALAAP-- 151
Query: 122 IAAECNIPVWFEPVSV-TKSRRITSVVKYITVVSPNEDELVAMANA---------LSGEN 171
E V + K R+I S + PN + N LS N
Sbjct: 152 ----VTRQTLLEIVEIAQKERKIVS-------LDPNYRPQLWEGNKKGQEFIKKLLSKVN 200
Query: 172 MFRPIDRNKHSAESLF--QTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
+ +P + A+++F T K I + G LV+LTLG+DGVL+ + E + +
Sbjct: 201 ITKP---SLDDAKAIFGLATPKEYIQKFHQAGAELVILTLGADGVLVSTGEEIKRL 253
>gi|403069755|ref|ZP_10911087.1| ribokinase [Oceanobacillus sp. Ndiop]
Length = 298
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 25 MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIE 84
MI A+G D G LL H K+ G+ T+G+ + T + S IL N S+
Sbjct: 60 MIGAVGEDTFGKELLSHLKNEGIITDGVLLNAEKPTGIASIILSENDNRIIVAPGANSV- 118
Query: 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTK-SRRI 143
+TPDWI Q I + V+++ + ++ + KIA E ++PV P S I
Sbjct: 119 --VTPDWIDQHKQIIQQSDVVLMQLEIPMESVMHTIKIANEHSVPVVLNPAPFQSISSEI 176
Query: 144 TSVVKYITVVSPNEDE 159
V Y+T PN+ E
Sbjct: 177 IDGVSYLT---PNDLE 189
>gi|452840310|gb|EME42248.1| hypothetical protein DOTSEDRAFT_54669 [Dothistroma septosporum
NZE10]
Length = 810
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 132/339 (38%), Gaps = 60/339 (17%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDTA 61
LGGV N+A +G+ + SA+G D+ G LE +A +S GI+ + TA
Sbjct: 448 LGGVGHNMARAAHLMGADVRLCSAVGDDLTGKAALEALAAAEMSIHGIKTFPHESGSRTA 507
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPD----------WIRQFIHHISSASVLMVDANL 111
I D N +L A+A + +E T D W+ Q H + S L +D N
Sbjct: 508 QYVAINDANKDLVLAMADMSILEAPSTSDSTLPDTFDNFWLPQI--HKAKPSHLAIDGNW 565
Query: 112 SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK----------YITVVSPNEDELV 161
P LA + E N + FEPVS KS + + K + + +PN EL
Sbjct: 566 PPEYLARWLQAGKEANSQILFEPVSKVKSTGLFLLPKPNALSTFPHHSVHIATPNSYELN 625
Query: 162 AMANA------LSGENMFRPIDRN--KHSAESLFQTLK----------PAILVLLEKGIR 203
AM A L ++ + ID H+ + L P + L I
Sbjct: 626 AMYTAARQAFGLERKDWWEVIDAFGIPHTGARVRMALATSSKLVDEGIPQQSIQLLPFIP 685
Query: 204 LVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGG 263
++ LG +GVLL R+ + P+ + SRC + + G
Sbjct: 686 CILTKLGPEGVLLTQILPAGDERLTSGEYAPH---------ILSRCANE----TEKTIGV 732
Query: 264 SQFFAVHFPALP----ASVVRLTGAGDCLVGGTLASISS 298
+ FPA+ VV + G GD G LA +++
Sbjct: 733 GGVYMRLFPAVEDVQAEDVVSVNGVGDTFAGTLLAGLAA 771
>gi|339007359|ref|ZP_08639934.1| ribokinase [Brevibacillus laterosporus LMG 15441]
gi|338776568|gb|EGP36096.1| ribokinase [Brevibacillus laterosporus LMG 15441]
Length = 311
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+++ GG N A ++LG++ MI +LG D G+ L + K G+ I+R ++ T
Sbjct: 35 VHFIPGGKGANQAVACARLGAQTSMIGSLGRDAFGDSLEQAMKQEGIQVSTIKRVENAPT 94
Query: 61 AVVSNILDVNGE-----LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPA 115
+ S IL G+ +A A A + L D ++ +A ++++ +
Sbjct: 95 GIAS-ILLAEGDNQIIVVAGANAHTSMTDVDLHADTVK-------AADIVLLQLEIPIET 146
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP 175
+ + K+A E V P K + YI V++PNE EL +
Sbjct: 147 VVHTAKLAKEAGKTVILNPAPAQKLPD--ELFGYIDVMTPNESELY----------LLTG 194
Query: 176 IDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
+++N+ + ++ T A+ L KG++ VV TLG+ G
Sbjct: 195 LEQNQATDKAT--TRSAAMKALHAKGVKHVVTTLGATG 230
>gi|15602017|ref|NP_245089.1| ribokinase [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720370|gb|AAK02236.1| RbsK [Pasteurella multocida subsp. multocida str. Pm70]
Length = 306
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFADKITQADTLLMQLETPLRAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230
A + +KGI V++TLGS GV K M G R
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTPGKMVAGFR 242
>gi|415728983|ref|ZP_11472280.1| transcriptional regulator [Gardnerella vaginalis 6119V5]
gi|388064734|gb|EIK87257.1| transcriptional regulator [Gardnerella vaginalis 6119V5]
Length = 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y+LGGV RN+A + +L + M+S G D G + + GL ++ D T
Sbjct: 88 VRYMLGGVGRNIAVALERLNVRTSMVSVYGGDHNGELFRIDAAANGLDIGYAKQLPDSMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI +TPD++R+ + I +A +L++D N+ + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDHMTPDFLRERMSIIENADILVLDTNIPQKSFEWLC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV---AMANALSGENMFRPID 177
P+ ++ K R+ S + I D LV A + AL+G N
Sbjct: 207 D---RYRRPIIVRAITDAKDPRVLSRLSRI-------DTLVLDTAESQALTGINAI---- 252
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
++ SA LL++G++ V + G GV
Sbjct: 253 -DERSATRCAGA-------LLKRGVKNVFVNAGRAGV 281
>gi|417853694|ref|ZP_12499048.1| ribokinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219125|gb|EGP04826.1| ribokinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 306
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + + ++ G++T+ + D T +
Sbjct: 38 GGKGANQAVAAARLGANIDFIACIGDDAIGQAMKKAFQQDGINTQAVVEIADQMTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +GE + +A+ +LT + QF I+ A L++ A+ + K+A
Sbjct: 98 QVNAHGENSIVIAA--GANAYLTETVVEQFADKITQADTLLMQLETPLSAVIFAAKLAKS 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N V P ++ + +++PNE E L+G + ++HSA
Sbjct: 156 ANTKVVLNPAPAQPLPD--ELLTQLDMITPNETE----TEILTGVKVV-----DEHSAAQ 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK----ELLSSMRIGLRKTKPYG 236
A + +KGI V++TLGS GV K +++++ R+ + T G
Sbjct: 205 -------AAALFHQKGIETVLITLGSKGVYASQKGTPGKMVAAFRVDAKDTTAAG 252
>gi|331270091|ref|YP_004396583.1| ribokinase [Clostridium botulinum BKT015925]
gi|329126641|gb|AEB76586.1| ribokinase [Clostridium botulinum BKT015925]
Length = 299
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID--TAVV 63
GG N A S++ + MI +G+D G+IL+ K ++TE I + + TA++
Sbjct: 27 GGKGSNQAIACSRMNANVSMIGKVGMDGNGDILVNKLKENNINTEYIFKDDKVSTGTAII 86
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ + N + A S +IE+ + I + + I ++ +++ + + KIA
Sbjct: 87 TVDNEANNSIIVASGSNMTIEE----EEINEASNVIKNSDIVISQFEVPMKTILKGFKIA 142
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
E N P K R ++KY ++ PNE E A L+G + +D K++A
Sbjct: 143 KENNKITILNPAPAKKIDR--ELLKYTDIIIPNETE----AFELTGLEV-TDLDSAKNAA 195
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+L+++GI+ V++TLGS G + KE
Sbjct: 196 N-----------ILMKEGIKCVIITLGSRGAAVIMKE 221
>gi|358053225|ref|ZP_09146996.1| ribokinase family sugar kinase [Staphylococcus simiae CCM 7213]
gi|357257284|gb|EHJ07570.1| ribokinase family sugar kinase [Staphylococcus simiae CCM 7213]
Length = 309
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 23/217 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y GG N A +++LG I A+G D +GN ++ + K +G+ T+ + + ++ T
Sbjct: 34 IEYQPGGKGANQAIALARLGCNVKFIGAVGDDTSGNNMISNLKFSGVDTKYVSKVSEVRT 93
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLM-VDANLSPPALAAS 119
ILD + E + K++ + + + S L+ ++ N S A+ S
Sbjct: 94 GNFIVILDKSAE--NTMLGTLGANKYIDKQQLEKAFEEVKSRYFLLQLETNSS--AIEYS 149
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
K+A E N+ V +P V + +KY+ +++PN+ E A +SG +
Sbjct: 150 LKLAREKNMIVILDPAPVDGYKE--KYLKYVDIITPNQQE----AEKISGIKV------- 196
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
+ ES Q A ++ +KG+ V++ LG G +
Sbjct: 197 -NDKESAIQ----AAHIIYKKGVGNVIVKLGKQGSIF 228
>gi|150951349|ref|XP_001387662.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388519|gb|EAZ63639.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 372
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 65/331 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGV N++ SK +S +G D AG +L KS+ TA S
Sbjct: 22 VGGVGHNISLASHYFLSKSKFVSIVGNDFAGRAILNQLKSSEFDASA--------TAQYS 73
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP-------ALA 117
D +G L A A + IE+ + I Q +S+ ++ D NLSP +L
Sbjct: 74 ATHDSDGNLVVAAADMSIIEEDFSEFVIDQVSPQVSN---IVFDCNLSPTLVNKVMNSLQ 130
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVK------YITVVSPNEDELVAMANALSGEN 171
AS K+ + V EP S+ KS RI ++ +I +++P EL A+ + +
Sbjct: 131 ASNKV-----VNVIIEPTSLPKSSRIAKLINRPFPNNFIKLITPTVSELEAIHASFYNND 185
Query: 172 MFRPIDR-----NKHSAESLFQ--------TLKPAILVLLEKG-----------IRLVVL 207
+ D + +S F+ P + L+++G + +++
Sbjct: 186 KYDDYDEWFPVLDSLGVDSFFRDKLNLLASKRFPVLKDLMDRGTLQQSFQLVPFFQNILI 245
Query: 208 TLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFF 267
+GS G ++ S S + K+ P + YK R G + ++F
Sbjct: 246 KIGSKGAIMVSL----SENVNDYKSIP---TTSKYKPAFILASEGRRMGVV-----IEYF 293
Query: 268 AVHFPALPASVVRLTGAGDCLVGGTLASISS 298
+ ++ +TGAGD ++G +A +S+
Sbjct: 294 PIPMENENLDIINVTGAGDSMLGTLVAQLSN 324
>gi|389816202|ref|ZP_10207365.1| ribokinase [Planococcus antarcticus DSM 14505]
gi|388465195|gb|EIM07514.1| ribokinase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV- 62
V GG N A ++LGS +MI A+G D G LL KS G+ +GI+R ID A
Sbjct: 34 VPGGKGANQAVAAARLGSDVHMIGAVGQDAFGTELLSGLKSEGVQVKGIKR---IDGASG 90
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++NIL G+ V V +T + I F ++++ ++++ + P + + +I
Sbjct: 91 IANILLSEGDNRIIV--VPGANYSVTAEEIASFTEQLAASDLVIMQLEMLIPVIQQTLEI 148
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+ +P P S + Y T ++PNE E A + GEN + ++
Sbjct: 149 CHQNGVPSMLNPAPA--SGFTADFLPYCTYLTPNETE----AEEIFGENWEKALEE 198
>gi|415711734|ref|ZP_11464388.1| transcriptional regulator [Gardnerella vaginalis 55152]
gi|415715918|ref|ZP_11466224.1| transcriptional regulator [Gardnerella vaginalis 1400E]
gi|388057735|gb|EIK80549.1| transcriptional regulator [Gardnerella vaginalis 1400E]
gi|388057850|gb|EIK80663.1| transcriptional regulator [Gardnerella vaginalis 55152]
Length = 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGV RN+A + ++ ++ ++S G D G + GL ++ D T
Sbjct: 88 VRYALGGVGRNIAVALERMNTRVSLVSVYGGDHNGELFKVDASVNGLEIGYSKQLPDAMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI ++TPD++R+ I I +A ++ +D N+S + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDYMTPDFLRERISIIENADIVALDTNISQKSFEWVC 206
Query: 121 KIAAECNIPVWFEPVSVTKSRRITS 145
+ P+ ++ K+ R+ S
Sbjct: 207 D---NYHRPIMVRAITDAKAPRVLS 228
>gi|238881166|gb|EEQ44804.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 339
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 129/322 (40%), Gaps = 79/322 (24%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI---DTA 61
+GGV N+A + +S +G D AG + E S G+ D+ DTA
Sbjct: 22 IGGVGYNIARASGYVCDSTKFVSRVGNDAAGKTIQE-------SVPGL----DVGSGDTA 70
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
++ D +GEL A A + IE+ D ASV + D NLSP ++ +
Sbjct: 71 QYVSMHDSSGELVVACADMSVIEEEFEVD---------HKASVAVYDCNLSPKTVSKALD 121
Query: 122 IAAECNIPVWFEPVSVTKSRRITSV---------VKYIT------------VVSPNEDEL 160
E NI EP S K+RRI + VK IT + +DE
Sbjct: 122 -NNEYNI---IEPTSHVKARRIGEMELAVFPNNKVKLITPTVEELASIYDSMKDQFDDEW 177
Query: 161 VAMANALSGENMFRPIDR---NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLC 217
+ +A+ + + +D+ +K + FQ L P +L K LG DGVLL
Sbjct: 178 FGVLDAMKVDQIRERLDKKWYDKGVYQQCFQLL-PFFQNILVK--------LGKDGVLLV 228
Query: 218 SKELLSSMR--IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
S L S++ + T PY R S YS + ++F V
Sbjct: 229 S--LCSTVEDYKSIPTTSPY------------RPKSIIYSKGNQVGAVVEYFPV---PKD 271
Query: 276 ASVVRLTGAGDCLVGGTLASIS 297
VV +TGAGD LVG A IS
Sbjct: 272 VEVVNVTGAGDTLVGYLAAKIS 293
>gi|50303541|ref|XP_451712.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640844|emb|CAH02105.1| KLLA0B04004p [Kluyveromyces lactis]
Length = 738
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 133/329 (40%), Gaps = 58/329 (17%)
Query: 5 LGGVARNVA--ECMSKLGSKPY--MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+GGV NVA S S+ +ISA+G D+AG +L G+S +GI + T
Sbjct: 389 IGGVGHNVALSANYSNRSSQHQTTLISAVGKDIAGKHIL---SGLGMSADGIYINESERT 445
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISS--ASVLMVDANLSPPALAA 118
A +I +GEL A + ++ + + I+ + + S +V++VDAN+S L
Sbjct: 446 AQYISIHSRDGELYIAGSDMDIVTQL----PIKHITNKLKSLKPNVVLVDANVSVEVLEH 501
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKY-------ITVVSPNEDELVAMANALSGEN 171
+ + + FEP S K+++I +++P EL + AL N
Sbjct: 502 LITLREKMGFKLIFEPTSECKAQKIAQAKNLKVYPNHGFDLITPTVTELKGIYEALDKNN 561
Query: 172 MFR-----------PIDRN-----KHSAESLFQTLKPAIL----VLLEKGIRLVVLTLGS 211
F IDRN K S L L I LL R+V+ GS
Sbjct: 562 KFDLDNWFPVLDSFKIDRNLSVNKKASTGELKYLLDNGIFQTASFLLPYFPRMVI-KHGS 620
Query: 212 DGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHF 271
G+ + S E + T P + ++ S Y G Q V
Sbjct: 621 KGIYIFSME---------KDTDPATL-----ELISKYSDYSMYCTGEHVGGQQQGVLVEH 666
Query: 272 PALPA---SVVRLTGAGDCLVGGTLASIS 297
A+PA +V +TGAGD LVG L IS
Sbjct: 667 HAVPAGNTTVTSVTGAGDTLVGILLNEIS 695
>gi|416924715|ref|ZP_11932904.1| ribokinase [Burkholderia sp. TJI49]
gi|325526559|gb|EGD04112.1| ribokinase [Burkholderia sp. TJI49]
Length = 308
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 31/256 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ M++ +G D+ + + +++ G+ T +R+ + + V
Sbjct: 38 GGKGANQAVAAARLGARVVMVTKVGDDVFADNTIRNFEREGIDTAHVRKVAGVPSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + + ++ V+ + LTP I + +++++ + + + + A
Sbjct: 97 -IFVEPDSSNSILIVKGANRHLTPADIDAAAPKLVECALIVLQLEIELDTVYHAIEFGAR 155
Query: 126 CNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P V+ RI SV ++ PNE EL +SG + P D +
Sbjct: 156 HRIPVLLNPAPAVADLDFERIRSVEFFV----PNETELA----IVSGMPVDSP-DTAARA 206
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE---LLSSMRIGLRKTKPYGFSR 239
AES L+ +G++ V++TLG G LL S+E + +R+ R T G
Sbjct: 207 AES-----------LVARGLKHVIVTLGDQGSLLVSREGVRRVPGVRVDARDTTGAG--- 252
Query: 240 DLYKTVTSRCHSSRYS 255
D Y +RC+++ +
Sbjct: 253 DAYIGCFARCYAASHD 268
>gi|305662700|ref|YP_003858988.1| ribokinase [Ignisphaera aggregans DSM 17230]
gi|304377269|gb|ADM27108.1| ribokinase [Ignisphaera aggregans DSM 17230]
Length = 316
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 66/298 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A C ++LG+K YMI +G D+ G L+ SAG++ + + ++ T +
Sbjct: 38 GGKGANQAVCAARLGAKTYMIGRVGKDIFGERALQSLASAGVNIDYVAIDEEAHTGIAFI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ GE AVA + ++ + + I I + L++ + + + KIA
Sbjct: 98 LLNTAGENMIAVAP--GTDYRVSERDVDRAIDVIKQSDSLLLQLEIPINTVVYAAKIAYR 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ V P + + YI V+ PN E A L+ + D K E
Sbjct: 156 HGVRVLLNPAPAMALPK--ELYSYIDVLVPNRTE----AEMLTSIKINSIDDAVKAGRE- 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L+ G+ V++T+G+ G ++ SK+
Sbjct: 209 -----------LIGMGVENVIITMGNRGAVIVSKD------------------------- 232
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVM 303
F H PA VV TGAGD V +S G+D++
Sbjct: 233 ---------------------FYHHVPAFKVDVVDTTGAGDVFVAALGVFLSRGMDIV 269
>gi|342216931|ref|ZP_08709578.1| HTH domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587821|gb|EGS31221.1| HTH domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 364
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAG-LSTEGIRRQKDIDTAVVS 64
GGV RN+AE +++L ++ YMI LG D G +++ G LS E + V
Sbjct: 93 GGVGRNIAENLARLSNQVYMICMLGDDQWGKAIMDQGSLGGHLSYEKAYILPGRQSPVYL 152
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD N ++ A+ + +E+ LT + Q I +AS +++D NL +LA
Sbjct: 153 EILDENKDMLTAINDMTLVEE-LTQARLAQHKRFIENASYVVLDTNLPQESLAYLLD--- 208
Query: 125 ECNIPVWF--EPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+P + + VS K +I + + ++ NE E A+A P D +
Sbjct: 209 --KVPQKYLVDGVSGIKVMKIKDHLDKVHLLKVNEYEAAALAG-------LDPQDDQDYP 259
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
L +T LL+KG+ +V+T G +G
Sbjct: 260 --KLAKT-------LLKKGLSYLVITCGKEG 281
>gi|295097187|emb|CBK86277.1| Sugar kinases, ribokinase family [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 395
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 67/301 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV-VS 64
GG N A +SK K + + +G D + EH S+ + + + + KD T +
Sbjct: 135 GGKGANQALAVSKCNVKTHFVGKVGNDQFSQMAFEHLSSSAIDSFTLYQDKDQKTGTALI 194
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ +GE A++ + +T D + + +A + + + PA + +IA
Sbjct: 195 YVCQSDGENMIAISP--GANRSITADEVEAITPEVKNADIFLTQLENNLPATFRAIEIAR 252
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P S + S +K + ++PNE E A+ LSG ++ +D
Sbjct: 253 RNGIKVVLNPAPW--SSDVVSCLKNVDFLTPNETE----ASLLSGIHI---VD------- 296
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+ K A + KG+ V++T+G+ G L+
Sbjct: 297 --LASAKEAARAIKAKGVGHVIITMGAKGALIYD-------------------------- 328
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
G QF +H PAL A V TGAGD G A+++ G ++Q
Sbjct: 329 ------------------GEQF--IHIPALKAVCVDTTGAGDAFNGAFAAAMAKGESIIQ 368
Query: 305 S 305
+
Sbjct: 369 A 369
>gi|452991683|emb|CCQ96980.1| Ribokinase [Clostridium ultunense Esp]
Length = 310
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 98/244 (40%), Gaps = 29/244 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VNY GG N A ++LGSK MI +G D +G LL K G+ T G+ KDI
Sbjct: 33 VNYYGGGKGANQAIAAARLGSKVSMIGKVGEDRSGQALLAALKREGIDTTGVEVSKDITG 92
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHH---ISSASVLMVDANLSPPALA 117
N+ + GE V + + IRQ H I ++ V ++ + +
Sbjct: 93 TAFINVSN-KGENNIVVYPGANRDL-----GIRQIERHREIIENSKVCVLQLEIPYEVVK 146
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPID 177
+ E + V F P +K ++ ++ PNE EL +A GE + P
Sbjct: 147 YVVNLCYEKGVKVVFNPAPASKEIE-DELISKTHILIPNETELAILA----GEYKYSP-- 199
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRIGLRKTKP 234
+ L+ + KG +++TLG G L SK E S ++ L T
Sbjct: 200 ----------KKLEEIADRVYNKGCENLIITLGDKGGLYISKDKREYFESKKVDLVDTTA 249
Query: 235 YGFS 238
G S
Sbjct: 250 AGDS 253
>gi|415712759|ref|ZP_11464917.1| ribokinase family sugar kinase [Gardnerella vaginalis 55152]
gi|388056656|gb|EIK79515.1| ribokinase family sugar kinase [Gardnerella vaginalis 55152]
Length = 303
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++GSK M++ +G D+ + +++ G+ ++ + R T+ V+
Sbjct: 37 GGKGANQAVAASRMGSKVLMVTRVGNDVFAENTINNFEKNGIDSKFVMRTD--ATSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ + ++ V+ LTP+ + + IS ++++ + + A+ K+ AE
Sbjct: 95 IF-VDPQSRNSIIIVKGANAKLTPNDVEKARSEISKCKLIVLQLEIPLETVYATIKMGAE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV P + + + ++ + PNE EL + L+G P+D +
Sbjct: 154 LGVPVLLNPAPADPALSLEN-IRNCEFIVPNESEL----SLLTG----MPVDTS------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + A +LL+ GI V++TLGS G LL + E
Sbjct: 199 --EDITNAARMLLQSGIPNVIVTLGSKGALLVNSE 231
>gi|418599872|ref|ZP_13163348.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21343]
gi|374395945|gb|EHQ67200.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21343]
Length = 372
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL+ C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALSFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|374374778|ref|ZP_09632436.1| ribokinase [Niabella soli DSM 19437]
gi|373231618|gb|EHP51413.1| ribokinase [Niabella soli DSM 19437]
Length = 309
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++++G +S +G D+ G + + G+ T + + + + V
Sbjct: 40 GGKGANQAVAVARMGGDALFVSKVGNDVFGRQSSQLFNEEGIDTRFMLSDEVLPSGVALI 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D GE + V S + L D+ + ++ + ++L++ + + K AA
Sbjct: 100 TVDQKGE-NSIVVSQGANNSLLPADFTSEVLNELEQCNMLLMQFEIPMETILFIAKYAAS 158
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NI V P V +++Y+ +++PNE E A L+G + R+ SA+
Sbjct: 159 RNIKVVVNPAPVQDIP--AELLQYVHIITPNETE----AGLLTGTKV-----RSLASAQQ 207
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLS 223
A +++EKG+ +V++TLG+ G L+C +S
Sbjct: 208 -------AAKMIMEKGVPIVIITLGAQGALVCENGRMS 238
>gi|210620593|ref|ZP_03292141.1| hypothetical protein CLOHIR_00084 [Clostridium hiranonis DSM 13275]
gi|210155307|gb|EEA86313.1| hypothetical protein CLOHIR_00084 [Clostridium hiranonis DSM 13275]
Length = 305
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 21/230 (9%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A + KLG MI A+G D AG ILL + KS + T GI K+ T
Sbjct: 39 VPGGKGANQAYAIGKLGGDVAMIGAVGDDDAGQILLNNLKSVNVDTRGIESIKENVTGQA 98
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+D NG+ V S + D I + + I + +++ + + IA
Sbjct: 99 YIYVDANGQNCITVIS--GANAVVDRDMIDRNMELIDDSEYIVMQLEVPVDTVKYVKNIA 156
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
V +P K+ + ++ K ++ PNE EL L+G+ +
Sbjct: 157 VSKGKKVIIDPAPAIKNPDV-NLWKGCYIIKPNELELA----TLTGKELNN--------- 202
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
+ K A+ L + G+ V+ TLG DG ++ + L S +KTK
Sbjct: 203 ---IKEYKEAVTELHKTGVDYVISTLGGDGAIMHDGKNLKSFD--CKKTK 247
>gi|150018888|ref|YP_001311142.1| ribokinase [Clostridium beijerinckii NCIMB 8052]
gi|149905353|gb|ABR36186.1| ribokinase [Clostridium beijerinckii NCIMB 8052]
Length = 299
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 20/219 (9%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
N GG N A + +LGS M+ +G D+ G LE +S + + G+ +K I +
Sbjct: 34 NTFPGGKGGNQAIALGRLGSDVLMVGKIGEDIYGKRYLEVLRSNNVKSHGVSIEKGISSG 93
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
V ++ V+ + + V + ++I I A + + + A+ K
Sbjct: 94 VA--VIQVSNKGENNIIVVPGANAEVDINYIESKWSLIERADIFLFQLEIPLETAIATMK 151
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ V +P + KY+ ++PNE EL + I RN +
Sbjct: 152 KLKKQGKTVILDPAPALDLP--DEIFKYVDYLTPNETELETL------------IGRNIN 197
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
S E+L + K L +KG++++V LGSDG + K+
Sbjct: 198 SEENLVEAAK----TLFDKGVKVIVAKLGSDGAAIIKKD 232
>gi|253682287|ref|ZP_04863084.1| PfkB domain protein [Clostridium botulinum D str. 1873]
gi|253561999|gb|EES91451.1| PfkB domain protein [Clostridium botulinum D str. 1873]
Length = 311
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 46/239 (19%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG ARN+AE M++LG +I+ +G D+ G + + ++AG+ +A +
Sbjct: 39 GGAARNIAENMARLGLNTKLITVIGDDVFGYKIKKDCENAGIDLSYANTILGEKSATYIS 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D NG++ + + I K T D+I+ I SA ++++ +P
Sbjct: 99 LIDGNGDMQVGLTDLH-IRKEYTIDFIKTRIEVFKSAQIIVI----TPE----------- 142
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN------MFRPIDRN 179
+P+ +++YI P+ + +A+ EN +F I N
Sbjct: 143 --VPI--------------EIIRYIHKNCPSVSIMADVASVDLAENVKKNFGVFHTIKAN 186
Query: 180 KHSAESLF-------QTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
H +L + L+ A L++KG R+ + T+GS GV +K+ + +RI RK
Sbjct: 187 NHEILALTGIKVTDDKKLEEAADYLIKKGTRVCLFTMGSKGVFYKNKD-GTVIRISTRK 244
>gi|304317163|ref|YP_003852308.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778665|gb|ADL69224.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 315
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
VNY GG N A ++KLG MI +G D G L+E+ + GI K T
Sbjct: 33 VNYSFGGKGANQAVAIAKLGGNVTMIGRVGDDNFGKELIENLDKQKVKPSGIEIDKTEKT 92
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + GE +V + K L + I + + +A + ++ + + +
Sbjct: 93 GMAFIYVSDKGENNISVN--QGANKKLDVEQINRHLDLFDAAEICVLQLEIPIETVKYAI 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
+I + NI V P +R+I ++K I +++PNE EL + L+ +N+ D N
Sbjct: 151 EICNKKNIKVILNPAP---ARKIPEEILKNIYILTPNESEL----SILTKKNVKTIEDIN 203
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
S +LLE G++ ++ TLG G L +K
Sbjct: 204 NASE------------ILLESGVQNIITTLGEKGCFLKNK 231
>gi|225563142|gb|EEH11421.1| IdgA domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 749
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 137/342 (40%), Gaps = 66/342 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSA--GLSTEGIRRQKDIDTAV 62
LGGV NVA + GS + S + D++G L K+ L +GI+ +
Sbjct: 377 LGGVGHNVALAANYAGSSVLLCSVVADDLSGRAALSGLKNCQPNLQVQGIQVLNPATGSR 436
Query: 63 VSNILDVNGELA------AAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
S + VN E A +A +E+ E+ L D + + + + S +++DAN SP +
Sbjct: 437 TSQYVSVNDERKNLMLAMADMAIMETPEQHLDFDTLWRPLIQSARPSWIVIDANWSPDVI 496
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRR----------------ITSVVKYITVVSPNEDEL 160
A +A + FEPVS KS R IT I +V+PN EL
Sbjct: 497 AKWISLAKSHGAKIAFEPVSNEKSTRLFTRSLSNSKSIIQPSITIPNHSIDLVTPNRHEL 556
Query: 161 VAMANALSGENMFRPID---------------RNKHSAESLFQTLKPAILVLLEKGIRL- 204
AM +F + R++ + + Q + I ++ IRL
Sbjct: 557 TAMYTTARESGLFESAEWWQVINSLEMPSNGSRDRLVSATNSQLVDEGI---PQQSIRLL 613
Query: 205 -----VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAME 259
++ LG GVLL ++L LR S D + SR + +G
Sbjct: 614 PFIPCIITKLGPKGVLLT--QILPHDDERLR-------SADYACYILSRSYGGSSNG--- 661
Query: 260 PAGGSQFFAVHFPALP----ASVVRLTGAGDCLVGGTLASIS 297
P GG + FP +VV + GAGD L+G +A ++
Sbjct: 662 PVGG--VYMRLFPPEEVLGDKNVVSVNGAGDTLLGVIVAGLA 701
>gi|148705435|gb|EDL37382.1| ribokinase [Mus musculus]
Length = 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + +D T S
Sbjct: 52 FGGKGANQCVQAARLGAKAAIVCKVGNDSFGNDYIENLKQNHISTEFTYQTRDAATGTAS 111
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ IS A V++ +SP A + +A
Sbjct: 112 II--VNNEGQNIIVIVAGANLLLNSEDLKKAASVISRAKVMICQLEISPAASLEALTMAR 169
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P ++ NE E A L+G + P K
Sbjct: 170 RSGVKTLFNPAPAMADLD-PQFYTLSSIFCCNESE----AEILTGHAVSDPTTAGK---- 220
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A ++LLE+G ++VV+TLG+ G ++ S+
Sbjct: 221 --------AAMILLERGCQVVVITLGASGCVILSQ 247
>gi|261823353|ref|YP_003261459.1| ribokinase [Pectobacterium wasabiae WPP163]
gi|261607366|gb|ACX89852.1| ribokinase [Pectobacterium wasabiae WPP163]
gi|385873819|gb|AFI92339.1| Ribokinase [Pectobacterium sp. SCC3193]
Length = 403
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 118/301 (39%), Gaps = 67/301 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA-VVS 64
GG N A S+ G++ Y I+ +G D +H+ ++ + + + + T +
Sbjct: 136 GGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIHSFKLYQSDSEPTGNAII 195
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ NGE A+ + +T D + ++++ VL+V + A + K+A
Sbjct: 196 YVSQQNGENMIAIHP--GANQTITDDEVAAIASELTTSDVLLVQLENNFSATLNAIKLAH 253
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
V P S I + Y+ V++PNE E A+ LSG ++ +D K +A
Sbjct: 254 TLGKKVILNPAPY--SSEILPYLDYLDVITPNETE----ASLLSGIDI-HDVDDAKEAA- 305
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
LK A L G + V++T+GS G LL
Sbjct: 306 -----LKIAAL-----GAKRVIITMGSRGALLLD-------------------------- 329
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
G QF H PA PA V TGAGD G A++++G ++Q
Sbjct: 330 ------------------GKQF--QHIPAFPALGVDTTGAGDAFNGAFAAALANGQSLVQ 369
Query: 305 S 305
+
Sbjct: 370 A 370
>gi|322698504|gb|EFY90274.1| IdgA domain protein [Metarhizium acridum CQMa 102]
Length = 788
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYM--ISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID--- 59
+GGV NVA SK + S + DMAG+ ++ + +GL T ++R +
Sbjct: 433 IGGVGHNVALAAHLASSKTKVGFYSMVADDMAGSTVISSLRQSGLDTAHVKRLQSTKHAG 492
Query: 60 --TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
TA I D N L A+A + ++ P+ R + ++S L+VD N + ++
Sbjct: 493 SRTAQYVAINDANRNLVMAMADMGIFTQYSFPEEWRSTVK-VTSPRWLVVDGNWNASSVR 551
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYI-----------TVVSPNEDELVAM--- 163
I + N V FEPVSV KS+ + + + I + SPN EL +M
Sbjct: 552 EWVSIGKDHNAKVAFEPVSVAKSKSLFTNQRGIPKLDIFPHASVDMASPNTYELASMYEI 611
Query: 164 ---ANALSGENMFRPID-------RNKH---SAESLFQTLKPAILVLLEKGIRLVVLTLG 210
L ++ F+ ID R++ ++ L P V L I ++ LG
Sbjct: 612 AKENGYLDSQDWFKVIDAFGMTGARDRFVRLTSADLTDAGVPVQCVNLLPYIPTLLTKLG 671
Query: 211 SDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVH 270
+GVLL S R+ R + Y +R S H P G + +
Sbjct: 672 PNGVLLTSILGRDDPRLRDRDAEEYILAR------ASPNH---------PTVGGIYMRLF 716
Query: 271 FPALPA-SVVRLTGAGDCLVGGTLASISSG------LDVMQSVAV 308
PA ++V + GAGD +G ++ ++ G +DV Q AV
Sbjct: 717 PPAEKVENIVSVNGAGDTFLGVLVSGLAQGGSVDKLIDVAQMGAV 761
>gi|340521971|gb|EGR52204.1| hypothetical protein TRIREDRAFT_54283 [Trichoderma reesei QM6a]
Length = 1395
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 144/351 (41%), Gaps = 53/351 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMI--SALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
++ +GGV NVA + + + S +G D+AG +L +++GL + +++
Sbjct: 420 ISQSIGGVGHNVALAAHRASRQAQVKFSSMVGDDVAGATVLTALEASGLDSTYVKKLNQA 479
Query: 59 D-----TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
+ TA I D + L A+A + + L P+ + I + L+VD N SP
Sbjct: 480 EHPGSRTAQYVAINDSSKNLVMAMADMGIFTQHLFPEEWKSAIK-ATDPKWLVVDGNWSP 538
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-----------YITVVSPNEDELVA 162
+ + A E V FEPVSV KS+ + + + + SPN EL A
Sbjct: 539 KGIRTWIQAANEHGSKVAFEPVSVAKSKSLFGPQRGVPSLGVFPNQSVDLASPNIYELSA 598
Query: 163 MANA------LSGENMFRPIDR-NKHSAESLFQTLKPAIL---------VLLEKGIRLVV 206
M +A L + F ID A F L A L + L I ++
Sbjct: 599 MYSAAKENGYLDSMDWFEVIDSFGMRGARDRFVRLTSAELTDAGVPVQSIQLLPYIPTII 658
Query: 207 LTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQF 266
LGS GVLL + L K P R+ + + +R Y G PA G +
Sbjct: 659 TKLGSKGVLLTTI---------LGKDDPRLRDRESEEFILTRS----YDG--NPAVGGIY 703
Query: 267 FAVHFPALP--ASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVY 315
+ FP + ++V + G GD +G ++ ++ G V + V V VY
Sbjct: 704 MRL-FPPVEHVENIVSVNGVGDTFLGVLVSGLAQGGRVDKLVDVAQRGAVY 753
>gi|312870596|ref|ZP_07730710.1| HTH domain protein [Lactobacillus oris PB013-T2-3]
gi|311093871|gb|EFQ52201.1| HTH domain protein [Lactobacillus oris PB013-T2-3]
Length = 359
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGG+ RN+A + +LG +I+ G D G I G++ ++ ++ T+
Sbjct: 94 LGGIGRNIAANLVELGINTNLITVFGHDANGEIFKNDSVKRGINISYSKQISEVPTSNYV 153
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I D+NG+ V + SI +TPD+++ + I+++++++ D N+ + +
Sbjct: 154 YINDMNGDRVIGVDDM-SINNNITPDFLKSRLPGINASNIVIFDTNIPSETIDW---LYQ 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG----ENMFRPIDRNK 180
++P+ + VSVTK VK + S N D LV N + G + +D +
Sbjct: 210 NVSVPMIAKSVSVTK-------VKNLIHDSINLDSLV--INGIEGTILTKQQIENVDDAR 260
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
+ A+ L++ I + ++ + L T L SKE+
Sbjct: 261 NCAKELYKIFHAQIFLYVDD-LGLFTYTADHRKTTLYSKEI 300
>gi|15926012|ref|NP_373545.1| hypothetical protein SA0299, partial [Staphylococcus aureus subsp.
aureus N315]
gi|13700225|dbj|BAB41523.1| SA0299 [Staphylococcus aureus subsp. aureus N315]
Length = 253
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|416353881|ref|ZP_11681598.1| PfkB family kinase [Clostridium botulinum C str. Stockholm]
gi|338195476|gb|EGO87752.1| PfkB family kinase [Clostridium botulinum C str. Stockholm]
Length = 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 46/239 (19%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG ARN+AE M++LG +I+ +G D+ G + + ++AG+ +A +
Sbjct: 39 GGAARNIAENMARLGLNTKLITVIGDDVFGCKIKKDCENAGIDLSYANTILGEKSATYIS 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D NG++ + + I K T D+I+ I SA ++++ +P
Sbjct: 99 LIDGNGDMQVGLTDLH-IRKEYTIDFIKTRIEVFKSAQIIVI----TPE----------- 142
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN------MFRPIDRN 179
+P+ +++YI P+ + +A+ EN +F I N
Sbjct: 143 --VPI--------------EIIRYIHKNCPSVSIMADVASVDLAENVKKNFGVFHTIKAN 186
Query: 180 KHSAESLF-------QTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
H +L + L+ A L++KG R+ + T+GS GV +K+ + +RI RK
Sbjct: 187 NHEILALTGIKVTDDKKLEEAADYLIKKGTRVCLFTMGSKGVFYKNKD-GTVIRISTRK 244
>gi|421079888|ref|ZP_15540824.1| Putative ribokinase [Pectobacterium wasabiae CFBP 3304]
gi|401705375|gb|EJS95562.1| Putative ribokinase [Pectobacterium wasabiae CFBP 3304]
Length = 403
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 118/301 (39%), Gaps = 67/301 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA-VVS 64
GG N A S+ G++ Y I+ +G D +H+ ++ + + + + T +
Sbjct: 136 GGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIHSFKLYQSDSEPTGNAII 195
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ NGE A+ + +T D + ++++ VL+V + A + K+A
Sbjct: 196 YVSQQNGENMIAIHP--GANQTITDDEVAAIASELTTSDVLLVQLENNFSATLNAIKLAH 253
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
V P S I + Y+ V++PNE E A+ LSG ++ +D K +A
Sbjct: 254 TLGKKVILNPAPY--SSEILPYLDYLDVITPNETE----ASLLSGIDI-HDVDDAKEAA- 305
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
LK A L G + V++T+GS G LL
Sbjct: 306 -----LKIAAL-----GAKRVIITMGSRGALLLD-------------------------- 329
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
G QF H PA PA + TGAGD G A++++G ++ Q
Sbjct: 330 ------------------GKQF--QHIPAFPALGIDTTGAGDAFNGAFAAALANGQNMAQ 369
Query: 305 S 305
+
Sbjct: 370 A 370
>gi|404448614|ref|ZP_11013607.1| ribokinase [Indibacter alkaliphilus LW1]
gi|403766235|gb|EJZ27110.1| ribokinase [Indibacter alkaliphilus LW1]
Length = 302
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG I+ LG D+ GN LE++K G+ T IR+ + V
Sbjct: 41 GGKGANQAVAAARLGGSVAFITQLGTDVFGNTSLENFKKEGIDTSRIRQNPHQPSGVALI 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D +GE VA L + I+ ++ AS++++ + + AS ++A +
Sbjct: 101 TVDGHGENTIIVAP--GANNHLREEDIQAAENYFLEASIVLIQLEIPLQVVLASVQMAKK 158
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P S+ + +++PNE E+ LSG + +D
Sbjct: 159 YGKKLILNPAPA--SQLSAEYYDGLYMITPNETEI----ELLSG---IKIVDE------- 202
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
++ K A VL KG + +V+TLG+ G + S+E
Sbjct: 203 --RSAKSAAAVLASKGAQHIVITLGASGAYVYSEEF 236
>gi|212528878|ref|XP_002144596.1| IdgA domain protein [Talaromyces marneffei ATCC 18224]
gi|210073994|gb|EEA28081.1| IdgA domain protein [Talaromyces marneffei ATCC 18224]
Length = 811
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 142/357 (39%), Gaps = 93/357 (26%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR----------- 53
LGGV NVA + +GSK S + D++G L + GL T GI+
Sbjct: 445 LGGVGYNVAIAANYIGSKTLFCSVVADDLSGKAALAGIEHEGLGTTGIQILSPSLGMRTA 504
Query: 54 -------RQKDI-----DTAVV---SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHH 98
+KD+ D A++ N LD+ G + VA P+WI
Sbjct: 505 QYVAINDSKKDLFIAMADMAIMELPENELDMEGFWGSIVAQAR-------PNWI------ 551
Query: 99 ISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRI--------------- 143
+VD N +P +A ++ + V FEPVS K+ R+
Sbjct: 552 -------VVDGNWNPAVMAKWIELGPKVGARVAFEPVSTAKATRLFTQLAEGKTSGIIGP 604
Query: 144 --TSVVKYITVVSPNEDELVAMANALSGENMFR---------PIDRNKHSAESLFQTLKP 192
T + +V+PNE EL++M + + +F ++ + + L ++
Sbjct: 605 SDTVPRSKVDLVAPNELELISMYSTARDKGLFESPEWWNIINELNLSAAGSRDLLVSVTS 664
Query: 193 AILV---LLEKGIRL------VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
LV + ++ I+L +++ LG GVLL +LL R R T P D
Sbjct: 665 PSLVDAGIPQQSIQLLPFIPSLLIKLGPQGVLLT--QLLP--RGDARLTSP-----DYAP 715
Query: 244 TVTSRCHSSRYSGAMEPAGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS 298
+ SR S SG E GG + F VV + GAGD L+G +A ++S
Sbjct: 716 YIISRTPLSVPSGN-ELVGGVYMRLFPPETVLADQDVVSVNGAGDTLLGVVVAGLAS 771
>gi|416845552|ref|ZP_11906051.1| carbohydrate kinase [Staphylococcus aureus O46]
gi|323443467|gb|EGB01083.1| carbohydrate kinase [Staphylococcus aureus O46]
Length = 372
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|416840368|ref|ZP_11903629.1| carbohydrate kinase [Staphylococcus aureus O11]
gi|323440299|gb|EGA98013.1| carbohydrate kinase [Staphylococcus aureus O11]
Length = 372
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|221142218|ref|ZP_03566711.1| hypothetical protein SauraJ_11397 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|384860953|ref|YP_005743673.1| sugar kinase [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|302750182|gb|ADL64359.1| sugar kinase [Staphylococcus aureus subsp. aureus str. JKD6008]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|373464881|ref|ZP_09556384.1| ribokinase [Lactobacillus kisonensis F0435]
gi|371761652|gb|EHO50254.1| ribokinase [Lactobacillus kisonensis F0435]
Length = 305
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 23/226 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A S+LGSK IS +G D G L ++K + T G+ A
Sbjct: 39 FGGKGANQAVAASRLGSKVSFISMVGNDTFGKQQLANFKENHIDTTGVSIGTKSSGAAP- 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ V + ++ LTP+ + ++I I + ++++ + + +A
Sbjct: 98 --IFVEPTSDNRILIIKGANNELTPEVLDRYIDLIKNTKIIVLQQEIPLETNYHAIDLAN 155
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ NIPV P + I V K + SPNE EL + + +D K +A+
Sbjct: 156 QFNIPVLLNPAPANEDLDINHVSK-VDFFSPNETELATLTGMPTNN-----LDEIKRAAK 209
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRI 227
+++ G++ +++TLGS GVL SK EL+ ++++
Sbjct: 210 H-----------MIDLGVKNMMVTLGSKGVLWVSKDSGELVPAVKV 244
>gi|418283798|ref|ZP_12896537.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21202]
gi|365166327|gb|EHM57994.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21202]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|449299854|gb|EMC95867.1| hypothetical protein BAUCODRAFT_148731 [Baudoinia compniacensis
UAMH 10762]
Length = 805
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 147/378 (38%), Gaps = 64/378 (16%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKD 57
++ LGGV NVA +G + + SA+G D++G + ++GLS +
Sbjct: 440 ISQSLGGVGHNVARAAHLMGGRVRLCSAVGDDLSGKATHDSLTASGLSPAAVMIMPSSTG 499
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI-------SSASVLMVDAN 110
+ T+ + D +L A+A V ++ D I + + ++A L+VDAN
Sbjct: 500 LRTSQYIAVNDAERDLVLAMADVSILDDAAGDDAINEAFDELWQPQLSMTNACQLVVDAN 559
Query: 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK----------YITVVSPNEDEL 160
S L ++ + + V FEPVS K R+ + K + + +PN EL
Sbjct: 560 WSAKHLVRWLQVGKKYGLRVTFEPVSNLKGARLFQLPKPHSLSVFPMASVHLTTPNAYEL 619
Query: 161 VAMANALSGENMFRPID------------RNKHSAESLFQTLK------PAILVLLEKGI 202
AM +A F D +A +L T + P + L I
Sbjct: 620 TAMYHAARASGAFDRQDWWSVIDALGIPSSGARTAMALATTSELVDRGIPQQSIQLLPFI 679
Query: 203 RLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAG 262
+ LG++GVLL R+ + P+ + SRC +G E G
Sbjct: 680 PCICTKLGAEGVLLTQLLPAGDARLTSGQYAPH---------ILSRC----VNGTEESLG 726
Query: 263 -GSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASISSG---------LDVMQSVAVD 309
G + + PA VV + G GD G +A +++ +D+ Q AV
Sbjct: 727 VGGVYMRLFSPAEIVDNEDVVSVNGVGDTFAGTLVAGLATRGKDTPIEELIDLAQRAAVL 786
Query: 310 DAKTVYAAANVLFYQSML 327
K+ + A L SML
Sbjct: 787 TLKSKESVATGLGTLSML 804
>gi|387779482|ref|YP_005754280.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus LGA251]
gi|344176584|emb|CCC87042.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus LGA251]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|415683366|ref|ZP_11448599.1| hypothetical protein CGSSa00_01331 [Staphylococcus aureus subsp.
aureus CGS00]
gi|315194766|gb|EFU25155.1| hypothetical protein CGSSa00_01331 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|15923301|ref|NP_370835.1| carbohydrate kinase-like protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|49482543|ref|YP_039767.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|148266734|ref|YP_001245677.1| ribokinase-like domain-containing protein [Staphylococcus aureus
subsp. aureus JH9]
gi|150392775|ref|YP_001315450.1| ribokinase-like domain-containing protein [Staphylococcus aureus
subsp. aureus JH1]
gi|156978639|ref|YP_001440898.1| hypothetical protein SAHV_0308 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253316588|ref|ZP_04839801.1| hypothetical protein SauraC_10665 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005105|ref|ZP_05143706.2| hypothetical protein SauraM_01520 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424455|ref|ZP_05600884.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427124|ref|ZP_05603526.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429760|ref|ZP_05606147.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432406|ref|ZP_05608769.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus E1410]
gi|257435366|ref|ZP_05611417.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M876]
gi|258413569|ref|ZP_05681844.1| PfkB domain-containing protein [Staphylococcus aureus A9763]
gi|258421307|ref|ZP_05684234.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9719]
gi|258424635|ref|ZP_05687512.1| PfkB domain-containing protein [Staphylococcus aureus A9635]
gi|258439055|ref|ZP_05690146.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9299]
gi|258444291|ref|ZP_05692625.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8115]
gi|258447170|ref|ZP_05695320.1| PfkB domain-containing protein [Staphylococcus aureus A6300]
gi|258448628|ref|ZP_05696741.1| PfkB family carbohydrate kinase [Staphylococcus aureus A6224]
gi|258455865|ref|ZP_05703820.1| PfkB domain-containing protein [Staphylococcus aureus A5937]
gi|269201958|ref|YP_003281227.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282893469|ref|ZP_06301702.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8117]
gi|282902894|ref|ZP_06310787.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus C160]
gi|282907294|ref|ZP_06315142.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282907637|ref|ZP_06315479.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912544|ref|ZP_06320340.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913167|ref|ZP_06320959.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus M899]
gi|282921606|ref|ZP_06329324.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C427]
gi|282922794|ref|ZP_06330484.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C101]
gi|282926421|ref|ZP_06334053.1| PfkB family carbohydrate kinase [Staphylococcus aureus A10102]
gi|283768042|ref|ZP_06340957.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus H19]
gi|283959745|ref|ZP_06377186.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293498216|ref|ZP_06666070.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511810|ref|ZP_06670504.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M809]
gi|293550420|ref|ZP_06673092.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus M1015]
gi|295405581|ref|ZP_06815391.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|295426843|ref|ZP_06819482.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275057|ref|ZP_06857564.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus MR1]
gi|297245488|ref|ZP_06929356.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8796]
gi|379020097|ref|YP_005296759.1| Pseudouridine kinase [Staphylococcus aureus subsp. aureus M013]
gi|384863665|ref|YP_005749024.1| pfkB family carbohydrate kinase family protein [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|387149495|ref|YP_005741059.1| sugar kinase in cluster with indigoidine synthase indA , PfkB
family of kinases [Staphylococcus aureus 04-02981]
gi|415692405|ref|ZP_11454366.1| hypothetical protein CGSSa03_03772 [Staphylococcus aureus subsp.
aureus CGS03]
gi|417652042|ref|ZP_12301798.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21172]
gi|417653779|ref|ZP_12303507.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21193]
gi|417795709|ref|ZP_12442927.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21305]
gi|417803028|ref|ZP_12450074.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21318]
gi|417887369|ref|ZP_12531497.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21195]
gi|417890683|ref|ZP_12534755.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21200]
gi|417893753|ref|ZP_12537776.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21201]
gi|417898664|ref|ZP_12542583.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21259]
gi|418309207|ref|ZP_12920781.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21194]
gi|418313491|ref|ZP_12924979.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21334]
gi|418316230|ref|ZP_12927671.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21340]
gi|418320639|ref|ZP_12931993.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus VCU006]
gi|418423504|ref|ZP_12996655.1| hypothetical protein MQA_00393 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426446|ref|ZP_12999478.1| hypothetical protein MQC_01469 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429374|ref|ZP_13002311.1| hypothetical protein MQE_01203 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432271|ref|ZP_13005075.1| hypothetical protein MQG_00961 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418435980|ref|ZP_13007803.1| hypothetical protein MQI_00498 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418438878|ref|ZP_13010604.1| hypothetical protein MQK_00173 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418441864|ref|ZP_13013485.1| hypothetical protein MQM_01001 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418444981|ref|ZP_13016478.1| hypothetical protein MQO_01537 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418447933|ref|ZP_13019342.1| hypothetical protein MQQ_00632 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450759|ref|ZP_13022104.1| hypothetical protein MQS_01019 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453773|ref|ZP_13025050.1| hypothetical protein MQU_01654 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456678|ref|ZP_13027896.1| hypothetical protein MQW_00199 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418561478|ref|ZP_13125967.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21262]
gi|418566235|ref|ZP_13130617.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21264]
gi|418567270|ref|ZP_13131634.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21272]
gi|418580984|ref|ZP_13145069.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597837|ref|ZP_13161355.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21342]
gi|418601194|ref|ZP_13164634.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21345]
gi|418638958|ref|ZP_13201228.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-3]
gi|418645593|ref|ZP_13207714.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-55]
gi|418652478|ref|ZP_13214445.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-99]
gi|418662364|ref|ZP_13223916.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-122]
gi|418874354|ref|ZP_13428622.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|418877219|ref|ZP_13431459.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880020|ref|ZP_13434242.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882966|ref|ZP_13437168.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885597|ref|ZP_13439750.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418888227|ref|ZP_13442366.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|418890832|ref|ZP_13444954.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|418893791|ref|ZP_13447894.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418896696|ref|ZP_13450771.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418899614|ref|ZP_13453677.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908033|ref|ZP_13462047.1| marR family protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418913562|ref|ZP_13467536.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916155|ref|ZP_13470119.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418919088|ref|ZP_13473036.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418921940|ref|ZP_13475860.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418930495|ref|ZP_13484345.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418950855|ref|ZP_13502995.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-160]
gi|418981215|ref|ZP_13528931.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418984808|ref|ZP_13532501.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|418990225|ref|ZP_13537888.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|419784234|ref|ZP_14310009.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-M]
gi|421149101|ref|ZP_15608760.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443635368|ref|ZP_21119497.1| winged helix-turn-helix DNA-binding protein [Staphylococcus aureus
subsp. aureus 21236]
gi|443638378|ref|ZP_21122424.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21196]
gi|14246079|dbj|BAB56473.1| probable carbohydrate kinase homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|49240672|emb|CAG39332.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|147739803|gb|ABQ48101.1| PfkB domain protein [Staphylococcus aureus subsp. aureus JH9]
gi|149945227|gb|ABR51163.1| PfkB domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|156720774|dbj|BAF77191.1| hypothetical protein SAHV_0308 [Staphylococcus aureus subsp. aureus
Mu3]
gi|257273473|gb|EEV05575.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276755|gb|EEV08206.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257280241|gb|EEV10828.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257283285|gb|EEV13417.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus E1410]
gi|257285962|gb|EEV16078.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M876]
gi|257839816|gb|EEV64285.1| PfkB domain-containing protein [Staphylococcus aureus A9763]
gi|257842731|gb|EEV67153.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9719]
gi|257845230|gb|EEV69267.1| PfkB domain-containing protein [Staphylococcus aureus A9635]
gi|257847931|gb|EEV71927.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9299]
gi|257850550|gb|EEV74498.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8115]
gi|257854183|gb|EEV77136.1| PfkB domain-containing protein [Staphylococcus aureus A6300]
gi|257858259|gb|EEV81147.1| PfkB family carbohydrate kinase [Staphylococcus aureus A6224]
gi|257862077|gb|EEV84850.1| PfkB domain-containing protein [Staphylococcus aureus A5937]
gi|262074248|gb|ACY10221.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282315015|gb|EFB45401.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C101]
gi|282316021|gb|EFB46405.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus C427]
gi|282323267|gb|EFB53586.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus M899]
gi|282324240|gb|EFB54556.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282328542|gb|EFB58813.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330193|gb|EFB59714.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282591750|gb|EFB96821.1| PfkB family carbohydrate kinase [Staphylococcus aureus A10102]
gi|282597353|gb|EFC02312.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus C160]
gi|282764155|gb|EFC04282.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8117]
gi|283461921|gb|EFC09005.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus H19]
gi|283789337|gb|EFC28164.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816034|gb|ADC36521.1| Hypothetical sugar kinase in cluster with indigoidine synthase indA
, PfkB family of kinases [Staphylococcus aureus
04-02981]
gi|290919467|gb|EFD96543.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus M1015]
gi|291097147|gb|EFE27405.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465768|gb|EFF08300.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus M809]
gi|294969656|gb|EFG45675.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|295129295|gb|EFG58922.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297177474|gb|EFH36725.1| PfkB family carbohydrate kinase [Staphylococcus aureus A8796]
gi|312828832|emb|CBX33674.1| pfkB family carbohydrate kinase family protein [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315129954|gb|EFT85943.1| hypothetical protein CGSSa03_03772 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725872|gb|EGG62351.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21172]
gi|329732338|gb|EGG68688.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21193]
gi|334270640|gb|EGL89040.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21305]
gi|334273246|gb|EGL91596.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21318]
gi|341848186|gb|EGS89353.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21259]
gi|341853260|gb|EGS94141.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21201]
gi|341854456|gb|EGS95326.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21200]
gi|341857957|gb|EGS98762.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21195]
gi|359829406|gb|AEV77384.1| Pseudouridine kinase [Staphylococcus aureus subsp. aureus M013]
gi|365226429|gb|EHM67645.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus VCU006]
gi|365235055|gb|EHM75977.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21194]
gi|365235843|gb|EHM76753.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21334]
gi|365241479|gb|EHM82224.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21340]
gi|371970959|gb|EHO88370.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21264]
gi|371977466|gb|EHO94734.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21262]
gi|371981915|gb|EHO99075.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21272]
gi|374393247|gb|EHQ64561.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21342]
gi|374399564|gb|EHQ70703.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21345]
gi|375019584|gb|EHS13136.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021833|gb|EHS15328.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-99]
gi|375022697|gb|EHS16168.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-55]
gi|375036746|gb|EHS29811.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-122]
gi|375375419|gb|EHS79003.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-160]
gi|377697914|gb|EHT22267.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377700308|gb|EHT24647.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377706833|gb|EHT31128.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377708486|gb|EHT32775.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708887|gb|EHT33167.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377712779|gb|EHT36995.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377717192|gb|EHT41369.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377717509|gb|EHT41685.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377724225|gb|EHT48342.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377727683|gb|EHT51786.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377733778|gb|EHT57819.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377733997|gb|EHT58037.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377736480|gb|EHT60496.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377752384|gb|EHT76307.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377756840|gb|EHT80737.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|377757256|gb|EHT81145.1| marR family protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377759605|gb|EHT83486.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377762918|gb|EHT86779.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|377768140|gb|EHT91925.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|377772302|gb|EHT96052.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|383364438|gb|EID41752.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-M]
gi|387721484|gb|EIK09346.1| hypothetical protein MQE_01203 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387721571|gb|EIK09430.1| hypothetical protein MQC_01469 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722806|gb|EIK10586.1| hypothetical protein MQA_00393 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387728160|gb|EIK15657.1| hypothetical protein MQG_00961 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387730062|gb|EIK17473.1| hypothetical protein MQI_00498 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387732032|gb|EIK19282.1| hypothetical protein MQK_00173 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387739080|gb|EIK26093.1| hypothetical protein MQO_01537 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739842|gb|EIK26823.1| hypothetical protein MQQ_00632 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387740206|gb|EIK27166.1| hypothetical protein MQM_01001 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387747507|gb|EIK34214.1| hypothetical protein MQS_01019 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748518|gb|EIK35188.1| hypothetical protein MQU_01654 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749505|gb|EIK36129.1| hypothetical protein MQW_00199 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394331203|gb|EJE57291.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443409385|gb|ELS67880.1| winged helix-turn-helix DNA-binding protein [Staphylococcus aureus
subsp. aureus 21236]
gi|443409657|gb|ELS68151.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21196]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|354468400|ref|XP_003496641.1| PREDICTED: ribokinase-like [Cricetulus griseus]
Length = 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + + T S
Sbjct: 50 FGGKGANQCVQAARLGAKASIVCKVGKDSFGNDYIENLKQNHISTEFTYQTRAAATGAAS 109
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I+D G+ + V L + +++ IS A V++ +SP + +A
Sbjct: 110 IIVDDEGQ--NIIVIVAGANLLLNTEDLKKAASVISRAKVMICQLEISPATSLEALTMAR 167
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P T V+ NE E A L+G + P + K
Sbjct: 168 SSGVKTLFNPAPATADLD-PQFYTLSNVLCCNESE----AEILTGLAVNNPTEAGK---- 218
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A LVLLE+G ++VV+TLG+ G + S+
Sbjct: 219 --------AALVLLERGCQVVVITLGASGCVTLSQ 245
>gi|418560342|ref|ZP_13124861.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21252]
gi|418993040|ref|ZP_13540681.1| marR family protein [Staphylococcus aureus subsp. aureus CIG290]
gi|371972469|gb|EHO89850.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21252]
gi|377748025|gb|EHT71988.1| marR family protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|82750011|ref|YP_415752.1| carbohydrate kinase [Staphylococcus aureus RF122]
gi|384546528|ref|YP_005735781.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus ED133]
gi|417904827|ref|ZP_12548646.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21269]
gi|82655542|emb|CAI79936.1| probable carbohydrate kinase [Staphylococcus aureus RF122]
gi|298693579|gb|ADI96801.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus ED133]
gi|341845848|gb|EGS87048.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21269]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|21282017|ref|NP_645105.1| hypothetical protein MW0288 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485192|ref|YP_042413.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651235|ref|YP_185200.1| carbohydrate kinase [Staphylococcus aureus subsp. aureus COL]
gi|87160990|ref|YP_493025.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194092|ref|YP_498881.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220465|ref|YP_001331287.1| hypothetical protein NWMN_0253 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508581|ref|YP_001574240.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|258453096|ref|ZP_05701089.1| carbohydrate kinase [Staphylococcus aureus A5948]
gi|282922282|ref|ZP_06329973.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9765]
gi|284023320|ref|ZP_06377718.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus 132]
gi|294849958|ref|ZP_06790696.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9754]
gi|379013625|ref|YP_005289861.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus VC40]
gi|386829985|ref|YP_006236639.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387601613|ref|YP_005733134.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus ST398]
gi|404477632|ref|YP_006709062.1| PfkB family carbohydrate kinase [Staphylococcus aureus 08BA02176]
gi|415687055|ref|ZP_11451023.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus CGS01]
gi|417650215|ref|ZP_12299989.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21189]
gi|417799603|ref|ZP_12446739.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21310]
gi|418285246|ref|ZP_12897932.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21209]
gi|418311577|ref|ZP_12923099.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21331]
gi|418317496|ref|ZP_12928915.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21232]
gi|418572008|ref|ZP_13136224.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21283]
gi|418578236|ref|ZP_13142332.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418642357|ref|ZP_13204548.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-24]
gi|418647337|ref|ZP_13209402.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649988|ref|ZP_13212015.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-91]
gi|418656982|ref|ZP_13218765.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660354|ref|ZP_13221983.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-111]
gi|418902563|ref|ZP_13456606.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418905262|ref|ZP_13459289.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418910913|ref|ZP_13464898.1| marR family protein [Staphylococcus aureus subsp. aureus CIG547]
gi|418927607|ref|ZP_13481496.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|418933297|ref|ZP_13487123.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987269|ref|ZP_13534944.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|419774680|ref|ZP_14300638.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus CO-23]
gi|440708217|ref|ZP_20888888.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21282]
gi|440736329|ref|ZP_20915930.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448740074|ref|ZP_21722059.1| PfkB family carbohydrate kinase [Staphylococcus aureus KT/314250]
gi|21203453|dbj|BAB94153.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
gi|49243635|emb|CAG42059.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57285421|gb|AAW37515.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus COL]
gi|87126964|gb|ABD21478.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87201650|gb|ABD29460.1| pfkB family carbohydrate kinase family, putative [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|150373265|dbj|BAF66525.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367390|gb|ABX28361.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257859306|gb|EEV82161.1| carbohydrate kinase [Staphylococcus aureus A5948]
gi|282593408|gb|EFB98403.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9765]
gi|283469551|emb|CAQ48762.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus ST398]
gi|294823092|gb|EFG39523.1| PfkB family carbohydrate kinase [Staphylococcus aureus A9754]
gi|315197989|gb|EFU28321.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus CGS01]
gi|329724233|gb|EGG60746.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21189]
gi|334272918|gb|EGL91270.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21310]
gi|365171033|gb|EHM61914.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21209]
gi|365233688|gb|EHM74631.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21331]
gi|365245373|gb|EHM86015.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21232]
gi|371978013|gb|EHO95270.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21283]
gi|374362322|gb|AEZ36427.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus VC40]
gi|375016849|gb|EHS10483.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-24]
gi|375029208|gb|EHS22538.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-91]
gi|375030196|gb|EHS23519.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-88]
gi|375031814|gb|EHS25077.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-105]
gi|375032353|gb|EHS25601.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-111]
gi|377698134|gb|EHT22484.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377720684|gb|EHT44839.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|377726780|gb|EHT50890.1| marR family protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377740163|gb|EHT64162.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377743576|gb|EHT67555.1| marR family protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377764562|gb|EHT88412.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377773471|gb|EHT97217.1| marR family protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|383971489|gb|EID87563.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus CO-23]
gi|385195377|emb|CCG14985.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|404439121|gb|AFR72314.1| PfkB family carbohydrate kinase [Staphylococcus aureus 08BA02176]
gi|436430096|gb|ELP27460.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505193|gb|ELP41135.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21282]
gi|445549132|gb|ELY17373.1| PfkB family carbohydrate kinase [Staphylococcus aureus KT/314250]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|384868869|ref|YP_005751583.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus T0131]
gi|387141944|ref|YP_005730337.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TW20]
gi|418277393|ref|ZP_12891959.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21178]
gi|418872102|ref|ZP_13426454.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-125]
gi|418948313|ref|ZP_13500625.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-157]
gi|418953779|ref|ZP_13505765.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-189]
gi|424784149|ref|ZP_18210965.1| Pseudouridine kinase [Staphylococcus aureus CN79]
gi|269939831|emb|CBI48200.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TW20]
gi|329313004|gb|AEB87417.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus T0131]
gi|365173476|gb|EHM64038.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21178]
gi|375367534|gb|EHS71489.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-125]
gi|375372868|gb|EHS76589.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-157]
gi|375374283|gb|EHS77919.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus IS-189]
gi|421957515|gb|EKU09834.1| Pseudouridine kinase [Staphylococcus aureus CN79]
Length = 372
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|418926084|ref|ZP_13479984.1| marR family protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377743461|gb|EHT67442.1| marR family protein [Staphylococcus aureus subsp. aureus CIG2018]
Length = 372
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|385780595|ref|YP_005756766.1| marR family protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|418573696|ref|ZP_13137882.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21333]
gi|364521584|gb|AEW64334.1| marR family protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|371981366|gb|EHO98548.1| carbohydrate kinase, PfkB family [Staphylococcus aureus subsp.
aureus 21333]
Length = 372
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|304380275|ref|ZP_07362995.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304341256|gb|EFM07175.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 97 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 155
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 156 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 214
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 215 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 255
>gi|297209176|ref|ZP_06925575.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911177|ref|ZP_07128626.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH70]
gi|386728089|ref|YP_006194472.1| ribokinase [Staphylococcus aureus subsp. aureus 71193]
gi|418979152|ref|ZP_13526950.1| Ribokinase [Staphylococcus aureus subsp. aureus DR10]
gi|422743840|ref|ZP_16797822.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus MRSA177]
gi|422747432|ref|ZP_16801349.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus MRSA131]
gi|296886109|gb|EFH25043.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887356|gb|EFK82552.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH70]
gi|320139382|gb|EFW31261.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142933|gb|EFW34729.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus MRSA177]
gi|379993090|gb|EIA14538.1| Ribokinase [Staphylococcus aureus subsp. aureus DR10]
gi|384229382|gb|AFH68629.1| Ribokinase [Staphylococcus aureus subsp. aureus 71193]
Length = 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 97 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 155
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 156 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 214
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 215 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 255
>gi|448743646|ref|ZP_21725553.1| PfkB family carbohydrate kinase [Staphylococcus aureus KT/Y21]
gi|445562931|gb|ELY19095.1| PfkB family carbohydrate kinase [Staphylococcus aureus KT/Y21]
Length = 372
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|253735053|ref|ZP_04869218.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH130]
gi|297588945|ref|ZP_06947586.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MN8]
gi|384866070|ref|YP_005746266.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH60]
gi|424777427|ref|ZP_18204392.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus CM05]
gi|253726949|gb|EES95678.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH130]
gi|297577456|gb|EFH96169.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus MN8]
gi|312436575|gb|ADQ75646.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus TCH60]
gi|402346506|gb|EJU81593.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus CM05]
gi|408422807|emb|CCJ10218.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408424795|emb|CCJ12182.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408426784|emb|CCJ14147.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408428772|emb|CCJ25937.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408430760|emb|CCJ18075.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408432754|emb|CCJ20039.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408434743|emb|CCJ22003.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
gi|408436728|emb|CCJ23971.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus ST228]
Length = 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 97 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 155
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 156 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 214
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 215 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 255
>gi|154318730|ref|XP_001558683.1| hypothetical protein BC1G_02754 [Botryotinia fuckeliana B05.10]
Length = 645
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 144/361 (39%), Gaps = 68/361 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGI---RRQK 56
++ +GGV NV +P + + + D AG +L+ +S+GL+T+ I ++
Sbjct: 275 IHSSIGGVGYNVLRAAQLSSKEPVSLYTFIADDQAGKSILQSLQSSGLNTDDITICSKET 334
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHH-----ISSASVLMVDANL 111
D TA I D +L A+A ++ + IR IH SS +++DAN
Sbjct: 335 DYRTAQYVAINDGKKDLVIAMADMDIFARPSNDPSIRT-IHSKLGSLTSSTKWVIIDANW 393
Query: 112 SPPALAA--SCKIAAECNIPVWFEPVSVTKSRRI-----TSVVK----------YITVVS 154
+ S ++ ++ + +EPVS KS R+ +S +K + + +
Sbjct: 394 KSEVIQEFLSATKSSSSSVKIAYEPVSTIKSARLFERPTSSSLKANKLPVFPNNIVDLAT 453
Query: 155 PNEDELVAMANALSGENMFRPI-----------------DRNKH-SAESLFQTLKPAILV 196
PNE EL +M +A + F DR H ++ L P V
Sbjct: 454 PNEHELTSMHDAATSHGKFETDEWWQTIDALGIPSTGARDRFVHMTSRELTDQGIPVKAV 513
Query: 197 LLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSG 256
L I ++ LGS GVLL S S R+ PY + SRC +
Sbjct: 514 QLLPYIPTILTKLGSQGVLLTSILSPSDPRLRDPDHAPY---------ILSRC-----TN 559
Query: 257 AMEPAGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG-------LDVMQSVA 307
E GG + F V VV + G GD +G ++ ++ G +DV Q A
Sbjct: 560 GNEEVGGVYMRLFPVVEKVEEGDVVSVNGVGDTFMGVLISGLARGCELGDGLIDVAQKGA 619
Query: 308 V 308
V
Sbjct: 620 V 620
>gi|343085861|ref|YP_004775156.1| ribokinase [Cyclobacterium marinum DSM 745]
gi|342354395|gb|AEL26925.1| ribokinase [Cyclobacterium marinum DSM 745]
Length = 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 2 NYVL--GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
N++L GG N A ++LG K M++ LG D+ G +E++K GL+ EG+ +
Sbjct: 35 NFLLNAGGKGANQAVAAARLGGKVAMMARLGNDLFGKQTIENFKKEGLNVEGVVLDNKLP 94
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
+ V ++D +GE VA ++ L + ++ + A V+++ + +
Sbjct: 95 SGVAQIVVDKSGENTIVVAGGSNLA--LNTRQVNKYYSLVQEAEVILLQLEVPMETVLYV 152
Query: 120 CKIAAECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+ A V P K S ++ + + IT PNE E L+G N+ ++
Sbjct: 153 AQKATGLGKKVILNPAPANKLSDKLYASIYAIT---PNETE----TKFLTGINITG--EK 203
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ A F +KG+++V++TLG+ G L +
Sbjct: 204 SAQHAADFFH----------DKGVKVVIITLGAAGAFLST 233
>gi|417902684|ref|ZP_12546549.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21266]
gi|341842660|gb|EGS83895.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21266]
Length = 372
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|298368631|ref|ZP_06979949.1| ribokinase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282634|gb|EFI24121.1| ribokinase [Neisseria sp. oral taxon 014 str. F0314]
Length = 309
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KLGS+ M++ +G D+ +E+++ + T I + D + V
Sbjct: 37 GGKGANQAVAAAKLGSEVLMLTRVGNDIFAENTIENFRRHNIDTRYILKS-DASSGVAPI 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E ++ ++ K LT I I ++++ + + A+ K E
Sbjct: 96 FVD--PESRNSIIIIKGANKLLTSADIDAAAEDIKKCKLIVLQLEIPTETVYAAVKFGEE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV F P + + VK + PNE EL + L+G P+D
Sbjct: 154 HGIPVLFNPAP-AQPDLVLDQVKSCEFIVPNETEL----SLLTG----MPVDSE------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE----LLSSMRIGLRKTKPYG 236
++ A + L + G++ V++TLGS GVL ++ + S ++ R T G
Sbjct: 199 --DDIRKAAVALHQAGVKNVIVTLGSKGVLWLDQDGKERMFPSFKVKARDTTGAG 251
>gi|187933127|ref|YP_001887187.1| sugar kinase, ribokinase family [Clostridium botulinum B str.
Eklund 17B]
gi|187721280|gb|ACD22501.1| sugar kinase, ribokinase family [Clostridium botulinum B str.
Eklund 17B]
Length = 363
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
++LGG RN+A ++KL Y IS G D+ G L+ K L I+ + I
Sbjct: 90 HLLGGAGRNIALALTKLEIPNYFISVFGDDLNGEKFLDDAKENNLD---IQYCEKIKGEA 146
Query: 63 VSNILDVNGELAAAVASVESIEKF--LTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
S+ + +N + ++ ++ + +TP +I + + I+ + ++D NL +
Sbjct: 147 TSSFISINDSAGNRIVGIDDMDIYHNITPMFIEKNLDKINHSDYCIIDTNLPKDTIDY-- 204
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
I + P+ + VS+ KS R+ + ++ I ++ EL + + L+
Sbjct: 205 -IYEKVTAPLVVKTVSLNKSYRLINNIQKIEILIITPKELFQLISELN------------ 251
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVL 207
+ + AI +LL +G++ V++
Sbjct: 252 ----ETYTNISNAIDILLNRGVKNVLV 274
>gi|253730674|ref|ZP_04864839.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253725518|gb|EES94247.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 97 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 155
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 156 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 214
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 215 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 255
>gi|265993534|ref|ZP_06106091.1| ribokinase [Brucella melitensis bv. 3 str. Ether]
gi|262764404|gb|EEZ10436.1| ribokinase [Brucella melitensis bv. 3 str. Ether]
Length = 313
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
EP V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLEPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|308235872|ref|ZP_07666609.1| kinase, PfkB family protein [Gardnerella vaginalis ATCC 14018 = JCM
11026]
Length = 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V Y LGGV RN+A + ++ ++ ++S G D G + GL ++ D T
Sbjct: 88 VRYALGGVGRNIAVALERMNTRVSLVSVYGGDHNGELFKVDASVNGLEIGYSKQLPDAMT 147
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
A + D +G+ A+ + SI ++TPD++R+ I I +A ++ +D N+S + C
Sbjct: 148 ASYMYVGDASGQRLLALDDM-SIYDYMTPDFLRERISIIENADIVALDTNISQKSFEWVC 206
>gi|296224217|ref|XP_002757958.1| PREDICTED: ribokinase isoform 2 [Callithrix jacchus]
Length = 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGRDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANIISRAKVMVCQLEITPATSLEALTMAH 168
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P ++ R T V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYT----LSNVFCCNESE----AEILTGLTVGSAADAGE- 219
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G +L S+ I K K
Sbjct: 220 -----------AALVLLKRGCQVVIITLGAEGCVLLSQTEPEPKHIPTEKVK 260
>gi|298245530|ref|ZP_06969336.1| ribokinase [Ktedonobacter racemifer DSM 44963]
gi|297553011|gb|EFH86876.1| ribokinase [Ktedonobacter racemifer DSM 44963]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 59/299 (19%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ +V GG N A ++++G+ M +G+D G+ LL+ ++ G+ T+ I R K+ +T
Sbjct: 36 LKFVPGGKGANQAVAIARMGASVTMAGRVGIDSFGDRLLDAMRTEGIDTQLIVRDKEENT 95
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
L G+ A VA ++ ++Q ++SA L++ + + +
Sbjct: 96 GTAFIFLSHEGDNAIVVAGGTNMLVGEDEAHMQQIHAALASAQALVLQLEIPLATVTSLI 155
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ A +PV R +++ +TV+ NE E A LSG+ +
Sbjct: 156 EKADTLGVPVTLNLAPAQALSR--DLLRKVTVLVLNETE----ATQLSGQQV-------- 201
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240
HS E + +L GI+ VV+TLG+ G +L +++ G SR
Sbjct: 202 HSVEDA----RIVATILHGYGIQTVVITLGARGAMLVTRD-------------TTGQSRC 244
Query: 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
+Y+ S ++P V T AGDC VG ++S G
Sbjct: 245 IYQA----------SPKVQP------------------VDTTAAGDCFVGALTVALSEG 275
>gi|156375023|ref|XP_001629882.1| predicted protein [Nematostella vectensis]
gi|156216892|gb|EDO37819.1| predicted protein [Nematostella vectensis]
Length = 339
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG A N SKLG+K M++ +G D G+ ++++K G++T+ I + D T V S
Sbjct: 56 FGGKAANQCCMASKLGAKVAMVAMVGKDKFGDDTIQNFKDLGVNTDHILQTDDAATGVTS 115
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++V+ E S+ + LT D ++ ++ + VL+ D + A K
Sbjct: 116 --INVDSEGKPGFISMAGSNRLLTIDQVQPALNKLQGFHVLVCDKGIPLNTSAQVLKHGK 173
Query: 125 ECNIPVWFEPVSVTKSRRITS----VVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ F P S RI + + I+++ N DE L+G P++
Sbjct: 174 QLGAKTIFNP-----SPRIEQMEPEMYRSISLMVLNGDE----GEGLTG----IPVND-- 218
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
+ K I+ + ++G VVLTLG G +CS+E + R+ +
Sbjct: 219 ------ITSAKTVIMEIHKRGTAAVVLTLGKHGA-VCSQEGCPMFHVKTRQVQ 264
>gi|160902364|ref|YP_001567945.1| ribokinase-like domain-containing protein [Petrotoga mobilis SJ95]
gi|160360008|gb|ABX31622.1| PfkB domain protein [Petrotoga mobilis SJ95]
Length = 307
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 122/304 (40%), Gaps = 56/304 (18%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y GGVARNVA + KL + A+G D+ G I+L + ++T I+ + T V
Sbjct: 33 YSSGGVARNVAHNLCKLEVPVNLFGAVGNDVFGEIILAELDNLKINTNFIKICDNRRTGV 92
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
ILD ++ +++ ++ I + + ++I++ + + ++ ++ANL P + KI
Sbjct: 93 YLAILDEKKDMFVSISDMDIINE-ININYIKKHKDTLLQSKIVFLEANLEPQTIEYILKI 151
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
N+ F VS K +++ ++ I ++ N EL ++ N F + S
Sbjct: 152 LENTNVYTVFNAVSNLKVKKLKNITGKIDYLTLNFSELKSLREQ-ENLNFF-----DYKS 205
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
+ F P I L ++T G +GVLL + F R
Sbjct: 206 IQKTFPEKFPNIFNL--------IVTNGEEGVLLLNNR----------------FKR--- 238
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
+ FF+V + +V GAGD G + I D+
Sbjct: 239 ---------------------ADFFSVA-EVEDSEIVDANGAGDAFTAGFIYGIYKDADI 276
Query: 303 MQSV 306
+S+
Sbjct: 277 EKSI 280
>gi|417896220|ref|ZP_12540182.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21235]
gi|341840895|gb|EGS82372.1| kinase, PfkB family [Staphylococcus aureus subsp. aureus 21235]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCVIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|226292288|gb|EEH47708.1| IdgA domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 772
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 136/343 (39%), Gaps = 61/343 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKS--AGLSTEGIR---RQ 55
++ LGGV NVA S +GS + S + D++G L + A + ++GI+
Sbjct: 397 ISQSLGGVGHNVALAASYVGSPVLLCSIVADDLSGRAALAAIEKSRANIHSQGIQILSST 456
Query: 56 KDIDTAVVSNILDVNGELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ TA +I D +L A+A + E+ EK L + + ++VDAN S
Sbjct: 457 SGVRTAQYVSINDAKRDLMLAMADMSIMETPEKTLNFGSFWDPLVQRARPKWVVVDANWS 516
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRI----TSVVK------------YITVVSPN 156
P L+ +A FEPVS KS R+ S +K I + +PN
Sbjct: 517 PDVLSKWISLAKSHGAKTAFEPVSTAKSARLFTKSQSTLKPVIQPSSTIPNHTIDLATPN 576
Query: 157 EDELVAMANALSGENMFRPID---------------RNKHSA---ESLFQTLKPAILVLL 198
EL AM A +F + R++ A L P + L
Sbjct: 577 RYELAAMYTAARDTGLFESAEWWRVINALEMPSSGSRDRLIALTNSELVNEGIPQQSIQL 636
Query: 199 EKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAM 258
I ++ LG GVLL +LLS LR S D + + R Y+
Sbjct: 637 LPFIPCIISKLGPQGVLLT--QLLSRGDERLR-------SADFAQYILGRA----YADDT 683
Query: 259 EPAGGSQFFAVHFPALP----ASVVRLTGAGDCLVGGTLASIS 297
P GG + FPA VV + GAGD L+G +A ++
Sbjct: 684 NPVGG--VYMRLFPAAEVLRDTDVVSVNGAGDTLLGVIVAGLA 724
>gi|320589104|gb|EFX01566.1| indigoidine synthase a-like protein [Grosmannia clavigera kw1407]
Length = 773
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 138/334 (41%), Gaps = 46/334 (13%)
Query: 1 VNYVLGGVARNVAECMSKLG--SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKD 57
+ +GGV NVA ++ ++ + + +G D+AG +L ++AGL T G+++ +
Sbjct: 410 IRQTVGGVGHNVALAAHRVSPSTRVKLCTLVGDDIAGATILSAMQTAGLDTTGVQQLGHE 469
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASV--LMVDANLSPPA 115
A + + +NG + V ++ ++ F D +++A+ ++VD N P
Sbjct: 470 HSGARTAQYVAINGADKSLVVAMADMDIFARDDATNGCSSAVTAAAPRWVVVDGNWRPAG 529
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRR-------ITSVVKYITVVSPNEDELVAMANALS 168
L A E V FEPVS KS R + + + + +PNE EL AM A S
Sbjct: 530 LHGWIAAAREAGAHVAFEPVSAAKSSRLFRGDSHLDGRLPLVDLATPNEHELAAMHAAAS 589
Query: 169 GENM-------FRPIDRNK--HSAESLFQTLKPAILV---LLEKGIRL------VVLTLG 210
+ F I R A F L A LV + ++ ++L VV LG
Sbjct: 590 ARGLLTADPRWFAVIGRLGLMAGARDRFVRLTSAALVDAGVPQQAVQLLPYIPTVVTKLG 649
Query: 211 SDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAM--EPAGGSQFFA 268
S G LL R+ L P R + R G + +P GG +
Sbjct: 650 SRGALLT--------RL-LAPDDPLLHDRSAEAHILVRAPLDDGDGDLNYQPVGG--VYM 698
Query: 269 VHFPALP---ASVVRLTGAGDCLVGGTLASISSG 299
FPA A +V + G GD +G + ++ G
Sbjct: 699 RLFPAAAVDDAHIVSVNGVGDTFLGALVGGLAQG 732
>gi|313678158|ref|YP_004055898.1| PfkB family carbohydrate kinase [Mycoplasma bovis PG45]
gi|339320553|ref|YP_004683075.1| hypothetical protein MMB_0026 [Mycoplasma bovis Hubei-1]
gi|392429620|ref|YP_006470665.1| Sugar kinase,ribokinase family [Mycoplasma bovis HB0801]
gi|312950808|gb|ADR25403.1| carbohydrate kinase, pfkB family [Mycoplasma bovis PG45]
gi|338226678|gb|AEI89740.1| conserved hypothetical protein [Mycoplasma bovis Hubei-1]
gi|392051029|gb|AFM51404.1| ribokinase family sugar kinase [Mycoplasma bovis HB0801]
Length = 299
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVA N+A+ ++ G +ISA+G D+ N + + ++ L++ I + D TA
Sbjct: 35 LGGVAYNIAKNLALSGIDTTLISAVGNDLEANWIKKQLENDSLNSILIAKN-DYKTAKYV 93
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHH--ISSASVLMVDANLSPPALAASCKI 122
++D N ++ A + + E + D+ F + + ++ L +DANLS + CK
Sbjct: 94 ALIDNNSDMNVAASDTKITE---SIDYNDLFAYKKLLDKSTYLCLDANLSSYLIVKLCKN 150
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
++ I E VS K + V+K+I+++ N+ E A+ N S ++F +
Sbjct: 151 FSDKFIVA--EAVSSQKILKFKPVLKHISLLKGNKLEFQALLNT-SETDLFILASK---- 203
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+LE GI+ VV+T G +G + + E
Sbjct: 204 --------------VLELGIKSVVITDGENGCIYANNE 227
>gi|257795064|ref|ZP_05644043.1| PfkB domain-containing protein [Staphylococcus aureus A9781]
gi|257789036|gb|EEV27376.1| PfkB domain-containing protein [Staphylococcus aureus A9781]
Length = 372
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYIT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|164687111|ref|ZP_02211139.1| hypothetical protein CLOBAR_00737 [Clostridium bartlettii DSM
16795]
gi|164603996|gb|EDQ97461.1| ribokinase [Clostridium bartlettii DSM 16795]
Length = 297
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++Y+ GG N A M+KLG++ M +G D G ++++ K+ G+ T+ I+ + + T
Sbjct: 35 ISYIPGGKGANQAVAMAKLGAEVEMFGCVGDDENGKKMIDNMKNHGIKTDNIKVLEGVPT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + GE + V + ++I + + ++++ + + +
Sbjct: 95 GIAMITI---GENDNTIIVVPGANGKVDKEYIDGIKEELKNYDMVVLQHEIPLETVHYTV 151
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM-ANALSGENMFRPIDRN 179
+ +E NIPV P + VV+ +T ++PNE E V + N LS E + +
Sbjct: 152 EFCSENNIPVILNPAPAAEVPM--EVVEKVTYLTPNEHEAVLIFGNELSSEELLK----- 204
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVV 206
K++ + L + LE G L V
Sbjct: 205 KYAGKLLITQGSKGVSTCLETGEILTV 231
>gi|373857709|ref|ZP_09600449.1| ribokinase [Bacillus sp. 1NLA3E]
gi|372452380|gb|EHP25851.1| ribokinase [Bacillus sp. 1NLA3E]
Length = 306
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +K+GSK M++ +G D+ + +++ +S G+ TE + + V
Sbjct: 37 GGKGANQAVAAAKMGSKVMMVTKVGDDLFADNTIQNLESYGIDTEFTNKVLGTSSGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D E + ++ + L P + + + S++++ + + + + E
Sbjct: 97 FVD--PESKNRILIIKGANQQLLPVDVDRAADKLKQCSLIVLQLEIPLETIYRAIEFGNE 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P +K+ + V K + PNE EL L+G P++ ++
Sbjct: 155 HGIPVILNPAPASKNLDFSYVCKCDFFI-PNESEL----EILTG----MPVETDEQ---- 201
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+K A L+EKG++ V++T+GS GV+ +K
Sbjct: 202 ----IKAAASTLIEKGVKDVIVTMGSRGVMWVTK 231
>gi|441503267|ref|ZP_20985274.1| Ribokinase [Photobacterium sp. AK15]
gi|441429483|gb|ELR66938.1| Ribokinase [Photobacterium sp. AK15]
Length = 306
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ I+ +G D G + E + G++TE + ++++ T +
Sbjct: 38 GGKGANQAVAAARLGADVAFIACVGDDSFGYQMREEFAKEGMNTEAVLVEENVPTGIAMI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ GE + +++ LTP + H +++A L++ + A+ K+A E
Sbjct: 98 QVAATGENSICISA--EANACLTPKRLEPHHHLLANADTLLMQLETPIETIEAAAKVAQE 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V P +++ I +++PNE E A L+G + + SA+
Sbjct: 156 AGTRVVLNPAPAQPLS--DDLLQLIDMITPNETE----AELLTGVKV-----EDTASAQK 204
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRIGLRKTKPYG 236
A VL KGI+ V++TLGS GV + ++ + + R+ + T G
Sbjct: 205 -------AADVLHAKGIKQVMITLGSQGVWISNEGKGQQVPGFRVDAKDTTAAG 251
>gi|429125272|ref|ZP_19185804.1| carbohydrate kinase, pfkB family protein [Brachyspira hampsonii
30446]
gi|426278826|gb|EKV55856.1| carbohydrate kinase, pfkB family protein [Brachyspira hampsonii
30446]
Length = 313
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 64/298 (21%)
Query: 6 GGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+ +S +G K I+++G D+ G+ILL + KS G+ I R T+ ++
Sbjct: 38 GGVERNIINNLSNIGLKNIKFITSIGDDIFGDILLNNIKSLGVDVSYIVRNGS-STSYIA 96
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ + ++ A++ +++++K + +++ + +A + +DA ++ I
Sbjct: 97 -IMNNDRDMEIAMSDMDTLDKNINIEYLDTIKDIVENAEFITIDAVMNREIF--EYLIDN 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N + + VS+ KS I + +I + N +E + +D + ++ E
Sbjct: 154 FPNKKLLTDAVSIKKSEHIKGLENHIYALKLNSNEASFL------------LDMDINTIE 201
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
K A+ + L+KG++ + +T G+ G+ C YG D+ K
Sbjct: 202 EG----KKAVRIFLKKGVKEIYITFGALGI--C-----------------YGTYNDISK- 237
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
+ + A ++V TGAGD + G + SI D+
Sbjct: 238 -----------------------SYYLKAPKINIVNATGAGDAFMAGIVYSIFHDYDL 272
>gi|344228500|gb|EGV60386.1| hypothetical protein CANTEDRAFT_136869 [Candida tenuis ATCC 10573]
Length = 275
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 31/254 (12%)
Query: 47 LSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISS--ASV 104
+ T G+R + D TA +++ +GEL A + + +E+ LT ++ HI + S
Sbjct: 3 IDTSGLRVEVDNRTASYTSVHSSDGELIIACSDMTIVEEDLTDHALK----HIEAFKPST 58
Query: 105 LMVDANLSPPALAASCKIAAECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161
+++D NLS L + A I + EP S+ KSR+I S+ + +++P +E+
Sbjct: 59 VVLDCNLS---LKTINNVLAHVQISSGRIIIEPTSLVKSRKIGSLNHPVDLITPTVNEMN 115
Query: 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGI-RLVVLTLGSDGVLLCSKE 220
A ++ ID+N + F+ + L +++ I + +L L ++G++
Sbjct: 116 A---------IYESIDQNGRFNDDWFEVIDTLKLDDIQRFILKGKLLELYNEGIIQKCFR 166
Query: 221 LLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS--- 277
+L R L K +G L +T S ++R S + F+ ++P P +
Sbjct: 167 ILPFARNILLKLGKHGVLT-LGQTKESIFMAARKSQIQ----TANFYIDYYPVPPENENL 221
Query: 278 -VVRLTGAGDCLVG 290
+V +TGAGD ++G
Sbjct: 222 EIVNMTGAGDSMLG 235
>gi|116181698|ref|XP_001220698.1| hypothetical protein CHGG_01477 [Chaetomium globosum CBS 148.51]
gi|88185774|gb|EAQ93242.1| hypothetical protein CHGG_01477 [Chaetomium globosum CBS 148.51]
Length = 641
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGS--KPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKD 57
++ +GGV N+A ++ K + S +G D+AG+ +L ++ GL T IR+ +
Sbjct: 278 ISQSVGGVGHNIALAAHRISGDGKVRLCSMVGDDIAGSTILSTLRATGLDTSSIRQLGTE 337
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASV--LMVDANLSPPA 115
+A + + VN V ++ ++ F T + + +++A L+VDAN S
Sbjct: 338 FPSARTAQYVAVNDADKNLVMAMADMDIFSTHSFPSDWTSTVATAQPKWLVVDANWSETD 397
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRITSVV-------------KYITVVSPNEDELVA 162
+ + A N FEPVS KS+R+ ++ + + +PN+ EL+A
Sbjct: 398 IQTWLRAGAHHNARTAFEPVSAAKSQRLFPIIPKNNKPTLGVYPRPTVDLCTPNQHELLA 457
Query: 163 MANA 166
M A
Sbjct: 458 MYEA 461
>gi|319784092|ref|YP_004143568.1| ribokinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169980|gb|ADV13518.1| ribokinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 309
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 119/305 (39%), Gaps = 73/305 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A KLG+ ++ LG+D ++ + W AG+ I + A
Sbjct: 41 GGKGSNQAVAAGKLGADVTFLTRLGVDPFADMARQTWAQAGVKNAVIDTPESYTGAAYIF 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA--SCKIA 123
+ + G A V+ ++ ++P I IS+A V + L P AA + +IA
Sbjct: 101 VEETTGNNAIIVSPGAAM--LISPADIEANAALISNAGVFVT--QLEQPIEAAMRALEIA 156
Query: 124 AECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ P K RI ++ Y+T PNE E L+G + +D + +
Sbjct: 157 RGAGVTTILNPAPAAKLPDRIYTLCDYLT---PNETE----TEELTGMKVSS-VDEARAA 208
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242
A+SL L+KG+ V++TLG G LL SK+
Sbjct: 209 ADSL-----------LKKGVGTVIVTLGDKGALLHSKD---------------------- 235
Query: 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLD 301
R H PA+ A VV TGAGD GG A++S G++
Sbjct: 236 -----RSD-------------------HVPAVSAGPVVETTGAGDAFNGGLAAALSRGVE 271
Query: 302 VMQSV 306
+Q+V
Sbjct: 272 PLQAV 276
>gi|212640490|ref|YP_002317010.1| ribokinase [Anoxybacillus flavithermus WK1]
gi|212561970|gb|ACJ35025.1| Ribokinase [Anoxybacillus flavithermus WK1]
Length = 294
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ +MI A+G DM G LL+H + G+ +G++ D++T + +
Sbjct: 40 GGKGANQAVAAARLGADVHMIGAVGADMFGTELLQHLQKEGIIVDGVKPVTDVETGIATI 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ E + V L PD + ++ I+++ V ++ + P + + IA
Sbjct: 100 VIS---EGDNRIIVVPGANHALCPDDLERWEEKIATSDVCLLPLEIPLPVVEQAVAIAKR 156
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+ V P ++ + +++PNE E
Sbjct: 157 HGVRVILNPAPAQPLP--DQLLDQVDILTPNEHE 188
>gi|167827710|ref|ZP_02459181.1| ribokinase [Burkholderia pseudomallei 9]
gi|226197704|ref|ZP_03793279.1| ribokinase [Burkholderia pseudomallei Pakistan 9]
gi|225930313|gb|EEH26325.1| ribokinase [Burkholderia pseudomallei Pakistan 9]
Length = 310
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ ++ + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPTDIDAAAAKIEASRLVVLQLEIAIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|340923910|gb|EGS18813.1| hypothetical protein CTHT_0054230 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 818
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 144/372 (38%), Gaps = 80/372 (21%)
Query: 1 VNYVLGGVARNVAECMSKLGS--KPYMISALGLDMAGNILLEHWKSAGLSTEGIRR---- 54
++ +GGV N+A + K + S +G D+AG+ +L +S+GL T IR+
Sbjct: 437 IHQSIGGVGHNIARAAHLVSDEGKVRLCSMVGDDIAGHTILSTLQSSGLDTSCIRQLGHE 496
Query: 55 QKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP 114
TA + D N L A+A + P + + + L+VDAN S
Sbjct: 497 YPSARTAQYVAVNDANKNLVMAMADMAIFSSHSFPAYWNSAVA-AARPKWLVVDANWSEH 555
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITS----------------VVKY--------- 149
+ + + + FEPVSV KS+R+ V+ +
Sbjct: 556 DIQSWIQAGRRHGAKIIFEPVSVAKSQRLFPNLDAWRRHHHHHKHDFVIPHELPVHPRPL 615
Query: 150 ITVVSPNEDELVAMANAL------------------------SGENMFRPIDRNKHSAES 185
+ + +PN EL+AM A SG + F I ++H+A
Sbjct: 616 VDLATPNHHELLAMYQAAKAHGHLDTSAWFDVIDAFGITGRSSGRDRFDAI-FSQHNARD 674
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L P + L I ++ LG G LL + LL LR G SR V
Sbjct: 675 LVDAGLPVQSISLLPYIPTLITKLGPRGALLTA--LLPPDDPRLRDP---GHSR----WV 725
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPA--LP-ASVVRLTGAGDCLVGGTLASISSG--- 299
SRC + P G + ++ PA +P VV + G GD VG +A ++ G
Sbjct: 726 ISRCAVPDH-----PHIGGVYMRLYPPAEKVPDQEVVSVNGIGDTFVGVLVAGLAMGGRV 780
Query: 300 ---LDVMQSVAV 308
+DV Q AV
Sbjct: 781 ERLIDVAQRAAV 792
>gi|385801122|ref|YP_005837525.1| ribokinase [Gardnerella vaginalis HMP9231]
gi|415703799|ref|ZP_11459550.1| ribokinase family sugar kinase [Gardnerella vaginalis 284V]
gi|333394055|gb|AEF31973.1| ribokinase [Gardnerella vaginalis HMP9231]
gi|388051105|gb|EIK74130.1| ribokinase family sugar kinase [Gardnerella vaginalis 284V]
Length = 303
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++GSK M++ +G D+ + +++ G+ ++ + R T+ V+
Sbjct: 37 GGKGANQAVAASRMGSKVLMVTRVGNDVFAENTINNFEKNGIDSKFVMRTD--ATSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ + ++ V+ L P+ + + IS ++++ + + A+ K+ AE
Sbjct: 95 IF-VDPQSRNSIIIVKGANAKLKPNDVEKARSEISKCKLIVLQLEIPLETVYATIKMGAE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV P + + + ++ + PNE EL + L+G P+D +
Sbjct: 154 LGVPVLLNPAPADPALSLEN-IRNCEFIVPNESEL----SLLTG----MPVDTS------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + A +LL+ GI V++TLGS G LL + E
Sbjct: 199 --EDITNAARMLLQSGIPNVIVTLGSKGALLVNSE 231
>gi|261219877|ref|ZP_05934158.1| ribokinase [Brucella ceti B1/94]
gi|265996781|ref|ZP_06109338.1| ribokinase [Brucella ceti M490/95/1]
gi|260918461|gb|EEX85114.1| ribokinase [Brucella ceti B1/94]
gi|262551078|gb|EEZ07239.1| ribokinase [Brucella ceti M490/95/1]
Length = 313
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ V+SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDVISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|336399696|ref|ZP_08580496.1| ribokinase [Prevotella multisaccharivorax DSM 17128]
gi|336069432|gb|EGN58066.1| ribokinase [Prevotella multisaccharivorax DSM 17128]
Length = 314
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++LG+K I +G D GN L H K G+ T I R + V
Sbjct: 44 FGGKGANQAVAAARLGAKTIFIGKVGDDDFGNSTLSHLKEEGIDTSFIYRSTKASSGVAL 103
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
V GE V + E L+P I +A+++++ + + KIA
Sbjct: 104 ITTVVGGENTIIVNPGANFE--LSPTEIELSHKAFEAAAIVLMQLETPIDTILTASKIAK 161
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E V P T +++ + ++ PN+ E A+ +SG ++ +
Sbjct: 162 EYGCYVILNPAPAPTKPLPTELLENVDMLIPNKTE----ASTISGVDITDDV-------- 209
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
T + AI + E GI+ VV+T+GS GVL
Sbjct: 210 ----TTRQAIDKIKELGIKDVVITIGSHGVL 236
>gi|434382677|ref|YP_006704460.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli WesB]
gi|404431326|emb|CCG57372.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli WesB]
Length = 309
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 128/321 (39%), Gaps = 79/321 (24%)
Query: 1 VNYVLGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
+N GGV RN+ +S LG I+++G D+ G+ILL + KS + T I ++
Sbjct: 33 INICAGGVERNIVHNLSNLGLYNIKFITSIGNDIFGDILLNNIKSLNIDTSYIIKKGSST 92
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + I++ + ++ AV+ ++ ++K +T +++ I +A ++ +DA +
Sbjct: 93 TYMA--IMNSDKDMYLAVSDMDDLDKNITIEYLDSIKDIIKNAKLITIDAVIKREIFEYL 150
Query: 120 CKIAAECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
K N P + + VSV K+ I + K+I + N +E + +
Sbjct: 151 IK-----NFPDKKLLCDAVSVKKAENIKGLEKHIYALKLNSNEASFL------------L 193
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
D++ + E + A+ ++ G+ + +T G+ S KTKP
Sbjct: 194 DKDISTIEEGLE----AVERFIDIGVSEIYITFAEKGICYAS-----------TKTKP-- 236
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
H A +++ +GAGD + G + SI
Sbjct: 237 --------------------------------AHLKAPKVNILNASGAGDAFMAGIIYSI 264
Query: 297 SSGLDVMQSVAVDDAKTVYAA 317
+ D+ D K +AA
Sbjct: 265 YNNFDL-------DYKVKFAA 278
>gi|373463939|ref|ZP_09555517.1| HTH domain protein [Lactobacillus kisonensis F0435]
gi|371763646|gb|EHO52107.1| HTH domain protein [Lactobacillus kisonensis F0435]
Length = 369
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWK-SAGLSTEGIRRQKDID 59
V + +GG+ RN++ + KLG Y IS G D+ G E +K A + I K +
Sbjct: 95 VYHAIGGLGRNISLNLRKLGVFNYFISVYGDDLGG----EQFKVDANNNDMDITYSKQLI 150
Query: 60 TAVVSNILDVNGELAAAVASVES--IEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
S+ + +N ++ I +LTP++++ + I +++ +++D+NL +
Sbjct: 151 NQKTSSYIYLNQATGERFVGLDDMGINDYLTPEFLQPRLDVIHNSTCVVIDSNLPEETIQ 210
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRR-ITSVVKYITVV------------SPNEDEL---V 161
C N P++ + VS+ K++R I+S+ K T+V +PN+ E
Sbjct: 211 WICN---NFNGPIFAKAVSLVKTKRLISSLSKLNTLVINGVEAPVLTGITPNDKETSISC 267
Query: 162 AMA-NALSGENMFRPIDR 178
AM N L EN+F +D
Sbjct: 268 AMTLNNLGVENVFLYVDE 285
>gi|311070100|ref|YP_003975023.1| ribokinase [Bacillus atrophaeus 1942]
gi|419821524|ref|ZP_14345118.1| ribokinase [Bacillus atrophaeus C89]
gi|310870617|gb|ADP34092.1| ribokinase [Bacillus atrophaeus 1942]
gi|388474497|gb|EIM11226.1| ribokinase [Bacillus atrophaeus C89]
Length = 293
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR--QKDIDTA 61
V GG N A S+LG++ M+ +G D G ++++ K+ G+STE + KD TA
Sbjct: 36 VPGGKGANQAVAASRLGARVTMVGKVGDDHYGKAIIDNLKANGVSTEYMEPVIHKDSGTA 95
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ V E ++ V+ +TP++ +Q + I ++++ + + C
Sbjct: 96 HI-----VLAEGDNSIVVVKGANDEITPEYAKQALEQIEKIDIVLIQQEIPELTVDEVCS 150
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ P ++ T + Y + ++PNE E
Sbjct: 151 YCRSHDIPIMLNPAPARPLKQET--IDYASFLTPNEHE 186
>gi|384549201|ref|YP_005738453.1| sugar kinase [Staphylococcus aureus subsp. aureus JKD6159]
gi|302332050|gb|ADL22243.1| sugar kinase [Staphylococcus aureus subsp. aureus JKD6159]
Length = 372
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAENIGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + + + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAVDWIITNKDETETYLN 250
>gi|448521033|ref|XP_003868408.1| hypothetical protein CORT_0C01270 [Candida orthopsilosis Co 90-125]
gi|380352748|emb|CCG25504.1| hypothetical protein CORT_0C01270 [Candida orthopsilosis]
Length = 741
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 139/321 (43%), Gaps = 59/321 (18%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI----DT 60
+GGV N+A S + + + S +G D AG +L ++ EGI K ++
Sbjct: 386 IGGVGYNLALASSYISNNTKLFSRVGNDFAGETILHR-----IAKEGIVNSKFTKGLSNS 440
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHI--SSASVLMVDANLSPPALAA 118
A S + D G+L A A + IE+ P++ +Q I I + ++++D NLS ++++
Sbjct: 441 AQYSCVHDSQGDLIVACADMSIIEE---PEFSKQVIEEIEQTQPKIVLMDCNLSMDSMSS 497
Query: 119 SCK-IAAECNIPVW-FEPVSVTKSRRITSVV------KYITVVSPNEDELVAMANALSGE 170
+ + + P + EP S K++RI+ V I +V+P +EL M ++
Sbjct: 498 IIEHFQGKSSAPDFIIEPTSYIKAKRISGVEFATFPNNKIQLVTPTIEELNTMYESMEKS 557
Query: 171 NMFR-----PIDRNKHSAESLFQTLKPAILVLLEKGI-----------RLVVLTLGSDGV 214
F PI + S+ L L +G+ + +++ LG GV
Sbjct: 558 GQFDLDHWFPILDAMNINASMRDKLVKLDPKLYARGVFQQCFHLLPFFQNILVKLGDRGV 617
Query: 215 LLCS-----KELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV 269
+L S K+L S + KP G TV + SR +E +F +
Sbjct: 618 MLFSLVTNHKDLKSIPTTS--QYKPTG-------TVVND-FDSRLGVVVE------YFDI 661
Query: 270 HFPALPASVVRLTGAGDCLVG 290
L SVV +TGAGD +VG
Sbjct: 662 PKQNLNLSVVNVTGAGDTMVG 682
>gi|448411810|ref|ZP_21576166.1| ribokinase [Halosimplex carlsbadense 2-9-1]
gi|445669744|gb|ELZ22352.1| ribokinase [Halosimplex carlsbadense 2-9-1]
Length = 317
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ +G D G+ + W++ G+ E + R T V
Sbjct: 42 GGKGSNQAIAAARLGAESRFAGRVGADRYGDDAVALWEAEGVDAEAVGRDDAAHTGVGFV 101
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D +GE VA L+ +R+ I +A L+V + + A+ + AAE
Sbjct: 102 VVDEDGENEITVAP--GANDRLSAADVRERAAAIETADCLLVQLEIGDEPVRAAVETAAE 159
Query: 126 CNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
V P +R + +V++ + ++PNE E A L+G + R D ++
Sbjct: 160 AGTTVVCNP---APARELPPAVLEQVDYLTPNEHE----ARTLAG--VARDDDETGSDSD 210
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + +L L G+ VVLT GS G LL S +
Sbjct: 211 ITDEAVARELLGL---GVGAVVLTRGSAGALLVSDD 243
>gi|196012054|ref|XP_002115890.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581666|gb|EDV21742.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 297
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N +KLG+ MI+ +G D G+ +E++K G+ + +I T V
Sbjct: 25 FGGKGANQCIMAAKLGATTAMIARVGDDTFGSSTIENFKENGVDISKVMVTSNISTGVAP 84
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ GE ++ V K L+ D ++ + +S+A V+ + ++ A+ K A
Sbjct: 85 IIVNDEGE--NSIVIVSGANKLLSIDDVKAAGNMMSNAKVVACQLEIPLESVYAALKTAK 142
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E K + S+ K++ ++ NE E M L+ N +D K SA
Sbjct: 143 EFGAKTILNTAPANKDLDV-SIFKFVDILCLNETETEIM-TGLAVSN----VDEAKKSA- 195
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+L EKG V++TLG G ++ K+
Sbjct: 196 ----------CILAEKGPEYVLITLGKQGAVIAGKD 221
>gi|225681017|gb|EEH19301.1| indigoidine synthase family protein [Paracoccidioides brasiliensis
Pb03]
Length = 745
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 135/343 (39%), Gaps = 61/343 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKS--AGLSTEGIR---RQ 55
++ LGGV NVA S +GS + S + D++G L + A + ++GI+
Sbjct: 370 ISQSLGGVGHNVALAASYVGSPVLLCSIVADDLSGRAALAAIEKSRANIHSQGIQILSST 429
Query: 56 KDIDTAVVSNILDVNGELAAAVASV---ESIEKFLTPDWIRQFIHHISSASVLMVDANLS 112
+ TA +I D +L A+A + E+ EK L + + ++VDAN S
Sbjct: 430 SGVRTAQYVSINDAKRDLMLAMADMSIMETPEKSLDFGSFWDPLVQRARPKWVVVDANWS 489
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK----------------YITVVSPN 156
P L+ +A FEPVS TKS R+ + + I + +PN
Sbjct: 490 PDVLSKWISLAKSHGAKTAFEPVSTTKSARLFTKSQSTSKPVIQPSSTIPNHTIDLATPN 549
Query: 157 EDELVAMANALSGENMFRPID---------------RNKHSA---ESLFQTLKPAILVLL 198
EL AM A +F + R++ A L P + L
Sbjct: 550 RYELAAMYTAARDTGLFESAEWWRVINALEMPSSGSRDRLIALTNSELVNEGIPQQSIQL 609
Query: 199 EKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAM 258
I ++ LG GVLL +LLS LR S D + + R Y+
Sbjct: 610 LPFIPCIISKLGPQGVLLT--QLLSRGDERLR-------SADFAQYILGRA----YADDT 656
Query: 259 EPAGGSQFFAVHFPALP----ASVVRLTGAGDCLVGGTLASIS 297
P GG + FP VV + GAGD L+G +A ++
Sbjct: 657 NPVGG--VYMRLFPQAEVLRDTDVVSVNGAGDTLLGVIVAGLA 697
>gi|358387159|gb|EHK24754.1| hypothetical protein TRIVIDRAFT_122474, partial [Trichoderma virens
Gv29-8]
Length = 1337
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 138/352 (39%), Gaps = 55/352 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMI--SALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
+ +GGV NVA + + + S +G D+AG +L +++GL + +++
Sbjct: 389 ITQSIGGVGHNVALAAHRASRQAQVKFSSMVGDDIAGATVLSALEASGLDSTYVKKLDRT 448
Query: 59 D-----TAVVSNILDVNGELAAAVASVESIEKFLTP-DWIRQFIHHISSASVLMVDANLS 112
+ TA I D + L A+A + + L P DW + L+VD N S
Sbjct: 449 EHPGSRTAQYVAINDRSKNLVMAMADMGIFTQHLFPEDWKSTI--KATDPKWLVVDGNWS 506
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVV-----------SPNEDELV 161
P + A E V FEPVSV KS+ + + + + SPN EL
Sbjct: 507 PKGIRTWIHSANEHGSKVAFEPVSVEKSKSLFGPQRGVPTLGVFPHQSVDLSSPNIYELS 566
Query: 162 AMANA------LSGENMFRPIDR-NKHSAESLFQTLK---------PAILVLLEKGIRLV 205
AM +A L F ID A F L P + L I +
Sbjct: 567 AMYSAAKDNGYLDSPEWFEIIDSFGMRGARDQFVRLTSVELTDAGVPVQSIQLLPYIPTL 626
Query: 206 VLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQ 265
+ LGS GVLL + R+ R++ Y +R Y G PA G
Sbjct: 627 ITKLGSKGVLLTTILGKDDPRLRDRESDEYILTRS-------------YDG--NPAVGGI 671
Query: 266 FFAVHFPALP--ASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVY 315
+ + FP + +VV + G GD +G ++ ++ G V + V V VY
Sbjct: 672 YMRL-FPPVEHVENVVSVNGVGDTFLGVMVSGLAQGGRVDKLVDVAQRGAVY 722
>gi|261753013|ref|ZP_05996722.1| ribokinase [Brucella suis bv. 3 str. 686]
gi|261742766|gb|EEY30692.1| ribokinase [Brucella suis bv. 3 str. 686]
Length = 313
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAIGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|373454806|ref|ZP_09546669.1| ribokinase [Dialister succinatiphilus YIT 11850]
gi|371935502|gb|EHO63248.1| ribokinase [Dialister succinatiphilus YIT 11850]
Length = 296
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 112/301 (37%), Gaps = 76/301 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG + YM+ +G D G+++L+ K +G+ T+ + +DT
Sbjct: 38 GGKGANQAVAAARLGEEVYMVGCVGRDAYGSLMLDALKKSGVKTDYVSVLDGVDTGTAHI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
IL E ++ ++ ++P + + I ++ ++M+ + + E
Sbjct: 98 IL---AEGDNSIIVLKGANDRVSPQVVDEAFDIIRTSDLVMLQHEIPMDTIGYIIDRCYE 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV P + + +T ++PNE E MF+ +DR++
Sbjct: 155 EKVPVMLNPAPYMDIPK--EWIDKVTYITPNEHEAAL---------MFQGMDRDE----- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+L+ V++T+GS+GVL YG ++
Sbjct: 199 -----------ILKSHAGKVIMTVGSEGVL-------------------YGEGNEV---- 224
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
VH P VV TGAGD G A + GL + +S
Sbjct: 225 -----------------------VHVPGFHVPVVDTTGAGDTFNGAFAAGRAEGLSIRES 261
Query: 306 V 306
+
Sbjct: 262 I 262
>gi|418299452|ref|ZP_12911285.1| carbohydrate kinase [Agrobacterium tumefaciens CCNWGS0286]
gi|355534917|gb|EHH04213.1| carbohydrate kinase [Agrobacterium tumefaciens CCNWGS0286]
Length = 313
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G + E K AG+ D T +
Sbjct: 37 GGGGFNAARNLSRLGFQVRIIAPRGGDVTGEAVAEAAKQAGVEDTPFTFL-DRRTPSYTA 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ +G L A+A ++ + K TP IR I+++ +L+ DANL L A +A
Sbjct: 96 ILERDGNLVIALADMD-LYKLFTPRRLKIRAVREAITASDILLCDANLPDDTLTALGLVA 154
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 155 RACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAE----ARALTGET 198
>gi|380795683|gb|AFE69717.1| ribokinase, partial [Macaca mulatta]
Length = 297
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 26 FGGKGANQCVQAARLGATTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGTAS 85
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ G+ + V L + +R + IS A V++ ++P + +A
Sbjct: 86 IIVNNGGQ--NIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 143
Query: 125 ECNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 144 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVNSAADAGE-- 194
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL +G ++V++TLG++G ++ S+ I K K
Sbjct: 195 ----------AALVLLRRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 235
>gi|404475424|ref|YP_006706855.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli B2904]
gi|404436913|gb|AFR70107.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli B2904]
Length = 309
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 128/321 (39%), Gaps = 79/321 (24%)
Query: 1 VNYVLGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
+N GGV RN+ +S LG I+++G D+ G+ILL + KS + T I ++
Sbjct: 33 INICAGGVERNIVHNLSNLGLYNIKFITSIGNDIFGDILLNNIKSLNIDTSYIIKKGSST 92
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + I++ + ++ AV+ ++ ++K +T +++ I +A ++ +DA +
Sbjct: 93 TYMA--IMNSDKDMYLAVSDMDDLDKNITIEYLDSIKDIIKNAKLITIDAVIKREIFEYL 150
Query: 120 CKIAAECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
K N P + + VSV K+ I + K+I + N +E + +
Sbjct: 151 IK-----NFPDKKLLCDAVSVKKAENIKGLEKHIYALKLNSNEASFL------------L 193
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
D++ + E + A+ ++ G+ + +T G+ S KTKP
Sbjct: 194 DKDISTIEEGLE----AVSRFIDIGVSEIYITFAEKGICYAS-----------TKTKP-- 236
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
H A +++ +GAGD + G + SI
Sbjct: 237 --------------------------------AHLNAPKVNILNASGAGDAFMAGIIYSI 264
Query: 297 SSGLDVMQSVAVDDAKTVYAA 317
+ D+ D K +AA
Sbjct: 265 YNNFDL-------DYKVKFAA 278
>gi|376277282|ref|YP_005153343.1| ribokinase [Brucella canis HSK A52141]
gi|363405656|gb|AEW15950.1| ribokinase [Brucella canis HSK A52141]
Length = 306
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 42 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 101
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 102 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 159
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 160 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 209
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 210 ------LLERGPKIVILKLGSRGALLVTAD 233
>gi|424910655|ref|ZP_18334032.1| sugar kinase, ribokinase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392846686|gb|EJA99208.1| sugar kinase, ribokinase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 313
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G + E + AG+ D T +
Sbjct: 37 GGGGFNAARNLSRLGFQVRIIAPRGGDVTGEAVAEAARQAGVEDTPFTFL-DRRTPSYTA 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ +G L A+A ++ + K TP +R I+++ +L+ DANL LAA +A
Sbjct: 96 ILERDGNLVIALADMD-LYKLFTPRRLKVRAVREAITASDILLCDANLPEDTLAALGLVA 154
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 155 RACEKPLAAIAISPAKAVKLKAALADIDILFMNEAE----ARALTGET 198
>gi|281501016|pdb|3KZH|A Chain A, Crystal Structure Of A Putative Sugar Kinase From
Clostridium Perfringens
gi|281501017|pdb|3KZH|B Chain B, Crystal Structure Of A Putative Sugar Kinase From
Clostridium Perfringens
Length = 328
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGV RN+AE +++G S LG D G ++EH K G + + T
Sbjct: 41 FGGVCRNIAENXARVGVNTNFXSILGNDEHGKSIVEHSKKIGYHXDDSXVIEGGSTPTYL 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
ILD NGE +A+A +SI T D+I +A ++D++ P +
Sbjct: 101 AILDENGEXVSAIADXKSIGAXNT-DFIDSKREIFENAEYTVLDSD--NPEIXEYLLKNF 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ +PVS K+ + ++K + PN E A L+G F D +
Sbjct: 158 KDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHE----AEILAG---FPITDTDD---- 206
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L A L GI+ V ++L +DG+
Sbjct: 207 -----LIKASNYFLGLGIKKVFISLDADGIF 232
>gi|188587287|ref|YP_001918832.1| ribokinase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351974|gb|ACB86244.1| ribokinase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 345
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++LG + MI A+G D GN LL + + + T G++ D T
Sbjct: 39 GGKGANQAVALARLGGQVNMIGAVGDDDLGNNLLRNLEQEQIDTTGVQCLADTPTGNAFI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D G+ V + E L W+ Q I ++ L++ + A+ ++A
Sbjct: 99 TVDQQGKNTILVYPGANGE--LKTSWVPQHKELIQNSEYLLMQLETPLEVVEATAELADS 156
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V P + + +++K + +++PNE EL ++ ++ E I +H
Sbjct: 157 LGTKVILNPAPGQELSQ--NLLKRVHLLTPNETELSVIS-GMTTETREEQIAAARH---- 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
L + G+ VV+TLGS+G K + G T +R Y T
Sbjct: 210 -----------LTDLGVDQVVVTLGSEGAFHVDKNMGQQGTHGHHNTHCNHGTRGTYGT 257
>gi|300870234|ref|YP_003785105.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli 95/1000]
gi|431808926|ref|YP_007235824.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli P43/6/78]
gi|300687933|gb|ADK30604.1| carbohydrate kinase pfkB family [Brachyspira pilosicoli 95/1000]
gi|430782285|gb|AGA67569.1| PfkB family carbohydrate kinase [Brachyspira pilosicoli P43/6/78]
Length = 309
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 128/321 (39%), Gaps = 79/321 (24%)
Query: 1 VNYVLGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
+N GGV RN+ +S LG I+++G D+ G+ILL + KS + T I ++
Sbjct: 33 INICAGGVERNIVHNLSNLGLYNIKFITSIGNDIFGDILLNNIKSLNIDTSYIIKKGSST 92
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + I++ + ++ AV+ ++ ++K +T +++ I +A ++ +DA +
Sbjct: 93 TYMA--IMNSDKDMYLAVSDMDDLDKNITIEYLDSIKDIIKNAKLITIDAVIKREIFEYL 150
Query: 120 CKIAAECNIP---VWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
K N P + + VSV K+ I + K+I + N +E + +
Sbjct: 151 IK-----NFPDKKLLCDAVSVKKAENIKGLEKHIYALKLNSNEASFL------------L 193
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYG 236
D++ + E + A+ ++ G+ + +T G+ S KTKP
Sbjct: 194 DKDISTIEEGLE----AVSRFIDIGVSEIYITFAEKGICYAS-----------TKTKP-- 236
Query: 237 FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
H A +++ +GAGD + G + SI
Sbjct: 237 --------------------------------AHLNAPKVNILNASGAGDAFMAGIIYSI 264
Query: 297 SSGLDVMQSVAVDDAKTVYAA 317
+ D+ D K +AA
Sbjct: 265 YNNFDL-------DYKVKFAA 278
>gi|57098211|ref|XP_532917.1| PREDICTED: ribokinase [Canis lupus familiaris]
Length = 322
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 23/232 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D G+ +E+ K +STE + +D T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGSDYIENLKQNDISTEFTYQTQDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ I+ A V++ + P + +A
Sbjct: 111 II--VNNEGQNIIIIVAGANLLLNTEDLKKAATTINKAKVMICQLEIIPEISLEALTMAH 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + P D K
Sbjct: 169 SNGVKTLFNPAPAIADLDPRFYTLSD---VFCCNETE----AEILTGLAVGSPADAGK-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
A LVL+E+G +V++TLG++G ++ S+ I K KP
Sbjct: 220 ----------AALVLMERGCHVVIVTLGAEGCVMLSQTEPVPKHIPTEKVKP 261
>gi|293569449|ref|ZP_06680742.1| ribokinase [Enterococcus faecium E1071]
gi|294623448|ref|ZP_06702302.1| ribokinase [Enterococcus faecium U0317]
gi|430829815|ref|ZP_19447891.1| ribokinase [Enterococcus faecium E0269]
gi|430837570|ref|ZP_19455535.1| ribokinase [Enterococcus faecium E0680]
gi|431777769|ref|ZP_19566019.1| ribokinase [Enterococcus faecium E2560]
gi|431783474|ref|ZP_19571585.1| ribokinase [Enterococcus faecium E6012]
gi|291587843|gb|EFF19698.1| ribokinase [Enterococcus faecium E1071]
gi|291597143|gb|EFF28340.1| ribokinase [Enterococcus faecium U0317]
gi|430479563|gb|ELA56788.1| ribokinase [Enterococcus faecium E0269]
gi|430487223|gb|ELA63985.1| ribokinase [Enterococcus faecium E0680]
gi|430638837|gb|ELB74737.1| ribokinase [Enterococcus faecium E2560]
gi|430645144|gb|ELB80685.1| ribokinase [Enterococcus faecium E6012]
Length = 308
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++K G K + A+G D AG +L++ ++ G+ T I + T
Sbjct: 39 GGKGSNQAVSVAKQGKKLAFLGAVGQDSAGKQMLQNLENKGILTSYILQTNKAGTGTFVA 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D +GE V ++ + E L D IR+ I A VL++ S ++ + KIA E
Sbjct: 99 IVDNSGE-NTMVGTMGANETLLKED-IREVFSDI-EAKVLLLQMETSRESIIETMKIAKE 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
N+ +P +KY ++V+PN+ E
Sbjct: 156 KNMYTILDPAPA--DGYFEEALKYASLVTPNQQE 187
>gi|322708868|gb|EFZ00445.1| IdgA domain protein [Metarhizium anisopliae ARSEF 23]
Length = 799
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 57/345 (16%)
Query: 5 LGGVARNVAECMSKLGSKPYM--ISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID--- 59
+GGV NVA SK + S + D+AG+ ++ +GL T ++ + +
Sbjct: 444 IGGVGHNVALAAHLASSKTKVDFCSMVADDIAGSTVVSSLHQSGLDTAHVKMLQSKEHAG 503
Query: 60 --TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
TA I D N L A+A + ++ P+ R + +S L+VD N S ++
Sbjct: 504 SRTAQYVAINDANRNLVMAMADMGIFTQYSFPEEWRSTVK-ATSPRWLVVDGNWSASSIR 562
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYI-----------TVVSPNEDELVAMANA 166
I + N V FEPVSV KS+ + + + I + SPN EL AM
Sbjct: 563 EWVSIGKDHNAKVAFEPVSVAKSKSLFTNQRGIPKLDIFPHASVDMASPNTYELAAMYEV 622
Query: 167 ------LSGENMFRPID-------RNKH---SAESLFQTLKPAILVLLEKGIRLVVLTLG 210
L ++ F+ ID R++ ++ L T P V L I ++ LG
Sbjct: 623 AKENGYLDSQDWFKVIDAFGMTGARDRFVRLTSADLTDTGVPVQCVNLLPYIPTLLTKLG 682
Query: 211 SDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVH 270
+GVLL S R+ R + Y +R + P G + +
Sbjct: 683 PNGVLLTSILGRDDPRLRDRDAEEYILAR---------------ASPNHPTVGGIYMRLF 727
Query: 271 FPALPA-SVVRLTGAGDCLVGGTLASISSG------LDVMQSVAV 308
PA ++V + GAGD +G ++ ++ G +DV Q AV
Sbjct: 728 PPAEKVENIVSVNGAGDTFLGVLVSGLAQGGSVEKLIDVAQKGAV 772
>gi|258574529|ref|XP_002541446.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901712|gb|EEP76113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 774
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 144/364 (39%), Gaps = 64/364 (17%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLE--HWKSAGLSTEGIRR---Q 55
++ LGGV NVA S LGS S + D++G L S L +EGI+R
Sbjct: 383 ISQSLGGVGYNVALASSYLGSSVLFCSVVADDLSGRSALAVLEKGSENLRSEGIQRLASG 442
Query: 56 KDIDTAVVSNILDVNGELAAAVASVESIE---KFLTPDWIRQFIHHISSASVLMVDANLS 112
I TA I D EL A+A + +E + L D + + + + ++D N S
Sbjct: 443 SGIRTAQYIAINDAKKELVLAMADMSILELHSEKLNFDEFWEPLIRRTKPTWAVIDTNWS 502
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV----------------------KYI 150
P + ++ I EPVS K+ R+ S + + +
Sbjct: 503 PETVGRWIRLCKSHGIKTAVEPVSAPKATRLFSRISSENNKAADKPIFGPSNAAPTNQLV 562
Query: 151 TVVSPNEDELVAMANALSGENMF------RPIDR---NKHSAESLFQTLKPAILV---LL 198
+++PN EL +M +F + ID + F +L A +V +
Sbjct: 563 DIITPNRYELASMHTTAREAGLFDSPEWWKVIDSLSLPSVGSRDRFTSLTSASIVDEGIP 622
Query: 199 EKGIRL------VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSS 252
++ I+L +V LG +GVL+ R+ + PY + R
Sbjct: 623 QQSIQLLPFIPCIVTKLGQEGVLVTQLLRSGDSRLTDPEYAPY---------ILGRAVGG 673
Query: 253 RYSGAMEPAGGSQFFAVHFPALPA----SVVRLTGAGDCLVGGTLASISSG--LDVMQSV 306
G +P G + + FPA VV + GAGD L+G ++++++ D Q +
Sbjct: 674 STDGPGDPNVGGVYMRL-FPAAEKLEAHDVVSVNGAGDTLLGVLVSALAAAEKYDTAQKI 732
Query: 307 AVDD 310
V+D
Sbjct: 733 RVED 736
>gi|254183302|ref|ZP_04889894.1| ribokinase [Burkholderia pseudomallei 1655]
gi|184213835|gb|EDU10878.1| ribokinase [Burkholderia pseudomallei 1655]
Length = 310
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + + V+ + L P I I ++ ++++ ++ + + AA
Sbjct: 97 -IFVNPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIAIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|167746924|ref|ZP_02419051.1| hypothetical protein ANACAC_01636 [Anaerostipes caccae DSM 14662]
gi|167653884|gb|EDR98013.1| putative ribokinase [Anaerostipes caccae DSM 14662]
Length = 639
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 70/303 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N + +KLG + +I +G D+ + K G+ + G++R T
Sbjct: 363 GGKGINQSIGAAKLGHRVTLIGNVGSDIDSASVYNALKEYGVESFGVKRCNQEKTGQAFI 422
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G + ++ + LTP+ IR+ + ++ + + +A +C+IA E
Sbjct: 423 FVESSGH--SMISILSGANNILTPEDIRKRKRFFKNTGYCLIQSEIPLDTVAEACRIAHE 480
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
C +P SV + V+ + ++ PNE+EL + A S
Sbjct: 481 CGAKTILKP-SVC-GFIPSEVLSGVDILVPNEEELNEICPAQS----------------- 521
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
TL+ LLE GI +++TLG +G Y + DL K
Sbjct: 522 ---TLQEKTAALLEYGIETIIVTLGENGC--------------------YVRTADLEK-- 556
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
HFPA+P V TGA D + A + G + ++
Sbjct: 557 ------------------------HFPAVPFPSVDNTGASDAFISALAAYLLYGYSLEEA 592
Query: 306 VAV 308
V +
Sbjct: 593 VRI 595
>gi|297250091|ref|ZP_06933792.1| ribokinase [Brucella abortus bv. 5 str. B3196]
gi|297173960|gb|EFH33324.1| ribokinase [Brucella abortus bv. 5 str. B3196]
Length = 313
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|303312215|ref|XP_003066119.1| Indigoidine synthase A like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105781|gb|EER23974.1| Indigoidine synthase A like family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 845
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 65/351 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSA--GLSTEGIRRQKDI 58
++ LGGV NVA S LGS S + D++G L + A L EG++ +
Sbjct: 462 ISQSLGGVGYNVALASSYLGSSVLFCSVVANDISGRSALAALQKADKNLHFEGVQTLETA 521
Query: 59 DTAVVSNILDVNG---ELAAAVASVESIE---KFLTPDWIRQFIHHISSASVLMVDANLS 112
A + + VN EL A+A + +E + L D + + H + + ++DAN S
Sbjct: 522 AGARTAQYIAVNDAKKELVLAMADMSILELPSERLKFDEFWEPMIHRTKPTWAVIDANWS 581
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--------------------YITV 152
P A++ + I + FEPVS K+ R+ S K I +
Sbjct: 582 PEAMSRWVSLCKAHGIKIAFEPVSALKATRLFSKTKSGNIGNKPIFDPLHTAPTNHLIDI 641
Query: 153 VSPNEDELVAMANALSGENMFRPIDRNK---------HSAESLFQTLKPAILV---LLEK 200
++PN EL +M +F + K + F +L A +V + ++
Sbjct: 642 ITPNSIELASMHTTAREAGLFHSPEWWKIINSFSLPSAGSRDRFTSLTSAAIVDKGIPQQ 701
Query: 201 GIRL------VVLTLGSDGVLLCSKELLSSM--RIGLRKTKPYGFSRDLYKTVTSRCHSS 252
I+L +V LG G LL +LL S R+ + PY R +
Sbjct: 702 SIQLLPFIPCIVTKLGKHGALLT--QLLPSRDSRLTNPEYAPYILGR----------AAG 749
Query: 253 RYSGAMEPAGGSQFFAVHFPAL----PASVVRLTGAGDCLVGGTLASISSG 299
G E G + + FPA+ VV + GAGD L+G +++++ G
Sbjct: 750 SGDGDSETGIGGVYMRL-FPAVEKLEEGDVVSVNGAGDTLLGLLVSALAVG 799
>gi|23499772|ref|NP_699212.1| ribokinase [Brucella suis 1330]
gi|161620099|ref|YP_001593985.1| ribokinase [Brucella canis ATCC 23365]
gi|163844204|ref|YP_001621859.1| ribokinase [Brucella suis ATCC 23445]
gi|225628492|ref|ZP_03786526.1| ribokinase [Brucella ceti str. Cudo]
gi|256014800|ref|YP_003104809.1| ribokinase [Brucella microti CCM 4915]
gi|260568650|ref|ZP_05839119.1| ribokinase [Brucella suis bv. 4 str. 40]
gi|261216644|ref|ZP_05930925.1| ribokinase [Brucella ceti M13/05/1]
gi|261313881|ref|ZP_05953078.1| ribokinase [Brucella pinnipedialis M163/99/10]
gi|261318878|ref|ZP_05958075.1| ribokinase [Brucella pinnipedialis B2/94]
gi|261319513|ref|ZP_05958710.1| ribokinase [Brucella ceti M644/93/1]
gi|261749770|ref|ZP_05993479.1| ribokinase [Brucella suis bv. 5 str. 513]
gi|261756239|ref|ZP_05999948.1| ribokinase [Brucella sp. F5/99]
gi|265987119|ref|ZP_06099676.1| ribokinase [Brucella pinnipedialis M292/94/1]
gi|340791772|ref|YP_004757236.1| ribokinase [Brucella pinnipedialis B2/94]
gi|376277996|ref|YP_005108029.1| ribokinase, putative [Brucella suis VBI22]
gi|384222558|ref|YP_005613723.1| ribokinase [Brucella suis 1330]
gi|23463336|gb|AAN33217.1| ribokinase, putative [Brucella suis 1330]
gi|161336910|gb|ABX63214.1| ribokinase [Brucella canis ATCC 23365]
gi|163674927|gb|ABY39037.1| ribokinase [Brucella suis ATCC 23445]
gi|225616338|gb|EEH13386.1| ribokinase [Brucella ceti str. Cudo]
gi|255997460|gb|ACU49147.1| ribokinase, putative [Brucella microti CCM 4915]
gi|260155315|gb|EEW90396.1| ribokinase [Brucella suis bv. 4 str. 40]
gi|260921733|gb|EEX88301.1| ribokinase [Brucella ceti M13/05/1]
gi|261292203|gb|EEX95699.1| ribokinase [Brucella ceti M644/93/1]
gi|261298101|gb|EEY01598.1| ribokinase [Brucella pinnipedialis B2/94]
gi|261302907|gb|EEY06404.1| ribokinase [Brucella pinnipedialis M163/99/10]
gi|261736223|gb|EEY24219.1| ribokinase [Brucella sp. F5/99]
gi|261739523|gb|EEY27449.1| ribokinase [Brucella suis bv. 5 str. 513]
gi|264659316|gb|EEZ29577.1| ribokinase [Brucella pinnipedialis M292/94/1]
gi|340560231|gb|AEK55468.1| ribokinase [Brucella pinnipedialis B2/94]
gi|343384006|gb|AEM19497.1| ribokinase, putative [Brucella suis 1330]
gi|358259434|gb|AEU07167.1| ribokinase, putative [Brucella suis VBI22]
Length = 313
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|386742979|ref|YP_006216158.1| putative sugar kinase [Providencia stuartii MRSN 2154]
gi|384479672|gb|AFH93467.1| putative sugar kinase [Providencia stuartii MRSN 2154]
Length = 306
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 37 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN A + V+ KFL+P+ I + + ++++ + + + +
Sbjct: 96 -IFVNPNSANRILIVKGANKFLSPEDIERAADDLKKCKLIVLQLEVQLETVYHAIAFGNK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P ++ + + V PNE EL + N P+D
Sbjct: 155 HNIPVLLNPAPAQRTLDLDFACRCDFFV-PNETELEILTNM--------PVDS------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ ++ A LL+KG++ +++TLG G L +++
Sbjct: 199 -MENIRRAAKSLLDKGLKNLIVTLGDKGALWMTRD 232
>gi|188026420|ref|ZP_02962024.2| hypothetical protein PROSTU_04112 [Providencia stuartii ATCC 25827]
gi|188020020|gb|EDU58060.1| ribokinase [Providencia stuartii ATCC 25827]
Length = 310
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 41 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN A + V+ KFL+P+ I + + ++++ + + + +
Sbjct: 100 -IFVNPNSANRILIVKGANKFLSPEDIERAADDLKKCKLIVLQLEVQLETVYHAIAFGNK 158
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P ++ + + V PNE EL + N P+D
Sbjct: 159 HNIPVLLNPAPAQRTLDLDFACRCDFFV-PNETELEILTNM--------PVDS------- 202
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ ++ A LL+KG++ +++TLG G L +++
Sbjct: 203 -MENIRRAAKSLLDKGLKNLIVTLGDKGALWMTRD 236
>gi|261323720|ref|ZP_05962917.1| ribokinase [Brucella neotomae 5K33]
gi|261299700|gb|EEY03197.1| ribokinase [Brucella neotomae 5K33]
Length = 275
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|312129162|ref|YP_003996502.1| ribokinase [Leadbetterella byssophila DSM 17132]
gi|311905708|gb|ADQ16149.1| ribokinase [Leadbetterella byssophila DSM 17132]
Length = 304
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++++G + I+ G D+ G +E + S ++T+ + +D + V
Sbjct: 43 GGKGANQAVAVARMGGQVTFITKTGNDLFGRQSMELYNSENINTDYVFSDEDHPSGVALI 102
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+DV GE VA LT I + I A +L++ + + + KIAAE
Sbjct: 103 SVDVYGENCILVAP--GANAALTTADIEKARKEIEEAEILLMQLEIPMETVEYAAKIAAE 160
Query: 126 CNIPVWFEPV-SVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ V P + T S + +K + +++PN++E A LSG + R D + SA+
Sbjct: 161 KGVKVALNPAPAQTLSNEL---LKCLYIITPNKNE----AEILSGIKV-RDWDSAQKSAD 212
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
+ EKG+ +VV+TLG G L+ KE S R+ K +
Sbjct: 213 RIS-----------EKGVDIVVVTLGGLGALI--KEGSSYYRVEAEKVE 248
>gi|358398697|gb|EHK48048.1| hypothetical protein TRIATDRAFT_155276 [Trichoderma atroviride IMI
206040]
Length = 783
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 145/353 (41%), Gaps = 55/353 (15%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMI--SALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
++ +GGV NVA + + + S +G D+AG+ +L +++GL +++
Sbjct: 424 ISQSIGGVGHNVALAAHRASRQAQVKFSSMVGDDIAGDTVLSALEASGLDPRYVKKLDRT 483
Query: 59 D-----TAVVSNILDVNGELAAAVASVESIEKFLTP-DWIRQFIHHISSASVLMVDANLS 112
+ TA I D + L A+A + + L P DW + L+VD N S
Sbjct: 484 EHPGSRTAQYVAINDSSKNLVMAMADMGIFTQHLFPEDWKSTI--KATDPKWLVVDGNWS 541
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-----------YITVVSPNEDELV 161
P + A E V FEPVSV KS+ + + + + SPN EL
Sbjct: 542 PKGIRTWVHSANEHGSKVAFEPVSVEKSKSLFGPQRGVPPLGVFPNQSVDLSSPNIYELS 601
Query: 162 AMANA------LSGENMFRPID-------RNKH---SAESLFQTLKPAILVLLEKGIRLV 205
AM +A L F ID R+K ++ L P + L I +
Sbjct: 602 AMYSAAKDNGYLDSAEWFEVIDSFGMVGARDKFVRLTSMELTDAGVPVQSIQLLPYIPTL 661
Query: 206 VLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQ 265
+ LGS GVLL + L K P R+ + + +R ++G PA G
Sbjct: 662 ITKLGSKGVLLTTI---------LGKDDPRLRDRESEEFILTRS----FNG--NPAIGGV 706
Query: 266 FFAVHFPALPA--SVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYA 316
+ + FP + +VV + G GD +G ++ ++ G V + V V VY+
Sbjct: 707 YMRL-FPPVEKVENVVSVNGVGDTFLGVLISGLAQGGRVDKLVDVAQRGAVYS 758
>gi|347549666|ref|YP_004855994.1| putative carbohydrate kinase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346982737|emb|CBW86758.1| Putative carbohydrate kinase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 372
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 24/217 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAG---LSTEGIRRQKDIDTAV 62
GGVARNV E + +LG + +++A G D E KSA ++ + + I T
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSD----WEAVKSASNTYMNLDYVTAFPSIATGS 155
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ +L+ NG+L A+A +E+ + LTPD + + +S AS ++ D N L
Sbjct: 156 YTAVLENNGDLLVALADMEAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSF 214
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A +IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 215 AEINSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLEMTIESD--- 263
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A LE G+ V++T GS G + +K
Sbjct: 264 -----EDWRLAAEKWLELGVENVIVTNGSKGAVAANK 295
>gi|17988433|ref|NP_541066.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|260564166|ref|ZP_05834651.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|265989366|ref|ZP_06101923.1| ribokinase [Brucella melitensis bv. 1 str. Rev.1]
gi|17984217|gb|AAL53330.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|260151809|gb|EEW86902.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|263000035|gb|EEZ12725.1| ribokinase [Brucella melitensis bv. 1 str. Rev.1]
Length = 313
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|261215514|ref|ZP_05929795.1| ribokinase [Brucella abortus bv. 3 str. Tulya]
gi|260917121|gb|EEX83982.1| ribokinase [Brucella abortus bv. 3 str. Tulya]
Length = 313
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLITLSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLITAD 240
>gi|324518033|gb|ADY46985.1| Ribokinase [Ascaris suum]
Length = 308
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++LG K MI +G D+ G + +E+ + +G++T+ I + + TA +
Sbjct: 38 GGRGANQAAQIARLGGKVIMIGMVGNDIFGPLNIENLRKSGVNTDYIEKSNEAGTATATV 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ GE + V ++E + P Q H I+++ +L+ + L + +IA +
Sbjct: 98 TVTEEGENSVVVILGANLE--IKPSRAEQLEHVIANSKMLLCQYEIPYDTLKCAFEIARK 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
N+ V+F T I S++K + V+ N E LSG RN E
Sbjct: 156 NNVTVFFNFSPSTPEFDI-SILKLVDVLCTNRSE----TENLSG--------RNVRCVEE 202
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELL 222
+K +++ G + V+ TLG+ G ++ +++ L
Sbjct: 203 AVMAVK----TIIKLGPKAVITTLGAKGAVVATEDGL 235
>gi|320527794|ref|ZP_08028962.1| kinase, PfkB family [Solobacterium moorei F0204]
gi|320131731|gb|EFW24293.1| kinase, PfkB family [Solobacterium moorei F0204]
Length = 311
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++ GGV RN+A+ + LG ++ D G + E K G+ +D+ +
Sbjct: 32 ISIAYGGVGRNIAQICALLGENIKFVTCFSGDSYGQSMKEDCKRLGMDVSMSSTVEDLPS 91
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP-----A 115
++ +LD N ++ ++ + I + + ++ + + ++++D+NL A
Sbjct: 92 SMYIALLDNNRDMKLGMSDMR-ILRRMDAKMLQPILETLHEDDIIIIDSNLDMESIEYIA 150
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP 175
+ A +IAA +PVS K+ R+ SV+ ++ + PN+ E A+ L+G +
Sbjct: 151 IHAKARIAA--------DPVSAHKASRLKSVLNHLDIFKPNQFE----ASELTGIWI--- 195
Query: 176 IDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
E+ Q L +E G++ V++++ G+LL + E
Sbjct: 196 -----KDEETARQNLD----WFIEHGVKEVIISMADRGILLGTAE 231
>gi|383192267|ref|YP_005202395.1| ribokinase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371590525|gb|AEX54255.1| ribokinase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 309
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A + G+ I+ +G D G + + S + T+ I KD T V
Sbjct: 39 FGGKGANQAVAAGRSGADISFIACVGDDDIGERVRKQLASDRIDTQPIEAIKDSTTGVA- 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ VN E + K +TP+++ ++ I SAS L++ + A+ KIA
Sbjct: 98 -LIFVNAEGENVIGIDAGANKAVTPEYLDRYKQQIISASALLMQLESPLETVIAAAKIAK 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ + V P + ++ + +++PNE E A L+G +D N+ +
Sbjct: 157 DNDTQVILNPAPACELP--DELLARVDMITPNETE----AEKLTG----IKVDNNEDADR 206
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
A VL +KGI V++TLGS GV L
Sbjct: 207 --------AAKVLHDKGIATVIITLGSKGVWL 230
>gi|237510042|ref|ZP_04522757.1| ribokinase [Burkholderia pseudomallei MSHR346]
gi|235002247|gb|EEP51671.1| ribokinase [Burkholderia pseudomallei MSHR346]
Length = 310
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + + V+ + L P I I ++ ++++ ++ + + AA
Sbjct: 97 -IFVNPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIAIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGMPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|376270554|ref|YP_005113599.1| ribokinase [Brucella abortus A13334]
gi|363401726|gb|AEW18695.1| ribokinase [Brucella abortus A13334]
Length = 306
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 42 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 101
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 102 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 159
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 160 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 209
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 210 ------LLERGPKIVILKLGSRGALLITAD 233
>gi|393218586|gb|EJD04074.1| hypothetical protein FOMMEDRAFT_133422 [Fomitiporia mediterranea
MF3/22]
Length = 806
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 141/350 (40%), Gaps = 65/350 (18%)
Query: 1 VNYVLGGVARNVAECMSKL---GSKP------YMISALGLDMAGNILLEHWKSAGLSTEG 51
V +GGVARN+AE ++ GS ++S +G D LL+ + G+ ++G
Sbjct: 418 VELTVGGVARNIAEAAHRVLSSGSNSEDRDATLLVSPIGEDAFAPFLLDEHQLLGMRSDG 477
Query: 52 IRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL 111
+ TAV +LD +G L VA ++ + I + + S+++VD NL
Sbjct: 478 FIPTSESRTAVCDMVLDASGALVGGVADMDIVPMVPEQTVIDRLGEE--NPSLVVVDGNL 535
Query: 112 SPPALAASCKIAAECNIPV-WFEPVSVTKSRRITSVV--------------KYITVVSPN 156
SP +++ K + P+ EP S++KS I + +T +PN
Sbjct: 536 SPTTMSSILKHCWSRSDPIPSNEPTSISKSTSILPGILDHLMTSKKDGIHHSPVTYAAPN 595
Query: 157 EDELVAMANALSGE--------------NMFRPIDRNKHSAESLFQTLKPAILV------ 196
EL M + E N F + E L + +PA +
Sbjct: 596 TLELAHMYREANSETRGMINHRVWWEVLNNFNLGSEWRMDLEQLAR--RPACPIKDKGDL 653
Query: 197 --LLEKGIRLVVLTL---GSDGVLLCSKE-LLSSMRIGLRKTKPYGFSRDLYKTVTSRCH 250
LL+ GI + + L + V+ C + ++ MRI G D + R +
Sbjct: 654 SFLLKDGIAQMAVNLLPFFQNLVIKCGERGVVVVMRI-------CGEDVDSSAWMMERSN 706
Query: 251 SSR-YSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASI 296
R Y A G HFPA+P +V +TGAGD LVG AS+
Sbjct: 707 PLRGYIVAKGLEGREIVILKHFPAIPMENDEIVSVTGAGDSLVGALSASL 756
>gi|109102478|ref|XP_001100564.1| PREDICTED: ribokinase isoform 2 [Macaca mulatta]
Length = 322
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGATTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ G+ + V L + +R + IS A V++ ++P + +A
Sbjct: 111 IIVNNGGQ--NIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVNSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL +G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLRRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|62316966|ref|YP_222819.1| ribokinase [Brucella abortus bv. 1 str. 9-941]
gi|83268961|ref|YP_418252.1| ribokinase:carbohydrate kinase [Brucella melitensis biovar Abortus
2308]
gi|189022238|ref|YP_001931979.1| Ribokinase [Brucella abortus S19]
gi|237816530|ref|ZP_04595522.1| ribokinase [Brucella abortus str. 2308 A]
gi|260544204|ref|ZP_05820025.1| ribokinase [Brucella abortus NCTC 8038]
gi|260759459|ref|ZP_05871807.1| ribokinase [Brucella abortus bv. 4 str. 292]
gi|260762702|ref|ZP_05875034.1| ribokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260882982|ref|ZP_05894596.1| ribokinase [Brucella abortus bv. 9 str. C68]
gi|423169158|ref|ZP_17155860.1| ribokinase [Brucella abortus bv. 1 str. NI435a]
gi|423171407|ref|ZP_17158081.1| ribokinase [Brucella abortus bv. 1 str. NI474]
gi|423174861|ref|ZP_17161531.1| ribokinase [Brucella abortus bv. 1 str. NI486]
gi|423176739|ref|ZP_17163405.1| ribokinase [Brucella abortus bv. 1 str. NI488]
gi|423180839|ref|ZP_17167479.1| ribokinase [Brucella abortus bv. 1 str. NI010]
gi|423183970|ref|ZP_17170606.1| ribokinase [Brucella abortus bv. 1 str. NI016]
gi|423187119|ref|ZP_17173732.1| ribokinase [Brucella abortus bv. 1 str. NI021]
gi|423189540|ref|ZP_17176149.1| ribokinase [Brucella abortus bv. 1 str. NI259]
gi|62197159|gb|AAX75458.1| hypothetical ribokinase [Brucella abortus bv. 1 str. 9-941]
gi|82939235|emb|CAJ12170.1| Ribokinase:Carbohydrate kinase, PfkB [Brucella melitensis biovar
Abortus 2308]
gi|189020812|gb|ACD73533.1| Ribokinase [Brucella abortus S19]
gi|237787343|gb|EEP61559.1| ribokinase [Brucella abortus str. 2308 A]
gi|260097475|gb|EEW81349.1| ribokinase [Brucella abortus NCTC 8038]
gi|260669777|gb|EEX56717.1| ribokinase [Brucella abortus bv. 4 str. 292]
gi|260673123|gb|EEX59944.1| ribokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260872510|gb|EEX79579.1| ribokinase [Brucella abortus bv. 9 str. C68]
gi|374537001|gb|EHR08519.1| ribokinase [Brucella abortus bv. 1 str. NI435a]
gi|374537493|gb|EHR09005.1| ribokinase [Brucella abortus bv. 1 str. NI474]
gi|374537629|gb|EHR09140.1| ribokinase [Brucella abortus bv. 1 str. NI486]
gi|374547369|gb|EHR18824.1| ribokinase [Brucella abortus bv. 1 str. NI010]
gi|374547774|gb|EHR19227.1| ribokinase [Brucella abortus bv. 1 str. NI016]
gi|374553316|gb|EHR24736.1| ribokinase [Brucella abortus bv. 1 str. NI488]
gi|374556846|gb|EHR28246.1| ribokinase [Brucella abortus bv. 1 str. NI021]
gi|374557094|gb|EHR28493.1| ribokinase [Brucella abortus bv. 1 str. NI259]
Length = 313
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLITAD 240
>gi|355565573|gb|EHH22002.1| hypothetical protein EGK_05181 [Macaca mulatta]
gi|355751217|gb|EHH55472.1| hypothetical protein EGM_04685 [Macaca fascicularis]
Length = 322
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGATTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ G+ + V L + +R + IS A V++ ++P + +A
Sbjct: 111 IIVNNGGQ--NIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVNSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL +G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLRRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|294930415|ref|XP_002779553.1| phosphofructokinase, putative [Perkinsus marinus ATCC 50983]
gi|239888891|gb|EER11348.1| phosphofructokinase, putative [Perkinsus marinus ATCC 50983]
Length = 158
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV ++AE M+ LG+ P +ISA+G D G L++ + G+ T ++ T +
Sbjct: 63 GGVGLSLAESMAMLGATPGLISAVGRDSHGEALMQRLRQIGVPTTNVKELTSESTGTCTL 122
Query: 66 ILDVNGELAAAVASVESIEKFLTP 89
+LD GEL + VA+++ ++ + P
Sbjct: 123 VLDGRGELISGVAAMDIFDRLVHP 146
>gi|282600414|ref|ZP_06257590.1| ribokinase [Providencia rustigianii DSM 4541]
gi|282565277|gb|EFB70812.1| ribokinase [Providencia rustigianii DSM 4541]
Length = 329
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 60 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 118
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + ++ V+ KFL+P+ I + + ++++ + + + +
Sbjct: 119 -IFVNQNSSNSILIVKGANKFLSPEDIDRAAEDLKKCKLIVLQLEVQLETVYHAIAFGNK 177
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P +S + + V PNE EL + N P+D
Sbjct: 178 HNIPVLLNPAPAQRSLDLDFACRCDFFV-PNETELEILTNM--------PVDT------- 221
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LL+KG++ +++TLG G L +++
Sbjct: 222 -LDNVRRAAQSLLDKGLKNLIVTLGDKGALWMTRD 255
>gi|239617001|ref|YP_002940323.1| ribokinase [Kosmotoga olearia TBF 19.5.1]
gi|239505832|gb|ACR79319.1| ribokinase [Kosmotoga olearia TBF 19.5.1]
Length = 300
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+NY GG N A KLG++ Y ++ +G D +E K AGL +GI++ +D+
Sbjct: 31 LNYFPGGKGANQAVAAKKLGAEVYFLTCVGNDGNAQFAVESLKKAGLE-KGIKK---VDS 86
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
I++V + +LT + + A VL++ + A +
Sbjct: 87 PNGMAIIEVEASGNNRIVIYPGANAYLTESVVESARDELLKADVLLLQNEIPFSATLHAA 146
Query: 121 KIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
++ E V F+P S+ IT + +Y+ +++PNE E V++ L E + + + +
Sbjct: 147 RLFHEAGKLVIFDPAP---SKDITKEIFQYVDIITPNESEAVSLVGDLPPEMLIKELKK 202
>gi|91224727|ref|ZP_01259987.1| ribokinase [Vibrio alginolyticus 12G01]
gi|91190273|gb|EAS76542.1| ribokinase [Vibrio alginolyticus 12G01]
Length = 305
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 27/241 (11%)
Query: 2 NY--VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
NY + GG N A ++L + I+ +G D G + E++K G+ G++ Q +
Sbjct: 32 NYQVIPGGKGANQAVAAARLNADIGFIACVGDDSFGINIRENFKMDGIDITGVKMQPNCP 91
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + + +GE + + S E+ K LT + I + I A L++ + +
Sbjct: 92 TGIAMIQVSDSGENSICI-SAEANAK-LTAEAIEPDLERIRQADYLLMQLETPMCGIEKA 149
Query: 120 CKIAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDR 178
+IA + V P +R ++ ++ YI V++PNE E A L+G +
Sbjct: 150 ARIAKDAKTNVILNPAP---ARELSDELLSYIDVITPNETE----AEVLTGIT----VTD 198
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRIGLRKTKPY 235
N+ + E A VL KGI +V++TLG+ GV L E++S R+ T
Sbjct: 199 NESAQE--------AANVLHGKGIEIVMITLGAKGVWLSQNGRGEIISGFRVEATDTTAA 250
Query: 236 G 236
G
Sbjct: 251 G 251
>gi|387817834|ref|YP_005678179.1| ribokinase [Clostridium botulinum H04402 065]
gi|322805876|emb|CBZ03441.1| ribokinase [Clostridium botulinum H04402 065]
Length = 303
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A ++L S M+S +G D+ G ++++K+ G++T+ + QK+ + V
Sbjct: 36 FGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGVNTDFVTVQKNQASGVAP 95
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D E ++ ++ K L+P I + S++++ + + + A
Sbjct: 96 IFVD--RESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFAN 153
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ NI V P TK V K V NE EL + N S
Sbjct: 154 KNNISVLLNPAPATKELDFNYVYKCDFFV-LNETELEILTN---------------KSVN 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ + +K A ++ +KG++ V++T+GS G+L +K+
Sbjct: 198 TIGE-IKEAAHLIGDKGVKNVIVTMGSKGLLWINKD 232
>gi|213407204|ref|XP_002174373.1| carbohydrate kinase [Schizosaccharomyces japonicus yFS275]
gi|212002420|gb|EEB08080.1| carbohydrate kinase [Schizosaccharomyces japonicus yFS275]
Length = 724
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 140/339 (41%), Gaps = 64/339 (18%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVA N+A S + + ++S +G D+ G+ + S L + +++Q + +
Sbjct: 405 IGGVAHNIARAASLVDANVKLVSCIGDDVQGHQIANLLNSENLQFKLVQKQNS-KSCCYT 463
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIH-HISSASVLMVDANLSPPALAASCKIA 123
I D G L A A + IE D IH I +A ++ +D N+S ++ K
Sbjct: 464 AINDREGSLILAAADMRIIEDMTYSD-----IHDDIQAAKIICMDGNISESLISDVVKNK 518
Query: 124 AECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDELVAMANALSGENMFRPID---- 177
E N + +EP SV KS +I ++ I +++PN EL A+ +A+ ++F
Sbjct: 519 KE-NQLLCYEPTSVPKSLKILPSLQSGNIDIITPNLLELDAIYSAVEKTSLFDTDSWWSR 577
Query: 178 RNKHSAESLF-QTLKPAILVL----------LEKGIRL------VVLTLGSDGVLLCSKE 220
N S F + L + L ++K I+L ++L LGS G+LL S+
Sbjct: 578 LNMFGITSDFSEKLSNYVTKLGLPNLTNHGTIQKCIKLLPFLPTILLKLGSSGILLFSRS 637
Query: 221 LLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVR 280
DLY++ S P P L V
Sbjct: 638 AF----------------MDLYRSPNSLVTPGNVVIKYYPT----------PKLITDAVN 671
Query: 281 LTGAGDCLVGGTLASISSGLDVMQSVAVDDA-KTVYAAA 318
+G GD VG L+ + M++V VD A +T AA
Sbjct: 672 SSGTGDTFVGVCLSLL------MKNVRVDKAIQTAQEAA 704
>gi|408785529|ref|ZP_11197274.1| carbohydrate kinase [Rhizobium lupini HPC(L)]
gi|408488677|gb|EKJ96986.1| carbohydrate kinase [Rhizobium lupini HPC(L)]
Length = 313
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G + E + AG+ D T +
Sbjct: 37 GGGGFNAARNLSRLGFQVRIIAPRGGDVTGEAVAEAARQAGVEDTPFTFL-DRRTPSYTA 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ G L A+A ++ + K TP +R I+++ +L+ DANL LAA +A
Sbjct: 96 ILEREGNLVIALADMD-LYKLFTPRRLKVRAVREAITASDILLCDANLPEDTLAALGLVA 154
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 155 RACEKPLAAIAISPAKAVKLKAALADIDILFMNEAE----ARALTGET 198
>gi|320040109|gb|EFW22043.1| hypothetical protein CPSG_02200 [Coccidioides posadasii str.
Silveira]
Length = 461
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 65/351 (18%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSA--GLSTEGIRRQKDI 58
++ LGGV NVA S LGS S + D++G L + A L EG++ +
Sbjct: 78 ISQSLGGVGYNVALASSYLGSSVLFCSVVANDISGRSALAALQKADKNLHFEGVQTLETA 137
Query: 59 DTAVVSNILDVNG---ELAAAVASVESIE---KFLTPDWIRQFIHHISSASVLMVDANLS 112
A + + VN EL A+A + +E + L D + + H + + ++DAN S
Sbjct: 138 AGARTAQYIAVNDAKKELVLAMADMSILELPSERLKFDEFWEPMIHRTKPTWAVIDANWS 197
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--------------------YITV 152
P A++ + I + FEPVS K+ R+ S K I +
Sbjct: 198 PEAMSRWVSLCKAHGIKIAFEPVSALKATRLFSKTKSGNIGNKPIFDPLHTAPTNHLIDI 257
Query: 153 VSPNEDELVAMANALSGENMFRPIDRNK---------HSAESLFQTLKPAILV---LLEK 200
++PN EL +M +F + K + F +L A +V + ++
Sbjct: 258 ITPNSIELASMHTTAREAGLFHSPEWWKIINSFSLPSAGSRDRFTSLTSAAIVDKGIPQQ 317
Query: 201 GIRL------VVLTLGSDGVLLCSKELLSSM--RIGLRKTKPYGFSRDLYKTVTSRCHSS 252
I+L +V LG G LL +LL S R+ + PY R +
Sbjct: 318 SIQLLPFIPCIVTKLGKHGALLT--QLLPSRDSRLTNPEYAPYILGR----------AAG 365
Query: 253 RYSGAMEPAGGSQFFAVHFPAL----PASVVRLTGAGDCLVGGTLASISSG 299
G E G + + FPA+ VV + GAGD L+G +++++ G
Sbjct: 366 SGDGDSETGIGGVYMRL-FPAVEKLEEGDVVSVNGAGDTLLGLLVSALAVG 415
>gi|401883123|gb|EJT47357.1| hypothetical protein A1Q1_03828 [Trichosporon asahii var. asahii
CBS 2479]
Length = 682
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 45/319 (14%)
Query: 1 VNYVLGGVARNVAECMSKL--GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
V GGV RN+A L + ++S +G D +L L T+G+ ++
Sbjct: 363 VQLTAGGVGRNLARAAQALLPDNAVQLVSPVGTDGLAAVLKSEMADGALRTDGLLPREGR 422
Query: 59 DTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
+ V + GEL+ VA + +E D S+A +++ D NLS ++AA
Sbjct: 423 TASCV--LFLSAGELSHGVADMSIVETLSASDIAASLP---STAELVVFDLNLSSSSVAA 477
Query: 119 SCKIAAECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANAL--------S 168
+ AE N+ + +P SV K+ R + +T +PN EL A+ +AL +
Sbjct: 478 LLQTCAERNLRTFCDPTSVAKTPRLLPGLLNGGLTHFAPNLAELDALHSALEPALDDTPA 537
Query: 169 GENMFRPID------RNKHSAESLFQTLKPAILVLLEKGIRLVV-LTLGSDGVLLCSKEL 221
GE + ++ + + ES F+++ V IR VV LT D V L +
Sbjct: 538 GEAAWEAVNALNLGAEFRAAVESRFRSVD---WVGQTGAIRKVVGLTPFMDNVWLKAG-- 592
Query: 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV-HFPA-LPASVV 279
+ + LR + RD K V+ R ++ G Q+ + H+PA + V+
Sbjct: 593 -AGGVLSLR----FQDKRD-AKGVSQRIEHGKHKG--------QWLNIRHYPAPVVEGVL 638
Query: 280 RLTGAGDCLVGGTLASISS 298
TGAGD L G ++S+S+
Sbjct: 639 NTTGAGDTLAGSLISSLST 657
>gi|417557156|ref|ZP_12208208.1| ribokinase [Gardnerella vaginalis 315-A]
gi|333601797|gb|EGL13237.1| ribokinase [Gardnerella vaginalis 315-A]
Length = 303
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++GSK M++ +G D+ + +++ G+ ++ + R T+ V+
Sbjct: 37 GGKGANQAVAASRMGSKVLMVTRVGNDVFAENTINNFEKNGIDSKFVMRTD--ATSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ + ++ V+ L P+ + + IS ++++ + + A+ ++ AE
Sbjct: 95 IF-VDPQSRNSIIIVKGANAKLKPNDVEKARSEISKCKLIVLQLEIPLETVYATIRMGAE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV P + + + ++ + PNE EL + L+G P+D +
Sbjct: 154 LGVPVLLNPAPADPALSLEN-IRNCEFIVPNESEL----SLLTG----MPVDTS------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + A +LL+ GI V++TLGS G LL + E
Sbjct: 199 --EDITNAARMLLQSGIPNVIVTLGSKGALLVNSE 231
>gi|218779468|ref|YP_002430786.1| ribokinase [Desulfatibacillum alkenivorans AK-01]
gi|218760852|gb|ACL03318.1| ribokinase [Desulfatibacillum alkenivorans AK-01]
Length = 544
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 107/286 (37%), Gaps = 65/286 (22%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A +KLG + M+ LG D+ G L ++K G++ + ++ + V
Sbjct: 39 FGGKGANQAVMAAKLGGEVAMVGKLGRDVFGENTLANFKKLGVNVSHVHFTEEAFSGVAP 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D NG A ++ V L+ + IR + I+ + VL+ + + +IA
Sbjct: 99 IAVDDNG--ANSIIIVTGASDLLSAEEIRAAENAIAKSKVLVCQLEIPMEQNLEALRIAR 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ N+P F P + + + + PNE E L+G P++ + + +
Sbjct: 157 KNNVPTIFNPAP-ARPGLPDELYQLSDIFCPNESE----TEILTG----MPVETMEQAEQ 207
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
A LLE+G + V+LTLG G LL
Sbjct: 208 --------AAKALLERGPKTVILTLGERGCLLVD-------------------------- 233
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVG 290
A G++ H P + TGAGDC VG
Sbjct: 234 ----------------ANGAR----HIPTRKVEAIDTTGAGDCFVG 259
>gi|406702491|gb|EKD05507.1| hypothetical protein A1Q2_00268 [Trichosporon asahii var. asahii
CBS 8904]
Length = 682
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 45/319 (14%)
Query: 1 VNYVLGGVARNVAECMSKL--GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDI 58
V GGV RN+A L + ++S +G D +L L T+G+ ++
Sbjct: 363 VQLTAGGVGRNLARAAQALLPDNAVQLVSPVGTDGLAAVLKSEMADGALRTDGLLPREGR 422
Query: 59 DTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA 118
+ V + GEL+ VA + +E D S+A +++ D NLS ++AA
Sbjct: 423 TASCV--LFLSAGELSHGVADMSIVETLSASDIAASLP---STAELVVFDLNLSSSSVAA 477
Query: 119 SCKIAAECNIPVWFEPVSVTKSRR--ITSVVKYITVVSPNEDELVAMANAL--------S 168
+ AE N+ + +P SV K+ R + +T +PN EL A+ +AL +
Sbjct: 478 LLQTCAERNLRTFCDPTSVAKTPRLLPGLLNGGLTHFAPNLAELDALHSALEPALDDTPA 537
Query: 169 GENMFRPID------RNKHSAESLFQTLKPAILVLLEKGIRLVV-LTLGSDGVLLCSKEL 221
GE + ++ + + ES F+++ V IR VV LT D V L +
Sbjct: 538 GEAAWEAVNALNLGAEFRAAVESRFRSVD---WVGQTGAIRKVVGLTPFMDNVWLKAG-- 592
Query: 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV-HFPA-LPASVV 279
+ + LR + RD K V+ R ++ G Q+ + H+PA + V+
Sbjct: 593 -AGGVLSLR----FQDKRD-AKGVSQRIEHGKHKG--------QWLNIRHYPAPVVEGVL 638
Query: 280 RLTGAGDCLVGGTLASISS 298
TGAGD L G ++S+S+
Sbjct: 639 NTTGAGDTLAGSLISSLST 657
>gi|417361923|ref|ZP_12135701.1| Fructokinase [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353582749|gb|EHC43311.1| Fructokinase [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 319
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 62/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG + NV C+++LG + I LG D AG L + ++ G+ +R D+ +AV+
Sbjct: 30 GGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVSSLRLDADLTSAVLIV 89
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHH--ISSASVLMVDANLSPPALAASCKIA 123
L +GE + + +++P + F + +S+ + D+ L + ++
Sbjct: 90 NLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDSPAREACLEGARRM- 148
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
E V F+ +K R T + EL+A + AL+ + + S
Sbjct: 149 REAGGYVLFDVNLRSKMWRNTDEIP----------ELIARSAALASICKVSADELCQLSG 198
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
S +Q + L + G +++LG+DG LL + E
Sbjct: 199 ASHWQDAR---YYLRDLGCDTTIISLGADGALLITAE----------------------- 232
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+F HFPAL VV TGAGD VGG L ++S
Sbjct: 233 --------------------GEF---HFPALRVDVVDTTGAGDAFVGGLLFTLS 263
>gi|89101369|ref|ZP_01174155.1| carbohydrate kinase, PfkB family protein, partial [Bacillus sp.
NRRL B-14911]
gi|89083915|gb|EAR63130.1| carbohydrate kinase, PfkB family protein [Bacillus sp. NRRL
B-14911]
Length = 260
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 19 LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78
LG +++A+G D G+ LL + K + + + T + +LD +GE+ A A
Sbjct: 1 LGCDASLMTAVGDDAEGSWLLGYTKDF-VDISPSQTLPNTATGTYTAVLDHDGEMTVAFA 59
Query: 79 SVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT 138
+ ++ + ++I + +I+SA ++++D N L + E ++P+ PVS
Sbjct: 60 DM-ALYDSIDSEFIEKRWGYIASAEIVLLDTNFPAEVLKKTISRCYEESVPLCITPVSSP 118
Query: 139 KSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLL 198
K +++ + +T + N DE A LSG + +S F+ + ++
Sbjct: 119 KVKKLPENLMGVTWLIANHDE----AETLSGMKI--------NSDGDFFKAAEK----IM 162
Query: 199 EKGIRLVVLTLGSDGVLLCSKE 220
+KG+ VV+T G G++ +KE
Sbjct: 163 KKGVEKVVITRGDKGLIFYTKE 184
>gi|146294266|ref|YP_001184690.1| ribokinase [Shewanella putrefaciens CN-32]
gi|145565956|gb|ABP76891.1| ribokinase [Shewanella putrefaciens CN-32]
Length = 303
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 6 GGVARNVAECMSKLGSKPY----MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
GG N A ++L +KP I LG D G+ +L+ W G+S EGI + ++ T
Sbjct: 38 GGKGANQAVACARL-AKPDTHIDFICHLGKDSVGDDMLQSWLKDGISAEGITQTSNMSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE VA+ + E L P+ + + ++A L++ +A + +
Sbjct: 97 TAMIFIGDNGENTIGVAAGANAE--LLPEDLENYYALFANAQYLLIQLETPLTTVAKALQ 154
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + P + ++++ +++PNE E A AL+G + D H
Sbjct: 155 MAKRLGVTTVLNPAPAKVLG--PNYLQWVDIITPNETE----AAALTGVEINHLDD--AH 206
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
A L L ++G+ +VV+TLG+ G + S
Sbjct: 207 LATQL----------LHQQGVGIVVITLGAKGAYISSPHF 236
>gi|224477901|ref|YP_002635507.1| ribokinase [Staphylococcus carnosus subsp. carnosus TM300]
gi|222422508|emb|CAL29322.1| ribokinase [Staphylococcus carnosus subsp. carnosus TM300]
Length = 304
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++G++ IS +G D + + + +K AG++ + I + DT
Sbjct: 40 GGKGANQAIATARMGAETTFISKVGKDGLADFMFDDFKEAGMNIDYILESETEDTG--QA 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ E + + +TP+ + + I A + + PA+ + KIA E
Sbjct: 98 FITVDAEGSNTIYVYGGANMAITPEDVDKAASKIKEADYIAAQLEVPVPAIIQAFKIARE 157
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P K ++ I V+ PNE E A LSG P+ K A++
Sbjct: 158 AGVTTVLNPAPAEKLPE--ELLSLIDVIVPNEFE----AEILSG----IPVTDEKSMAQN 207
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDG 213
L+ GI++VV+TLG G
Sbjct: 208 A--------DYFLDLGIKVVVITLGEQG 227
>gi|156400094|ref|XP_001638835.1| predicted protein [Nematostella vectensis]
gi|156225959|gb|EDO46772.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 63/286 (22%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N S+LG+K M++ +G D G+ +E++K ++ + + K T V
Sbjct: 43 FGGKGANQCVMASRLGAKSAMVAKVGDDSFGHSTIENFKQNKVNVDHVTLTKKAFTGVAP 102
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ VN ++ V ++L D I++ I SASV++ + P + +A
Sbjct: 103 --ISVNNGGENSITIVSGANEYLDEDDIKRARSMIVSASVVVCQLEIQPDITQLALALAR 160
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N+ F P + + T + V NE E A L+G P+ ++ AE
Sbjct: 161 NANVTTVFNPAPAS-AWLDTQFYRLSDVFCANESE----AELLTG----LPV-KSIDDAE 210
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
A+++LLE+G V++TLG+ G ++ S++ P
Sbjct: 211 K-------AVVMLLERGAGRVIITLGAKGSVIGSQQ------------NP---------- 241
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVG 290
+H P P+ V TGAGD +G
Sbjct: 242 ----------------------MPLHIPVTPSEAVDTTGAGDAFIG 265
>gi|120597595|ref|YP_962169.1| ribokinase [Shewanella sp. W3-18-1]
gi|120557688|gb|ABM23615.1| ribokinase [Shewanella sp. W3-18-1]
Length = 303
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 6 GGVARNVAECMSKLGSKPY----MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
GG N A ++L +KP I LG D G+ +L+ W G+S EGI + ++ T
Sbjct: 38 GGKGANQAVACARL-AKPDTHIDFICRLGKDSVGDDMLQSWLKDGISAEGITQTSNMSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE VA+ + E L P+ + + ++A L++ +A + +
Sbjct: 97 TAMIFIGDNGENTIGVAAGANAE--LLPEDLENYYALFANAQYLLIQLETPLTTVAKALQ 154
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + P + ++++ +++PNE E A AL+G + D H
Sbjct: 155 MAKRLGVTTVLNPAPAKVLG--PNYLQWVDIITPNETE----AAALTGVEINHLDD--AH 206
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
A L L ++G+ +VV+TLG+ G + S
Sbjct: 207 LATQL----------LHQQGVGIVVITLGAKGAYISSPHF 236
>gi|306845363|ref|ZP_07477938.1| ribokinase [Brucella inopinata BO1]
gi|306274279|gb|EFM56091.1| ribokinase [Brucella inopinata BO1]
Length = 313
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDLV--SAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|154503940|ref|ZP_02041000.1| hypothetical protein RUMGNA_01766 [Ruminococcus gnavus ATCC 29149]
gi|336434043|ref|ZP_08613848.1| ribokinase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153795367|gb|EDN77787.1| ribokinase [Ruminococcus gnavus ATCC 29149]
gi|336014630|gb|EGN44470.1| ribokinase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 300
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++Y+ GG N A M+KLG+K M +G D G LLE++K G+ T I+ + + T
Sbjct: 32 LHYIPGGKGANQAVAMAKLGAKVEMFGCVGDDANGTRLLENFKKVGVETGHIKVLEGVPT 91
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ + GE + V + D+I + + + ++++ + +
Sbjct: 92 GIAMITV---GENDNTIIVVPGANGKVDRDYIDRIKEELKTFDMVVLQQEIPLDTVYYVV 148
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+ IPV P S V++ +T V+PNE E V + GE +
Sbjct: 149 DFCYDNQIPVVLNPAPA--SNVPLEVIEKVTYVTPNEHEAV----LIFGE---------E 193
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK--ELLS 223
+S E L + EK +++T GS GV+ C K E+LS
Sbjct: 194 YSTEDLLREYP-------EK----LIITQGSRGVITCLKNGEILS 227
>gi|448396880|ref|ZP_21569328.1| PfkB domain protein [Haloterrigena limicola JCM 13563]
gi|445673409|gb|ELZ25970.1| PfkB domain protein [Haloterrigena limicola JCM 13563]
Length = 286
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A NVA +S+LG + +I ++G D G + ++AG+S G+R +D DTAV
Sbjct: 33 GGSAANVAAALSELGIETELIGSVGDDDHGLLARRELEAAGVSVSGVRVIEDADTAVKYL 92
Query: 66 ILDVNGELAAAVASVESIEKFLTPD-----WIRQFIH-HISSASVLMVDANLSPPALAAS 119
++D +GE+ A+ + + + +TPD IR H H++ P AA
Sbjct: 93 LVDDDGEV--AILGNDGVNEAVTPDDLEPSRIRAADHVHLTGQ---------RPDTAAAI 141
Query: 120 CKIAAECNIPVWFEP 134
+ A+E V F+P
Sbjct: 142 ARTASEAGGSVSFDP 156
>gi|317471734|ref|ZP_07931075.1| ribokinase [Anaerostipes sp. 3_2_56FAA]
gi|316900838|gb|EFV22811.1| ribokinase [Anaerostipes sp. 3_2_56FAA]
Length = 639
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 70/303 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N + +KLG + +I +G D+ + K G+ + G++R T
Sbjct: 363 GGKGINQSIGAAKLGHRVTLIGNVGSDIDSASVYNALKEYGVESFGVKRCNQEKTGQAFI 422
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ +G + ++ + LTP+ IR+ + ++ + + +A +C+IA E
Sbjct: 423 FVESSGH--SMISILSGANNILTPEDIRKRKRFFKNTGYCLIQSEIPLDTVAEACRIAHE 480
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
C +P SV + V+ + ++ PNE+EL + A S
Sbjct: 481 CGAKTILKP-SVC-GFIPSEVLSGVDILVPNEEELNEICPAQS----------------- 521
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
TL+ LLE GI +++TLG +G Y + DL K
Sbjct: 522 ---TLQEKTGALLEYGIETIIVTLGENGC--------------------YVRTADLEK-- 556
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQS 305
HFPA+P V TGA D + A + G + ++
Sbjct: 557 ------------------------HFPAVPFPSVDNTGASDAFISALAAYLLYGYSLEEA 592
Query: 306 VAV 308
V +
Sbjct: 593 VRI 595
>gi|334125263|ref|ZP_08499253.1| ribokinase [Enterobacter hormaechei ATCC 49162]
gi|333387237|gb|EGK58439.1| ribokinase [Enterobacter hormaechei ATCC 49162]
Length = 412
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 113/301 (37%), Gaps = 67/301 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV-VS 64
GG N A +SK K + + +G D + EH S+ + + + + KD T +
Sbjct: 135 GGKGANQALAVSKCNVKTHFVGKVGNDQFSQMAFEHLSSSAIDSFTLYQDKDQKTGTALI 194
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+ +GE A++ + +T D + + ++ + + + PA + +IA
Sbjct: 195 YVCQSDGENMIAISP--GANRSITADEVEAITPEVKNSDIFLTQLENNLPATFRAIEIAR 252
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I V P S + S +K + ++PNE E A+ LSG ++
Sbjct: 253 RNGIKVVLNPAPW--SSDVVSCLKNVDFLTPNETE----ASLLSGIHIMD---------- 296
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+ K A + G+ V++T+G+ G L+
Sbjct: 297 --LASAKDAARAIKAMGVGHVIITMGAKGALIYD-------------------------- 328
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
G QF +H PAL A V TGAGD G A+++ G ++Q
Sbjct: 329 ------------------GEQF--IHIPALKAVCVDTTGAGDAFNGAFAAAMAKGESIIQ 368
Query: 305 S 305
+
Sbjct: 369 A 369
>gi|260757172|ref|ZP_05869520.1| ribokinase [Brucella abortus bv. 6 str. 870]
gi|260677280|gb|EEX64101.1| ribokinase [Brucella abortus bv. 6 str. 870]
Length = 313
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYGADIAKARITLLQREVPHEANLAVAKSVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLITAD 240
>gi|336310121|ref|ZP_08565093.1| ribokinase in cluster with nucleoside hydrolase [Shewanella sp.
HN-41]
gi|335865851|gb|EGM70842.1| ribokinase in cluster with nucleoside hydrolase [Shewanella sp.
HN-41]
Length = 332
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 6 GGVARNVAECMSKLGSKPY----MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
GG N A ++L S P+ I LG D GN + W G+ +GI + +++T
Sbjct: 56 GGKGANQAVACARL-SHPHSQIDFICHLGQDSVGNEMCASWLKDGIRIDGISQIANMNTG 114
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE + +A+ LTP + + ++A +++ ++ + +
Sbjct: 115 TAMIFVADNGENSIGIAA--GANANLTPIELDKHYALFANAQFMLIQLETPMETVSHALQ 172
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
A I P V S +K++ +++PNE E A AL+G I+ N
Sbjct: 173 TAKRLGITTVLNPAPVVSSE--LDYLKWVDIITPNETE----AEALTG------IEVNNE 220
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
+ K A +L ++G+ VV+TLGS G + S
Sbjct: 221 ------EDAKLAAQLLHQQGVTTVVITLGSKGAFISS 251
>gi|449283260|gb|EMC89941.1| Ribokinase, partial [Columba livia]
Length = 309
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 35/271 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K +I +G D GN +E+ K G+ST + + D T S
Sbjct: 38 FGGKGANQCVQSARLGAKTSLICKVGKDSFGNDYVENLKKNGISTAFVGQTTDAATGTAS 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ I +A V++ ++P + K+A
Sbjct: 98 II--VNSEGQNVIVIVPGANLLLNSEDLKRASDVICNAKVVVCQLEITPAVSLEALKMAH 155
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P Y + NE E A L+G P+ N AE
Sbjct: 156 ASGVKTLFNPAPALADLD-PQFYTYSDIFCCNETE----AEILTG----IPVG-NLEDAE 205
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+ + +LL++G +LV++TLG++G ++ S E + K P G R
Sbjct: 206 KVGR-------MLLQRGCKLVIVTLGAEGCMMISVEE------PIPKHVPAGKVR----A 248
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
V + + GA+ F+ ++P LP
Sbjct: 249 VDTTGAGDSFMGAL------AFYLAYYPKLP 273
>gi|332297046|ref|YP_004438968.1| PfkB domain-containing protein [Treponema brennaborense DSM 12168]
gi|332180149|gb|AEE15837.1| PfkB domain protein [Treponema brennaborense DSM 12168]
Length = 328
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 23/228 (10%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
++ V GGVAR +A +++LG ++S +G D+ G+ L + + G+ T +R T
Sbjct: 34 IDLVPGGVARGMAMNLNRLGLPSAVLSVVGNDIFGDYLKKGLIAEGVDTTLLRTSDTRKT 93
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAA-- 118
++ S ++ G+ A+ + + + + D +R+++ + VL +D+N+S LA+
Sbjct: 94 SLFS-VMASYGKPASCIYCNDVLSEITVDDEVRRYVAE-RNVDVLCIDSNVSETTLASLY 151
Query: 119 ----SCKIAAE---CNIPVWFEPVSVTK-SRRITSVVKYITVVSPNEDELVAMANALSGE 170
+CK AA C P F+ + + + I + + NE E A+ N
Sbjct: 152 GLKTACKPAAANGLCKPPFIFQNATAPDIAHKSLPYAALIDLFACNEFEAAAILNYAGIS 211
Query: 171 NMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
F P+ +E+ F++L G R ++T G GVL+ S
Sbjct: 212 LPFEPLLPGTELSEA-FRSL----------GFRDFIVTFGERGVLVHS 248
>gi|384446175|ref|YP_005660393.1| ribokinase [Brucella melitensis NI]
gi|349744172|gb|AEQ09714.1| ribokinase [Brucella melitensis NI]
Length = 306
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 42 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 101
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + I + I+ A + ++ + A A K V
Sbjct: 102 GQNTIAVCA--GANARCSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 159
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 160 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 209
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 210 ------LLERGPKIVILKLGSRGALLVTAD 233
>gi|256079057|ref|XP_002575807.1| ribokinase [Schistosoma mansoni]
gi|353230862|emb|CCD77279.1| putative ribokinase [Schistosoma mansoni]
Length = 365
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 48/306 (15%)
Query: 2 NYVLGGVARNVAECMSK--LGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
N++LG + +C++ LG ++ +G D G + ++H K G+ST+GI R
Sbjct: 34 NFLLGYGGKGANQCVASRVLGCNTALVGKVGDDYFGEMFIQHLKQLGVSTDGISRSSMNS 93
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHIS--SASVLMVDANLSPPALA 117
T V S ++ G + V ++ I F ++ V++ ++P A
Sbjct: 94 TGVASITVET-GTGGNQIIIVPGANMLVSEKDI-SFAEKLTLLDTKVIVCQFEINPSATL 151
Query: 118 ASCKIAAECNIPVWFEPVS----------VTKSRRITSVVKYITVVSPNEDELVAMANAL 167
S ++ P + + ++ V PNE E ++ +
Sbjct: 152 YSLRLGRAKGAKTILNPAPAPVASGNPEILGNYELMEDILPNCDFVCPNESEFCSITESD 211
Query: 168 SGENMFRPIDRNKHSAESL-FQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
SG ++F +K+ SL P + LLEK I+ ++TLGS GV+ +LS
Sbjct: 212 SG-SLF-----SKNEIGSLNIDAFIPGLAYLLEKKIKCPIVTLGSKGVI----AILSEQD 261
Query: 227 IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS--VVRLTGA 284
+ ++Y S + + VHF A P++ VV TGA
Sbjct: 262 MA-----------NIYAKDASEVARITFE-------NQEKLVVHFSA-PSNFDVVDTTGA 302
Query: 285 GDCLVG 290
GDC VG
Sbjct: 303 GDCFVG 308
>gi|213513322|ref|NP_001134323.1| Ribokinase [Salmo salar]
gi|209732374|gb|ACI67056.1| Ribokinase [Salmo salar]
Length = 314
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 61/286 (21%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N +++G+K M+ +G D G ++++K G+STE + + D T S
Sbjct: 41 FGGKGANQCIQAARMGAKTAMVCKVGKDFFGENYIQNFKDNGVSTEFVGQTVDSATGAAS 100
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ GE A+ V L + +R+ + +S A V++ +SP + +++
Sbjct: 101 IIVNDAGE--NAIVIVAGANLLLGGEDLRRALPALSRAKVMVCQLEVSPDTSLQALRLSH 158
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E N+ F P + V NE E A L+G + D + E
Sbjct: 159 ENNVKTIFNPAPAIPVLD-PEFYRASDVFCCNESE----AELLTGVAVASIEDAGRAGQE 213
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
LL +G V++TLGS G ++ S
Sbjct: 214 ------------LLRRGCSSVIITLGSRGCVVLS-------------------------- 235
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVG 290
A EP+ S H P P + V TGAGD +G
Sbjct: 236 ------------AQEPSSPSH----HVPTKPVTTVDTTGAGDSFIG 265
>gi|319650496|ref|ZP_08004636.1| ribokinase [Bacillus sp. 2_A_57_CT2]
gi|317397677|gb|EFV78375.1| ribokinase [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 116/297 (39%), Gaps = 75/297 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KLG++ MI +G D+ GN L H ++ G+ST+ ++ T + S
Sbjct: 36 GGKGANQAVAAAKLGAEVQMIGRVGDDLFGNEYLTHLRNLGISTDSVKPVTHGKTGIAS- 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I G+ V +++ LTP+ + ++ I + L++ + ++ + +IA +
Sbjct: 95 ITVYEGDNKIIVVPGANLQ--LTPNVVEEYKEEIVKSDWLLLQFEIPLESVEKALEIAHQ 152
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ V P + + + IT ++PNE E E +F S
Sbjct: 153 GGVKVILNPAPFEQIPK--HWFEMITYLTPNEYE---------AEELF-----------S 190
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L++ + + L++K +V+T G+ GVLL
Sbjct: 191 LYKNDQDVLNSLIDK----LVITKGAQGVLL----------------------------- 217
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDV 302
Y G E V PAL V TGAGD G ++S G D+
Sbjct: 218 --------YDGKKE---------VTIPALKVETVDTTGAGDTFNGALAVALSEGNDL 257
>gi|358064686|ref|ZP_09151248.1| ribokinase [Clostridium hathewayi WAL-18680]
gi|356697021|gb|EHI58618.1| ribokinase [Clostridium hathewayi WAL-18680]
Length = 310
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 117/315 (37%), Gaps = 70/315 (22%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A KLG M+ +G D G +L + +G+ + +R+ T
Sbjct: 37 VPGGKGANQACAAGKLGGDAVMLGCIGRDSFGGVLQKSLADSGVDSSRLRQTGSC-TGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
S +D NG+ + V V +++++ S +++ + P A+ + +
Sbjct: 96 SIYVDGNGDNSIVV--VPGANHDCGVEYLKEMDDAFQECSYILLQMEIPPEAVYYAVRRG 153
Query: 124 AECNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
E V P + R I V Y+T PNE EL ++ L G ++
Sbjct: 154 RELGKTVILNPAPAPEEIPREILEKVDYLT---PNETELAKLS-GLEGTDV--------- 200
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
++++ L+E G R V++T+G G L G KTK
Sbjct: 201 ------KSIEAGARRLIEMGARHVIVTMGDQGCFLA----------GDGKTK-------- 236
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
FPA V T AGDC G + +++ G++
Sbjct: 237 ----------------------------VFPARKVESVDTTAAGDCFNGAFVTALAEGMN 268
Query: 302 VMQSVAVDDAKTVYA 316
V +S+ + +A + A
Sbjct: 269 VEESIRLANAASSIA 283
>gi|374296169|ref|YP_005046360.1| sugar kinase [Clostridium clariflavum DSM 19732]
gi|359825663|gb|AEV68436.1| sugar kinase, ribokinase [Clostridium clariflavum DSM 19732]
Length = 322
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N+A C+SKLG K I +G DM G+ L E G+ T G++ ++ +T +
Sbjct: 32 GGAPANLAACISKLGGKTAFIGKVGKDMFGSFLSEVLIKHGVDTAGLKFSEEHNTTLAFV 91
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI------RQFIHHISSASVLMVDANLSPPALAAS 119
D GE + LTP I I H S S M D PA +A+
Sbjct: 92 KCDKRGERTFTFYRNPGADTCLTPAEIDFKLIDSSRIFHFGSLS--MTD----EPARSAT 145
Query: 120 CK---IAAECNIPVWFEP---VSVTKS-----RRITSVVKYITVVSPNEDEL---VAMAN 165
K A N+ + ++P +++ KS R ITSV+ + ++ +E+EL M +
Sbjct: 146 LKALEYAKSKNLIISYDPNLRMALWKSSDQALREITSVLSMVDILKVSEEELEFITGMGD 205
Query: 166 ALSGENM 172
G N+
Sbjct: 206 NEKGSNL 212
>gi|170050783|ref|XP_001861466.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872268|gb|EDS35651.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 186
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGN----ILLEHWKSAGLSTEGIRRQK 56
VN GGV RN+AE + K+ ++SA+G D G+ +L +H ++ L+T
Sbjct: 55 VNIAGGGVGRNIAEGIWKIYGDVRLVSAVGTDQNGDLIKRLLPDHCRTPVLTT------A 108
Query: 57 DIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
D TA S +LD G+ V + S+ ++ DWI I A ++++DAN+SP +
Sbjct: 109 DYPTANCSILLDNRGDCKLCVGDM-SVHGAISVDWINSHRDLIRDAPLVVLDANVSPATM 167
Query: 117 AA 118
A
Sbjct: 168 EA 169
>gi|333899933|ref|YP_004473806.1| ribokinase [Pseudomonas fulva 12-X]
gi|333115198|gb|AEF21712.1| ribokinase [Pseudomonas fulva 12-X]
Length = 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ MI +G D G L + G+ + + T + S
Sbjct: 39 GGKGANQAVAAARLGAQVAMIGCVGADAYGARLRTGLITEGIDCSAVSEIDGVPTGIASI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D G+ A+ V LTP + ++ A VL+V + + A+ + E
Sbjct: 99 LVDDAGQ--NAIVIVAGGNGALTPQHLSAQAQLLADAQVLIVQLEVPDATVEAAMMLGRE 156
Query: 126 CNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
V P V S + Y+ PNE E A AL+G + P
Sbjct: 157 AGCTVILNPAPVAGPLSAHWYGMADYLI---PNESE----AAALTGLPVGSP-------- 201
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
Q+ PA LL+ G R V++TLG+ GVL E
Sbjct: 202 ----QSALPAARSLLQAGARRVLITLGAQGVLYADAE 234
>gi|117921914|ref|YP_871106.1| ribokinase [Shewanella sp. ANA-3]
gi|117614246|gb|ABK49700.1| ribokinase [Shewanella sp. ANA-3]
Length = 303
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 6 GGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
GG N A ++L ++ I LG D GN + W G+ EGI + ++ T
Sbjct: 38 GGKGANQAVACARLCQGDAEVAFICHLGQDSVGNDMRTSWLKDGIKAEGITQVANMSTGT 97
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ NGE + +A+ + + LTP + + ++A L++ + + +
Sbjct: 98 ALIFVGDNGENSIGIAAGANAD--LTPSELEKHYALFANAQFLLIQLETPMETVHHALQT 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A I P T +K++ +++PNE E A AL+G + N+
Sbjct: 156 AKRLGITTVLNPAPATSQE--LDYLKWVDIITPNETE----AEALTGIEV-----NNEED 204
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
AE Q L ++G+ VV+TLGS G + S
Sbjct: 205 AELAAQWLH-------QQGVATVVITLGSKGAFISS 233
>gi|225685875|ref|YP_002733847.1| ribokinase [Brucella melitensis ATCC 23457]
gi|256261913|ref|ZP_05464445.1| ribokinase [Brucella melitensis bv. 2 str. 63/9]
gi|384212543|ref|YP_005601626.1| ribokinase [Brucella melitensis M5-90]
gi|384409643|ref|YP_005598263.1| ribokinase [Brucella melitensis M28]
gi|225641980|gb|ACO01893.1| ribokinase [Brucella melitensis ATCC 23457]
gi|263091393|gb|EEZ15929.1| ribokinase [Brucella melitensis bv. 2 str. 63/9]
gi|326410190|gb|ADZ67254.1| ribokinase [Brucella melitensis M28]
gi|326553483|gb|ADZ88122.1| ribokinase [Brucella melitensis M5-90]
Length = 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L+ + GL T +R D+DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALKQMREFGLDTGSVRVIDDVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCA--GANARCSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTDL--ASAEAAGRK- 216
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G ++V+L LGS G LL + +
Sbjct: 217 ------LLERGPKIVILKLGSRGALLVTAD 240
>gi|157109112|ref|XP_001650528.1| hypothetical protein AaeL_AAEL005219 [Aedes aegypti]
gi|108879102|gb|EAT43327.1| AAEL005219-PA [Aedes aegypti]
Length = 249
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNI---LLEHWKSAGLSTEGIRRQKD 57
VN GGV RN+AE + K+ +I+A+G D G+ LL + A + T G D
Sbjct: 15 VNTSCGGVGRNIAEGIWKIFGNVNLITAVGNDQNGDYVKRLLPNHCGASILTAG-----D 69
Query: 58 IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
+ TA S +LD G+ V + S+ +T +WI I A ++++DAN+S A+
Sbjct: 70 LPTANCSILLDNRGDCKLVVGDM-SVHNAITAEWINSHEKLIREAPLVIMDANISVEAMK 128
Query: 118 ASCKIAAECNIPV 130
A+ ++ + + PV
Sbjct: 129 ATFELCLQYDKPV 141
>gi|415706032|ref|ZP_11461171.1| ribokinase family sugar kinase [Gardnerella vaginalis 0288E]
gi|388055457|gb|EIK78370.1| ribokinase family sugar kinase [Gardnerella vaginalis 0288E]
Length = 303
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S++GSK M++ +G D+ + +++ G+ + + R T+ V+
Sbjct: 37 GGKGANQAVAASRMGSKVLMVTRVGNDVFAENTINNFEKNGIDAKFVMRTD--ATSGVAP 94
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I V+ + ++ V+ L P+ + + IS ++++ + + A+ ++ AE
Sbjct: 95 IF-VDPQSRNSIIIVKGANAKLKPNDVEKARSEISKCKLIVLQLEIPLETVYATIRMGAE 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV P + + + ++ + PNE EL + L+G P+D +
Sbjct: 154 LGVPVLLNPAPADPALSLEN-IRNCEFIVPNESEL----SLLTG----MPVDTS------ 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + A +LL+ GI V++TLGS G LL + E
Sbjct: 199 --EDITNAARMLLQSGIPNVIVTLGSKGALLVNSE 231
>gi|225350790|ref|ZP_03741813.1| hypothetical protein BIFPSEUDO_02360 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158246|gb|EEG71488.1| hypothetical protein BIFPSEUDO_02360 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG+ N+A +++LG Y+IS G D G + + + G+ ++ + T+
Sbjct: 94 VGGIGYNIAYNLNRLGVPNYLISVYGDDENGERVKQDAYANGIDITHAKQISHMPTSTFL 153
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+++ G + ++ I +TP+++ Q I +A ++ +D++L A+A C+ +
Sbjct: 154 SVVSAQGRQIVGLDDMQ-ISAEITPEFLAQREQTIVNAEMVAIDSSLPSDAIAWVCEKTS 212
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
P++ VSV K+ RIT V+ I + N E A +SG + ++ SA
Sbjct: 213 R---PIFVRVVSVNKAARITPVLDRIDTMVLNSAE----AKFVSGIEV-----HDEASAR 260
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ LL G+R V L + +L C +
Sbjct: 261 DCAEH-------LLRSGVRNVFLFVDDSDMLYCCE 288
>gi|422016912|ref|ZP_16363488.1| putative carbohydrate kinase [Providencia burhodogranariea DSM
19968]
gi|414091342|gb|EKT53028.1| putative carbohydrate kinase [Providencia burhodogranariea DSM
19968]
Length = 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S ++T + + + V
Sbjct: 37 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYSINTRYVEKVPCTSSGVAP- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN A ++ V+ KFL+P+ I + + ++++ + + + +
Sbjct: 96 -IFVNPNSANSILIVKGANKFLSPEDIERAAEDLKKCKLIVLQLEVQLETVYHAIAFGNK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P ++ + + VV PNE EL + N P+D
Sbjct: 155 HNIPVLLNPAPAQRTLDLDFACRCDFVV-PNETELEILTN--------MPVDT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LL+KG++ +++TLG G L +++
Sbjct: 199 -MDNIRRASQSLLDKGLKNLIVTLGEKGALWMTRD 232
>gi|422020557|ref|ZP_16367095.1| putative carbohydrate kinase [Providencia alcalifaciens Dmel2]
gi|414101194|gb|EKT62795.1| putative carbohydrate kinase [Providencia alcalifaciens Dmel2]
Length = 306
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 37 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + ++ V+ KFL+P+ I + + ++++ + + + +
Sbjct: 96 -IFVNQNSSNSILIVKGANKFLSPEDIDRAAEDLKKCKLIVLQLEVQLETVYHAIAFGNK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P ++ + + V PNE EL + N P+D
Sbjct: 155 HNIPVLLNPAPAQRALDLDYACRCDFFV-PNETELEILTNM--------PVDT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LL+KG++ +++TLG G L +++
Sbjct: 199 -MDNVRRAAQSLLDKGLKNLIVTLGDKGALWMTRD 232
>gi|212710282|ref|ZP_03318410.1| hypothetical protein PROVALCAL_01341 [Providencia alcalifaciens DSM
30120]
gi|212687089|gb|EEB46617.1| hypothetical protein PROVALCAL_01341 [Providencia alcalifaciens DSM
30120]
Length = 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 60 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 118
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + ++ V+ KFL+P+ I + + ++++ + + + +
Sbjct: 119 -IFVNQNSSNSILIVKGANKFLSPEDIDRAAEDLKKCKLIVLQLEVQLETVYHAIAFGNK 177
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
NIPV P ++ + + V PNE EL + N P+D
Sbjct: 178 HNIPVLLNPAPAQRALDLDYACRCDFFV-PNETELEILTNM--------PVDT------- 221
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LL+KG++ +++TLG G L +++
Sbjct: 222 -MDNVRRAAQSLLDKGLKNLIVTLGDKGALWMTRD 255
>gi|288869897|ref|ZP_06112206.2| ribokinase [Clostridium hathewayi DSM 13479]
gi|288869186|gb|EFD01485.1| ribokinase [Clostridium hathewayi DSM 13479]
Length = 314
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
+YV GG N A +++G+ + LG D G +LL + K+ ++T I + + T
Sbjct: 37 SYVPGGKGANQAAAAARMGADTTLAGCLGCDDNGELLLNNLKAFHINTNHILKAPESQTG 96
Query: 62 VVSNILD-VNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++D +G + +V +TP + ++ ++++ + + +C
Sbjct: 97 LALMLVDSASGRYVS--YNVMGGNNLITPGQVEDALNDCHY-DMILIQLEMPLETVYRTC 153
Query: 121 KIAAECNIPVWFE---PVSVTKSRRITSVVKYITVVSPNEDELVAMANAL--SGENMFRP 175
++AAE IPV+ + +S+ SR + I ++SPNE E A+ S EN+ R
Sbjct: 154 EMAAERRIPVFLDAGPAMSIPLSR-----LSGIFIISPNESETKALTGITVDSNENIRR- 207
Query: 176 IDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSD 212
+AE L+Q + P+ VLL+ G R G+D
Sbjct: 208 ------AAEMLYQRVHPS-YVLLKLGERGAFCYDGTD 237
>gi|134279139|ref|ZP_01765852.1| ribokinase [Burkholderia pseudomallei 305]
gi|134249558|gb|EBA49639.1| ribokinase [Burkholderia pseudomallei 305]
Length = 310
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ + + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIDIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A+S
Sbjct: 156 RGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAADS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|354603938|ref|ZP_09021931.1| ribokinase [Alistipes indistinctus YIT 12060]
gi|353348370|gb|EHB92642.1| ribokinase [Alistipes indistinctus YIT 12060]
Length = 309
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG+ MI+ +G D G + G+ T GI + + +
Sbjct: 42 GGKGANQAVAAARLGASVRMIAKVGKDAFGEESVASLAREGVDTAGILTDAEHPSGIAMI 101
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D GE +VAS ++ LTP+ + I SA ++++ + P + ++A +
Sbjct: 102 LVDDRGENMISVASGANLA--LTPEELGAVEEIIRSAGIVLMQLEIPMPVIEYVARMAKQ 159
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
V P K + ++ ++ ++ PN+ E A +SG +A +
Sbjct: 160 HGATVILNPAPAPKQQLPPELLAHVDILIPNQTE----AELISG------------TAVN 203
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
+++ A + + G+R V++T+G+ GV + E +S I ++ K
Sbjct: 204 DYESAAAAAGKIGQMGVRTVIITMGAHGVFVYDSESGNSEIIVAKRVK 251
>gi|315283393|ref|ZP_07871599.1| carbohydrate kinase [Listeria marthii FSL S4-120]
gi|313612965|gb|EFR86901.1| carbohydrate kinase [Listeria marthii FSL S4-120]
Length = 399
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D + ++ + ++ + + I T +
Sbjct: 127 GGVARNVGENLGRLGKEVILLTACGTDSDWEAV-KNASNTYMNLDYVTAFPSIATGSYTA 185
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 186 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 244
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 245 NSIPLVLVPVSSPKMSHLPESLDHVTWLICNRDE--------SETHLGMTIEND------ 290
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A L+ G++ V++T GS G + +K
Sbjct: 291 --EDWRLATQKWLDLGVKNVIVTNGSKGAVAANK 322
>gi|407771615|ref|ZP_11118969.1| Ribokinase, bacterial [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407285409|gb|EKF10911.1| Ribokinase, bacterial [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 307
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 18/210 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++LG P IS +G D+ G L++ + G T + + D T
Sbjct: 37 GGKGCNQAIAVARLGQMPVFISKIGNDVLGRSLIDTLNAEGFDTNQLIQSADAQTGTALI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D GE VA ++ ++ IR+ + + L+V A+A + K A E
Sbjct: 97 SIDDAGENIITVAGGANMT--MSRADIREKQVFLEHCNYLLVQLECPVVAIACAMKYARE 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ +P V + +++ +V+PN +E AM + +N D H+A S
Sbjct: 155 AGATIILDPAPVPDRVVLRDLMELTDIVTPNINECSAM-TGIHPDN-----DETAHAAAS 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
L E G R+VV+ +GS G
Sbjct: 209 K----------LHEMGARIVVIKMGSRGAF 228
>gi|255018299|ref|ZP_05290425.1| carbohydrate kinase, PfkB family protein [Listeria monocytogenes
FSL F2-515]
Length = 281
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 9 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 67
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 68 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 126
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 127 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLDMTIEND------ 172
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A L+ G++ V++T GS G + +K
Sbjct: 173 --EDWRLAAQKWLDLGVKNVIVTNGSKGAVAANK 204
>gi|295673266|ref|XP_002797179.1| IdgA domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282551|gb|EEH38117.1| IdgA domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 789
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 138/349 (39%), Gaps = 73/349 (20%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLE--HWKSAGLSTEGIR---RQ 55
++ LGGV NVA S +GS S + D++G L A + ++GI+
Sbjct: 414 ISQSLGGVGHNVALAASYVGSPVLFCSIVADDLSGRAALAAIEKSRANILSQGIQVLSST 473
Query: 56 KDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQF-------IHHISSASVLMVD 108
+ TA +I D +L A+A + +E TP+ F + H V+ +D
Sbjct: 474 SGVRTAQYVSINDAKRDLMLAMADMSIME---TPEKSLNFGSFWDPLVQHARPKWVV-ID 529
Query: 109 ANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITS--------VVKY--------ITV 152
AN S L+ +A FEPVS TKS R+ + V++ I +
Sbjct: 530 ANWSSDVLSKWISLAKSHGAKTAFEPVSTTKSTRLFTKSQSTSKPVIQLSSTIPNHTIDL 589
Query: 153 VSPNEDELVAMANALSGENMFRPID---------------RNKHSA---ESLFQTLKPAI 194
+PN EL AM A +F + R++ A L P
Sbjct: 590 ATPNRYELAAMYTAARDTGLFESAEWWRVINALEMPSSGSRDRLIALTNSELVNEGIPQQ 649
Query: 195 LVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRY 254
+ L I ++ LG GVLL +LLS LR S D + + R Y
Sbjct: 650 SIQLLPFIPCIISKLGPQGVLLT--QLLSRGDERLR-------SADFARYILGRA----Y 696
Query: 255 SGAMEPAGGSQFFAVHFPALPASVVRLT------GAGDCLVGGTLASIS 297
+ P GG + FP PA V+R T GAGD L+G +A ++
Sbjct: 697 ADDTNPVGG--VYMRLFP--PAEVLRDTDVVSVNGAGDTLLGVIVAGLA 741
>gi|11545855|ref|NP_071411.1| ribokinase [Homo sapiens]
gi|20139730|sp|Q9H477.1|RBSK_HUMAN RecName: Full=Ribokinase
gi|10799803|emb|CAC12877.1| ribokinase [Homo sapiens]
gi|16924287|gb|AAH17425.1| Ribokinase [Homo sapiens]
gi|119620955|gb|EAX00550.1| ribokinase, isoform CRA_a [Homo sapiens]
Length = 322
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|282915633|ref|ZP_06323404.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus D139]
gi|282320449|gb|EFB50788.1| PfkB family carbohydrate kinase [Staphylococcus aureus subsp.
aureus D139]
Length = 372
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+A + +LG +SA G D +++ + ++ + +++ ++ T +
Sbjct: 92 IGGVARNIAGNLGRLGETVAFLSASGQDSEWE-MIKRLSTPFMNLDHVQQFENASTGSYT 150
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ G++ +A +E + ++TP+++ + H + A ++VD NL AL C
Sbjct: 151 ALISKEGDMTYGLADMEVFD-YITPEFLIKRSHLLKKAKCIIVDLNLGKEALNFLCAYTT 209
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN 165
+ I + VS K + + + I + N+DE N
Sbjct: 210 KHQIKLVITTVSSPKMKNMPDSLHAIDWIITNKDETETYLN 250
>gi|90109689|pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase
gi|90109690|pdb|2FV7|B Chain B, Crystal Structure Of Human Ribokinase
Length = 331
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 60 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 119
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 120 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 177
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 178 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 228
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 229 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 269
>gi|398831800|ref|ZP_10589976.1| sugar kinase, ribokinase [Phyllobacterium sp. YR531]
gi|398211502|gb|EJM98120.1| sugar kinase, ribokinase [Phyllobacterium sp. YR531]
Length = 332
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 67/301 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N +++ G + ++S G D AG+++ ++AG+ + D T +
Sbjct: 58 GGGVFNTLRLVTQRGIQAEILSVRGADSAGDMVASAIEAAGIKDSSVVFM-DRPTPSYTA 116
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHH-ISSASVLMVDANLSPPALAASCKIAA 124
ILD G++ AA+A + E L R+ + I+SAS + DANL P L +A
Sbjct: 117 ILDERGDVVAAIADMALYELALPKQLRRRKVRDAIASASAIFCDANLPPEGLKRVADLAG 176
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
++PV+ +S K+ R+ SV + + N E +A+ +++N
Sbjct: 177 --DLPVFALAISPAKAVRLRSVFPNLACLFMNRREALALTE----------LEQNA---- 220
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKT 244
+L + L +G+R +T G +L YG S
Sbjct: 221 ----SLPEILAALRNRGLRGGTITNGEGPILAF-----------------YGESA----- 254
Query: 245 VTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304
F + P++P + +TGAGD + GG +A++ G Q
Sbjct: 255 ----------------------FTIQPPSVP-GIADVTGAGDAMAGGVIAALMRGETFQQ 291
Query: 305 S 305
+
Sbjct: 292 A 292
>gi|33304089|gb|AAQ02552.1| ribokinase, partial [synthetic construct]
Length = 323
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|373459814|ref|ZP_09551581.1| rfaE bifunctional protein [Caldithrix abyssi DSM 13497]
gi|371721478|gb|EHO43249.1| rfaE bifunctional protein [Caldithrix abyssi DSM 13497]
Length = 334
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
Y LGG A NV+ + LG +P + +G D AG+IL++ + AG++TEGI D T +
Sbjct: 56 YHLGGAA-NVSINLKTLGCEPVTLGLVGNDRAGDILVQLLEEAGMTTEGILVSDDRPTTL 114
Query: 63 VSNILDVNGELAAA-VASVESIEKFLTPDWIRQFIHHISS-ASVLMVDAN---LSPPALA 117
+ I+ N +A +E + L I +F + S ++++ D N LS +
Sbjct: 115 KTRIIGDNQHIARVDREKIEYVNGPLAERIIERFEAVLDSIEAIVLEDYNKGVLSTQVIQ 174
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--ITVVSPNEDELVAMANALSGENMFRP 175
+ A + + PV +P + + ++Y +TV PN E V +AL RP
Sbjct: 175 HLTQKAQQLHKPVLVDP-------KFVNFLEYRNVTVFKPNIKETV---HALG-----RP 219
Query: 176 IDRNKH---SAESLFQTLKPAILVLLEKGIR 203
+D + + + L + L A VL+ +G R
Sbjct: 220 VDSDTEVELAGKELLERLN-AKCVLITRGGR 249
>gi|109102480|ref|XP_001100371.1| PREDICTED: ribokinase isoform 1 [Macaca mulatta]
Length = 286
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K G+STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGATTSMVCKVGKDSFGNDYIENLKQNGISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I++ G+ + + ++ L + +R + IS A V++ ++P + +A
Sbjct: 111 IIVNNGGQNIIVIVAGANL--LLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVNSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL +G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLRRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|398376763|ref|ZP_10534945.1| sugar kinase, ribokinase [Rhizobium sp. AP16]
gi|397727957|gb|EJK88381.1| sugar kinase, ribokinase [Rhizobium sp. AP16]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 118/303 (38%), Gaps = 76/303 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A NVA S+LG++ +G D G +LL + AG+S +R + TA +
Sbjct: 56 GGTAANVACAASRLGARVAGFGRVGRDADGQLLLTANEEAGISNTFLRVVEQ-PTAAATI 114
Query: 66 ILDVNGELAAAVASV--ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
I+D +GE A A + E I++ ++Q S + + +L+ + A
Sbjct: 115 IVDASGEKALVYAPMPGEPIDEVALSTALQQ------SRLLYAMPYDLAEFRQVTALARA 168
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
A I + E R+ ++++ +V NE R A
Sbjct: 169 AGVAIAIDIEAAVAPTRERLDALLECTDIVFMNEGGF-----------------RATSDA 211
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
+ +T++P LL+KG +LVV+T+G+ G + C
Sbjct: 212 DIAVETIRP----LLDKGPQLVVVTMGAAGAIAC-------------------------- 241
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVM 303
SR S+ + PA P +V TGAGDC G LA+ +G +
Sbjct: 242 ---SRTASAEH-----------------PAFPVKMVDATGAGDCFNGAFLAACFNGRTLE 281
Query: 304 QSV 306
S+
Sbjct: 282 DSL 284
>gi|238795152|ref|ZP_04638741.1| Ribokinase [Yersinia intermedia ATCC 29909]
gi|238725510|gb|EEQ17075.1| Ribokinase [Yersinia intermedia ATCC 29909]
Length = 308
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A + G+ I+ +G D G+ + + S + T I D T V
Sbjct: 39 FGGKGANQAVAAGRSGANIAFIACVGEDDIGDRVRQQLASDNIDTAPIEAIADTTTGVA- 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ VNGE + +TP+++ ++ H+ A L++ + A+ K+A
Sbjct: 98 -LIFVNGEGENVIGINAGANSAVTPEYLGRYQQHVIDADALLMQLESPLETVIAAAKLAK 156
Query: 125 ECNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ V P +R + ++ + +++PNE E A L+G ++ + D K
Sbjct: 157 QHQTQVILNPAP---ARELPDELLTLVDMITPNETE----AERLTGIHIEQDDDAAK--- 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A +L +KGI V++TLGS GV L +
Sbjct: 207 ---------AAQILHDKGIATVIITLGSRGVWLSEQ 233
>gi|347830595|emb|CCD46292.1| similar to IdgA domain protein [Botryotinia fuckeliana]
Length = 821
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 142/357 (39%), Gaps = 68/357 (19%)
Query: 5 LGGVARNVAECMSKLGSKPY-MISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDT 60
+GGV NV +P + + + D AG +L+ +S+GL+T+ I ++ D T
Sbjct: 455 IGGVGYNVLRAAQLSSKEPVSLYTFIADDQAGKSILQSLQSSGLNTDDITICPKETDYRT 514
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASV-----LMVDANLSPPA 115
A I D +L A+A ++ + IR IH S+ +++DAN
Sbjct: 515 AQYVAINDGKKDLVIAMADMDIFARPSNDPSIRT-IHSKLSSLTSSTKWVIIDANWKSEV 573
Query: 116 LAA--SCKIAAECNIPVWFEPVSVTKSRRI-----TSVVK----------YITVVSPNED 158
+ S ++ ++ + +EPVS KS R+ +S +K + + +PNE
Sbjct: 574 IQEFLSATKSSSSSVKIAYEPVSTIKSARLFERPTSSSLKANKLPVFPNNIVDLATPNEH 633
Query: 159 ELVAMANALSGENMFRPI-----------------DRNKH-SAESLFQTLKPAILVLLEK 200
EL +M +A + F DR H ++ L P V L
Sbjct: 634 ELTSMHDAATSHGKFETDEWWQTIDALGIPSTGARDRFVHMTSRELTDQGIPVKAVQLLP 693
Query: 201 GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEP 260
I ++ LGS GVLL S S R+ PY + SRC + E
Sbjct: 694 YIPTILTKLGSQGVLLTSILSPSDPRLRDPDHAPY---------ILSRC-----TNGNEE 739
Query: 261 AGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG-------LDVMQSVAV 308
GG + F V VV + G GD +G ++ ++ G +D+ Q AV
Sbjct: 740 VGGVYMRLFPVVEKVEEGDVVSVNGVGDTFMGVLISGLARGCELGDGLIDIAQKGAV 796
>gi|332812838|ref|XP_003308991.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase [Pan troglodytes]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVGSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|307132924|ref|YP_003884940.1| ribokinase [Dickeya dadantii 3937]
gi|306530453|gb|ADN00384.1| Ribokinase [Dickeya dadantii 3937]
Length = 403
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 110/285 (38%), Gaps = 73/285 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S G+K + +S +G D + EH + + + + + DT N
Sbjct: 136 GGKGANQAMAASMAGAKVHFVSKVGKDQFSHFAYEHLSKSAIHSFKLYQS---DTEPTGN 192
Query: 66 -ILDV---NGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
I+ V NGE A+ S K LT + I + + + A VL++ + PA ++ K
Sbjct: 193 AIIYVSLQNGENMIAIYS--GANKTLTDEEIAEIMPELEDADVLLLQMENNFPATLSAMK 250
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + + P + + S + Y+ +++PNE E A+ LSG + +D +
Sbjct: 251 LARALDTQIILNPAPYSDD--VLSCLDYVDIITPNETE----ASLLSGIEI-NNLDSARQ 303
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+A+ + G V++T+G++G LL
Sbjct: 304 AAQKIHAL-----------GAARVIITMGANGALLFD----------------------- 329
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGD 286
G QF H PA PA V TGAGD
Sbjct: 330 ---------------------GQQF--QHIPAFPAVSVDTTGAGD 351
>gi|419808569|ref|ZP_14333468.1| Hypothetical protein Yei C [Mycoplasma agalactiae 14628]
gi|390605474|gb|EIN14852.1| Hypothetical protein Yei C [Mycoplasma agalactiae 14628]
Length = 299
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGGVA N+A+ + + +I+A+G D+ + + + +S + I ++ V+
Sbjct: 35 LGGVAYNIAKNLKLANVQATLIAAVGDDLEAKWIKKQLDNDLISHKLIVKEGYKSAKYVA 94
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
LD N +++ A AS I + + D + Q+ + SA+ + +DANLS +A CK +
Sbjct: 95 -FLDRNSDMSIA-ASDTKITESVNYDDLMQYKDILDSATYICLDANLSEDLIAKICKNYS 152
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
I E VS K + V++YI+V+ N+ E + N+ S E
Sbjct: 153 HKFIVA--EGVSCHKILKFKPVLQYISVMKANKIEFQNLLNS---------------SEE 195
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+F AI + G + VV+T G++G + ++
Sbjct: 196 DIFILASEAI----KNGAKAVVITDGANGSIYFDQD 227
>gi|49343115|gb|AAT64917.1| RBSK [Homo sapiens]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQAKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|406604244|emb|CCH44330.1| hypothetical protein BN7_3892 [Wickerhamomyces ciferrii]
Length = 712
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 136/330 (41%), Gaps = 65/330 (19%)
Query: 5 LGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
+GGV NVA +KLG S IS +G D+ G L+ ++ I ++ T+
Sbjct: 378 IGGVGYNVALESTKLGNSSLKFISVVGDDIQGKSLINSLRT---KHNAIHIAENSTTSQY 434
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+ D +GEL A A + +E L + I I + S +++ DAN+S + +++
Sbjct: 435 ISHHDNDGELIIAAADMGIVENNLPIEHIENEIKN-SKPRIVLFDANISTKTMQFLIELS 493
Query: 124 AECNIPVWFEPVSVTKSRRITSVV------KYITVVSPNEDELVAMANALSGENMFRPID 177
AE + FEP S KS++I+ + I + +P +EL + +L F D
Sbjct: 494 AELKFKLIFEPTSAHKSKKISELKMSVFPNNSIELATPTINELKYIYESLEDLGKFELND 553
Query: 178 --------------RNKHSAES---------LFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
R+K A S LF+ + + + LL I+ +++ GS+GV
Sbjct: 554 WFPVIDALSVDKSIRSKLEAASLRDPFYKKLLFEGIFQSAISLL-PFIKTLIIKDGSNGV 612
Query: 215 LLCS-----KELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAV 269
L S +L S+ ++ + T T + E
Sbjct: 613 YLVSIYEDEVQLNSNAKLSIAST-------------TKEFKGHKIGILFE---------- 649
Query: 270 HFPA--LPASVVRLTGAGDCLVGGTLASIS 297
H+ A L + +TGAGD L G L S++
Sbjct: 650 HYEAIKLDQQISNVTGAGDALAGSLLTSLT 679
>gi|88857329|ref|ZP_01131972.1| putative fructokinase [Pseudoalteromonas tunicata D2]
gi|88820526|gb|EAR30338.1| putative fructokinase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +SKL + + +G DM G+ LLE + G++T+ ++ TA+
Sbjct: 28 GGAPANVAVAISKLQGESFFCGMVGNDMFGHFLLEQLQCYGVNTQWVKVTSVAKTALAFV 87
Query: 66 ILDVNGELAAAVASVESIEKF-----LTPDWIRQF-IHHISSASVL---MVDANLSPPAL 116
LD GE + + + +P+ +Q + H+ S S+ + A+L+ +
Sbjct: 88 SLDEQGERTFSFYRPPAADLLFRNTDFSPELFKQAKVFHLCSNSLTEKSIYHASLAGVKM 147
Query: 117 A--ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
A A I+ + N+ + P + + RI ++ +V ++EL + N
Sbjct: 148 AKNAGLTISFDINLRLNLWPSTRYTAERIWHIIGNADIVKFAQEELEFLCN--------- 198
Query: 175 PIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227
+ NK S TL+ I E+G++LV++T G+ + + + +S + I
Sbjct: 199 --NSNKPS------TLEQTIARCFEQGVKLVIVTNGAKPISVYTDNQMSEVAI 243
>gi|332289585|ref|YP_004420437.1| ribokinase [Gallibacterium anatis UMN179]
gi|330432481|gb|AEC17540.1| ribokinase [Gallibacterium anatis UMN179]
Length = 306
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 25/240 (10%)
Query: 2 NY--VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
NY V GG N A ++LG+K I+ +G D G + + ++ G++TE I +
Sbjct: 32 NYHIVYGGKGANQAVAAARLGAKVDFIACIGEDKIGLEMKQAFQKDGINTESIATIQGET 91
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + + +GE + +++ LT D + +F I A L++ A+ +
Sbjct: 92 TGIAMIQVTDSGENSIVISA--GANAHLTTDIVDKFKQKILDADALLMQLETPLDAIIYA 149
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
KIA + P ++ +T+++PNE E A L+G + +D
Sbjct: 150 TKIAKQAGKHTVLNPAPA--KALPDELLAQLTMITPNETE----AELLTG---VKVVDE- 199
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS---KELLSSMRIGLRKTKPYG 236
Q+ A V +KG+ +V++TLG+ GV + ++++ R+ + T G
Sbjct: 200 --------QSAAQAAAVFHQKGVAIVLITLGAKGVFISHNALQKIIPGFRVQAKDTTAAG 251
>gi|397513762|ref|XP_003827178.1| PREDICTED: ribokinase isoform 1 [Pan paniscus]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVGSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|403301836|ref|XP_003941583.1| PREDICTED: ribokinase isoform 1 [Saimiri boliviensis boliviensis]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSLVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAASIISRAKVMVCQLEINPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSN---VFCCNESE----AEILTGLTVGSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|416426954|ref|ZP_11693350.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416432289|ref|ZP_11696123.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416435877|ref|ZP_11698090.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416448589|ref|ZP_11706416.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416452871|ref|ZP_11709302.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416461566|ref|ZP_11715355.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416464366|ref|ZP_11716345.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416473075|ref|ZP_11719692.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416488327|ref|ZP_11725794.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416502111|ref|ZP_11732598.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416505653|ref|ZP_11734028.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416518075|ref|ZP_11739698.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416529161|ref|ZP_11744188.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416537497|ref|ZP_11748937.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416547704|ref|ZP_11754726.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416548456|ref|ZP_11754850.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416560606|ref|ZP_11761325.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416580203|ref|ZP_11771686.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416587290|ref|ZP_11775944.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416592783|ref|ZP_11779500.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416600692|ref|ZP_11784583.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416606049|ref|ZP_11787451.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416616259|ref|ZP_11793940.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416622807|ref|ZP_11797108.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416632939|ref|ZP_11801635.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416645303|ref|ZP_11807414.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416649480|ref|ZP_11809897.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416658965|ref|ZP_11814560.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416664986|ref|ZP_11816438.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416679363|ref|ZP_11823026.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416694423|ref|ZP_11827134.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704736|ref|ZP_11830427.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710823|ref|ZP_11834800.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416717949|ref|ZP_11840138.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723874|ref|ZP_11844499.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416729431|ref|ZP_11848013.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416742177|ref|ZP_11855646.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743689|ref|ZP_11856263.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416758927|ref|ZP_11863895.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764088|ref|ZP_11867745.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416769947|ref|ZP_11871350.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417471193|ref|ZP_12167224.1| Fructokinase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|418484534|ref|ZP_13053530.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418492039|ref|ZP_13058541.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418494893|ref|ZP_13061339.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499620|ref|ZP_13066025.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418505963|ref|ZP_13072305.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507030|ref|ZP_13073357.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526358|ref|ZP_13092335.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|322613171|gb|EFY10115.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619202|gb|EFY16085.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322626068|gb|EFY22880.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626472|gb|EFY23278.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632415|gb|EFY29163.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635103|gb|EFY31824.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642694|gb|EFY39284.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647983|gb|EFY44455.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650733|gb|EFY47134.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652916|gb|EFY49253.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657231|gb|EFY53511.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662281|gb|EFY58496.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666816|gb|EFY62992.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322672086|gb|EFY68201.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675808|gb|EFY71880.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681776|gb|EFY77802.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684029|gb|EFY80038.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193301|gb|EFZ78516.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323197658|gb|EFZ82791.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323200768|gb|EFZ85839.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323211429|gb|EFZ96270.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323218525|gb|EGA03233.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220992|gb|EGA05424.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225968|gb|EGA10187.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231648|gb|EGA15760.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236103|gb|EGA20181.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239475|gb|EGA23524.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243931|gb|EGA27942.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249294|gb|EGA33211.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250463|gb|EGA34346.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258917|gb|EGA42569.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323260162|gb|EGA43785.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265281|gb|EGA48778.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270503|gb|EGA53949.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|353623414|gb|EHC72696.1| Fructokinase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|363552856|gb|EHL37135.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363555918|gb|EHL40138.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363559363|gb|EHL43530.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363563196|gb|EHL47275.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363571043|gb|EHL54961.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363574711|gb|EHL58574.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|366058561|gb|EHN22848.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366058813|gb|EHN23093.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060555|gb|EHN24817.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366066650|gb|EHN30810.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366070735|gb|EHN34841.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366081991|gb|EHN45929.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828818|gb|EHN55698.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205690|gb|EHP19197.1| aminoimidazole riboside kinase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 319
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 112/294 (38%), Gaps = 62/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG + NV C+++LG + I LG D AG L + ++ G+ +R D+ +AV+
Sbjct: 30 GGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVSSLRLDADLTSAVLIV 89
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHH--ISSASVLMVDANLSPPALAASCKIA 123
L +GE + + +++P + F H +S+ + D L + ++
Sbjct: 90 NLTADGERSFTYLVHPGADTYVSPQDLPPFRQHEWFYFSSIGLTDRPAREACLEGARRM- 148
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
E V F+ +K R T + EL+A + AL+ + + S
Sbjct: 149 REAGGYVLFDVNLRSKMWRNTDEIP----------ELIARSTALASICKVSADELCQLSG 198
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
S +Q + L + G +++LG+DG LL + E
Sbjct: 199 ASHWQDAR---YYLRDLGCDTTIISLGADGALLITAE----------------------- 232
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+HFPA VV TGAGD VGG L ++S
Sbjct: 233 -----------------------GELHFPAPRVDVVDTTGAGDAFVGGLLFTLS 263
>gi|297667932|ref|XP_002812214.1| PREDICTED: ribokinase isoform 1 [Pongo abelii]
Length = 322
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVGSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|429764936|ref|ZP_19297243.1| kinase, PfkB family [Clostridium celatum DSM 1785]
gi|429187206|gb|EKY28123.1| kinase, PfkB family [Clostridium celatum DSM 1785]
Length = 323
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG NVA +SKLG K M++ LG+D G+ +LE K G+ + R K+ +TA+
Sbjct: 32 VAGGAPLNVAAAVSKLGGKSVMLTKLGVDGFGDHILEEVKPLGVDVSNVLRTKEANTALA 91
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIH------HISSASVL---MVDANLSPP 114
L +GE + S + L I++ + H S S++ + DA+
Sbjct: 92 FVSLKEDGERDFSFYRNPSADMLLNASEIKEEVFSEGGILHFCSVSLIDAPIKDAHRRAI 151
Query: 115 ALAA--SCKIAAECNI--PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGE 170
LA +C I+ + N+ P+W P + ++ I + + +V +++EL ++ E
Sbjct: 152 ELAKKNNCLISFDPNVRLPLWEIPEACKEA--ILEFLPFANIVKISDEEL-EFITGIADE 208
Query: 171 NMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ LL+ + +++ T G++G +KE
Sbjct: 209 T--------------------EALNFLLQGAVEVIIYTKGTNGAEFITKE 238
>gi|255659833|ref|ZP_05405242.1| ribokinase [Mitsuokella multacida DSM 20544]
gi|260847908|gb|EEX67915.1| ribokinase [Mitsuokella multacida DSM 20544]
Length = 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +K G+ M++ +G D + + +++ AG+ T+ +++ + + V
Sbjct: 37 GGKGANQAVAAAKYGADVLMMTKVGDDAFADNTIANFQKAGIDTKYVQKVPGVSSGVAPI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D +G+ ++ ++ ++L P I + + ++++ +S + + +
Sbjct: 97 FVDKSGQ--NSILIIKGANQYLLPKDIDDAEEDLKNCQLIILQLEISLETVYYAIDFGKK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P TK I + PNE EL A+ E +D + +A+S
Sbjct: 155 HGIPVLLNPAPATKELLIDKACQ-CDFFMPNETEL-----AILTEMPVSTLDEVEAAAKS 208
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L +++G++ V++T+GS G + SKE
Sbjct: 209 L-----------VDRGLKNVIVTMGSHGSMWISKE 232
>gi|434398465|ref|YP_007132469.1| ribokinase [Stanieria cyanosphaera PCC 7437]
gi|428269562|gb|AFZ35503.1| ribokinase [Stanieria cyanosphaera PCC 7437]
Length = 310
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A N A ++KLG ++I +G D G ILL++ + G+STEG+ + V S
Sbjct: 37 GGKAANQAVAVAKLGVPTHLIGQIGDDEFGQILLKNLHNLGISTEGVVINPHTHSGVASI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+++ G+ A A+ + +RQF + A V +++ + + A+ + A
Sbjct: 97 VVEERGDNIIACAA--GANNLVGEAELRQFQTLLPQAKVALLELGIPLSTVIAAAQTAKN 154
Query: 126 CNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
N V +P + + S+V IT PNE E A+ L G +
Sbjct: 155 SNCWVILDPAPAQPNLPNELYSLVDLIT---PNEIE----ASQLVGFTV----------- 196
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
T + A L + G + VV+TLG+ G CS
Sbjct: 197 -DGVTTARQAATFLHQMGAKNVVITLGNQGA-FCS 229
>gi|322835083|ref|YP_004215110.1| ribokinase [Rahnella sp. Y9602]
gi|384260306|ref|YP_005404240.1| ribokinase [Rahnella aquatilis HX2]
gi|321170284|gb|ADW75983.1| ribokinase [Rahnella sp. Y9602]
gi|380756282|gb|AFE60673.1| ribokinase [Rahnella aquatilis HX2]
Length = 309
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A + G+ I+ +G D G + + S + T I KD T V
Sbjct: 39 FGGKGANQAVAAGRSGADISFIACVGDDDIGERVRKQLASDHIDTHPIEAIKDTTTGVA- 97
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ VN E + K +TP+++ ++ + AS L++ + A+ KIA
Sbjct: 98 -LIFVNAEGENVIGIDAGANKAVTPEYLDRYKQQVIGASALLMQLESPLETVIAASKIAK 156
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ V P + ++ + +++PNE E A L+G +D N+ +A
Sbjct: 157 DNGTQVILNPAPACELP--DELLARVDIITPNETE----AEKLTGIK----VDSNEDAAR 206
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRI 227
A L +KGI V++TLGS GV L +L++ R+
Sbjct: 207 --------AANALHDKGITTVIITLGSKGVWLSQNGEGKLVAGFRV 244
>gi|392939200|ref|ZP_10304844.1| ribokinase [Thermoanaerobacter siderophilus SR4]
gi|392290950|gb|EIV99393.1| ribokinase [Thermoanaerobacter siderophilus SR4]
Length = 300
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG N A +LG++ YMI A+G G +++ +S G+ G+ ++ V
Sbjct: 36 IGGKGANQAVAAKRLGAQVYMIGAVGNSDGGRDIIKKLESEGIDVSGVLFTEE----VTG 91
Query: 65 NILDVNGELA-AAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
N + EL + L WI + I A +++ + + + K++
Sbjct: 92 NAMITIDELGFNTIVVYPGANAKLDSSWIERHSKIIEEADFVILQLEIPLETVETAVKLS 151
Query: 124 AECNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ N+ V P ++ I V KYI +++PNE EL +
Sbjct: 152 KKYNVKVILNPAP---AKEIPDEVYKYIDIITPNEVELTQLTGTTD-------------- 194
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
+K +L+EKG+ V++TLG G
Sbjct: 195 -------IKDGANMLIEKGVSEVIVTLGEKG 218
>gi|315304473|ref|ZP_07874753.1| carbohydrate kinase [Listeria ivanovii FSL F6-596]
gi|313627160|gb|EFR96013.1| carbohydrate kinase [Listeria ivanovii FSL F6-596]
Length = 372
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAG---LSTEGIRRQKDIDTAV 62
GGVARNV E + +LG + +++A G D E KSA ++ + I T
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSD----WEAVKSASNTYMNLDYATAFPSIATGS 155
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ +L+ NG+L A+A +E+ + LTPD + + +S AS ++ D N L
Sbjct: 156 YTAVLENNGDLLVALADMEAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSF 214
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A +IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 215 AEINSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLGMTIESD--- 263
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A LE G+ V++T GS G + +K
Sbjct: 264 -----EDWRLAAERWLELGVENVIVTNGSKGAVAANK 295
>gi|407773072|ref|ZP_11120373.1| ribokinase [Thalassospira profundimaris WP0211]
gi|407283536|gb|EKF09064.1| ribokinase [Thalassospira profundimaris WP0211]
Length = 307
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++LG P IS +G DM GN L+E + GL T + + T +
Sbjct: 37 GGKGCNQALAVARLGVDPVFISKIGDDMLGNQLIETLAAEGLDTTHLIVADEAQTGIALI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC--KIA 123
+D GE + V +T + + ++ L++ L P +A C K A
Sbjct: 97 SIDEAGE--NMITVVGGANMTMTRSDLHEKQDYLRDCDYLLL--QLECPVVAIDCAIKYA 152
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
E V +P V + ++ +V+PN+ E +A+ P+D S+
Sbjct: 153 REGKAKVMLDPAPVADLVVMRDLLALTHIVTPNQSECLALTG-------IDPVDEATASS 205
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
S + L + G V++ +G DG S
Sbjct: 206 AS---------IKLHDMGPETVIIKMGGDGAFYSS 231
>gi|395785787|ref|ZP_10465515.1| ribokinase [Bartonella tamiae Th239]
gi|423717318|ref|ZP_17691508.1| ribokinase [Bartonella tamiae Th307]
gi|395424245|gb|EJF90432.1| ribokinase [Bartonella tamiae Th239]
gi|395427533|gb|EJF93624.1| ribokinase [Bartonella tamiae Th307]
Length = 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 102/285 (35%), Gaps = 67/285 (23%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +K G K MI +G D AG L E+ ++ + T + DI T+
Sbjct: 40 GGKGNNQAVSAAKFGKKVTMIGCIGNDSAGKQLKENLENRNIDTSNLLILDDIITSSCCA 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D NG+ V ++ L+ + + I L+V S ++ A K A +
Sbjct: 100 IIDKNGDNTLLVNMTANLA--LSEAHVTNVFNKI-DVKALLVQMETSKESILAGLKAAKK 156
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
I +P V Y ++ PN +E + N P D A +
Sbjct: 157 KGIFTIIDPAPVNGIDE--QYFHYADLIVPNSNETKFITN-------IEPTDE----ASA 203
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
L A ++ +KG++ V++ +G +G LL K
Sbjct: 204 L-----EAAKIIADKGVKNVIVKMGQNGCLLYQK-------------------------- 232
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVG 290
G SQF +P++ V GAGDC G
Sbjct: 233 ----------------GHSQF----YPSMKVKAVDTVGAGDCFAG 257
>gi|83593632|ref|YP_427384.1| ribokinase [Rhodospirillum rubrum ATCC 11170]
gi|386350375|ref|YP_006048623.1| ribokinase [Rhodospirillum rubrum F11]
gi|83576546|gb|ABC23097.1| Ribokinase [Rhodospirillum rubrum ATCC 11170]
gi|346718811|gb|AEO48826.1| ribokinase [Rhodospirillum rubrum F11]
Length = 309
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 104/235 (44%), Gaps = 23/235 (9%)
Query: 2 NYVLG--GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
N+ LG G N A ++LG+ M++ +G D+ + + ++K+ G+ T +R+
Sbjct: 33 NFALGCGGKGANQAIAAARLGADVLMVTRVGDDIFADNTIANFKANGIDTRFVRKVPGTP 92
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
+ V ++ NGE ++ V+ L+P + + + +++++ + + A+
Sbjct: 93 SGVAPIFVEQNGE--NSILIVKGANAHLSPADVEEAGEALKGCALILMQLEVPLETIYAT 150
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRN 179
A IP P + ++ ++ ++PNE EL LSG P+
Sbjct: 151 VAFGAAHGIPTLLNPAPAVPELDVER-LRTLSFLTPNETELA----ILSG----MPVASE 201
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKP 234
++ A L+ KG+R V++T+G+ G LL ++ + RI + P
Sbjct: 202 TE--------VEAAARSLIAKGVRTVIVTMGARGALLVEEK--GATRIAPVRVTP 246
>gi|410723614|ref|ZP_11362848.1| ribokinase [Clostridium sp. Maddingley MBC34-26]
gi|410603078|gb|EKQ57523.1| ribokinase [Clostridium sp. Maddingley MBC34-26]
Length = 311
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A + +LG+K M+ +G D+ G+ LE K ++ + +K I + +
Sbjct: 38 GGKGANQAVALGRLGAKVIMVGKVGEDIYGSKYLEVLKDNNVNYNCLHVEKGISSGIAVI 97
Query: 66 ILDVNGE-----LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
++ GE + A +V+ K++ W + I A + + + + +
Sbjct: 98 QVNYRGENNIIIIPGANGAVDI--KYIESKW-----NTIVEADIFLFQLEIPMITVIDTM 150
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
K + +P TK + KYI ++PNE E+ AL+G N+ K
Sbjct: 151 KKLKNRGKTIILDPAPATKLPD--EIFKYIDYITPNETEI----EALTGINI-------K 197
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213
E LK A VLL+KG+++V+ LGS G
Sbjct: 198 SEEE-----LKKAAQVLLDKGVKVVIPKLGSKG 225
>gi|386315003|ref|YP_006011168.1| ribokinase [Shewanella putrefaciens 200]
gi|319427628|gb|ADV55702.1| ribokinase [Shewanella putrefaciens 200]
Length = 303
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 6 GGVARNVAECMSKLGSKPY----MISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
GG N A ++L +KP I LG D G+ +L+ W G+S EGI + ++ T
Sbjct: 38 GGKGANQAVACARL-AKPDTHIDFICRLGKDSVGDDMLQSWLKDGISAEGITQTSNMSTG 96
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ NGE VA+ + + L P+ + + ++A L++ +A + +
Sbjct: 97 TAMIFIGDNGENTIGVAAGANAD--LLPEDLENYYALFANAQYLLIQLETPLTTVAKALQ 154
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+A + P + ++++ +++PNE E A AL+G + D H
Sbjct: 155 MAKRLGVTTVLNPAPAKVLG--PNYLQWVDIITPNETE----AAALTGVEINHLDD--AH 206
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
A L L ++G+ +VV+TLG+ G + S
Sbjct: 207 LAAQL----------LHQQGVGIVVITLGAKGAYISSPHF 236
>gi|402890434|ref|XP_003908493.1| PREDICTED: ribokinase isoform 1 [Papio anubis]
Length = 322
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGATTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAH 168
Query: 125 ECNIPVWFEPVSVTKS--RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVNSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL +G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLRRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|168334218|ref|ZP_02692421.1| PfkB domain protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 317
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 38/235 (16%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NV C++KLG I +G DM G L + + AG++ G+ K+ T +
Sbjct: 30 GGAPANVLACLAKLGIPTAFIGKIGDDMQGKFLYKTLEDAGINVSGLIVDKNYFTTLAFV 89
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
L GE R F + +M++ + A KI
Sbjct: 90 SLSETGE--------------------RNFSFARKPGADIMLNKEELNSDILAKTKIFHF 129
Query: 126 CNIPVWFEP------VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRP---I 176
++ + EP V++ +++ +++ Y PN L+ + ++ E M P +
Sbjct: 130 GSLSLTHEPSREATYVAIKFAKKNGAIISY----DPNYRALLWESKEIAKEQMRLPLQYV 185
Query: 177 DRNKHSAESL-----FQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
D K S E + + A LL+KGI++VV+TLG DG L+ K + ++
Sbjct: 186 DVLKISDEECELLTDEKDIYKACEHLLKKGIKIVVITLGKDGALVGYKNDMKKIK 240
>gi|107023090|ref|YP_621417.1| ribokinase [Burkholderia cenocepacia AU 1054]
gi|105893279|gb|ABF76444.1| Ribokinase [Burkholderia cenocepacia AU 1054]
Length = 320
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 118/253 (46%), Gaps = 31/253 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ M++ +G D+ + + +++ G+ T +R+ + + V
Sbjct: 50 GGKGANQAVAAARLGARVVMVTKVGDDVFADNTIRNFEREGIDTTHVRKVAGVPSGVAP- 108
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + + ++ V+ + L P I ++ +++++ + + + + A
Sbjct: 109 -IFVEPDSSNSILIVKGANRHLQPTDIDAAAPMLAECALIVLQLEIELDTVYHAIEFGAR 167
Query: 126 CNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P V+ RI SV ++ PNE EL A+ + L P+D S
Sbjct: 168 HGIPVLLNPAPAVADLDFERIRSVEFFV----PNETEL-AIVSGL-------PVD----S 211
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE---LLSSMRIGLRKTKPYGFSR 239
ES + A L+ +G++ V++TLGS+G LL S++ + + + R T G
Sbjct: 212 RESATR----AAEALVARGLKHVLVTLGSNGSLLVSRDGVHHVPGVPVDARDTTGAG--- 264
Query: 240 DLYKTVTSRCHSS 252
D Y +RC+++
Sbjct: 265 DAYIGCFARCYAA 277
>gi|429854585|gb|ELA29589.1| IdgA domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 785
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 136/353 (38%), Gaps = 70/353 (19%)
Query: 1 VNYVLGGVARNVAECMSKLGSKP--YMISALGLDMAGNILLEHWKSAGLSTEGIRR---- 54
+N +GGV NVA ++ + S +G D+AG +L +S+GL T IR+
Sbjct: 432 INQSIGGVGHNVALAAHRVSKDVSVRLCSMVGDDVAGKTVLSSLESSGLDTTYIRQLGSE 491
Query: 55 -QKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSP 113
TA + D L A+A + P++ + + + L+VD N SP
Sbjct: 492 YHHSNRTAQYVAVNDAEKNLVVAMADMGIFANHSFPEYWKSAVSG-AKPGWLVVDGNWSP 550
Query: 114 PALAA---SCKIAAECNIPVWFEPVSVTKS-----RRITSVVKY----ITVVSPNEDELV 161
+ A +C +A FEPVS KS R + + I + SPN EL
Sbjct: 551 KDIRAWIQACGVA--------FEPVSTAKSIGLFPREHPHLGVFPNPGIDIASPNNFELT 602
Query: 162 AMANALSGEN-------MFRPIDR-NKHSAESLFQTLK---------PAILVLLEKGIRL 204
AM A + EN F ID N A F L P + L I
Sbjct: 603 AMYTA-AKENGFFDTPEWFEVIDAFNMRGARERFVQLTSAEMTDAGIPVQTIHLLPYIPT 661
Query: 205 VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGS 264
+V LGS GVLL + R+ R + + +R + P G
Sbjct: 662 LVTKLGSKGVLLTTILGRDDPRLKDRSEERWLLTR---------------APVDHPTIGG 706
Query: 265 QFFAVHFPALPAS---VVRLTGAGDCLVGGTLASISSG------LDVMQSVAV 308
+ + PA + +V + G GD +G +A ++ G +DV Q AV
Sbjct: 707 VYMRLFPPAEKVAIEDIVSVNGVGDTFLGVMIAGLAKGGKVQNLIDVAQKAAV 759
>gi|217963561|ref|YP_002349239.1| carbohydrate kinase, PfkB family [Listeria monocytogenes HCC23]
gi|290893628|ref|ZP_06556610.1| carbohydrate kinase [Listeria monocytogenes FSL J2-071]
gi|386009053|ref|YP_005927331.1| carbohydrate kinase, PfkB family [Listeria monocytogenes L99]
gi|386027666|ref|YP_005948442.1| putative sugar kinases of the ribokinase family; cAMP Regulatory
domain present [Listeria monocytogenes M7]
gi|404408719|ref|YP_006691434.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2376]
gi|217332831|gb|ACK38625.1| carbohydrate kinase, PfkB family [Listeria monocytogenes HCC23]
gi|290556830|gb|EFD90362.1| carbohydrate kinase [Listeria monocytogenes FSL J2-071]
gi|307571863|emb|CAR85042.1| carbohydrate kinase, PfkB family [Listeria monocytogenes L99]
gi|336024247|gb|AEH93384.1| putative sugar kinases of the ribokinase family; cAMP Regulatory
domain present [Listeria monocytogenes M7]
gi|404242868|emb|CBY64268.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2376]
Length = 372
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 218 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLDMTIEND------ 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A L+ G++ V++T GS G + +K
Sbjct: 264 --EDWRLAAQKWLDLGVKNVIVTNGSKGAVAANK 295
>gi|424715158|ref|YP_007015873.1| Uncharacterized sugar kinase YeiI [Listeria monocytogenes serotype
4b str. LL195]
gi|424014342|emb|CCO64882.1| Uncharacterized sugar kinase YeiI [Listeria monocytogenes serotype
4b str. LL195]
Length = 412
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 140 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 198
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 199 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 257
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 258 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 291
>gi|219849772|ref|YP_002464205.1| ribokinase [Chloroflexus aggregans DSM 9485]
gi|219544031|gb|ACL25769.1| ribokinase [Chloroflexus aggregans DSM 9485]
Length = 302
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ MI +G+D G+ LL+ + G+ T ++R D T V
Sbjct: 39 GGKGANQAVAAARLGARVRMIGRVGVDAFGDALLDAAQYDGVDTGYVQRDPDAATGVALI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
LD +G+ VA ++ ++ +++ A VL++ A+ A+ ++A
Sbjct: 99 TLDAHGQNTIVVALGANMR--VSEADVQRAEALFQGADVLLMQLECPLDAVMAATELAHR 156
Query: 126 CNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ V P +R + +++ I + PN+ EL A+A GE
Sbjct: 157 YGVQVVLNP---APARPLPVALLSQIDYLLPNQLELQALAE---GET------------- 197
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
L AI L +G+R +++TLGS+G LL + E
Sbjct: 198 ----DLTAAIERLQRQGVRNLLVTLGSEGALLATAE 229
>gi|418543400|ref|ZP_13108759.1| ribokinase [Burkholderia pseudomallei 1258a]
gi|418549936|ref|ZP_13114946.1| ribokinase [Burkholderia pseudomallei 1258b]
gi|385352931|gb|EIF59311.1| ribokinase [Burkholderia pseudomallei 1258a]
gi|385353281|gb|EIF59635.1| ribokinase [Burkholderia pseudomallei 1258b]
Length = 310
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ ++ + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIAIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|16804379|ref|NP_465864.1| hypothetical protein lmo2341 [Listeria monocytogenes EGD-e]
gi|255025510|ref|ZP_05297496.1| hypothetical protein LmonocytFSL_02763 [Listeria monocytogenes FSL
J2-003]
gi|284802782|ref|YP_003414647.1| hypothetical protein LM5578_2539 [Listeria monocytogenes 08-5578]
gi|284995924|ref|YP_003417692.1| hypothetical protein LM5923_2489 [Listeria monocytogenes 08-5923]
gi|386044644|ref|YP_005963449.1| hypothetical protein [Listeria monocytogenes 10403S]
gi|386051312|ref|YP_005969303.1| carbohydrate kinase [Listeria monocytogenes FSL R2-561]
gi|386054533|ref|YP_005972091.1| carbohydrate kinase [Listeria monocytogenes Finland 1998]
gi|404284833|ref|YP_006685730.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2372]
gi|404411584|ref|YP_006697172.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC5850]
gi|404414361|ref|YP_006699948.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC7179]
gi|405759388|ref|YP_006688664.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2479]
gi|16411829|emb|CAD00419.1| lmo2341 [Listeria monocytogenes EGD-e]
gi|284058344|gb|ADB69285.1| hypothetical protein LM5578_2539 [Listeria monocytogenes 08-5578]
gi|284061391|gb|ADB72330.1| hypothetical protein LM5923_2489 [Listeria monocytogenes 08-5923]
gi|345537878|gb|AEO07318.1| hypothetical protein LMRG_01502 [Listeria monocytogenes 10403S]
gi|346425158|gb|AEO26683.1| carbohydrate kinase [Listeria monocytogenes FSL R2-561]
gi|346647184|gb|AEO39809.1| carbohydrate kinase [Listeria monocytogenes Finland 1998]
gi|404231410|emb|CBY52814.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC5850]
gi|404234335|emb|CBY55738.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2372]
gi|404237270|emb|CBY58672.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2479]
gi|404240060|emb|CBY61461.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC7179]
Length = 372
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 218 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLDMTIEND------ 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A L+ G++ V++T GS G + +K
Sbjct: 264 --EDWRLAAQKWLDLGVKNVIVTNGSKGAVAANK 295
>gi|422010253|ref|ZP_16357234.1| putative carbohydrate kinase [Providencia rettgeri Dmel1]
gi|414091556|gb|EKT53239.1| putative carbohydrate kinase [Providencia rettgeri Dmel1]
Length = 309
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +KL SK M++ +G D+ + + + +S G++T + + + V
Sbjct: 37 GGKGANQAVAAAKLNSKVIMLTKVGDDIFADNTIRNLESYGINTRYVEKVPCTSSGVAP- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + ++ V+ KFL+P+ I + + ++++ + + + +
Sbjct: 96 -IFVNQNSSNSILIVKGANKFLSPEDIDRAAEDLKKCKLIVLQLEVQLETVYHAISFGNK 154
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P ++ + + V PNE EL + N P+D
Sbjct: 155 HGIPVLLNPAPAQRTLDLDFACRCDFFV-PNETELEILTNM--------PVDT------- 198
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
++ A LL+KG++ V++TLG G L +++
Sbjct: 199 -MDNIRRAAQSLLDKGLKNVIVTLGEKGALWMTRD 232
>gi|122921144|pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens
Length = 317
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G ++ E + AG+ D T +
Sbjct: 39 GGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFL-DRRTPSYTA 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ +G L A+A ++ + K TP +R I ++ L+ DANL L A IA
Sbjct: 98 ILERDGNLVIALADMD-LYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIA 156
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 157 RACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAE----ARALTGET 200
>gi|420129192|ref|ZP_14637731.1| pseudouridine kinase, partial [Escherichia coli O26:H11 str.
CVM10224]
gi|424754177|ref|ZP_18182095.1| pseudouridine kinase, partial [Escherichia coli O26:H11 str.
CFSAN001629]
gi|394383568|gb|EJE61165.1| pseudouridine kinase, partial [Escherichia coli O26:H11 str.
CVM10224]
gi|421933667|gb|EKT91452.1| pseudouridine kinase, partial [Escherichia coli O26:H11 str.
CFSAN001629]
Length = 143
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN 110
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCN 143
>gi|225390358|ref|ZP_03760082.1| hypothetical protein CLOSTASPAR_04111 [Clostridium asparagiforme
DSM 15981]
gi|225043578|gb|EEG53824.1| hypothetical protein CLOSTASPAR_04111 [Clostridium asparagiforme
DSM 15981]
Length = 312
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ Y +GG N A +LG + ++ +G D G+ +E ++AG+ G+R+ + T
Sbjct: 34 LGYQMGGKGANQACACGRLGGEVKILGCVGRDEFGSRQIESLEAAGVDASGLRQSPGLPT 93
Query: 61 AVVSNILDVNGELAAAV---ASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
+D NG+ + V A+ E E++L R+ ++++ + A+
Sbjct: 94 GTAVIYVDGNGDNSIVVIPGANRECGEQYL-----RERDELFQWCGIVVLQMEIPMEAVL 148
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPID 177
+ + E V P R ++ + ++PNE EL LSG D
Sbjct: 149 YAARRGRELGKTVILNPAPAP-DRLPDELLGLVDYLTPNETELA----KLSGIAAMGQAD 203
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LK A L+EKG++ V++TLG G LL E
Sbjct: 204 ------------LKRAARRLIEKGVKKVLVTLGEQGALLVDGE 234
>gi|310778130|ref|YP_003966463.1| ribokinase [Ilyobacter polytropus DSM 2926]
gi|309747453|gb|ADO82115.1| ribokinase [Ilyobacter polytropus DSM 2926]
Length = 305
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 113/294 (38%), Gaps = 66/294 (22%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A M++LGS MI LG D G+ LL K G+ GI R KDI T + +
Sbjct: 38 GGKGANQAVAMARLGSDVAMIGMLGKDSFGDTLLSVIKKDGVDISGIGRCKDISTGIATI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D + + V + E + I I ++ +++ + S KI+ +
Sbjct: 98 VVDDDANNSIIVVPGANFE--IEKKDIDANIKLYENSEIVVHQLETPLDIVEYSLKISKK 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
P KS ++K + + PNE EL +A P+ +NK E
Sbjct: 156 LGKTTILNPAP-AKSMS-DEIIKNVDYLIPNETELELLAGV--------PV-KNK---ED 201
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245
+ + + ++ KG++ +++TLGS G + ++
Sbjct: 202 ILKACRK----IMAKGVKKLIVTLGSKGAIYVDEK------------------------- 232
Query: 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
GS+ F V+ V T AGD +GG A+IS G
Sbjct: 233 -----------------GSKEFGVY----KVDAVDTTAAGDSFIGGLTAAISKG 265
>gi|168069513|ref|XP_001786477.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162661222|gb|EDQ48710.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 286
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
V+ GGVARNVAE + LG + ++ + +G D G L + +G++T G+ R T
Sbjct: 42 VHQTAGGVARNVAESLGWLGEEVHLYALVGEDSDGEWLRQITADSGVATHGMFRVPGRST 101
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ D++ EL AVA + +I I+ + + A+ L +DANL P + A
Sbjct: 102 GRYLAVCDLDEELYTAVADM-AINDAWNTSMIQSGLLSLQQAAGLFMDANLPLPVMEAID 160
Query: 121 KIAAEC 126
++ C
Sbjct: 161 EMETLC 166
>gi|417298388|ref|ZP_12085627.1| carbohydrate kinase, PfkB domain protein [Escherichia coli 900105
(10e)]
gi|386258068|gb|EIJ13550.1| carbohydrate kinase, PfkB domain protein [Escherichia coli 900105
(10e)]
Length = 146
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN 110
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHREFIQRAKVIVADCN 143
>gi|404319638|ref|ZP_10967571.1| ribokinase [Ochrobactrum anthropi CTS-325]
Length = 312
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++K+G + A+G D G + L+ + GL+TE +R +DT + I+ V
Sbjct: 46 NQAVAVAKMGGDIRFVGAVGNDAFGELALKQMQEFGLNTESVRVIDGVDTGMA--IIQVE 103
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
+A + + I + I+ A + ++ + A A K A V
Sbjct: 104 EAGQNTIAVCAGANAYWSAADINAYAADIARAKITLLQREVPHEANLAVAKAARAAGGSV 163
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + R+ ++ ++SPNE E A ++G P D SAE+ +
Sbjct: 164 LLDPAPVGDASRMADLISLSDIISPNETE----AAEITG---IEPTDL--ASAEAAARN- 213
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
LLE+G + V++ LGS G LL + +
Sbjct: 214 ------LLERGPKTVIVKLGSRGALLVTAD 237
>gi|259502832|ref|ZP_05745734.1| ribokinase [Lactobacillus antri DSM 16041]
gi|259169199|gb|EEW53694.1| ribokinase [Lactobacillus antri DSM 16041]
Length = 305
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++ G++ I +G D +G ++L K+ G+ GIR + T S
Sbjct: 38 GGKGANQAVSAARSGAQTAFIGEVGKDNSGQMMLSEMKANGIDVAGIRENDQVGTGTASI 97
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+LD NG+ + + + L+P + I++A ++ A + ++A E
Sbjct: 98 LLDENGQNSILIYG--GANQQLSPADVEAAQDKITTADFVVAQFETPQAATLRAFQLAKE 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ P K V+K ++ PNE E + + + I K +
Sbjct: 156 NGVATILNPAPAQKID--PEVLKLTDLIIPNETESAELTGVIITDETSMLISAAKFA--- 210
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ G+R +++T+G+ G C+++
Sbjct: 211 -------------QMGVRNLIITVGAKGAFYCTQD 232
>gi|347752164|ref|YP_004859729.1| PfkB domain-containing protein [Bacillus coagulans 36D1]
gi|347584682|gb|AEP00949.1| PfkB domain protein [Bacillus coagulans 36D1]
Length = 307
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A + LG K M+ ++G D AGN +LE+ +S G+ G+ + T
Sbjct: 39 GGKGANQAASAATLGKKVAMVGSVGNDSAGNQMLENLRSRGVDVTGVMKTDKAGTGTFIA 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++D +GE V ++ + E D + F + A +L++ S ++ A+ K+A +
Sbjct: 99 LVDQSGE-NTMVGTIGANEALTGQDIEKAFANL--KAKILLIQMETSKESILAAMKLAKQ 155
Query: 126 CNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAM 163
+ V +P + IT +Y +V PN E A+
Sbjct: 156 RGMYVILDPAP---AGGITPEAFRYADLVLPNSQETEAI 191
>gi|221194905|ref|ZP_03567961.1| fructokinase [Atopobium rimae ATCC 49626]
gi|221184808|gb|EEE17199.1| fructokinase [Atopobium rimae ATCC 49626]
Length = 316
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 125/330 (37%), Gaps = 84/330 (25%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NV + +LG I +G DM G+ L + ++ +G+ + T +
Sbjct: 32 GGAPANVLVALERLGKSTAFIGKVGADMHGDFLRATLVTTDVNCDGLITDPNYFTTLAFV 91
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFI------HHISSASVLMVDANLS-----PP 114
L GE + A + L P+ IR I H+ S S+ A +
Sbjct: 92 ALSEEGERTFSFARKPGADTRLAPEEIRTDIIEKSRVFHVGSLSLTDEPARSATIAALKA 151
Query: 115 ALAASCKIAAECNI--PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
A A C ++ + N +W P S ++ S+V+Y+ +V NE+E L+G
Sbjct: 152 AKNAGCILSYDPNYRASLWDNP--EVASVQMQSIVEYMDLVKINEEE----TTLLTGH-- 203
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232
D +AE+ LL KG+++ +TLG +GVL+ +KE ++ +
Sbjct: 204 ----DDPAQAAEA-----------LLAKGVKVACVTLGGEGVLVATKEGVAMV------- 241
Query: 233 KPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGT 292
PA V TGAGD GG
Sbjct: 242 ---------------------------------------PAFTVEAVDTTGAGDSFWGGF 262
Query: 293 L-ASISSGLDVMQSVAVDDAKTVYAAANVL 321
L A + SG DV ++++D KT N +
Sbjct: 263 LCALLDSGADVAD-ISLEDVKTCARFGNAV 291
>gi|265985790|ref|ZP_06098525.1| ribokinase [Brucella sp. 83/13]
gi|306839310|ref|ZP_07472126.1| ribokinase [Brucella sp. NF 2653]
gi|264664382|gb|EEZ34643.1| ribokinase [Brucella sp. 83/13]
gi|306405558|gb|EFM61821.1| ribokinase [Brucella sp. NF 2653]
Length = 313
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 11 NVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVN 70
N A ++KLG + A+G D G + L + GL T +R ++DT + ++
Sbjct: 49 NQAVAVAKLGGAIRFVGAVGHDAFGELALRQMREFGLDTGSVRVIDNVDTGMAIIQVEET 108
Query: 71 GELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPV 130
G+ AV + + ++ + D I + I+ A + ++ + A A K V
Sbjct: 109 GQNTIAVCAGAN-ARWSSAD-IDAYRADIAKARITLLQREVPHEANLAVAKAVRAAGGTV 166
Query: 131 WFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTL 190
+P V + ++ ++ ++SPNE E A ++G P D +
Sbjct: 167 LLDPAPVGDASQMADLIALSDIISPNETE----AAEITG---IEPTD---------LASA 210
Query: 191 KPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ A LLE+G ++V+L LGS G LL + +
Sbjct: 211 EAAGRKLLERGPKIVILKLGSRGALLVTAD 240
>gi|355715594|gb|AES05377.1| ribokinase [Mustela putorius furo]
Length = 292
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 41/274 (14%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K M+ +G D GN +E+ K +STE + +D T S
Sbjct: 22 FGGKGANQCVQAARLGAKTSMVCKVGKDSFGNDYIENLKQNDISTEFAYQTQDAATGTAS 81
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +++ IS A V++ ++P + +A
Sbjct: 82 II--VNNEGQNIIVIVAGANLLLNTEDLKKAARTISRAKVMICQLEITPETSLEALMMAH 139
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P V+ R T V NE E A L+G + D +
Sbjct: 140 SNGVKTLFNPAPAVADLDPRFYT----LSDVFCCNETE----AEILTGLKVHSLADATR- 190
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
A L+L KG +V++TLG++G ++ SK + P +
Sbjct: 191 -----------AALLLKGKGCHVVIITLGAEGCVMLSK----------TEPMPKHIPTEK 229
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP 275
K V + + GA+ F+ ++P LP
Sbjct: 230 VKAVDTTGAGDSFVGAL------AFYLAYYPNLP 257
>gi|335036227|ref|ZP_08529554.1| carbohydrate kinase [Agrobacterium sp. ATCC 31749]
gi|333792118|gb|EGL63488.1| carbohydrate kinase [Agrobacterium sp. ATCC 31749]
Length = 313
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G ++ E + AG+ D T +
Sbjct: 37 GGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFL-DRRTPSYTA 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ +G L A+A ++ + K TP +R I ++ L+ DANL L A IA
Sbjct: 96 ILERDGNLVIALADMD-LYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIA 154
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 155 RACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAE----ARALTGET 198
>gi|113971638|ref|YP_735431.1| ribokinase [Shewanella sp. MR-4]
gi|114046156|ref|YP_736706.1| ribokinase [Shewanella sp. MR-7]
gi|113886322|gb|ABI40374.1| ribokinase [Shewanella sp. MR-4]
gi|113887598|gb|ABI41649.1| ribokinase [Shewanella sp. MR-7]
Length = 303
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 23/216 (10%)
Query: 6 GGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
GG N A ++L S+ I LG D GN + E+W G+ +GI + ++ T
Sbjct: 38 GGKGANQAVACARLCQADSRVDFICHLGQDSVGNEMRENWLKDGIEADGITQVANLSTGT 97
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ NGE + +A+ LTP + + +A +++ + + +
Sbjct: 98 AMIFVADNGENSIGIAA--GANANLTPPELEKHYALFVNAQYMLIQLETPMETVNHALQT 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A I P +K++ +++PNE E A AL+G I+ N
Sbjct: 156 AKRLGITTVLNPAPAVSQE--LDYLKWVDIITPNETE----AEALTG------IEVNNED 203
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
L A +L ++G+ VV+TLGS G + S
Sbjct: 204 DAKL------AAQLLHQQGVTTVVITLGSKGAFISS 233
>gi|116686668|ref|YP_839915.1| ribokinase [Burkholderia cenocepacia HI2424]
gi|116652383|gb|ABK13022.1| ribokinase [Burkholderia cenocepacia HI2424]
Length = 320
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 31/253 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ M++ +G D+ + + +++ G+ T +R+ + + V
Sbjct: 50 GGKGANQAVAAARLGARVVMVTKVGDDVFADNTIRNFEREGIDTTHVRKVAGVPSGVAP- 108
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + + ++ V+ + L P I ++ +++++ + + + + A
Sbjct: 109 -IFVEPDSSNSILIVKGANRHLQPADIDAAAPMLAECALIVLQLEIELDTVYHAIEFGAR 167
Query: 126 CNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P V+ RI SV ++ PNE EL A+ + L P+D S
Sbjct: 168 HGIPVLLNPAPAVADLDFERIRSVEFFV----PNETEL-AIVSGL-------PVD----S 211
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE---LLSSMRIGLRKTKPYGFSR 239
ES + + L+ +G++ V++TLGS+G LL S++ + + + R T G
Sbjct: 212 RESATRAAE----ALVARGLKHVLVTLGSNGSLLVSRDGVHHVPGVPVDARDTTGAG--- 264
Query: 240 DLYKTVTSRCHSS 252
D Y +RC+++
Sbjct: 265 DAYIGCFARCYAA 277
>gi|365156608|ref|ZP_09352912.1| hypothetical protein HMPREF1015_02915 [Bacillus smithii 7_3_47FAA]
gi|363627121|gb|EHL78063.1| hypothetical protein HMPREF1015_02915 [Bacillus smithii 7_3_47FAA]
Length = 323
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 36/227 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +++ G K YMI+ LG+D G+ LLE + AG++TE ++R + +T +
Sbjct: 34 GGAPANVAVAVARFGGKAYMITKLGMDAFGDFLLEQLQQAGVNTETVKRTNEANTGLAFV 93
Query: 66 ILDVNGELAAAVASVESI-----EKFLTPDWIRQF-IHHISSASVL---MVDANLSPPAL 116
L +GE + S EK + W I H S ++ M A++ L
Sbjct: 94 SLRHDGERDFSFYRNPSADLLLSEKEIEDGWFEDGDILHFCSVDLVESPMKKAHIKAIHL 153
Query: 117 AAS----CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
A IP+W P + K+ I V ++ +E+EL +
Sbjct: 154 AKEKGSIISFDPNVRIPLWNNPETCRKT--ILEFVPMAHILKISEEELEFITG------- 204
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ AI L +R ++ T G++GV L K
Sbjct: 205 --------------ISNINEAIQSLFTGDVRAIIYTKGAEGVELYLK 237
>gi|167906126|ref|ZP_02493331.1| ribokinase [Burkholderia pseudomallei NCTC 13177]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ ++ + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIAIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGMPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|422810360|ref|ZP_16858771.1| pseudouridine kinase [Listeria monocytogenes FSL J1-208]
gi|378752024|gb|EHY62612.1| pseudouridine kinase [Listeria monocytogenes FSL J1-208]
Length = 372
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+IP+ PVS K + + ++T + N DE S ++ I+ +
Sbjct: 218 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLDMTIESD------ 263
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
+ + A L+ G++ V++T GS G + +K
Sbjct: 264 --EDWRLAAQKWLDLGVKNVIVTNGSKGAVAANK 295
>gi|126458141|ref|YP_001075218.1| ribokinase [Burkholderia pseudomallei 1106a]
gi|167849183|ref|ZP_02474691.1| ribokinase [Burkholderia pseudomallei B7210]
gi|242313119|ref|ZP_04812136.1| ribokinase [Burkholderia pseudomallei 1106b]
gi|254192865|ref|ZP_04899300.1| ribokinase [Burkholderia pseudomallei S13]
gi|403522482|ref|YP_006658051.1| ribokinase [Burkholderia pseudomallei BPC006]
gi|126231909|gb|ABN95322.1| ribokinase [Burkholderia pseudomallei 1106a]
gi|169649619|gb|EDS82312.1| ribokinase [Burkholderia pseudomallei S13]
gi|242136358|gb|EES22761.1| ribokinase [Burkholderia pseudomallei 1106b]
gi|403077549|gb|AFR19128.1| ribokinase [Burkholderia pseudomallei BPC006]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ + + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIDIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 HGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|443697228|gb|ELT97763.1| hypothetical protein CAPTEDRAFT_20019 [Capitella teleta]
Length = 308
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N ++LG+K MI +G D G L++++ G++ E T V +
Sbjct: 37 GGKGANQCVMAARLGAKTSMIGKVGEDDFGRGYLKNFEDNGVNIEHTEMTSAAATGVAT- 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ VN + A+ V+ LT + IS A VL+ +SP A+ K+A +
Sbjct: 96 -IAVNDDGQNAIIIVKGANDTLTEQDVANSEDVISKAKVLICQLEISPHISLAAIKLARK 154
Query: 126 CNIPVWFEPVS--VTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ P + S+ Y PNE E A LSG S
Sbjct: 155 HGVVTILNPAPAVLNLDPSFYSMCDYFC---PNETE----AEILSG-----------LSV 196
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+S+ + + A+L LL+KG R VVLTLG G + S++
Sbjct: 197 KSVPEAMTAALL-LLDKGCRTVVLTLGEQGAVCVSQD 232
>gi|51891909|ref|YP_074600.1| ribokinase [Symbiobacterium thermophilum IAM 14863]
gi|51855598|dbj|BAD39756.1| ribokinase [Symbiobacterium thermophilum IAM 14863]
Length = 312
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++L + M+ +G D G+ LLE ++ G++TEGI R T
Sbjct: 39 GGKGANQAVAAARLSAPVAMVGRVGQDAFGDRLLESLRADGVATEGISRSATAGTGTAVI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
++ G+ V S + E +TP+ + I+SAS L++ + A + ++AA
Sbjct: 99 TVEATGQNRIVVVSGANAE--VTPELVEAHGPLIASASALLLQLEVPVEACVRAAELAAA 156
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV +P + + +++PNE E A AL+G P+ + AE
Sbjct: 157 AGVPVILDPAPAPAEPLPEPLRRNTWLITPNETE----AAALTGV----PVA-GRCGAEE 207
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
A VL +G R V++ LGS+G L
Sbjct: 208 -------AARVLWAQGFRQVLIKLGSEGAYL 231
>gi|239628068|ref|ZP_04671099.1| ribokinase [Clostridiales bacterium 1_7_47_FAA]
gi|239518214|gb|EEQ58080.1| ribokinase [Clostridiales bacterium 1_7_47FAA]
Length = 319
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
YV GG N A S G+ Y++ +G D G L++ + AG+ T + R + T
Sbjct: 39 EYVTGGKGSNQAYAASMQGADAYLVGRIGTDDNGRALMKQLEEAGVDTSFVVRDEGHLTG 98
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPP--ALAAS 119
+ + +D +G + AS + P+ + + + + V+M L P + +
Sbjct: 99 LSTMNIDADGNYFSIFAS--GANDHIKPEDVERAMDQVDFDMVVM---QLEMPLETVYQT 153
Query: 120 CKIAAECNIPVWFE---PVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
+A + IPV+ + +S+ R ++ I ++SPNE E A+ +
Sbjct: 154 YGMARQREIPVFLDAGPAMSIPLER-----LRGIFIISPNEAETAALTGIVP-------- 200
Query: 177 DRNKHSAES---LFQTLKPAILVLLEKGIRLVVLTLGSDGVLL 216
D H+ E+ L++ P R V+L LGS G LL
Sbjct: 201 DTKAHTEEAARWLYEKAAP----------RYVLLKLGSRGALL 233
>gi|126445411|ref|YP_001062254.1| ribokinase [Burkholderia pseudomallei 668]
gi|126224902|gb|ABN88407.1| ribokinase [Burkholderia pseudomallei 668]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ + + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIDIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 HGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|311747548|ref|ZP_07721333.1| ribokinase [Algoriphagus sp. PR1]
gi|311302679|gb|EAZ79840.2| ribokinase [Algoriphagus sp. PR1]
Length = 309
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 66/298 (22%)
Query: 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTA 61
N V GG N A + G I+ +G D+ G + +H+ G +++ I ++ T
Sbjct: 33 NMVFGGKGANQAVASKRCGGHVSFIAKVGNDIFGENMKKHFLKEGFNSDHILTDEEEATG 92
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
+ + GE + AVA +++ L P+ + +I I A V+++ +
Sbjct: 93 IAQIFVSEKGENSIAVAPGANMK--LIPEDLEAYIELIKEAHVILLQLESPIETVEYIAD 150
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ + + P K S+++ + +++PNE E A+ L+G ++ I +
Sbjct: 151 LVFQSGTKLILNPAPAQKLSE--SLLEKVWLLTPNETE----ASLLTGIDVIDQISA-QQ 203
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+AE LL+ G++ V++TLG +G LL + E +
Sbjct: 204 AAEH-----------LLKMGVKNVIITLGENGSLLSNPETVE------------------ 234
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
HFPA + T AGD G ASI++G
Sbjct: 235 ----------------------------HFPAFKVTAKDTTAAGDVFNGTLAASITNG 264
>gi|374604058|ref|ZP_09677028.1| ribokinase [Paenibacillus dendritiformis C454]
gi|374390322|gb|EHQ61674.1| ribokinase [Paenibacillus dendritiformis C454]
Length = 307
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG + M LG D G +L + G++T+ I + T + S
Sbjct: 37 GGKGANQAVAAARLGGRVTMAGMLGRDEFGREMLAVMQREGINTDHILFSESDPTGIGSI 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHIS----SASVLMVDANLSPPALAASCK 121
+L+ NGE V ++ + Q +H I SAS+L++ + P +
Sbjct: 97 VLEANGENRIVVVPGANLR------YSGQELHGIEDLIRSASILVIQLEMDPGMTEEAVA 150
Query: 122 IAAECNIPVWFEPVSVTKSRRIT-SVVKYITVVSPNEDELVAMANALSGENMFRPIDRNK 180
+A+ +PV P +R ++ S+++ +T ++PNE E A L+G
Sbjct: 151 LASRYRVPVLLNP---APARPLSGSLLRQVTYLTPNEAE----AELLTG----------- 192
Query: 181 HSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLC 217
+ + A LL G+R V++T+ G L+
Sbjct: 193 -IPATSIDGAQAAGRALLHAGVRHVIITMADKGALIV 228
>gi|417490645|ref|ZP_12172997.1| Fructokinase [Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|353630766|gb|EHC78222.1| Fructokinase [Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
Length = 316
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 62/294 (21%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG + NV C+++LG + I LG D AG L + ++ G+ +R D+ +AV+
Sbjct: 27 GGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVSSLRLDADLTSAVLIV 86
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHH--ISSASVLMVDANLSPPALAASCKIA 123
L +GE + + +++P + F + +S+ + D+ L + ++
Sbjct: 87 NLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDSPAREACLEGARRM- 145
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
E V F+ +K R T + EL+A + AL+ + + S
Sbjct: 146 REAGGYVLFDVNLRSKMWRNTDEIP----------ELIARSTALASICKVSADELCQLSG 195
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYK 243
S +Q + L + G +++LG+DG LL + E
Sbjct: 196 ASHWQDAR---YYLRDLGCDTTIISLGADGALLITAE----------------------- 229
Query: 244 TVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS 297
+F HFPA VV TGAGD VGG L ++S
Sbjct: 230 --------------------GEF---HFPAPRVDVVDTTGAGDAFVGGLLFTLS 260
>gi|424824085|ref|ZP_18249098.1| PfkB family carbohydrate kinase [Listeria monocytogenes str. Scott
A]
gi|332312765|gb|EGJ25860.1| PfkB family carbohydrate kinase [Listeria monocytogenes str. Scott
A]
Length = 388
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 116 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 174
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 175 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 233
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 234 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 267
>gi|330818940|ref|YP_004385919.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
gi|329130076|gb|AEB74628.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
Length = 306
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 39/245 (15%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKD------- 57
GG N A ++LGSK IS +G D G L+++K+ ++ G+
Sbjct: 40 FGGKGANQAVAAARLGSKVSFISMVGNDAFGQQQLDNFKNNHINITGVGVGTKSSGAAPI 99
Query: 58 -IDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
+D + + IL + G A+ E LTP+ + ++ I + ++++ +
Sbjct: 100 FVDKSSDNRILIIKG------ANNE-----LTPEVLDKYADLIKNTKIIVLQQEIPLETN 148
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176
+ +A + +IP+ P K I V K + SPNE EL + + +
Sbjct: 149 YHAIDLANQYHIPILLNPAPANKDLDINHVTK-VDFFSPNETELATLTGMPTND------ 201
Query: 177 DRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK---ELLSSMRIGLRKTK 233
+K A +++ G++ +++TLGS GVL ++ +L+ ++++ T
Sbjct: 202 ----------MDEIKKAAHHMIKLGVKNMLITLGSKGVLWVNESTSQLIKAIKVNAVDTT 251
Query: 234 PYGFS 238
G S
Sbjct: 252 GAGDS 256
>gi|407796695|ref|ZP_11143647.1| hypothetical protein MJ3_07308 [Salimicrobium sp. MJ3]
gi|407018849|gb|EKE31569.1| hypothetical protein MJ3_07308 [Salimicrobium sp. MJ3]
Length = 316
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GGVARN+AE + ++G + +++ G D A + ++ S ++ + + D T +
Sbjct: 40 VGGVARNIAENLGRIGEEVVLLTTKGND-AEWLAIDKECSHYVNLDHVFEIPDASTGSYT 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+L+ +G L+ A A ++ ++ LT + I + + A+ ++ D N + A
Sbjct: 99 AVLESDGNLSCAYADMDVFDE-LTKEKITGELPVLEKAACIIADLNCPAETVKFLQSFAL 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
E +IP PVS K R+ S + + + N+DE + + ID +K E
Sbjct: 158 ENDIPFVIIPVSSPKMDRLPSDLTGVEWLIVNQDE--------TETTLGMKIDTDKDWKE 209
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVL 215
S+++ ++KG V++T G GV+
Sbjct: 210 SVYR--------WMDKGAAHVIVTGGERGVM 232
>gi|227508934|ref|ZP_03938983.1| PfkB family carbohydrate kinase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191611|gb|EEI71678.1| PfkB family carbohydrate kinase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 373
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE-GIRRQKDID 59
V + +GG+ RN++ + KLG Y IS G D+ G E +K + + I K +
Sbjct: 99 VFHAIGGLGRNISLNLRKLGVFNYFISVYGDDLGG----EQFKIDATNNDMDITYSKQLM 154
Query: 60 TAVVSNILDVNGELAAAVASVES--IEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
S+ + +N ++ I + +TP++++ I ++ ++VD NL +
Sbjct: 155 NRKTSSYIYLNQPTGERFVGLDDMGINEMITPEFLKPREDVIQGSTEVVVDTNLPENTIR 214
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPID 177
C+ N PV+ + VS++K+ R+ S + I + N E A LSG +P D
Sbjct: 215 WICQ---NFNGPVFAKAVSLSKTERLRSNLHLIDTLVINGIE----APILSG---IQPTD 264
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ QT LL G++ V L + S G+L +K+
Sbjct: 265 K---------QTAIDCSTKLLRLGVKNVFLYIDSVGMLYQNKD 298
>gi|53721880|ref|YP_110865.1| ribokinase [Burkholderia pseudomallei K96243]
gi|167742157|ref|ZP_02414931.1| ribokinase [Burkholderia pseudomallei 14]
gi|167819338|ref|ZP_02451018.1| ribokinase [Burkholderia pseudomallei 91]
gi|167897780|ref|ZP_02485182.1| ribokinase [Burkholderia pseudomallei 7894]
gi|167914444|ref|ZP_02501535.1| ribokinase [Burkholderia pseudomallei 112]
gi|217418985|ref|ZP_03450492.1| ribokinase [Burkholderia pseudomallei 576]
gi|254189936|ref|ZP_04896445.1| ribokinase [Burkholderia pseudomallei Pasteur 52237]
gi|254262893|ref|ZP_04953758.1| ribokinase [Burkholderia pseudomallei 1710a]
gi|254300205|ref|ZP_04967651.1| ribokinase [Burkholderia pseudomallei 406e]
gi|386864640|ref|YP_006277588.1| ribokinase [Burkholderia pseudomallei 1026b]
gi|418395911|ref|ZP_12969814.1| ribokinase [Burkholderia pseudomallei 354a]
gi|418535771|ref|ZP_13101508.1| ribokinase [Burkholderia pseudomallei 1026a]
gi|418555622|ref|ZP_13120312.1| ribokinase [Burkholderia pseudomallei 354e]
gi|52212294|emb|CAH38316.1| putative ribokinase [Burkholderia pseudomallei K96243]
gi|157809985|gb|EDO87155.1| ribokinase [Burkholderia pseudomallei 406e]
gi|157937613|gb|EDO93283.1| ribokinase [Burkholderia pseudomallei Pasteur 52237]
gi|217398289|gb|EEC38304.1| ribokinase [Burkholderia pseudomallei 576]
gi|254213895|gb|EET03280.1| ribokinase [Burkholderia pseudomallei 1710a]
gi|385354492|gb|EIF60756.1| ribokinase [Burkholderia pseudomallei 1026a]
gi|385368307|gb|EIF73764.1| ribokinase [Burkholderia pseudomallei 354e]
gi|385373262|gb|EIF78315.1| ribokinase [Burkholderia pseudomallei 354a]
gi|385661768|gb|AFI69190.1| ribokinase [Burkholderia pseudomallei 1026b]
Length = 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A SKLG++ MIS LG D+ L +++ G+ TE +RR + + V
Sbjct: 38 GGKGANQAVAASKLGARVAMISKLGDDLFAENTLRNFERFGVDTEHVRRVSGVSSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V+ + + V+ + L P I I ++ ++++ + + + AA
Sbjct: 97 -IFVSPDSRNRILIVKGANRHLRPADIDAAAAKIEASRLVVLQLEIDIDTVYYAIDFAAA 155
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IPV P + K + + PNE EL +SG P D + +A S
Sbjct: 156 RGIPVLLNPAPGVPDLDFARLAK-LEFLVPNETELA----LVSGMPTDTP-DAVERAAGS 209
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
L+E+G++ V++TLG G LL S+
Sbjct: 210 -----------LVERGVKHVIVTLGEKGSLLVSR 232
>gi|197295435|ref|YP_002153976.1| putative ribokinase [Burkholderia cenocepacia J2315]
gi|444363936|ref|ZP_21164300.1| ribokinase [Burkholderia cenocepacia BC7]
gi|444366117|ref|ZP_21166207.1| ribokinase [Burkholderia cenocepacia K56-2Valvano]
gi|195944914|emb|CAR57526.1| putative ribokinase [Burkholderia cenocepacia J2315]
gi|443593921|gb|ELT62617.1| ribokinase [Burkholderia cenocepacia BC7]
gi|443605066|gb|ELT72943.1| ribokinase [Burkholderia cenocepacia K56-2Valvano]
Length = 308
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ M++ +G D+ + + +++ G+ T +R+ + + V
Sbjct: 38 GGKGANQAVAAARLGARVVMVTKVGDDVFADNTIRNFEREGIDTTHVRKVAGVPSGVAP- 96
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + + ++ V+ + L P I ++ +++++ + + + + A
Sbjct: 97 -IFVEPDSSNSILIVKGANRHLRPADIDAAAPMLAECALIVLQLEIELDTVYHAIEFGAR 155
Query: 126 CNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P V+ RI SV ++ PNE EL ++ P+D + +
Sbjct: 156 HGIPVLLNPAPAVADLDFERIRSVEFFV----PNETELAIVSGM--------PVDSRESA 203
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE---LLSSMRIGLRKTKPYGFSR 239
A L+ +G++ V++TLGS+G LL S++ + + + R T G
Sbjct: 204 TR--------AAEALVARGLKHVLVTLGSNGSLLVSRDGVRHVPGVPVDARDTTGAG--- 252
Query: 240 DLYKTVTSRCHSS 252
D Y +RC+++
Sbjct: 253 DAYIGCFARCYAA 265
>gi|159184960|ref|NP_354856.2| carbohydrate kinase [Agrobacterium fabrum str. C58]
gi|159140238|gb|AAK87641.2| carbohydrate kinase [Agrobacterium fabrum str. C58]
Length = 297
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +S+LG + +I+ G D+ G ++ E + AG+ D T +
Sbjct: 21 GGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFL-DRRTPSYTA 79
Query: 66 ILDVNGELAAAVASVESIEKFLTPDW--IRQFIHHISSASVLMVDANLSPPALAASCKIA 123
IL+ +G L A+A ++ + K TP +R I ++ L+ DANL L A IA
Sbjct: 80 ILERDGNLVIALADMD-LYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIA 138
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGEN 171
C P+ +S K+ ++ + + I ++ NE E A AL+GE
Sbjct: 139 RACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAE----ARALTGET 182
>gi|51245826|ref|YP_065710.1| ribokinase [Desulfotalea psychrophila LSv54]
gi|50876863|emb|CAG36703.1| related to ribokinase [Desulfotalea psychrophila LSv54]
Length = 309
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A +KLG + M+S +G D+ G ++ + G+ + I + V
Sbjct: 40 FGGKGANQAIAAAKLGGEVLMLSKVGDDVFGPNTRANFVANGIDARYVETAAGISSGVAP 99
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
+D G+ ++ V+ K L+P + + I I + ++++ +S + ++
Sbjct: 100 IFVDAKGQ--NSILIVKGANKHLSPVDVDRAIDDIRACDLIVMQLEISLETVYYVIELGL 157
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+IPV P + + + + ++ PNE EL L+G P+
Sbjct: 158 REHIPVLLNPAPAVAGLDMEKICQ-LDMLVPNETEL----EILTG----MPV-------- 200
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
+ ++ A L++ GI+ V++T+GS G LL +++ ++S+
Sbjct: 201 QTLEQIQAAAKFLIDAGIKKVIVTMGSKGALLVTEKEMTSV 241
>gi|422416816|ref|ZP_16493773.1| carbohydrate kinase [Listeria innocua FSL J1-023]
gi|313622661|gb|EFR93028.1| carbohydrate kinase [Listeria innocua FSL J1-023]
Length = 388
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 116 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 174
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 175 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 233
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 234 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 267
>gi|242765259|ref|XP_002340938.1| IdgA domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724134|gb|EED23551.1| IdgA domain protein [Talaromyces stipitatus ATCC 10500]
Length = 659
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 59/341 (17%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQK---DIDTA 61
LGGV NVA S +GS S + D++G L + GL T GI+ + TA
Sbjct: 293 LGGVGYNVAIAASYVGSTTLFCSVVADDLSGKAALAAVEQEGLETTGIQTLSLSLGVRTA 352
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDW---IRQFIHHI---SSASVLMVDANLSPPA 115
+ D +L A+A + +E PD + F I + + ++VD N SP
Sbjct: 353 QYIAVNDAKKDLFVAMADMAIME---LPDHDLNMEGFWGAIVAQARPNWIVVDGNWSPAV 409
Query: 116 LAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-----------------ITVVSPNED 158
++ ++ + FEPVS K+ R+ + ++ + + +PNE
Sbjct: 410 ISKWIELGQTVGARIAFEPVSTAKATRLFAGLETNKSSCVIGPSDTVPRSKLDLAAPNEL 469
Query: 159 ELVAM-----ANAL--SGE--NMFRPIDRNKHSAESLFQTLKPAILV---LLEKGIRL-- 204
EL +M N L S E N+ ++ + + L ++ LV + ++ I+L
Sbjct: 470 ELRSMYSTARENGLFDSPEWWNIINELNLSSAGSRDLLVSVTSPSLVDAGIPQQSIQLLP 529
Query: 205 ----VVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEP 260
+++ LG GVLL +LL R R T P D + SR +S +G E
Sbjct: 530 FIPNLLIKLGPQGVLLT--QLLP--REDARLTSP-----DCSPYIISRSDASAGNGN-EM 579
Query: 261 AGG--SQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG 299
GG + F VV + GAGD L+G +A +S+G
Sbjct: 580 VGGVYMRLFPPETILADEDVVSVNGAGDTLLGVVVAGLSNG 620
>gi|325093097|gb|EGC46407.1| IdgA domain-containing protein [Ajellomyces capsulatus H88]
Length = 809
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSA--GLSTEGIRRQKDIDTAV 62
LGGV NVA + GS + S + D++G L K+ L +GI+ +
Sbjct: 437 LGGVGHNVALAANYAGSSVLLCSVVADDLSGRAALSGLKNCQPNLQVQGIQVLNPATGSR 496
Query: 63 VSNILDVNGELA------AAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPAL 116
S + VN E A +A +E+ E+ L D + + + S +++DAN SP +
Sbjct: 497 TSQYVSVNDERKNLMLAMADMAIMETPEQHLDFDTSWRPLIQSARPSWIVIDANWSPDVI 556
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRI--------TSVVK--------YITVVSPNEDEL 160
A +A + FEPVS KS R+ S+++ I +V+PN EL
Sbjct: 557 AKWISLAKSHGTKIAFEPVSNEKSTRLFTRSLSNSKSIIQPSITIPNHSIDLVTPNRHEL 616
Query: 161 VAMANALSGENMFR 174
AM +F
Sbjct: 617 TAMYTTARESGLFE 630
>gi|154505466|ref|ZP_02042204.1| hypothetical protein RUMGNA_03003 [Ruminococcus gnavus ATCC 29149]
gi|153794124|gb|EDN76544.1| putative ribokinase [Ruminococcus gnavus ATCC 29149]
Length = 632
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 23/215 (10%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A S+LG + +I +G D+ + + G+ T G++R DT
Sbjct: 359 GGKGINQAIGASRLGHRVTLIGNVGSDLDSDNIYRALNENGVETHGVKRCLQTDTGKAYI 418
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+D NG+ + ++ + TP I + H + ++ + + + +C++A +
Sbjct: 419 FVDSNGD--SMISILTGANGIFTPQDICEKEHLFENTGYCLIQSEIPLDTMREACRMAHK 476
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+ +P + + R ++ I ++ PNEDEL + +
Sbjct: 477 YHAKTIVKPSACSSMTR--EMLADIDIIIPNEDELFELCS-------------------K 515
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ +++ +LE GI V++TL G + +K+
Sbjct: 516 YYPSMEAQAASMLECGISAVIVTLREKGCYVKTKD 550
>gi|453084936|gb|EMF12980.1| IdgA domain protein [Mycosphaerella populorum SO2202]
Length = 761
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 135/351 (38%), Gaps = 70/351 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIR---RQKDIDTA 61
LGGV NVA +G+ + SA+G D+ G LE +A +ST+GI TA
Sbjct: 380 LGGVGHNVARAAHLMGATVRLCSAIGDDLTGKAALEALSAAKMSTKGISVLPTDSGSRTA 439
Query: 62 VVSNILDVNGELAAAVASVESIE------KFLTPDWIRQFIHHISSA--SVLMVDANLSP 113
+ D + +L A+A + +E LT + ++ + SA S +++D N SP
Sbjct: 440 QYIAVNDTSKDLVVAMADMSILETPSDSSSTLTETFHNFWLPQLESARPSHVVLDGNWSP 499
Query: 114 PALAASCKIAAECNIPVWFEPVSVTKSRRI------------------------TSVVKY 149
L+ + A + + + FEPVS KS I T
Sbjct: 500 EYLSLWLQAANKIHAHITFEPVSNIKSTGIFHLPSSPSPTSSSSSSSSPSYKLGTFPHNS 559
Query: 150 ITVVSPNEDELVAMANALSGENMFRP-----------IDRNKHSAESLFQTLK------- 191
I + +PN EL AM + +F I + A+ F T K
Sbjct: 560 IHLTTPNAYELNAMYTSGRESGLFSTPHWWSIIDALGIPHSGARAQLTFATSKRLVDEGI 619
Query: 192 PAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHS 251
P + L I V LGS+GVLL R+ + P+ + +RC
Sbjct: 620 PQQSIQLLPYIPTVCCKLGSEGVLLTQILPAGDERLNHPEYAPH---------ILARC-- 668
Query: 252 SRYSGAMEPAGGSQFFAVHFPA----LPASVVRLTGAGDCLVGGTLASISS 298
+G + G + FPA VV + G GD VG +A +++
Sbjct: 669 --TNGTEDSVGVGGVYMRLFPAVEEVEGEHVVSVNGVGDTFVGTIVAGLAA 717
>gi|423099257|ref|ZP_17086965.1| kinase, PfkB family [Listeria innocua ATCC 33091]
gi|370794492|gb|EHN62267.1| kinase, PfkB family [Listeria innocua ATCC 33091]
Length = 388
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 116 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 174
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 175 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 233
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 234 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 267
>gi|426335124|ref|XP_004029083.1| PREDICTED: ribokinase isoform 1 [Gorilla gorilla gorilla]
Length = 322
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + I+ A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVINRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTK--SRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
+ F P R ++ V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYTLSD---VFCCNESE----AEILTGLTVGSAADAGE-- 219
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 ----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|149178299|ref|ZP_01856891.1| ribokinase [Planctomyces maris DSM 8797]
gi|148842825|gb|EDL57196.1| ribokinase [Planctomyces maris DSM 8797]
Length = 317
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A +++G++ MI +G D LL++ K+ G++T + R+ D + V
Sbjct: 43 GGKGANQAVAAARMGAEVTMIGCVGDDSFAEELLQNLKAEGINTRYVTRKTDTTSGVAVV 102
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+++++GE A+ V + + Q I + VL++ + + A+ KIA E
Sbjct: 103 MVEMSGE--NAILVVPGANGLVGLAELEQARQVICESDVLLMQLEVPVETVIAAAKIARE 160
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
+PV + + + ++K + ++ PN+ E A AL+G +P+ +
Sbjct: 161 AGVPVILD-PAPAPAGFPAELLK-VDLICPNQSE----AAALTG----KPL--------T 202
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
+ + AI L+E+G R +++T+ G +L E
Sbjct: 203 SLEDVVAAIPALVEQGPRQILVTMADQGAVLFDGE 237
>gi|89068224|ref|ZP_01155634.1| kinase, pfkB family protein [Oceanicola granulosus HTCC2516]
gi|89046141|gb|EAR52199.1| kinase, pfkB family protein [Oceanicola granulosus HTCC2516]
Length = 297
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ V GGVA N+A +++ G +P +++ALG D AG+ LL ++ G+ R +D+ T
Sbjct: 35 ITRVPGGVALNIAMTLTRFGLRPALLAALGRDAAGDALLAEAEAMGMEVAHAYRSEDLPT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEK 85
I NG L AA+A S+E+
Sbjct: 95 DNYMAIEGANG-LIAAIADAHSLER 118
>gi|220931303|ref|YP_002508211.1| Ribokinase [Halothermothrix orenii H 168]
gi|219992613|gb|ACL69216.1| Ribokinase [Halothermothrix orenii H 168]
Length = 306
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKDIDTAV 62
V GG N A KLG + I + G D G LL + K+ G+ + I R +K+ A+
Sbjct: 37 VPGGKGANQALTAGKLGGQVRFIGSCGKDEYGTTLLNNLKNGGVIVDDILRVEKNTGIAM 96
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
++ + E + + V+ +++TPD + + AS+L++ + ++ + ++
Sbjct: 97 IT----IEKEGSNRIIYVKGANEYVTPDVVMKMEDRFKKASILLIQMEIPLESVIKAVEL 152
Query: 123 AAECNIPVWFEPVSVTK-SRRITSVVKYITVVSPNE---DELVAMANALSGENMFRPIDR 178
A + + V +P V +I ++ YI PNE DELV + E +
Sbjct: 153 AKKYQMKVILDPSPVQGLPEKIFPLIDYIL---PNEIELDELVKNGCQIEEE-------K 202
Query: 179 NKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
KH LL+ G V++T G +GV
Sbjct: 203 AKH---------------LLKLGTNNVIVTKGKNGV 223
>gi|254250763|ref|ZP_04944082.1| Carbohydrate kinase, PfkB [Burkholderia cenocepacia PC184]
gi|124879897|gb|EAY67253.1| Carbohydrate kinase, PfkB [Burkholderia cenocepacia PC184]
Length = 328
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 113/253 (44%), Gaps = 31/253 (12%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++LG++ M++ +G D+ + + +++ G+ T +R+ + + V
Sbjct: 58 GGKGANQAVAAARLGARVVMVTKVGDDVFADNTIRNFEREGIDTTHVRKVAGVPSGVAP- 116
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+ V + + ++ V+ + L P I ++ +++++ + + + A
Sbjct: 117 -IFVEPDSSNSILIVKGANRHLQPADIDAAAPMLAECALIVLQLEIELDTVYHAIDFGAR 175
Query: 126 CNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
IPV P V+ RI SV ++ PNE EL ++ P+D + +
Sbjct: 176 LGIPVLLNPAPAVADLDFERIRSVEFFV----PNETELAIVSGM--------PVDSRESA 223
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE---LLSSMRIGLRKTKPYGFSR 239
A L+ +G++ V++TLGS+G LL S++ + + + R T G
Sbjct: 224 TR--------AAEALVARGLKHVLVTLGSNGSLLVSRDGVHHVPGVPVDARDTTGAG--- 272
Query: 240 DLYKTVTSRCHSS 252
D Y +RC+++
Sbjct: 273 DAYIGCFARCYAA 285
>gi|46908511|ref|YP_014900.1| carbohydrate kinase [Listeria monocytogenes serotype 4b str. F2365]
gi|47092439|ref|ZP_00230229.1| carbohydrate kinase, PfkB family [Listeria monocytogenes str. 4b
H7858]
gi|226224886|ref|YP_002758993.1| carbohydrate kinase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254825084|ref|ZP_05230085.1| carbohydrate kinase [Listeria monocytogenes FSL J1-194]
gi|254854293|ref|ZP_05243641.1| carbohydrate kinase [Listeria monocytogenes FSL R2-503]
gi|254933331|ref|ZP_05266690.1| carbohydrate kinase [Listeria monocytogenes HPB2262]
gi|254992011|ref|ZP_05274201.1| carbohydrate kinase [Listeria monocytogenes FSL J2-064]
gi|255521705|ref|ZP_05388942.1| carbohydrate kinase [Listeria monocytogenes FSL J1-175]
gi|300763911|ref|ZP_07073907.1| PfkB family carbohydrate kinase [Listeria monocytogenes FSL N1-017]
gi|386733025|ref|YP_006206521.1| carbohydrate kinase [Listeria monocytogenes 07PF0776]
gi|404281897|ref|YP_006682795.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2755]
gi|404287710|ref|YP_006694296.1| PfkB family carbohydrate kinase [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|405750675|ref|YP_006674141.1| PfkB family carbohydrate kinase [Listeria monocytogenes ATCC 19117]
gi|405753549|ref|YP_006677014.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2378]
gi|406705071|ref|YP_006755425.1| carbohydrate kinase, PfkB family [Listeria monocytogenes L312]
gi|417316133|ref|ZP_12102787.1| carbohydrate kinase [Listeria monocytogenes J1816]
gi|417318331|ref|ZP_12104919.1| carbohydrate kinase [Listeria monocytogenes J1-220]
gi|46881783|gb|AAT05077.1| carbohydrate kinase, PfkB family [Listeria monocytogenes serotype
4b str. F2365]
gi|47019216|gb|EAL09959.1| carbohydrate kinase, PfkB family [Listeria monocytogenes serotype
4b str. H7858]
gi|225877348|emb|CAS06062.1| Putative carbohydrate kinase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258607685|gb|EEW20293.1| carbohydrate kinase [Listeria monocytogenes FSL R2-503]
gi|293584892|gb|EFF96924.1| carbohydrate kinase [Listeria monocytogenes HPB2262]
gi|293594327|gb|EFG02088.1| carbohydrate kinase [Listeria monocytogenes FSL J1-194]
gi|300515252|gb|EFK42303.1| PfkB family carbohydrate kinase [Listeria monocytogenes FSL N1-017]
gi|328465376|gb|EGF36623.1| carbohydrate kinase [Listeria monocytogenes J1816]
gi|328471561|gb|EGF42441.1| carbohydrate kinase [Listeria monocytogenes J1-220]
gi|384391783|gb|AFH80853.1| carbohydrate kinase [Listeria monocytogenes 07PF0776]
gi|404219875|emb|CBY71239.1| carbohydrate kinase, PfkB family [Listeria monocytogenes ATCC
19117]
gi|404222749|emb|CBY74112.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2378]
gi|404228532|emb|CBY49937.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2755]
gi|404246639|emb|CBY04864.1| carbohydrate kinase, PfkB family [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406362101|emb|CBY68374.1| carbohydrate kinase, PfkB family [Listeria monocytogenes L312]
Length = 372
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 218 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 251
>gi|194374991|dbj|BAG62608.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|24372399|ref|NP_716441.1| ribokinase RbsK [Shewanella oneidensis MR-1]
gi|24346362|gb|AAN53886.1| ribokinase RbsK [Shewanella oneidensis MR-1]
Length = 303
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 6 GGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAV 62
GG N A ++L S+ I LG D GN + + W G+ EGI ++ T
Sbjct: 38 GGKGANQAVACARLCLPDSRVDFICHLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGT 97
Query: 63 VSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ NGE A +A+ + LTP + + ++A L++ ++ + ++
Sbjct: 98 AMIFVADNGENAIGIAAGAN--AHLTPLELEKHYALFANAQYLLIQLETPTETVSNALQM 155
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A I P +K++ +++PNE E A AL+G + KH
Sbjct: 156 AKRLGITTVLNPAPAATQE--LDYLKWVDIITPNETE----AEALTGIEV-------KHE 202
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCS 218
++ K A L ++GI VV+TLGS G + S
Sbjct: 203 EDA-----KLAAQWLHQQGITTVVITLGSKGAFISS 233
>gi|254442633|ref|ZP_05056109.1| kinase, pfkB family [Verrucomicrobiae bacterium DG1235]
gi|198256941|gb|EDY81249.1| kinase, pfkB family [Verrucomicrobiae bacterium DG1235]
Length = 325
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 107/295 (36%), Gaps = 55/295 (18%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG N A ++G++ I ALG D+ + KS GL TE + I + S
Sbjct: 37 GGKGFNQAIASVRVGAETLFIGALGDDVFSDSARMFAKSEGLETE-FETMEGISSGAASI 95
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D G+ VA L+P+WI + A V++ + PA+ + + +
Sbjct: 96 IVDEVGDNQIVVAL--GANGLLSPEWIDRCEGRFREAKVVLCQLEANLPAMQRALEQGRK 153
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG----ENMFRPIDRNKH 181
+ + S +++ TVV+PNE E ++G + FR D H
Sbjct: 154 ADALTILNLAPINDSFD-PAMLDLATVVTPNETEFAYTYEKVTGIRLQADFFRSSDAELH 212
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+ + E G+ +VV+TLG DG + + + L P GF R
Sbjct: 213 A-------------LCREIGVPVVVITLGDDGSFISVADGALPGNLSL----PGGFCR-- 253
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI 296
F + V TGAGD GG A I
Sbjct: 254 ----------------------------RFQCIEVQVKDTTGAGDAFSGGLAAGI 280
>gi|403301838|ref|XP_003941584.1| PREDICTED: ribokinase isoform 2 [Saimiri boliviensis boliviensis]
Length = 286
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 25/232 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAKTSLVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAASIISRAKVMVCQLEINPATSLEALTMAR 168
Query: 125 ECNIPVWFEP---VSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
+ F P ++ R T V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLDPRFYT----LSNVFCCNESE----AEILTGLTVGSAADAGE- 219
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 -----------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>gi|116873709|ref|YP_850490.1| indigoidine synthase A-like protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742587|emb|CAK21711.1| indigoidine synthase A-like protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 372
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLDYLGNFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAES 185
IP+ PVS K + + ++T + N DE S ++ I K+ +
Sbjct: 218 NTIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE--------SETHLGLTI---KNDEDW 266
Query: 186 LFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
T K L+ G++ V++T GS G + +K
Sbjct: 267 RLATQK-----WLDLGVKNVIVTNGSKGAVAANK 295
>gi|405756455|ref|YP_006679919.1| PfkB family carbohydrate kinase [Listeria monocytogenes SLCC2540]
gi|404225655|emb|CBY77017.1| carbohydrate kinase, PfkB family [Listeria monocytogenes SLCC2540]
Length = 372
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGVARNV E + +LG + +++A G D +++ + ++ + + I T +
Sbjct: 100 GGVARNVGENLGRLGKEVILLTACGTDSDWEA-VKNASNTYMNLDYVTAFPSIATGSYTA 158
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
+L+ NG+L A+A +++ + LTPD + + +S AS ++ D N L A
Sbjct: 159 VLENNGDLLVALADMDAYD-HLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEI 217
Query: 126 CNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ PVS K + + ++T + N DE
Sbjct: 218 NSIPLVLVPVSSPKMSHLPERLDHVTWLICNRDE 251
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,718,193,416
Number of Sequences: 23463169
Number of extensions: 182663842
Number of successful extensions: 496846
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 2496
Number of HSP's that attempted gapping in prelim test: 490615
Number of HSP's gapped (non-prelim): 6586
length of query: 327
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 185
effective length of database: 9,027,425,369
effective search space: 1670073693265
effective search space used: 1670073693265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)