BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036840
(327 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P30235|PSUK_ECOLI Pseudouridine kinase OS=Escherichia coli (strain K12) GN=psuK PE=1
SV=2
Length = 313
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 1 VNYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDT 60
+ + GGV RN+A+ ++ LG+K +++SA+G D G LL +G+ + +T
Sbjct: 35 IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENT 94
Query: 61 AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASC 120
+ ++LD GE+ A+ + +I +T +++ Q I A V++ D N+S ALA
Sbjct: 95 SSYLSLLDNTGEMLVAINDM-NISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWIL 153
Query: 121 KIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMAN-ALSGENMFRPIDRN 179
AA N+PV+ +PVS K ++ + I + PN E ++ ALSG +
Sbjct: 154 DNAA--NVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAW 211
Query: 180 KHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
H + G+ +VL++G DGV
Sbjct: 212 FH-----------------QHGLNRLVLSMGGDGV 229
>sp|P33020|YEII_ECOLI Uncharacterized sugar kinase YeiI OS=Escherichia coli (strain K12)
GN=yeiI PE=3 SV=2
Length = 362
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GGV RN+A ++ LG +++S +G D G +LLE + AG++ G R T+
Sbjct: 93 GGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLA 152
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI---RQFIHHISSASVLMVDANLSPPALAASCKI 122
I + + + A+ +E+ LTP + R + H A V++ D NL+ AL +
Sbjct: 153 IANRDDQTVLAINDTHLLEQ-LTPQLLNGSRDLLRH---AGVVLADCNLTAEALEWVFTL 208
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
A E IPV+ + VS K+ +I + +I + P EL L G+ + DRN
Sbjct: 209 ADE--IPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPEL----EILWGQAITSDADRNT-- 260
Query: 183 AESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE 220
A+ L ++G++ + + L + V K+
Sbjct: 261 ----------AVNALHQQGVQQLFVYLPDESVYCSEKD 288
>sp|Q8R1Q9|RBSK_MOUSE Ribokinase OS=Mus musculus GN=Rbks PE=1 SV=1
Length = 323
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+K ++ +G D GN +E+ K +STE + +D T S
Sbjct: 52 FGGKGANQCVQAARLGAKAAIVCKVGNDSFGNDYIENLKQNHISTEFTYQTRDAATGTAS 111
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V FL + +++ IS A V++ +SP A + +A
Sbjct: 112 II--VNNEGQNIIVIVAGANLFLNSEDLKKAASVISRAKVMICQLEISPAASLEALTMAR 169
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P ++ NE E A L+G + P K
Sbjct: 170 RSGVKTLFNPAPAMADLD-PQFYTLSSIFCCNESE----AEILTGHAVSDPTTAGK---- 220
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
A ++LLE+G ++VV+TLG+ G ++ S+
Sbjct: 221 --------AAMILLERGCQVVVITLGASGCVILSQ 247
>sp|Q9H477|RBSK_HUMAN Ribokinase OS=Homo sapiens GN=RBKS PE=1 SV=1
Length = 322
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 19/229 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N ++LG+ M+ +G D GN +E+ K +STE + KD T S
Sbjct: 51 FGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTAS 110
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I VN E + V L + +R + IS A V++ ++P + +A
Sbjct: 111 II--VNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMAR 168
Query: 125 ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
+ F P V NE E A L+G + D +
Sbjct: 169 RSGVKTLFNPAPAIADLD-PQFYTLSDVFCCNESE----AEILTGLTVGSAADAGE---- 219
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
A LVLL++G ++V++TLG++G ++ S+ I K K
Sbjct: 220 --------AALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVK 260
>sp|Q54UQ4|RBSK_DICDI Probable ribokinase OS=Dictyostelium discoideum GN=rbsk PE=3 SV=2
Length = 318
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 8/227 (3%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A N A S LGS +I+ LG D +G L+++K ++ E + ++ + +
Sbjct: 39 GGKAANQAVQASLLGSNCTLITKLGDDPSGVNTLKNFKDKNINCEFVSVVSNVPSGCATI 98
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAE 125
I+D NG+ + + L + I ++S+L+ +S + KIA E
Sbjct: 99 IVDKNGD--NNIIIIGGSNDLLNEKDVDNAKSQIQNSSLLLCQLEVSLNVTLHALKIAKE 156
Query: 126 CN-IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAE 184
N + I + K++ ++ NE EL+ + N+ N D N +
Sbjct: 157 SNKCKTMLNLTPINNDPLILEMFKFVDILIVNEIELIGLYNSTFNNNNNNEKDFNINQLM 216
Query: 185 SLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRK 231
+ L + +++TLG +G LL SKE + I L++
Sbjct: 217 EMCDNLIKKF-----ENFENIIVTLGGNGQLLVSKENNKNCHIELKE 258
>sp|P36945|RBSK_BACSU Ribokinase OS=Bacillus subtilis (strain 168) GN=rbsK PE=3 SV=2
Length = 293
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 68/156 (43%), Gaps = 5/156 (3%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG++ +M+ +G D G +L + K+ G+ T+ + ++
Sbjct: 36 VPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAILNNLKANGVRTDYMEPVTHTESGTA 95
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIA 123
+L E ++ V+ +TP + + I ++++ + + CK
Sbjct: 96 HIVL---AEGDNSIVVVKGANDDITPAYALNALEQIEKVDMVLIQQEIPEETVDEVCKYC 152
Query: 124 AECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
+IP+ P ++ T + + T ++PNE E
Sbjct: 153 HSHDIPIILNPAPARPLKQET--IDHATYLTPNEHE 186
>sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2
Length = 328
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +++LG K + LG D G++L K+ G+ EGI K TA+
Sbjct: 42 GGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQAEGINFDKGARTALAFV 101
Query: 66 ILDVNGELAAAVASVESIEKFLTP-----DWIRQF-IHHISSASVLMVDANLSPPALAAS 119
L +GE S + LTP D IR + H S S+++ P AA
Sbjct: 102 TLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGSISLIV------EPCRAAH 155
Query: 120 CK---IAAECN----------IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
K +A E +P+W P + ++I S+ V+ ++ EL
Sbjct: 156 MKAMEVAKEAGALLSYDPNLRLPLW--PSAEEAKKQIKSIWDSADVIKVSDVEL----EF 209
Query: 167 LSGENMFRPIDRNKHSAESLFQ-TLKPAILVLLEKG 201
L+G N + SA SL+ LK ++ L EKG
Sbjct: 210 LTGSNKI-----DDESAMSLWHPNLKLLLVTLGEKG 240
>sp|Q9USY1|YOW5_SCHPO Pseudouridine-metabolizing bifunctional protein C1861.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1861.05 PE=3 SV=1
Length = 747
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 123/306 (40%), Gaps = 30/306 (9%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GGVA N+A S +G+ ++S +G ++ + + I + + + +
Sbjct: 428 FGGVAHNMALASSLMGASTKLVSCVGTKSVPTSSIKEYLTKSSLQHTIVEKSNFTSCSYT 487
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
I D NG L A A + +E L+ I+ ++ A + D N+S P+L +
Sbjct: 488 AINDCNGNLLLAGADMAIMEN-LSYSEIKD---DLNDAKYICFDGNIS-PSLMLDITTSK 542
Query: 125 ECNIPVWFEPVSVTKSRRITSV--VKYITVVSPNEDELVAMANALSGENMFRPIDRNKHS 182
V FEP S K+ +I V V I ++PN+ EL + A+ N F
Sbjct: 543 SSKQRVVFEPTSGPKTLKILKVLSVASIDFITPNKFELDVLFQAMKDGNFFE-------- 594
Query: 183 AESLFQTLKP-AILVLLEKGIRLVVLTLG-----SDGVLLCSKELLSSMRIGLRKTKPYG 236
ES +Q L I I + G +G+L LL ++ + K P G
Sbjct: 595 NESWWQKLNSFGITSSFYNEIERFTKSTGIEEITENGILQKCFHLLPFIKNIIVKLGPNG 654
Query: 237 ---FSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTL 293
S + + V S S G + +++ V P + A+ V +G GD +G
Sbjct: 655 ALLISSEKLQGVNSNSASLFTPGNVT----VKYYPV--PKVIATPVNASGTGDTFIGTFT 708
Query: 294 ASISSG 299
A +S G
Sbjct: 709 ALLSKG 714
>sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1
Length = 328
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +++LG + + LG D G++L K+ G+ +GI K TA+
Sbjct: 42 GGAPANVAIAVTRLGGRSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFV 101
Query: 66 ILDVNGELAAAVASVESIEKFLTP-----DWIRQF-IHHISSASVLMVDANLSPPALAAS 119
L +GE S + LTP D IR + H S S+++ P AA
Sbjct: 102 TLRADGEREFMFYRNPSADMLLTPAELNLDLIRSAKVFHYGSISLIV------EPCRAAH 155
Query: 120 CK---IAAECN----------IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
K +A E +P+W P + ++I S+ V+ ++ EL
Sbjct: 156 MKAMEVAKEAGALLSYDPNLRLPLW--PSAEEAKKQIKSIWDSADVIKVSDVEL----EF 209
Query: 167 LSGENMFRPIDRNKHSAESLFQ-TLKPAILVLLEKG 201
L+G N + SA SL+ LK ++ L EKG
Sbjct: 210 LTGSNKI-----DDESAMSLWHPNLKLLLVTLGEKG 240
>sp|Q9K6K1|RBSK_BACHD Ribokinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=rbsK PE=3 SV=1
Length = 294
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 4 VLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
V GG N A ++LG+ MI +G D G++L E+ G+ T+ ++ D + V
Sbjct: 38 VPGGKGANQAVAAARLGANVRMIGRVGDDPFGHVLTENLAKEGIITDSVKPVTDCTSGVA 97
Query: 64 SNIL-DVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKI 122
+ +L D + + + E + TPD++ F ++++ V+++ + +A +
Sbjct: 98 TILLSDRDNRIIVTKGANEHV----TPDYVAAFEQELAASDVVLLQLEIPLETVAYVLEF 153
Query: 123 AAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163
A+ ++ P K + T +SPNE+E + +
Sbjct: 154 CAKHHVTTVLNPAPAQKLPD--AAWTDATYISPNENECLQL 192
>sp|Q0J8G4|SCRK2_ORYSJ Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1
Length = 336
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 35/233 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +SKLG + G D G++L++ K G++ EG + TA+
Sbjct: 49 GGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFV 108
Query: 66 ILDVNGELAAAVASVESIEKFLTP-----DWIRQF-IHHISSASVLM-------VDANLS 112
L NGE S + LT D IR+ I H S S++ V A +
Sbjct: 109 TLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRA 168
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
+ C +P+W P I S+ K + ++DE+ +
Sbjct: 169 AKSAGILCSYDPNVRLPLW--PSEDAARAGILSIWKEADFIKVSDDEVAFLTQG------ 220
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
D N +L L G++L+++T G G +K+ S+
Sbjct: 221 ----DANDEK----------NVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSV 259
>sp|A2YQL4|SCRK2_ORYSI Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2
Length = 336
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 35/233 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +SKLG + G D G++L++ K G++ EG + TA+
Sbjct: 49 GGAPANVACAISKLGGSSAFVGKFGDDEFGHMLVDILKKNGVNAEGCLFDEHARTALAFV 108
Query: 66 ILDVNGELAAAVASVESIEKFLTP-----DWIRQF-IHHISSASVLM-------VDANLS 112
L NGE S + LT D IR+ I H S S++ V A +
Sbjct: 109 TLKSNGEREFMFYRNPSADMLLTEAELNLDLIRRAKIFHYGSISLITEPCRSAHVAAMRA 168
Query: 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
+ C +P+W P I S+ K + ++DE+ +
Sbjct: 169 AKSAGILCSYDPNVRLPLW--PSEDAARAGILSIWKEADFIKVSDDEVAFLTQG------ 220
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
D N +L L G++L+++T G G +K+ S+
Sbjct: 221 ----DANDEK----------NVLSLWFDGLKLLIVTDGEKGCRYFTKDFKGSV 259
>sp|P77493|YDJH_ECOLI Uncharacterized sugar kinase YdjH OS=Escherichia coli (strain K12)
GN=ydjH PE=1 SV=2
Length = 315
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG A N A +S+LG + ++S +G D AG +L+H + + + +++ IDT++
Sbjct: 41 GGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVG 100
Query: 66 ILDVNGE 72
++ +GE
Sbjct: 101 LVTEDGE 107
>sp|P37829|SCRK_SOLTU Fructokinase OS=Solanum tuberosum PE=2 SV=1
Length = 319
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +++LG K + LG D G++L K+ G+ +GI K TA+
Sbjct: 43 GGAPANVAIAVTRLGGKSAFVGKLGDDEFGHMLAGILKTNGVQADGINFDKGARTALAFV 102
Query: 66 ILDVNGELAAAVASVESIEKFLTP-----DWIRQF-IHHISSASVLMV---DANLSPPAL 116
L +GE S + LTP D IR + H S S+++ A+L +
Sbjct: 103 TLRADGEREFMFYRNPSADMLLTPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEV 162
Query: 117 A--ASCKIAAECN--IPVWFEPVSVTKSRRITSV-VKYITVVSPNEDE 159
A A ++ + N +P+W K+ +++ V ++++T +DE
Sbjct: 163 AKEAGALLSYDPNLRLPLWSSEAEARKAIKVSDVELEFLTGSDKIDDE 210
>sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2
SV=1
Length = 326
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +S+LG + + LG D G++L K G+S EGI TA+
Sbjct: 41 GGAPANVAIAISRLGGRAAFVGKLGDDEFGHMLAGILKQNGVSAEGINFDTGARTALAFV 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIR------QFIHHISSASVLMV---DANLSPPAL 116
L +GE S + L PD + + H S S+++ A+L +
Sbjct: 101 TLRSDGEREFMFYRNPSADMLLRPDELNLDVIRSAKVFHYGSISLIVEPCRSAHLKAMEV 160
Query: 117 A--ASCKIAAECN--IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
A A ++ + N +P+W P ++I S+ V+ +++EL+ L+G +
Sbjct: 161 AKEAGALLSYDPNLRLPLW--PSKEEAQKQILSIWDKAEVIKVSDEELM----FLTGSDK 214
Query: 173 FRPIDRNKHSAESLFQT-LKPAILVLLEKGIR 203
+ +A SL+ + LK ++ L EKG R
Sbjct: 215 V-----DDETALSLWHSNLKLLLVTLGEKGCR 241
>sp|P0A9J6|RBSK_ECOLI Ribokinase OS=Escherichia coli (strain K12) GN=rbsK PE=1 SV=1
Length = 309
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A + G+ I+ G D G + + + + + K T V
Sbjct: 40 FGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVA- 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ VNGE + L+P + I++AS L++ ++ A+ KIA
Sbjct: 99 -LIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAH 157
Query: 125 ECNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ V P +R + ++ + +++PNE E A L+G R ++ ++ +A
Sbjct: 158 QNKTIVALNPA---PARELPDELLALVDIITPNETE----AEKLTG---IR-VENDEDAA 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ A VL EKGIR V++TLGS GV
Sbjct: 207 K--------AAQVLHEKGIRTVLITLGSRGV 229
>sp|P0A9J7|RBSK_ECO57 Ribokinase OS=Escherichia coli O157:H7 GN=rbsK PE=3 SV=1
Length = 309
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
GG N A + G+ I+ G D G + + + + + K T V
Sbjct: 40 FGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVA- 98
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAA 124
++ VNGE + L+P + I++AS L++ ++ A+ KIA
Sbjct: 99 -LIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAH 157
Query: 125 ECNIPVWFEPVSVTKSRRI-TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSA 183
+ V P +R + ++ + +++PNE E A L+G R ++ ++ +A
Sbjct: 158 QNKTIVALNPA---PARELPDELLALVDIITPNETE----AEKLTG---IR-VENDEDAA 206
Query: 184 ESLFQTLKPAILVLLEKGIRLVVLTLGSDGV 214
+ A VL EKGIR V++TLGS GV
Sbjct: 207 K--------AAQVLHEKGIRTVLITLGSRGV 229
>sp|B3E5M9|HLDE_GEOLS Bifunctional protein HldE OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=hldE PE=3 SV=1
Length = 491
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGG A NVA + LG + + S +G D G LL+ + G+ T I ++ T +
Sbjct: 55 LGG-AGNVANNLLALGCQVTVASVIGEDENGWALLKAFSRQGVDTAPIYQEPGRRTGRKT 113
Query: 65 NILDVNGELAA-AVASVESIEKFLTPDWIRQFIHHISSASVLMV----DANLSPPALAAS 119
++ N ++ S E + + I HI+ V++V L+P LA+
Sbjct: 114 RVIAANQQIVRIDRESREPLSGQIEQQLINWLQQHITGFDVVLVSDYLKGVLTPSVLASV 173
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSG 169
A+ NIPV +P S+ + T ++PN E A A SG
Sbjct: 174 TSTASRRNIPVLVDPKGSDYSK-----YRGATCLTPNRKE----AEAASG 214
>sp|P44331|RBSK_HAEIN Ribokinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=rbsK PE=3 SV=1
Length = 306
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 2 NYVL--GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDID 59
NY + GG N A ++LG+K IS +G D G + + G+ T I
Sbjct: 33 NYQIAYGGKGANQAVAAARLGAKVAFISCIGSDSIGKTMKNAFAQEGIDTTHINTVSQEM 92
Query: 60 TAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAAS 119
T + + + E + +AS L+ +RQ I+ + L++ + +
Sbjct: 93 TGMAFIQVAKSSENSIVLAS--GANSHLSEMVVRQSEAQIAQSDCLLMQLETPLSGVELA 150
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITS--VVKYITVVSPNEDELVAMANALSGENMFRPID 177
+IA + + V P +I S ++ I +++PNE E A L+G +
Sbjct: 151 AQIAKKNGVKVVLNPAPA----QILSDELLSLIDIITPNETE----AEILTGVEVADE-- 200
Query: 178 RNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSK 219
Q+ A V +KGI V++TLG+ GV + K
Sbjct: 201 ----------QSAVKAASVFHDKGIETVMITLGAKGVFVSRK 232
>sp|Q74BF6|HLDE_GEOSL Bifunctional protein HldE OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=hldE PE=3 SV=1
Length = 490
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 7 GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNI 66
G A NVA + LG + + S +G D G ILL + G+ GI T+ + +
Sbjct: 56 GGAGNVANNLVALGCRVSVASVVGGDENGTILLHAFSGKGIDVTGIVEDPSRTTSRKTRV 115
Query: 67 LDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSAS-----VLMVD---ANLSPPALAA 118
L N ++ ES ++ + PD R+ + ++++ +L+ D L+P LA
Sbjct: 116 LASNQQIVR--IDRESRDE-IGPDNERRIVDYLNAHGDRFNVILVSDYLKGVLTPTLLAE 172
Query: 119 SCKIAAECNIPVWFEPVSVTKSRRITSVVKY--ITVVSPNEDELVAMANALSGENMFRPI 176
A + IPV +P + + KY TV++PN E A A SG R
Sbjct: 173 VIAFARKREIPVVVDP-------KGSDYAKYRGATVLTPNRKE----AEAASG-IAIRDD 220
Query: 177 DRNKHSAESLFQTLKPAILVLL--EKGIRL 204
+ + E L +T LV+ E+G+ L
Sbjct: 221 ESLCRAGERLLETADLTALVITRSEEGMSL 250
>sp|O82616|SCRK5_ARATH Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2
SV=1
Length = 324
Score = 38.9 bits (89), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 35/229 (15%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA ++KLG K I G D G++L+ K G+++EG+ + TA+
Sbjct: 37 GGAPANVACAITKLGGKSAFIGKFGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFV 96
Query: 66 ILDVNGELAAAV-----ASVESIEKFLTPDWIRQF-IHHISSASVLMVDANLSPPALAAS 119
L +GE A + E L D I++ I H S S++ + A +
Sbjct: 97 TLKKDGEREFMFYRNPSADMLLKESELNKDLIKKAKIFHYGSISLISEPCRTAHMAAMKT 156
Query: 120 CKIAA-------ECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
K A +P+W P + I S+ ++ ++DE+ +
Sbjct: 157 AKDAGVLLSYDPNVRLPLW--PSTEAAIEGIKSIWNEADIIKVSDDEVTFLTRG------ 208
Query: 173 FRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221
D K +L L+ ++L+++T G G +K+
Sbjct: 209 ----DAEKDD----------VVLSLMHDKLKLLIVTDGEKGCRYYTKKF 243
>sp|Q9CF42|RBSK_LACLA Ribokinase OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=rbsK PE=3 SV=1
Length = 300
Score = 38.5 bits (88), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 108/305 (35%), Gaps = 80/305 (26%)
Query: 4 VLGGVARNVAECMSKLG-SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRR-QKDIDTA 61
V GG N A ++L ++ MI A+G D G +L+++K + E + + A
Sbjct: 36 VPGGKGANQAVAFARLSPNEVSMIGAVGKDAFGESILQNFKENAVLFENVGTVPQTTGIA 95
Query: 62 VVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCK 121
++ D N + A+ E + +L W I + ++++ + A K
Sbjct: 96 QITLYDDDNRIIIIPGANNEVLPSYLADLW-----EKIKESQLVILQNEIPHETNLAIAK 150
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKH 181
E I V + P K+ ++ ++ ++PNE H
Sbjct: 151 FCKENAIKVLYNPAPARKTD--LEMIDFVDYITPNE-----------------------H 185
Query: 182 SAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241
+ LF L A+ +L+K +++TLGS+GV+ E L +
Sbjct: 186 ECKELFPNL--ALEEILKKYSNRLIVTLGSEGVIFHDGETLQKI---------------- 227
Query: 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLD 301
PA+ A VV TGAGD G ++ L
Sbjct: 228 ------------------------------PAIKAKVVDTTGAGDTFNGAFAFGLTENLS 257
Query: 302 VMQSV 306
+ S+
Sbjct: 258 ISDSI 262
>sp|Q39X60|HLDE_GEOMG Bifunctional protein HldE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hldE PE=3 SV=1
Length = 490
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 26/174 (14%)
Query: 7 GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI----RRQKDIDTAV 62
G A NVA + LG + + S +G D G ILL + G+ G+ +R T V
Sbjct: 56 GGAGNVANNLVALGCRVSVASVVGGDENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRV 115
Query: 63 VS---NILDVNGELAAAVAS--VESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALA 117
V+ I+ ++ E + + E I FL R + IS + L+P LA
Sbjct: 116 VAANQQIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISD----YLKGVLTPTLLA 171
Query: 118 ASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--ITVVSPNEDELVAMANALSG 169
A +A E IPV +P + KY T+++PN E A A SG
Sbjct: 172 AVIAVARERKIPVVVDP-------KGNDYTKYRGATLLTPNRKE----AEAASG 214
>sp|O59128|Y1459_PYRHO Uncharacterized sugar kinase PH1459 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC
100139 / OT-3) GN=PH1459 PE=1 SV=1
Length = 310
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVV 63
GG NVA +S+LG K +IS +G D G L+E + T GI + + T +V
Sbjct: 37 GGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIV 94
>sp|B5EEZ1|HLDE_GEOBB Bifunctional protein HldE OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=hldE PE=3 SV=1
Length = 487
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGG A NV ++ LG + + S +G D G +L + G EG+ + + T+ +
Sbjct: 55 LGG-AGNVVNNLAALGCQVSVCSVIGSDENGALLRRALEEKGAGLEGLFEEGERRTSKKT 113
Query: 65 NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAAS 119
+L N ++ +S + I ++ S ++V ++ L+P L+A
Sbjct: 114 RVLAANQQIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDYLKGVLTPAVLSAV 173
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159
C+ E IPV +P + + T+++PN E
Sbjct: 174 CRSGRELGIPVVVDPKGNDYGK-----YRGATILTPNRKE 208
>sp|A1AV12|HLDE_PELPD Bifunctional protein HldE OS=Pelobacter propionicus (strain DSM
2379) GN=hldE PE=3 SV=1
Length = 488
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 83/312 (26%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGI----RRQKDIDT 60
LGG A NV + +LG++ + S +G D G LLE + G++T+ I R+ T
Sbjct: 55 LGG-AGNVVNNLVELGAEVTVCSVVGDDDNGQALLEAFGRRGVATDAIFLDATRRTSRKT 113
Query: 61 AVVS---NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN---LSPP 114
VV+ I+ ++ E +++ +E+ ++ DWI +L+ D L+P
Sbjct: 114 RVVAAHQQIVRIDRESRVPLSA--EVERRVS-DWITANAGGFD--VILLSDYQKGVLTPG 168
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
++A+ A IPV +P SR + T+++PN E A A SG +
Sbjct: 169 VISATLAAARPGAIPVLVDPKGTDFSRYSGA-----TLLTPNRRE----AEAASGIAI-- 217
Query: 175 PIDRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233
H ESL + A V++E+ G+ +++T +G+ L S R
Sbjct: 218 ------HDIESLVR----AAGVIMERVGLEHLLITRSEEGMSLFS-----------RSAA 256
Query: 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTL 293
P +H P + V ++GAGD ++
Sbjct: 257 P----------------------------------MHIPTVAREVFDVSGAGDTVLASLA 282
Query: 294 ASISSGLDVMQS 305
A +++G++++++
Sbjct: 283 AGMAAGMEMIEA 294
>sp|Q0C190|HLDE_HYPNA Bifunctional protein HldE OS=Hyphomonas neptunium (strain ATCC
15444) GN=hldE PE=3 SV=1
Length = 486
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 7 GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHW-KSAGLSTEGIRRQKDIDT----- 60
G A NVA ++ LG +P +I A G D AG LL + + LS + + T
Sbjct: 55 GGAANVARNLASLGLEPVLIGACGDDDAGRELLSIFDQDLSLSVRLVTAKGRPTTLKCRF 114
Query: 61 -AVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVD---ANLSPPAL 116
A +L V+ E A V+ E+ E+ L R+ SA++L+ D L+ L
Sbjct: 115 VAGGHQLLRVDTENVAPVS--EATEEELIGILSREAP---GSAAILISDYAKGLLTDRLL 169
Query: 117 AASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--ITVVSPNEDELVAMANALSGENMFR 174
A K+AA+ NIP+ +P K R +Y + ++ PN EL A + R
Sbjct: 170 KAVTKLAADLNIPLIADP----KGR---DFARYGAVDILKPNAFELSAA--------VHR 214
Query: 175 PIDRNKHSAESLFQTLK--PAILVLLEKGIRLVVLTLGSDG 213
I ++ +A +L + L PA +++ + R + +G DG
Sbjct: 215 SISTDEEAALALREALDTLPAKAIIVTRAARGISY-IGQDG 254
>sp|Q9LNE4|SCRK3_ARATH Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2
SV=1
Length = 345
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +S+LG + + LG D G++L + G+ +GI + TA+
Sbjct: 41 GGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFV 100
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVL 105
L +GE S + L PD + + I SA V
Sbjct: 101 TLRSDGEREFMFYRNPSADMLLRPDELN--LELIRSAKVF 138
>sp|P30427|PLEC_RAT Plectin OS=Rattus norvegicus GN=Plec PE=1 SV=2
Length = 4687
Score = 36.2 bits (82), Expect = 0.34, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 32 DMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD--VNGELAAAVASVESIEKFLTP 89
D +G +LL + L+ G+R+Q ++ V S ++D +L + S+E + K L
Sbjct: 4008 DNSGQMLLPLSDARKLTFRGLRKQITVEELVRSQVMDEATALQLQEGLTSIEEVTKNL-- 4065
Query: 90 DWIRQFIHHISSASVLMVDANLSPPALAASCK------------IAAECNIPVWFEPVSV 137
++F+ S + + VDA ++ + K + A+ +P+
Sbjct: 4066 ---QKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKG 4122
Query: 138 TKSRRITSVVKYITVVSPN-EDELVAMANALSGENMFRPIDRNKHSAE--SLFQTLKPAI 194
K + V+ + +V P +D+L++ A++G ++ +S + SLFQ +K
Sbjct: 4123 LK-LTVEEAVR-MGIVGPEFKDKLLSAERAVTGY-------KDPYSGKLISLFQAMKKG- 4172
Query: 195 LVLLEKGIRLVVLTLGSDGVL 215
L+L + GIRL+ + + G++
Sbjct: 4173 LILKDHGIRLLEAQIATGGII 4193
>sp|A0L7X0|HLDE_MAGSM Bifunctional protein HldE OS=Magnetococcus sp. (strain MC-1)
GN=hldE PE=3 SV=2
Length = 487
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 7 GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNI 66
G A NVA ++KLG ++ +G D G +L+ + +G+ T GI T + +
Sbjct: 52 GGAANVASNLAKLGLHTSIVGFVGEDSDGQVLISALQESGIDTHGILPLAGWSTITKTRV 111
Query: 67 ---------LDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVD---ANLSPP 114
+D LA + + + + + P + H+ +++ D LS
Sbjct: 112 IGGHQQILRMDRETPLADTAHASQLLHQQVMPMLEGEQRPHV----IILSDYAKGVLSFE 167
Query: 115 ALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFR 174
A A IPV +P +R ++ T +SPN EL + G+
Sbjct: 168 LCQALIVRARNLGIPVLVDPKGRDYAR-----YRHATALSPNRGELRGVTGVEDGD---- 218
Query: 175 PIDRNKHSAESLFQTLKPAIL--VLLEKGIRLV 205
++ + ESL Q+L A L L E+GI LV
Sbjct: 219 -LNTLLDAGESLRQSLDVAFLAVTLSEQGIALV 250
>sp|P76419|YEGV_ECOLI Uncharacterized sugar kinase YegV OS=Escherichia coli (strain K12)
GN=yegV PE=3 SV=1
Length = 321
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 271 FPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDA 311
PA P VV GAGD GG LA ++SGL + +V + +A
Sbjct: 254 IPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNA 294
>sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2
SV=1
Length = 329
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 39/236 (16%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +S+LG + + LG D G++L + + +GI K TA+
Sbjct: 42 GGAPANVAIAVSRLGGRAAFVGKLGDDEFGHMLAGILRKNDVDDQGINFDKGARTALAFV 101
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN--LSPPALAASCK-- 121
L +GE S + L PD + + I SA V + ++ P +A K
Sbjct: 102 TLRSDGEREFMFYRNPSADMLLRPDELN--LELIRSAKVFHYGSISLITEPCRSAHMKAM 159
Query: 122 -IAAECNI----------PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGE 170
+A E P+W P K +I S+ ++ ++ EL L+G
Sbjct: 160 EVAKEAGALLSYDPNLREPLWPSPEEARK--QIMSIWDKADIIKVSDVEL----EFLTGN 213
Query: 171 NMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226
+ ID +A SL+ ++L+++TLG +G +K+ S+
Sbjct: 214 ---KTID--DETAMSLWHP-----------NLKLLLVTLGENGCRYYTKDFHGSVE 253
>sp|Q9JI55|PLEC_CRIGR Plectin (Fragment) OS=Cricetulus griseus GN=PLEC PE=1 SV=1
Length = 4473
Score = 35.8 bits (81), Expect = 0.49, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 32 DMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD--VNGELAAAVASVESIEKFLTP 89
D +G +LL + L+ G+R+Q ++ V S ++D +L + S+E + K L
Sbjct: 3794 DGSGQMLLPLSDARRLTFRGLRKQITVEELVRSQVMDEATALQLQEGLTSIEEVTKTL-- 3851
Query: 90 DWIRQFIHHISSASVLMVDANLSPPALAASCK------------IAAECNIPVWFEPVSV 137
++F+ S + + VDA ++ + K + A+ +P+
Sbjct: 3852 ---QKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKG 3908
Query: 138 TKSRRITSVVKYITVVSPN-EDELVAMANALSGENMFRPIDRNKHSAE--SLFQTLKPAI 194
K + V+ + +V P +D L++ A++G ++ +S + SLFQ +K
Sbjct: 3909 LK-LTVEEAVR-MGIVGPEFKDRLLSAERAVTGY-------KDPYSGKLISLFQAMKKG- 3958
Query: 195 LVLLEKGIRLVVLTLGSDGVL 215
L+L + GIRL+ + + G++
Sbjct: 3959 LILKDHGIRLLEAQIATGGII 3979
>sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2
SV=1
Length = 325
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA +S+LG + + LG D G++L + G+ +GI TA+
Sbjct: 40 GGAPANVAIAVSRLGGRSAFVGKLGDDEFGHMLAGILRKNGVDDQGINFDTGARTALAFV 99
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWIR------QFIHHISSASVLMV---DANLSPPAL 116
L +G+ S + L PD + + H S S+++ A+L +
Sbjct: 100 TLRADGDREFMFYRNPSADMLLRPDELNLDLIRSAKVFHYGSISLIVEPCRSAHLKAMEV 159
Query: 117 A--ASCKIAAECNI--PVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENM 172
A A ++ + N+ P+W P +I S+ ++ ++ EL L+G N
Sbjct: 160 AKEAGALLSYDPNLREPLW--PSKEEAKTQIMSIWDKAEIIKVSDVEL----EFLTGSNK 213
Query: 173 FRPIDRNKHSAESLFQ-TLKPAILVLLEKGIRLVVLTL 209
+ +A +L+ LK ++ L EKG R T
Sbjct: 214 I-----DDETALTLWHPNLKLLLVTLGEKGCRYYTKTF 246
>sp|Q6XZ78|SCRK2_MAIZE Fructokinase-2 OS=Zea mays GN=FRK2 PE=1 SV=1
Length = 335
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 86/239 (35%), Gaps = 47/239 (19%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN 65
GG NVA ++KLG + G D G++L+ K ++ EG K TA+
Sbjct: 49 GGAPANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNAEGCLFDKHARTALAFV 108
Query: 66 ILDVNGELAAAVASVESIEKFLTPDWI------RQFIHHISSASVLMVDANLSPPALAAS 119
L +GE S + LT + R + H S S+ +S P +A
Sbjct: 109 TLKHDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISL------ISEPCRSAH 162
Query: 120 -------------CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANA 166
C +P+W P + + I S+ K + ++DE+ +
Sbjct: 163 MAAMRAAKAAGVLCSYDPNVRLPLWPSPDAAREG--ILSIWKEADFIKVSDDEVAFLTRG 220
Query: 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSM 225
D N +L L G++L+V+T G G +K+ S+
Sbjct: 221 ----------DANDEK----------NVLSLWFDGLKLLVVTDGDKGCRYFTKDFKGSV 259
>sp|A0RQR9|HLDE_CAMFF Bifunctional protein HldE OS=Campylobacter fetus subsp. fetus
(strain 82-40) GN=hldE PE=3 SV=1
Length = 458
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
LGG+ NV + LGS+ +IS +G D G+ +LE K G TE I ++K ++ S
Sbjct: 41 LGGLG-NVVSNLKTLGSEVGVISVVGDDDVGDEILELLKDRGAKTELIIKEKGRKSSQKS 99
Query: 65 NILDVNGELAAAVASVESI-EKFLTPDWIRQFIHHISSASVLMV----DANLSPPALAAS 119
I+ + ++ ES+ E ++ D I +F + +S ++++ LSP
Sbjct: 100 RIMVAHQQVLR--LDTESVCEIGVSDDIISKFENILSGYDIVLLSDYGKGVLSPYLTKEI 157
Query: 120 CKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV-AMANALSGENMFRPIDR 178
+I + V +P S+ + T+++PN+ E A+ ++ E D
Sbjct: 158 IRITKKSGKMVLIDPKGKDYSKYSGA-----TLLTPNKKEASEALGFGINDE------DD 206
Query: 179 NKHSAESLFQTLK--PAILVLLEKGIRLV 205
KH+ + L K +++ L E GI L+
Sbjct: 207 LKHALKMLKDKFKLNYSLITLSEDGIALL 235
>sp|Q9QXS1|PLEC_MOUSE Plectin OS=Mus musculus GN=Plec PE=1 SV=2
Length = 4691
Score = 35.4 bits (80), Expect = 0.62, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 32 DMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD--VNGELAAAVASVESIEKFLTP 89
D +G +LL + L+ G+R+Q ++ V S ++D +L + S+E + K L
Sbjct: 4012 DPSGQMLLLLSDARKLTFRGLRKQITVEELVRSQVMDEATALQLQEGLTSIEEVTKNL-- 4069
Query: 90 DWIRQFIHHISSASVLMVDANLSPPALAASCK------------IAAECNIPVWFEPVSV 137
++F+ S + + VDA ++ + K + A+ +P+
Sbjct: 4070 ---QKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKG 4126
Query: 138 TKSRRITSVVKYITVVSPN-EDELVAMANALSGENMFRPIDRNKHSAE--SLFQTLKPAI 194
K + V+ + +V P +D+L++ A++G ++ +S + SLFQ +K
Sbjct: 4127 LK-LTVEEAVR-MGIVGPEFKDKLLSAERAVTGY-------KDPYSGKLISLFQAMKKG- 4176
Query: 195 LVLLEKGIRLVVLTLGSDGVL 215
L+L + GIRL+ + + G++
Sbjct: 4177 LILKDHGIRLLEAQIATGGII 4197
>sp|A6VUP1|GLGA_MARMS Glycogen synthase OS=Marinomonas sp. (strain MWYL1) GN=glgA PE=3
SV=1
Length = 476
Score = 34.7 bits (78), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Query: 197 LLEKGIRLVVLTLGSDGVLLCSKELLS------SMRIGLRKTKPYGFSRDLYKTVTSRCH 250
LLEKG RLVVL G + EL + S+RIG + +S L + +
Sbjct: 321 LLEKGARLVVLGSGDKYLESQYLELQNNYPNQVSVRIGYFED----YSHRLQAGIDALLI 376
Query: 251 SSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGA 284
SR+ EP G +Q +A+ + LP +VR TG
Sbjct: 377 PSRF----EPCGLTQLYALKYGTLP--IVRQTGG 404
>sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3
Length = 4684
Score = 34.7 bits (78), Expect = 1.1, Method: Composition-based stats.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 32 DMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD--VNGELAAAVASVESIEKFLTP 89
D G +LL + L+ G+R+Q ++ V S ++D +L + S+E + K L
Sbjct: 4005 DGTGQLLLPLSDARKLTFRGLRKQITMEELVRSQVMDEATALQLREGLTSIEEVTKNL-- 4062
Query: 90 DWIRQFIHHISSASVLMVDANLSPPALAASCK------------IAAECNIPVWFEPVSV 137
++F+ S + + VDA ++ + K + A+ +P+
Sbjct: 4063 ---QKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKG 4119
Query: 138 TKSRRITSVVKYITVVSPN-EDELVAMANALSGENMFRPIDRNKHSAE--SLFQTLKPAI 194
K + V+ + +V P +D+L++ A++G ++ +S + SLFQ +K
Sbjct: 4120 LK-LTVEEAVR-MGIVGPEFKDKLLSAERAVTGY-------KDPYSGKLISLFQAMKKG- 4169
Query: 195 LVLLEKGIRLVVLTLGSDGVL 215
L+L + GIRL+ + + G++
Sbjct: 4170 LILKDHGIRLLEAQIATGGII 4190
>sp|Q98I54|HLDE_RHILO Bifunctional protein HldE OS=Rhizobium loti (strain MAFF303099)
GN=hldE PE=3 SV=1
Length = 496
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 7 GVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNI 66
G A NV + LG++ +S +G D AG+ L+ G T G+ +Q+ T+ S
Sbjct: 62 GGAGNVVANIVSLGARAIPVSVIGTDTAGDSLVRMLAELGAETAGLSQQRGRMTSSKSRF 121
Query: 67 LDVNGE-LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMV----DANLSPPALAASCK 121
+N + L ++ +++ IR F ++ A ++++ L A
Sbjct: 122 SALNQQVLRFDEEEIKPLDETERAGLIRHFRAALAGAEIVILSDYGKGILLDGVAAELIA 181
Query: 122 IAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160
I E PV +P +R + T ++PN EL
Sbjct: 182 ICREAGKPVLVDPKGRDYARYAGA-----TAITPNRKEL 215
>sp|Q723S9|IOLC_LISMF 5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype
4b (strain F2365) GN=iolC PE=3 SV=1
Length = 325
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEG-IRRQKDIDTAVV 63
+GG N+A +KLG K I + D G + ++ + ++T+G ++ + +
Sbjct: 42 VGGSPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLSINTDGMVKDTEGRKVGLA 101
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL-----SPPALAA 118
+ E + + + +LTP+ I + +I A VL++ S A+
Sbjct: 102 FTEIKSPDECSILMYRENVADLYLTPEEISE--DYIKEARVLLISGTALAQSPSREAVLK 159
Query: 119 SCKIAAECNIPVWFE----PVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGE 170
+ +A + ++ V FE P + T + + V + V+ DE M N + G+
Sbjct: 160 AVSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGK 219
Query: 171 NMFRPIDRNKHSAE 184
N +H AE
Sbjct: 220 NEATKAHLFQHQAE 233
>sp|C1KZA1|IOLC_LISMC 5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype
4b (strain CLIP80459) GN=iolC PE=3 SV=1
Length = 325
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEG-IRRQKDIDTAVV 63
+GG N+A +KLG K I + D G + ++ + ++T+G ++ + +
Sbjct: 42 VGGSPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLSINTDGMVKDTEGRKVGLA 101
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL-----SPPALAA 118
+ E + + + +LTP+ I + +I A VL++ S A+
Sbjct: 102 FTEIKSPDECSILMYRENVADLYLTPEEISE--DYIKEARVLLISGTALAQSPSREAVLK 159
Query: 119 SCKIAAECNIPVWFE----PVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGE 170
+ +A + ++ V FE P + T + + V + V+ DE M N + G+
Sbjct: 160 AVSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGK 219
Query: 171 NMFRPIDRNKHSAE 184
N +H AE
Sbjct: 220 NEATKAHLFQHQAE 233
>sp|Q898F0|IOLC_CLOTE 5-dehydro-2-deoxygluconokinase OS=Clostridium tetani (strain
Massachusetts / E88) GN=iolC PE=3 SV=1
Length = 339
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKD 57
LGG N+A +++LG K +S + D GN ++ + K+ G+ I R K+
Sbjct: 43 LGGSPGNIAVGLARLGKKVGFLSTVSDDQFGNFVVNYLKNEGIDISQINRAKN 95
>sp|B8DCT6|IOLC_LISMH 5-dehydro-2-deoxygluconokinase OS=Listeria monocytogenes serotype
4a (strain HCC23) GN=iolC PE=3 SV=1
Length = 325
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEG-IRRQKDIDTAVV 63
+GG N+A +KLG K I + D G + ++ + ++T+G ++ + +
Sbjct: 42 VGGSPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLSINTDGMVKDTEGRKVGLA 101
Query: 64 SNILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDANL-----SPPALAA 118
+ E + + + +LTP+ I + +I A VL++ S A+
Sbjct: 102 FTEIKSPDECSILMYRENVADLYLTPEEISE--DYIKEARVLLISGTALAQSPSREAVLK 159
Query: 119 SCKIAAECNIPVWFE----PVSVTKSRRI----TSVVKYITVVSPNEDELVAMANALSGE 170
+ +A + ++ + FE P + T + + V + V+ DE M N + G+
Sbjct: 160 AVSLARKNDVAIAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGK 219
Query: 171 NMFRPIDRNKHSAE 184
N +H AE
Sbjct: 220 NEATKAHLFQHQAE 233
>sp|P26420|SCRK_KLEPN Fructokinase OS=Klebsiella pneumoniae GN=scrK PE=3 SV=1
Length = 307
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 270 HFPALPASVVRLTGAGDCLVGGTLASISS 298
HFPA P V TGAGD V G LA +++
Sbjct: 235 HFPARPVVAVDTTGAGDAFVAGLLAGLAA 263
>sp|Q9HKX5|SYS_THEAC Serine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=serS PE=3 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 38 LLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESI 83
L E W+S G+R QK+ +T ++ ++ NG+ +A +VE I
Sbjct: 34 LDEEWRSINRELNGLRSQKNRETRKIAELIKNNGDASAEKKAVEDI 79
>sp|Q0BPL3|GLGA_GRABC Glycogen synthase OS=Granulibacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1) GN=glgA PE=3 SV=1
Length = 480
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 193 AILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY-GFSRDLYKTVTSRCHS 251
A+ L+ + +LVVL G G+ + LL + + R+ + G+ L + + S +
Sbjct: 313 ALPFLISQQAQLVVLGSGDKGL---EQGLLQAAQTHPRQIAVFSGYDEALSRQIFSGADA 369
Query: 252 SRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGL 300
EP G +Q +A+ + A+P V R+ G D ++ A+ +G+
Sbjct: 370 MLIPSRFEPCGLTQLYAMRYGAVPI-VSRVGGLADTIIDANTAACEAGV 417
>sp|Q92EQ5|IOLC_LISIN 5-dehydro-2-deoxygluconokinase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=iolC PE=3 SV=1
Length = 325
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 40/206 (19%)
Query: 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVS 64
+GG N+A +KLG K I + D G + ++ + ++T+G+ + DTA
Sbjct: 42 VGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLNINTDGMVK----DTA--- 94
Query: 65 NILDVNGELAAAVASVESIEK-------------FLTPDWIRQFIHHISSASVLMVDANL 111
++ A ++S E+ +LTP+ I + +I VL+V
Sbjct: 95 -----GRKVGLAFTEIKSPEECSILMYRENVADLYLTPEEISE--DYIKETRVLLVSGTA 147
Query: 112 -----SPPALAASCKIAAECNIPVWFE----PVSVTKSRRI----TSVVKYITVVSPNED 158
S A+ + +A + ++ V FE P + + + V + V+ D
Sbjct: 148 LAQSPSREAVLKAVHLAQKNDVIVAFELDYRPYTWKNTEETAVYYSLVAEQADVIIGTRD 207
Query: 159 ELVAMANALSGENMFRPIDRNKHSAE 184
E M N + G N + KH AE
Sbjct: 208 EFDMMENQIGGNNEMTIDNLFKHKAE 233
>sp|O27587|Y1544_METTH Uncharacterized sugar kinase MTH_1544 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1544 PE=3 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 6 GGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTE 50
GG A NVA S+LG + ++SA+G D G+ E +S+G+ E
Sbjct: 41 GGAAANVALVGSRLGLRTSLVSAVGGDFEGSEYRELLESSGIDIE 85
>sp|Q1I411|HLDE_PSEE4 Bifunctional protein HldE OS=Pseudomonas entomophila (strain L48)
GN=hldE PE=3 SV=1
Length = 473
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 268 AVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAV 308
A+H PA V +TGAGD ++ A+I++G D+ +VA+
Sbjct: 245 ALHLPARAREVFDVTGAGDTVISTLAAAIAAGEDLPHAVAL 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,457,485
Number of Sequences: 539616
Number of extensions: 4342006
Number of successful extensions: 12400
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 12256
Number of HSP's gapped (non-prelim): 175
length of query: 327
length of database: 191,569,459
effective HSP length: 118
effective length of query: 209
effective length of database: 127,894,771
effective search space: 26730007139
effective search space used: 26730007139
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)