Query 036840
Match_columns 327
No_of_seqs 119 out of 1413
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:42:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kzh_A Probable sugar kinase; 100.0 3.3E-40 1.1E-44 309.6 23.7 253 2-319 38-290 (328)
2 3ry7_A Ribokinase; transferase 100.0 6E-40 2E-44 304.0 22.0 252 2-319 36-288 (304)
3 2nwh_A AGR_C_3442P, carbohydra 100.0 2E-39 6.7E-44 302.9 23.7 252 2-319 35-288 (317)
4 1rkd_A Ribokinase; carbohydrat 100.0 5.9E-39 2E-43 298.2 23.6 252 2-319 37-288 (309)
5 3iq0_A Putative ribokinase II; 100.0 1.1E-39 3.7E-44 306.3 17.9 248 3-319 34-293 (330)
6 2fv7_A Ribokinase; structural 100.0 1.5E-38 5E-43 298.8 22.9 253 2-319 57-313 (331)
7 3ljs_A Fructokinase; fructokia 100.0 1.6E-39 5.6E-44 305.9 13.3 252 2-320 32-310 (338)
8 3lhx_A Ketodeoxygluconokinase; 100.0 7.6E-39 2.6E-43 299.0 17.3 252 2-319 25-299 (319)
9 3vas_A Putative adenosine kina 100.0 5.4E-38 1.8E-42 299.5 23.3 253 2-319 77-353 (370)
10 4du5_A PFKB; structural genomi 100.0 1.5E-38 5.2E-43 299.4 19.0 250 2-320 54-319 (336)
11 3otx_A Adenosine kinase, putat 100.0 9.3E-38 3.2E-42 294.9 23.9 252 2-319 60-334 (347)
12 3pl2_A Sugar kinase, ribokinas 100.0 2.9E-38 9.9E-43 294.8 20.0 249 2-320 37-299 (319)
13 3h49_A Ribokinase; transferase 100.0 6.6E-38 2.3E-42 293.5 21.0 247 2-319 39-295 (325)
14 4e69_A 2-dehydro-3-deoxyglucon 100.0 9.3E-38 3.2E-42 293.1 20.7 248 2-319 46-312 (328)
15 3ikh_A Carbohydrate kinase; tr 100.0 5.5E-38 1.9E-42 290.9 18.8 234 2-320 35-270 (299)
16 4e3a_A Sugar kinase protein; s 100.0 6.1E-38 2.1E-42 297.3 19.4 246 2-319 76-333 (352)
17 2rbc_A Sugar kinase, AGR_C_456 100.0 5.7E-38 1.9E-42 296.5 18.6 244 2-319 62-309 (343)
18 3loo_A Anopheles gambiae adeno 100.0 1.5E-37 5E-42 295.9 21.4 253 2-320 76-351 (365)
19 1v1a_A 2-keto-3-deoxygluconate 100.0 2.5E-37 8.7E-42 287.3 21.2 244 2-320 29-285 (309)
20 2v78_A Fructokinase; transfera 100.0 1.2E-37 4.2E-42 290.0 17.6 245 2-319 29-291 (313)
21 2qcv_A Putative 5-dehydro-2-de 100.0 2.6E-37 9E-42 289.8 19.9 254 2-320 40-307 (332)
22 3ktn_A Carbohydrate kinase, PF 100.0 1.6E-37 5.5E-42 293.1 18.3 258 2-319 30-313 (346)
23 3uq6_A Adenosine kinase, putat 100.0 1E-36 3.5E-41 290.9 23.0 257 2-319 79-355 (372)
24 1vm7_A Ribokinase; TM0960, str 100.0 8.9E-37 3E-41 284.3 22.0 244 2-319 47-291 (311)
25 3hj6_A Fructokinase, FRK; fruc 100.0 1.9E-38 6.4E-43 297.5 9.2 247 2-320 50-309 (327)
26 2dcn_A Hypothetical fructokina 100.0 2.5E-37 8.5E-42 287.5 15.8 244 2-319 29-289 (311)
27 4e84_A D-beta-D-heptose 7-phos 100.0 7.6E-37 2.6E-41 289.8 19.4 247 2-319 90-339 (352)
28 1tyy_A Putative sugar kinase; 100.0 5.1E-38 1.8E-42 296.2 10.3 247 2-319 46-310 (339)
29 2c4e_A Sugar kinase MJ0406; tr 100.0 3E-37 1E-41 286.0 15.3 239 2-319 38-280 (302)
30 1bx4_A Protein (adenosine kina 100.0 1.7E-36 5.9E-41 285.9 20.2 252 2-319 59-333 (345)
31 3umo_A 6-phosphofructokinase i 100.0 8.1E-36 2.8E-40 277.0 23.9 245 2-319 34-289 (309)
32 2jg1_A Tagatose-6-phosphate ki 100.0 6.5E-36 2.2E-40 280.7 22.2 245 2-319 52-307 (330)
33 2abq_A Fructose 1-phosphate ki 100.0 1E-35 3.5E-40 276.1 23.1 244 2-320 32-283 (306)
34 2pkf_A Adenosine kinase; trans 100.0 5.9E-36 2E-40 281.5 20.9 244 2-319 53-300 (334)
35 2qhp_A Fructokinase; NP_810670 100.0 2.6E-36 9E-41 278.5 18.1 250 3-319 21-280 (296)
36 3ie7_A LIN2199 protein; phosph 100.0 1.3E-36 4.5E-41 283.8 16.2 242 2-320 35-287 (320)
37 3cqd_A 6-phosphofructokinase i 100.0 5.4E-36 1.9E-40 278.2 20.1 245 2-320 34-290 (309)
38 3go6_A Ribokinase RBSK; phosph 100.0 1.2E-36 4.1E-41 283.5 14.2 229 2-319 52-285 (310)
39 2ajr_A Sugar kinase, PFKB fami 100.0 5.1E-36 1.7E-40 281.5 17.7 245 2-319 47-307 (331)
40 3b1n_A Ribokinase, putative; r 100.0 1E-35 3.4E-40 279.1 19.6 239 2-319 43-286 (326)
41 2hlz_A Ketohexokinase; non-pro 100.0 3.1E-35 1.1E-39 273.9 22.8 244 2-319 50-305 (312)
42 2afb_A 2-keto-3-deoxygluconate 100.0 9.4E-36 3.2E-40 281.6 19.0 263 2-319 40-325 (351)
43 2f02_A Tagatose-6-phosphate ki 100.0 4E-35 1.4E-39 274.4 22.0 245 2-319 34-290 (323)
44 2abs_A Adenosine kinase, AK; r 100.0 3.5E-35 1.2E-39 281.1 21.9 263 2-319 84-371 (383)
45 2jg5_A Fructose 1-phosphate ki 100.0 4.8E-35 1.6E-39 271.3 21.6 243 2-319 32-282 (306)
46 3ewm_A Uncharacterized sugar k 100.0 6.1E-36 2.1E-40 278.6 15.2 238 2-319 29-282 (313)
47 4gm6_A PFKB family carbohydrat 100.0 4.4E-36 1.5E-40 283.7 10.4 255 2-319 52-326 (351)
48 3kd6_A Carbohydrate kinase, PF 100.0 1.9E-34 6.3E-39 268.8 16.8 243 2-320 24-278 (313)
49 3bf5_A Ribokinase related prot 100.0 7E-34 2.4E-38 264.3 13.9 225 2-319 52-279 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 3.1E-34 1.1E-38 265.5 9.2 237 2-319 32-280 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 1E-22 3.6E-27 189.2 15.0 220 22-321 12-271 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 5.1E-22 1.8E-26 182.0 13.2 219 20-321 20-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 9.5E-21 3.2E-25 174.2 16.7 224 22-320 25-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.8 2.7E-20 9.1E-25 168.1 16.5 217 23-318 2-242 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 1.4E-18 4.9E-23 157.9 20.2 217 24-319 5-249 (271)
56 3pzs_A PM kinase, pyridoxamine 99.7 2.5E-17 8.7E-22 151.5 14.3 171 87-320 57-262 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.7 4.7E-16 1.6E-20 142.6 13.6 154 101-316 74-245 (282)
58 3zs7_A Pyridoxal kinase; trans 99.7 1.2E-15 4.1E-20 141.1 15.3 177 86-320 55-264 (300)
59 3mbh_A Putative phosphomethylp 99.6 4.4E-16 1.5E-20 143.4 10.9 161 101-319 77-260 (291)
60 1ekq_A Hydroxyethylthiazole ki 99.5 2.3E-13 7.9E-18 124.0 11.6 159 97-311 54-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.4 2.2E-12 7.4E-17 128.6 13.0 158 101-318 91-276 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.0 2.1E-09 7.2E-14 97.3 12.3 158 97-310 52-218 (265)
63 2r3b_A YJEF-related protein; p 98.7 4.2E-08 1.4E-12 90.7 10.9 149 97-314 107-263 (310)
64 3drw_A ADP-specific phosphofru 98.7 1E-07 3.5E-12 92.1 13.4 205 2-218 113-367 (474)
65 3rss_A Putative uncharacterize 98.7 1.9E-07 6.4E-12 91.7 13.5 162 87-314 306-471 (502)
66 1ua4_A Glucokinase, ADP-depend 98.7 3.5E-07 1.2E-11 88.4 14.6 207 4-221 109-355 (455)
67 3bgk_A SMU.573, putative uncha 98.6 1.2E-08 4.2E-13 94.3 4.1 153 97-315 121-281 (311)
68 1l2l_A ADP-dependent glucokina 98.6 5.3E-07 1.8E-11 87.0 15.6 205 4-222 112-359 (457)
69 3rpz_A ADP/ATP-dependent NAD(P 98.6 4.9E-07 1.7E-11 82.2 12.7 147 98-310 95-243 (279)
70 1gc5_A ADP-dependent glucokina 98.6 6.3E-07 2.2E-11 86.6 13.7 205 4-221 117-365 (467)
71 3dzv_A 4-methyl-5-(beta-hydrox 98.5 2.3E-06 7.9E-11 77.4 13.7 164 97-311 54-228 (273)
72 3hpd_A Hydroxyethylthiazole ki 97.8 0.00035 1.2E-08 62.7 13.1 71 98-168 53-132 (265)
73 3nl6_A Thiamine biosynthetic b 97.6 0.00072 2.5E-08 66.8 14.4 72 95-166 299-379 (540)
74 3k5w_A Carbohydrate kinase; 11 97.0 0.0019 6.5E-08 62.8 8.7 146 99-309 290-438 (475)
75 3ijl_A Muconate cycloisomerase 55.4 44 0.0015 30.2 8.6 74 84-158 181-255 (338)
76 3can_A Pyruvate-formate lyase- 55.2 50 0.0017 26.4 8.2 44 112-155 17-60 (182)
77 3sho_A Transcriptional regulat 52.7 80 0.0027 25.2 9.1 101 86-213 23-126 (187)
78 2fcj_A Small toprim domain pro 51.3 15 0.00051 28.3 3.9 71 89-159 13-86 (119)
79 3tsm_A IGPS, indole-3-glycerol 46.9 1.1E+02 0.0038 26.8 9.5 97 99-207 140-248 (272)
80 3c8f_A Pyruvate formate-lyase 45.3 91 0.0031 25.7 8.5 53 103-155 71-128 (245)
81 3s5s_A Mandelate racemase/muco 43.4 94 0.0032 28.6 8.9 75 84-159 196-274 (389)
82 2e28_A Pyruvate kinase, PK; al 43.2 98 0.0033 30.5 9.2 106 87-209 171-280 (587)
83 3ctl_A D-allulose-6-phosphate 42.9 23 0.00079 30.4 4.2 54 100-154 79-133 (231)
84 3jva_A Dipeptide epimerase; en 42.1 72 0.0024 28.9 7.7 75 84-159 191-267 (354)
85 2wqp_A Polysialic acid capsule 39.9 58 0.002 29.8 6.6 92 110-208 87-181 (349)
86 3ik4_A Mandelate racemase/muco 38.2 93 0.0032 28.3 7.9 73 84-157 195-271 (365)
87 3v7e_A Ribosome-associated pro 36.9 45 0.0015 23.5 4.3 36 100-135 26-61 (82)
88 3r0u_A Enzyme of enolase super 36.9 94 0.0032 28.5 7.7 75 84-159 194-272 (379)
89 3ovp_A Ribulose-phosphate 3-ep 35.2 36 0.0012 29.1 4.2 54 100-154 86-139 (228)
90 3qtg_A Pyruvate kinase, PK; TI 35.2 1.3E+02 0.0044 28.6 8.4 106 86-208 178-288 (461)
91 3inp_A D-ribulose-phosphate 3- 34.4 29 0.00099 30.2 3.5 54 100-154 108-161 (246)
92 3g8r_A Probable spore coat pol 34.2 1.1E+02 0.0037 28.0 7.5 91 110-207 74-167 (350)
93 2ox4_A Putative mandelate race 34.2 1E+02 0.0035 28.3 7.6 74 85-159 218-293 (403)
94 1tkk_A Similar to chloromucona 34.0 1.1E+02 0.0039 27.6 7.7 72 85-157 194-269 (366)
95 1tqx_A D-ribulose-5-phosphate 34.0 29 0.001 29.7 3.4 52 102-153 86-142 (227)
96 3gr4_A Pyruvate kinase isozyme 32.9 1.9E+02 0.0064 28.2 9.2 105 87-208 240-347 (550)
97 3dg3_A Muconate cycloisomerase 32.9 63 0.0021 29.5 5.8 75 84-159 193-269 (367)
98 2akz_A Gamma enolase, neural; 32.7 87 0.003 29.5 6.8 73 87-159 270-345 (439)
99 1vs1_A 3-deoxy-7-phosphoheptul 31.8 97 0.0033 27.3 6.6 89 113-208 88-179 (276)
100 1vr6_A Phospho-2-dehydro-3-deo 31.3 79 0.0027 28.9 6.0 88 113-207 156-246 (350)
101 3nvt_A 3-deoxy-D-arabino-heptu 30.6 1.5E+02 0.0052 27.3 8.0 103 101-210 169-286 (385)
102 1e0t_A Pyruvate kinase, PK; ph 30.5 2.2E+02 0.0076 27.0 9.2 105 87-208 170-278 (470)
103 1wue_A Mandelate racemase/muco 30.0 48 0.0016 30.5 4.5 71 86-158 212-284 (386)
104 1rvk_A Isomerase/lactonizing e 30.0 1.1E+02 0.0038 27.8 7.0 72 86-157 210-283 (382)
105 1tqj_A Ribulose-phosphate 3-ep 29.9 69 0.0024 27.1 5.2 53 100-153 84-138 (230)
106 3t05_A Pyruvate kinase, PK; te 29.6 2.1E+02 0.0071 28.3 9.0 106 86-208 190-298 (606)
107 3hqn_D Pyruvate kinase, PK; TI 28.8 2.9E+02 0.01 26.5 9.7 105 87-208 190-297 (499)
108 2pgw_A Muconate cycloisomerase 28.7 1.2E+02 0.004 27.7 6.9 73 85-158 199-273 (384)
109 3o1n_A 3-dehydroquinate dehydr 28.4 2.4E+02 0.0082 24.6 8.6 42 92-133 122-165 (276)
110 1zco_A 2-dehydro-3-deoxyphosph 28.2 1E+02 0.0036 26.8 6.1 91 113-210 73-167 (262)
111 3dgb_A Muconate cycloisomerase 28.2 79 0.0027 29.0 5.6 73 85-158 203-277 (382)
112 3stp_A Galactonate dehydratase 27.6 93 0.0032 29.0 6.0 76 84-160 238-315 (412)
113 3iev_A GTP-binding protein ERA 27.5 2.8E+02 0.0094 24.2 9.0 111 21-135 8-130 (308)
114 2zad_A Muconate cycloisomerase 27.2 1.4E+02 0.0047 26.7 7.0 72 85-157 191-266 (345)
115 2ale_A SNU13, NHP2/L7AE family 26.9 96 0.0033 24.1 5.0 35 101-135 48-83 (134)
116 1vli_A Spore coat polysacchari 26.8 70 0.0024 29.7 4.9 91 111-208 98-191 (385)
117 3gg8_A Pyruvate kinase; malari 26.2 2.6E+02 0.0087 27.0 8.8 106 86-208 204-313 (511)
118 2chr_A Chloromuconate cycloiso 26.2 67 0.0023 29.2 4.7 74 85-159 197-272 (370)
119 1nu5_A Chloromuconate cycloiso 26.0 76 0.0026 28.8 5.1 71 86-157 198-270 (370)
120 3rcy_A Mandelate racemase/muco 25.9 1E+02 0.0034 29.0 5.9 75 84-159 211-287 (433)
121 2zc8_A N-acylamino acid racema 25.7 75 0.0026 28.8 4.9 70 86-157 192-263 (369)
122 4a29_A Engineered retro-aldol 25.6 3.3E+02 0.011 23.6 10.6 98 98-207 123-232 (258)
123 3u9i_A Mandelate racemase/muco 25.5 89 0.003 28.9 5.4 73 84-157 225-301 (393)
124 2al1_A Enolase 1, 2-phospho-D- 25.2 1.2E+02 0.004 28.6 6.2 73 87-159 273-348 (436)
125 3mwc_A Mandelate racemase/muco 25.1 83 0.0028 29.1 5.1 74 84-159 213-288 (400)
126 3i6e_A Muconate cycloisomerase 24.9 80 0.0027 29.0 5.0 73 85-158 201-275 (385)
127 2gl5_A Putative dehydratase pr 24.5 87 0.003 28.9 5.2 69 86-155 228-298 (410)
128 3j21_Z 50S ribosomal protein L 23.4 1.5E+02 0.0051 21.4 5.3 33 100-132 30-62 (99)
129 3cpq_A 50S ribosomal protein L 23.3 1.2E+02 0.0041 22.4 4.9 33 100-132 36-68 (110)
130 3ugv_A Enolase; enzyme functio 23.3 1.6E+02 0.0055 27.0 6.7 75 84-159 227-303 (390)
131 2dha_A FLJ20171 protein; RRM d 22.5 1.3E+02 0.0044 22.7 5.0 43 5-47 7-49 (123)
132 4h1z_A Enolase Q92ZS5; dehydra 21.9 2.2E+02 0.0076 26.2 7.5 73 84-157 240-314 (412)
133 4dye_A Isomerase; enolase fami 21.8 2.6E+02 0.0087 25.7 7.8 73 84-159 220-294 (398)
134 3fcp_A L-Ala-D/L-Glu epimerase 21.5 76 0.0026 29.1 4.1 72 85-157 202-275 (381)
135 3i4k_A Muconate lactonizing en 21.3 65 0.0022 29.6 3.6 70 85-155 203-274 (383)
136 2pa6_A Enolase; glycolysis, ly 21.3 1.5E+02 0.005 27.6 6.1 64 96-159 277-342 (427)
137 3gd6_A Muconate cycloisomerase 21.2 1.4E+02 0.0047 27.4 5.8 71 85-158 196-270 (391)
138 1w41_A 50S ribosomal protein L 21.1 1.3E+02 0.0045 21.7 4.6 33 100-132 31-63 (101)
139 3f4w_A Putative hexulose 6 pho 21.1 90 0.0031 25.5 4.1 57 100-156 76-134 (211)
140 2pge_A MENC; OSBS, NYSGXRC, PS 21.1 69 0.0024 29.3 3.7 64 95-158 227-293 (377)
141 3tj4_A Mandelate racemase; eno 21.0 2.3E+02 0.0078 25.7 7.2 72 84-156 205-278 (372)
142 3cu2_A Ribulose-5-phosphate 3- 20.7 93 0.0032 26.7 4.2 54 100-154 91-153 (237)
143 2p8b_A Mandelate racemase/muco 20.5 1E+02 0.0036 27.8 4.8 70 87-157 196-268 (369)
144 1w6t_A Enolase; bacterial infe 20.3 1.6E+02 0.0055 27.6 6.2 73 87-159 279-356 (444)
145 3qld_A Mandelate racemase/muco 20.0 1.2E+02 0.0042 27.8 5.2 72 86-159 200-273 (388)
146 1jw9_B Molybdopterin biosynthe 20.0 3.9E+02 0.013 22.4 10.2 36 97-133 117-152 (249)
No 1
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=3.3e-40 Score=309.56 Aligned_cols=253 Identities=24% Similarity=0.313 Sum_probs=220.6
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++.+.+..+
T Consensus 38 ~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~- 116 (328)
T 3kzh_A 38 KISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADM- 116 (328)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEEC-
T ss_pred EEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEch-
Confidence 4679999999999999999999999999999999999999999999999888878888999999999999998766543
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
.+...+++++++...+.++.++++++++.++ +.+..+++ +++.++++++|+++....+.+.++++++|++++|++|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~ 194 (328)
T 3kzh_A 117 KSIGAMNTDFIDSKREIFENAEYTVLDSDNP-EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAE 194 (328)
T ss_dssp GGGGGCCHHHHHHTHHHHHTCSEEEEESSCH-HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHH
T ss_pred hhhhhCCHHHHHHHHHhhccCCEEEEeCCcH-HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHH
Confidence 3445688888887677889999999999876 77777777 888999999999886655677889999999999999999
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
.+++... .+.++ ++++++.|.+.|++.||||+|++|++++.+++
T Consensus 195 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------------------- 238 (328)
T 3kzh_A 195 ILAGFPI------------TDTDD----LIKASNYFLGLGIKKVFISLDADGIFYNDGVS-------------------- 238 (328)
T ss_dssp HHHTSCC------------CSHHH----HHHHHHHHHHHTCCEEEEECGGGCEEEECSSC--------------------
T ss_pred HHHCCCC------------CCHHH----HHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCc--------------------
Confidence 9987421 11222 35667888888999999999999999987654
Q ss_pred cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHH
Q 036840 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++.
T Consensus 239 --------------------------~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~ 290 (328)
T 3kzh_A 239 --------------------------CGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISH 290 (328)
T ss_dssp --------------------------EEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred --------------------------eEEecCCCcccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 7888999999999999999999999999999999999999999999998864
No 2
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=6e-40 Score=304.04 Aligned_cols=252 Identities=19% Similarity=0.317 Sum_probs=221.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+.++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++++.+..
T Consensus 36 ~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-- 113 (304)
T 3ry7_A 36 KAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYG-- 113 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEEC--
T ss_pred eecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEec--
Confidence 568999999999999999999999999999999999999999999999999888888999999999988998876543
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
+++..+++++++.+.+.++++++++++++.+.+.+..+++.+++.++++++|++... +...++++++|++++|++|+.
T Consensus 114 ga~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~--~~~~~ll~~~dil~~N~~E~~ 191 (304)
T 3ry7_A 114 GANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAK--ALPNELLSLIDIIVPNETEAE 191 (304)
T ss_dssp GGGGGCCHHHHHTTHHHHHTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCSCC--CCCHHHHTTCSEECCBHHHHH
T ss_pred CchhcCCHHHHHHHHHHhccCCEEEEcCCCCHHHHHHHHHHHHHcCCEEEEeCCccc--cccHHHHHhCCEEecCHHHHH
Confidence 345678999988766778999999999988889999999999999999999997632 345678899999999999999
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
.+++... .+.++ ++++++.|++.|++.|+||+|++|++++.+++
T Consensus 192 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------------------- 235 (304)
T 3ry7_A 192 LLSGIKV------------TNEQS----MKDNANYFLSIGIKTVLITLGKQGTYFATKNQ-------------------- 235 (304)
T ss_dssp HHHSCCC------------CSHHH----HHHHHHHHHHTTCCEEEEECGGGCEEEECSSC--------------------
T ss_pred HHhCCCC------------CChhH----HHHHHHHHHHcCCCEEEEEeCCCceEEEECCe--------------------
Confidence 9987521 11222 36677888888999999999999999987654
Q ss_pred cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcC-CCchhhcccchHHHHHHHHH
Q 036840 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG-LDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g-~~~~~al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+|||+++|++| +++++|+++|+++++++++.
T Consensus 236 --------------------------~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~ 288 (304)
T 3ry7_A 236 --------------------------SQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQK 288 (304)
T ss_dssp --------------------------EEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCC
T ss_pred --------------------------eEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999999999 99999999999999988764
No 3
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2e-39 Score=302.89 Aligned_cols=252 Identities=27% Similarity=0.343 Sum_probs=215.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++++ ...++.+|+.++++++++|++++.+.+.
T Consensus 35 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~- 112 (317)
T 2nwh_A 35 MEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADM- 112 (317)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEEC-
T ss_pred EEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcch-
Confidence 46789999999999999999999999999999999999999999999998 5666779999999999899998765543
Q ss_pred hhcccCCHHHHHHHH--hhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHH
Q 036840 82 SIEKFLTPDWIRQFI--HHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~--~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E 159 (327)
..+..+++++++... +.++.+++++++++++.+.+..+++.+++.+++++||++..+..+.+.++++++|++++|++|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~ll~~~dil~~N~~E 192 (317)
T 2nwh_A 113 DLYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIARACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAE 192 (317)
T ss_dssp GGGGGCCHHHHTSHHHHHHHHHCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEECCSHHHHGGGTTTGGGCSEEEEEHHH
T ss_pred HHHhhCCHHHhhhhhhhhHhccCCEEEEeCCCCHHHHHHHHHHHHhcCCeEEEeCCCHHHHHHHHHHhhhCeEecCCHHH
Confidence 334458888776544 678899999999888888999999999999999999998765556677889999999999999
Q ss_pred HHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcc
Q 036840 160 LVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSR 239 (327)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
+..|++.. .+ .++++++.|.+.|++.||||+|++|++++.+++.
T Consensus 193 ~~~l~g~~---------------~~----~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~----------------- 236 (317)
T 2nwh_A 193 ARALTGET---------------AE----NVRDWPNILRKAGLSGGVVTRGASEVVAFNGTEK----------------- 236 (317)
T ss_dssp HHHHHC------------------------CTTHHHHHHHTTCCCEEEEETTTEEEEECSSCE-----------------
T ss_pred HHHHhCCC---------------hh----HHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCc-----------------
Confidence 99987640 01 1134567777889999999999999998865431
Q ss_pred cccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHH
Q 036840 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++.
T Consensus 237 ----------------------------~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 288 (317)
T 2nwh_A 237 ----------------------------AILHPPLIREVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQS 288 (317)
T ss_dssp ----------------------------EEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSS
T ss_pred ----------------------------eEEeCCCCccccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 5788999999999999999999999999999999999999999999998865
No 4
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=5.9e-39 Score=298.18 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=217.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++++.+..
T Consensus 37 ~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-- 114 (309)
T 1rkd_A 37 QVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHA-- 114 (309)
T ss_dssp EEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEEC--
T ss_pred eecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeC--
Confidence 357899999999999999999999999999999999999999999999999887788999999999988999876643
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
+.+..+++++++.+.+.+++++++++++..+.+.+..+++.+++.++++++|++... ....++++++|++++|++|+.
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~ll~~~dil~~N~~E~~ 192 (309)
T 1rkd_A 115 GANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPAR--ELPDELLALVDIITPNETEAE 192 (309)
T ss_dssp GGGGGCCHHHHHTTHHHHHHCSEEEECSSSCHHHHHHHHHHHHHTTCEEEECCCSCC--CCCHHHHTTCSEECCCHHHHH
T ss_pred CchhcCCHHHHHHHHHhcccCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEEECCccc--cchHHHHhhCCEEEcCHHHHH
Confidence 335568999887655678899999999988888889999999999999999998642 223467899999999999999
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
.|++... .+.++ ++++++.|.+.|++.||||+|++|++++++++
T Consensus 193 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------------------- 236 (309)
T 1rkd_A 193 KLTGIRV------------ENDED----AAKAAQVLHEKGIRTVLITLGSRGVWASVNGE-------------------- 236 (309)
T ss_dssp HHHSCCC------------SSHHH----HHHHHHHHHHTTCSEEEEECGGGCEEEEETTE--------------------
T ss_pred HHhCCCC------------CCHHH----HHHHHHHHHHhCCCEEEEEECCCcEEEEeCCc--------------------
Confidence 9887411 11222 35667788888999999999999998886543
Q ss_pred cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHH
Q 036840 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++.
T Consensus 237 --------------------------~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 237 --------------------------GQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTR 288 (309)
T ss_dssp --------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred --------------------------eEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 6788999999999999999999999999999999999999999999998865
No 5
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=1.1e-39 Score=306.26 Aligned_cols=248 Identities=19% Similarity=0.249 Sum_probs=208.7
Q ss_pred eecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecchh
Q 036840 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVES 82 (327)
Q Consensus 3 ~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~~ 82 (327)
.++||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++++.+....+
T Consensus 34 ~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~ 113 (330)
T 3iq0_A 34 PYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNA 113 (330)
T ss_dssp EEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTS
T ss_pred cCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCC
Confidence 46899999999999999999999999999999999999999999999999888888999999999988998655554444
Q ss_pred hcccCCHHHHHHHHhhhcCCcEEEEecCCC-----HHHHHHHHHHHHhCCCCEEEecCchh-------hhhhhhcccccc
Q 036840 83 IEKFLTPDWIRQFIHHISSASVLMVDANLS-----PPALAASCKIAAECNIPVWFEPVSVT-------KSRRITSVVKYI 150 (327)
Q Consensus 83 ~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~-----~~~~~~l~~~a~~~~~~v~~d~~~~~-------~~~~~~~~l~~~ 150 (327)
+...++++++.. ..+++++++|+++... .+.+..+++.+++.++++++|++... ..+.+.++++++
T Consensus 114 a~~~~~~~~~~~--~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~ 191 (330)
T 3iq0_A 114 ACGKLSAQHVDE--NILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELT 191 (330)
T ss_dssp GGGGCCGGGCCG--GGGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTC
T ss_pred hhhhCCHhhCCH--hHhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhC
Confidence 555677776653 4678999999987432 34577888899999999999998642 234567788999
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
|++++|++|+..+++. . ..+++++.|++.|++.||||+|++|++++.+++
T Consensus 192 dil~~N~~E~~~l~g~--------------~-------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~--------- 241 (330)
T 3iq0_A 192 DIYMPSEGEVLLLSPH--------------S-------TPERAIAGFLEEGVKEVIVKRGNQGASYYSANE--------- 241 (330)
T ss_dssp SEECCBGGGTTTTCSC--------------S-------SHHHHHHHHHHHTCSEEEEECGGGCEEEECSSC---------
T ss_pred CEEecCHHHHHHHhCC--------------C-------CHHHHHHHHHHcCCCEEEEEeCCCceEEEECCc---------
Confidence 9999999999876542 1 125567788888999999999999999987654
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 242 -------------------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 284 (330)
T 3iq0_A 242 -------------------------------------QFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYAN 284 (330)
T ss_dssp -------------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -------------------------------------eEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 036840 311 AKTVYAAAN 319 (327)
Q Consensus 311 aa~~~~~~~ 319 (327)
+++++.++.
T Consensus 285 ~~aa~~v~~ 293 (330)
T 3iq0_A 285 ACGALAVTR 293 (330)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHcC
Confidence 999998764
No 6
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-38 Score=298.81 Aligned_cols=253 Identities=24% Similarity=0.317 Sum_probs=217.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++++.+..
T Consensus 57 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~-- 134 (331)
T 2fv7_A 57 FIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVA-- 134 (331)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEEC--
T ss_pred EECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecC--
Confidence 357899999999999999999999999999999999999999999999999887778999999999988999876653
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
+++..+++++++...+.++.++++++++..+.+.+..+++.+++.++++++|++... .....++++++|++++|++|+.
T Consensus 135 ga~~~l~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-~~~~~~ll~~~dil~~N~~Ea~ 213 (331)
T 2fv7_A 135 GANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAPAI-ADLDPQFYTLSDVFCCNESEAE 213 (331)
T ss_dssp GGGGGCCHHHHHHTHHHHHHCSEEEECSSSCHHHHHHHHHHHHHTTCEEEECCCSCC-TTCCTHHHHTCSEEEEEHHHHH
T ss_pred CccccCCHHHHHHHHHhhccCCEEEEecCCCHHHHHHHHHHHHHcCCEEEEeCCccc-ccchHHHHhcCCEEEeCHHHHH
Confidence 334568998887655667889999999888888888999999999999999998642 1234567899999999999999
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEec--cchhhhhcccCCCCCCCcc
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKE--LLSSMRIGLRKTKPYGFSR 239 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~ 239 (327)
.|++... .+.++ ++++++.|.+.|++.||||+|++|++++.++ .
T Consensus 214 ~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~------------------ 259 (331)
T 2fv7_A 214 ILTGLTV------------GSAAD----AGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPE------------------ 259 (331)
T ss_dssp HHHSSCC------------CSHHH----HHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCS------------------
T ss_pred HHhCCCC------------CChhH----HHHHHHHHHHcCCCEEEEEECCCceEEEECCCCc------------------
Confidence 9877411 11222 3566778888899999999999999988664 3
Q ss_pred cccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcC--CCchhhcccchHHHHHHH
Q 036840 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG--LDVMQSVAVDDAKTVYAA 317 (327)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g--~~~~~al~~a~aa~~~~~ 317 (327)
.+++|+++++++|||||||+|+|||+++|++| +++++|+++|++++++.+
T Consensus 260 ----------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v 311 (331)
T 2fv7_A 260 ----------------------------PKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSV 311 (331)
T ss_dssp ----------------------------CEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------eeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHh
Confidence 67889998999999999999999999999999 999999999999999988
Q ss_pred HH
Q 036840 318 AN 319 (327)
Q Consensus 318 ~~ 319 (327)
+.
T Consensus 312 ~~ 313 (331)
T 2fv7_A 312 QA 313 (331)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 7
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=1.6e-39 Score=305.88 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=201.6
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+.++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|+|++.+....
T Consensus 32 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~ 111 (338)
T 3ljs_A 32 LQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPP 111 (338)
T ss_dssp EEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSS
T ss_pred eecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCC
Confidence 46799999999999999999999999999999999999999999999999988888899999999998899987665444
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCchh--------hhhhhhcccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSVT--------KSRRITSVVK 148 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~~--------~~~~~~~~l~ 148 (327)
+++..+++++++. +.+++++++|+++. .+.+.+..+++.+++.+++++||++.+. ..+.+.++++
T Consensus 112 ~a~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~ 189 (338)
T 3ljs_A 112 AADLLFRVEHFQD--ASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLS 189 (338)
T ss_dssp CGGGGCCGGGCCH--HHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHH
T ss_pred ChhHhCCHhhcCH--hHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHh
Confidence 5555677777654 45788999999762 1346788889999999999999997431 2345677889
Q ss_pred cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhc
Q 036840 149 YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIG 228 (327)
Q Consensus 149 ~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 228 (327)
++|++++|++|++.|++... +++ +++++.|++.|++.||||+|++|++++.+++
T Consensus 190 ~~dil~~N~~E~~~l~g~~~--------------~~~-----~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~------- 243 (338)
T 3ljs_A 190 LADVVKLSSEELDYLANTLA--------------ADA-----NAVIQQLWQGRAQLLLVTDAAGPVHWYTRTA------- 243 (338)
T ss_dssp TCSEEEEEHHHHHHHHHHHT--------------SCH-----HHHHHHHTTTTCCEEEEEETTEEEEEEESSC-------
T ss_pred hCCEEEecHHHHHHHhCCCC--------------hhH-----HHHHHHHHhcCCCEEEEeeCCCceEEEECCc-------
Confidence 99999999999999988621 111 2356778888999999999999999987654
Q ss_pred ccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcC---------
Q 036840 229 LRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG--------- 299 (327)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g--------- 299 (327)
.+++|+++++++|||||||+|+|||+++|++|
T Consensus 244 ---------------------------------------~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~ 284 (338)
T 3ljs_A 244 ---------------------------------------GGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALID 284 (338)
T ss_dssp ---------------------------------------EEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHH
T ss_pred ---------------------------------------eEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhc
Confidence 78899999999999999999999999999999
Q ss_pred -----CCchhhcccchHHHHHHHHHH
Q 036840 300 -----LDVMQSVAVDDAKTVYAAANV 320 (327)
Q Consensus 300 -----~~~~~al~~a~aa~~~~~~~~ 320 (327)
+++++|+++|+++++++++..
T Consensus 285 ~~~~~~~l~~al~~A~~~aa~~v~~~ 310 (338)
T 3ljs_A 285 FCHDPESIVSTLRFAAAVGALAVTRQ 310 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHGGGC---
T ss_pred cccChHHHHHHHHHHHHHHHHHhCCC
Confidence 899999999999999987653
No 8
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=7.6e-39 Score=299.00 Aligned_cols=252 Identities=17% Similarity=0.171 Sum_probs=208.1
Q ss_pred ceecCCchHHHHHHHHHcC----CCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEE
Q 036840 2 NYVLGGVARNVAECMSKLG----SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAV 77 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG----~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~ 77 (327)
+..+||+++|+|.+|++|| .++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|+|++.+
T Consensus 25 ~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~ 104 (319)
T 3lhx_A 25 KRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYY 104 (319)
T ss_dssp EEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEE
T ss_pred EEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEE
Confidence 5689999999999999999 899999999999999999999999999999998888888999999998889998876
Q ss_pred ecchh-hcccCCHHHHHHHHhhhcCCcEEEEecC----CC---HHHHHHHHHHHHhCCCCEEEecCchh--------hhh
Q 036840 78 ASVES-IEKFLTPDWIRQFIHHISSASVLMVDAN----LS---PPALAASCKIAAECNIPVWFEPVSVT--------KSR 141 (327)
Q Consensus 78 ~~~~~-~~~~l~~~~i~~~~~~l~~~~~v~~~g~----~~---~~~~~~l~~~a~~~~~~v~~d~~~~~--------~~~ 141 (327)
..... .+..+++++++.+.+.+++++++|+++. ++ .+.+..+++.+++.++++++|++... ..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~ 184 (319)
T 3lhx_A 105 WRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQ 184 (319)
T ss_dssp ECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHH
T ss_pred ecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHH
Confidence 54322 2334666666666678899999999862 22 25778889999999999999997531 124
Q ss_pred hhhcccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEecc
Q 036840 142 RITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKEL 221 (327)
Q Consensus 142 ~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 221 (327)
.+.++++++|++++|++|++.+++. . .++++++.|.+.|++.||||+|++|++++.+++
T Consensus 185 ~~~~ll~~~di~~~n~~E~~~l~g~--------------~-------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 243 (319)
T 3lhx_A 185 VYQQMLECTDIAFLTLDDEDALWGQ--------------Q-------PVEDVIARTHNAGVKEVVVKRGADSCLVSIAGE 243 (319)
T ss_dssp HHHHHHTTCSEEEEEHHHHHHHHCC--------------C-------CHHHHHHHHHHTTCSEEEEEETTEEEEEEETTS
T ss_pred HHHHHHhhCCcccCCHHHHHHHhCC--------------C-------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCc
Confidence 5677899999999999999988763 1 125667788889999999999999999987654
Q ss_pred chhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCC---CCcccccCCCchhHHHHHHHHHHc
Q 036840 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPAL---PASVVRLTGAGDCLVGGTLASISS 298 (327)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~vvdttGAGDaF~ag~l~~l~~ 298 (327)
. ..++|++ +++++|||||||+|+|||+++|++
T Consensus 244 ~---------------------------------------------~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 278 (319)
T 3lhx_A 244 A---------------------------------------------LVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT 278 (319)
T ss_dssp C---------------------------------------------CEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTT
T ss_pred c---------------------------------------------eEEcccccCCCCccCCCCCccHHHHHHHHHHHHc
Confidence 1 3478886 568999999999999999999999
Q ss_pred CCCchhhcccchHHHHHHHHH
Q 036840 299 GLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 299 g~~~~~al~~a~aa~~~~~~~ 319 (327)
|+++++|+++|++++++.++.
T Consensus 279 g~~~~~a~~~A~~~aa~~v~~ 299 (319)
T 3lhx_A 279 GGSAENAAKRGHLTASTVIQY 299 (319)
T ss_dssp TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHhhhcc
Confidence 999999999999999998764
No 9
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=5.4e-38 Score=299.54 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=214.3
Q ss_pred ceecCCchHHHHHHHHHc---CCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEe
Q 036840 2 NYVLGGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~L---G~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~ 78 (327)
+..+||++.|+|.+|++| |.++.++|.+|+|.+|+.+++.|++.||+++++...++.+|+.++++++ +|+|++...
T Consensus 77 ~~~~GG~~~N~A~~la~L~~~G~~~~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~ 155 (370)
T 3vas_A 77 NYIAGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY 155 (370)
T ss_dssp EEEEECHHHHHHHHHHHHHCCTTCEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE
T ss_pred EEecCCHHHHHHHHHHHhcCCCCcEEEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc
Confidence 568999999999999999 9999999999999999999999999999999887756779999999998 889887654
Q ss_pred cchhhcccCCHHHHHH--HHhhhcCCcEEEEecCC---CHHHHHHHHHHHHhCCCCEEEecCchhh----hhhhhccccc
Q 036840 79 SVESIEKFLTPDWIRQ--FIHHISSASVLMVDANL---SPPALAASCKIAAECNIPVWFEPVSVTK----SRRITSVVKY 149 (327)
Q Consensus 79 ~~~~~~~~l~~~~i~~--~~~~l~~~~~v~~~g~~---~~~~~~~l~~~a~~~~~~v~~d~~~~~~----~~~~~~~l~~ 149 (327)
. +++..+++++++. +.+.+.+++++|+++.. +.+.+..+++.+++.++++++|++.... .+.+.+++++
T Consensus 156 ~--ga~~~l~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~ 233 (370)
T 3vas_A 156 L--GAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISY 233 (370)
T ss_dssp E--EGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTT
T ss_pred c--chhhhCCHHHcCchhhHHHHhhCCEEEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhh
Confidence 2 3456688888764 34578899999998743 4678889999999999999999975321 3567789999
Q ss_pred ceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc-------CCCEEEEEeCCCceEEEE--ec
Q 036840 150 ITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK-------GIRLVVLTLGSDGVLLCS--KE 220 (327)
Q Consensus 150 ~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~ 220 (327)
+|++++|++|+..|++....+ .++ ++++++.|.+. +++.||||+|++|++++. .+
T Consensus 234 ~dil~~N~~Ea~~l~g~~~~~------------~~~----~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~ 297 (370)
T 3vas_A 234 SNIVFGNESEAEAYGEVHGLL------------EDT----VHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDS 297 (370)
T ss_dssp CSEEEEEHHHHHHHHHHTTCC------------SSH----HHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCS
T ss_pred CCEEEcCHHHHHHHhcccCCC------------ccC----HHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCC
Confidence 999999999999999863211 112 35667778774 899999999999999987 44
Q ss_pred cchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC---cccccCCCchhHHHHHHHHHH
Q 036840 221 LLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASIS 297 (327)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vvdttGAGDaF~ag~l~~l~ 297 (327)
. .+++|++++ +++|||||||+|+|||+++|+
T Consensus 298 ~----------------------------------------------~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~ 331 (370)
T 3vas_A 298 E----------------------------------------------IHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYI 331 (370)
T ss_dssp S----------------------------------------------CEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHT
T ss_pred e----------------------------------------------EEEEecccccCCCcCCCCChHHHHHHHHHHHHH
Confidence 3 678888876 899999999999999999999
Q ss_pred cCCCchhhcccchHHHHHHHHH
Q 036840 298 SGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 298 ~g~~~~~al~~a~aa~~~~~~~ 319 (327)
+|+++++|+++|++++++.++.
T Consensus 332 ~g~~l~~a~~~A~aaAa~~v~~ 353 (370)
T 3vas_A 332 RGKPMITSLHAAVKAAAYIICR 353 (370)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999998865
No 10
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.5e-38 Score=299.38 Aligned_cols=250 Identities=21% Similarity=0.213 Sum_probs=203.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCE-EEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGEL-AAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~-~~~~~~~ 80 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++++|++ .+.+...
T Consensus 54 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~ 133 (336)
T 4du5_A 54 HKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRK 133 (336)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECT
T ss_pred eecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECC
Confidence 467999999999999999999999999999999999999999999999999888888999999998888844 4445444
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCC---C---HHHHHHHHHHHHhCCCCEEEecCch---h-----hhhhhhcc
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANL---S---PPALAASCKIAAECNIPVWFEPVSV---T-----KSRRITSV 146 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~---~---~~~~~~l~~~a~~~~~~v~~d~~~~---~-----~~~~~~~~ 146 (327)
.++...+++++++. +.+++++++++++.. + .+.+..+++.+++.++++++|++.+ | ..+.+.++
T Consensus 134 ~~a~~~l~~~~~~~--~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~l 211 (336)
T 4du5_A 134 GSAASHMGVADIDE--AWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDL 211 (336)
T ss_dssp TCTGGGCCGGGCCH--HHHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHH
T ss_pred CChhHhCChhhCCH--hHhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHH
Confidence 45556678777654 467899999998732 2 2567788899999999999999832 1 12456778
Q ss_pred cccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhh
Q 036840 147 VKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMR 226 (327)
Q Consensus 147 l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~ 226 (327)
++++|++++|++|++.|++. .+ .+++++.|.+.|++.||||+|++|++++.+++
T Consensus 212 l~~~dil~pN~~Ea~~l~g~--------------~~-------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~----- 265 (336)
T 4du5_A 212 ATRADWVLPGMEEGRFLTGE--------------TT-------PEGVARFYRQLGAKLVVVKLGAEGAYFDGEAG----- 265 (336)
T ss_dssp HTTCSEECCBHHHHHHHHCC--------------CS-------HHHHHHHHHHTTCSEEEEECGGGCEEEEETTE-----
T ss_pred HHhCCEEECCHHHHHHHhCC--------------CC-------HHHHHHHHHhcCCCEEEEEecCCceEEEECCe-----
Confidence 89999999999999998763 11 25567788888999999999999999986544
Q ss_pred hcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCc-ccccCCCchhHHHHHHHHHHcCCCchhh
Q 036840 227 IGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVMQS 305 (327)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vvdttGAGDaF~ag~l~~l~~g~~~~~a 305 (327)
.+++|+++++ ++||+||||+|+|||+++|++|+++++|
T Consensus 266 -----------------------------------------~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~l~~a 304 (336)
T 4du5_A 266 -----------------------------------------SGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEA 304 (336)
T ss_dssp -----------------------------------------EEEECCCCC-------CHHHHHHHHHHHHHHTTCCHHHH
T ss_pred -----------------------------------------EEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCCHHHH
Confidence 7889999997 9999999999999999999999999999
Q ss_pred cccchHHHHHHHHHH
Q 036840 306 VAVDDAKTVYAAANV 320 (327)
Q Consensus 306 l~~a~aa~~~~~~~~ 320 (327)
+++|+++++++++..
T Consensus 305 ~~~A~~~aa~~v~~~ 319 (336)
T 4du5_A 305 VKRGAWIGARAVQVL 319 (336)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999998764
No 11
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=9.3e-38 Score=294.91 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=211.7
Q ss_pred ceecCCchHHHHHHHHHc----CCC-ceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEE
Q 036840 2 NYVLGGVARNVAECMSKL----GSK-PYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAA 76 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~L----G~~-v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~ 76 (327)
+..+||++.|+|.++++| |.+ +.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++.
T Consensus 60 ~~~~GG~~~N~a~~la~L~~~~G~~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~ 137 (347)
T 3otx_A 60 RYVPGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLV 137 (347)
T ss_dssp EEEECCHHHHHHHHHHHTTGGGTTSSEEEECEECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEE
T ss_pred EEecCCHHHHHHHHHHHhcccCCCCeEEEEEEecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeee
Confidence 568999999999999999 999 9999999999999999999999999999875 56778999999988 8888765
Q ss_pred EecchhhcccCCHHHHHH--HHhhhcCCcEEEEecC---CCHHHHHHHHHHHHhCCCCEEEecCchhh----hhhhhccc
Q 036840 77 VASVESIEKFLTPDWIRQ--FIHHISSASVLMVDAN---LSPPALAASCKIAAECNIPVWFEPVSVTK----SRRITSVV 147 (327)
Q Consensus 77 ~~~~~~~~~~l~~~~i~~--~~~~l~~~~~v~~~g~---~~~~~~~~l~~~a~~~~~~v~~d~~~~~~----~~~~~~~l 147 (327)
.. .++...+++++++. +.+.+++++++|+++. .+.+.+..+++.+++.++++++|++.... .+.+.+++
T Consensus 138 ~~--~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l 215 (347)
T 3otx_A 138 AD--LGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVL 215 (347)
T ss_dssp EE--EEGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHG
T ss_pred ec--hhhhhcCCHHHcCchhhHHHHhhCCEEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHH
Confidence 43 23345688888753 3457889999999873 56788999999999999999999985322 35678899
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHH------HcCCCEEEEEeCCCceEEEEecc
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLL------EKGIRLVVLTLGSDGVLLCSKEL 221 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~ 221 (327)
+++|++++|++|++.+++...... . .++++++.|. +.+++.||||+|++|++++++++
T Consensus 216 ~~~dil~~N~~Ea~~l~~~~~~~~---------~-------~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~ 279 (347)
T 3otx_A 216 PYTDIIVANRHEAKEFANMMKWDT---------D-------CVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDG 279 (347)
T ss_dssp GGCSEEEEEHHHHHHHHHHHTCCC---------C-------CHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTE
T ss_pred hhCCEEecCHHHHHHHhcccCCCc---------C-------CHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCe
Confidence 999999999999999998643210 1 1255566776 36899999999999999987654
Q ss_pred chhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC---cccccCCCchhHHHHHHHHHHc
Q 036840 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASISS 298 (327)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vvdttGAGDaF~ag~l~~l~~ 298 (327)
.+++|++++ ++||||||||+|+|||+++|++
T Consensus 280 ----------------------------------------------~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~ 313 (347)
T 3otx_A 280 ----------------------------------------------VETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAV 313 (347)
T ss_dssp ----------------------------------------------EEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTT
T ss_pred ----------------------------------------------EEEEEecccCCCCCCCCCChHHHHHHHHHHHHHc
Confidence 677888776 7999999999999999999999
Q ss_pred CCCchhhcccchHHHHHHHHH
Q 036840 299 GLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 299 g~~~~~al~~a~aa~~~~~~~ 319 (327)
|+++++|+++|+++++++++.
T Consensus 314 g~~l~~a~~~a~~~aa~~v~~ 334 (347)
T 3otx_A 314 GKDLRRCCETGHYTAQEVIQR 334 (347)
T ss_dssp TCCHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHcc
Confidence 999999999999999998865
No 12
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=2.9e-38 Score=294.77 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=206.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++.+++++++.+.++...
T Consensus 37 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 116 (319)
T 3pl2_A 37 GKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREP 116 (319)
T ss_dssp CCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCS
T ss_pred eecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCC
Confidence 46899999999999999999999999999999999999999999999999988888899999988887888776554322
Q ss_pred hh-cccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCchh--------hhhhhhccc
Q 036840 82 SI-EKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSVT--------KSRRITSVV 147 (327)
Q Consensus 82 ~~-~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~~--------~~~~~~~~l 147 (327)
.+ +..+++++++. +.+++++++|+++. .+.+....+++.+++ +.++++|++.+. ..+.+.+++
T Consensus 117 ~a~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l 193 (319)
T 3pl2_A 117 KAPDLNIESADVSL--DDVREADILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWAL 193 (319)
T ss_dssp CCGGGGCCGGGSCH--HHHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHH
T ss_pred CcccccCChhhCCH--HHhccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHH
Confidence 22 44577776642 46788999999863 223445666666655 678899997421 135567889
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhh
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 227 (327)
+++|++++|++|+..+++. .+ .+++++.|++.|++.|+||+|++|++++++++
T Consensus 194 ~~~dil~~N~~E~~~l~g~--------------~~-------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~------ 246 (319)
T 3pl2_A 194 QHSTVAVGNKEECEIAVGE--------------TE-------PERAGRALLERGVELAIVKQGPKGVMAMTKDE------ 246 (319)
T ss_dssp TTCSEEEECHHHHHHHHSC--------------CS-------HHHHHHHHHHTTCSEEEEEEETTEEEEECSSC------
T ss_pred HhCCEEEcCHHHHHHHcCC--------------CC-------HHHHHHHHHhcCCCEEEEEECCCCeEEEECCc------
Confidence 9999999999999998763 11 25567788889999999999999999987654
Q ss_pred cccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcc
Q 036840 228 GLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307 (327)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~ 307 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|++
T Consensus 247 ----------------------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 286 (319)
T 3pl2_A 247 ----------------------------------------TVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWPLEKVLR 286 (319)
T ss_dssp ----------------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ----------------------------------------eEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 7889999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHH
Q 036840 308 VDDAKTVYAAANV 320 (327)
Q Consensus 308 ~a~aa~~~~~~~~ 320 (327)
+|+++++++++..
T Consensus 287 ~A~~~aa~~v~~~ 299 (319)
T 3pl2_A 287 FANTAGALVASRL 299 (319)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998653
No 13
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=6.6e-38 Score=293.49 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=207.3
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|+|++.+.. +
T Consensus 39 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~-~ 117 (325)
T 3h49_A 39 AMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNR-N 117 (325)
T ss_dssp CCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCT-T
T ss_pred EEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEecc-C
Confidence 467899999999999999999999999999999999999999999999999888888999999999999999877643 3
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCch---h-hhhhhhcccccceE
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSV---T-KSRRITSVVKYITV 152 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~---~-~~~~~~~~l~~~dv 152 (327)
.....+++++++. +.+..++++++++. .+.+.+..+++.+++.+ .+++|++.. + ..+.+.++++++|+
T Consensus 118 ~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~di 194 (325)
T 3h49_A 118 GSLWKLNIDDVDF--ARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALSYVDY 194 (325)
T ss_dssp SHHHHCCGGGCCG--GGGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHTTCSE
T ss_pred cccccCChhhcCh--hhhccCCEEEEecccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHhhCCE
Confidence 3334466665542 46788999999872 24577889999999988 567765431 1 22456778999999
Q ss_pred EeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCC
Q 036840 153 VSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232 (327)
Q Consensus 153 v~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~ 232 (327)
+++|++|+..+++.. + .+++++.|.+.|++.||||+|++|++++.+++
T Consensus 195 l~~N~~E~~~l~g~~--------------~-------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~----------- 242 (325)
T 3h49_A 195 LFPNFAEAKLLTGKE--------------T-------LDEIADCFLACGVKTVVIKTGKDGCFIKRGDM----------- 242 (325)
T ss_dssp EECBHHHHHHHHTCS--------------S-------HHHHHHHHHTTTCSEEEEECTTSCEEEEETTE-----------
T ss_pred EecCHHHHHHHhCCC--------------C-------HHHHHHHHHHcCCCEEEEEeCCCCeEEEECCe-----------
Confidence 999999999987641 1 24556778888999999999999999987654
Q ss_pred CCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC-cccccCCCchhHHHHHHHHHHcCCCchhhcccchH
Q 036840 233 KPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDA 311 (327)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~a 311 (327)
.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 243 -----------------------------------~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 287 (325)
T 3h49_A 243 -----------------------------------TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANA 287 (325)
T ss_dssp -----------------------------------EEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -----------------------------------EEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 688899886 89999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 036840 312 KTVYAAAN 319 (327)
Q Consensus 312 a~~~~~~~ 319 (327)
+++++++.
T Consensus 288 ~aa~~v~~ 295 (325)
T 3h49_A 288 TAAISVLS 295 (325)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHcc
Confidence 99999875
No 14
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=9.3e-38 Score=293.13 Aligned_cols=248 Identities=20% Similarity=0.182 Sum_probs=207.8
Q ss_pred ceecCCchHHHHHHHHHc--CCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEec
Q 036840 2 NYVLGGVARNVAECMSKL--GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVAS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~L--G~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~ 79 (327)
+..+||++.|+|.+|++| |.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++ +|+|++.+..
T Consensus 46 ~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~ 124 (328)
T 4e69_A 46 RLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWR 124 (328)
T ss_dssp EEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEEC
T ss_pred EEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeC
Confidence 467999999999999999 8999999999999999999999999999999998888888999999999 8999887654
Q ss_pred chhhc-ccCCHHHHHHHHhhhcCCcEEEEecC----C---CHHHHHHHHHHHHhCCCCEEEecCch---h-----hhhhh
Q 036840 80 VESIE-KFLTPDWIRQFIHHISSASVLMVDAN----L---SPPALAASCKIAAECNIPVWFEPVSV---T-----KSRRI 143 (327)
Q Consensus 80 ~~~~~-~~l~~~~i~~~~~~l~~~~~v~~~g~----~---~~~~~~~l~~~a~~~~~~v~~d~~~~---~-----~~~~~ 143 (327)
..... ..++..++.. +.+++++++++++. . +.+.+..+++.+++.++++++||+.. | ..+.+
T Consensus 125 ~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~ 202 (328)
T 4e69_A 125 GQSAARELAGDADALA--AAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETI 202 (328)
T ss_dssp TTCGGGGTTSCHHHHH--HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHH
T ss_pred CCCHHHhhcCccccch--HHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHH
Confidence 33222 2234444432 57889999999862 1 23567788888999999999999742 1 23456
Q ss_pred hcccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccch
Q 036840 144 TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLS 223 (327)
Q Consensus 144 ~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~ 223 (327)
.++++++|++++|++|++.|++.. .++++++.|.+.|++.||||+|++|++++.+++
T Consensus 203 ~~ll~~~dil~~N~~E~~~l~g~~---------------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-- 259 (328)
T 4e69_A 203 MQGAAVSDIALPSFEDEAAWFGDA---------------------GPDATADRYARAGVRSVVVKNGPHAVHFLQDGR-- 259 (328)
T ss_dssp HHHHTTCSEECCBHHHHHHHHTCS---------------------SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTE--
T ss_pred HHHHHhCCEEeCCHHHHHHHcCCC---------------------CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCc--
Confidence 788999999999999999987641 125667788888999999999999999987654
Q ss_pred hhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCC-CcccccCCCchhHHHHHHHHHHcCCCc
Q 036840 224 SMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP-ASVVRLTGAGDCLVGGTLASISSGLDV 302 (327)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vvdttGAGDaF~ag~l~~l~~g~~~ 302 (327)
.+++|+++ ++++|||||||+|+|||+++|++|+++
T Consensus 260 --------------------------------------------~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~l 295 (328)
T 4e69_A 260 --------------------------------------------RGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQPL 295 (328)
T ss_dssp --------------------------------------------EEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred --------------------------------------------eEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCCH
Confidence 78889986 789999999999999999999999999
Q ss_pred hhhcccchHHHHHHHHH
Q 036840 303 MQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 303 ~~al~~a~aa~~~~~~~ 319 (327)
++|+++|++++++.++.
T Consensus 296 ~~a~~~A~~~aa~~v~~ 312 (328)
T 4e69_A 296 ETAIAAAAALAGQVVQG 312 (328)
T ss_dssp HHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99999999999998764
No 15
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=5.5e-38 Score=290.87 Aligned_cols=234 Identities=19% Similarity=0.247 Sum_probs=207.8
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++++|+|++.+..
T Consensus 35 ~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~~-- 111 (299)
T 3ikh_A 35 SQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITTT-- 111 (299)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEEC--
T ss_pred eeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEeC--
Confidence 4689999999999999999999999999999999999999999999999885 5667899999999989999876543
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
+++..+++++++.+.+.+++++++++++..+.+.+..+++.+++.++++++|++... +.+.++++++|++++|++|++
T Consensus 112 ~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~ll~~~dil~~N~~E~~ 189 (299)
T 3ikh_A 112 AAADTFSLDEMIPHMADAVAGDILLQQGNFSLDKTRALFQYARSRGMTTVFNPSPVN--PDFCHLWPLIDIAVVNESEAE 189 (299)
T ss_dssp HHHHHCCHHHHGGGGTTCCTTCEEEECSCSCHHHHHHHHHHHHHTTCEEEECCCSCC--GGGGGCGGGCSEEEEEHHHHH
T ss_pred CccccCCHHHHHHHHhhhccCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEccccch--hhHHHHHhhCCEEEecHHHHH
Confidence 345578999887766778999999999998889999999999999999999998643 456788999999999999987
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccc
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDL 241 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (327)
.|++ .|++.||||+|++|++++.+++
T Consensus 190 ~l~g----------------------------------~g~~~vvvt~G~~G~~~~~~~~-------------------- 215 (299)
T 3ikh_A 190 LLQP----------------------------------YGVKTLVITQGAAGAWLVQEGQ-------------------- 215 (299)
T ss_dssp HHCC----------------------------------CSCSEEEEECGGGCEEEECSSC--------------------
T ss_pred HHhc----------------------------------CCCCEEEEEECCCceEEEeCCc--------------------
Confidence 6521 5789999999999999986654
Q ss_pred cccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHH-HHHHHHHcCCCchh-hcccchHHHHHHHHH
Q 036840 242 YKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVG-GTLASISSGLDVMQ-SVAVDDAKTVYAAAN 319 (327)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~a-g~l~~l~~g~~~~~-al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+| ||+++|++|+++++ |+++|++++++.++.
T Consensus 216 --------------------------~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 216 --------------------------RQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSR 269 (299)
T ss_dssp --------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHS
T ss_pred --------------------------eEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCC
Confidence 78899999999999999999999 99999999999999 999999999999875
Q ss_pred H
Q 036840 320 V 320 (327)
Q Consensus 320 ~ 320 (327)
.
T Consensus 270 ~ 270 (299)
T 3ikh_A 270 R 270 (299)
T ss_dssp S
T ss_pred C
Confidence 3
No 16
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=6.1e-38 Score=297.26 Aligned_cols=246 Identities=16% Similarity=0.192 Sum_probs=209.3
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|++++++++++|+|++..+.
T Consensus 76 ~~~~GG~~~N~A~~la~LG~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~-- 153 (352)
T 4e3a_A 76 LEASGGSAGNTAAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYL-- 153 (352)
T ss_dssp EEEECCHHHHHHHHHHHHTCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEEC--
T ss_pred cEecCCHHHHHHHHHHHcCCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEecc--
Confidence 368999999999999999999999999999999999999999999999998877777999999999999999876543
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCchh----hhhhhhcccc--cc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVK--YI 150 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~--~~ 150 (327)
++...+++++++. +.+++++++|+++. .+.+.+..+++.+++.++++++|++..+ ..+.+.++++ ++
T Consensus 154 ga~~~l~~~~~~~--~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~ 231 (352)
T 4e3a_A 154 GACVELGPEDVEA--DVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKV 231 (352)
T ss_dssp GGGGGCCGGGCCH--HHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSC
T ss_pred ChhhcCChhhCCH--HHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCC
Confidence 3345677777653 56789999999874 2457788999999999999999998643 2355778888 89
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
|++++|++|+..+++. .+ ++++++.+.+ +++.||||+|++|++++.+++
T Consensus 232 dil~~N~~Ea~~l~g~--------------~~-------~~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~~--------- 280 (352)
T 4e3a_A 232 DIVFANRQEALSLYQT--------------DD-------FEEALNRIAA-DCKIAAVTMSENGAVILKGRE--------- 280 (352)
T ss_dssp CEEEEEHHHHHHHTTC--------------SC-------HHHHHHHHHH-HSSEEEEECGGGCEEEEETTE---------
T ss_pred cEEEeCHHHHHHHhCC--------------CC-------HHHHHHHHhc-CCCEEEEEECCCceEEEECCE---------
Confidence 9999999999998763 11 2444555554 788999999999999987654
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCc-ccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|
T Consensus 281 -------------------------------------~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A 323 (352)
T 4e3a_A 281 -------------------------------------RYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLG 323 (352)
T ss_dssp -------------------------------------EEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -------------------------------------EEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7889999985 89999999999999999999999999999999
Q ss_pred hHHHHHHHHH
Q 036840 310 DAKTVYAAAN 319 (327)
Q Consensus 310 ~aa~~~~~~~ 319 (327)
++++++.++.
T Consensus 324 ~~aAa~~v~~ 333 (352)
T 4e3a_A 324 CLAAGIVIQQ 333 (352)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHcC
Confidence 9999998764
No 17
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.7e-38 Score=296.48 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=207.0
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++.++.+.++.+|+.++++++++|+|++.....
T Consensus 62 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~- 140 (343)
T 2rbc_A 62 LQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD- 140 (343)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECC-
T ss_pred EEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCC-
Confidence 3578999999999999999999999999999999999999999999999998877788999999999889998754332
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhc-ccccceEEeCCHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITS-VVKYITVVSPNEDEL 160 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~-~l~~~dvv~~n~~E~ 160 (327)
.+..++++++. .+.+.+++++|+++.. ++.+..+++.+++.+++++||+... .+.+.+ +++++|++++|++|+
T Consensus 141 -~~~~~~~~~l~--~~~l~~~~~v~~~~~~-~~~~~~~~~~a~~~g~~v~~Dp~~~--~~~~~~~ll~~~dil~~N~~Ea 214 (343)
T 2rbc_A 141 -HRLHEKKRACT--PEDIALFDAVLVDVRW-PELALDVLTVARALGKPAILDGDVA--PVETLEGLAPAATHIVFSEPAA 214 (343)
T ss_dssp -GGGGSSCCCCC--HHHHTTCSEEEECSSS-HHHHHHHHHHHHHTTCCEEEEECSC--CHHHHHHHGGGCSEEEEEHHHH
T ss_pred -CcccCChhHhc--HhhhCCCCEEEEcCCC-HHHHHHHHHHHHHCCCEEEEECCcc--ccccHHHHHhcCCEEEeCHHHH
Confidence 22334444442 1356889999999865 4678888999999999999999753 245666 899999999999999
Q ss_pred HHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCC-CEEEEEeCCCceEEEEec--cchhhhhcccCCCCCCC
Q 036840 161 VAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGI-RLVVLTLGSDGVLLCSKE--LLSSMRIGLRKTKPYGF 237 (327)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~~~ 237 (327)
..|++. . .++++++.|.+.|+ +.||||+|++|++++.++ +
T Consensus 215 ~~l~g~--------------~-------~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~---------------- 257 (343)
T 2rbc_A 215 TRLTGL--------------E-------TVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPT---------------- 257 (343)
T ss_dssp HHHHCC--------------S-------SHHHHHHHHHHHSTTSEEEEECGGGCEEEECTTCCC----------------
T ss_pred HHHcCC--------------C-------CHHHHHHHHHHhCCCceEEEEECCcceEEEeCCCce----------------
Confidence 998763 1 12556777888899 999999999999988654 2
Q ss_pred cccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHH
Q 036840 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAA 317 (327)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~ 317 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.+
T Consensus 258 ------------------------------~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v 307 (343)
T 2rbc_A 258 ------------------------------VHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKC 307 (343)
T ss_dssp ------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------eEEecCCCCccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 68899999999999999999999999999999999999999999999988
Q ss_pred HH
Q 036840 318 AN 319 (327)
Q Consensus 318 ~~ 319 (327)
+.
T Consensus 308 ~~ 309 (343)
T 2rbc_A 308 TV 309 (343)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 18
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-37 Score=295.88 Aligned_cols=253 Identities=21% Similarity=0.242 Sum_probs=205.7
Q ss_pred ceecCCchHHHHHHHHHc---CCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEe
Q 036840 2 NYVLGGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~L---G~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~ 78 (327)
+..+||++.|+|.++++| |.++.++|.+|+|.+|+.+++.|++.||+++++.. ++.+|++++++++ +++|++...
T Consensus 76 ~~~~GG~~~N~a~~~~~L~~lG~~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~ 153 (365)
T 3loo_A 76 EYIAGGSVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN 153 (365)
T ss_dssp EEEEECHHHHHHHHHHHHHTCTTSEEEEEEEESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE
T ss_pred EEecCCHHHHHHHHHHHhhcCCCcEEEEEEecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec
Confidence 468999999999999887 99999999999999999999999999999998876 6779999999998 677776543
Q ss_pred cchhhcccCCHHHHHH--HHhhhcCCcEEEEecC---CCHHHHHHHHHHHHhCCCCEEEecCchh----hhhhhhccccc
Q 036840 79 SVESIEKFLTPDWIRQ--FIHHISSASVLMVDAN---LSPPALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVKY 149 (327)
Q Consensus 79 ~~~~~~~~l~~~~i~~--~~~~l~~~~~v~~~g~---~~~~~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~~ 149 (327)
.++...+++++++. ..+.+.+++++|+++. .+++.+..+++.+++.++++++|++... ..+.+.+++++
T Consensus 154 --~ga~~~~~~~~~~~~~~~~~~~~~~~v~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~ 231 (365)
T 3loo_A 154 --LAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPY 231 (365)
T ss_dssp --CGGGGGCCGGGGGSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGG
T ss_pred --cchHhhCCHhHcCchhhHHHHhhCCEEEEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHh
Confidence 23445677776642 3456789999999974 3467788999999999999999997432 23567888999
Q ss_pred ceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc------CCCEEEEEeCCCceEEE--Eecc
Q 036840 150 ITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK------GIRLVVLTLGSDGVLLC--SKEL 221 (327)
Q Consensus 150 ~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~ 221 (327)
+|++++|++|++.+++..... .+ .++++++.|.+. +++.||||+|++|++++ ..++
T Consensus 232 ~dil~~N~~Ea~~l~g~~~~~------------~~----~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~ 295 (365)
T 3loo_A 232 VDVLFGNETEAIALAKEFNYG------------TE----DLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDN 295 (365)
T ss_dssp CSEEEEEHHHHHHHHHHTTCC------------CC----CHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSC
T ss_pred CCEEecCHHHHHHHhcccCCC------------CC----CHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCe
Confidence 999999999999999863211 01 235566777764 89999999999999998 4332
Q ss_pred chhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC---cccccCCCchhHHHHHHHHHHc
Q 036840 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASISS 298 (327)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vvdttGAGDaF~ag~l~~l~~ 298 (327)
.+++|++++ ++||||||||+|+|||+++|++
T Consensus 296 ----------------------------------------------~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~ 329 (365)
T 3loo_A 296 ----------------------------------------------VREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQ 329 (365)
T ss_dssp ----------------------------------------------CEEECCCCCC------CTTHHHHHHHHHHHHHHT
T ss_pred ----------------------------------------------EEEEeccccCCCCccCCCChHHHHHHHHHHHHHC
Confidence 678888887 8999999999999999999999
Q ss_pred CCCchhhcccchHHHHHHHHHH
Q 036840 299 GLDVMQSVAVDDAKTVYAAANV 320 (327)
Q Consensus 299 g~~~~~al~~a~aa~~~~~~~~ 320 (327)
|+++++|+++|++++++.++..
T Consensus 330 g~~l~~a~~~a~~~Aa~~v~~~ 351 (365)
T 3loo_A 330 SRTVDVCIKCGIWAAREIIQRS 351 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999998764
No 19
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=2.5e-37 Score=287.30 Aligned_cols=244 Identities=19% Similarity=0.160 Sum_probs=203.6
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++ +|+.+++.++++|++++.+....
T Consensus 29 ~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~ 107 (309)
T 1v1a_A 29 EVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKG 107 (309)
T ss_dssp EEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTT
T ss_pred eeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCC
Confidence 45789999999999999999999999999999999999999999999999988778 99999998888888887665434
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCC------HHHHHHHHHHHHhCCCCEEEecCch---h----hhhhhhcccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLS------PPALAASCKIAAECNIPVWFEPVSV---T----KSRRITSVVK 148 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~------~~~~~~l~~~a~~~~~~v~~d~~~~---~----~~~~~~~~l~ 148 (327)
.+...+++++++. +.+++++++|+++... .+.+..+++.+++.+++++||++.+ + ..+.+.++++
T Consensus 108 ~a~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~ 185 (309)
T 1v1a_A 108 SAGSALAPGAFDP--DYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALP 185 (309)
T ss_dssp CSGGGCCTTSSCG--GGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGG
T ss_pred ChhhhCCHhhCCh--hHhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHH
Confidence 4445576665543 4578899999987532 3567788889999999999999863 2 1245677899
Q ss_pred cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhc
Q 036840 149 YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIG 228 (327)
Q Consensus 149 ~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 228 (327)
++|++++|++|+..|++. + +++++ +.|++.||||+|++|+++ .++++
T Consensus 186 ~~dil~~N~~E~~~l~g~---------------~--------~~~~~---~~g~~~vvvt~G~~G~~~-~~~~~------ 232 (309)
T 1v1a_A 186 GVDLLFLSEEEAELLFGR---------------V--------EEALR---ALSAPEVVLKRGAKGAWA-FVDGR------ 232 (309)
T ss_dssp GCSEEEEEHHHHHHHHSS---------------H--------HHHHH---HTCCSEEEEECGGGCEEE-EETTE------
T ss_pred hCCEEECcHHHHHHHhCC---------------H--------HHHHH---hcCCCEEEEEecCCCeeE-ecCCc------
Confidence 999999999999988763 0 12222 679999999999999988 55231
Q ss_pred ccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhccc
Q 036840 229 LRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAV 308 (327)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~ 308 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++
T Consensus 233 ---------------------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 273 (309)
T 1v1a_A 233 ---------------------------------------RVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRL 273 (309)
T ss_dssp ---------------------------------------EEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred ---------------------------------------EEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCCHHHHHHH
Confidence 67889999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHH
Q 036840 309 DDAKTVYAAANV 320 (327)
Q Consensus 309 a~aa~~~~~~~~ 320 (327)
|++++++.++..
T Consensus 274 a~~~aa~~v~~~ 285 (309)
T 1v1a_A 274 ANLLGASVAASR 285 (309)
T ss_dssp HHHHHHHHHTSS
T ss_pred HHHHHHHHHcCC
Confidence 999999988753
No 20
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=1.2e-37 Score=289.96 Aligned_cols=245 Identities=17% Similarity=0.179 Sum_probs=202.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEE--ecCCCCEEEEEec
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNI--LDVNGELAAAVAS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~--~d~~g~~~~~~~~ 79 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++. ++++|++++.+..
T Consensus 29 ~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~ 108 (313)
T 2v78_A 29 EKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYR 108 (313)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEEC
T ss_pred EecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeC
Confidence 46789999999999999999999999999999999999999999999999988777799999998 8888988876654
Q ss_pred chhhcccCCHHHHHHHHhhhcCCcEEEEecCCC------HHHHHHHHHHHHhCCCCEEEecCch---hh-----hhhhhc
Q 036840 80 VESIEKFLTPDWIRQFIHHISSASVLMVDANLS------PPALAASCKIAAECNIPVWFEPVSV---TK-----SRRITS 145 (327)
Q Consensus 80 ~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~------~~~~~~l~~~a~~~~~~v~~d~~~~---~~-----~~~~~~ 145 (327)
...+...+++++++. +.+++++++|+++... .+.+..+++.+++. +||++.+ |. .+.+.+
T Consensus 109 ~~~a~~~l~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~ 182 (313)
T 2v78_A 109 KGSAGSRLSPEDINE--NYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILS 182 (313)
T ss_dssp TTCSGGGCCGGGCCH--HHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHH
T ss_pred CcChhHhCChhhCCH--HHhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHH
Confidence 444455677766643 4568899999986422 24555666666544 8999752 11 245667
Q ss_pred ccccce--EEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccch
Q 036840 146 VVKYIT--VVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLS 223 (327)
Q Consensus 146 ~l~~~d--vv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~ 223 (327)
+++++| ++++|++|++.+++. .+ ++++++.|.+.|++.||||+|++|++++.+++
T Consensus 183 ~l~~~d~~il~~N~~E~~~l~g~--------------~~-------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-- 239 (313)
T 2v78_A 183 ILKKYDIEVLITDPDDTKILLDV--------------TD-------PDEAYRKYKELGVKVLLYKLGSKGAIAYKDNV-- 239 (313)
T ss_dssp HHHHSCEEEEEECHHHHHHHHSC--------------CC-------HHHHHHHHHHTTEEEEEEECGGGCEEEEETTE--
T ss_pred HHHhcCeeEEECcHHHHHHHhCC--------------CC-------HHHHHHHHHhCCCCEEEEEECCCCcEEeeCCc--
Confidence 889999 999999999998763 11 24567778888999999999999999885433
Q ss_pred hhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCch
Q 036840 224 SMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVM 303 (327)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~ 303 (327)
.+++|+++++++|||||||+|+|||+++|++|++++
T Consensus 240 --------------------------------------------~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~ 275 (313)
T 2v78_A 240 --------------------------------------------KAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIE 275 (313)
T ss_dssp --------------------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred --------------------------------------------EEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCCHH
Confidence 688999999999999999999999999999999999
Q ss_pred hhcccchHHHHHHHHH
Q 036840 304 QSVAVDDAKTVYAAAN 319 (327)
Q Consensus 304 ~al~~a~aa~~~~~~~ 319 (327)
+|+++|++++++.++.
T Consensus 276 ~a~~~a~~~aa~~v~~ 291 (313)
T 2v78_A 276 YSLAHGIAASTLVITV 291 (313)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998865
No 21
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=2.6e-37 Score=289.83 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=207.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecC-CCCceEEEEEecCCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQK-DIDTAVVSNILDVNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~-~~~t~~~~~~~d~~g~~~~~~~~~ 80 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.+ ..+|+.+++.++.+|++++.+...
T Consensus 40 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~ 119 (332)
T 2qcv_A 40 SKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQ 119 (332)
T ss_dssp EEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECT
T ss_pred EecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECC
Confidence 4678999999999999999999999999999999999999999999999987765 357998888777677777666544
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCC-----CHHHHHHHHHHHHhCCCCEEEecCch---hh-----hhhhhccc
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANL-----SPPALAASCKIAAECNIPVWFEPVSV---TK-----SRRITSVV 147 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~-----~~~~~~~l~~~a~~~~~~v~~d~~~~---~~-----~~~~~~~l 147 (327)
..++..+++++++. ..+++++++|+++.. +.+.+..+++.+++.++++++|++.+ |. .+.+.+++
T Consensus 120 ~~a~~~l~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll 197 (332)
T 2qcv_A 120 DVADLYLSPEEVNE--AYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVA 197 (332)
T ss_dssp TCGGGGCCGGGCCH--HHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHH
T ss_pred cchhhhCCHhHCCH--HHHccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHH
Confidence 44455677766643 356889999998742 33677888999999999999999752 11 13456688
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhh
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 227 (327)
+++|++++|++|+..|++... ..+ ..++++.|++.|++.||||+|++|++++.+++.
T Consensus 198 ~~~dil~~N~~E~~~l~g~~~-----------~~~-------~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~----- 254 (332)
T 2qcv_A 198 EQSDIVIGTREEFDVLENRTE-----------KGD-------NDETIRYLFKHSPELIVIKHGVEGSFAYTKAGE----- 254 (332)
T ss_dssp HHCSEEEEEHHHHHHHTTCSS-----------CCC-------HHHHHHHHTTSSCSEEEEECGGGCEEEEETTSC-----
T ss_pred HhCCEEEccHHHHHHHhCCCc-----------CCC-------HHHHHHHHHHcCCCEEEEEECCcceEEEecCCc-----
Confidence 999999999999998876411 001 145567788889999999999999998876321
Q ss_pred cccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcc
Q 036840 228 GLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVA 307 (327)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~ 307 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|++
T Consensus 255 ----------------------------------------~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~ 294 (332)
T 2qcv_A 255 ----------------------------------------AYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALK 294 (332)
T ss_dssp ----------------------------------------EEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ----------------------------------------eEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 6788999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHH
Q 036840 308 VDDAKTVYAAANV 320 (327)
Q Consensus 308 ~a~aa~~~~~~~~ 320 (327)
+|++++++.++..
T Consensus 295 ~A~~~aa~~v~~~ 307 (332)
T 2qcv_A 295 YGSASASIVVSKH 307 (332)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHccC
Confidence 9999999988753
No 22
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-37 Score=293.06 Aligned_cols=258 Identities=12% Similarity=0.100 Sum_probs=207.3
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEE-E-ec
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAA-V-AS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~-~-~~ 79 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++... +.+|+.+++..+.++++++. + ..
T Consensus 30 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~ 108 (346)
T 3ktn_A 30 RMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNR 108 (346)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCC
T ss_pred EEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCC
Confidence 468999999999999999999999999999999999999999999999998775 56899998887765554443 3 23
Q ss_pred chhhcccCCHHHHHHHHhhhcCCcEEEEecCC---CH---HHHHHHHHHHHhCCCCEEEecCch---hh-------hhhh
Q 036840 80 VESIEKFLTPDWIRQFIHHISSASVLMVDANL---SP---PALAASCKIAAECNIPVWFEPVSV---TK-------SRRI 143 (327)
Q Consensus 80 ~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~---~~---~~~~~l~~~a~~~~~~v~~d~~~~---~~-------~~~~ 143 (327)
...+...+++++++ +.+.+++++++|+++.. ++ +.+..+++.+++.+++++||++.+ |. .+.+
T Consensus 109 ~~~a~~~l~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~ 187 (346)
T 3ktn_A 109 HQSAFGISEAKDYD-FEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQY 187 (346)
T ss_dssp TTSTTTTCCGGGSC-HHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHH
T ss_pred CCChhhhCChhhcC-hHHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHH
Confidence 33444567777665 33578899999998743 22 567888999999999999999732 21 2557
Q ss_pred hcccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc-CCCEEEEEeCCCc-------eE
Q 036840 144 TSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDG-------VL 215 (327)
Q Consensus 144 ~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G-------~~ 215 (327)
.++++++|++++|++|+..|++.... .+..+.++ ++++++.|.+. |++.||||+|++| ++
T Consensus 188 ~~ll~~~dil~~N~~E~~~l~g~~~~--------~~~~~~~~----~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~ 255 (346)
T 3ktn_A 188 ERILPYCDIVFGSRRDLVELLGFIPR--------EDLEGEAQ----ETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGY 255 (346)
T ss_dssp HHHGGGCSEEECCHHHHHHTSCCCCC--------TTSCHHHH----HHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEE
T ss_pred HHHHHhCCEEEccHHHHHHHhCCCCC--------ccccchHH----HHHHHHHHHHhcCCCEEEEecCccccccCcceEE
Confidence 78899999999999999987664100 00112222 35667778774 9999999999998 88
Q ss_pred EEEeccchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHH
Q 036840 216 LCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLAS 295 (327)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~ 295 (327)
++.++. .+++|+++++++|||||||+|+|||+++
T Consensus 256 ~~~~~~----------------------------------------------~~~~~~~~v~vvdttGAGDaF~ag~~~~ 289 (346)
T 3ktn_A 256 LYTQNE----------------------------------------------YQQSEKRPLLNLDRIGAGDAYAAGILYG 289 (346)
T ss_dssp EECSSC----------------------------------------------EEECCCEECCCSCCTTHHHHHHHHHHHH
T ss_pred EEECCc----------------------------------------------eEEeCCCccccCCCCchhHHHHHHHHHH
Confidence 776543 7889999999999999999999999999
Q ss_pred HHcCCCchhhcccchHHHHHHHHH
Q 036840 296 ISSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 296 l~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
|++|+++++|+++|+++++++++.
T Consensus 290 l~~g~~l~~a~~~A~a~aa~~v~~ 313 (346)
T 3ktn_A 290 YSQNWSLEKAVTFATVNGVLAHTI 313 (346)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred HHcCCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998864
No 23
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=1e-36 Score=290.87 Aligned_cols=257 Identities=17% Similarity=0.224 Sum_probs=206.3
Q ss_pred ceecCCchHHHHHHHHHcCCC---ceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEe
Q 036840 2 NYVLGGVARNVAECMSKLGSK---PYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~---v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~ 78 (327)
++.+||++.|+|+++++||.+ +.|+|++|+|.+|+.+++.|++.||+++++...++.+|+.++++++ +++|++..+
T Consensus 79 ~~~~GGsa~N~a~~la~LG~~~~~~~fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~ 157 (372)
T 3uq6_A 79 NYIAGGATLNTVKMIQWIIQKPFVCSYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY 157 (372)
T ss_dssp EEEECCHHHHHHHHHHHHHCSTTSEEEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE
T ss_pred EEeCCcHHHHHHHHHHHcCCCCCcEEEEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe
Confidence 467999999999999999865 8999999999999999999999999999988888788888888775 788887654
Q ss_pred cchhhcccCCHHHHHH--HHhhhcCCcEEEEecCC---CHHHHHHHHHHHHhCCCCEEEecCchh----hhhhhhccccc
Q 036840 79 SVESIEKFLTPDWIRQ--FIHHISSASVLMVDANL---SPPALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVKY 149 (327)
Q Consensus 79 ~~~~~~~~l~~~~i~~--~~~~l~~~~~v~~~g~~---~~~~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~~ 149 (327)
. ++...+++++++. ..+.+.+++++|+++.. +.+.+..+++.+++.++++++|++..+ .++.+.+++++
T Consensus 158 ~--ga~~~l~~~~i~~~~~~~~i~~a~~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~ 235 (372)
T 3uq6_A 158 L--GAACDLSLAHIEQPHVWSLVEKAQVYYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISY 235 (372)
T ss_dssp E--EGGGGCCHHHHTSHHHHHHHHHCSEEEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTT
T ss_pred c--cchhhcchhhhhhhhHHHHhhcccEEEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhc
Confidence 3 3345688888753 34678899999999853 346778889999999999999998643 24567788999
Q ss_pred ceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHH-------cCCCEEEEEeCCCceEEEEeccc
Q 036840 150 ITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLE-------KGIRLVVLTLGSDGVLLCSKELL 222 (327)
Q Consensus 150 ~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~g~~~vvvt~G~~G~~~~~~~~~ 222 (327)
+|++++|++|+..|++...... ++ ++++++.+.+ .+.+.||||+|++|++++..+..
T Consensus 236 ~Dil~~Ne~Ea~~l~~~~~~~~------------~~----~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~ 299 (372)
T 3uq6_A 236 SNIVFGNESEAEAYGEVHGLLE------------DT----VHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDS 299 (372)
T ss_dssp CSEEEEEHHHHHHHHHHTTCCS------------SH----HHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCS
T ss_pred CCcccCCHHHHHHHhCCCCCch------------hH----HHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCc
Confidence 9999999999999998743211 11 2344455443 36789999999999998876531
Q ss_pred hhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC-cccccCCCchhHHHHHHHHHHcCCC
Q 036840 223 SSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSGLD 301 (327)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvdttGAGDaF~ag~l~~l~~g~~ 301 (327)
....+.+|+.+. ++||||||||+|+|||+++|++|++
T Consensus 300 ------------------------------------------~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~ 337 (372)
T 3uq6_A 300 ------------------------------------------EIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKP 337 (372)
T ss_dssp ------------------------------------------SCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC
T ss_pred ------------------------------------------eeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCC
Confidence 011344555543 7999999999999999999999999
Q ss_pred chhhcccchHHHHHHHHH
Q 036840 302 VMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 302 ~~~al~~a~aa~~~~~~~ 319 (327)
+++|+++|+++|++.+++
T Consensus 338 l~~a~~~a~~aAa~vv~~ 355 (372)
T 3uq6_A 338 MITSLHAAVKAAAYIICR 355 (372)
T ss_dssp HHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 999999999999988764
No 24
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=8.9e-37 Score=284.35 Aligned_cols=244 Identities=24% Similarity=0.371 Sum_probs=204.0
Q ss_pred ceecCCchHHHHHHHHHcCCC-ceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSK-PYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~-v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~ 80 (327)
+..+||++.|+|.+|++||.+ +.++|.+|+|.+|+.+++.|++.|| ++.+.++.+|+.++++++++|++++.+.+
T Consensus 47 ~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~- 122 (311)
T 1vm7_A 47 NVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP- 122 (311)
T ss_dssp EEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEEC-
T ss_pred eecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEec-
Confidence 457899999999999999999 9999999999999999999999999 56666777999999999988999877654
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHH
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~ 160 (327)
+++..+++++++ .+.+++++++++++..+.+.+..+ +++.++++++|++.. .....++++++|++++|++|+
T Consensus 123 -ga~~~l~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~---a~~~~~~v~~Dp~~~--~~~~~~ll~~~dil~~N~~E~ 194 (311)
T 1vm7_A 123 -GANAELKKELID--WNTLSESDILLLQNEIPFETTLEC---AKRFNGIVIFDPAPA--QGINEEIFQYLDYLTPNEKEI 194 (311)
T ss_dssp -GGGGGCCGGGCC--HHHHTTCSEEEECSSSCHHHHHHH---HHHCCSEEEECCCSC--TTCCGGGGGGCSEECCBHHHH
T ss_pred -CccccCCHHHhC--hhhcccCCEEEEeCCCCHHHHHHH---HHHcCCEEEEeCcch--hhhhHHHHhhCCEEeCCHHHH
Confidence 334557777654 245788999999988776555443 778899999999863 234567889999999999999
Q ss_pred HHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCccc
Q 036840 161 VAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240 (327)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
..|++....+ . +.++++++.|.+.|++.||+|+|++|++++.+++
T Consensus 195 ~~l~g~~~~~------------~----~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~------------------- 239 (311)
T 1vm7_A 195 EALSKDFFGE------------F----LTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNE------------------- 239 (311)
T ss_dssp HHHHHHHHSC------------C----CCHHHHHHHHHHTTCSEEEEECGGGCEEEEETTE-------------------
T ss_pred HHHhCCCCCC------------h----hHHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCc-------------------
Confidence 9998753210 0 1235667788888999999999999999886543
Q ss_pred ccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHH
Q 036840 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++.
T Consensus 240 ---------------------------~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 291 (311)
T 1vm7_A 240 ---------------------------KKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTR 291 (311)
T ss_dssp ---------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred ---------------------------eEEecCCCcccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCc
Confidence 6788999889999999999999999999999999999999999999998764
No 25
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=1.9e-38 Score=297.47 Aligned_cols=247 Identities=25% Similarity=0.353 Sum_probs=196.0
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+.++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++..+ +|++++.+..
T Consensus 50 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~-- 126 (327)
T 3hj6_A 50 TRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYR-- 126 (327)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEEC--
T ss_pred eeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEec--
Confidence 4679999999999999999999999999999999999999999999999998888888988877665 5777765543
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCchhh--------hhhhhcccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSVTK--------SRRITSVVK 148 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~~~--------~~~~~~~l~ 148 (327)
.++..++++++.. +.+++++++|+++. .+.+.+..+++.+++.+++++||++.+.. .+.+.++++
T Consensus 127 ~a~~~~~~~~~~~--~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~ 204 (327)
T 3hj6_A 127 EADMYLQEDDIIF--ELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIIS 204 (327)
T ss_dssp SGGGGCCSCCCHH--HHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHT
T ss_pred ChhhhCChhhcCH--hHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHh
Confidence 2344565554432 46789999999872 24467788999999999999999986321 345677899
Q ss_pred cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhc
Q 036840 149 YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIG 228 (327)
Q Consensus 149 ~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 228 (327)
++|++++|++|+..+++.. +. +++++.|.+.|++.||||+|++|++++++++
T Consensus 205 ~~dil~~N~~E~~~l~g~~--------------~~-------~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~------- 256 (327)
T 3hj6_A 205 RADFVKPSLDDARHLFGPD--------------SP-------ENYVKRYLELGVKAVILTLGEEGVIASDGEE------- 256 (327)
T ss_dssp TCSEECCBHHHHHHHHTTS--------------CS-------SGGGGGGTTTTCSEEEEECSTTCEEEECSSC-------
T ss_pred hCCEEecCHHHHHHHhCCC--------------CH-------HHHHHHHHhCCCCEEEEEECCCceEEEeCCe-------
Confidence 9999999999999988741 11 2234556678999999999999999987654
Q ss_pred ccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhccc
Q 036840 229 LRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAV 308 (327)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~ 308 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++
T Consensus 257 ---------------------------------------~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~ 297 (327)
T 3hj6_A 257 ---------------------------------------IIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKL 297 (327)
T ss_dssp ---------------------------------------EEESCSSTTC-----CCHHHHHHHHHHTTSSCSTTHHHHHH
T ss_pred ---------------------------------------eEEcCCcccccCCCcChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 78999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHH
Q 036840 309 DDAKTVYAAANV 320 (327)
Q Consensus 309 a~aa~~~~~~~~ 320 (327)
|+++++++++..
T Consensus 298 A~a~aa~~v~~~ 309 (327)
T 3hj6_A 298 GNGVAAFKIRGV 309 (327)
T ss_dssp HHCCCSSCC---
T ss_pred HHHHHHHHhcCC
Confidence 999988876653
No 26
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=2.5e-37 Score=287.48 Aligned_cols=244 Identities=16% Similarity=0.175 Sum_probs=201.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCC--EEEEEec
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGE--LAAAVAS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~--~~~~~~~ 79 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|+ +++.+..
T Consensus 29 ~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~ 108 (311)
T 2dcn_A 29 EKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYR 108 (311)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEEC
T ss_pred eecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEec
Confidence 35789999999999999999999999999999999999999999999999988777899999999888888 8776654
Q ss_pred chhhcccCCHHHHHHHHhhhcCCcEEEEecCC------CHHHHHHHHHHHHhCCCCEEEecCch---hh----hhhhhcc
Q 036840 80 VESIEKFLTPDWIRQFIHHISSASVLMVDANL------SPPALAASCKIAAECNIPVWFEPVSV---TK----SRRITSV 146 (327)
Q Consensus 80 ~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~------~~~~~~~l~~~a~~~~~~v~~d~~~~---~~----~~~~~~~ 146 (327)
...+...+++++++. +.+++++++|+++.. +.+.+..+++.+++. +||++.+ |. .+.+.++
T Consensus 109 ~~~a~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~ 182 (311)
T 2dcn_A 109 KGSAGSKLSPEDVDE--EYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKL 182 (311)
T ss_dssp TTCTGGGCCGGGCCH--HHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHH
T ss_pred CcChhhhCChhhcCh--HHHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHH
Confidence 444455677776643 457899999998642 235556666666544 8999752 21 2356778
Q ss_pred cc--cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchh
Q 036840 147 VK--YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSS 224 (327)
Q Consensus 147 l~--~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~ 224 (327)
++ ++|++++|++|+..+++. .+ ++++++.|++. ++.||||+|++|++++.+++
T Consensus 183 l~~~~~dil~~N~~E~~~l~g~--------------~~-------~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~--- 237 (311)
T 2dcn_A 183 LSKFHLKFLITDTDDSKIILGE--------------SD-------PDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGK--- 237 (311)
T ss_dssp HHHCCEEEEEEEHHHHHHHHSC--------------CC-------HHHHHHHHTTT-EEEEEEEEETTEEEEEETTE---
T ss_pred HhhcCCcEEECCHHHHHHHhCC--------------CC-------HHHHHHHHHHh-CCEEEEEECCCCcEEEeCCc---
Confidence 99 999999999999998763 11 24566777777 88999999999999886543
Q ss_pred hhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchh
Q 036840 225 MRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQ 304 (327)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~ 304 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++
T Consensus 238 -------------------------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~ 274 (311)
T 2dcn_A 238 -------------------------------------------KYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEK 274 (311)
T ss_dssp -------------------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCCHHH
T ss_pred -------------------------------------------EEEeCCccccccCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 6788999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHHH
Q 036840 305 SVAVDDAKTVYAAAN 319 (327)
Q Consensus 305 al~~a~aa~~~~~~~ 319 (327)
|+++|++++++.++.
T Consensus 275 a~~~a~~~aa~~v~~ 289 (311)
T 2dcn_A 275 ALDYAIVASTLNVMI 289 (311)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998764
No 27
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=7.6e-37 Score=289.78 Aligned_cols=247 Identities=19% Similarity=0.276 Sum_probs=199.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
...+||+ +|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||++. +...++.+|+.+++++++++++...... .
T Consensus 90 ~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~~-~ 166 (352)
T 4e84_A 90 EERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELLGSSGVTPH-LERDPALPTTIKLRVLARQQQLLRVDFE-A 166 (352)
T ss_dssp EEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHTTTSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEEC-C
T ss_pred EEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHHHHcCCcee-eEECCCCCCceEEEEEcCCceEEEEEcC-C
Confidence 4678996 89999999999999999999999999999999999999994 5566777999999998876554332211 1
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEec--CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDA--NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDE 159 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g--~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E 159 (327)
..+..+.++.++.+.+.+++++++++++ +.+.+.+..+++.+++.++++++|++.. ..++++++|++++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~-----~~~~l~~~dil~pN~~E 241 (352)
T 4e84_A 167 MPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGGLTHVTTMIEKARAAGKAVLVDPKGD-----DWARYRGASLITPNRAE 241 (352)
T ss_dssp CCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSSCSSHHHHHHHHHHTTCEEEEECCSS-----CCSTTTTCSEECCBHHH
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCEEEEECCCc-----chhhccCCcEEcCCHHH
Confidence 1122233344455556789999999994 2233447888999999999999999762 34578899999999999
Q ss_pred HHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHH-cCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCc
Q 036840 160 LVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLE-KGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238 (327)
Q Consensus 160 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
++.+++. . .+.++ ++++++.|++ .|++.||||+|++|++++++++
T Consensus 242 a~~l~g~-~------------~~~~~----~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~----------------- 287 (352)
T 4e84_A 242 LREVVGQ-W------------KSEDD----LRARVANLRAELDIDALLLTRSEEGMTLFSAGG----------------- 287 (352)
T ss_dssp HHHHHCC-C------------SSHHH----HHHHHHHHHHHHTCSEEEEECGGGCEEEEETTE-----------------
T ss_pred HHHHhCC-C------------CCHHH----HHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCc-----------------
Confidence 9998872 1 11223 3556677775 6999999999999999987654
Q ss_pred ccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHH
Q 036840 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAA 318 (327)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~ 318 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++++.++
T Consensus 288 -----------------------------~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 288 -----------------------------ELHAPALAREVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVG 338 (352)
T ss_dssp -----------------------------EEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------eEEecCCCcCccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999999999999999999986
Q ss_pred H
Q 036840 319 N 319 (327)
Q Consensus 319 ~ 319 (327)
.
T Consensus 339 ~ 339 (352)
T 4e84_A 339 K 339 (352)
T ss_dssp S
T ss_pred C
Confidence 5
No 28
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=5.1e-38 Score=296.18 Aligned_cols=247 Identities=24% Similarity=0.330 Sum_probs=198.8
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++.++++|+|++.++...
T Consensus 46 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~ 125 (339)
T 1tyy_A 46 LKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHP 125 (339)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSS
T ss_pred EEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCC
Confidence 45789999999999999999999999999999999999999999999999988778899999988888888877665433
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCchh--------hhhhhhcccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSVT--------KSRRITSVVK 148 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~~--------~~~~~~~~l~ 148 (327)
+++..++++ ..+.+++++++++++. .+.+.+..+++.+++.+++++||++.+. ..+.+.++++
T Consensus 126 ~a~~~l~~~----~~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~ 201 (339)
T 1tyy_A 126 GADTYVSPQ----DLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAA 201 (339)
T ss_dssp CGGGGCCGG----GCCCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHH
T ss_pred ChhhhCCcc----hhhHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHh
Confidence 445556554 1246788999999752 2335677888999999999999997531 1234567889
Q ss_pred cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhc
Q 036840 149 YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIG 228 (327)
Q Consensus 149 ~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~ 228 (327)
++|++++|++|+..|++.. ++ +++++.|.+.|++.||||+|++|++++.+++
T Consensus 202 ~~dil~~N~~Ea~~l~g~~--------------~~-------~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~------- 253 (339)
T 1tyy_A 202 LASICKVSADELCQLSGAS--------------HW-------QDARYYLRDLGCDTTIISLGADGALLITAEG------- 253 (339)
T ss_dssp HCSEEEEEHHHHHHHHCCS--------------SG-------GGGSSTTGGGTCSCEEEECGGGCEEEESSSC-------
T ss_pred hCCEEecCHHHHHHHhCCC--------------CH-------HHHHHHHHHcCCCEEEEEECCCceEEEeCCc-------
Confidence 9999999999999987641 11 2234556677999999999999999886543
Q ss_pred ccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcC-----CCch
Q 036840 229 LRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSG-----LDVM 303 (327)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g-----~~~~ 303 (327)
.+++|+++++++|||||||+|+|||+++|++| ++++
T Consensus 254 ---------------------------------------~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~ 294 (339)
T 1tyy_A 254 ---------------------------------------EFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLA 294 (339)
T ss_dssp ---------------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHH
T ss_pred ---------------------------------------eEEcCCCCCCcCCCCCchHHHHHHHHHHHHhccccccccHH
Confidence 68899999999999999999999999999997 8999
Q ss_pred hhcccchHHHHHHHHH
Q 036840 304 QSVAVDDAKTVYAAAN 319 (327)
Q Consensus 304 ~al~~a~aa~~~~~~~ 319 (327)
+|+++|++++++.++.
T Consensus 295 ~a~~~A~a~aa~~v~~ 310 (339)
T 1tyy_A 295 EAISNANACGAMAVTA 310 (339)
T ss_dssp HHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999998865
No 29
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=3e-37 Score=286.02 Aligned_cols=239 Identities=19% Similarity=0.228 Sum_probs=200.9
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.++++++++|++++.+.. +
T Consensus 38 ~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~-~ 116 (302)
T 2c4e_A 38 RKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLW-G 116 (302)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEEC-G
T ss_pred eecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeC-C
Confidence 357899999999999999999999999999999999999999999999988877777899999999888998875543 2
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh---hhhhhhcccccceEEeCCHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT---KSRRITSVVKYITVVSPNED 158 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~dvv~~n~~ 158 (327)
++..+++++++. .+++++|+++..+ +.+..+++.+++.+ +++||++... ..+.+.++++++|++++|++
T Consensus 117 -~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~~~~~a~~~g-~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~ 188 (302)
T 2c4e_A 117 -AAKHYKELNPPN-----FNTEIVHIATGDP-EFNLKCAKKAYGNN-LVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKH 188 (302)
T ss_dssp -GGGGGGGCCCCC-----CCEEEEEECSSCH-HHHHHHHHHHBTTB-EEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHH
T ss_pred -hhhhCCHhhcCc-----ccCCEEEEeCCCc-HHHHHHHHHHHhcC-CEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHH
Confidence 333455544321 6799999998654 78889999999999 9999998532 13456778999999999999
Q ss_pred HHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCc
Q 036840 159 ELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238 (327)
Q Consensus 159 E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
|+..|++.... + . ..|++. ++.||||+|++|++++.+++
T Consensus 189 E~~~l~g~~~~--------------~------~---~~l~~~-~~~vvvt~G~~G~~~~~~~~----------------- 227 (302)
T 2c4e_A 189 EFERASNLLNF--------------E------I---DDYLER-VDALIVTKGSKGSVIYTKDK----------------- 227 (302)
T ss_dssp HHHHHHHHHTC--------------C------H---HHHHTT-CSEEEEECGGGCEEEECSSC-----------------
T ss_pred HHHHHhCCCCc--------------c------H---HHHHhc-CCEEEEEECCCceEEEeCCc-----------------
Confidence 99999875211 0 1 156666 89999999999999886543
Q ss_pred ccccccccccccCCCccCCCCCCCCCcceeEeecCCCCc-ccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHH
Q 036840 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAA 317 (327)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~ 317 (327)
.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|++++++.+
T Consensus 228 -----------------------------~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~ 278 (302)
T 2c4e_A 228 -----------------------------KIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVV 278 (302)
T ss_dssp -----------------------------EEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred -----------------------------EEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 6789999998 9999999999999999999999999999999999999988
Q ss_pred HH
Q 036840 318 AN 319 (327)
Q Consensus 318 ~~ 319 (327)
+.
T Consensus 279 ~~ 280 (302)
T 2c4e_A 279 EA 280 (302)
T ss_dssp TS
T ss_pred cc
Confidence 65
No 30
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=1.7e-36 Score=285.88 Aligned_cols=252 Identities=17% Similarity=0.246 Sum_probs=206.6
Q ss_pred ceecCCchHHHHHHHHHcC----CCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEE
Q 036840 2 NYVLGGVARNVAECMSKLG----SKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAV 77 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG----~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~ 77 (327)
+..+||++.|+|.+|++|| .++.|+|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++..
T Consensus 59 ~~~~GG~~~NvA~~la~lgg~~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~ 136 (345)
T 1bx4_A 59 EYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIA 136 (345)
T ss_dssp EEEEECHHHHHHHHHHHHHCSSTTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEE
T ss_pred eecCCcHHHHHHHHHHHhcCCCCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeee-cCCCCCceEEEEEc-CCceEeee
Confidence 4678999999999999996 999999999999999999999999999999876 45678999999887 67776543
Q ss_pred ecchhhcccCCHH-HHH--HHHhhhcCCcEEEEec---CCCHHHHHHHHHHHHhCCCCEEEecCchhh----hhhhhccc
Q 036840 78 ASVESIEKFLTPD-WIR--QFIHHISSASVLMVDA---NLSPPALAASCKIAAECNIPVWFEPVSVTK----SRRITSVV 147 (327)
Q Consensus 78 ~~~~~~~~~l~~~-~i~--~~~~~l~~~~~v~~~g---~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~----~~~~~~~l 147 (327)
. .+++..++++ +++ .+.+.+.+++++|+++ .++.+.+..+++.+++.++++++|+..... .+.+.+++
T Consensus 137 ~--~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l 214 (345)
T 1bx4_A 137 N--LAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVM 214 (345)
T ss_dssp E--CGGGGGCCGGGTTTSHHHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHG
T ss_pred c--cchHhhcCcccccCcHHHHHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHh
Confidence 2 2334456666 554 2345678899999986 356788899999999999999999975432 24466789
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHH------cCCCEEEEEeCCCceEEEEecc
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLE------KGIRLVVLTLGSDGVLLCSKEL 221 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~ 221 (327)
+++|++++|++|+..+++....+ .+ .++++++.|.+ .|++.||||+|++|++++.+++
T Consensus 215 ~~~dil~~N~~E~~~l~g~~~~~------------~~----~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~ 278 (345)
T 1bx4_A 215 PYVDILFGNETEAATFAREQGFE------------TK----DIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESE 278 (345)
T ss_dssp GGCSEEEEEHHHHHHHHHHTTCC------------CC----CHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSC
T ss_pred ccCCEEeCCHHHHHHHhcccCCC------------CC----CHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCe
Confidence 99999999999999998863211 01 13566777877 5999999999999999886543
Q ss_pred chhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC---cccccCCCchhHHHHHHHHHHc
Q 036840 222 LSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASISS 298 (327)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vvdttGAGDaF~ag~l~~l~~ 298 (327)
.+++|++++ +++|||||||+|+|||+++|++
T Consensus 279 ----------------------------------------------~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~ 312 (345)
T 1bx4_A 279 ----------------------------------------------VTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVS 312 (345)
T ss_dssp ----------------------------------------------EEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTT
T ss_pred ----------------------------------------------EEEEeccccCcCccccCCCcchHHHHHHHHHHHc
Confidence 678888776 8999999999999999999999
Q ss_pred CCCchhhcccchHHHHHHHHH
Q 036840 299 GLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 299 g~~~~~al~~a~aa~~~~~~~ 319 (327)
|+++++|+++|++++++.++.
T Consensus 313 g~~~~~a~~~A~~~aa~~v~~ 333 (345)
T 1bx4_A 313 DKPLTECIRAGHYAASIIIRR 333 (345)
T ss_dssp TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 31
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=8.1e-36 Score=277.01 Aligned_cols=245 Identities=22% Similarity=0.289 Sum_probs=202.1
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEec-CCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD-VNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d-~~g~~~~~~~~~ 80 (327)
+.++||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++++.... +|+.++.+++ ++|++++....
T Consensus 34 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~--~t~~~~~~~~~~~g~~~~~~~~- 109 (309)
T 3umo_A 34 VFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD--WTRQNLHVHVEASGEQYRFVMP- 109 (309)
T ss_dssp EEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS--CCCCCEEEEETTTCCEEEEECC-
T ss_pred eecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecC--CCeeEEEEEECCCCcEEEEEcC-
Confidence 5789999999999999999999999999999 99999999999999999887653 4666665554 47888765533
Q ss_pred hhhcccCCHHHHHHHHhh---hcCCcEEEEecCC----CHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccccc--ce
Q 036840 81 ESIEKFLTPDWIRQFIHH---ISSASVLMVDANL----SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--IT 151 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~---l~~~~~v~~~g~~----~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~--~d 151 (327)
+ . .+++++++.+.+. +..++++++++.+ +.+.+..+++.+++.++++++|++. +.+.+++++ +|
T Consensus 110 g-~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~----~~l~~~l~~~~~d 182 (309)
T 3umo_A 110 G-A--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG----EALSAALAIGNIE 182 (309)
T ss_dssp C-C--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH----HHHHHHTSSCCBS
T ss_pred C-C--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc----HHHHHHhccCCCe
Confidence 2 1 3778877655433 3578899999854 4578889999999999999999974 345667777 59
Q ss_pred EEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCC-CEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 152 VVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGI-RLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 152 vv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
++++|++|++.+++.... +.++ ++++++.|.+.+. +.||||+|++|++++++++
T Consensus 183 il~~N~~E~~~l~g~~~~------------~~~~----~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~--------- 237 (309)
T 3umo_A 183 LVKPNQKELSALVNRELT------------QPDD----VRKAAQEIVNSGKAKRVVVSLGPQGALGVDSEN--------- 237 (309)
T ss_dssp EECCBHHHHHHHHTSCCC------------STTH----HHHHHHHHHHTTSBSCEEEECGGGCEEEECSSC---------
T ss_pred EEEeCHHHHHHHhCCCCC------------CHHH----HHHHHHHHHHcCCCcEEEEEcCcccEEEEECCc---------
Confidence 999999999999875211 1122 3566788888887 8999999999999987654
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 238 -------------------------------------~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~ 280 (309)
T 3umo_A 238 -------------------------------------CIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGV 280 (309)
T ss_dssp -------------------------------------EEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -------------------------------------EEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 036840 311 AKTVYAAAN 319 (327)
Q Consensus 311 aa~~~~~~~ 319 (327)
+++++.++.
T Consensus 281 ~~aa~~v~~ 289 (309)
T 3umo_A 281 AAGSAATLN 289 (309)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHhcC
Confidence 999998865
No 32
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=6.5e-36 Score=280.74 Aligned_cols=245 Identities=19% Similarity=0.237 Sum_probs=199.8
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||+++|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++++.+.+ .|++++.+++++ +++ .+...+
T Consensus 52 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~--~t~~~~~~v~~~-~~~-~~~~~g 126 (330)
T 2jg1_A 52 SKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADIKHAFYNIKG--ETRNCIAILHEG-QQT-EILEQG 126 (330)
T ss_dssp EEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS--CCEEEEEEEETT-EEE-EEEECC
T ss_pred EEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCCceeEEEccC--CCeeEEEEEeCC-CcE-EEECCC
Confidence 467899999999999999999999999996 699999999999999999887654 478888888765 444 343332
Q ss_pred hhcccCCHHHHHHHH----hhhcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc---cc
Q 036840 82 SIEKFLTPDWIRQFI----HHISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK---YI 150 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~----~~l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~---~~ 150 (327)
..+++++++.+. +.+++++++|+++.++ .+.+..+++.+++.+++++||++.. .+.++++ ++
T Consensus 127 ---~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~----~l~~~l~~~~~~ 199 (330)
T 2jg1_A 127 ---PEIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGA----TLQTVLENPYKP 199 (330)
T ss_dssp ---CBCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHH----HHHHHHTSSSCC
T ss_pred ---CCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH----HHHHHHhccCCc
Confidence 247777766533 3468999999988654 3678889999999999999999753 3455555 89
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
|++++|++|+..+++.... .+.++ ++++++.|++.|++.||||+|++|++++.+++
T Consensus 200 dil~~N~~E~~~l~g~~~~-----------~~~~~----~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~--------- 255 (330)
T 2jg1_A 200 TVIKPNISELYQLLNQPLD-----------ESLES----LKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHT--------- 255 (330)
T ss_dssp SEECCBHHHHHHHTTSCCC-----------CCHHH----HHHHHHSGGGTTCSEEEEECGGGCEEEEETTE---------
T ss_pred eEEEeCHHHHHHHhCCCCC-----------CCHHH----HHHHHHHHHHcCCCEEEEeecCCceEEEeCCC---------
Confidence 9999999999988763110 01222 25566777778999999999999999887653
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 256 -------------------------------------~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~ 298 (330)
T 2jg1_A 256 -------------------------------------FYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKAN 298 (330)
T ss_dssp -------------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -------------------------------------EEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 036840 311 AKTVYAAAN 319 (327)
Q Consensus 311 aa~~~~~~~ 319 (327)
+++++.++.
T Consensus 299 a~aa~~v~~ 307 (330)
T 2jg1_A 299 TLGMLNAQE 307 (330)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHhcC
Confidence 999999875
No 33
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1e-35 Score=276.09 Aligned_cols=244 Identities=20% Similarity=0.300 Sum_probs=201.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+ ++|+++. +...+
T Consensus 32 ~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~-~~~~g 105 (306)
T 2abq_A 32 RKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSFIEVEG--DTRINVKI--KGKQETE-LNGTA 105 (306)
T ss_dssp EEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECCEEESS--CCEEEEEE--ESSSCEE-EBCCC
T ss_pred EecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEEEEcCC--CCceEEEE--eCCceEE-EECCC
Confidence 457899999999999999999999999998 799999999999999999987654 47777665 4677754 33322
Q ss_pred hhcccCCHHHHHHHHhh---hcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc-cceEE
Q 036840 82 SIEKFLTPDWIRQFIHH---ISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-YITVV 153 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~---l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~-~~dvv 153 (327)
..+++++++.+.+. +++++++|+++..+ .+.+..+++.+++.++++++|++. ..+.++++ ++|++
T Consensus 106 ---~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~----~~~~~~l~~~~dil 178 (306)
T 2abq_A 106 ---PLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG----EALHEVLAAKPSFI 178 (306)
T ss_dssp ---CCCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH----HHHHHHGGGCCSEE
T ss_pred ---CCCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh----HHHHHHHhcCCcEE
Confidence 24788877654333 57899999988653 367888999999999999999975 24567888 99999
Q ss_pred eCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCC
Q 036840 154 SPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233 (327)
Q Consensus 154 ~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~ 233 (327)
++|++|+..+++... .+.++ +.++++.+.+.|++.||||+|++|++++.+++
T Consensus 179 ~~N~~E~~~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~------------ 230 (306)
T 2abq_A 179 KPNHHELSELVSKPI------------ASIED----AIPHVQRLIGEGIESILVSFAGDGALFASAEG------------ 230 (306)
T ss_dssp CCBHHHHHHHHTSCC------------CSHHH----HHHHHHHHHHTTCCEEEEECGGGCEEEEETTE------------
T ss_pred ecCHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHcCCCEEEEecCCCceEEEeCCC------------
Confidence 999999999887421 12222 25567778888999999999999999886543
Q ss_pred CCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHH
Q 036840 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKT 313 (327)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~ 313 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++
T Consensus 231 ----------------------------------~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~a 276 (306)
T 2abq_A 231 ----------------------------------MFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAG 276 (306)
T ss_dssp ----------------------------------EEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ----------------------------------EEEEeCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 036840 314 VYAAANV 320 (327)
Q Consensus 314 ~~~~~~~ 320 (327)
++.++..
T Consensus 277 a~~v~~~ 283 (306)
T 2abq_A 277 SATAFSD 283 (306)
T ss_dssp HHHHHSS
T ss_pred HHHhcCc
Confidence 9998764
No 34
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=5.9e-36 Score=281.48 Aligned_cols=244 Identities=21% Similarity=0.243 Sum_probs=201.2
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+| +|+ +++.|++.||+++++.+.++.+|+.++++++++|++++.+.. +
T Consensus 53 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-g 129 (334)
T 2pkf_A 53 VMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP-G 129 (334)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC-G
T ss_pred eecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC-c
Confidence 3578999999999999999999999999999 899 999999999999999887778899999999988888876543 2
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh---hhhhhhcccccceEEeCCHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT---KSRRITSVVKYITVVSPNED 158 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~dvv~~n~~ 158 (327)
+...++++++......+++++++|+++.. ++.+..+++.+++.++++++|++.+. ..+.+.++++++|++++|++
T Consensus 130 -a~~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~ 207 (334)
T 2pkf_A 130 -AMSEARNIKLADVVSAIGKPELVIIGAND-PEAMFLHTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDY 207 (334)
T ss_dssp -GGGGGGGCCHHHHHHHHCSCSEEEEESCC-HHHHHHHHHHHHHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHH
T ss_pred -hhhhCCHhhcChhhhhhcCCCEEEEcCCC-hHHHHHHHHHHHhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHH
Confidence 23445555555433346899999999875 56788888999999999999998642 23556789999999999999
Q ss_pred HHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCc
Q 036840 159 ELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238 (327)
Q Consensus 159 E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
|+..+.+.... +. +.+.+ +++.||||+|++|++++.+++.
T Consensus 208 E~~~l~g~~~~------------~~-----------~~l~~-~~~~vvvt~G~~G~~~~~~~~~---------------- 247 (334)
T 2pkf_A 208 EWDLLLSKTGW------------SE-----------ADVMA-QIDLRVTTLGPKGVDLVEPDGT---------------- 247 (334)
T ss_dssp HHHHHHHHHCC------------CH-----------HHHHT-TCSCEEEECGGGCEEEECTTSC----------------
T ss_pred HHHHHhccCCC------------CH-----------HHHHh-cCCEEEEEeCCCCeEEEeCCCc----------------
Confidence 99999875210 11 12333 3889999999999988865431
Q ss_pred ccccccccccccCCCccCCCCCCCCCcceeEeecCCCCc-ccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHH
Q 036840 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAA 317 (327)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~ 317 (327)
.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|++++++.+
T Consensus 248 -----------------------------~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 298 (334)
T 2pkf_A 248 -----------------------------TIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVL 298 (334)
T ss_dssp -----------------------------EEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------EEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 5778998886 7899999999999999999999999999999999999988
Q ss_pred HH
Q 036840 318 AN 319 (327)
Q Consensus 318 ~~ 319 (327)
+.
T Consensus 299 ~~ 300 (334)
T 2pkf_A 299 ES 300 (334)
T ss_dssp TS
T ss_pred hC
Confidence 65
No 35
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.6e-36 Score=278.50 Aligned_cols=250 Identities=18% Similarity=0.209 Sum_probs=195.6
Q ss_pred eecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecchh
Q 036840 3 YVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVES 82 (327)
Q Consensus 3 ~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~~ 82 (327)
..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.|| +++.+.++.+|+++++.++++|++++.+... .
T Consensus 21 ~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~ 97 (296)
T 2qhp_A 21 KKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEG-V 97 (296)
T ss_dssp EEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSS-C
T ss_pred CCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecC-C
Confidence 468999999999999999999999999999999999999999999 7677776778999988888888877666432 2
Q ss_pred hcccCCHHHHHHHHhhhcCCcEEEEecCC-----CHHHHHHHHHHHHh-CCCCEEEecCch---hhhhhhhcccccceEE
Q 036840 83 IEKFLTPDWIRQFIHHISSASVLMVDANL-----SPPALAASCKIAAE-CNIPVWFEPVSV---TKSRRITSVVKYITVV 153 (327)
Q Consensus 83 ~~~~l~~~~i~~~~~~l~~~~~v~~~g~~-----~~~~~~~l~~~a~~-~~~~v~~d~~~~---~~~~~~~~~l~~~dvv 153 (327)
....+.+.+. ..+.+++++++|+.+.. +.+.+..+++.+++ +++++++|++.+ +..+.+.++++++|++
T Consensus 98 ~~~~l~~~~~--~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil 175 (296)
T 2qhp_A 98 AWDNIPFTDE--LKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNIL 175 (296)
T ss_dssp GGGCCCCCHH--HHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEE
T ss_pred hhhhCCcchh--hHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHHHCCEE
Confidence 2233432211 12456789999987521 23567777888876 689999999753 2234567789999999
Q ss_pred eCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc-CCCEEEEEeCCCceEEEEeccchhhhhcccCC
Q 036840 154 SPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKT 232 (327)
Q Consensus 154 ~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~ 232 (327)
++|++|++.|++....+ .+ .++++++.+.+. |++.||||+|++|++++.+++
T Consensus 176 ~~N~~E~~~l~g~~~~~------------~~----~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~----------- 228 (296)
T 2qhp_A 176 KINDEELVTISRMFGYP------------GI----DLQDKCWILLAKYNLKMLILTCGINGSYVFTPGV----------- 228 (296)
T ss_dssp EEEHHHHHHHHHHTTCT------------TS----CHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTE-----------
T ss_pred ECCHHHHHHHhcccCCC------------CC----CHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCe-----------
Confidence 99999999998863211 01 125566777775 999999999999999887543
Q ss_pred CCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHH
Q 036840 233 KPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAK 312 (327)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa 312 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 229 -----------------------------------~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~ 273 (296)
T 2qhp_A 229 -----------------------------------VSFQETPKVPVADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEV 273 (296)
T ss_dssp -----------------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred -----------------------------------EEEeCCCCCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 036840 313 TVYAAAN 319 (327)
Q Consensus 313 ~~~~~~~ 319 (327)
+++.++.
T Consensus 274 aa~~v~~ 280 (296)
T 2qhp_A 274 SAYVCTQ 280 (296)
T ss_dssp HHHHHTS
T ss_pred HHHHHcC
Confidence 9998864
No 36
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=1.3e-36 Score=283.82 Aligned_cols=242 Identities=16% Similarity=0.211 Sum_probs=197.9
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCC--EEEEEec
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGE--LAAAVAS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~--~~~~~~~ 79 (327)
+..+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++++...++ +|+.++++++ +|+ +++...
T Consensus 35 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~- 110 (320)
T 3ie7_A 35 EFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPE- 110 (320)
T ss_dssp EEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEEC-
T ss_pred eecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeC-
Confidence 4689999999999999999999999999999 999999999999999998844445 8999999988 677 766443
Q ss_pred chhhcccCCHHHHHH----HHhhhcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc-cc
Q 036840 80 VESIEKFLTPDWIRQ----FIHHISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-YI 150 (327)
Q Consensus 80 ~~~~~~~l~~~~i~~----~~~~l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~-~~ 150 (327)
.+ ..+++++++. +.+.+.+++++++++.++ .+.+..+++.+++.++++++|++.. .+.+.+. ++
T Consensus 111 ~g---~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~----~l~~~l~~~~ 183 (320)
T 3ie7_A 111 AG---FTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGE----YLNLAVEMGV 183 (320)
T ss_dssp CC---CCCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHH----HHHHHHHHCC
T ss_pred CC---CCCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH----HHHHHHhcCC
Confidence 22 2477777664 345678999999988653 4788899999999999999999752 3455554 89
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
|++++|++|+..+++.... .+.++ +..+.+. ++.||||+|++|++++.+++
T Consensus 184 dil~~N~~E~~~l~g~~~~-----------~~~~~--------~~~~~~~-~~~vvvt~G~~G~~~~~~~~--------- 234 (320)
T 3ie7_A 184 DFIKPNEDEVIAILDEKTN-----------SLEEN--------IRTLAEK-IPYLVVSLGAKGSICAHNGK--------- 234 (320)
T ss_dssp SEECCBTTGGGGGSCTTCC-----------CHHHH--------HHHHTTT-CSEEEEECGGGCEEEEETTE---------
T ss_pred eEEeeCHHHHHHHhCCCcC-----------CCHHH--------HHHHHhh-CCEEEEEcCCCceEEEeCCc---------
Confidence 9999999999887654110 01111 2233333 89999999999999987654
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 235 -------------------------------------~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~ 277 (320)
T 3ie7_A 235 -------------------------------------LYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVAT 277 (320)
T ss_dssp -------------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred -------------------------------------EEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 036840 311 AKTVYAAANV 320 (327)
Q Consensus 311 aa~~~~~~~~ 320 (327)
++++++++..
T Consensus 278 a~aa~~v~~~ 287 (320)
T 3ie7_A 278 GCSASKVMQQ 287 (320)
T ss_dssp HHHHHHHTSS
T ss_pred HHHHHHHhCc
Confidence 9999988753
No 37
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=5.4e-36 Score=278.19 Aligned_cols=245 Identities=21% Similarity=0.274 Sum_probs=198.1
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEE-ecCCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNI-LDVNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~-~d~~g~~~~~~~~~ 80 (327)
+..+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++++.+.+ .|++++.+ ++++|+++. +...
T Consensus 34 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~--~t~~~~~~~~~~~g~~~~-~~~~ 109 (309)
T 3cqd_A 34 VFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPVATVEAKD--WTRQNLHVHVEASGEQYR-FVMP 109 (309)
T ss_dssp EEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCEEEEECSS--CCCCCEEEEETTTCCEEE-EECC
T ss_pred eecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCceeEEcCC--CCeeEEEEEEcCCCCEEE-EEcC
Confidence 4678999999999999999999999999998 89999999999999999887654 36666777 788888754 3332
Q ss_pred hhhcccCCHHHHHHH----HhhhcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhc-ccccc-
Q 036840 81 ESIEKFLTPDWIRQF----IHHISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITS-VVKYI- 150 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~----~~~l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~-~l~~~- 150 (327)
+ ..+++++++.+ .+.+++ +++|+++.++ .+.+..+++.+++.++++++|++... +.+ +.+.+
T Consensus 110 g---~~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~l~~~~~ 181 (309)
T 3cqd_A 110 G---AALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA----LSAALAIGNI 181 (309)
T ss_dssp C---CCCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH----HHHHTTTCCB
T ss_pred C---CCCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH----HHHHHHhCCC
Confidence 2 23677766543 234677 9999998653 57788899999999999999998532 233 23778
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcC-CCEEEEEeCCCceEEEEeccchhhhhcc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKG-IRLVVLTLGSDGVLLCSKELLSSMRIGL 229 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~ 229 (327)
|++++|++|++.+++... .+.++ ++++++.|++.| ++.||||+|++|++++.+++
T Consensus 182 dil~~N~~E~~~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~-------- 237 (309)
T 3cqd_A 182 ELVKPNQKELSALVNREL------------TQPDD----VRKAAQEIVNSGKAKRVVVSLGPQGALGVDSEN-------- 237 (309)
T ss_dssp SEECCBHHHHHHHHTSCC------------CSTTH----HHHHHHHHHHTTSBSCEEEECGGGCEEEECSSC--------
T ss_pred EEEeeCHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHcCCCCEEEEEecCCceEEEECCc--------
Confidence 999999999999887421 11122 255677888888 99999999999999886543
Q ss_pred cCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 230 RKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|
T Consensus 238 --------------------------------------~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 279 (309)
T 3cqd_A 238 --------------------------------------CIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279 (309)
T ss_dssp --------------------------------------EEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred --------------------------------------eEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 678899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHH
Q 036840 310 DAKTVYAAANV 320 (327)
Q Consensus 310 ~aa~~~~~~~~ 320 (327)
++++++.++..
T Consensus 280 ~~~aa~~~~~~ 290 (309)
T 3cqd_A 280 VAAGSAATLNQ 290 (309)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHcCc
Confidence 99999988653
No 38
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=1.2e-36 Score=283.54 Aligned_cols=229 Identities=19% Similarity=0.204 Sum_probs=200.2
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+.++||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++... +.+|+.++++++++|++++....
T Consensus 52 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~-- 128 (310)
T 3go6_A 52 TRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP-- 128 (310)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--
T ss_pred eecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--
Confidence 467999999999999999999999999999999999999999999999988654 56899999999999999876653
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh-hhhhhhcccccceEEeCCHHHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT-KSRRITSVVKYITVVSPNEDEL 160 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~-~~~~~~~~l~~~dvv~~n~~E~ 160 (327)
+++..++ + +.+.++++++++++++.+.+.+..+++.+++.++++++|++... ..+.+.++++++|++++|++|+
T Consensus 129 ga~~~l~--~---~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~ll~~~dil~~N~~Ea 203 (310)
T 3go6_A 129 GANAHLT--P---VPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEA 203 (310)
T ss_dssp GGGGGCC--C---CTTTTTTCSEEEECSSSCHHHHHHHHHHHHHTTCEEEEECCSSSCCHHHHHHHHHHCSEEEEEHHHH
T ss_pred ChhhhHH--H---HHHHhhcCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCccccchHHHHHHHhhCCEEEeCHHHH
Confidence 2334455 2 24678899999999988889999999999999999999998754 2455678899999999999998
Q ss_pred HHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCccc
Q 036840 161 VAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRD 240 (327)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
+.|++ .++.||||+|++|++++.+++
T Consensus 204 ~~l~g-----------------------------------~~~~vvvt~G~~Ga~~~~~~~------------------- 229 (310)
T 3go6_A 204 NDWPS-----------------------------------PPTHFVITLGVRGARYVGADG------------------- 229 (310)
T ss_dssp HHSSS-----------------------------------CCSEEEEECGGGCEEEEETTE-------------------
T ss_pred HHHhC-----------------------------------CCCEEEEEECCCCEEEEECCc-------------------
Confidence 76532 078999999999999987654
Q ss_pred ccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHc----CCCchhhcccchHHHHHH
Q 036840 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS----GLDVMQSVAVDDAKTVYA 316 (327)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~----g~~~~~al~~a~aa~~~~ 316 (327)
.+++|+++++++|||||||+|+|||+++|++ |+++++|+++|+++++++
T Consensus 230 ---------------------------~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~ 282 (310)
T 3go6_A 230 ---------------------------VFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALA 282 (310)
T ss_dssp ---------------------------EEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------eEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999 999999999999999998
Q ss_pred HHH
Q 036840 317 AAN 319 (327)
Q Consensus 317 ~~~ 319 (327)
++.
T Consensus 283 v~~ 285 (310)
T 3go6_A 283 TLV 285 (310)
T ss_dssp TTS
T ss_pred hCC
Confidence 865
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.1e-36 Score=281.48 Aligned_cols=245 Identities=18% Similarity=0.207 Sum_probs=200.2
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcC--CCccCeeecCCCCceEEEEEecCCCCEEEEEec
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAG--LSTEGIRRQKDIDTAVVSNILDVNGELAAAVAS 79 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~g--V~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~ 79 (327)
+..+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.| |+++++.+.+ .|++++.+++++|++.+.+..
T Consensus 47 ~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~~ 123 (331)
T 2ajr_A 47 QMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEG--ETRENIEIIDEKNKTITAINF 123 (331)
T ss_dssp EEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEEC
T ss_pred EEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC--CCeEEEEEEeCCCceEEEEeC
Confidence 4678999999999999999999999999998 9999999999999 9999887654 488888888888888444544
Q ss_pred chhhcccCCHHHHHHH----HhhhcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc---
Q 036840 80 VESIEKFLTPDWIRQF----IHHISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--- 148 (327)
Q Consensus 80 ~~~~~~~l~~~~i~~~----~~~l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--- 148 (327)
.+. .+++++++.+ .+.+++++++++++.++ .+.+..+++.+++.+++++||++.. .+.++++
T Consensus 124 ~g~---~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~----~~~~~l~~~~ 196 (331)
T 2ajr_A 124 PGP---DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPR----LLERIYEGPE 196 (331)
T ss_dssp CCC---CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHH----HHHHHHHSSC
T ss_pred CCC---CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChH----HHHHHHhcCC
Confidence 332 3777776653 34578999999998654 3678889999999999999999853 3444554
Q ss_pred cceEEeCCHHH-HHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhh
Q 036840 149 YITVVSPNEDE-LVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227 (327)
Q Consensus 149 ~~dvv~~n~~E-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 227 (327)
++|++++|++| +..+++... .+.++ ++++++.|++. ++.||||+|++|++++.+++
T Consensus 197 ~~dil~~N~~E~~~~l~g~~~------------~~~~~----~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~------ 253 (331)
T 2ajr_A 197 FPNVVKPDLRGNHASFLGVDL------------KTFDD----YVKLAEKLAEK-SQVSVVSYEVKNDIVATREG------ 253 (331)
T ss_dssp CCSEECCCCTTCCSCBTTBCC------------CSHHH----HHHHHHHHHHH-SSEEEEEETTTEEEEECSSC------
T ss_pred CCeEEEeCccchHHHHhCCCC------------CCHHH----HHHHHHHHHHh-cCEEEEeecCCceEEEeCCc------
Confidence 49999999999 887655311 11222 25566777777 99999999999999886543
Q ss_pred cccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeec-CCCCcccccCCCchhHHHHHHHHHH-cCCCchhh
Q 036840 228 GLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFP-ALPASVVRLTGAGDCLVGGTLASIS-SGLDVMQS 305 (327)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vvdttGAGDaF~ag~l~~l~-~g~~~~~a 305 (327)
.+++| +++++++|||||||+|+|||+++|+ +|+++++|
T Consensus 254 ----------------------------------------~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~~~~a 293 (331)
T 2ajr_A 254 ----------------------------------------VWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEM 293 (331)
T ss_dssp ----------------------------------------EEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSCHHHH
T ss_pred ----------------------------------------EEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCCHHHH
Confidence 67888 8888999999999999999999999 99999999
Q ss_pred cccchHHHHHHHHH
Q 036840 306 VAVDDAKTVYAAAN 319 (327)
Q Consensus 306 l~~a~aa~~~~~~~ 319 (327)
+++|++++++.++.
T Consensus 294 l~~A~a~aa~~v~~ 307 (331)
T 2ajr_A 294 AKFGFASALAATRR 307 (331)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999998865
No 40
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1e-35 Score=279.08 Aligned_cols=239 Identities=21% Similarity=0.274 Sum_probs=197.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecC-CcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGL-DMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~-D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~ 80 (327)
+..+||++.|+|.+|++||.++.++|.+|+ | +|+ +++.|++.||+++++.+.++.+|+.++++++++|++.+.+..
T Consensus 43 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~- 119 (326)
T 3b1n_A 43 RREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHP- 119 (326)
T ss_dssp CCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEEC-
T ss_pred eeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEec-
Confidence 457899999999999999999999999999 9 899 999999999999998887778899999999988888765543
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh---hhhhhhcccccceEEeCCH
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT---KSRRITSVVKYITVVSPNE 157 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~dvv~~n~ 157 (327)
+ +...+++++++ .. ++++++++++.. ++.+..+++.+++.+++++||++.+. ..+.+.++++++|++++|+
T Consensus 120 g-a~~~~~~~~~~---~~-~~~~~v~~~~~~-~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~ 193 (326)
T 3b1n_A 120 G-AMMQSHVNHAG---EA-KDIKLAIVGPDG-FQGMVQHTEELAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVND 193 (326)
T ss_dssp G-GGGGGGGSCGG---GC-CSCSEEEECSCC-HHHHHHHHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEH
T ss_pred C-hhhhcChhhcc---cc-cCCCEEEECCcc-HHHHHHHHHHHHHCCCEEEEeCchhhhhccHHHHHHHHHhCCEEecCH
Confidence 2 23334444433 22 789999998764 56788889999999999999998642 2345678899999999999
Q ss_pred HHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCC
Q 036840 158 DELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGF 237 (327)
Q Consensus 158 ~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
+|+..+++.... +. +.+.+ +++.||||+|++|++++.+++
T Consensus 194 ~Ea~~l~g~~~~------------~~-----------~~l~~-~~~~vvvT~G~~Ga~~~~~~~---------------- 233 (326)
T 3b1n_A 194 YEAKLVCDKTGW------------SE-----------DEIAS-RVQALIITRGEHGATIRHRDG---------------- 233 (326)
T ss_dssp HHHHHHHHHHCC------------CH-----------HHHHT-TSSEEEEECGGGCEEEEETTE----------------
T ss_pred HHHHHHhCCCCC------------CH-----------HHHHh-cCCEEEEecCCCceEEEECCc----------------
Confidence 999999875210 11 12333 388999999999999987643
Q ss_pred cccccccccccccCCCccCCCCCCCCCcceeEeecCCCCc-ccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHH
Q 036840 238 SRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPAS-VVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYA 316 (327)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~ 316 (327)
.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|++++++.
T Consensus 234 ------------------------------~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~ 283 (326)
T 3b1n_A 234 ------------------------------TEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALK 283 (326)
T ss_dssp ------------------------------EEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------EEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 6788999886 789999999999999999999999999999999999998
Q ss_pred HHH
Q 036840 317 AAN 319 (327)
Q Consensus 317 ~~~ 319 (327)
++.
T Consensus 284 v~~ 286 (326)
T 3b1n_A 284 IAH 286 (326)
T ss_dssp HTS
T ss_pred HcC
Confidence 865
No 41
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=3.1e-35 Score=273.92 Aligned_cols=244 Identities=15% Similarity=0.144 Sum_probs=198.8
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEec-CCCCEEEEEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILD-VNGELAAAVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d-~~g~~~~~~~~~ 80 (327)
...+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|++++++++ ++|+|++.+..
T Consensus 50 ~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~- 128 (312)
T 2hlz_A 50 RWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD- 128 (312)
T ss_dssp EEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEEC-
T ss_pred eeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecC-
Confidence 3578999999999999999999999999999999999999999999999988776667888887775 47888876543
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhC--------CCCEEEecCchhhhhhhhcccccceE
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAEC--------NIPVWFEPVSVTKSRRITSVVKYITV 152 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~--------~~~v~~d~~~~~~~~~~~~~l~~~dv 152 (327)
+ ....+++++++. ..+.+++++|+++.. ++....+++.+++. ++++++|+... .+.+.++++++|+
T Consensus 129 ~-~~~~~~~~~~~~--~~l~~~~~v~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~--~~~~~~~l~~~di 202 (312)
T 2hlz_A 129 R-SLPDVSATDFEK--VDLTQFKWIHIEGRN-ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP--REELFQLFGYGDV 202 (312)
T ss_dssp C-CCCCCCHHHHHT--SCGGGEEEEEEECSS-HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC--CGGGGGGGGSSSE
T ss_pred C-ccccCCHHHhhH--hhhccCCEEEEeccC-HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc--hHHHHHHHhcCCE
Confidence 2 245688888764 356889999999874 56677777777765 67899998753 3467889999999
Q ss_pred EeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCC--CEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 153 VSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGI--RLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 153 v~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
+++|++|+..+ +. .++ +++++.+.+... +.||||+|++|++++..++.
T Consensus 203 l~~n~~ea~~l-g~--------------~~~-------~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~-------- 252 (312)
T 2hlz_A 203 VFVSKDVAKHL-GF--------------QSA-------EEALRGLYGRVRKGAVLVCAWAEEGADALGPDGK-------- 252 (312)
T ss_dssp EEECHHHHHHT-TC--------------CSH-------HHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCC--------
T ss_pred EEEcHHHHHHc-CC--------------CCH-------HHHHHHHHHhcCCCCEEEEEecccCeEEEccCCC--------
Confidence 99999998865 31 111 344556655433 89999999999988864331
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCC-CcccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALP-ASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|
T Consensus 253 -------------------------------------~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a 295 (312)
T 2hlz_A 253 -------------------------------------LLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFG 295 (312)
T ss_dssp -------------------------------------EEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -------------------------------------EEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 67888864 6899999999999999999999999999999999
Q ss_pred hHHHHHHHHH
Q 036840 310 DAKTVYAAAN 319 (327)
Q Consensus 310 ~aa~~~~~~~ 319 (327)
++++++.++.
T Consensus 296 ~~~aa~~v~~ 305 (312)
T 2hlz_A 296 CQVAGKKCGL 305 (312)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhh
Confidence 9999998865
No 42
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.4e-36 Score=281.58 Aligned_cols=263 Identities=16% Similarity=0.185 Sum_probs=201.0
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEE-EEecc
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAA-AVASV 80 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~-~~~~~ 80 (327)
+..+||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.. .+.+|+.+++..+..+++++ .+...
T Consensus 40 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~ 118 (351)
T 2afb_A 40 DVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRA 118 (351)
T ss_dssp EEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECT
T ss_pred eEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCC
Confidence 45789999999999999999999999999999999999999999999999876 45688988877664333332 33333
Q ss_pred hhhcccCCHHHHHHHHhhhcCCcEEEEecCCC------HHHHHHHHHHHHhCCCCEEEecCch---h----hhhhhhccc
Q 036840 81 ESIEKFLTPDWIRQFIHHISSASVLMVDANLS------PPALAASCKIAAECNIPVWFEPVSV---T----KSRRITSVV 147 (327)
Q Consensus 81 ~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~------~~~~~~l~~~a~~~~~~v~~d~~~~---~----~~~~~~~~l 147 (327)
+.+...+++++++ ....+++++++|+++..+ .+.+..+++.+++.+++++||++.+ | ..+.+.+++
T Consensus 119 ~~a~~~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll 197 (351)
T 2afb_A 119 HSAISEAKREDFD-WEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFM 197 (351)
T ss_dssp TCTTTTCCGGGCC-HHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHG
T ss_pred CChhhhCChhhCC-HHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHH
Confidence 3333446665553 224568999999997542 2677888899999999999999852 1 124567789
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc-CCCEEEEEeCCCce--------EEEE
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDGV--------LLCS 218 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~--------~~~~ 218 (327)
+++|++++|++|+..|++.... .+ ..++...+.++ ++++++.|.+. |++.||||+|++|+ +++.
T Consensus 198 ~~~dil~~N~~E~~~l~g~~~~--~~-~~~~~~~~~~~----~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~ 270 (351)
T 2afb_A 198 EYVDVLIANEEDIEKVLGISVE--GL-DLKTGKLNREA----YAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFE 270 (351)
T ss_dssp GGCSEEEECHHHHHHHHCCCCS--CC--------CHHH----HHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEE
T ss_pred hhCCEEEecHHHHHHHhCCCcc--cc-cccccccchhh----HHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEe
Confidence 9999999999999998874210 00 00000012222 35667777774 99999999999975 5654
Q ss_pred eccchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHc
Q 036840 219 KELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS 298 (327)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~ 298 (327)
+++ .+++|+++++++|||||||+|+|||+++|++
T Consensus 271 ~~~----------------------------------------------~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~ 304 (351)
T 2afb_A 271 NGQ----------------------------------------------PHFSNRYEIHIVDRVGAGDSFAGALIYGSLM 304 (351)
T ss_dssp TTE----------------------------------------------EEECCCEEEECSCCTTHHHHHHHHHHHHHHH
T ss_pred CCc----------------------------------------------EEEcCCCCCccCCCCCchHHHHHHHHHHHHc
Confidence 432 6788998889999999999999999999999
Q ss_pred CCCchhhcccchHHHHHHHHH
Q 036840 299 GLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 299 g~~~~~al~~a~aa~~~~~~~ 319 (327)
|+++++|+++|++++++.++.
T Consensus 305 g~~l~~a~~~A~~~aa~~v~~ 325 (351)
T 2afb_A 305 GFDSQKKAEFAAAASCLKHTI 325 (351)
T ss_dssp TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998865
No 43
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=4e-35 Score=274.39 Aligned_cols=245 Identities=17% Similarity=0.236 Sum_probs=198.7
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++++.+.+ .|++++.+++++ +++ .+...+
T Consensus 34 ~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~--~t~~~~~~~~~~-~~~-~~~~~g 108 (323)
T 2f02_A 34 TKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKKANIPQAFTSIKE--ETRDSIAILHEG-NQT-EILEAG 108 (323)
T ss_dssp EEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS--CCEEEEEEEETT-EEE-EEEECC
T ss_pred EEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC--CCeeEEEEEcCC-CeE-EEECCC
Confidence 457899999999999999999999999997 589999999999999999887654 478888888765 444 444332
Q ss_pred hhcccCCHHHHHHHH----hhhcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc---ccc
Q 036840 82 SIEKFLTPDWIRQFI----HHISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV---KYI 150 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~----~~l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l---~~~ 150 (327)
..+++++++.+. +.+++++++++++.++ .+.+..+++.+++.+++++||++.. .+.+++ +++
T Consensus 109 ---~~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~----~~~~~l~~~~~~ 181 (323)
T 2f02_A 109 ---PTVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGD----SLRQVLQGPWKP 181 (323)
T ss_dssp ---CBCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTH----HHHHHHHSSCCC
T ss_pred ---CCCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChH----HHHHHHhccCCC
Confidence 247777766432 3568999999988654 3678889999999999999999863 234444 589
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccch-HHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSA-ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGL 229 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~ 229 (327)
|++++|++|+..|++.... .+. ++ +.++++.|++.|++.||||+|++|++++.+++
T Consensus 182 dil~~N~~E~~~l~g~~~~-----------~~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------- 238 (323)
T 2f02_A 182 YLIKPNLEELEGLLGQDFS-----------ENPLAA----VQTALTKPMFAGIEWIVISLGKDGAIAKHHDQ-------- 238 (323)
T ss_dssp SEECCBHHHHHHHHTCCCC-----------SSCHHH----HHHHHTSGGGTTCSEEEEECGGGCEEEEETTE--------
T ss_pred eEEecCHHHHHHHhCCCCC-----------CCcHHH----HHHHHHHHHHcCCCEEEEeecCCceEEEeCCC--------
Confidence 9999999999998774110 011 22 24556677778999999999999999887653
Q ss_pred cCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 230 RKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|
T Consensus 239 --------------------------------------~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A 280 (323)
T 2f02_A 239 --------------------------------------FYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWG 280 (323)
T ss_dssp --------------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred --------------------------------------EEEEcCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 678899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHH
Q 036840 310 DAKTVYAAAN 319 (327)
Q Consensus 310 ~aa~~~~~~~ 319 (327)
++++++.++.
T Consensus 281 ~~~aa~~v~~ 290 (323)
T 2f02_A 281 MAAGMANAQE 290 (323)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHcC
Confidence 9999998875
No 44
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=3.5e-35 Score=281.10 Aligned_cols=263 Identities=19% Similarity=0.199 Sum_probs=203.2
Q ss_pred ceecCCchHHHHHHHHHc---CCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEe
Q 036840 2 NYVLGGVARNVAECMSKL---GSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVA 78 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~L---G~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~ 78 (327)
+..+||+++|+|.+|++| |.++.|+|.+|+|.+|+.+++.|++.||++.++. .++.+|+.++++++ +|+|++...
T Consensus 84 ~~~~GG~~~NvA~~la~Lg~~g~~v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~ 161 (383)
T 2abs_A 84 TSLPGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH 161 (383)
T ss_dssp EEEEESHHHHHHHHHHHHHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE
T ss_pred eeeCCChHHHHHHHHHHhccCCCcEEEEEEecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec
Confidence 457899999999999999 8999999999999999999999999999999876 45678999999987 677765432
Q ss_pred cchhhcccCCHHHHHHHHhhhcCCcEEEEec---CCCHHHHHHHHHHHHh-CCCCEEEecCchhh----hhhhhcccccc
Q 036840 79 SVESIEKFLTPDWIRQFIHHISSASVLMVDA---NLSPPALAASCKIAAE-CNIPVWFEPVSVTK----SRRITSVVKYI 150 (327)
Q Consensus 79 ~~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g---~~~~~~~~~l~~~a~~-~~~~v~~d~~~~~~----~~~~~~~l~~~ 150 (327)
.+++..++++ +...+.+.+++++|+++ .++.+.+..+++.+++ .++++++|+..... .+.+.++++++
T Consensus 162 --~~a~~~l~~~--~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~ 237 (383)
T 2abs_A 162 --LGACGSFRLP--EDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHT 237 (383)
T ss_dssp --CGGGGGCCCC--TTHHHHTTTCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTC
T ss_pred --cChhhhCChh--hhhHHHhhcCCEEEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhC
Confidence 2333445544 12235678999999986 3567888999999998 89999999975432 24567789999
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHH------c-CCCEEEEEeCCCceEEEEe----
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLE------K-GIRLVVLTLGSDGVLLCSK---- 219 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~~~---- 219 (327)
|++++|++|++.|++..........-.+...+.+ .++++++.|.+ . |++.||||+|++|++++..
T Consensus 238 dil~pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~----~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~ 313 (383)
T 2abs_A 238 NILFGNEEEFAHLAKVHNLVAAEKTALSTANKEH----AVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADG 313 (383)
T ss_dssp SEEEEEHHHHHHHHHHHTCC----------CHHH----HHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTS
T ss_pred CEEeCCHHHHHHHhcccCcccccccccccccccc----cHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCC
Confidence 9999999999999886311000000000000012 23566677776 3 8999999999999998842
Q ss_pred ccchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC---cccccCCCchhHHHHHHHHH
Q 036840 220 ELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA---SVVRLTGAGDCLVGGTLASI 296 (327)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vvdttGAGDaF~ag~l~~l 296 (327)
++. .+++|++++ +++|||||||+|+|||+++|
T Consensus 314 ~~~---------------------------------------------~~~~~~~~v~~~~vvDttGAGDaF~ag~~~~l 348 (383)
T 2abs_A 314 TVV---------------------------------------------VHEVGVPVVAAEKIVDTNGAGDAFVGGFLYAL 348 (383)
T ss_dssp CEE---------------------------------------------EEEECCCCCCGGGCCCCTTHHHHHHHHHHHHH
T ss_pred CCe---------------------------------------------EEEecCccCCcCCcCcCCChHHHHHHHHHHHH
Confidence 211 677888766 89999999999999999999
Q ss_pred HcCCCchhhcccchHHHHHHHHH
Q 036840 297 SSGLDVMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 297 ~~g~~~~~al~~a~aa~~~~~~~ 319 (327)
++|+++++|+++|++++++.++.
T Consensus 349 ~~g~~l~~al~~A~a~aa~~v~~ 371 (383)
T 2abs_A 349 SQGKTVKQCIMCGNACAQDVIQH 371 (383)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHTS
T ss_pred HcCCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998865
No 45
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=4.8e-35 Score=271.29 Aligned_cols=243 Identities=22% Similarity=0.333 Sum_probs=197.9
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+ .+|+.+++.|++.||+++++.+.+ .|++++.+ ++|+++. +...+
T Consensus 32 ~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~--~t~~~~~~--~~g~~~~-~~~~g 105 (306)
T 2jg5_A 32 YKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE--DTRINVKL--KTGQETE-INAPG 105 (306)
T ss_dssp EEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEECCEECSS--CCEEEEEE--ESSSEEE-EECCC
T ss_pred EecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCceeEEEcCC--CCeEEEEE--cCCCEEE-EECCC
Confidence 457899999999999999999999999999 699999999999999999887643 47777665 4677754 33322
Q ss_pred hhcccCCHHHHHHHHhh---hcCCcEEEEecCCC----HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc-cceEE
Q 036840 82 SIEKFLTPDWIRQFIHH---ISSASVLMVDANLS----PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-YITVV 153 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~---l~~~~~v~~~g~~~----~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~-~~dvv 153 (327)
..+++++++.+.+. +++++++++++.++ .+.+..+++.+++.++++++|++.. .+.++++ .+|++
T Consensus 106 ---~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~----~~~~~l~~~~dil 178 (306)
T 2jg5_A 106 ---PHITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKE----LAESVLPYHPLFI 178 (306)
T ss_dssp ---CCCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHH----HHHHHGGGCCSEE
T ss_pred ---CCCCHHHHHHHHHHHHhccCCCEEEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChH----HHHHHHhcCCeEE
Confidence 24778777654333 57899999988654 3678888999999999999999752 3455677 59999
Q ss_pred eCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCC
Q 036840 154 SPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTK 233 (327)
Q Consensus 154 ~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~ 233 (327)
++|++|+..+++... .+.++ +.++++.+.+.|++.|++|+|++|++++.+++
T Consensus 179 ~~N~~E~~~l~g~~~------------~~~~~----~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~------------ 230 (306)
T 2jg5_A 179 KPNKDELEVMFNTTV------------NSDAD----VIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEI------------ 230 (306)
T ss_dssp CCBHHHHHHHTTSCC------------CSHHH----HHHHHHHHHHTTCSCEEEECGGGCEEEECSSE------------
T ss_pred ecCHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHcCCCEEEEccCCCceEEEeCCc------------
Confidence 999999998876411 11222 25567778888999999999999999886543
Q ss_pred CCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHH
Q 036840 234 PYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKT 313 (327)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~ 313 (327)
.+++|+++++++|||||||+|+|||+++|++|+++++|+++|++++
T Consensus 231 ----------------------------------~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~a 276 (306)
T 2jg5_A 231 ----------------------------------SIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACG 276 (306)
T ss_dssp ----------------------------------EEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ----------------------------------EEEEeCCcccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6788999899999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 036840 314 VYAAAN 319 (327)
Q Consensus 314 ~~~~~~ 319 (327)
++.++.
T Consensus 277 a~~v~~ 282 (306)
T 2jg5_A 277 TATAFD 282 (306)
T ss_dssp HHHHTS
T ss_pred HHHHcC
Confidence 998865
No 46
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=6.1e-36 Score=278.62 Aligned_cols=238 Identities=23% Similarity=0.272 Sum_probs=198.7
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|.+|+.+++.|++.||+++++.+.++.+|+.+++.+++ |++++.+.+ +
T Consensus 29 ~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~-~ 106 (313)
T 3ewm_A 29 EKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYD-D 106 (313)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECC-S
T ss_pred eecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeec-c
Confidence 46899999999999999999999999999999999999999999999999988888899999988775 888876653 3
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC-----CCHHHHHHHHHHHHhCCCCEEEecCch---hh------hhhhhccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN-----LSPPALAASCKIAAECNIPVWFEPVSV---TK------SRRITSVV 147 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~-----~~~~~~~~l~~~a~~~~~~v~~d~~~~---~~------~~~~~~~l 147 (327)
.....+++++++. +.+++++++++++. .+.+.+..+++.++ .+++++||++.. |. .+.+.+++
T Consensus 107 ~a~~~l~~~~~~~--~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l 183 (313)
T 3ewm_A 107 VAYFNMTLNDINW--DIVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESI 183 (313)
T ss_dssp SGGGCCCGGGCCH--HHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHH
T ss_pred CHHHhCChhhCCH--HHhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHH
Confidence 3345677776653 45778999999874 24467788888887 478999999753 21 24567788
Q ss_pred ccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhh
Q 036840 148 KYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRI 227 (327)
Q Consensus 148 ~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 227 (327)
+++|++++|++|++.+.+... ...+...||||+|++|++++.+++
T Consensus 184 ~~~di~~~N~~E~~~l~~~~~-----------------------------~~~~~~~vviT~G~~G~~~~~~~~------ 228 (313)
T 3ewm_A 184 KLADIVKASEEEVLYLENQGV-----------------------------EVKGSMLTAITLGPKGCRLIKNET------ 228 (313)
T ss_dssp HHCSEEEEEHHHHHHHHTTTC-----------------------------CCCCSSEEEEECGGGEEEEEETTE------
T ss_pred hhCCEEecCHHHHHHHhccCc-----------------------------cccCceEEEEEECCCCeEEEECCe------
Confidence 999999999999998765310 012466799999999999987654
Q ss_pred cccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHH--cCCCchhh
Q 036840 228 GLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASIS--SGLDVMQS 305 (327)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~--~g~~~~~a 305 (327)
.+++|+++++++|||||||+|+|||+++|+ +|+++++|
T Consensus 229 ----------------------------------------~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a 268 (313)
T 3ewm_A 229 ----------------------------------------VVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLDLLKL 268 (313)
T ss_dssp ----------------------------------------EEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred ----------------------------------------eEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHH
Confidence 788999999999999999999999999999 99999999
Q ss_pred cccchHHHHHHHHH
Q 036840 306 VAVDDAKTVYAAAN 319 (327)
Q Consensus 306 l~~a~aa~~~~~~~ 319 (327)
+++|++++++.++.
T Consensus 269 ~~~A~~~aa~~v~~ 282 (313)
T 3ewm_A 269 GKFANLVAALSTQK 282 (313)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcc
Confidence 99999999998765
No 47
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=4.4e-36 Score=283.74 Aligned_cols=255 Identities=15% Similarity=0.070 Sum_probs=186.5
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+.++||+++|+|.+|++||.++.|+|.+|+|.+|+.+++.|++.||+++++...++.+|+.++...+..+.+.+.+....
T Consensus 52 ~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 131 (351)
T 4gm6_A 52 DIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQH 131 (351)
T ss_dssp EEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTT
T ss_pred EEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEcccc
Confidence 46789999999999999999999999999999999999999999999999988877666655555556666676665433
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecC------CCHHHHHHHHHHHHhCCCCEEEecCch---h----hhhhhhcccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDAN------LSPPALAASCKIAAECNIPVWFEPVSV---T----KSRRITSVVK 148 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~------~~~~~~~~l~~~a~~~~~~v~~d~~~~---~----~~~~~~~~l~ 148 (327)
.....+.+.+++ +.+.+++++++|+++. .+.+.+.++++.|++.|++|+||++.+ | ..+.+.++++
T Consensus 132 ~a~~~~~~~d~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~ 210 (351)
T 4gm6_A 132 SSFARHKSMDWD-LSELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLP 210 (351)
T ss_dssp CHHHHCCCCCCC-HHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGG
T ss_pred chhhhCCccccC-HHHHHhhcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHH
Confidence 322223222221 2356789999999862 123667889999999999999999753 2 1345678899
Q ss_pred cceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHH----cCCCEEEEEeCC--CceEEEEeccc
Q 036840 149 YITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLE----KGIRLVVLTLGS--DGVLLCSKELL 222 (327)
Q Consensus 149 ~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~vvvt~G~--~G~~~~~~~~~ 222 (327)
++|++++|++|+..+++.... ..+.. +...+.+.. .+.+.++++.+. .+..++..++
T Consensus 211 ~~dil~~N~~Ea~~l~g~~~~-------------~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~- 273 (351)
T 4gm6_A 211 LVDYCSAGQMDAVAFFEISSE-------------TTDYY---QAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGE- 273 (351)
T ss_dssp GCSEEECCHHHHHHTSCCCTT-------------CSCHH---HHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTE-
T ss_pred hCCccccCHHHHHHHhCCCCc-------------hhHHH---HHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCc-
Confidence 999999999999988664211 11111 111111111 122334555444 3455555543
Q ss_pred hhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC-cccccCCCchhHHHHHHHHHHcCCC
Q 036840 223 SSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSGLD 301 (327)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvdttGAGDaF~ag~l~~l~~g~~ 301 (327)
.++.|++++ ++||||||||+|+|||+++|++|++
T Consensus 274 ---------------------------------------------~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~ 308 (351)
T 4gm6_A 274 ---------------------------------------------CWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR 308 (351)
T ss_dssp ---------------------------------------------EEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred ---------------------------------------------eEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC
Confidence 566666654 7999999999999999999999999
Q ss_pred chhhcccchHHHHHHHHH
Q 036840 302 VMQSVAVDDAKTVYAAAN 319 (327)
Q Consensus 302 ~~~al~~a~aa~~~~~~~ 319 (327)
+++|+++|+++++++++.
T Consensus 309 ~~~al~~A~aaaal~v~~ 326 (351)
T 4gm6_A 309 PDETVKFATAAAGLKHSI 326 (351)
T ss_dssp HHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999999999864
No 48
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.9e-34 Score=268.80 Aligned_cols=243 Identities=18% Similarity=0.241 Sum_probs=193.6
Q ss_pred ceecCCchHHHHHHHHHcCC-CceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEE--EecCCCCEEEEEe
Q 036840 2 NYVLGGVARNVAECMSKLGS-KPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSN--ILDVNGELAAAVA 78 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~-~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~--~~d~~g~~~~~~~ 78 (327)
+..+||++.|+|.+|++||. ++.++|.+|+| +|+.+++.|++.||+++++.+.++.+|....- ..+.++.+.+...
T Consensus 24 ~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~ 102 (313)
T 3kd6_A 24 DNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ 102 (313)
T ss_dssp EEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecc
Confidence 46799999999999999999 99999999999 99999999999999999998877666743211 1233444443322
Q ss_pred cchhhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhh---hhhhhcccccceEEeC
Q 036840 79 SVESIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTK---SRRITSVVKYITVVSP 155 (327)
Q Consensus 79 ~~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~---~~~~~~~l~~~dvv~~ 155 (327)
.+. ...+.+. +.+.+++++++++.+ ++++....+++.+ +.+.++++|+...|. .+.+.++++++|++++
T Consensus 103 -~~~-~~~~~~~----~~~~~~~~~~v~~~~-~~~~~~~~~~~~~-~~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~ 174 (313)
T 3kd6_A 103 -LNV-FAEFDPH----VPQYYRDSKFVCLGN-IDPELQLKVLDQI-DDPKLVVCDTMNFWIEGKPEELKKVLARVDVFIV 174 (313)
T ss_dssp -CGG-GTTCCCC----CCGGGTTCSEEEECS-SCHHHHHHHHTTC-SSCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEE
T ss_pred -cch-HhhcCcc----chHHHccCCEEEEcC-CCHHHHHHHHHHH-hhCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEe
Confidence 122 2234432 224678999999954 5677777777777 678899999965442 3566788999999999
Q ss_pred CHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCC
Q 036840 156 NEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPY 235 (327)
Q Consensus 156 n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~ 235 (327)
|++|++.|++. . .++++++.|++.|++.||||+|++|++++.+++
T Consensus 175 N~~E~~~l~g~--------------~-------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~-------------- 219 (313)
T 3kd6_A 175 NDSEARLLSGD--------------P-------NLVKTARIIREMGPKTLIIKKGEHGALLFTDNG-------------- 219 (313)
T ss_dssp EHHHHHHHHSC--------------S-------CHHHHHHHHHTTSCSEEEEECTTSCEEEEETTE--------------
T ss_pred CHHHHHHHhCC--------------C-------CHHHHHHHHHHcCCCEEEEeeCCCcEEEEECCc--------------
Confidence 99999998763 1 135667888888999999999999999987654
Q ss_pred CCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCC-cccccCCCchhHHHHHHHHHHcCC-----Cchhhcccc
Q 036840 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPA-SVVRLTGAGDCLVGGTLASISSGL-----DVMQSVAVD 309 (327)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vvdttGAGDaF~ag~l~~l~~g~-----~~~~al~~a 309 (327)
.+++|++++ +++|||||||+|+|||+++|++|+ ++++|+++|
T Consensus 220 --------------------------------~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a 267 (313)
T 3kd6_A 220 --------------------------------IFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYG 267 (313)
T ss_dssp --------------------------------EEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------------eEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHH
Confidence 788999988 799999999999999999999998 899999999
Q ss_pred hHHHHHHHHHH
Q 036840 310 DAKTVYAAANV 320 (327)
Q Consensus 310 ~aa~~~~~~~~ 320 (327)
++++++.++..
T Consensus 268 ~~~aa~~v~~~ 278 (313)
T 3kd6_A 268 SAMASFCVEQF 278 (313)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHHeec
Confidence 99999988653
No 49
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=7e-34 Score=264.34 Aligned_cols=225 Identities=16% Similarity=0.157 Sum_probs=184.9
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
...+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++.||+++++.+.++.+|+.+++++++ |+|++.... +
T Consensus 52 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~-g 128 (306)
T 3bf5_A 52 RPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQ-G 128 (306)
T ss_dssp EEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEEC-T
T ss_pred EecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeC-C
Confidence 3578999999999999999999999999999 999999999999999999877777789999999988 888775543 2
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh---hhhhhhcccccceEEeCCHH
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT---KSRRITSVVKYITVVSPNED 158 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~---~~~~~~~~l~~~dvv~~n~~ 158 (327)
++..++ +++ + .+++++|+++.. ....+++.+++ ++++|++... ..+.+.++++++|++++|++
T Consensus 129 -a~~~~~-~~l----~--~~~~~v~~~~~~---~~~~~~~~a~~---~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~ 194 (306)
T 3bf5_A 129 -AMAAWA-PQL----A--DEYEYVHFSTGP---NYLDMAKSIRS---KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDH 194 (306)
T ss_dssp -HHHHCC-CCC----C--SCEEEEEECSSS---SHHHHHHHCCS---EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHH
T ss_pred -hhhhhh-Hhh----c--CCCCEEEECChH---HHHHHHHHhCC---cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHH
Confidence 233344 222 1 679999999765 56677777664 9999998532 13456778899999999999
Q ss_pred HHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCc
Q 036840 159 ELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFS 238 (327)
Q Consensus 159 E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
|+..+++....+ . . .+ .||||+|++|++++.+++
T Consensus 195 E~~~l~g~~~~~--------------~-------~--~l------~vvvT~G~~Ga~~~~~~~----------------- 228 (306)
T 3bf5_A 195 EYRVFREMTGLS--------------S-------P--KV------TTIVTNGERGSSLFMDGK----------------- 228 (306)
T ss_dssp HHHHHHHHHCCS--------------S-------C--SS------CEEEEEGGGEEEEEETTE-----------------
T ss_pred HHHHHhCCCCcC--------------c-------c--cE------EEEEeecccCeEEEeCCc-----------------
Confidence 999988753110 0 0 01 199999999999887643
Q ss_pred ccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHH
Q 036840 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAA 318 (327)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~ 318 (327)
.+++|+++++ +|||||||+|+|||+++|++|+++++|+++|++++++.++
T Consensus 229 -----------------------------~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~ 278 (306)
T 3bf5_A 229 -----------------------------KYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVID 278 (306)
T ss_dssp -----------------------------EEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------EEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 6788999999 9999999999999999999999999999999999999987
Q ss_pred H
Q 036840 319 N 319 (327)
Q Consensus 319 ~ 319 (327)
.
T Consensus 279 ~ 279 (306)
T 3bf5_A 279 D 279 (306)
T ss_dssp H
T ss_pred c
Confidence 6
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.1e-34 Score=265.50 Aligned_cols=237 Identities=12% Similarity=0.078 Sum_probs=184.4
Q ss_pred ceecCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecch
Q 036840 2 NYVLGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVE 81 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~ 81 (327)
+..+||++.|+|.+|++||.++.++|.+|+|. +.+++.|++.||+++++.. ..+|+.+.++ +++|++++....
T Consensus 32 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~~-- 104 (298)
T 1vk4_A 32 EIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFLI-- 104 (298)
T ss_dssp EEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEEE--
T ss_pred EEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEec--
Confidence 46789999999999999999999999999997 7788999999999997654 3356555444 556766554332
Q ss_pred hhcccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh-----------hhhhhhcccccc
Q 036840 82 SIEKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT-----------KSRRITSVVKYI 150 (327)
Q Consensus 82 ~~~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~-----------~~~~~~~~l~~~ 150 (327)
..+..+++++++. ..++++++++....+....+++.+++.++++++|++... ..+.+.++++++
T Consensus 105 ~~~~~l~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 179 (298)
T 1vk4_A 105 SAADPFTESDLAF-----IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYL 179 (298)
T ss_dssp ECCCCCCGGGGGG-----CCSSEEEECCSSTTSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGC
T ss_pred cccccCCHHHcCc-----CCCCEEEECCcccccccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccC
Confidence 2234577766532 579999997643333344667777888999999997411 112456688999
Q ss_pred eEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhccc
Q 036840 151 TVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLR 230 (327)
Q Consensus 151 dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 230 (327)
|++++|++|+..|++.. .++++++.|.+.|++.||||+ ++|++++.+ +
T Consensus 180 dil~~N~~E~~~l~g~~---------------------~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~--------- 227 (298)
T 1vk4_A 180 DLFKVDSREAETLTGTN---------------------DLRESCRIIRSFGAKIILATH-ASGVIVFDG-N--------- 227 (298)
T ss_dssp SEEEEEHHHHHHHHSCS---------------------CHHHHHHHHHHTTCSSEEEEE-TTEEEEESS-S---------
T ss_pred CEEecCHHHHHHHhCCC---------------------CHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-C---------
Confidence 99999999999987631 125566778888999999999 999988765 3
Q ss_pred CCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHc-CCCchhhcccc
Q 036840 231 KTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS-GLDVMQSVAVD 309 (327)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~-g~~~~~al~~a 309 (327)
.+++|+++++++|||||||+|+|||+++|++ |+++++|+++|
T Consensus 228 -------------------------------------~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A 270 (298)
T 1vk4_A 228 -------------------------------------FYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFA 270 (298)
T ss_dssp -------------------------------------EEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred -------------------------------------EEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 6788988889999999999999999999999 99999999999
Q ss_pred hHHHHHHHHH
Q 036840 310 DAKTVYAAAN 319 (327)
Q Consensus 310 ~aa~~~~~~~ 319 (327)
++++++.++.
T Consensus 271 ~a~aa~~v~~ 280 (298)
T 1vk4_A 271 AAVTSVKMRH 280 (298)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHcc
Confidence 9999998764
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.89 E-value=1e-22 Score=189.23 Aligned_cols=220 Identities=13% Similarity=0.099 Sum_probs=152.3
Q ss_pred CceEEEeecCCcchHHHHHHHHhcCCCccCeeec--CCCCceEEEEEecCCCCEEEEEecchhhcccCCHHHHHHHHhh-
Q 036840 22 KPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQ--KDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQFIHH- 98 (327)
Q Consensus 22 ~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~--~~~~t~~~~~~~d~~g~~~~~~~~~~~~~~~l~~~~i~~~~~~- 98 (327)
.+.++|.+|+|. |+.+ |++.||++.++... .+ .|+..+ + . + ..+++++++.+.+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~------------~-~-g---~~l~~~~i~~~~~~~ 69 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH------------W-K-G---QVLNSDELQELYEGL 69 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC------------C-C-E---EECCHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC------------c-c-C---ccCCHHHHHHHHHHH
Confidence 366789999998 9988 99999999977553 22 232111 1 0 1 24667777654333
Q ss_pred ----hcCCcEEEEecCCCH---HHHHHHHHHHHhCCCC--EEEecCchhh-------------hhhhhc-ccccceEEeC
Q 036840 99 ----ISSASVLMVDANLSP---PALAASCKIAAECNIP--VWFEPVSVTK-------------SRRITS-VVKYITVVSP 155 (327)
Q Consensus 99 ----l~~~~~v~~~g~~~~---~~~~~l~~~a~~~~~~--v~~d~~~~~~-------------~~~~~~-~l~~~dvv~~ 155 (327)
+++++++++....+. +.+..+++.+++.+.+ +++||+.+.. .+.+.+ +++++|++++
T Consensus 70 ~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~p 149 (312)
T 2yxt_A 70 RLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITP 149 (312)
T ss_dssp HHTTCCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECC
T ss_pred HhcCCccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcC
Confidence 678999886433343 3445777888887754 8899864311 124443 8899999999
Q ss_pred CHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCc------eEEE-------Eeccc
Q 036840 156 NEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG------VLLC-------SKELL 222 (327)
Q Consensus 156 n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G------~~~~-------~~~~~ 222 (327)
|++|++.|++... .+.++ ++++++.|++.|++.||||.|+.| ++++ .+++.
T Consensus 150 N~~Ea~~L~g~~~------------~~~~~----~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~ 213 (312)
T 2yxt_A 150 NQFEAELLSGRKI------------HSQEE----ALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGS 213 (312)
T ss_dssp CHHHHHHHHSCCC------------CSHHH----HHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CC
T ss_pred CHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccc
Confidence 9999999887421 11222 356677888889999999988864 6665 22110
Q ss_pred hhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHc-CCC
Q 036840 223 SSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISS-GLD 301 (327)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~-g~~ 301 (327)
+ .-..+++|++++++ ||+||||+|+|||+++|++ |++
T Consensus 214 ---------------------------------------~--~~~~~~~~~~~v~v-dttGAGDaf~a~~~~~l~~~g~~ 251 (312)
T 2yxt_A 214 ---------------------------------------V--VMERIRMDIRKVDA-VFVGTGDLFAAMLLAWTHKHPNN 251 (312)
T ss_dssp ---------------------------------------C--CEEEEEEEEECCSS-CCSSHHHHHHHHHHHHHHHSTTC
T ss_pred ---------------------------------------c--ccceEEEeecccCC-CCCCchHHHHHHHHHHHHhcCCC
Confidence 0 00057778887876 9999999999999999998 999
Q ss_pred chhhcccchHHHHHHHHHHH
Q 036840 302 VMQSVAVDDAKTVYAAANVL 321 (327)
Q Consensus 302 ~~~al~~a~aa~~~~~~~~~ 321 (327)
+++|+++|+++++..+..-.
T Consensus 252 l~~a~~~A~a~a~~~v~~~~ 271 (312)
T 2yxt_A 252 LKVACEKTVSTLHHVLQRTI 271 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999998866555443
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.87 E-value=5.1e-22 Score=181.97 Aligned_cols=219 Identities=14% Similarity=0.151 Sum_probs=151.7
Q ss_pred CCCceE-EEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecchhhcccCCHHHHHHH---
Q 036840 20 GSKPYM-ISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQF--- 95 (327)
Q Consensus 20 G~~v~~-i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~~~~~~l~~~~i~~~--- 95 (327)
++.... +|.+|+| .....|++.||++.++.. . ++.+..+.+.+.. ..+++++++.+
T Consensus 20 ~i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~g-------~~~~~~~~~~~~~~ 79 (283)
T 2ddm_A 20 AVQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFYG-------GAIPDEWFSGYLRA 79 (283)
T ss_dssp EEEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCCE-------EECCHHHHHHHHHH
T ss_pred EEecccCCCcchHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCceee-------eeCCHHHHHHHHHH
Confidence 444333 6677776 346789999999987632 1 2234455554111 23556665432
Q ss_pred -Hh--hhcCCcEEEEecCCCH---HHHHHHHHHHHh--CCCCEEEecCchhh----------hhhh-hcccccceEEeCC
Q 036840 96 -IH--HISSASVLMVDANLSP---PALAASCKIAAE--CNIPVWFEPVSVTK----------SRRI-TSVVKYITVVSPN 156 (327)
Q Consensus 96 -~~--~l~~~~~v~~~g~~~~---~~~~~l~~~a~~--~~~~v~~d~~~~~~----------~~~~-~~~l~~~dvv~~n 156 (327)
.+ .+++++++++....+. +.+..+++.+++ .+++++|||+.+.. .+.+ .++++++|++++|
T Consensus 80 l~~~~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN 159 (283)
T 2ddm_A 80 LQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPN 159 (283)
T ss_dssp HHHTTCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCB
T ss_pred HHhcCCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCC
Confidence 22 3567899998653332 456667777777 78999999864321 1222 4578999999999
Q ss_pred HHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCC-------ceEEEEeccchhhhhcc
Q 036840 157 EDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSD-------GVLLCSKELLSSMRIGL 229 (327)
Q Consensus 157 ~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~ 229 (327)
++|++.|++... .+.++ +.++++.+.+.|++.||+|.|+. |++++.+++
T Consensus 160 ~~E~~~L~g~~~------------~~~~~----~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~-------- 215 (283)
T 2ddm_A 160 IFELEILTGKNC------------RDLDS----AIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADS-------- 215 (283)
T ss_dssp HHHHHHHHTSCC------------SSHHH----HHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTE--------
T ss_pred HHHHHHHhCCCC------------CCHHH----HHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCc--------
Confidence 999999987421 11122 35667778778999999999999 888876543
Q ss_pred cCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 230 RKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+++|++++. +||+||||+|+|+|+++|++|+++++|+++|
T Consensus 216 --------------------------------------~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g~~~~~A~~~A 256 (283)
T 2ddm_A 216 --------------------------------------VNVISHSRVK-TDLKGTGDLFCAQLISGLLKGKALTDAVHRA 256 (283)
T ss_dssp --------------------------------------EEEEEEECCC-CCCCCHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred --------------------------------------eEEEeeceeC-CCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5777877775 8999999999999999999999999999999
Q ss_pred hHHHHHHHHHHH
Q 036840 310 DAKTVYAAANVL 321 (327)
Q Consensus 310 ~aa~~~~~~~~~ 321 (327)
+++++..+....
T Consensus 257 ~a~a~~~v~~~~ 268 (283)
T 2ddm_A 257 GLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999977776543
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.85 E-value=9.5e-21 Score=174.23 Aligned_cols=224 Identities=16% Similarity=0.154 Sum_probs=145.6
Q ss_pred CceEEEeecCCcchHHHHHHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecchhhcccCCHHHHHH-HHhhhc
Q 036840 22 KPYMISALGLDMAGNILLEHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQ-FIHHIS 100 (327)
Q Consensus 22 ~v~~i~~vG~D~~g~~i~~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~~~~~~l~~~~i~~-~~~~l~ 100 (327)
...+++..|+|.+|..-... +..-+.......++...++...+....... ..+.++.+.. +...+.
T Consensus 25 ~~~vl~i~G~D~~ggagi~a------~~~~~~~~g~~g~~~it~~~~~n~~~~~~~-------~~~~~~~~~~~~~~l~~ 91 (288)
T 1jxh_A 25 RINALTIAGTDPSGGAGIQA------DLKTFSALGAYGCSVITALVAENTCGVQSV-------YRIEPDFVAAQLDSVFS 91 (288)
T ss_dssp CCEEEEEEECCTTSSSHHHH------HHHHHHHTTCEEEEEEEEEEEEETTEEEEE-------EECCHHHHHHHHHHHHT
T ss_pred CCEEEEEeCcCCCchHHHHH------HHHHHHHcCCEEeEEeeEEEeecCCCeeee-------eeCCHHHHHHHHHHHHh
Confidence 35689999999877632210 111011111112333333333233222111 1345555432 223333
Q ss_pred --CCcEEEEecCCCHHHHHHHHHHHHhCCCC-EEEecCchhh----------hhhhhc-ccccceEEeCCHHHHHHHHHh
Q 036840 101 --SASVLMVDANLSPPALAASCKIAAECNIP-VWFEPVSVTK----------SRRITS-VVKYITVVSPNEDELVAMANA 166 (327)
Q Consensus 101 --~~~~v~~~g~~~~~~~~~l~~~a~~~~~~-v~~d~~~~~~----------~~~~~~-~l~~~dvv~~n~~E~~~l~~~ 166 (327)
.++++++....+.+.+..+++.+++.+++ +++||..+.. .+.+.+ +++++|++++|+.|++.|++.
T Consensus 92 ~~~~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 92 DVRIDTTKIGMLAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp TSCCSEEEECCCCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 37888776544678888999999999986 9999875421 123443 789999999999999999874
Q ss_pred -hcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCc-----eEEEEeccchhhhhcccCCCCCCCccc
Q 036840 167 -LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG-----VLLCSKELLSSMRIGLRKTKPYGFSRD 240 (327)
Q Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
.. .+.++ ++++++.+.+.|++.||+|.|++| ++++.+++
T Consensus 172 ~~~------------~~~~~----~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~------------------- 216 (288)
T 1jxh_A 172 PHA------------RTEQE----MLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREG------------------- 216 (288)
T ss_dssp CCC------------CSHHH----HHHHHHHHHHTTCSEEEEBC---------CEEECSSC-------------------
T ss_pred CCC------------CCHHH----HHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCe-------------------
Confidence 11 11222 356677888889999999999999 87775543
Q ss_pred ccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHHHH
Q 036840 241 LYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAANV 320 (327)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~~~ 320 (327)
.+++|+++++++||+||||+|+|+|+++|++|+++++|+++|+++++..+...
T Consensus 217 ---------------------------~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 217 ---------------------------EQRFSAPRVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp ---------------------------EEEC---CCCCSCCBTHHHHHHHHHHHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred ---------------------------EEEEeccccCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 67788888889999999999999999999999999999999999987776543
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.84 E-value=2.7e-20 Score=168.10 Aligned_cols=217 Identities=19% Similarity=0.201 Sum_probs=147.3
Q ss_pred ceEEEeecCCcchHHHH----HHHHhcCCCccCeeecCCCCceEEEEEecCCCCEEEEEecchhhcccCCHHHHHH-HHh
Q 036840 23 PYMISALGLDMAGNILL----EHWKSAGLSTEGIRRQKDIDTAVVSNILDVNGELAAAVASVESIEKFLTPDWIRQ-FIH 97 (327)
Q Consensus 23 v~~i~~vG~D~~g~~i~----~~l~~~gV~~~~i~~~~~~~t~~~~~~~d~~g~~~~~~~~~~~~~~~l~~~~i~~-~~~ 97 (327)
+.+++..|+|.+|..-. ..++..|+ ..++....+...+......+ ..+.++.+.. +..
T Consensus 2 ~~vl~i~G~d~~ggag~~a~~~~~~~~~~----------~g~~~vt~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 64 (258)
T 1ub0_A 2 RVALTIAGSDSGGGAGVQADLKVFFRFGV----------YGTSALTLVTAQNTLGVQRV-------HLLPPEVVYAQIES 64 (258)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTC----------EEEEEEEEEEEEETTEEEEE-------EECCHHHHHHHHHH
T ss_pred CEEEEEeccCCCchHHHHHHHHHHHHhCC----------EEeEeeeEEEeecCCceeEE-------EeCCHHHHHHHHHH
Confidence 35788889887665432 22233222 23444444444344333211 1245554432 222
Q ss_pred hhc--CCcEEEEecCCCHHHHHHHHHHHHhCC-CCEEEecCchhh----------hhhh-hcccccceEEeCCHHHHHHH
Q 036840 98 HIS--SASVLMVDANLSPPALAASCKIAAECN-IPVWFEPVSVTK----------SRRI-TSVVKYITVVSPNEDELVAM 163 (327)
Q Consensus 98 ~l~--~~~~v~~~g~~~~~~~~~l~~~a~~~~-~~v~~d~~~~~~----------~~~~-~~~l~~~dvv~~n~~E~~~l 163 (327)
.+. +.+++++....+.+....+++.+++.+ +++++||+.+.. .+.+ .++++++|++++|+.|++.|
T Consensus 65 ~~~~~~~~~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L 144 (258)
T 1ub0_A 65 VAQDFPLHAAKTGALGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEAL 144 (258)
T ss_dssp HHHHSCCSEEEECCCCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred HHcCCCCCEEEECCcCCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHH
Confidence 333 467777754335577888889899888 899999975321 1233 45789999999999999999
Q ss_pred HHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCC-c----eEEEEeccchhhhhcccCCCCCCCc
Q 036840 164 ANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSD-G----VLLCSKELLSSMRIGLRKTKPYGFS 238 (327)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
++... .+.++ ++++++.+.+.|++.||+|.|+. | ++++.+++
T Consensus 145 ~g~~~------------~~~~~----~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~----------------- 191 (258)
T 1ub0_A 145 LGRPI------------RTLKE----AEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGG----------------- 191 (258)
T ss_dssp HCSCC------------CSHHH----HHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTE-----------------
T ss_pred hCCCC------------CCHHH----HHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCe-----------------
Confidence 87421 11222 35667788888999999999998 8 67765433
Q ss_pred ccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHHHH
Q 036840 239 RDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYAAA 318 (327)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~~~ 318 (327)
.+++|+++++++||+||||+|+|+|+++|++|+++++|+++|+++++..+.
T Consensus 192 -----------------------------~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~~~~a~~~a~~~~~~~~~ 242 (258)
T 1ub0_A 192 -----------------------------VLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALK 242 (258)
T ss_dssp -----------------------------EEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------EEEEeccccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 677888888899999999999999999999999999999999888866654
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.81 E-value=1.4e-18 Score=157.93 Aligned_cols=217 Identities=18% Similarity=0.204 Sum_probs=149.4
Q ss_pred eEEEeecCCcchHH-HHHH---HHhcCCCccCeeecCCCCceEEEEE--ecCCCCEEEEEecchhhcccCCHHHH----H
Q 036840 24 YMISALGLDMAGNI-LLEH---WKSAGLSTEGIRRQKDIDTAVVSNI--LDVNGELAAAVASVESIEKFLTPDWI----R 93 (327)
Q Consensus 24 ~~i~~vG~D~~g~~-i~~~---l~~~gV~~~~i~~~~~~~t~~~~~~--~d~~g~~~~~~~~~~~~~~~l~~~~i----~ 93 (327)
.+++..|.|.+|.. +... ++..|+.. ++....+ .+..+.....+. .+.++.+ +
T Consensus 5 ~vl~i~G~d~~gga~~~a~~~~~~~~g~~~----------~~~vt~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 67 (271)
T 2i5b_A 5 KALTIAGSDSSGGAGIQADLKTFQEKNVYG----------MTALTVIVAMDPNNSWNHQVF-------PIDTDTIRAQLA 67 (271)
T ss_dssp EEEEEEEEETTSSSHHHHHHHHHHHTTCEE----------EEEEEEEEEEETTTTTEEEEE-------ECCHHHHHHHHH
T ss_pred EEEEEeCcCCCchHHHHHHHHHHHHcCCEE----------eEEeeEEEeEcCCCCceeEEE-------eCCHHHHHHHHH
Confidence 57888999977766 6553 44444422 2222222 233342222221 1233333 3
Q ss_pred HHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCC-CEEEecCchhh----------hhhhh-cccccceEEeCCHHHHH
Q 036840 94 QFIHHISSASVLMVDANLSPPALAASCKIAAECNI-PVWFEPVSVTK----------SRRIT-SVVKYITVVSPNEDELV 161 (327)
Q Consensus 94 ~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~-~v~~d~~~~~~----------~~~~~-~~l~~~dvv~~n~~E~~ 161 (327)
.+.+.+ +.+++++....+.+....+++.+++.+. ++++||+.+.. .+.+. ++++++|++++|+.|++
T Consensus 68 ~l~~~~-~~d~v~~G~l~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~ 146 (271)
T 2i5b_A 68 TITDGI-GVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEAS 146 (271)
T ss_dssp HHHHHS-CCSEEEECCCCSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred HHHhCC-CCCEEEECCCCCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHH
Confidence 333323 6788888553356778888999999898 69999864321 12444 67899999999999999
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCC--Cce----EEEEeccchhhhhcccCCCCC
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGS--DGV----LLCSKELLSSMRIGLRKTKPY 235 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~~ 235 (327)
.|++... ..+.++ ++++++.+.+.|.+.||+|.|+ +|+ +++.+++
T Consensus 147 ~L~g~~~-----------~~~~~~----~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~-------------- 197 (271)
T 2i5b_A 147 QLSGMDE-----------LKTVDD----MIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGET-------------- 197 (271)
T ss_dssp HHHTCCC-----------CCSHHH----HHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSC--------------
T ss_pred HHhCCCC-----------CCCHHH----HHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCe--------------
Confidence 9987420 011222 3566778888899999999999 784 5554432
Q ss_pred CCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHH
Q 036840 236 GFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVY 315 (327)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~ 315 (327)
.+++++++++++||+||||+|+|+|+++|++|+++++|+++|+++++.
T Consensus 198 --------------------------------~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~~~~A~~~A~~~~~~ 245 (271)
T 2i5b_A 198 --------------------------------AEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITA 245 (271)
T ss_dssp --------------------------------EEEEEECCCCCSCCBTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred --------------------------------EEEEeccccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 677888888899999999999999999999999999999999988877
Q ss_pred HHHH
Q 036840 316 AAAN 319 (327)
Q Consensus 316 ~~~~ 319 (327)
....
T Consensus 246 ~~~~ 249 (271)
T 2i5b_A 246 AIKE 249 (271)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6643
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.73 E-value=2.5e-17 Score=151.47 Aligned_cols=171 Identities=16% Similarity=0.203 Sum_probs=121.0
Q ss_pred CCHHHHHHHHhh------hcCCcEEEEecCC-CH---HHHHHHHHHHHhCC--CCEEEecCchhh----------hhhhh
Q 036840 87 LTPDWIRQFIHH------ISSASVLMVDANL-SP---PALAASCKIAAECN--IPVWFEPVSVTK----------SRRIT 144 (327)
Q Consensus 87 l~~~~i~~~~~~------l~~~~~v~~~g~~-~~---~~~~~l~~~a~~~~--~~v~~d~~~~~~----------~~~~~ 144 (327)
+++++++.+.+. +.++|++ ..|.+ +. +.+.++++.+++.+ +++++||..... .+.+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~d~v-~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~ 135 (289)
T 3pzs_A 57 MPASHLTDIVQGIADIDRLKDCDAV-LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFC 135 (289)
T ss_dssp CCHHHHHHHHHHHHHTTCGGGCCEE-EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCccCCCEE-EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHH
Confidence 555666554332 3578885 55654 33 34555666666545 789999853221 13444
Q ss_pred -cccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeC-CCce-------E
Q 036840 145 -SVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLG-SDGV-------L 215 (327)
Q Consensus 145 -~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~-------~ 215 (327)
.+++.+|++++|..|++.|++... .+.++ +.++++.|.+.|++.|++|.| .+|+ +
T Consensus 136 ~~ll~~~diitpN~~E~~~L~g~~~------------~~~~~----~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~ 199 (289)
T 3pzs_A 136 NEALPASDMIAPNLLELEQLSGERV------------ENVEQ----AVQVARSLCARGPKVVLVKHLSRAGYHADCFEML 199 (289)
T ss_dssp HTHHHHCSEECCCHHHHHHHHTSCC------------CSHHH----HHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEE
T ss_pred HHhhccCCEEeCCHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEE
Confidence 478899999999999999987521 12222 366778888889999999985 4776 5
Q ss_pred EEEeccchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcc--cccCCCchhHHHHHH
Q 036840 216 LCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASV--VRLTGAGDCLVGGTL 293 (327)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--vdttGAGDaF~ag~l 293 (327)
++.+++ .++++.+++++ +|++|+||+|+|+|+
T Consensus 200 ~~~~~~----------------------------------------------~~~~~~~~~~~~v~dt~GaGD~f~a~~~ 233 (289)
T 3pzs_A 200 LVTADD----------------------------------------------AWHICRPLVDFGKRQPVGVGDLTSGLLL 233 (289)
T ss_dssp EECSSC----------------------------------------------EEEEEEECCCCTTSCCTTHHHHHHHHHH
T ss_pred EEeCCe----------------------------------------------EEEEEeeeecCCCCCCCcHHHHHHHHHH
Confidence 554433 55666665655 999999999999999
Q ss_pred HHHHcCCCchhhcccchHH--HHHHHHHH
Q 036840 294 ASISSGLDVMQSVAVDDAK--TVYAAANV 320 (327)
Q Consensus 294 ~~l~~g~~~~~al~~a~aa--~~~~~~~~ 320 (327)
++|++|+++++|+++|++. .+++.+..
T Consensus 234 ~~l~~g~~~~~A~~~A~~~~~~~i~~t~~ 262 (289)
T 3pzs_A 234 VNLLKGEPLDKALEHVTAAVYEVMLKTQE 262 (289)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998874 66666643
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.67 E-value=4.7e-16 Score=142.56 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=115.7
Q ss_pred CCcEEEEecCCCHHHHHHHHHHHHhC-CCCEEEecCch-----hh------hhhhhcccccceEEeCCHHHHHHHHHhhc
Q 036840 101 SASVLMVDANLSPPALAASCKIAAEC-NIPVWFEPVSV-----TK------SRRITSVVKYITVVSPNEDELVAMANALS 168 (327)
Q Consensus 101 ~~~~v~~~g~~~~~~~~~l~~~a~~~-~~~v~~d~~~~-----~~------~~~~~~~l~~~dvv~~n~~E~~~l~~~~~ 168 (327)
+.|.+.+..-.+.+.+..+++..++. +.+++|||+.+ |. .+.+.++++.+|++++|..|++.|++...
T Consensus 74 ~~daik~G~l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~~ 153 (282)
T 3h74_A 74 HFDQALIGYVGSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAPY 153 (282)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCCC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCCC
Confidence 67888874333667777777777764 67899999643 21 13356789999999999999999987521
Q ss_pred CCCCccCcCCCccchHHHHhcHHHHHHHHHH-cCC-CEEEEEeCC----CceEEEEeccchhhhhcccCCCCCCCccccc
Q 036840 169 GENMFRPIDRNKHSAESLFQTLKPAILVLLE-KGI-RLVVLTLGS----DGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242 (327)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (327)
. +. +.++++++.|.+ .|+ +.|++|.|+ .|++++..+++
T Consensus 154 ~------------~~----~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~-------------------- 197 (282)
T 3h74_A 154 Q------------VT----PDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGH-------------------- 197 (282)
T ss_dssp C------------SS----CCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSC--------------------
T ss_pred C------------CH----HHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCe--------------------
Confidence 1 11 123667788888 899 999999995 67777642221
Q ss_pred ccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHHHH
Q 036840 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTVYA 316 (327)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~~~ 316 (327)
.++++.+++. +|++|+||+|.|+|+++|++|+++++|+++|+++++..
T Consensus 198 -------------------------~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g~~l~~A~~~A~~~~~~a 245 (282)
T 3h74_A 198 -------------------------VQYCGARRLP-GHYNGTGDTLAAVIAGLLGRGYPLAPTLARANQWLNMA 245 (282)
T ss_dssp -------------------------EEEEEEECCS-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred -------------------------EEEEEecCCC-CCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 5566666664 89999999999999999999999999999988874443
No 58
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.66 E-value=1.2e-15 Score=141.07 Aligned_cols=177 Identities=15% Similarity=0.076 Sum_probs=116.5
Q ss_pred cCCHHHHHHHHhhh------cCCcEEEEecCC-CHHHHHHHH---HHHHhCC------CCEEEecCchhh---------h
Q 036840 86 FLTPDWIRQFIHHI------SSASVLMVDANL-SPPALAASC---KIAAECN------IPVWFEPVSVTK---------S 140 (327)
Q Consensus 86 ~l~~~~i~~~~~~l------~~~~~v~~~g~~-~~~~~~~l~---~~a~~~~------~~v~~d~~~~~~---------~ 140 (327)
.+..++++.+.+.+ .++|++.. |.+ +.+.+..+. +..++.+ .+++|||..... .
T Consensus 55 ~~~~~ql~~~~~~~~~~~~~~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~ 133 (300)
T 3zs7_A 55 RMSLQEYDELMEGVRANNFLSNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVL 133 (300)
T ss_dssp ECCHHHHHHHHHHHHHTTCGGGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHH
T ss_pred cCCHHHHHHHHHHHHhcCCcccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHH
Confidence 35666665544433 36787666 544 454444444 4444333 789999964321 1
Q ss_pred hhhhcccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCc----e--
Q 036840 141 RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG----V-- 214 (327)
Q Consensus 141 ~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G----~-- 214 (327)
+.++++++.+|++++|..|++.|++... .+.++ ++++++.|.+.|++.|+||.|+.| +
T Consensus 134 ~~~~~Ll~~adiitPN~~Ea~~L~g~~~------------~~~~~----~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~ 197 (300)
T 3zs7_A 134 DAYRELVPLADIVTPNYFEASLLSGVTV------------NDLSS----AILAADWFHNCGVAHVIIKSFREQENPTHLR 197 (300)
T ss_dssp HHHHHHGGGCSEECCCHHHHHHHHSSCC------------CSHHH----HHHHHHHHHHHTCSEEEEEEEC---CCSEEE
T ss_pred HHHHHHhhhCCEecCCHHHHHHHhCCCC------------CCHHH----HHHHHHHHHHhCCCEEEEecCcCCCCCceEE
Confidence 3456689999999999999999987521 12222 367788888899999999999987 2
Q ss_pred EEEEeccchhhhhcccCCCCCCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHH
Q 036840 215 LLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLA 294 (327)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~ 294 (327)
+++..++.. .+.+ ..++++.+.++. |++|+||+|+|+|++
T Consensus 198 ~l~~~~~~~-------------------------------------~~~~--~~~~~~~~~v~~-~~~GtGD~fsaal~a 237 (300)
T 3zs7_A 198 FLYSVKEGS-------------------------------------EAAV--RRFSGVVPYHEG-RYTGTGDVFAACLLA 237 (300)
T ss_dssp EEEEECCST-------------------------------------TSCC--EEEEEEEECCSS-CBTTHHHHHHHHHHH
T ss_pred EEEeccccc-------------------------------------cCCC--eEEEEEeccCCC-CCcCHHHHHHHHHHH
Confidence 333322000 0000 055666666655 899999999999999
Q ss_pred HHHcCCCchhhcccchHH--HHHHHHHH
Q 036840 295 SISSGLDVMQSVAVDDAK--TVYAAANV 320 (327)
Q Consensus 295 ~l~~g~~~~~al~~a~aa--~~~~~~~~ 320 (327)
+| +|+++++|+++|.+. .+++.+.+
T Consensus 238 ~l-~g~~~~~Av~~A~~~v~~~i~~t~~ 264 (300)
T 3zs7_A 238 FS-HSHPMDVAIGKSMAVLQELIIATRK 264 (300)
T ss_dssp HH-TTSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HH-cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99 999999999997776 77776643
No 59
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.65 E-value=4.4e-16 Score=143.42 Aligned_cols=161 Identities=16% Similarity=0.129 Sum_probs=114.3
Q ss_pred CCcEEEEecCCCHHH---HHHHHHHHHhCCCCEEEecCchhh-----------hhhhhcccccceEEeCCHHHHHHHHHh
Q 036840 101 SASVLMVDANLSPPA---LAASCKIAAECNIPVWFEPVSVTK-----------SRRITSVVKYITVVSPNEDELVAMANA 166 (327)
Q Consensus 101 ~~~~v~~~g~~~~~~---~~~l~~~a~~~~~~v~~d~~~~~~-----------~~~~~~~l~~~dvv~~n~~E~~~l~~~ 166 (327)
..|.+.+..-.+.+. +..+++.+++++++++|||..... .+.+.++++.+|++++|..|++.|++.
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~ 156 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDE 156 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCC
Confidence 577787742224344 444455454567899999975321 123567899999999999999999875
Q ss_pred hcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCC-------CceEEEEeccchhhhhcccCCCCCCCcc
Q 036840 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGS-------DGVLLCSKELLSSMRIGLRKTKPYGFSR 239 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
... +..+.++ ++++++.|.+.|++.|++|.|+ .|++++.++++
T Consensus 157 ~~~---------~~~~~~~----~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~----------------- 206 (291)
T 3mbh_A 157 PYK---------ADSTDEE----LKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGN----------------- 206 (291)
T ss_dssp CCC---------SCCCHHH----HHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTT-----------------
T ss_pred CCC---------CCCCHHH----HHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCC-----------------
Confidence 210 0012222 3677888888999999999664 46677654321
Q ss_pred cccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHH--HHHHH
Q 036840 240 DLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAK--TVYAA 317 (327)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa--~~~~~ 317 (327)
..++++.+++. +|++|+||+|.|+|+++|++|+++++|+++|++. .+++.
T Consensus 207 ---------------------------~~~~~~~~~~~-~dt~GaGD~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 207 ---------------------------RYWKVTCPYLP-AHYPGTGDTFTSVITGSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp ---------------------------EEEEEEESCCG-GGSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------eEEEEEecccC-CCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 04566666665 8999999999999999999999999999998876 56665
Q ss_pred HH
Q 036840 318 AN 319 (327)
Q Consensus 318 ~~ 319 (327)
+.
T Consensus 259 ~~ 260 (291)
T 3mbh_A 259 TF 260 (291)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.47 E-value=2.3e-13 Score=123.97 Aligned_cols=159 Identities=15% Similarity=0.177 Sum_probs=103.8
Q ss_pred hhhcCCcEEEEe-cCCCH---HHHHHHHHHHHhCCCCEEEecCchh----hhhhhhcccc--cceEEeCCHHHHHHHHHh
Q 036840 97 HHISSASVLMVD-ANLSP---PALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVK--YITVVSPNEDELVAMANA 166 (327)
Q Consensus 97 ~~l~~~~~v~~~-g~~~~---~~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~--~~dvv~~n~~E~~~l~~~ 166 (327)
+.+..++++++. |..++ +.+..+++.+++.++|+++||.... ..+...++++ .+|+|++|..|+..|++.
T Consensus 54 ~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~ 133 (272)
T 1ekq_A 54 DMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGV 133 (272)
T ss_dssp HHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC-
T ss_pred HHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCC
Confidence 345678988884 43333 4566677778889999999997531 1122345666 799999999999998764
Q ss_pred h-cCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccc
Q 036840 167 L-SGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245 (327)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
. ... +-.++. .+.++ ..++++.|.+++...|++| |..+ ++...+.
T Consensus 134 ~~~~~---~gvd~~-~~~~~----~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~------------------------ 179 (272)
T 1ekq_A 134 TDWLI---KGVDAG-EGGGD----IIRLAQQAAQKLNTVIAIT-GEVD-VIADTSH------------------------ 179 (272)
T ss_dssp ------------------HH----HHHHHHHHHHHHTSEEEEC-SSSE-EEECSSC------------------------
T ss_pred Ccccc---cCccCC-CCHHH----HHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCE------------------------
Confidence 2 100 000000 01122 2455666666544456666 8887 4443322
Q ss_pred cccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchH
Q 036840 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDA 311 (327)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~a 311 (327)
.++++..+..+.|++|+||+|.|.+.+.+.+|+++.+|+.+|+.
T Consensus 180 ----------------------~~~~~~~~~~~~~ttGaGD~lag~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 180 ----------------------VYTLHNGHKLLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp ----------------------EEEECCCCGGGGGSTTHHHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred ----------------------EEEEcCCCccccCccCchHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 66777766667799999999988888888889999999998875
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.38 E-value=2.2e-12 Score=128.63 Aligned_cols=158 Identities=15% Similarity=0.135 Sum_probs=111.9
Q ss_pred CCcEEEEecCCCHHHHHHHHHHHHh---CCCCEEEecCchhh----------hhhhh-cccccceEEeCCHHHHHHHHHh
Q 036840 101 SASVLMVDANLSPPALAASCKIAAE---CNIPVWFEPVSVTK----------SRRIT-SVVKYITVVSPNEDELVAMANA 166 (327)
Q Consensus 101 ~~~~v~~~g~~~~~~~~~l~~~a~~---~~~~v~~d~~~~~~----------~~~~~-~~l~~~dvv~~n~~E~~~l~~~ 166 (327)
+.|.+.+..- +.+.+..+.+..++ .+.++++||+.... .+.+. ++++.+|+|.||..|++.|++.
T Consensus 91 ~~daIkiG~l-s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g~ 169 (550)
T 3rm5_A 91 KCNVIKTGML-TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLGE 169 (550)
T ss_dssp CCSEEEECSC-CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHSC
T ss_pred CCCEEEECCC-CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhCC
Confidence 6888888554 77666666555544 47899999964310 12234 6889999999999999999874
Q ss_pred hcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCC-CEEEEEeCCCc--------e--EEEE-eccchhhhhcccCCCC
Q 036840 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGI-RLVVLTLGSDG--------V--LLCS-KELLSSMRIGLRKTKP 234 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~~-~~~~~~~~~~~~~~~~ 234 (327)
... ..+.++ +.++++.|.+.|. +.||||.|+.+ + +++. .+++
T Consensus 170 ~~~----------i~~~~d----~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~------------ 223 (550)
T 3rm5_A 170 ERK----------VNGLQD----IFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQK------------ 223 (550)
T ss_dssp CCC----------CCSSHH----HHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTE------------
T ss_pred CCC----------CCCHHH----HHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCe------------
Confidence 110 011222 3567788888776 89999998863 3 3443 2221
Q ss_pred CCCcccccccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchH--H
Q 036840 235 YGFSRDLYKTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDA--K 312 (327)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~a--a 312 (327)
.++++.+.++.+||+|+||+|.|++++.|++|+++++|+++|+. .
T Consensus 224 ---------------------------------~~~~~~~~v~~~~t~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~ 270 (550)
T 3rm5_A 224 ---------------------------------FIIFKGNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEYVQ 270 (550)
T ss_dssp ---------------------------------EEEEEEECCCCSCCBTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ---------------------------------EEEEEecCcCCCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 56677777777899999999999999999999999999999874 5
Q ss_pred HHHHHH
Q 036840 313 TVYAAA 318 (327)
Q Consensus 313 ~~~~~~ 318 (327)
++++.+
T Consensus 271 ~ai~~~ 276 (550)
T 3rm5_A 271 NAVAIG 276 (550)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 666654
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.02 E-value=2.1e-09 Score=97.33 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=101.2
Q ss_pred hhhcCCcEEEEecCC-CHH---HHHHHHHHHHhCCCCEEEecCchh----hhhhhhcccc-cceEEeCCHHHHHHHHHhh
Q 036840 97 HHISSASVLMVDANL-SPP---ALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVK-YITVVSPNEDELVAMANAL 167 (327)
Q Consensus 97 ~~l~~~~~v~~~g~~-~~~---~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~-~~dvv~~n~~E~~~l~~~~ 167 (327)
+.+..++++++...+ +.+ .+..+++.+++.++|+++||.... ..+...++++ .++++.||..|+..|++..
T Consensus 52 ~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L~g~~ 131 (265)
T 1v8a_A 52 EMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEE 131 (265)
T ss_dssp HHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHHhCCc
Confidence 456779999997543 333 344566778888999999997531 1122233443 2899999999999999864
Q ss_pred cCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccccc
Q 036840 168 SGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTS 247 (327)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (327)
... +|..+..+..+...++++.+.+++-..|++| |..+.+ +..+.
T Consensus 132 ~~~-------~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~i-~~~~~-------------------------- 176 (265)
T 1v8a_A 132 GKT-------RGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDYV-SDGRR-------------------------- 176 (265)
T ss_dssp C-----------------CHHHHHHHHHHHHHHTTSEEEEE-SSSEEE-ECSSC--------------------------
T ss_pred ccc-------cCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcEE-EcCCE--------------------------
Confidence 210 0000000000122456677766655567777 777654 33322
Q ss_pred cccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 248 RCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
.++++.......+++|+||+|.|.+.+.+.+|.+ .+|+..|.
T Consensus 177 --------------------~~~~~~g~~~~~~~~GtGD~Lsg~iaa~lA~g~~-~~Aa~~a~ 218 (265)
T 1v8a_A 177 --------------------TFAVYNGHELLGRVTGTGCMVAALTGAFVAVTEP-LKATTSAL 218 (265)
T ss_dssp --------------------EEEECCCCGGGGGSTTHHHHHHHHHHHHHTTSCH-HHHHHHHH
T ss_pred --------------------EEEEcCCCcCcCCccChhHHHHHHHHHHHhcCCC-HHHHHHHH
Confidence 5666665544569999999999999999999998 77766543
No 63
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.74 E-value=4.2e-08 Score=90.71 Aligned_cols=149 Identities=12% Similarity=0.059 Sum_probs=89.2
Q ss_pred hhhcCCcEEEEecCC--CHHHHHHHHHHHHh--CCCCEEEecCchhhhhhhhccc--ccceEEeCCHHHHHHHHHhhcCC
Q 036840 97 HHISSASVLMVDANL--SPPALAASCKIAAE--CNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDELVAMANALSGE 170 (327)
Q Consensus 97 ~~l~~~~~v~~~g~~--~~~~~~~l~~~a~~--~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E~~~l~~~~~~~ 170 (327)
..+.+++++.+...+ +.+....+.+..+. .++|+++|+........-.+++ +..++|.||..|++.|++....
T Consensus 107 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~~~l~~~~~~viTPN~~E~~~L~g~~~~- 185 (310)
T 2r3b_A 107 NVVEQADVILIGPGLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPIE- 185 (310)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTTCCCSSGGGEEEECCHHHHHHHHCCCGG-
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccchhhhcCCCCEEEcCCHHHHHHHhCCCCC-
Confidence 455678999987533 33333333344433 4889999996532211101223 4689999999999999874210
Q ss_pred CCccCcCCCccch-HHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccccccc
Q 036840 171 NMFRPIDRNKHSA-ESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRC 249 (327)
Q Consensus 171 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (327)
+. ++. ..++++.+ ++ +|+.-| .+.+++. ++
T Consensus 186 -----------~~~~~~---a~~aA~~l---g~--~VvlKG-~~~vi~~-~~---------------------------- 216 (310)
T 2r3b_A 186 -----------QQTLAN---NQRQQAKL---GS--TIVLKS-HRTTIFH-AG---------------------------- 216 (310)
T ss_dssp -----------GCCHHH---HHHHHHHH---TS--EEEECS-TTCEEEC-SS----------------------------
T ss_pred -----------cccchH---HHHHHHHh---Cc--EEEEeC-CceEEEE-CC----------------------------
Confidence 11 111 13344444 54 344444 4455554 32
Q ss_pred cCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHH-HcCCCchhhcccchHHHH
Q 036840 250 HSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI-SSGLDVMQSVAVDDAKTV 314 (327)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l-~~g~~~~~al~~a~aa~~ 314 (327)
..++.....+..+++|+||+| +|+++++ .+|+++.+|+.+|.....
T Consensus 217 ------------------~~~~~~~g~~~~~t~GtGD~L-ag~Iaa~lA~g~~~~eA~~~A~~~~~ 263 (310)
T 2r3b_A 217 ------------------EPFQNTGGNPGMATGGTGDTL-AGIIAGFLAQFKPTIETIAGAVYLHS 263 (310)
T ss_dssp ------------------SCEECCCCCGGGCSTTHHHHH-HHHHHHHHHHSCSSHHHHHHHHHHHH
T ss_pred ------------------EEEEECCCCCCCCCCChHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 233444455678999999997 5566665 689999999998754443
No 64
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.73 E-value=1e-07 Score=92.09 Aligned_cols=205 Identities=15% Similarity=0.082 Sum_probs=115.1
Q ss_pred ceecCCchHHHHHHHHHcCCC-ceEEEeecCCcchHHHHHHHHh------------------------cCCCccCeeecC
Q 036840 2 NYVLGGVARNVAECMSKLGSK-PYMISALGLDMAGNILLEHWKS------------------------AGLSTEGIRRQK 56 (327)
Q Consensus 2 ~~~~GG~~~N~a~~la~LG~~-v~~i~~vG~D~~g~~i~~~l~~------------------------~gV~~~~i~~~~ 56 (327)
+.++||++.-+|..||++|.+ |.+.+..+.... .+.|.. ...++.+|..
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~~----~~ll~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~E-- 186 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKRL----AELFKKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFE-- 186 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHHH----HTTSCTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEE--
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHHH----HHhcCCcceeecccCCceeecCchhhhccCCCCCcEEEEE--
Confidence 357999999999999999994 776766554322 233311 1122222221
Q ss_pred CCCceEEEE-----EecCCCCEEEEEecchhh-cccCCHHHHHHHHhhhcCCcEEEEecC--CC---------HHH---H
Q 036840 57 DIDTAVVSN-----ILDVNGELAAAVASVESI-EKFLTPDWIRQFIHHISSASVLMVDAN--LS---------PPA---L 116 (327)
Q Consensus 57 ~~~t~~~~~-----~~d~~g~~~~~~~~~~~~-~~~l~~~~i~~~~~~l~~~~~v~~~g~--~~---------~~~---~ 116 (327)
.+.+..+. +.-+...|.+...+.... .-.+.++..+.+.++-+.+|+++++|. +. .+. +
T Consensus 187 -y~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~ 265 (474)
T 3drw_A 187 -FRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRA 265 (474)
T ss_dssp -ECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHH
T ss_pred -cCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHH
Confidence 22333332 223444444444443332 223344444444455557999999982 11 122 2
Q ss_pred HHHHHHHHhCCCCEEEecCchhhh----hhhhcccccceEEeCCHHHHHHHHHhhcCCCCccCcCCCccchHHHHhcHHH
Q 036840 117 AASCKIAAECNIPVWFEPVSVTKS----RRITSVVKYITVVSPNEDELVAMANALSGENMFRPIDRNKHSAESLFQTLKP 192 (327)
Q Consensus 117 ~~l~~~a~~~~~~v~~d~~~~~~~----~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (327)
.+.++..+..+++|-|+..+.... ..+..+++++|.+.+|++|+..+.+.+......... -.....+++ -+
T Consensus 266 ~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~-~~~~~i~~v----~e 340 (474)
T 3drw_A 266 KEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRI-FTYNRLEDS----IL 340 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHH-HHHCCHHHH----HH
T ss_pred HHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhh-hcCCCHHHH----HH
Confidence 244445568899999998764322 345678999999999999999999986542100000 000112232 33
Q ss_pred HHHHHHH-cCCCEEEEEeCCCceEEEE
Q 036840 193 AILVLLE-KGIRLVVLTLGSDGVLLCS 218 (327)
Q Consensus 193 ~~~~l~~-~g~~~vvvt~G~~G~~~~~ 218 (327)
++.++++ .+++.|.|..-..-+++..
T Consensus 341 ~~~~ll~~~~l~rIhvHT~~y~l~~~~ 367 (474)
T 3drw_A 341 GGMIILDELNFEILQVHTTYYLMYITH 367 (474)
T ss_dssp HHHHHHHHHCCSEEEEECSSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEechheEEEEe
Confidence 3444444 5898888876555555544
No 65
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.67 E-value=1.9e-07 Score=91.73 Aligned_cols=162 Identities=11% Similarity=0.122 Sum_probs=100.4
Q ss_pred CCHHHHHHHHhhhcCCcEEEEecCCC--HHHHHHHHHHHHhCCCCEEEecCchhhhh-hhhcccccceEEeCCHHHHHHH
Q 036840 87 LTPDWIRQFIHHISSASVLMVDANLS--PPALAASCKIAAECNIPVWFEPVSVTKSR-RITSVVKYITVVSPNEDELVAM 163 (327)
Q Consensus 87 l~~~~i~~~~~~l~~~~~v~~~g~~~--~~~~~~l~~~a~~~~~~v~~d~~~~~~~~-~~~~~l~~~dvv~~n~~E~~~l 163 (327)
++++.++.+.+.+.+++++.+...+. ......+.+.+++.++|+++|+....... .+.+.++..+++.||..|+..|
T Consensus 306 ~~~~~~~~~~~~~~~~davviGpGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~~~ll~~~~~~~vlTPN~~E~~~L 385 (502)
T 3rss_A 306 FSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARL 385 (502)
T ss_dssp CCGGGHHHHHHHHTTCSEEEECTTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCCHHHHHHCSSCEEECCCHHHHHHH
T ss_pred cchhhHHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhcHHHHhccCCCEEEeCCHHHHHHH
Confidence 44445555556778999999986442 23333344456777999999997533211 1111224578999999999999
Q ss_pred HHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHc-CCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCccccc
Q 036840 164 ANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLY 242 (327)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (327)
++.. ..+..+. .++++.+.++ +. +|+.-|.. .++++.+.
T Consensus 386 ~g~~---------------~~~~~~d-~~aa~~la~~~~~--~VvlKG~~-~vi~~~~~--------------------- 425 (502)
T 3rss_A 386 VKKT---------------VGDVKYN-YELAEEFAKENDC--VLVLKSAT-TIVTDGEK--------------------- 425 (502)
T ss_dssp HTCC---------------HHHHTTC-HHHHHHHHHHHTS--EEEECSSS-EEEECSSC---------------------
T ss_pred hCCC---------------ccchHHH-HHHHHHHHHHcCC--EEEEeCCC-eEEEcCCE---------------------
Confidence 8742 1111122 3445555543 43 45555544 34444331
Q ss_pred ccccccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchHHHH
Q 036840 243 KTVTSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDAKTV 314 (327)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~aa~~ 314 (327)
.+..+ .....++++|+||+|.|.+.+.+.+|+++.+|+.+|...-.
T Consensus 426 -------------------------~~~~~-~g~~~~at~GsGD~Lag~iaa~lA~g~~~~~Aa~~A~~~hg 471 (502)
T 3rss_A 426 -------------------------TLFNI-TGNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHG 471 (502)
T ss_dssp -------------------------EEEEC-CCCGGGSSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------------------------EEEEC-CCCCccccCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 33333 34456789999998877777777899999999888754433
No 66
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.65 E-value=3.5e-07 Score=88.36 Aligned_cols=207 Identities=15% Similarity=0.148 Sum_probs=113.2
Q ss_pred ecCCchHHHHHHHHHcCCCceE--EEeecCCcchHHHHHHHHhcCCCcc----Ce-ee------cCCCCceEEEEEecCC
Q 036840 4 VLGGVARNVAECMSKLGSKPYM--ISALGLDMAGNILLEHWKSAGLSTE----GI-RR------QKDIDTAVVSNILDVN 70 (327)
Q Consensus 4 ~~GG~~~N~a~~la~LG~~v~~--i~~vG~D~~g~~i~~~l~~~gV~~~----~i-~~------~~~~~t~~~~~~~d~~ 70 (327)
+.||++..+|..|+.+|.++.+ ++.+|.. +.+.|...+|..- .- .. ........-+++--+.
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~-----~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~Ef~~ 183 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL-----QANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYEFPR 183 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH-----HHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEEECT
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH-----HHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEEcCC
Confidence 7899999999999999999987 6776653 3344432222220 00 00 0011222233332223
Q ss_pred CC-----------EEEEEecchhhcccCCHHHHHHHHhhhcCCcEEEEecC--CC----HHHHH----HHHHHHHhCCCC
Q 036840 71 GE-----------LAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN--LS----PPALA----ASCKIAAECNIP 129 (327)
Q Consensus 71 g~-----------~~~~~~~~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~--~~----~~~~~----~l~~~a~~~~~~ 129 (327)
|. |.+...+.....-.+.++..+.+.++..++|+++++|. +. .+... .+. ....++++
T Consensus 184 G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~-~L~~~~~~ 262 (455)
T 1ua4_A 184 GFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLE-VLNEREIP 262 (455)
T ss_dssp TCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHH-HHHHTTCC
T ss_pred CCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHH-HhcCCCce
Confidence 33 33333333222222344444444555567999999982 21 12222 223 23668899
Q ss_pred EEEecCchhh----hhhhhcccccceEEeCCHHHHHHHHHhhcCCCC-ccCcCCCccchHHHHhcHHHHHHHHHH-cCCC
Q 036840 130 VWFEPVSVTK----SRRITSVVKYITVVSPNEDELVAMANALSGENM-FRPIDRNKHSAESLFQTLKPAILVLLE-KGIR 203 (327)
Q Consensus 130 v~~d~~~~~~----~~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~ 203 (327)
|-|+..+... ...+ .+++++|.+.+|++|+..+.+.+.+... .+....+..++.++. +++.++++ .++.
T Consensus 263 iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~l~ 337 (455)
T 1ua4_A 263 VHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVT----EAMLKLAKKTGVK 337 (455)
T ss_dssp EEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHH----HHHHHHHHHHCCS
T ss_pred EEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHH----HHHHHHHHHcCCC
Confidence 9999876432 2334 8999999999999999999988654210 011111112344443 33344443 5888
Q ss_pred EEEEEeCCCceEEEEecc
Q 036840 204 LVVLTLGSDGVLLCSKEL 221 (327)
Q Consensus 204 ~vvvt~G~~G~~~~~~~~ 221 (327)
.|.+..-..-+++..++.
T Consensus 338 rihvHTl~y~l~~t~~~~ 355 (455)
T 1ua4_A 338 RIHFHTYGYYLALTEYKG 355 (455)
T ss_dssp EEEEECSSEEEEEESSCC
T ss_pred EEEEeCchheeEEEeCCH
Confidence 887776555444444333
No 67
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.65 E-value=1.2e-08 Score=94.35 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=90.0
Q ss_pred hhhcCCcEEEEecCC--CHHHHHHHHHHHHh--CCCCEEEecCchhhhhhhhcc-c-ccceEEeCCHHHHHHHHHhhcCC
Q 036840 97 HHISSASVLMVDANL--SPPALAASCKIAAE--CNIPVWFEPVSVTKSRRITSV-V-KYITVVSPNEDELVAMANALSGE 170 (327)
Q Consensus 97 ~~l~~~~~v~~~g~~--~~~~~~~l~~~a~~--~~~~v~~d~~~~~~~~~~~~~-l-~~~dvv~~n~~E~~~l~~~~~~~ 170 (327)
+.+.+.+++.+...+ +.+....+.+..+. .++|+++|+........-.++ + +..++|+||..|++.|++....
T Consensus 121 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~~- 199 (311)
T 3bgk_A 121 EQITAADVVLMGPGLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTIP- 199 (311)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHCC-CCCSCSCEEEECCSCC-CTTTCCCST-
T ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccChhhcCCCCCEEECCcHHHHHHHhCCCCC-
Confidence 455678999997533 33333334434443 378999999653221110122 3 4689999999999988764210
Q ss_pred CCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCccccccccccccc
Q 036840 171 NMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCH 250 (327)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (327)
...++. ..++++.+.+ + .+|+.-| .+.+++. ++
T Consensus 200 ----------~~~~d~---~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~----------------------------- 232 (311)
T 3bgk_A 200 ----------EQIEAA---TQTALAHFPK-E--TILVAKS-HQTKIYQ-GQ----------------------------- 232 (311)
T ss_dssp ----------TCCHHH---HHHHHTTSCT-T--CEEEECS-SSCEEEE-TT-----------------------------
T ss_pred ----------cchhhH---HHHHHHHHhc-C--CEEEEeC-CCeEEEE-CC-----------------------------
Confidence 000111 0233444544 4 2444444 5556665 33
Q ss_pred CCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHH-Hc-CCCchhhcccchHHHHH
Q 036840 251 SSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASI-SS-GLDVMQSVAVDDAKTVY 315 (327)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l-~~-g~~~~~al~~a~aa~~~ 315 (327)
..++.....+..+++|+||+| +|+++++ .+ |+++.+|+.+|......
T Consensus 233 -----------------~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g~~~~eA~~~A~~~~~~ 281 (311)
T 3bgk_A 233 -----------------KIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFHTDRFEVAAAAVFLHSY 281 (311)
T ss_dssp -----------------EEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCCSCHHHHHHHHHHHHHH
T ss_pred -----------------EEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 344445556778999999997 6666665 58 99999999988544433
No 68
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.65 E-value=5.3e-07 Score=86.99 Aligned_cols=205 Identities=13% Similarity=0.159 Sum_probs=115.7
Q ss_pred ecCCchHHHHHHHHHcCCCceE--EEeecCCcchHHHHHHHHhcCCC------------------------ccCeeecCC
Q 036840 4 VLGGVARNVAECMSKLGSKPYM--ISALGLDMAGNILLEHWKSAGLS------------------------TEGIRRQKD 57 (327)
Q Consensus 4 ~~GG~~~N~a~~la~LG~~v~~--i~~vG~D~~g~~i~~~l~~~gV~------------------------~~~i~~~~~ 57 (327)
+.||++.-+|..|+.+|.++.+ ++.+|. ...+.|...+|. +++|..
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~E--- 183 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLDGPIYVPTFERGELRLIHPREFRKGEEDCIHYIYE--- 183 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCSSSEEEEC------CEECGGGC----CCCEEECCE---
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCCCCeEeeeccCCceeccCchhhccCCCCcceEEEE---
Confidence 7899999999999999999876 555543 344444312221 111111
Q ss_pred CCceEEE-EEecCCCCEEEEEecchhhcccCCHHHHHHHHhhhcCCcEEEEecC--CCH----H----HHHHHHHHHHhC
Q 036840 58 IDTAVVS-NILDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN--LSP----P----ALAASCKIAAEC 126 (327)
Q Consensus 58 ~~t~~~~-~~~d~~g~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~--~~~----~----~~~~l~~~a~~~ 126 (327)
.+.+..+ -+.-+...|.+..++.....-.+.++..+.+.++..+.|+++++|. +.. + ....+. ..+.+
T Consensus 184 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~-~L~~~ 262 (457)
T 1l2l_A 184 FPRNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLK-ILNDL 262 (457)
T ss_dssp ECTTCEETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHH-HHHHT
T ss_pred cCCCCeecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHH-HhcCC
Confidence 1111111 1222434444444444333334556655556666678999999983 221 1 222333 33678
Q ss_pred CCCEEEecCchhh----hhhhhcccccceEEeCCHHHHHHHHHhhcCCCCc-cCcCCCccchHHHHhcHHHHHHHHH-Hc
Q 036840 127 NIPVWFEPVSVTK----SRRITSVVKYITVVSPNEDELVAMANALSGENMF-RPIDRNKHSAESLFQTLKPAILVLL-EK 200 (327)
Q Consensus 127 ~~~v~~d~~~~~~----~~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 200 (327)
+++|-|+..+... ...+ .+++++|.+.+|++|+..+...+.++... +.+..+..+..++. +++.+++ +.
T Consensus 263 ~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~----~~~~~ll~~~ 337 (457)
T 1l2l_A 263 GIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVI----EGLLKLIKET 337 (457)
T ss_dssp TCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHH----HHHHHHHHHH
T ss_pred CCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHH----HHHHHHHHhc
Confidence 9999999876432 2345 89999999999999999988776532210 00011112233332 3333444 45
Q ss_pred CCCEEEEEeCCCceEEEEeccc
Q 036840 201 GIRLVVLTLGSDGVLLCSKELL 222 (327)
Q Consensus 201 g~~~vvvt~G~~G~~~~~~~~~ 222 (327)
++..+.+..-..-+++...+++
T Consensus 338 ~l~rIhvHTl~y~l~~~~~~~~ 359 (457)
T 1l2l_A 338 GVKRIHFHTYGYYLALTREKGE 359 (457)
T ss_dssp CCSEEEEEETTEEEEEESSCST
T ss_pred CCCeEEEEecceeeeeEecCHH
Confidence 8888877766555555444443
No 69
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.58 E-value=4.9e-07 Score=82.21 Aligned_cols=147 Identities=14% Similarity=0.175 Sum_probs=92.6
Q ss_pred hhcCCcEEEEecCCC-HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHHHHHhhcCCCCccCc
Q 036840 98 HISSASVLMVDANLS-PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176 (327)
Q Consensus 98 ~l~~~~~v~~~g~~~-~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~ 176 (327)
.+.++|++.+.+.+. .+....+++.+.+.+.|+++|...... +.+ ......+++.||..|++.|++..
T Consensus 95 ~l~~~davviGPGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~-~~l-~~~~~~~vlTPN~~E~~~L~g~~--------- 163 (279)
T 3rpz_A 95 LEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAK-RTY-PKREGPVILTPHPGEFFRMTGVP--------- 163 (279)
T ss_dssp CSSCCSEEEECTTCCCCHHHHHHHHHHTTSSSCEEECGGGCCS-CCC-CCCSSCEEECCCHHHHHHHHCCC---------
T ss_pred hccCCCEEEECCCCCCCHHHHHHHHHHHhhCCCEEEECCccch-hhh-hhccCCEEEecCHHHHHHHhCCC---------
Confidence 457899999976543 244566677777778899999875332 111 11245789999999999998742
Q ss_pred CCCccchHHHHhcHHHHHHHHHHc-CCCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccccccccCCCcc
Q 036840 177 DRNKHSAESLFQTLKPAILVLLEK-GIRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255 (327)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
..+..+...++++.+.++ ++ .|+++ |. +.+++..++
T Consensus 164 ------~~~~~~d~~~aa~~la~~~~~-~VvlK-G~-~~vi~~~~g---------------------------------- 200 (279)
T 3rpz_A 164 ------VNELQKKRAEYAKEWAAQLQT-VIVLK-GN-QTVIAFPDG---------------------------------- 200 (279)
T ss_dssp ------HHHHTTSHHHHHHHHHHHHTS-EEEEC-ST-TCEEECTTS----------------------------------
T ss_pred ------ccchHHHHHHHHHHHHHHcCe-EEEEe-CC-CcEEECCCc----------------------------------
Confidence 111112234455666554 43 44444 43 335554433
Q ss_pred CCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccch
Q 036840 256 GAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDD 310 (327)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~ 310 (327)
..++.........+.|+||++.+.+...+.+|+++.+|+..|.
T Consensus 201 ------------~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~~~~A~~~a~ 243 (279)
T 3rpz_A 201 ------------DCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAV 243 (279)
T ss_dssp ------------CEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSSHHHHHHHHH
T ss_pred ------------eEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 2344444445678999999875555555679999999988864
No 70
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=98.57 E-value=6.3e-07 Score=86.58 Aligned_cols=205 Identities=15% Similarity=0.142 Sum_probs=112.7
Q ss_pred ecCCchHHHHHHHHHcCCCceE--EEeecCCcchHHHHHHHHhcCCCcc-----Ceeec------CCCCceEEEEE----
Q 036840 4 VLGGVARNVAECMSKLGSKPYM--ISALGLDMAGNILLEHWKSAGLSTE-----GIRRQ------KDIDTAVVSNI---- 66 (327)
Q Consensus 4 ~~GG~~~N~a~~la~LG~~v~~--i~~vG~D~~g~~i~~~l~~~gV~~~-----~i~~~------~~~~t~~~~~~---- 66 (327)
+.||++.-+|..|+.+|.++.+ ++.+|. ...+.|...+|..- .+... .+.+.-.-+++
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~~ 191 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPR 191 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEECS
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEEcCC
Confidence 7899999999999999999876 555544 34444432222110 00000 00111111111
Q ss_pred -------ecCCCCEEEEEecchhhcccCCHHHHHHHHhhhcCCcEEEEecC--C-----C----HHHHHHH---HHHHHh
Q 036840 67 -------LDVNGELAAAVASVESIEKFLTPDWIRQFIHHISSASVLMVDAN--L-----S----PPALAAS---CKIAAE 125 (327)
Q Consensus 67 -------~d~~g~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~~~~v~~~g~--~-----~----~~~~~~l---~~~a~~ 125 (327)
.-+...|.+..++.....-.+.++..+.+.++..+.|+++++|. + + .+-+..+ ++....
T Consensus 192 G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~ 271 (467)
T 1gc5_A 192 GFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNR 271 (467)
T ss_dssp SCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH
T ss_pred CCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcC
Confidence 12333344444443333333456655556666678999999982 1 1 1222222 222256
Q ss_pred CCCCEEEecCchhh----hhhhhcccccceEEeCCHHHHHHHHHhhcCCCCccC-cCCCccchHHHHhcHHHHHHHHH-H
Q 036840 126 CNIPVWFEPVSVTK----SRRITSVVKYITVVSPNEDELVAMANALSGENMFRP-IDRNKHSAESLFQTLKPAILVLL-E 199 (327)
Q Consensus 126 ~~~~v~~d~~~~~~----~~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~ 199 (327)
++++|-|+..+... ...+ .+++++|.+.+|++|+..+...+.++..... .. .+..++ -+++.+++ +
T Consensus 272 ~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~---p~v~~v----~~~~~~ll~~ 343 (467)
T 1gc5_A 272 YNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLE---GHIFSV----IDAMNVLMDE 343 (467)
T ss_dssp TTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHT---TCHHHH----HHHHHHHHHH
T ss_pred CCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCCcccccccC---CCHHHH----HHHHHHHHHh
Confidence 88999999876432 2345 8999999999999999998887654310000 00 002222 23333443 4
Q ss_pred cCCCEEEEEeCCCceEEEEecc
Q 036840 200 KGIRLVVLTLGSDGVLLCSKEL 221 (327)
Q Consensus 200 ~g~~~vvvt~G~~G~~~~~~~~ 221 (327)
.++..+.+..-..-+++...+.
T Consensus 344 ~~l~rIhvHTl~y~l~~~~~~~ 365 (467)
T 1gc5_A 344 TGIERIHFHTYGYYLALTQYRG 365 (467)
T ss_dssp HCCSEEEEEETTEEEEEESSCC
T ss_pred cCCCeEEEEecceeeeeEeCCH
Confidence 5888888776655555544433
No 71
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.46 E-value=2.3e-06 Score=77.44 Aligned_cols=164 Identities=20% Similarity=0.176 Sum_probs=100.2
Q ss_pred hhhcCCcEEEEec-CCCHH---HHHHHHHHHHhCCCCEEEecCchh----hhhhhhccc-ccceEEeCCHHHHHHHHHhh
Q 036840 97 HHISSASVLMVDA-NLSPP---ALAASCKIAAECNIPVWFEPVSVT----KSRRITSVV-KYITVVSPNEDELVAMANAL 167 (327)
Q Consensus 97 ~~l~~~~~v~~~g-~~~~~---~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l-~~~dvv~~n~~E~~~l~~~~ 167 (327)
+.++.++.+++.. .++.+ ....+++.+++.++|+++||.... ..+...+++ ..+++|.+|..|+..|++..
T Consensus 54 e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~L~g~~ 133 (273)
T 3dzv_A 54 QMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTFCQLV 133 (273)
T ss_dssp HHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHHHTTCC
T ss_pred HHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHHHhCCc
Confidence 5667899999874 34443 455556678889999999997532 112222333 25899999999999998752
Q ss_pred cCCCCccCcCCCc-cchHHHHhcHHHHHHHHHHcCC-CEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccc
Q 036840 168 SGENMFRPIDRNK-HSAESLFQTLKPAILVLLEKGI-RLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTV 245 (327)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (327)
.... -.++.. .+.++.+....++++.+.++.- ..|++|-+.+ +++..+.
T Consensus 134 ~~~~---GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~D--~i~dg~~------------------------ 184 (273)
T 3dzv_A 134 SHGR---GVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQD--VLVSQEQ------------------------ 184 (273)
T ss_dssp CC----------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSSE--EEECSSC------------------------
T ss_pred cccc---ccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCee--EEEcCCE------------------------
Confidence 2100 001000 0001100022455667766544 6788886443 3433221
Q ss_pred cccccCCCccCCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccchH
Q 036840 246 TSRCHSSRYSGAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVDDA 311 (327)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a~a 311 (327)
.+.++.-....-.++|.||++.|.+.+.+.+|.++.+|+..|..
T Consensus 185 ----------------------~~~~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~ 228 (273)
T 3dzv_A 185 ----------------------VIVLQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVS 228 (273)
T ss_dssp ----------------------EEEECCCCGGGGSSTTHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred ----------------------EEEeCCCCcccCCcCCchHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45555543334557999999999999999999999998877543
No 72
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=97.77 E-value=0.00035 Score=62.71 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=48.6
Q ss_pred hhcCCcEEEEec-CCCHHH---HHHHHHHHHhCCCCEEEecCchh----hhhhhhcccc-cceEEeCCHHHHHHHHHhhc
Q 036840 98 HISSASVLMVDA-NLSPPA---LAASCKIAAECNIPVWFEPVSVT----KSRRITSVVK-YITVVSPNEDELVAMANALS 168 (327)
Q Consensus 98 ~l~~~~~v~~~g-~~~~~~---~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~-~~dvv~~n~~E~~~l~~~~~ 168 (327)
..+.++.+++.. .++.+. .....+.+++.++|+++||.... ..+...+++. ..++|.+|..|+..|.+...
T Consensus 53 ~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~~~ 132 (265)
T 3hpd_A 53 MIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEG 132 (265)
T ss_dssp HHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHHHC
T ss_pred HHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcccC
Confidence 445578888864 455543 33445678889999999997532 2233344433 58999999999999998643
No 73
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.64 E-value=0.00072 Score=66.78 Aligned_cols=72 Identities=15% Similarity=0.322 Sum_probs=53.2
Q ss_pred HHhhhcC-CcEEEEecC-C-CHHHHHHHHHHHHhCCCCEEEecCchh----hhhhhhcccc--cceEEeCCHHHHHHHHH
Q 036840 95 FIHHISS-ASVLMVDAN-L-SPPALAASCKIAAECNIPVWFEPVSVT----KSRRITSVVK--YITVVSPNEDELVAMAN 165 (327)
Q Consensus 95 ~~~~l~~-~~~v~~~g~-~-~~~~~~~l~~~a~~~~~~v~~d~~~~~----~~~~~~~~l~--~~dvv~~n~~E~~~l~~ 165 (327)
+.+..+. ++.+++... + +.+....+.+.+++.++|+++||.... ..+...++++ ..++|.+|..|+..|++
T Consensus 299 ~~e~~~~~~~alvin~G~l~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g 378 (540)
T 3nl6_A 299 VNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAE 378 (540)
T ss_dssp HHHHTTSTTCEEEEESSCSCCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTT
T ss_pred HHHHHhccCCeEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhC
Confidence 3456777 899998743 2 256677777888899999999997532 2233455666 68999999999999987
Q ss_pred h
Q 036840 166 A 166 (327)
Q Consensus 166 ~ 166 (327)
.
T Consensus 379 ~ 379 (540)
T 3nl6_A 379 L 379 (540)
T ss_dssp C
T ss_pred C
Confidence 4
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=96.99 E-value=0.0019 Score=62.76 Aligned_cols=146 Identities=15% Similarity=0.163 Sum_probs=83.1
Q ss_pred hcCCcEEEEecCCC--HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHHHHHhhcCCCCccCc
Q 036840 99 ISSASVLMVDANLS--PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAMANALSGENMFRPI 176 (327)
Q Consensus 99 l~~~~~v~~~g~~~--~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~l~~~~~~~~~~~~~ 176 (327)
..+++++.+.+.+. +..+..++ +. . |+++|...... ..+.+.++...|+.||..|++.|++..... .
T Consensus 290 ~~~~~a~~iGPGlG~~~~~l~~~l---~~-~-p~VlDADaL~~-~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~-----v 358 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPKDFNRWL---EL-A-PCVLDAGVFYH-KEILQALEKEAVLTPHPKEFLSLLNLVGIN-----I 358 (475)
T ss_dssp CSSCSEEEECTTCSSCCTTHHHHH---HH-S-CEEEEGGGGGS-GGGGTTTTSSEEEECCHHHHHHHHHHTSCC-----C
T ss_pred ccCCCEEEEcCCCCCCHHHHHHHH---hc-C-CEEEECcccCC-chhhhccCCCEEECCCHHHHHHHhCCccCC-----C
Confidence 36788888865331 11133333 33 4 99999875432 123344456689999999999999863210 0
Q ss_pred CCCccchHHHHhcHHHHHHHHHHcC-CCEEEEEeCCCceEEEEeccchhhhhcccCCCCCCCcccccccccccccCCCcc
Q 036840 177 DRNKHSAESLFQTLKPAILVLLEKG-IRLVVLTLGSDGVLLCSKELLSSMRIGLRKTKPYGFSRDLYKTVTSRCHSSRYS 255 (327)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
+. .+..+...++++.+.+.. -..|++|-+ .- +++. +++
T Consensus 359 ~~-----~~~~~d~~~aa~~la~~~g~~~VvlKG~-~~-vI~~-~~~--------------------------------- 397 (475)
T 3k5w_A 359 SM-----LELLDNKLEIARDFSQKYPKVVLLLKGA-NT-LIAH-QGQ--------------------------------- 397 (475)
T ss_dssp CT-----TSGGGSCC--CHHHHHHCTTEEEEECSS-SE-EEEE-TTE---------------------------------
T ss_pred Cc-----chhHHHHHHHHHHHHHHcCCeEEEEeCC-CC-EEEC-CCE---------------------------------
Confidence 00 000011123345555543 445666543 32 3333 221
Q ss_pred CCCCCCCCCcceeEeecCCCCcccccCCCchhHHHHHHHHHHcCCCchhhcccc
Q 036840 256 GAMEPAGGSQFFAVHFPALPASVVRLTGAGDCLVGGTLASISSGLDVMQSVAVD 309 (327)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaF~ag~l~~l~~g~~~~~al~~a 309 (327)
.+..+ ....-..+.|.||.+.+.+.+-+.+|+++.+|+..|
T Consensus 398 ------------~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~~~~~Aa~~a 438 (475)
T 3k5w_A 398 ------------VFINI-LGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINA 438 (475)
T ss_dssp ------------EEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ------------EEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 22222 223345789999999999888899999998877654
No 75
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=55.39 E-value=44 Score=30.18 Aligned_cols=74 Identities=9% Similarity=0.189 Sum_probs=49.9
Q ss_pred cccCC-HHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHH
Q 036840 84 EKFLT-PDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNED 158 (327)
Q Consensus 84 ~~~l~-~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~ 158 (327)
+..++ .++--.+.+.+...++.+++..++++....+.+.+++.++||..|=+-. ....+.+++..+|++.+.-.
T Consensus 181 N~~~t~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~~~a~d~i~~k~~ 255 (338)
T 3ijl_A 181 NQGWKDRQYALDMIHWLKEKGIVMIEQPMPKEQLDDIAWVTQQSPLPVFADESLQ-RLGDVAALKGAFTGINIKLM 255 (338)
T ss_dssp TTCCCCHHHHHHHHHHHHHTTEEEEECCSCTTCHHHHHHHHHTCSSCEEESTTCC-SGGGTGGGBTTBSEEEECHH
T ss_pred cCCCCCHHHHHHHHHHHhhCCCCEEECCCCCCcHHHHHHHHhcCCCCEEECCCCC-CHHHHHHHHhhCCEEEeccc
Confidence 45563 6544445567778899999988776666777777788899999984322 12344555677898866443
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=55.24 E-value=50 Score=26.40 Aligned_cols=44 Identities=11% Similarity=0.127 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeC
Q 036840 112 SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSP 155 (327)
Q Consensus 112 ~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~ 155 (327)
.++.+..+++.+++.++.+.+..+.....+.+..+++..|.+.+
T Consensus 17 ~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~i 60 (182)
T 3can_A 17 HPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLLI 60 (182)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEEE
Confidence 44555678888888888888887764333344455555565433
No 77
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=52.68 E-value=80 Score=25.16 Aligned_cols=101 Identities=14% Similarity=0.008 Sum_probs=57.5
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecC-CCHHHHHHHHHHHHhCCCCEEEec-CchhhhhhhhcccccceEEeC-CHHHHHH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDAN-LSPPALAASCKIAAECNIPVWFEP-VSVTKSRRITSVVKYITVVSP-NEDELVA 162 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~-~~~~~~~~l~~~a~~~~~~v~~d~-~~~~~~~~~~~~l~~~dvv~~-n~~E~~~ 162 (327)
.++++.++...+.+.+++-+++-|. .+......+.....+.|.++.+-. ........ ...+..-|+++. +..
T Consensus 23 ~l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~d~~i~iS~s---- 97 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTIT-LANLRPTDLMIGVSVW---- 97 (187)
T ss_dssp TCCHHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHH-HHTCCTTEEEEEECCS----
T ss_pred hCCHHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHH-HhcCCCCCEEEEEeCC----
Confidence 4677888877778888888887763 244445555556667788776654 22111111 122333444322 111
Q ss_pred HHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEeCCCc
Q 036840 163 MANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTLGSDG 213 (327)
Q Consensus 163 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 213 (327)
| .+ .+ +.++++.+.++|++.+.+|.-...
T Consensus 98 ----------------G-~t-~~----~~~~~~~ak~~g~~vi~IT~~~~s 126 (187)
T 3sho_A 98 ----------------R-YL-RD----TVAALAGAAERGVPTMALTDSSVS 126 (187)
T ss_dssp ----------------S-CC-HH----HHHHHHHHHHTTCCEEEEESCTTS
T ss_pred ----------------C-CC-HH----HHHHHHHHHHCCCCEEEEeCCCCC
Confidence 1 11 11 244567777889999999976544
No 78
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=51.29 E-value=15 Score=28.31 Aligned_cols=71 Identities=4% Similarity=0.010 Sum_probs=52.0
Q ss_pred HHHHHHHHhhh-cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCch--hhhhhhhcccccceEEeCCHHH
Q 036840 89 PDWIRQFIHHI-SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSV--TKSRRITSVVKYITVVSPNEDE 159 (327)
Q Consensus 89 ~~~i~~~~~~l-~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~--~~~~~~~~~l~~~dvv~~n~~E 159 (327)
..|...+.++. -.++++.++|.++.+.+..+.+..+.+++.++.|+... ..+..+.+.++.+...++...+
T Consensus 13 k~D~~~L~~~~~~~~~iI~t~Gsi~~~~l~~I~~~~~~r~VIi~TD~D~~GekIRk~i~~~lp~~~hafi~r~~ 86 (119)
T 2fcj_A 13 RSDKQKVAAVLNEPVVIVCTNGTISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAY 86 (119)
T ss_dssp HHHHHHHHHHBSSCCEEEECCSCCCHHHHHHHHHHTTTSEEEEECCSSHHHHHHHHHHHHHCTTSEEECCCTTT
T ss_pred hHHHHHHHHhcCCCCCEEEeCCccCHHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHHHCCCCcEEeccCCc
Confidence 34444555565 37888988888888888888888888889899998753 2345567788888888777765
No 79
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.95 E-value=1.1e+02 Score=26.79 Aligned_cols=97 Identities=11% Similarity=0.076 Sum_probs=57.9
Q ss_pred hcCCcEEEEec-CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc-cceEEeCCH----------HHHHHHHHh
Q 036840 99 ISSASVLMVDA-NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-YITVVSPNE----------DELVAMANA 166 (327)
Q Consensus 99 l~~~~~v~~~g-~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~-~~dvv~~n~----------~E~~~l~~~ 166 (327)
...+|.+++.. .++.+.+..+.+.+++.|..+.++.++... +...+. .+|+|..|- +....+...
T Consensus 140 ~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eE---l~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ 216 (272)
T 3tsm_A 140 SWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAE---MERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKM 216 (272)
T ss_dssp HTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHH---HHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHH
T ss_pred HcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHH---HHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHh
Confidence 45789988875 457778999999999999999999976432 222222 366766662 333444443
Q ss_pred hcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEE
Q 036840 167 LSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVL 207 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvv 207 (327)
... ...-.-++|..+++++ ..+.+.|+..|+|
T Consensus 217 ip~-~~~vIaesGI~t~edv--------~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 217 APS-DRLLVGESGIFTHEDC--------LRLEKSGIGTFLI 248 (272)
T ss_dssp SCT-TSEEEEESSCCSHHHH--------HHHHTTTCCEEEE
T ss_pred CCC-CCcEEEECCCCCHHHH--------HHHHHcCCCEEEE
Confidence 211 0111224566666554 4455566665555
No 80
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=45.33 E-value=91 Score=25.69 Aligned_cols=53 Identities=8% Similarity=0.057 Sum_probs=33.4
Q ss_pred cEEEEec-C--CCHHHHHHHHHHHHhCCCCEEEecCchh--hhhhhhcccccceEEeC
Q 036840 103 SVLMVDA-N--LSPPALAASCKIAAECNIPVWFEPVSVT--KSRRITSVVKYITVVSP 155 (327)
Q Consensus 103 ~~v~~~g-~--~~~~~~~~l~~~a~~~~~~v~~d~~~~~--~~~~~~~~l~~~dvv~~ 155 (327)
..+.+.| + +.++.+..+++.+++.++.+.+..+... ..+.+.++++.+|.+.+
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~i 128 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVML 128 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEE
T ss_pred CeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEE
Confidence 4555554 3 2455578899999998998888877633 33444555555565444
No 81
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=43.37 E-value=94 Score=28.61 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=50.1
Q ss_pred cccCCHHHHHHHHhhh--cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHI--SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l--~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+..++.++-..+.+.+ ...++.+++..++++....+.+++++.++||..|=+-. ....+.+++ ..+|++.+.-.-
T Consensus 196 N~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dEs~~-~~~~~~~~i~~~a~d~v~~k~~~ 274 (389)
T 3s5s_A 196 NGGLTAGEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRRAGVDVAADESAA-SAEDVLRVAAERAATVVNIKLMK 274 (389)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCS-SHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCCCCHHHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhhCCCCEEECCCCC-CHHHHHHHHHcCCCCEEEecCCC
Confidence 4456666655556677 77899999988776667777777788899999984421 223344444 358887765443
No 82
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=43.20 E-value=98 Score=30.45 Aligned_cols=106 Identities=10% Similarity=-0.001 Sum_probs=72.2
Q ss_pred CCHHHHHHHHhhhc-CCcEEEEecCCCHHHHHHHHHHHHhCC---CCEEEecCchhhhhhhhcccccceEEeCCHHHHHH
Q 036840 87 LTPDWIRQFIHHIS-SASVLMVDANLSPPALAASCKIAAECN---IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA 162 (327)
Q Consensus 87 l~~~~i~~~~~~l~-~~~~v~~~g~~~~~~~~~l~~~a~~~~---~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~ 162 (327)
+++.+...+...+. .+|++.++.--+.+.+..+.+.+++.+ +.++.-.+....-+.+.+++...|.+.+..-++..
T Consensus 171 ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgv 250 (587)
T 2e28_A 171 ITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGV 250 (587)
T ss_dssp CCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHH
T ss_pred CCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhh
Confidence 56666555444444 699999987667788888888776654 67888888766667888889889999998888654
Q ss_pred HHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEEe
Q 036840 163 MANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLTL 209 (327)
Q Consensus 163 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 209 (327)
=.+ .+++....++.++...+.|...++-|+
T Consensus 251 ei~-----------------~~~v~~~qk~ii~~~~~~gkpvi~ATQ 280 (587)
T 2e28_A 251 EIP-----------------AEEVPLIQKLLIKKSNMLGKPVITATQ 280 (587)
T ss_dssp HSC-----------------GGGHHHHHHHHHHHHHHHTCCEEEESS
T ss_pred hcC-----------------HHHHHHHHHHHHHHHHHcCCCeEEech
Confidence 222 123333335556666667777666663
No 83
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=42.93 E-value=23 Score=30.40 Aligned_cols=54 Identities=6% Similarity=-0.017 Sum_probs=41.9
Q ss_pred cCCcEEEEecCC-CHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEe
Q 036840 100 SSASVLMVDANL-SPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVS 154 (327)
Q Consensus 100 ~~~~~v~~~g~~-~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~ 154 (327)
..+|++.+..+. +. ....+++.+++.|+.+.+..++.+..+.+..+++.+|+|.
T Consensus 79 aGAd~itvh~Ea~~~-~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~Vl 133 (231)
T 3ctl_A 79 AGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKIT 133 (231)
T ss_dssp HTCSEEEECGGGCTT-THHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEE
T ss_pred cCCCEEEECcccCCc-cHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEE
Confidence 368999988765 43 4678889999999998888776555667788888888874
No 84
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=42.12 E-value=72 Score=28.92 Aligned_cols=75 Identities=12% Similarity=0.151 Sum_probs=48.8
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~~E 159 (327)
+..++.++--.+.+.+...++.+++..++++....+.+.+++.++||..|=+ ......+.++++ .+|++.+.-.-
T Consensus 191 n~~~~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 191 NQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADES-CFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp TTCSCHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTT-CCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCC-cCCHHHHHHHHHcCCCCEEEECchh
Confidence 3446666655566778889999998777655556666667778899999843 222334455553 57887775443
No 85
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=39.86 E-value=58 Score=29.82 Aligned_cols=92 Identities=12% Similarity=0.065 Sum_probs=53.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccccc-ceEEeCCHHHHHH--HHHhhcCCCCccCcCCCccchHHH
Q 036840 110 NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-ITVVSPNEDELVA--MANALSGENMFRPIDRNKHSAESL 186 (327)
Q Consensus 110 ~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~-~dvv~~n~~E~~~--l~~~~~~~~~~~~~~~~~~~~~~~ 186 (327)
.++.+....+.+.|++.|++++..+-... .+..+.++ +|++++.-.|++. |+.......-.=.+.+|..+.+++
T Consensus 87 ~l~~e~~~~L~~~~~~~Gi~~~st~~d~~---svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei 163 (349)
T 2wqp_A 87 ALNEEDEIKLKEYVESKGMIFISTLFSRA---AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESI 163 (349)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeeCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHH
Confidence 45678889999999999999888775432 22223333 5666655444322 122222111112346677777665
Q ss_pred HhcHHHHHHHHHHcCCCEEEEE
Q 036840 187 FQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 187 ~~~~~~~~~~l~~~g~~~vvvt 208 (327)
+.+++.+.+.|.+.+++.
T Consensus 164 ----~~Ave~i~~~G~~iiLlh 181 (349)
T 2wqp_A 164 ----KKSVEIIREAGVPYALLH 181 (349)
T ss_dssp ----HHHHHHHHHHTCCEEEEE
T ss_pred ----HHHHHHHHHcCCCEEEEe
Confidence 556677777777666553
No 86
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=38.16 E-value=93 Score=28.31 Aligned_cols=73 Identities=10% Similarity=0.110 Sum_probs=48.2
Q ss_pred cccCCHHHHHHHHhhh--cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 84 EKFLTPDWIRQFIHHI--SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l--~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
+..++.++-..+.+.+ ...++.+++..++++....+.+++++.++||..|=+- .....+.+++ ..+|++.+.-
T Consensus 195 N~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~ 271 (365)
T 3ik4_A 195 NCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSGFAVAADESA-RSAHDVLRIAREGTASVINIKL 271 (365)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTC-SSHHHHHHHHHHTCCSEEEECH
T ss_pred CCCCCHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCCCCEEECCCC-CCHHHHHHHHHhCCCCEEEEcC
Confidence 4456666655556677 7889999988776655667777777889999998442 2223344444 3578876644
No 87
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=36.87 E-value=45 Score=23.45 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=30.5
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecC
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPV 135 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~ 135 (327)
.++.++++..+.+++....+..+|++.++|+.+-.+
T Consensus 26 gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 26 GSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp TCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 358889999998888888999999999999877653
No 88
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=36.85 E-value=94 Score=28.53 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=48.8
Q ss_pred cccCCHHHHHHHHhhhcC--CcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISS--ASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~--~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~~E 159 (327)
+..++.++-..+.+.+.. .++.+++..++++....+.+.+++.++||..|=+- .....+.++++ .+|++.+.-.-
T Consensus 194 N~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 194 NQGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFSNIPVVADESV-FDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp TTCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHCSSCEEESTTC-SSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcCCCCEEeCCcc-CCHHHHHHHHHcCCCCEEEECccc
Confidence 445666665556667777 78899987776655666677777788999998432 22233444443 57887765443
No 89
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=35.22 E-value=36 Score=29.07 Aligned_cols=54 Identities=13% Similarity=0.004 Sum_probs=40.1
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEe
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVS 154 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~ 154 (327)
..+|++.+..+... .....++.+++.|+.+.+..++.+..+.+..+++.+|+|.
T Consensus 86 aGad~itvH~Ea~~-~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl 139 (228)
T 3ovp_A 86 AGANQYTFHLEATE-NPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMAL 139 (228)
T ss_dssp HTCSEEEEEGGGCS-CHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEE
T ss_pred cCCCEEEEccCCch-hHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEE
Confidence 47899999876443 3567778888999988888776555567777888888764
No 90
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=35.17 E-value=1.3e+02 Score=28.62 Aligned_cols=106 Identities=11% Similarity=0.048 Sum_probs=69.5
Q ss_pred cCCHHHHHHHH--hhhc-CCcEEEEecCCCHHHHHHHHHHHHhCC--CCEEEecCchhhhhhhhcccccceEEeCCHHHH
Q 036840 86 FLTPDWIRQFI--HHIS-SASVLMVDANLSPPALAASCKIAAECN--IPVWFEPVSVTKSRRITSVVKYITVVSPNEDEL 160 (327)
Q Consensus 86 ~l~~~~i~~~~--~~l~-~~~~v~~~g~~~~~~~~~l~~~a~~~~--~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~ 160 (327)
.+++.|...+. -.++ ..|++.++.--+.+.+..+.+...+.+ +.++.-.++...-+.+.+++..+|-+.+..-++
T Consensus 178 ~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDL 257 (461)
T 3qtg_A 178 TPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDL 257 (461)
T ss_dssp SSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEccccc
Confidence 36777776554 3343 589999987667788888888777654 567777777666677888888899998887775
Q ss_pred HHHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 161 VAMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 161 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
..- . ..+++...-++.+......|...++.|
T Consensus 258 gve----i-------------~~e~v~~~Qk~ii~~~~~~gkpvi~AT 288 (461)
T 3qtg_A 258 GLH----Y-------------GLDALPIVQRRIVHTSLKYGKPIAVAT 288 (461)
T ss_dssp TTT----S-------------CTTTHHHHHHHHHHHHHHTTCCEEEES
T ss_pred ccc----C-------------CHHHHHHHHHHHHHHHHHhCCCEEEec
Confidence 321 0 012333333555566666676655544
No 91
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=34.40 E-value=29 Score=30.16 Aligned_cols=54 Identities=15% Similarity=0.096 Sum_probs=41.1
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEe
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVS 154 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~ 154 (327)
..+|++.+..+.+. .....++.+++.|+.+.+..++.+..+.+..+++.+|+|.
T Consensus 108 aGAd~itvH~Ea~~-~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~Vl 161 (246)
T 3inp_A 108 AGATSIVFHPEASE-HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVL 161 (246)
T ss_dssp HTCSEEEECGGGCS-CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEE
T ss_pred cCCCEEEEccccch-hHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEE
Confidence 37999999876443 4567788889999988888776666677788888888864
No 92
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=34.25 E-value=1.1e+02 Score=28.02 Aligned_cols=91 Identities=9% Similarity=0.157 Sum_probs=52.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccccc-ceEEeCCHHHHHH--HHHhhcCCCCccCcCCCccchHHH
Q 036840 110 NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-ITVVSPNEDELVA--MANALSGENMFRPIDRNKHSAESL 186 (327)
Q Consensus 110 ~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~-~dvv~~n~~E~~~--l~~~~~~~~~~~~~~~~~~~~~~~ 186 (327)
+++.+....+.+.|++.|++++..+-... .+..+.++ +|++++.-.|++. |+.......-.=.+.+|..+.+++
T Consensus 74 el~~e~~~~L~~~~~~~Gi~~~st~fD~~---svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei 150 (350)
T 3g8r_A 74 RLQPEQMQKLVAEMKANGFKAICTPFDEE---SVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDI 150 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcEEeccCCHH---HHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHH
Confidence 46788899999999999999988874432 22223333 6666544333221 112122111112346677777665
Q ss_pred HhcHHHHHHHHHHcCCCEEEE
Q 036840 187 FQTLKPAILVLLEKGIRLVVL 207 (327)
Q Consensus 187 ~~~~~~~~~~l~~~g~~~vvv 207 (327)
+.+++.+.+.|.+.+++
T Consensus 151 ----~~Ave~i~~~g~~viLl 167 (350)
T 3g8r_A 151 ----DKVVSFMLHRGKDLTIM 167 (350)
T ss_dssp ----HHHHHHHHTTTCCEEEE
T ss_pred ----HHHHHHHHHcCCCEEEE
Confidence 55567777667665553
No 93
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=34.24 E-value=1e+02 Score=28.31 Aligned_cols=74 Identities=12% Similarity=0.090 Sum_probs=44.0
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
..++.++.-.+.+.+...++.+++..++++....+.++.++.++||..|=+-.. ...+.+++ ..+|++.+.-.-
T Consensus 218 ~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~~~d~v~ik~~~ 293 (403)
T 2ox4_A 218 GHTDLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYS-RWGFLPFLEDRSIDVIQPDLGT 293 (403)
T ss_dssp TCSCHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCH-HHHHHHHHHTTCCSEECCCHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCC-HHHHHHHHHcCCCCEEecCccc
Confidence 345555544455567777887887666554455555555666788888744322 23455555 347887775443
No 94
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=34.00 E-value=1.1e+02 Score=27.57 Aligned_cols=72 Identities=13% Similarity=0.165 Sum_probs=45.3
Q ss_pred ccCCHHHHHHHHhhhcC--CcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 85 KFLTPDWIRQFIHHISS--ASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~--~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
..++.++.-.+.+.+.. .++.+++..++++....+.+..++.++||..|=+- .....+.+++ ..+|++.+.-
T Consensus 194 ~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~ 269 (366)
T 1tkk_A 194 QGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESV-FTPRQAFEVLQTRSADLINIKL 269 (366)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTC-CSHHHHHHHHHHTCCSEEEECH
T ss_pred CCCCHHHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCCCCEEEcCCC-CCHHHHHHHHHhCCCCEEEeeh
Confidence 34566554445556777 88888887666555666666666778999998542 2223445555 3578876643
No 95
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=33.99 E-value=29 Score=29.69 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=37.5
Q ss_pred CcEEEEecCCCHHHHHHHHH---HHHhCCCCEEEecCchhhhhhhhcccc--cceEE
Q 036840 102 ASVLMVDANLSPPALAASCK---IAAECNIPVWFEPVSVTKSRRITSVVK--YITVV 153 (327)
Q Consensus 102 ~~~v~~~g~~~~~~~~~l~~---~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv 153 (327)
+|++.+..+.+.+.....++ .+++.|..+.++.++.+..+.+..+++ .+|+|
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l~~g~~D~V 142 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTV 142 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEE
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHhhcCCcCEE
Confidence 99988876543223445556 889999998888866555567777888 78887
No 96
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=32.90 E-value=1.9e+02 Score=28.19 Aligned_cols=105 Identities=13% Similarity=0.097 Sum_probs=69.2
Q ss_pred CCHHHHHHHHhhh-cCCcEEEEecCCCHHHHHHHHHHHHhCC--CCEEEecCchhhhhhhhcccccceEEeCCHHHHHHH
Q 036840 87 LTPDWIRQFIHHI-SSASVLMVDANLSPPALAASCKIAAECN--IPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163 (327)
Q Consensus 87 l~~~~i~~~~~~l-~~~~~v~~~g~~~~~~~~~l~~~a~~~~--~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~l 163 (327)
+++.|...+.-.+ ...|++.++.--+.+.+..+.+...+.+ +.|+.-.+....-+.+.+++..+|-+.+..-++..=
T Consensus 240 lTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgve 319 (550)
T 3gr4_A 240 VSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 319 (550)
T ss_dssp SCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhccc
Confidence 5677666543333 3699999987667788888888776644 567777777666677888888899999888776432
Q ss_pred HHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 164 ANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
.+ .+.+...-++++....+.|...++.|
T Consensus 320 i~-----------------~e~vp~~Qk~iI~~c~~agkpVi~AT 347 (550)
T 3gr4_A 320 IP-----------------AEKVFLAQKMMIGRCNRAGKPVICAT 347 (550)
T ss_dssp SC-----------------GGGHHHHHHHHHHHHHHHTCCEEEES
T ss_pred CC-----------------HHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 21 12232233455555566676655554
No 97
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=32.89 E-value=63 Score=29.49 Aligned_cols=75 Identities=8% Similarity=0.111 Sum_probs=47.9
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~~E 159 (327)
+..++.++-..+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.+++. .+|++.+.-.-
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k~~~ 269 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAEELCPADDVLSRRRLVGQLDMPFIADESV-PTPADVTREVLGGSATAISIKTAR 269 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEESCSCTTSHHHHHHHHHHCSSCEEECTTC-SSHHHHHHHHHHTSCSEEEECHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEECCCCcccHHHHHHHHHhCCCCEEecCCc-CCHHHHHHHHHcCCCCEEEeehhh
Confidence 34566666555566778888888887666555556666677788999998432 22234444443 58888775443
No 98
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=32.73 E-value=87 Score=29.52 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=48.6
Q ss_pred CCHHH-HHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCHHH
Q 036840 87 LTPDW-IRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDE 159 (327)
Q Consensus 87 l~~~~-i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~~E 159 (327)
+++++ ++.+.+.+.+++++.+...++++....+.++.++..++|+.|=........+.+.++ .+|++.+.-..
T Consensus 270 ~t~~e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~q 345 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQ 345 (439)
T ss_dssp BCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEechhh
Confidence 45554 445556778899999998887776777777777788999888543223344444443 47887665544
No 99
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=31.82 E-value=97 Score=27.25 Aligned_cols=89 Identities=17% Similarity=0.175 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHHH--HHhhcCCCCccCcCCCcc-chHHHHhc
Q 036840 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM--ANALSGENMFRPIDRNKH-SAESLFQT 189 (327)
Q Consensus 113 ~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~l--~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (327)
.+.+..+.+.+++.|++++.++-.....+.+.+ .+|++++.-.+++.. ..........=.+.+|.. +++++
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~---~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei--- 161 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSR---YADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEEL--- 161 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHH---HCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHH---
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHH---hCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHH---
Confidence 577888888899999999998865443333333 367766544333211 111111111112345664 66665
Q ss_pred HHHHHHHHHHcCCCEEEEE
Q 036840 190 LKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 190 ~~~~~~~l~~~g~~~vvvt 208 (327)
..+++.+...|.+.+++.
T Consensus 162 -~~Ave~i~~~Gn~~i~L~ 179 (276)
T 1vs1_A 162 -LAAAEYILLEGNWQVVLV 179 (276)
T ss_dssp -HHHHHHHHHTTCCCEEEE
T ss_pred -HHHHHHHHHcCCCeEEEE
Confidence 555666777766444444
No 100
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=31.29 E-value=79 Score=28.94 Aligned_cols=88 Identities=11% Similarity=0.103 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHH--HHHhhcCCCCccCcCCCcc-chHHHHhc
Q 036840 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA--MANALSGENMFRPIDRNKH-SAESLFQT 189 (327)
Q Consensus 113 ~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~--l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (327)
.+.+..+.+.+++.|++++.++-.....+.+. +++|++++.-.+++. |..........=.+.+|.. +++++
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~---~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei--- 229 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVA---EYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEF--- 229 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH---HHCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHH---
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH---HhCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHH---
Confidence 57788888899999999999886543333333 347777665554432 2222222221123355664 66665
Q ss_pred HHHHHHHHHHcCCCEEEE
Q 036840 190 LKPAILVLLEKGIRLVVL 207 (327)
Q Consensus 190 ~~~~~~~l~~~g~~~vvv 207 (327)
..+++.+++.|.+.+++
T Consensus 230 -~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 230 -LLSAEYIANSGNTKIIL 246 (350)
T ss_dssp -HHHHHHHHHTTCCCEEE
T ss_pred -HHHHHHHHHCCCCeEEE
Confidence 45566677776644444
No 101
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=30.59 E-value=1.5e+02 Score=27.35 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=59.2
Q ss_pred CCcEEEEec-----------CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHH--HHHhh
Q 036840 101 SASVLMVDA-----------NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA--MANAL 167 (327)
Q Consensus 101 ~~~~v~~~g-----------~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~--l~~~~ 167 (327)
.++++.+.. .++.+.+..+.+.+++.|++++.++-.....+. +.+++|++++.-.++.. |....
T Consensus 169 Ga~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~---l~~~vd~lkIgs~~~~n~~LL~~~ 245 (385)
T 3nvt_A 169 GLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEV---ALDYVDVIQIGARNMQNFELLKAA 245 (385)
T ss_dssp TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHH---HTTTCSEEEECGGGTTCHHHHHHH
T ss_pred CCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHH---HHhhCCEEEECcccccCHHHHHHH
Confidence 566666543 145677888888999999999999865443333 33457887765554321 22222
Q ss_pred cCCCCccCcCCCc-cchHHHHhcHHHHHHHHHHcCCC-EEEEEeC
Q 036840 168 SGENMFRPIDRNK-HSAESLFQTLKPAILVLLEKGIR-LVVLTLG 210 (327)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~-~vvvt~G 210 (327)
......=.+.+|. .+++++ ..+++.+.+.|.+ .+++-+|
T Consensus 246 a~~gkPVilk~G~~~t~~e~----~~Ave~i~~~Gn~~i~L~~rG 286 (385)
T 3nvt_A 246 GRVDKPILLKRGLSATIEEF----IGAAEYIMSQGNGKIILCERG 286 (385)
T ss_dssp HTSSSCEEEECCTTCCHHHH----HHHHHHHHTTTCCCEEEEECC
T ss_pred HccCCcEEEecCCCCCHHHH----HHHHHHHHHcCCCeEEEEECC
Confidence 2211111234555 566665 5556777766654 4444444
No 102
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=30.45 E-value=2.2e+02 Score=27.04 Aligned_cols=105 Identities=9% Similarity=-0.014 Sum_probs=68.8
Q ss_pred CCHHHHHHHHhhhc-CCcEEEEecCCCHHHHHHHHHHHHhC---CCCEEEecCchhhhhhhhcccccceEEeCCHHHHHH
Q 036840 87 LTPDWIRQFIHHIS-SASVLMVDANLSPPALAASCKIAAEC---NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA 162 (327)
Q Consensus 87 l~~~~i~~~~~~l~-~~~~v~~~g~~~~~~~~~l~~~a~~~---~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~ 162 (327)
+++.+...+...+. .+|++.++.--+.+.+..+.+..++. .+.++.-.++...-+.+.+++..+|-+.+..-++..
T Consensus 170 ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgv 249 (470)
T 1e0t_A 170 LAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGV 249 (470)
T ss_dssp SCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhh
Confidence 56665554433333 69999998766778888888877665 467777777766556788888889999888888754
Q ss_pred HHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 163 MANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 163 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
=.+ .+.+....++.+......|...++-|
T Consensus 250 eig-----------------~e~v~~~qk~ii~~araaGkpvI~AT 278 (470)
T 1e0t_A 250 EIP-----------------VEEVIFAQKMMIEKCIRARKVVITAT 278 (470)
T ss_dssp HSC-----------------HHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred hcC-----------------HHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 222 13333333445555555677655555
No 103
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=30.03 E-value=48 Score=30.50 Aligned_cols=71 Identities=4% Similarity=0.050 Sum_probs=46.0
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNED 158 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~ 158 (327)
.++.++. .+.+.+...++.+++..++++....+.+++++..+||..|=+-. ....+.+++ ..+|++.+.-.
T Consensus 212 ~~~~~~a-~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~i~~~a~d~i~ik~~ 284 (386)
T 1wue_A 212 AYTLADL-PQLQRLDHYQLAMIEQPFAADDFLDHAQLQRELKTRICLDENIR-SLKDCQVALALGSCRSINLKIP 284 (386)
T ss_dssp CCCGGGH-HHHHGGGGSCCSCEECCSCTTCSHHHHHHHTTCSSCEEECTTCC-SHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCHHHH-HHHHHHHhCCCeEEeCCCCcccHHHHHHHHHhcCCCEEeCCccC-CHHHHHHHHHcCCCCEEEEchh
Confidence 3455555 45567788898899887766656666677777789999984422 223455555 34777766443
No 104
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=30.03 E-value=1.1e+02 Score=27.83 Aligned_cols=72 Identities=8% Similarity=0.054 Sum_probs=40.5
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNE 157 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~ 157 (327)
.++.++.-.+.+.+...++.+++..++++....+.++.++.++||..|=+-......+.++++ .+|++.+.-
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~ 283 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGV 283 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCc
Confidence 345555444455666777767776655444555555556667888887443221234444433 477776643
No 105
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=29.85 E-value=69 Score=27.13 Aligned_cols=53 Identities=15% Similarity=0.059 Sum_probs=38.4
Q ss_pred cCCcEEEEecC--CCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEE
Q 036840 100 SSASVLMVDAN--LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVV 153 (327)
Q Consensus 100 ~~~~~v~~~g~--~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv 153 (327)
..+|.+++..+ .+ +.....++.+++.|+.+.+..++....+.+..+++.+|++
T Consensus 84 aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v 138 (230)
T 1tqj_A 84 AGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLI 138 (230)
T ss_dssp HTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEE
T ss_pred cCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEE
Confidence 36899988876 44 3466778888889998888775444445667777788876
No 106
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=29.58 E-value=2.1e+02 Score=28.25 Aligned_cols=106 Identities=13% Similarity=0.049 Sum_probs=69.6
Q ss_pred cCCHHHHHHHHhhh-cCCcEEEEecCCCHHHHHHHHHHHHhC--CCCEEEecCchhhhhhhhcccccceEEeCCHHHHHH
Q 036840 86 FLTPDWIRQFIHHI-SSASVLMVDANLSPPALAASCKIAAEC--NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA 162 (327)
Q Consensus 86 ~l~~~~i~~~~~~l-~~~~~v~~~g~~~~~~~~~l~~~a~~~--~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~ 162 (327)
.+++.|.+.+.-.+ ...|++.++.--+.+.+..+.++..+. .++++.-.+....-+.+.+++..+|-+.+-.-++..
T Consensus 190 ~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgv 269 (606)
T 3t05_A 190 GITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGV 269 (606)
T ss_dssp SSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHH
T ss_pred CCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccC
Confidence 36777766543222 579999998766778888888777665 466777777766667788888889999887777643
Q ss_pred HHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 163 MANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 163 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
=.+ .+++...-+++++...+.|...++-|
T Consensus 270 ei~-----------------~e~vp~~Qk~ii~~~~~~gkpvi~AT 298 (606)
T 3t05_A 270 EIP-----------------PEKVPMVQKDLIRQCNKLGKPVITAT 298 (606)
T ss_dssp HSC-----------------GGGHHHHHHHHHHHHHHHTCCEEEES
T ss_pred cCC-----------------HHHHHHHHHHHHHHHHHcCCCeEEeh
Confidence 211 12333333555555566676655544
No 107
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=28.75 E-value=2.9e+02 Score=26.47 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=69.0
Q ss_pred CCHHHHHHHHhhhc-CCcEEEEecCCCHHHHHHHHHHHHhC--CCCEEEecCchhhhhhhhcccccceEEeCCHHHHHHH
Q 036840 87 LTPDWIRQFIHHIS-SASVLMVDANLSPPALAASCKIAAEC--NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVAM 163 (327)
Q Consensus 87 l~~~~i~~~~~~l~-~~~~v~~~g~~~~~~~~~l~~~a~~~--~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~l 163 (327)
+++.+...+.-.+. ..|++.++.--+.+.+..+.+...+. .+.|+.-.+....-+.+.+++..+|-+.+..-++..=
T Consensus 190 ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvE 269 (499)
T 3hqn_D 190 VSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVE 269 (499)
T ss_dssp SCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCc
Confidence 56776655433333 58999998766778888888777553 4677777777666677888888899998887776432
Q ss_pred HHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 164 ANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
.+ .+++...-++++....+.|...++.|
T Consensus 270 i~-----------------~e~vp~~Qk~iI~~c~~agkpVi~AT 297 (499)
T 3hqn_D 270 IP-----------------AEKVVVAQKILISKCNVAGKPVICAT 297 (499)
T ss_dssp SC-----------------HHHHHHHHHHHHHHHHHHTCCEEEES
T ss_pred CC-----------------HHHHHHHHHHHHHHHHHcCCCeEEee
Confidence 11 23333333555566666676655544
No 108
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=28.73 E-value=1.2e+02 Score=27.69 Aligned_cols=73 Identities=4% Similarity=0.077 Sum_probs=44.0
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNED 158 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~ 158 (327)
..++.++.-.+.+.+....+.+++..++++....+.+..+..++||..|=+-. ....+.+++ ..+|++.+.-.
T Consensus 199 ~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPI~~de~i~-~~~~~~~~i~~~~~d~v~ik~~ 273 (384)
T 2pgw_A 199 EGWSVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREKVGIPIVADQAAF-TLYDVYEICRQRAADMICIGPR 273 (384)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEESTTCC-SHHHHHHHHHTTCCSEEEECHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHHcCCCCEEEEcch
Confidence 34565554445566777777777766655455556666666788998875422 223445555 34788776443
No 109
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=28.41 E-value=2.4e+02 Score=24.60 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=29.2
Q ss_pred HHHHHhhhcC--CcEEEEecCCCHHHHHHHHHHHHhCCCCEEEe
Q 036840 92 IRQFIHHISS--ASVLMVDANLSPPALAASCKIAAECNIPVWFE 133 (327)
Q Consensus 92 i~~~~~~l~~--~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d 133 (327)
++.+...++. ++++=++-..+.+.+..+++.+++.+.+|+..
T Consensus 122 ~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~~kvI~S 165 (276)
T 3o1n_A 122 IDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHNVAVIMS 165 (276)
T ss_dssp HHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCCCEEEEE
Confidence 3333344442 67887776667788888888888888887774
No 110
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=28.20 E-value=1e+02 Score=26.76 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccccceEEeCCHHHHHH--HHHhhcCCCCccCcCCCcc-chHHHHhc
Q 036840 113 PPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELVA--MANALSGENMFRPIDRNKH-SAESLFQT 189 (327)
Q Consensus 113 ~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~~--l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (327)
.+.+..+.+.+++.|++++.++-.....+.+. +.+|+++++-.+.+. +..........=.+.+|.. +++++
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~---~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~--- 146 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVA---KYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQEL--- 146 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHH---HHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHH---
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHH---hhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHH---
Confidence 67788888899999999999986544333333 347888776665533 2232222111112344554 66665
Q ss_pred HHHHHHHHHHcCCC-EEEEEeC
Q 036840 190 LKPAILVLLEKGIR-LVVLTLG 210 (327)
Q Consensus 190 ~~~~~~~l~~~g~~-~vvvt~G 210 (327)
..+++.+...|.+ .+++-+|
T Consensus 147 -~~Av~~i~~~Gn~~i~L~~RG 167 (262)
T 1zco_A 147 -LYSAEYIMAQGNENVILCERG 167 (262)
T ss_dssp -HHHHHHHHTTTCCCEEEEECC
T ss_pred -HHHHHHHHHCCCCeEEEEECC
Confidence 4555667766654 4444444
No 111
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=28.19 E-value=79 Score=29.01 Aligned_cols=73 Identities=7% Similarity=0.029 Sum_probs=45.5
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNED 158 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~ 158 (327)
..++.++-..+.+.+...++.+++..++++....+.+.+++.++||..|=+-. ....+.+++ ..+|++.+.-.
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~~~~~~~d~v~~k~~ 277 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNASSPAPIMADESIE-CVEDAFNLAREGAASVFALKIA 277 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHHCSSCEEESTTCS-SHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCCHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHhCCCCEEeCCCcC-CHHHHHHHHHcCCCCEEEeccc
Confidence 34555554445566777888888876665556666666777789999884321 223444555 35777766543
No 112
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=27.61 E-value=93 Score=28.96 Aligned_cols=76 Identities=8% Similarity=0.099 Sum_probs=48.1
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDEL 160 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E~ 160 (327)
+..++.++-..+.+.+...++.+++..++++....+.++.++.++||..|=+- .....+.+++ ..+|++.+.-.-.
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~li~~~a~D~v~ik~~~~ 315 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAMNIVPISGGEHE-FSVIGCAELINRKAVSVLQYDTNRV 315 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHTCSSCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhCCCCCEEeCCCC-CCHHHHHHHHHcCCCCEEecChhhc
Confidence 34456666555556777788878887766555666666667778999887432 1223445555 3588887765543
No 113
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=27.52 E-value=2.8e+02 Score=24.19 Aligned_cols=111 Identities=16% Similarity=0.119 Sum_probs=55.3
Q ss_pred CCceEEEeecCCcchHH-HHHHHHhcCCCccCeeecCCCCce-EEEEEecCC-CCEEEEEecchhhccc-----CCHHHH
Q 036840 21 SKPYMISALGLDMAGNI-LLEHWKSAGLSTEGIRRQKDIDTA-VVSNILDVN-GELAAAVASVESIEKF-----LTPDWI 92 (327)
Q Consensus 21 ~~v~~i~~vG~D~~g~~-i~~~l~~~gV~~~~i~~~~~~~t~-~~~~~~d~~-g~~~~~~~~~~~~~~~-----l~~~~i 92 (327)
.+..+++.+|.-..|+. +.+.|-...+....- .+. .|. ....+...+ +.....+..+ +.... +.....
T Consensus 8 ~~~g~v~ivG~~nvGKSTLin~l~g~~~~i~s~--~~~-tT~~~~~~~~~~~~~~~i~lvDTP-G~~~~~~~~~l~~~~~ 83 (308)
T 3iev_A 8 MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISP--KAG-TTRMRVLGVKNIPNEAQIIFLDTP-GIYEPKKSDVLGHSMV 83 (308)
T ss_dssp CEEEEEEEECSTTSSHHHHHHHHHTSCCSCCCS--SSC-CCCSCEEEEEEETTTEEEEEEECC-CCCCCCTTCHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCCccccCC--CCC-ceeeEEEEEEecCCCCeEEEEECc-CCCccccchhHHHHHH
Confidence 35789999999989986 666776555542211 111 111 111122222 3333334433 32211 112222
Q ss_pred HHHHhhhcCCcEEEE--ecC--CCHHHHHHHHHHHHhCCCCEEEecC
Q 036840 93 RQFIHHISSASVLMV--DAN--LSPPALAASCKIAAECNIPVWFEPV 135 (327)
Q Consensus 93 ~~~~~~l~~~~~v~~--~g~--~~~~~~~~l~~~a~~~~~~v~~d~~ 135 (327)
......+..+|++++ +.. ........+++.+++.++|+++=.+
T Consensus 84 ~~~~~~l~~aD~il~VvD~~~~~~~~~~~~~~~~l~~~~~pvilV~N 130 (308)
T 3iev_A 84 EIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVIN 130 (308)
T ss_dssp HHHHHHHHHCSEEEEEEETTTBSCHHHHHHHHHHTGGGCCCEEEEEE
T ss_pred HHHHHHhhcCCEEEEEEeCCCCCCchhHHHHHHHHHhcCCCEEEEEE
Confidence 333456778887554 432 2344333336777777888776443
No 114
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=27.21 E-value=1.4e+02 Score=26.73 Aligned_cols=72 Identities=8% Similarity=0.028 Sum_probs=43.7
Q ss_pred ccCCHHHHHHHHhhhcCCcEE--EEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 85 KFLTPDWIRQFIHHISSASVL--MVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v--~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
..++.++.-.+.+.+...++. +++..++++....+.++.++.++||..|=+-. ....+.+++ ..+|++.+.-
T Consensus 191 ~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~ipia~dE~~~-~~~~~~~~i~~~~~d~v~ik~ 266 (345)
T 2zad_A 191 MGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESAR-TKFDVMRLVKEEAVDYVNIKL 266 (345)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSSSCEEESTTCC-SHHHHHHHHHHTCCSEEEECH
T ss_pred CCCCHHHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhCCCCEEEeCCcC-CHHHHHHHHHhCCCCEEEEec
Confidence 345555544455567777777 88776665555556666666788998884422 223444444 3578876643
No 115
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=26.87 E-value=96 Score=24.08 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=23.4
Q ss_pred CCcEEEEecCCCH-HHHHHHHHHHHhCCCCEEEecC
Q 036840 101 SASVLMVDANLSP-PALAASCKIAAECNIPVWFEPV 135 (327)
Q Consensus 101 ~~~~v~~~g~~~~-~~~~~l~~~a~~~~~~v~~d~~ 135 (327)
++.+|++..+.++ +....+-.+|++.++|+.+-.+
T Consensus 48 kakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 48 ISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp CEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 4667777776665 4666777777777888655543
No 116
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=26.80 E-value=70 Score=29.73 Aligned_cols=91 Identities=5% Similarity=-0.046 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccccc-ceEEeCCHHHHHH--HHHhhcCCCCccCcCCCccchHHHH
Q 036840 111 LSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY-ITVVSPNEDELVA--MANALSGENMFRPIDRNKHSAESLF 187 (327)
Q Consensus 111 ~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~-~dvv~~n~~E~~~--l~~~~~~~~~~~~~~~~~~~~~~~~ 187 (327)
++.+....+.+.|++.|++++..+-... .+..+.++ +|++++.-.|++. |+.......-.=.+.+|..+.+++
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~---svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei- 173 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEG---SADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDV- 173 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHH---HHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHH-
Confidence 4567788888899999998887764322 22223333 5666655444322 122222111112346677777665
Q ss_pred hcHHHHHHHHHHcCCCEEEEE
Q 036840 188 QTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 188 ~~~~~~~~~l~~~g~~~vvvt 208 (327)
+.+++.+.+.|.+.|++-
T Consensus 174 ---~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 174 ---HEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp ---HHHHHHHHTTTCCCEEEE
T ss_pred ---HHHHHHHHHCCCCcEEEE
Confidence 556677777776434433
No 117
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=26.21 E-value=2.6e+02 Score=26.96 Aligned_cols=106 Identities=10% Similarity=-0.002 Sum_probs=68.5
Q ss_pred cCCHHHHHHH-Hhhhc-CCcEEEEecCCCHHHHHHHHHHHHhC--CCCEEEecCchhhhhhhhcccccceEEeCCHHHHH
Q 036840 86 FLTPDWIRQF-IHHIS-SASVLMVDANLSPPALAASCKIAAEC--NIPVWFEPVSVTKSRRITSVVKYITVVSPNEDELV 161 (327)
Q Consensus 86 ~l~~~~i~~~-~~~l~-~~~~v~~~g~~~~~~~~~l~~~a~~~--~~~v~~d~~~~~~~~~~~~~l~~~dvv~~n~~E~~ 161 (327)
.+++.|.+.+ .-.+. +.|++.++.--+.+.+..+.+...+. .+.++.-.+....-+.+.+++..+|-+.+..-++.
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLg 283 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLG 283 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhc
Confidence 3677777655 32333 58999998766778888888777654 46677777776655678888888898888777654
Q ss_pred HHHHhhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEEE
Q 036840 162 AMANALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVLT 208 (327)
Q Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 208 (327)
.=.+ .+++...-++.+......|...++.|
T Consensus 284 vei~-----------------~e~v~~~qk~ii~~~~~~gkpvi~AT 313 (511)
T 3gg8_A 284 MEIP-----------------PEKVFLAQKMMIAKCNVVGKPVITAT 313 (511)
T ss_dssp HHSC-----------------HHHHHHHHHHHHHHHHHTTCCEEEES
T ss_pred CcCC-----------------HHHHHHHHHHHHHHHHHcCCCeEEeh
Confidence 2111 23433333555566666676655544
No 118
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=26.19 E-value=67 Score=29.19 Aligned_cols=74 Identities=7% Similarity=0.091 Sum_probs=48.3
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
..++.+.-..+.+.+...++.+++..++++....+.+++++..+||..|=+- .....+.+++ ..+|++.+.-.-
T Consensus 197 ~~~~~~~A~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~~~~~a~d~i~~d~~~ 272 (370)
T 2chr_A 197 QAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESL-STLASAFDLARDRSVDVFSLKLCN 272 (370)
T ss_dssp TCCCTHHHHHHHHHHHTTTCCEEECCSCSSCHHHHHHHHHHCSSEEEESSSC-CSHHHHHHHHTTTCCSEECCCHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCceecCCCChhhhhhhhHHhhhccCCccCCccC-CCHHHHHHHHHcCCCcEEEeCCcc
Confidence 3455555444556778888989988776666667777777888999988432 1223444454 358888775543
No 119
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=26.04 E-value=76 Score=28.78 Aligned_cols=71 Identities=8% Similarity=0.095 Sum_probs=38.5
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccccc--ceEEeCCH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVKY--ITVVSPNE 157 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~~--~dvv~~n~ 157 (327)
.++.++.-.+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.++++. +|++.+.-
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESL-SSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEECCSCTTCHHHHHHHHHHCSSEEEESTTC-CSHHHHHHHHHTTCCSEEEECH
T ss_pred CCCHHHHHHHHHHHHhcCcceEeCCCCcccHHHHHHHHHhCCCCEEeCCCC-CCHHHHHHHHHhCCCCEEEEch
Confidence 345544433445556666666766555444555555556667787777432 222344444443 77766643
No 120
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=25.91 E-value=1e+02 Score=28.97 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=47.4
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+..++.++-..+.+.|...++.+++..++++....+.++++..++||..|=+- .....+.+++ ..+|++.+.-.-
T Consensus 211 n~~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~l~~g~~D~v~~d~~~ 287 (433)
T 3rcy_A 211 HGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERL-TTKAEFAPVLREGAAAILQPALGR 287 (433)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTC-CSHHHHHHHHHTTCCSEECCCHHH
T ss_pred CCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCC-CCHHHHHHHHHcCCCCEEEeCchh
Confidence 34456665555556677788888887666555666666667778999888432 1223445555 358888776544
No 121
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=25.68 E-value=75 Score=28.84 Aligned_cols=70 Identities=10% Similarity=0.104 Sum_probs=43.7
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
.++.++ -.+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.+++ ..+|++.+.-
T Consensus 192 ~~~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~i~~~~~d~v~ik~ 263 (369)
T 2zc8_A 192 AYSLAN-LAQLKRLDELRLDYIEQPLAYDDLLDHAKLQRELSTPICLDESL-TGAEKARKAIELGAGRVFNVKP 263 (369)
T ss_dssp CCCGGG-HHHHHGGGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTC-CSHHHHHHHHHHTCCSEEEECH
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCCcccHHHHHHHHhhCCCCEEEcCcc-CCHHHHHHHHHhCCCCEEEEch
Confidence 345554 44556678888888887666555555666666778999988542 2223445554 3478877644
No 122
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=25.58 E-value=3.3e+02 Score=23.62 Aligned_cols=98 Identities=7% Similarity=0.049 Sum_probs=60.7
Q ss_pred hhcCCcEEEEec-CCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc-cceEEeCCHH----------HHHHHHH
Q 036840 98 HISSASVLMVDA-NLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK-YITVVSPNED----------ELVAMAN 165 (327)
Q Consensus 98 ~l~~~~~v~~~g-~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~-~~dvv~~n~~----------E~~~l~~ 165 (327)
....+|.+.+-. -++++.+..+.+.|++.|.-+.++...... +...+. .++++-+|-+ -...|..
T Consensus 123 r~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~E---l~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~ 199 (258)
T 4a29_A 123 YNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDEND---LDIALRIGARFIGIMSRDFETGEINKENQRKLIS 199 (258)
T ss_dssp HHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHH---HHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHT
T ss_pred HHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHH---HHHHhcCCCcEEEEeCCCccccccCHHHHHHHHh
Confidence 445788876644 467888999999999999999999876432 222222 4667766543 3344443
Q ss_pred hhcCCCCccCcCCCccchHHHHhcHHHHHHHHHHcCCCEEEE
Q 036840 166 ALSGENMFRPIDRNKHSAESLFQTLKPAILVLLEKGIRLVVL 207 (327)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~vvv 207 (327)
.+.. +....-++|..+++++ ..+.+.|++.++|
T Consensus 200 ~ip~-~~~~VsESGI~t~~dv--------~~l~~~G~~a~LV 232 (258)
T 4a29_A 200 MIPS-NVVKVAKLGISERNEI--------EELRKLGVNAFLI 232 (258)
T ss_dssp TSCT-TSEEEEEESSCCHHHH--------HHHHHTTCCEEEE
T ss_pred hCCC-CCEEEEcCCCCCHHHH--------HHHHHCCCCEEEE
Confidence 3221 1111235677777664 5566678777666
No 123
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=25.45 E-value=89 Score=28.86 Aligned_cols=73 Identities=7% Similarity=0.045 Sum_probs=46.0
Q ss_pred cccCCHHHHHHHHhhh--cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 84 EKFLTPDWIRQFIHHI--SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l--~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
+..++.++-..+.+.+ ...++.+++..++++....+.+++++.++||..|=+- .....+.+++ ..+|++.+.-
T Consensus 225 N~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~i~~k~ 301 (393)
T 3u9i_A 225 NCGYTAPDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRRVPVAADESV-ASATDAARLARNAAVDVLNIKL 301 (393)
T ss_dssp CSCCCHHHHHHHHHTTTTTTCCCSEEECCSCTTCTTHHHHHHHTCSSCEEESTTC-CSHHHHHHHHHTTCCSEEEECH
T ss_pred cCCCCHHHHHHHHHHHhhCCCCeEEEECCCCCCcHHHHHHHHhhCCCcEEeCCcC-CCHHHHHHHHHcCCCCEEEecc
Confidence 4456666654555677 6778888887776655666667777788999988432 1123344444 3477776654
No 124
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=25.16 E-value=1.2e+02 Score=28.59 Aligned_cols=73 Identities=11% Similarity=0.174 Sum_probs=48.4
Q ss_pred CCHHH-HHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCHHH
Q 036840 87 LTPDW-IRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNEDE 159 (327)
Q Consensus 87 l~~~~-i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~~E 159 (327)
+++++ ++.+.+.+.+++++.+.-.++++....+.++.++..+||+.|=........+.+.++ .+|++.+.-.-
T Consensus 273 ~t~~eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~q 348 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQ 348 (436)
T ss_dssp BCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhh
Confidence 45554 444556778899999988877777777777777788999888643222334444443 47887665443
No 125
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=25.09 E-value=83 Score=29.13 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=46.9
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+..++.+++ .+.+.+...++.+++..++++....+.+++++.++||..|=+-. ....+.+++ ..+|++.+.-.-
T Consensus 213 N~~w~~~~~-~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~~~~~~~d~v~~k~~~ 288 (400)
T 3mwc_A 213 NSSFELDQW-ETFKAMDAAKCLFHEQPLHYEALLDLKELGERIETPICLDESLI-SSRVAEFVAKLGISNIWNIKIQR 288 (400)
T ss_dssp TTCCCGGGH-HHHHHHGGGCCSCEESCSCTTCHHHHHHHHHHSSSCEEESTTCC-SHHHHHHHHHTTCCSEEEECHHH
T ss_pred CCCCCHHHH-HHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHHHhcCCCCEEEEcchh
Confidence 334555553 44567778888888877766556666677777889999984322 223445555 458887775543
No 126
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=24.89 E-value=80 Score=29.02 Aligned_cols=73 Identities=7% Similarity=0.012 Sum_probs=44.0
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNED 158 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~ 158 (327)
..++.++-..+.+.+...++.+++..++++....+.+++++.++||..|=+- .....+.+++ ..+|++.+.-.
T Consensus 201 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 201 QGLEIDEAVPRVLDVAQFQPDFIEQPVRAHHFELMARLRGLTDVPLLADESV-YGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp TCCCGGGHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTC-CSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHHhCCCCEEEeCCc-CCHHHHHHHHHcCCCCEEEeccc
Confidence 3345444334445667778878877666555666666667778999988432 2223444444 35788766543
No 127
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=24.54 E-value=87 Score=28.88 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=36.8
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeC
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSP 155 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~ 155 (327)
.++.++.-.+.+.+...++.+++..++++....+.++.++.++||..|=+-. ....+.+++ ..+|++.+
T Consensus 228 ~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 228 LLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSY-TRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp CSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCC-TTHHHHHHHHTTCCSEECC
T ss_pred CCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHHHcCCCCEEec
Confidence 3455544444455666777777665554444455555555677777764321 123344444 34666644
No 128
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.40 E-value=1.5e+02 Score=21.37 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=28.4
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEE
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWF 132 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~ 132 (327)
.++.++++..+.+++....+...|...++|++.
T Consensus 30 gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 30 GGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp TCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 468899998888899999999999999999743
No 129
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=23.32 E-value=1.2e+02 Score=22.41 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=27.5
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEE
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWF 132 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~ 132 (327)
.++.+|++..+.+++....+...|+..++|++.
T Consensus 36 gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 36 GEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp TCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEE
T ss_pred CCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 357889998888888899999999999998654
No 130
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=23.29 E-value=1.6e+02 Score=27.02 Aligned_cols=75 Identities=8% Similarity=0.057 Sum_probs=48.5
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+..++.++--.+.+.+...++.+++..++++....+.+++++.++||..|=+- .....+.+++ ..+|++.+.-.-
T Consensus 227 N~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 227 NQGLDMAEAMHRTRQIDDLGLEWIEEPVVYDNFDGYAQLRHDLKTPLMIGENF-YGPREMHQALQAGACDLVMPDFMR 303 (390)
T ss_dssp TTCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTC-CSHHHHHHHHHTTCCSEECCBHHH
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhcCCCEEeCCCc-CCHHHHHHHHHcCCCCEEEeCccc
Confidence 34566666545556778888888887776555666666777788999998442 1223444554 358888775544
No 131
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.46 E-value=1.3e+02 Score=22.67 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=33.1
Q ss_pred cCCchHHHHHHHHHcCCCceEEEeecCCcchHHHHHHHHhcCC
Q 036840 5 LGGVARNVAECMSKLGSKPYMISALGLDMAGNILLEHWKSAGL 47 (327)
Q Consensus 5 ~GG~~~N~a~~la~LG~~v~~i~~vG~D~~g~~i~~~l~~~gV 47 (327)
.||........+.+-.....+|+-|.-+.--+.|++.+...|.
T Consensus 7 ~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~~g~ 49 (123)
T 2dha_A 7 GGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCP 49 (123)
T ss_dssp SCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHTTSC
T ss_pred CCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 4665555666666555678899999999888899999998874
No 132
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=21.87 E-value=2.2e+02 Score=26.21 Aligned_cols=73 Identities=12% Similarity=0.149 Sum_probs=49.4
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
+..++.++--.+.+.+...++.+++..++.+.+..+.+++++..+||..|=+-.. ...+.+++ ..+|++.+..
T Consensus 240 N~~~~~~~A~~~~~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~-~~~~~~~i~~~a~div~~d~ 314 (412)
T 4h1z_A 240 HWAHTASEAVALIKAMEPHGLWFAEAPVRTEDIDGLARVAASVSTAIAVGEEWRT-VHDMVPRVARRALAIVQPEM 314 (412)
T ss_dssp CSCCCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSEEEECTTCCS-HHHHHHHHHTTCCSEECCCH
T ss_pred ccCCCHHHHHHHHHhhcccccceecCCCCccchHHHHHHHhhcCCccccCCcccc-hHhHHHHHHcCCCCEEEecC
Confidence 3456666644555677889999999887766677777888888999998854321 22334443 3478887763
No 133
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=21.77 E-value=2.6e+02 Score=25.73 Aligned_cols=73 Identities=5% Similarity=0.043 Sum_probs=47.8
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+..++.++-..+.+.+...++.+++..++ ....+.+++++.++||..|=+- .....+.+++ ..+|++.+.-.-
T Consensus 220 N~~w~~~~A~~~~~~l~~~~i~~iEqP~~--d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~a~d~v~~k~~~ 294 (398)
T 4dye_A 220 NAAWSVPDSVRAGIALEELDLEYLEDPCV--GIEGMAQVKAKVRIPLCTNMCV-VRFEDFAPAMRLNAVDVIHGDVYK 294 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSS--HHHHHHHHHHHCCSCEEESSSC-CSGGGHHHHHHTTCCSEEEECHHH
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEcCCCC--CHHHHHHHHhhCCCCEEeCCcC-CCHHHHHHHHHhCCCCEEEeCccc
Confidence 44566666555566778888888888776 4666667777789999998432 2223445554 358888775544
No 134
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=21.45 E-value=76 Score=29.09 Aligned_cols=72 Identities=6% Similarity=0.014 Sum_probs=42.2
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCH
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNE 157 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~ 157 (327)
..++.++-..+.+.+...++.+++..++++....+.+++++.++||..|=+-. ....+.+++ ..+|++.+.-
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~~~~~a~d~v~~k~ 275 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLIEQPVSAHDNAALVRLSQQIETAILADEAVA-TAYDGYQLAQQGFTGAYALKI 275 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEEECCBCTTCHHHHHHHHHHSSSEEEESTTCC-SHHHHHHHHHTTCCSEEEECH
T ss_pred CCCCHHHHHHHHHHHhhcCccceeCCCCcccHHHHHHHHHhCCCCEEECCCcC-CHHHHHHHHHcCCCCEEEecc
Confidence 34555554444556666777777776655555666666667788888874321 123344444 3477776644
No 135
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=21.35 E-value=65 Score=29.59 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=37.4
Q ss_pred ccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeC
Q 036840 85 KFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSP 155 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~ 155 (327)
..++.++-..+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.+++ ..+|++.+
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFEQPTPADDLETLREITRRTNVSVMADESV-WTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTC-SSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCcc-CCHHHHHHHHHcCCCCEEEE
Confidence 3455555444455666667777776655444444555555567788777321 1223344444 34666544
No 136
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=21.26 E-value=1.5e+02 Score=27.61 Aligned_cols=64 Identities=11% Similarity=0.145 Sum_probs=43.5
Q ss_pred HhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 96 IHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 96 ~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
.+.+...++.+++.+++++....+.++.++..+||..|=+.......+.+++ ..+|++.+.-.-
T Consensus 277 ~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~ 342 (427)
T 2pa6_A 277 KALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQ 342 (427)
T ss_dssp HHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEEcccc
Confidence 3467788999999887776677777777778899999865322233445544 357887775443
No 137
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=21.17 E-value=1.4e+02 Score=27.42 Aligned_cols=71 Identities=8% Similarity=0.147 Sum_probs=40.4
Q ss_pred ccCCHHHHHHHHhhhcCCcE--EEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHH
Q 036840 85 KFLTPDWIRQFIHHISSASV--LMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNED 158 (327)
Q Consensus 85 ~~l~~~~i~~~~~~l~~~~~--v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~ 158 (327)
..++.++-..+.+.+...++ .+++..++++....+.+..++.++|| |= +......+.+++ ..+|++.+.-.
T Consensus 196 ~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~iPI--dE-~~~~~~~~~~~~~~~~~d~v~~k~~ 270 (391)
T 3gd6_A 196 HLLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDYPI--SE-HVWSFKQQQEMIKKDAIDIFNISPV 270 (391)
T ss_dssp TCSCHHHHHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSSCE--EE-ECCCHHHHHHHHHHTCCSEEEECHH
T ss_pred CCcCHHHHHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHcCCCc--CC-CCCCHHHHHHHHHcCCCCEEEECch
Confidence 34566555445566777777 77776665544556666666677887 32 222223444444 34777666543
No 138
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=21.09 E-value=1.3e+02 Score=21.70 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=26.9
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEE
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWF 132 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~ 132 (327)
.++.++++..+.+++....+-..|+.+++|++.
T Consensus 31 gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 31 GGAKLIIVARNARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp TCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 458888888888888888888889988888653
No 139
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=21.08 E-value=90 Score=25.54 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=38.0
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchh-hhhhhhccccc-ceEEeCC
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVT-KSRRITSVVKY-ITVVSPN 156 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~-~~~~~~~~l~~-~dvv~~n 156 (327)
..+|.+.+......+....+++.+++.|.++.+++...+ ..+.+..+++. +|++.++
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 468999988765556678888899999999888743322 12334444444 7776543
No 140
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=21.05 E-value=69 Score=29.28 Aligned_cols=64 Identities=3% Similarity=0.062 Sum_probs=40.4
Q ss_pred HHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhh-hhccc--ccceEEeCCHH
Q 036840 95 FIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRR-ITSVV--KYITVVSPNED 158 (327)
Q Consensus 95 ~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~-~~~~l--~~~dvv~~n~~ 158 (327)
+.+.+...++.+++..++++....+.+++++.++||..|=+-...... +.+++ ..+|++.+.-.
T Consensus 227 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~ 293 (377)
T 2pge_A 227 RLKRLSQFHLHSIEQPIRQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPS 293 (377)
T ss_dssp HHHHHHTTCCSEEECCBCSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHH
T ss_pred HHHHHhcCCCcEEEccCCcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECch
Confidence 446677788889988776555666667777778999998543221111 33444 34777766443
No 141
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=20.95 E-value=2.3e+02 Score=25.69 Aligned_cols=72 Identities=11% Similarity=0.146 Sum_probs=46.7
Q ss_pred cccCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCC
Q 036840 84 EKFLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPN 156 (327)
Q Consensus 84 ~~~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n 156 (327)
+..++.++-..+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.+++ ..+|++.+.
T Consensus 205 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~-~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 205 NGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQL-YTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp TTCCCHHHHHHHHHHTTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTC-CSHHHHHHHHHTTCCSEECCC
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCc-cCHHHHHHHHHcCCCCEEEeC
Confidence 34566666555667788899999988776655666666777788999998432 1223344443 347776553
No 142
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=20.68 E-value=93 Score=26.67 Aligned_cols=54 Identities=11% Similarity=0.074 Sum_probs=39.2
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHHHhC---------CCCEEEecCchhhhhhhhcccccceEEe
Q 036840 100 SSASVLMVDANLSPPALAASCKIAAEC---------NIPVWFEPVSVTKSRRITSVVKYITVVS 154 (327)
Q Consensus 100 ~~~~~v~~~g~~~~~~~~~l~~~a~~~---------~~~v~~d~~~~~~~~~~~~~l~~~dvv~ 154 (327)
..+|++.+..+... .....++.+++. |+.+.+..++.+..+.+..+++.+|++.
T Consensus 91 aGAd~itvH~ea~~-~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D~vl 153 (237)
T 3cu2_A 91 NGANLVTLQLEQYH-DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQIDVIQ 153 (237)
T ss_dssp TTCSEEEEETTCTT-SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCSEEE
T ss_pred cCCCEEEEecCCcc-cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCceee
Confidence 46899777766543 366788888888 8888877765455567777888888873
No 143
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=20.54 E-value=1e+02 Score=27.83 Aligned_cols=70 Identities=10% Similarity=0.162 Sum_probs=40.9
Q ss_pred CCHHHHH-HHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhcccc--cceEEeCCH
Q 036840 87 LTPDWIR-QFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVVK--YITVVSPNE 157 (327)
Q Consensus 87 l~~~~i~-~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l~--~~dvv~~n~ 157 (327)
++.++.- .+.+.+...++.+++..++++....+.+..++.++||..|=+- .....+.++++ .+|++.+.-
T Consensus 196 ~~~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~-~~~~~~~~~i~~~~~d~v~ik~ 268 (369)
T 2p8b_A 196 WKNSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSKTDLPLMIDEGL-KSSREMRQIIKLEAADKVNIKL 268 (369)
T ss_dssp TBSHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHTCCSCEEESTTC-CSHHHHHHHHHHTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEeCCCC-CCHHHHHHHHHhCCCCEEEeec
Confidence 4444443 4455677777777776655544555556666678888887432 22234444444 577776644
No 144
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=20.31 E-value=1.6e+02 Score=27.57 Aligned_cols=73 Identities=4% Similarity=0.069 Sum_probs=45.0
Q ss_pred CCHHHHHHHHhh-hcCCcEEEEecCCCHHHHHHHHHHHHhC--CCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 87 LTPDWIRQFIHH-ISSASVLMVDANLSPPALAASCKIAAEC--NIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 87 l~~~~i~~~~~~-l~~~~~v~~~g~~~~~~~~~l~~~a~~~--~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
+++++.-.+.+. ..+.++.++..+++++....+.++.++. .+||..|=........+.+++ ..+|++.+.-.-
T Consensus 279 ~t~~eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~ 356 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQ 356 (444)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccc
Confidence 344443333333 3458899998887766666666666665 789998865233334555555 458888775544
No 145
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=20.04 E-value=1.2e+02 Score=27.77 Aligned_cols=72 Identities=11% Similarity=0.165 Sum_probs=45.5
Q ss_pred cCCHHHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEecCchhhhhhhhccc--ccceEEeCCHHH
Q 036840 86 FLTPDWIRQFIHHISSASVLMVDANLSPPALAASCKIAAECNIPVWFEPVSVTKSRRITSVV--KYITVVSPNEDE 159 (327)
Q Consensus 86 ~l~~~~i~~~~~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d~~~~~~~~~~~~~l--~~~dvv~~n~~E 159 (327)
.++.++... .+.+...++.+++..++++....+.+.+++.++||..|=+- .....+.+++ ..+|++.+.-.-
T Consensus 200 ~~~~~~A~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~-~~~~~~~~~~~~~a~d~v~~k~~~ 273 (388)
T 3qld_A 200 SYRPEDAPV-LRQLDAYDLQFIEQPLPEDDWFDLAKLQASLRTPVCLDESV-RSVRELKLTARLGAARVLNVKPGR 273 (388)
T ss_dssp CCCGGGHHH-HHHGGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEESTTC-CSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CCChHHHHH-HHHHhhCCCcEEECCCCcccHHHHHHHHHhCCCCEEeCCCC-CCHHHHHHHHHcCCCCEEEECchh
Confidence 344443333 35677788888988777665666777777888999998432 1223445555 357887775433
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=20.04 E-value=3.9e+02 Score=22.45 Aligned_cols=36 Identities=6% Similarity=-0.005 Sum_probs=25.9
Q ss_pred hhhcCCcEEEEecCCCHHHHHHHHHHHHhCCCCEEEe
Q 036840 97 HHISSASVLMVDANLSPPALAASCKIAAECNIPVWFE 133 (327)
Q Consensus 97 ~~l~~~~~v~~~g~~~~~~~~~l~~~a~~~~~~v~~d 133 (327)
+.++++|+|+.... +.+....+.+.+++.+++++.-
T Consensus 117 ~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 117 ALIAEHDLVLDCTD-NVAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHTSSEEEECCS-SHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhCCCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 45678999886543 4566777788888888886653
Done!