BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036841
(412 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 163/421 (38%), Gaps = 50/421 (11%)
Query: 7 VGEWWKQDVTE----VRNELLRTGGLP-------------AASDAFTINGQPGDLYPCSS 49
+ +WW Q + + + ++ +R G P + + + N +P L S
Sbjct: 141 LSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSES 200
Query: 50 SETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQ 109
+ V KTY +RI + L F+I NH L VV DG Y P TS I I G+
Sbjct: 201 CAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGE 260
Query: 110 TLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGN-YTXXXXXXXXXXXX 168
+ VL+ +QNP+ Y S N +L Y N +
Sbjct: 261 SYSVLITTDQNPSENYWVS----VGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPA 316
Query: 169 RNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRL 228
+D + + F + + P P+ IF + N + NG +
Sbjct: 317 WDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLLNTQNVI------------NG-YV 360
Query: 229 AASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTAD-DLPTILQIPEQGT 287
++N+ S P P L A + + +N P P +F D D P + G
Sbjct: 361 KWAINDVSLALP-PTPYLGAMKYNLLHAFDQNPP---PEVFPEDYDIDTPPTNEKTRIGN 416
Query: 288 EVKVLDYDSAVEINFQGTNLVA---GTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLI 344
V V++ Q N++ +HP HLHG+ E++ + NL
Sbjct: 417 GVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEES-SLNLK 475
Query: 345 DPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVF---IVKNGESPQER 401
+PPLR V + GW +RF A NPGVW HCH E HL GM VF + K G P +
Sbjct: 476 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKA 535
Query: 402 L 402
L
Sbjct: 536 L 536
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 150/367 (40%), Gaps = 66/367 (17%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +D+ ING G +++ ++V +GK Y R+++ + D FSI +H LTV
Sbjct: 162 FPKGADSTLINGL-GRSTSTPTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTV 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM-ASSVYSTVVNLDFINNTTAT 146
+ DG T P+T I I Q +L ANQ+ + Y++ A+ + T D +N +
Sbjct: 221 IEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDNYWIRANPNFGTTGFADGVN----S 276
Query: 147 AVLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTV 206
A+L+Y+ N T + L L + + VP + T
Sbjct: 277 AILRYD--------DADPVEPVTNQTGTTLLLETDLHPLTS----MPVPGNPTQ---GGA 321
Query: 207 SLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPP 266
LN N +GT +N +SF P+ +L+ + G N
Sbjct: 322 DLNL-------NMAFNFDGTNFF--INGESFTPPTVPVLLQI-------ISGAN------ 359
Query: 267 YLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXX 326
TA DL +P V L +S++EI F T G HP HLHG+
Sbjct: 360 -----TAQDL-----LPSG--SVYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAVV- 406
Query: 327 XXXXXXDEEKDPLNYNLIDPPLRTIVD--VPISG-WATVRFRASNPGVWFMHCHREEHLT 383
+YN DP R +V P +G T+RF+ NPG WF+HCH + HL
Sbjct: 407 -------RSAGSTSYNYDDPVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLD 459
Query: 384 WGMKTVF 390
G V
Sbjct: 460 AGFAVVM 466
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 142/363 (39%), Gaps = 72/363 (19%)
Query: 33 DAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDG 92
D ING + S+ + ++V GK Y RI++ + FSI H +TV+ DG
Sbjct: 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDG 251
Query: 93 AYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYN 152
PLT +TI GQ V+++ANQ Y++ ++ + + +A+ +Y
Sbjct: 252 VSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSN---GRNGFTGGINSAIFRYQ 308
Query: 153 GNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLP 212
G N+ N L L N P N +P
Sbjct: 309 GAAVAEPTTSQNSGTALNEAN--------LIPLINPGAP----------------GNPVP 344
Query: 213 CENDNNSCE--GPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFN 270
D N G N T ++N F+ P+ +L+ ++GV N
Sbjct: 345 GGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQI----LSGVTNPN---------- 390
Query: 271 FTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXXXXXX 330
D LP G V L + +EI+ G G +HP HLHG++
Sbjct: 391 ---DLLP--------GGAVISLPANQVIEISIPG-----GGNHPFHLHGHNF-------- 426
Query: 331 XXDEEKDPLN--YNLIDPPLRTIVDVPISG-WATVRFRASNPGVWFMHCHREEHLTWGMK 387
D + P + YN ++P R +V + G T RF NPG WF+HCH + HL G+
Sbjct: 427 --DVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLA 484
Query: 388 TVF 390
VF
Sbjct: 485 VVF 487
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 145/375 (38%), Gaps = 85/375 (22%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P SD+ ING G + S+ + V +GK Y R+++ + D FSI NH +T+
Sbjct: 162 FPFGSDSTLINGL-GRTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM-ASSVYSTVVNLDFINNTTAT 146
+ D T PL I I Q +L A+Q + Y++ A+ + IN +
Sbjct: 221 IEADSINTQPLEVDSIQIFAAQRYSFVLDASQPVDNYWIRANPAFGNTGFAGGIN----S 276
Query: 147 AVLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSI---- 202
A+L+Y+G A E P V T +
Sbjct: 277 AILRYDG--------------------------------APEIEPTSVQTTPTKPLNEVD 304
Query: 203 FSTVSLNTLPCENDNNSCEGP-------NGTRLAASLNNQSFVEPSPIAILEAYYERING 255
+S +P + + P NGT +N+ +FV PS +L+ ++G
Sbjct: 305 LHPLSPMPVPGSPEPGGVDKPLNLVFNFNGTNFF--INDHTFVPPSVPVLLQI----LSG 358
Query: 256 VYGENFPDFPPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPI 315
A DL +PE V VL +S++EI+F T G HP
Sbjct: 359 AQA--------------AQDL-----VPE--GSVFVLPSNSSIEISFPATANAPGFPHPF 397
Query: 316 HLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRASNPGVWFM 374
HLHG++ YN +P R +V G T+RF +NPG WF+
Sbjct: 398 HLHGHAFAVVRSAGSSV--------YNYDNPIFRDVVSTGQPGDNVTIRFETNNPGPWFL 449
Query: 375 HCHREEHLTWGMKTV 389
HCH + HL G V
Sbjct: 450 HCHIDFHLDAGFAVV 464
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 137/380 (36%), Gaps = 91/380 (23%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +DA ING G ++ + V GK Y R+++ + D FSI H+LTV
Sbjct: 162 FPLGADATLINGL-GRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTV 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ DG + PL I I A+ YS V+N N T
Sbjct: 221 IEVDGINSQPLLVDSIQI--------------------FAAQRYSFVLNA---NQTVGNY 257
Query: 148 VLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRS--LANEDHPIDVPLDI-TSSIFS 204
++ N N+ F G + S L + P+ P T+S+
Sbjct: 258 WIRANPNF------------------GTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIP 299
Query: 205 TVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDF 264
+ N P R+ P+P + +A N G NF
Sbjct: 300 LIETNLHPL------------ARMPVP------GSPTPGGVDKALNLAFN-FNGTNF--- 337
Query: 265 PPYLFN--FTADDLPTILQIPEQGT---------EVKVLDYDSAVEINFQGTNLVAGTSH 313
++ N FT +P +LQI V L S +EI T L G H
Sbjct: 338 --FINNASFTPPTVPVLLQILSGAQTAQDLLPAGSVYPLPAHSTIEITLPATALAPGAPH 395
Query: 314 PIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDV--PISG-WATVRFRASNPG 370
P HLHG++ YN DP R +V P +G T+RF+ NPG
Sbjct: 396 PFHLHGHAFAVV--------RSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPG 447
Query: 371 VWFMHCHREEHLTWGMKTVF 390
WF+HCH + HL G VF
Sbjct: 448 PWFLHCHIDFHLEAGFAIVF 467
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 147/372 (39%), Gaps = 70/372 (18%)
Query: 27 GLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLT 86
P +D+ ING G ++S+ +TV++ K Y R+++ + D FSI H++T
Sbjct: 161 AFPPNADSVLINGL-GRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMT 219
Query: 87 VVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTA- 145
++ DG PL I I Q +L A Q+ + Y++ + + N I+ T
Sbjct: 220 IIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVDNYWIRA-----IPNTGTIDTTGGL 274
Query: 146 -TAVLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFS 204
+A+L+Y+G N T S + + + P+D P +
Sbjct: 275 NSAILRYSG--------ADIVDPTANATTSVIPLVET------DLVPLDSPAAPGDPVVG 320
Query: 205 TVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDF 264
V L N + S G N +NN++ + P+ +L+ ++G
Sbjct: 321 GVDL----AMNLDFSFNGTN-----FFINNETLIPPTVPVLLQI----LSGAQSA----- 362
Query: 265 PPYLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINF-----QGTNLVAGTSHPIHLHG 319
+D LPT V L +S +E++F G G HP HLHG
Sbjct: 363 --------SDLLPT--------GSVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHG 406
Query: 320 YSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRASNPGVWFMHCHR 378
++ +YN ++P R V G T+RF N G WF+HCH
Sbjct: 407 HAFSVVRSAGSS--------DYNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHI 458
Query: 379 EEHLTWGMKTVF 390
+ HL G VF
Sbjct: 459 DFHLEAGFAIVF 470
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 131/346 (37%), Gaps = 79/346 (22%)
Query: 55 LTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVL 114
+TV+ GK Y +R+++ + D FSI HD+T++ TDG + LT I I Q +
Sbjct: 191 ITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFV 250
Query: 115 LQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTXXXXXXXXXXXXRNDTNS 174
L ANQ Y++ ++ S D N +A+L+Y+G T D +
Sbjct: 251 LNANQPVGNYWIRANPNSGGEGFDGGIN---SAILRYDGATTA-------------DPVT 294
Query: 175 AFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASL-- 232
+ + + + HP+ S N +P N +G L SL
Sbjct: 295 VASTVHTKCLIETDLHPL--------------SRNGVP----GNPHQGGADCNLNLSLGF 336
Query: 233 -------NNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQ 285
N SF P+ +L+ N AD LP+
Sbjct: 337 ACGNFVINGVSFTPPTVPVLLQICSGA-----------------NTAADLLPS------- 372
Query: 286 GTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLID 345
V L +S +EI AG HP HLHG+ E N D
Sbjct: 373 -GSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVS--------ESASNSTSNYDD 421
Query: 346 PPLRTIVDV-PISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVF 390
P R +V + + T+RF NPG WF+HCH + HL G VF
Sbjct: 422 PIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 138/355 (38%), Gaps = 53/355 (14%)
Query: 48 SSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISP 107
+ + + +T+ GK + LRIIN + D S+ H++TV+ TD N T S + ++
Sbjct: 251 GAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAV 310
Query: 108 GQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTXXXXXXXXXXX 167
GQ DV + AN Y+ + + NN A+ +Y G
Sbjct: 311 GQRYDVTIDANSPVGNYWFNVTFGDGLCGSS--NNKFPAAIFRYQG-------------- 354
Query: 168 XRNDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTR 227
A + + + L +H L++T + + +N N + P+ T
Sbjct: 355 -------APATLPTDQGLPVPNHMCLDNLNLTPVVTRSAPVN--------NFVKRPSNT- 398
Query: 228 LAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQGT 287
L +L+ + +P+ + + IN +G+ D Y+ + T + +
Sbjct: 399 LGVTLD----IGGTPLFVWKVNGSAINVDWGKPILD---YVMSGN-----TSYPVSDNIV 446
Query: 288 EVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXX---------XXXXXXXXDEEKDP 338
+V +D + I TN + HP+HLHG+ D KD
Sbjct: 447 QVDAVDQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDL 506
Query: 339 LNYNLIDPPLRTIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVK 393
+P R + +P GW + F+ NPG W HCH H++ G+ F+ +
Sbjct: 507 PRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDFLER 561
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 151/367 (41%), Gaps = 65/367 (17%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +DA ING+ G S +E + V +GK Y R+++ + + FSI H+LT+
Sbjct: 162 FPGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ D + PL I I Q +L ANQ + Y++ ++ V D +A
Sbjct: 221 IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFD---GGINSA 277
Query: 148 VLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSLRSLANED-HPIDVPLDITSSIFSTV 206
+L+Y+G N T S++ L D HP+ +++ + +
Sbjct: 278 ILRYDG--------APAVEPTTNQTT-------SVKPLNEVDLHPL-----VSTPVPGSP 317
Query: 207 SLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPP 266
S + + N NG+ +N SFV P+ +L+ ++G
Sbjct: 318 SSGGV--DKAINMAFNFNGSNFF--INGASFVPPTVPVLLQI----LSGAQ--------- 360
Query: 267 YLFNFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXX 326
TA DL +P V L ++++EI+F T G HP HLHG++
Sbjct: 361 -----TAQDL-----LPSGSVYV--LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVR 408
Query: 327 XXXXXXDEEKDPLNYNLIDPPLRTIVD--VPISG-WATVRFRASNPGVWFMHCHREEHLT 383
YN +P R +V P +G T+RF +NPG WF+HCH + HL
Sbjct: 409 SAGSTV--------YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLE 460
Query: 384 WGMKTVF 390
G V
Sbjct: 461 GGFAVVM 467
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 310 GTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNP 369
G HPIHLHG+ + ++ P +NL++PP R + +P +G+ + F+ NP
Sbjct: 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP 519
Query: 370 GVWFMHCHREEHLTWGMKTVFI 391
G W +HCH H + GM F+
Sbjct: 520 GSWLLHCHIAWHASEGMAMQFV 541
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 9 EWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSS---------ETFTLTVDE 59
+W + V E+ + R G PA + +NG + + CS+S + F LT E
Sbjct: 204 DWAHESVFEIW-DTARLGAPPALENTL-MNGT--NTFDCSASTDPNCVGGGKKFELTFVE 259
Query: 60 GKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQ 119
G Y LR+IN +D F+I NH LTV+ D P TT + I GQ DV+++AN
Sbjct: 260 GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA 319
Query: 120 NPNLYYMASSVYSTVVNLDFINNTTATAVLQYN 152
+ Y++ + +T + N AT +L+Y+
Sbjct: 320 AADNYWIRGNWGTTCSTNNEAAN--ATGILRYD 350
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 138/378 (36%), Gaps = 81/378 (21%)
Query: 24 RTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANH 83
+ G +DA ING G +++ +TV +GK Y R+++ + D FSI H
Sbjct: 157 KVGSPVPTADATLINGL-GRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGH 215
Query: 84 DLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNT 143
LTV+ D P T I I A+ YS V+N D
Sbjct: 216 SLTVIEADSVNLKPQTVDSIQI--------------------FAAQRYSFVLNAD----- 250
Query: 144 TATAVLQYNGNYTXXXXXXXXXXXXRNDTNSA-FQFIGSLRSLANEDHPIDVPLDITSSI 202
Q GNY NSA ++ G+ P++ T+S
Sbjct: 251 ------QDVGNYWIRALPNSGTRNFDGGVNSAILRYDGA------------APVEPTTS- 291
Query: 203 FSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFP 262
T S N L E+ + EG T S P+P + A +N +G
Sbjct: 292 -QTPSTNPL-VESALTTLEG---TAAPGS--------PAPGGVDLA----LNMAFGFAGG 334
Query: 263 DFPPYLFNFTADDLPTILQIPEQGTE---------VKVLDYDSAVEINFQGTNLVAGTSH 313
F +FT +P +LQI V L ++ +EI+ T G H
Sbjct: 335 KFTINGASFTPPTVPVLLQILSGAQSAQDLLPSGSVYSLPANADIEISLPATAAAPGFPH 394
Query: 314 PIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRASNPGVW 372
P HLHG++ YN +P R +V G T+RFR NPG W
Sbjct: 395 PFHLHGHTFAVVRSAGSS--------TYNYENPVYRDVVSTGSPGDNVTIRFRTDNPGPW 446
Query: 373 FMHCHREEHLTWGMKTVF 390
F+HCH + HL G V
Sbjct: 447 FLHCHIDFHLEAGFAVVM 464
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 310 GTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNP 369
G HPIHLHG+ + ++ P +NL++PP R + +P +G+ + F+ NP
Sbjct: 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP 519
Query: 370 GVWFMHCHREEHLTWGMKTVFI 391
G W +HCH H + G+ F+
Sbjct: 520 GSWLLHCHIAWHASEGLAMQFV 541
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 9 EWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSS---------ETFTLTVDE 59
+W + V E+ + R G PA + +NG + + CS+S + F LT E
Sbjct: 204 DWAHESVFEIW-DTARLGAPPALENTL-MNGT--NTFDCSASTDPNCVGGGKKFELTFVE 259
Query: 60 GKTYLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQ 119
G Y LR+IN +D F+I NH LTV+ D P TT + I GQ DV+++AN
Sbjct: 260 GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA 319
Query: 120 NPNLYYMASSVYSTVVNLDFINNTTATAVLQYN 152
+ Y++ + +T + N AT +L+Y+
Sbjct: 320 AADNYWIRGNWGTTCSTNNEAAN--ATGILRYD 350
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 139/378 (36%), Gaps = 81/378 (21%)
Query: 24 RTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANH 83
+ G +DA ING G +++ +TV +GK Y R+++ + D FSI H
Sbjct: 157 KVGAPVPTADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGH 215
Query: 84 DLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNT 143
LTV+ D P T+D +L A+ YS V+N D
Sbjct: 216 SLTVIEADSVNLKP-----------HTVD---------SLQIFAAQRYSFVLNAD----- 250
Query: 144 TATAVLQYNGNYTXXXXXXXXXXXXRNDTNSA-FQFIGSLRSLANEDHPIDVPLDITSSI 202
Q NY TNSA ++ G+ P++ T+S
Sbjct: 251 ------QDVDNYWIRALPNSGTQNFAGGTNSAILRYDGA------------APVEPTTS- 291
Query: 203 FSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFP 262
T S N L E+ + +G + P+P + A +N +G
Sbjct: 292 -QTPSTNPL-VESALTTLKG-----------TAAPGSPTPGGVDLA----LNMAFGFAGG 334
Query: 263 DFPPYLFNFTADDLPTILQIPEQGTE---------VKVLDYDSAVEINFQGTNLVAGTSH 313
+F +FT +P +LQI V L ++ +EI+ T G H
Sbjct: 335 NFTINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANADIEISLPATAAAPGFPH 394
Query: 314 PIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRASNPGVW 372
P HLHG+ YN +P R +V G T+RFR NPG W
Sbjct: 395 PFHLHGHVFAVVRSAGSS--------TYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPW 446
Query: 373 FMHCHREEHLTWGMKTVF 390
F+HCH + HL G V
Sbjct: 447 FLHCHIDFHLEAGFAVVM 464
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 139/378 (36%), Gaps = 81/378 (21%)
Query: 24 RTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANH 83
+ G +DA ING G +++ +TV +GK Y R+++ + D FSI H
Sbjct: 157 KVGAPVPTADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGH 215
Query: 84 DLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNT 143
LTV+ D P T+D +L A+ YS V+N D
Sbjct: 216 SLTVIEADSVNLKP-----------HTVD---------SLQIFAAQRYSFVLNAD----- 250
Query: 144 TATAVLQYNGNYTXXXXXXXXXXXXRNDTNSA-FQFIGSLRSLANEDHPIDVPLDITSSI 202
Q NY TNSA ++ G+ P++ T+S
Sbjct: 251 ------QDVDNYWIRALPNSGTQNFAGGTNSAILRYDGA------------APVEPTTS- 291
Query: 203 FSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFP 262
T S N L E+ + +G + P+P + A +N +G
Sbjct: 292 -QTPSTNPL-VESALTTLKG-----------TAAPGSPTPGGVDLA----LNMAFGFAGG 334
Query: 263 DFPPYLFNFTADDLPTILQIPEQGTE---------VKVLDYDSAVEINFQGTNLVAGTSH 313
+F +FT +P +LQI V L ++ +EI+ T G H
Sbjct: 335 NFTINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANADIEISLPATAAAPGFPH 394
Query: 314 PIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRASNPGVW 372
P HLHG+ YN +P R +V G T+RFR NPG W
Sbjct: 395 PFHLHGHVFAVVRSAGSS--------TYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPW 446
Query: 373 FMHCHREEHLTWGMKTVF 390
F+HCH + HL G V
Sbjct: 447 FLHCHIDFHLEAGFAVVM 464
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 289 VKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPL 348
V L D+ +EI+F T+ AG HP HLHG++ YN DP
Sbjct: 371 VYSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVV--------RSAGSTTYNYNDPIF 422
Query: 349 RTIVDVPISGW---ATVRFRASNPGVWFMHCHREEHLTWGMKTVF 390
R V T+RF+ +NPG WF+HCH + HL G VF
Sbjct: 423 RDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 29 PAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVV 88
P +DA INGQ G S++ ++V GK Y R+++ + D FSI H +T++
Sbjct: 163 PGGADATLINGQ-GRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTII 221
Query: 89 GTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATAV 148
D PL I I Q +L ANQ N Y++ ++ N+ F N +A+
Sbjct: 222 QVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNYWIRANPNQG--NVGFTNGIN-SAI 278
Query: 149 LQYNG 153
L+Y+G
Sbjct: 279 LRYSG 283
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 143/401 (35%), Gaps = 97/401 (24%)
Query: 7 VGEWWKQDVTEVRNELLR----TGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKT 62
+ EW+ VT++ + TG P + N + T V T
Sbjct: 139 LSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNN-----------TMNLTWEVQPDTT 187
Query: 63 YLLRIINAAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPN 122
YLLRI+N +F I +H++TVV DG T T + I+ Q VL+
Sbjct: 188 YLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHT----- 242
Query: 123 LYYMASSVYSTVVNLDFINNTTATAVLQYNGNYTXXXXXXXXXXXXRNDTNSAFQFIGSL 182
+NDT+ F +
Sbjct: 243 ----------------------------------------------KNDTDKNFAIMQKF 256
Query: 183 RSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEG-PNGTRLAASLNNQSFVEPS 241
+ P D+ L+ TS + + LP +N +S + + L + EP
Sbjct: 257 DDTMLDVIPSDLQLNATSYMVYNKTA-ALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPD 315
Query: 242 PIAILEAYYERINGVYGENFPDFPPYLFNFTADDLPTILQIPEQG------------TEV 289
+ ++ + + G N+ F +TA +PT++ + G T
Sbjct: 316 HVITVDVVMDNLKN--GVNYAFFNN--ITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHT 371
Query: 290 KVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSXXXXXXXXXXXD------EEKDPLNYNL 343
+L+ D VEI N GT HP HLHG++ D DP N+
Sbjct: 372 FILEKDEIVEIVLN--NQDTGT-HPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA 428
Query: 344 I-DPPLR--TIVDVPISGWATVRFRASNPGVWFMHCHREEH 381
+ P+R T+ P S + +RF+A NPGVWF HCH E H
Sbjct: 429 FPEYPMRRDTLYVRPQSNFV-IRFKADNPGVWFFHCHIEWH 468
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 308 VAGTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRA 366
V G HP HLHG++ YN ++P R +V + ++G T+RF
Sbjct: 391 VLGGPHPFHLHGHAFSVVRSAGSST--------YNFVNPVKRDVVSLGVTGDEVTIRFVT 442
Query: 367 SNPGVWFMHCHREEHLTWGMKTVF 390
NPG WF HCH E HL G+ VF
Sbjct: 443 DNPGPWFFHCHIEFHLMNGLAIVF 466
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 30 AASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVG 89
A DA ING+ G ++E + V++GK Y +R+I+ + D FSI H+LT++
Sbjct: 163 AQPDATLINGK-GRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE 221
Query: 90 TDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNL-DFINNTTATAV 148
DG T P T + I GQ +L ANQ + Y++ + L N +A+
Sbjct: 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAI 281
Query: 149 LQYNG 153
L+Y G
Sbjct: 282 LRYAG 286
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 308 VAGTSHPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISG-WATVRFRA 366
V G HP HLHG++ YN ++P R +V + ++G T+RF
Sbjct: 391 VLGGPHPFHLHGHAFSVVRSAGSST--------YNFVNPVKRDVVSLGVTGDEVTIRFVT 442
Query: 367 SNPGVWFMHCHREEHLTWGMKTVF 390
NPG WF HCH E HL G+ VF
Sbjct: 443 DNPGPWFFHCHIEFHLMNGLAIVF 466
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 30 AASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTVVG 89
A DA ING+ G ++E + V++GK Y +R+I+ + D FSI H+LT++
Sbjct: 163 AQPDATLINGK-GRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE 221
Query: 90 TDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNL-DFINNTTATAV 148
DG T P T + I GQ +L ANQ + Y++ + L N +A+
Sbjct: 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAI 281
Query: 149 LQYNG 153
L+Y G
Sbjct: 282 LRYAG 286
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
PA +DA ING+ G +S+E + V +GK R+++ + D FSI H+LT+
Sbjct: 162 FPAGADATLINGK-GRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ D + + PL+ I I Q +L ANQ + Y++ ++ N+ F N +A
Sbjct: 221 IEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNYWIRAN--PNFGNVGF-NGGINSA 277
Query: 148 VLQYNG 153
+L+Y+G
Sbjct: 278 ILRYDG 283
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 270 NFTADDLPTILQIPEQGT---------EVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGY 320
+F +P +LQI V VL ++++EI+F T G HP HLHG+
Sbjct: 343 SFVPPSVPVLLQILSGAQTAQDLLPSGSVXVLPSNASIEISFPATAAAPGAPHPFHLHGH 402
Query: 321 SXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDV--PISG-WATVRFRASNPGVWFMHCH 377
+ YN +P R +V P +G T+RF +NPG WF+HCH
Sbjct: 403 TFAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCH 454
Query: 378 REEHLTWGMKTV 389
+ HL G V
Sbjct: 455 IDFHLEGGFAVV 466
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +DA ING+ G ++++ ++V GK Y R+++ + D FSI H++T+
Sbjct: 162 FPLGADATLINGK-GRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ TD T PL I I Q +L+ANQ + Y++ ++ N+ F +A
Sbjct: 221 IETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDNYWIRAN--PNFGNVGFTGGIN-SA 277
Query: 148 VLQYNG 153
+L+Y+G
Sbjct: 278 ILRYDG 283
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 270 NFTADDLPTILQIPEQGT---------EVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGY 320
+FT +P +LQI V L ++ +EI+F T G HP HLHG+
Sbjct: 343 SFTPPTVPVLLQIISGAQNAQDLLPSGSVYSLPSNADIEISFPATAAAPGAPHPFHLHGH 402
Query: 321 SXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDV--PISG-WATVRFRASNPGVWFMHCH 377
+ YN +P R +V P +G T+RFR NPG WF+HCH
Sbjct: 403 AFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCH 454
Query: 378 REEHLTWGMKTVF 390
+ HL G VF
Sbjct: 455 IDFHLEAGFAVVF 467
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 313 HPIHLHGYS---------XXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVR 363
HP+HLHG+ D D N +PP R +P GW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 364 FRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQE 400
FR NPG W HCH H++ G+ F+ + + Q
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQR 527
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 29 PAASDAFTINGQPGDLYPCSSSETFT-LTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P SD ING + P + + +T+ GK + LRI+N + + S+ NH +TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM 126
+ D N +T + ++ GQ DV++ A++ P+ Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 313 HPIHLHGYS---------XXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVR 363
HP+HLHG+ D D N +PP R +P GW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 364 FRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQE 400
FR NPG W HCH H++ G+ F+ + + Q
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQR 527
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 29 PAASDAFTINGQPGDLYPCSSSETFT-LTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P SD ING + P + + +T+ GK + LRI+N + + S+ NH +TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM 126
+ D N +T + ++ GQ DV++ A++ P+ Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 313 HPIHLHGYS---------XXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVR 363
HP+HLHG+ D D N +PP R +P GW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 364 FRASNPGVWFMHCHREEHLTWGMKTVFIVKNGESPQE 400
FR NPG W HCH H++ G+ F+ + + Q
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQR 527
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 29 PAASDAFTINGQPGDLYPCSSSETFT-LTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P SD ING + P + + +T+ GK + LRI+N + + S+ NH +TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYM 126
+ D N +T + ++ GQ DV++ A++ P+ Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +DA ING+ G S +E + V +GK Y R+++ + + FSI H+LT+
Sbjct: 162 FPGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ D + PL I I Q +L ANQ + Y++ ++ V D +A
Sbjct: 221 IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFD---GGINSA 277
Query: 148 VLQYNG 153
+L+Y+G
Sbjct: 278 ILRYDG 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 270 NFTADDLPTILQIPEQGT---------EVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGY 320
+F +P +LQI V VL ++++EI+F T G HP HLHG+
Sbjct: 343 SFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402
Query: 321 SXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDV--PISG-WATVRFRASNPGVWFMHCH 377
+ YN +P R +V P +G T+RF +NPG WF+HCH
Sbjct: 403 TFAVVRSAGSTV--------YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCH 454
Query: 378 REEHLTWGMKTVF 390
+ HL G V
Sbjct: 455 IDFHLEGGFAVVM 467
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 28 LPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEMLFFSIANHDLTV 87
P +D+ ING+ G SS++ ++V +GK R+++ + D FSI H+ T+
Sbjct: 162 FPNGADSTLINGK-GRAPSDSSAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTI 220
Query: 88 VGTDGAYTNPLTTSYITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+ TD + PL T I I Q L ANQ + Y++ ++ N+ F N +A
Sbjct: 221 IETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDNYWIRAN--PNFGNVGF-NGGINSA 277
Query: 148 VLQYNG 153
+L+Y+G
Sbjct: 278 ILRYDG 283
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 271 FTADDLPTILQIPEQGT---------EVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYS 321
FT +P +LQI V L ++++EI+F T G HP HLHG+
Sbjct: 344 FTPPSVPVLLQILSGAQTAQDLLPSGSVXTLPSNASIEISFPATAAAPGAPHPFHLHGHV 403
Query: 322 XXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDV--PISG-WATVRFRASNPGVWFMHCHR 378
YN +P R +V P +G T+RF +NPG WF+HCH
Sbjct: 404 FAVVRSAGSTV--------YNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHI 455
Query: 379 EEHLTWGMKTV 389
+ HL G V
Sbjct: 456 DFHLEGGFAVV 466
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 18 VRNELLRTGGLPAASDAFT-INGQPGDLYPCSSSETFTLTVDEGKTYLLRIINAAMDEML 76
V +L GG PA +NG+ GDL + + TL V + T LR++NA+
Sbjct: 152 VLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALRPTL-VAQKATLRLRLLNASNARYY 210
Query: 77 FFSIANHDLTVVGTDGAY-TNPLTTSYITISPGQTLDVLLQANQN 120
++ +H L ++ DG + PL S + ++PG+ +VL++ +
Sbjct: 211 RLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKE 255
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 17/84 (20%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H +H HG+S D + D+ + T+ PG+W
Sbjct: 975 HTVHFHGHSFQYKHRGVYSSD-----------------VFDIFPGTYQTLEMFPRTPGIW 1017
Query: 373 FMHCHREEHLTWGMKTVFIVKNGE 396
+HCH +H+ GM+T + V E
Sbjct: 1018 LLHCHVTDHIHAGMETTYTVLQNE 1041
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 366 ASNPGVWFMHCHREEHLTWGMKTVFIVK 393
A NPG W + C HL G++ F V+
Sbjct: 309 AQNPGEWMLSCQNLNHLKAGLQAFFQVQ 336
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 17/84 (20%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H +H HG+S D + D+ + T+ PG+W
Sbjct: 994 HTVHFHGHSFQYKHRGVYSSD-----------------VFDIFPGTYQTLEMFPRTPGIW 1036
Query: 373 FMHCHREEHLTWGMKTVFIVKNGE 396
+HCH +H+ GM+T + V E
Sbjct: 1037 LLHCHVTDHIHAGMETTYTVLQNE 1060
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 366 ASNPGVWFMHCHREEHLTWGMKTVFIVK 393
A NPG W + C HL G++ F V+
Sbjct: 328 AQNPGEWMLSCQNLNHLKAGLQAFFQVQ 355
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDP-PLRTIVDV--PIS-GWATVRFRASN 368
H HLHG+ + + + + DP PL I D+ +S G+ +
Sbjct: 212 HTFHLHGHRWL----------DNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVG 261
Query: 369 PGVWFMHCHREEHLTWGMKTVFIVKNGES 397
PG+W HCH + H GM +F+V+N +
Sbjct: 262 PGMWMYHCHVQNHSDMGMAGMFLVRNADG 290
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H H+HG+ ++ + N I P + G+ + G W
Sbjct: 231 HTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSF------GFQIIAGEGVGAGAW 284
Query: 373 FMHCHREEHLTWGMKTVFIVKN 394
HCH + H GM +F+VK
Sbjct: 285 MYHCHVQSHSDMGMVGLFLVKK 306
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H HLHG+ ++ + N I P + G+ + G W
Sbjct: 196 HTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSF------GFQVIAGEGVGAGAW 249
Query: 373 FMHCHREEHLTWGMKTVFIVKN 394
HCH + H GM +F+VK
Sbjct: 250 MYHCHVQSHSDMGMVGLFLVKK 271
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H H+HG+ ++ + N I P + G+ + G W
Sbjct: 193 HTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSF------GFQIIAGEGVGAGAW 246
Query: 373 FMHCHREEHLTWGMKTVFIVKN 394
HCH + H GM +F+VK
Sbjct: 247 MYHCHVQSHSDMGMVGLFLVKK 268
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H H+HG+ ++ + N I P + G+ + G W
Sbjct: 194 HTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSF------GFQIIAGEGVGAGAW 247
Query: 373 FMHCHREEHLTWGMKTVFIVKN 394
HCH + H GM +F+VK
Sbjct: 248 MYHCHVQSHSDMGMVGLFLVKK 269
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 313 HPIHLHGYSXXXXXXXXXXXDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNPGVW 372
H H+HG+ ++ + N I P + G+ + G W
Sbjct: 190 HTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSF------GFQIIAGEGVGAGAW 243
Query: 373 FMHCHREEHLTWGMKTVFIVKN 394
HCH + H GM +F+VK
Sbjct: 244 MYHCHVQSHSDMGMVGLFLVKK 265
>pdb|1KCB|A Chain A, Crystal Structure Of A No-Forming Nitrite Reductase
Mutant: An Analog Of A Transition State In Enzymatic
Reaction
Length = 340
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 361 TVRFRASNPGVWFMHCHREE----HLTWGMKTVFIV 392
T+RF+A+ PGV+ HC E H+T GM +V
Sbjct: 121 TLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1NIB|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|B Chain B, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIB|C Chain C, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|A Chain A, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|B Chain B, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIA|C Chain C, The Structure Of Cu-nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2BW4|A Chain A, Atomic Resolution Structure Of Resting State Of The
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|2BW5|A Chain A, Atomic Resolution Structure Of No-Bound Achromobacter
Cycloclastes Cu Nitrite Reductase
pdb|2BWD|A Chain A, Atomic Resolution Structure Of Achromobacter Cycloclastes
Cu Nitrite Reductase With Endogenously Bound Nitrite And
No
pdb|2BWI|A Chain A, Atomic Resolution Structure Of Nitrite -Soaked
Achromobacter Cycloclastes Cu Nitrite Reductase
pdb|1NIC|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NID|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIE|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|1NIF|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2NRD|A Chain A, The Structure Of Cu-Nitrite Reductase From Achromobacter
Cycloclastes At Five Ph Values, With Nitrite Bound And
With Type Ii Cu Depleted
pdb|2Y1A|A Chain A, Crystal Structure Of Achromobacter Cycloclastes Cu Nitrite
Reductase With Bound No
Length = 340
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 361 TVRFRASNPGVWFMHCHREE----HLTWGMKTVFIV 392
T+RF+A+ PGV+ HC E H+T GM +V
Sbjct: 121 TLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|1RZP|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZP|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph6.2
pdb|1RZQ|A Chain A, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|B Chain B, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
pdb|1RZQ|C Chain C, Crystal Structure Of C-Terminal Despentapeptide Nitrite
Reductase From Achromobacter Cycloclastes At Ph5.0
Length = 335
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 361 TVRFRASNPGVWFMHCHREE----HLTWGMKTVFIV 392
T+RF+A+ PGV+ HC E H+T GM +V
Sbjct: 121 TLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|2AVF|A Chain A, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|B Chain B, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|C Chain C, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|D Chain D, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|E Chain E, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
pdb|2AVF|F Chain F, Crystal Structure Of C-Terminal Desundecapeptide Nitrite
Reductase From Achromobacter Cycloclastes
Length = 329
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 361 TVRFRASNPGVWFMHCHREE----HLTWGMKTVFIV 392
T+RF+A+ PGV+ HC E H+T GM +V
Sbjct: 121 TLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 156
>pdb|3CDZ|B Chain B, Crystal Structure Of Human Factor Viii
Length = 684
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 361 TVRFRASNPGVWFMHCHREEHLTWGMKTVFIV 392
TV S G+W + C EHL GM T+F+V
Sbjct: 337 TVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 368
>pdb|2R7E|B Chain B, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 770
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 361 TVRFRASNPGVWFMHCHREEHLTWGMKTVFIV 392
TV S G+W + C EHL GM T+F+V
Sbjct: 423 TVEMLPSKAGIWRVECLIGEHLHAGMSTLFLV 454
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 360 ATVRFRASNPGVWFMHCHREE---HLTWGMKTVFIV--KNGESPQER 401
+T F+A NPG++ HC H+ GM + +V K G +P +R
Sbjct: 109 STFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAPVDR 155
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 350 TIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIV 392
T+ P SG TV NPG+W + CH + GM + V
Sbjct: 667 TLTLFPFSG-ETVFMSMENPGLWILGCHNSDFRNRGMTALLKV 708
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 350 TIVDVPISGWATVRFRASNPGVWFMHCHREEHLTWGMKTVFIVKN 394
T+ P SG TV NPG+W + CH + GM + V +
Sbjct: 668 TLTLFPFSG-ETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSS 711
>pdb|3HXZ|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Alasa
pdb|3HXZ|B Chain B, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Alasa
pdb|3HXZ|C Chain C, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Alasa
pdb|3HXZ|D Chain D, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Alasa
pdb|3HY0|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Glysa
pdb|3HY0|B Chain B, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Glysa
pdb|3HY1|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Sersa
pdb|3HY1|B Chain B, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
G237a In Complex With Sersa
Length = 441
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 9 EWWKQDVTEVRNELLRTG---GLPAASDAFTINGQPGDLYPCS 48
E W+++V R ++R G G P ASD F G G PC+
Sbjct: 140 EIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCT 182
>pdb|3HXU|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
In Complex With Alasa
pdb|3HXV|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
In Complex With Glysa
pdb|3HXW|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
In Complex With Sersa
pdb|3HXX|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
In Complex With Amppcp
pdb|3HXY|A Chain A, Crystal Structure Of Catalytic Fragment Of E. Coli Alars
In Complex With Amppcp, Ala-Amp And Pcp
Length = 441
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 9 EWWKQDVTEVRNELLRTG---GLPAASDAFTINGQPGDLYPCS 48
E W+++V R ++R G G P ASD F G G PC+
Sbjct: 140 EIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCT 182
>pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly249543
pdb|1DIA|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly249543
pdb|1DIB|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly345899
pdb|1DIB|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly345899
pdb|1DIG|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly374571
pdb|1DIG|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly374571
Length = 306
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 192 IDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYE 251
+ +PLD +SI + +N + E D + N RLA N F+ +P LE E
Sbjct: 99 VQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158
>pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE
pdb|1A4I|B Chain B, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE
Length = 301
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 192 IDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYE 251
+ +PLD +SI + +N + E D + N RLA N F+ +P LE E
Sbjct: 99 VQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158
>pdb|3M3V|A Chain A, Sars-Cov Main Protease Triple Mutant StiA WITH TWO
N-Terminal Additional Residue (Gly-Ser)
pdb|3M3V|B Chain B, Sars-Cov Main Protease Triple Mutant StiA WITH TWO
N-Terminal Additional Residue (Gly-Ser)
Length = 308
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTAT 146
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 96 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGS 149
>pdb|1WOF|A Chain A, Crystal Structure Of Sars-Cov Mpro In Complex With An
Inhibitor N1
pdb|1WOF|B Chain B, Crystal Structure Of Sars-Cov Mpro In Complex With An
Inhibitor N1
pdb|2AMD|A Chain A, Crystal Structure Of Sars_cov Mpro In Complex With An
Inhibitor N9
pdb|2AMD|B Chain B, Crystal Structure Of Sars_cov Mpro In Complex With An
Inhibitor N9
pdb|2AMQ|A Chain A, Crystal Structure Of Sars_cov Mpro In Complex With An
Inhibitor N3
pdb|2AMQ|B Chain B, Crystal Structure Of Sars_cov Mpro In Complex With An
Inhibitor N3
pdb|2D2D|A Chain A, Crystal Structure Of Sars-Cov Mpro In Complex With An
Inhibitor I2
pdb|2D2D|B Chain B, Crystal Structure Of Sars-Cov Mpro In Complex With An
Inhibitor I2
Length = 311
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 99 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSV 153
>pdb|3E91|A Chain A, Crystal Structure Of Sars-Cov Mpro Mutant In P21 At Ph6.9
pdb|3E91|B Chain B, Crystal Structure Of Sars-Cov Mpro Mutant In P21 At Ph6.9
pdb|3EA7|A Chain A, Crystal Structure Of Sars-Cov Main Protease Triple Mutant
StiA IN SPACE GROUP P21
pdb|3EA7|B Chain B, Crystal Structure Of Sars-Cov Main Protease Triple Mutant
StiA IN SPACE GROUP P21
pdb|3EA8|A Chain A, Crystal Structure Of Sars-Cov Main Protease Triple Mutant
StiA IN SPACE GROUP C2
Length = 306
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTAT 146
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 94 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGS 147
>pdb|2YY4|A Chain A, Crystal Structure Of Ms8104
pdb|2YY4|B Chain B, Crystal Structure Of Ms8104
Length = 316
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 94 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSAGSV 148
>pdb|3EA9|A Chain A, Crystal Structure Of Sars-Cov Main Protease Quadruple
Mutant StifA WITH ONE MOLECULE IN ONE ASYMMETRIC UNIT
pdb|3EAJ|A Chain A, Crystal Structure Of Sars-Cov Main Protease Quadruple
Mutant StifA WITH TWO MOLECULES IN ONE ASYMMETRIC UNIT
pdb|3EAJ|B Chain B, Crystal Structure Of Sars-Cov Main Protease Quadruple
Mutant StifA WITH TWO MOLECULES IN ONE ASYMMETRIC UNIT
Length = 306
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTAT 146
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 94 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGS 147
>pdb|1Q2W|A Chain A, X-Ray Crystal Structure Of The Sars Coronavirus Main
Protease
pdb|1Q2W|B Chain B, X-Ray Crystal Structure Of The Sars Coronavirus Main
Protease
Length = 308
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTATA 147
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 96 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSV 150
>pdb|2QC2|A Chain A, Crystal Structure Of Severe Acute Respiratory Syndrome
(Sars) 3c-Like Protease Asn214ala Mutant
pdb|2QC2|B Chain B, Crystal Structure Of Severe Acute Respiratory Syndrome
(Sars) 3c-Like Protease Asn214ala Mutant
Length = 308
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 95 TNPLTTSY--ITISPGQTLDVLLQANQNPNLYYMASSVYSTVVNLDFINNTTAT 146
+NP T Y + I PGQT VL N +P+ Y + + + F+N + +
Sbjct: 96 SNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGS 149
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,095,797
Number of Sequences: 62578
Number of extensions: 503524
Number of successful extensions: 1437
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1329
Number of HSP's gapped (non-prelim): 112
length of query: 412
length of database: 14,973,337
effective HSP length: 101
effective length of query: 311
effective length of database: 8,652,959
effective search space: 2691070249
effective search space used: 2691070249
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)