BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036844
(390 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/374 (60%), Positives = 280/374 (74%), Gaps = 1/374 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+GTATP +C YQ+DY D+YF+ T SEH T LK+KF RIC++ I KRY HLTEE+
Sbjct: 604 ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEM 663
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L+E+PN+ Y APSL+ RQ ++ EVPKLGKEAALKA+KEWGQ SKITHL+F GV+
Sbjct: 664 LEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVE 723
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L LLGL+PSV R+M+Y+QGCY GGTV+R AKD+AENN GARVLVVCS+I V+
Sbjct: 724 MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVV 783
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSE LD LV QA+FGD PDIS ER LFQ++S QT IP++ I
Sbjct: 784 TFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDIS-IERPLFQLVSAAQTFIPNSAGAIA 842
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E+G+ HL +VP I + + KCL+ A P+GISDWNSLF++ HPGG ++D VE
Sbjct: 843 GNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEA 902
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L K KL A+R+VL EYGN+ +A V FILDE+RKKS + +ATTGEGLD GVLFG GP
Sbjct: 903 KLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGP 962
Query: 372 GLTVETVVLQSFPI 385
GLT+ETVVL S P+
Sbjct: 963 GLTIETVVLHSIPM 976
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/377 (59%), Positives = 278/377 (73%), Gaps = 1/377 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+GTATPPNC QADY D+YFR T SEH +LKEKFKRICE+ I KRY LTE+
Sbjct: 22 ATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDY 81
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L+ENP MC + APSL+ARQ +++ VP LGKEAA+KAI EWG SKITHLIF GVD
Sbjct: 82 LQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVD 141
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +LVKLLGL PSV R M+Y QG GGTV+RLAKD+AENN G+RVL+VCS+I +
Sbjct: 142 MPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKGSRVLIVCSEITAI 201
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
FH P+E HLD LV QA+FGD P ++ ER +F+++S QT +PDTE +
Sbjct: 202 LFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAV-ERPIFEIVSTDQTILPDTEKAMK 260
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
L+E G+ L DVP+ + K I A+SP+GI+DWNS+F+++HPGG ++DQVE+
Sbjct: 261 LHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVER 320
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L +DKL ASR+VL EYGN+ +A V FI+DEVRK+S E K+TTGEGLDCGVLFG GP
Sbjct: 321 KLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGP 380
Query: 372 GLTVETVVLQSFPIDST 388
G+TVETVVL+S + +
Sbjct: 381 GMTVETVVLRSVRVTAA 397
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/376 (58%), Positives = 275/376 (73%), Gaps = 1/376 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT++A+GTA PPNC+YQAD+PDFYFR TNS+H LK+KFKR+CE I KRY H+TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENPN+ Y A SL+ R M + V +LGKEAALKAIKEWGQ SKITHLI GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLL L PSV R M Y+ GCY GGTV+RLAKDIAENN GARVL+VCS++
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSETHLD ++ QA+FGD PD++ ER +F+++S QT +P++ I
Sbjct: 193 CFRGPSETHLDSMIGQALFGDGAAAVIVGADPDLTV-ERPIFELVSTAQTIVPESHGAIE 251
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L E G+ HL VP I I CLS+A +P+ ISDWNSLF++ HPGG ++DQV
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+GL K+KL +R VL++YGN+ +A+VFFI+DE+RKKS E +ATTGEGL+ GVLFG GP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 372 GLTVETVVLQSFPIDS 387
G+TVETVVL+S P+ S
Sbjct: 372 GITVETVVLRSVPVIS 387
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/376 (58%), Positives = 274/376 (72%), Gaps = 1/376 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT++A+GTA PPNC+YQAD+PDFYFR TNS+H LK+KFKR+CE I KRY H+TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENPN+ Y A SL+ R M + V +LGKEAALKAIKEWGQ SKITHLI GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLL L PSV R M Y+ GCY GGTV+RLAKDIAENN GARVL+VCS++
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSETHLD ++ QA+ GD PD++ ER +F+++S QT +P++ I
Sbjct: 193 CFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTV-ERPIFELVSTAQTIVPESHGAIE 251
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L E G+ HL VP I I CLS+A +P+ ISDWNSLF++ HPGG ++DQV
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+GL K+KL +R VL++YGN+ +A+VFFI+DE+RKKS E +ATTGEGL+ GVLFG GP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 372 GLTVETVVLQSFPIDS 387
G+TVETVVL+S P+ S
Sbjct: 372 GITVETVVLRSVPVIS 387
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/387 (58%), Positives = 283/387 (73%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 282/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 3 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 62
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 63 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 122
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 123 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 182
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 183 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 241
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 242 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 301
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 302 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 361
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 362 EGLEWGVLFGFGPGLTIETVVLRSVAI 388
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 453 bits (1166), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDAHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 3 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 62
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 63 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 122
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 123 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 182
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 183 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 241
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 242 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 301
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
PGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 302 QPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 361
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 362 EGLEWGVLFGFGPGLTIETVVLRSVAI 388
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 2 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 61
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 62 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 121
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 122 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 181
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 182 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 240
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 241 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 300
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYG + +A V FILDE+RKKS + TTG
Sbjct: 301 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTG 360
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 361 EGLEWGVLFGFGPGLTIETVVLRSVAI 387
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+ GD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALSGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/387 (57%), Positives = 281/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QG + GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 446 bits (1148), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/387 (57%), Positives = 280/387 (72%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 8 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 67
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQAML EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 68 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQPKSK 127
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI + D+PGAD +L KLLGL+P V R+ ++ GC+ GGTV+RLAKD+AENN G
Sbjct: 128 ITHLIVCSTTTPDLPGADYQLTKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKG 187
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 188 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 246
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL VP + K I K L A P+GISD+NS+F++
Sbjct: 247 AQTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFEPLGISDYNSIFWIA 306
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 307 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 366
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 367 EGLEWGVLFGFGPGLTIETVVLRSVAI 393
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/374 (56%), Positives = 269/374 (71%), Gaps = 1/374 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT+LA+GTA PPNC Q+ Y D+YFR TNSEH T+LK+KF+RICER I R+ +LTEEI
Sbjct: 18 ATVLAIGTANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEI 77
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENPNMC Y APSLDAR+ M+I EVP++GKEAA KAIKEWGQ +SKITHLIF GV
Sbjct: 78 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVA 137
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D L+ LLGL PSV R M+Y+QGC+ GGTV+RLAKD+AENN ARVL+VCS+ +
Sbjct: 138 LPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTSV 197
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSET +D LV QA+F D P + E LF+++S Q +P++ I
Sbjct: 198 TFRGPSETDMDSLVGQALFADGAAAIIIGSDP-VPEVENPLFEIVSTDQQLVPNSHGAIG 256
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E+G+ +L+ VP I + I LS A P+GISD+NS+F++ HPGG ++DQVE+
Sbjct: 257 GLLREVGLTFYLNKSVPDIISQNINDALSKAFDPLGISDYNSIFWIAHPGGRAILDQVEE 316
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+ L +K+ A+R VL YGN+ +A VFFI+D +RKKS E TTGEGLD GVLFG GP
Sbjct: 317 KVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKTTGEGLDWGVLFGFGP 376
Query: 372 GLTVETVVLQSFPI 385
GLT+ETVVL+S I
Sbjct: 377 GLTIETVVLRSMAI 390
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 264/375 (70%), Gaps = 2/375 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A+ILA+GTA PPN Q+ YPDFYFR T +EH TELK+KFKRICER I +RY +LTEEI
Sbjct: 23 ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 82
Query: 72 LKENPNMCCY-NAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGV 130
LK+NP++C + PSLDARQAML EVP+L KEAA KAI+EWGQS S ITHLIF +
Sbjct: 83 LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 142
Query: 131 DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 190
D+PGAD + KLLGL PSV R+ ++ GC+ GGTV+R+AKD+AENN GARVLV+CS+
Sbjct: 143 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 202
Query: 191 LDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYI 250
+ F PSETHLD LV QA+FGD P I E+ F+++ QT +P++E I
Sbjct: 203 VTFRGPSETHLDSLVGQALFGDGASALIVGADP-IPQVEKACFEIVWTAQTVVPNSEGAI 261
Query: 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVE 310
G+++E+G+ L VP I I C+ A S ISDWN LF+V+HPGG ++D+VE
Sbjct: 262 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 321
Query: 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCG 370
L L KL +R+V+ EYGN+ +A V FILD+ RK S + +TTGEGL+ GVLFG G
Sbjct: 322 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 381
Query: 371 PGLTVETVVLQSFPI 385
PGLT+ETVVL+S PI
Sbjct: 382 PGLTIETVVLKSVPI 396
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 264/375 (70%), Gaps = 2/375 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A+ILA+GTA PPN Q+ YPDFYFR T +EH TELK+KFKRICER I +RY +LTEEI
Sbjct: 39 ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 98
Query: 72 LKENPNMCCY-NAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGV 130
LK+NP++C + PSLDARQAML EVP+L KEAA KAI+EWGQS S ITHLIF +
Sbjct: 99 LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 158
Query: 131 DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 190
D+PGAD + KLLGL PSV R+ ++ GC+ GGTV+R+AKD+AENN GARVLV+CS+
Sbjct: 159 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 218
Query: 191 LDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYI 250
+ F PSETHLD LV QA+FGD P I E+ F+++ QT +P++E I
Sbjct: 219 VTFRGPSETHLDSLVGQALFGDGASALIVGADP-IPQVEKACFEIVWTAQTVVPNSEGAI 277
Query: 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVE 310
G+++E+G+ L VP I I C+ A S ISDWN LF+V+HPGG ++D+VE
Sbjct: 278 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 337
Query: 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCG 370
L L KL +R+V+ EYGN+ +A V FILD+ RK S + +TTGEGL+ GVLFG G
Sbjct: 338 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 397
Query: 371 PGLTVETVVLQSFPI 385
PGLT+ETVVL+S PI
Sbjct: 398 PGLTIETVVLKSVPI 412
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/374 (51%), Positives = 258/374 (68%), Gaps = 1/374 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+GT+ P N F Q+ YPDF+F TN KTELK+KF+RIC++ I KR+FHLT+EI
Sbjct: 30 ATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTDEI 89
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L++NP++C + SLD RQ + + EVPKL KEAA+ AIK+WGQ SKITHL+F+ GVD
Sbjct: 90 LRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVD 149
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLLGL+P+V R+M+Y QG Y G TV+R+AKD+AENN GARVLV CS++ +
Sbjct: 150 MPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEVTAV 209
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSETHLD LV A+FGD P + E+ LF++ + +PD++ I
Sbjct: 210 TFRAPSETHLDGLVGSALFGDGAAALIVGSDP-VPQEEKPLFEIHWAGEAVLPDSDGAIN 268
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E G+ HL DVP I K I K L+ + + +N +F+ +HPGG ++DQ+E
Sbjct: 269 GHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDMFWAVHPGGPAILDQIEA 328
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
LGL DK+ ASR VL YGN+ +ASV F+LD++RK S E TTGEG + G + G GP
Sbjct: 329 KLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIGFGP 388
Query: 372 GLTVETVVLQSFPI 385
GLTVET++L+S I
Sbjct: 389 GLTVETLLLRSINI 402
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 265/387 (68%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
+ ++ QR ATI+A+GTATPPN + Q+ +PDFYFR TNS+ K ELK+KF+R+CE+
Sbjct: 4 LHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKT 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
+ KRY HLTEEILKE P +C Y S D RQ ++++E+P+L KEAA KAIKEWG+ S+
Sbjct: 64 MVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSE 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHL+F + G+DMPGAD RL LLGL +VNRLMIY+Q C+MG ++R+AKD+AENN G
Sbjct: 124 ITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVV +I VL F P+E + L QA FGD P + E+ ++++ +
Sbjct: 184 ARVLVVACEITVLSFRGPNEGDFEALAFQAGFGDGAGAVVVGADP-LEGIEKPIYEIAAA 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
Q T+ +++ + G L+ G + +P I +G+ L A++P+G+ +WN +F+V
Sbjct: 243 MQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPG +ID +E L L DKL +R+V EYGN+ +A+V+F++DE+RK+S E ++TTG
Sbjct: 303 HPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
+GL GVL G GPGL++ETVVL+S P+
Sbjct: 363 DGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 265/387 (68%), Gaps = 3/387 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
+ ++ QR ATI+A+GTATPPN + Q+ +PDFYFR TNS+ K ELK+KF+R+CE+
Sbjct: 4 LHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKT 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
+ KRY HLTEEILKE P +C Y S D RQ ++++E+P+L KEAA KAIKEWG+ S+
Sbjct: 64 MVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSE 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHL+F + G+DMPGAD RL LLGL +VNRLMIY+Q C+MG ++R+AKD+AENN G
Sbjct: 124 ITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVV +I VL F P+E + L QA FGD P + E+ ++++ +
Sbjct: 184 ARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADP-LEGIEKPIYEIAAA 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
Q T+ +++ + G L+ G + +P I +G+ L A++P+G+ +WN +F+V
Sbjct: 243 MQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPG +ID +E L L DKL +R+V EYGN+ +A+V+F++DE+RK+S E ++TTG
Sbjct: 303 HPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
+GL GVL G GPGL++ETVVL+S P+
Sbjct: 363 DGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/374 (48%), Positives = 251/374 (67%), Gaps = 1/374 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT+LA+G A P N F QA YPDF+F TNS K LK KF+RIC++ I KR+F+L ++I
Sbjct: 35 ATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYLDQKI 94
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L+ NP MC Y SL+ RQ + + +VPKL KEA++ AIKEWG+ S+ITH++ + GV+
Sbjct: 95 LESNPAMCTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVN 154
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGA++ KLLGL+P+V R+M+Y QG + G TV+R+AKD+AENN GARVL +CS++ +
Sbjct: 155 MPGAELATAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLAENNAGARVLAICSEVTAV 214
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSETH+D LV A+FGD P ER ++++ + +P+++ I
Sbjct: 215 TFRAPSETHIDGLVGSALFGDGAAAVIVGSDPR-PGIERPIYEMHWAGEMVLPESDGAID 273
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L E G+ HL DVP I K IG L + + +G S WN LF+ +HPGG ++DQVE
Sbjct: 274 GHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNELFWAVHPGGPAILDQVEA 333
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L K K ASR +L +YGN+ +ASV F+LD VR++S E K+T GEG + G L G GP
Sbjct: 334 KLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKSTFGEGSEWGFLIGFGP 393
Query: 372 GLTVETVVLQSFPI 385
GLTVET++L++ P+
Sbjct: 394 GLTVETLLLRALPL 407
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/377 (49%), Positives = 254/377 (67%), Gaps = 4/377 (1%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT++A+GTA PP+ F Q Y D YFRATNSEHK ELK+KF IC++ I KRYF+ EE
Sbjct: 30 ATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEF 89
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LK+ PN+ Y+ PSL+ RQ + + VP LG EAA+KAI+EWG+ S+ITHL+F GVD
Sbjct: 90 LKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVD 149
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MP AD + KLLGL +VN+ IY QG Y GGTV+R AKD+AENN GARVLVVC+++ ++
Sbjct: 150 MPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTIM 209
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
P+ETHLD + ++FGD P I E+ +F+++ QT IP+TE+ I
Sbjct: 210 GLRAPNETHLDNAIGISLFGDGAAALIIGSDP-IIGVEKPMFEIVCTKQTVIPNTEDVIH 268
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS---DWNSLFYVLHPGGDGLIDQ 308
L+E G+ +LS P+ I + CL + +GI+ DWNSLF++ HPGG ++DQ
Sbjct: 269 LHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILDQ 328
Query: 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFG 368
VE L L +K A+R VL +YGN+ +ASV +ILDE+R+KS + T GEGL+ GVL G
Sbjct: 329 VEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLLG 388
Query: 369 CGPGLTVETVVLQSFPI 385
GPG+TVET++L S P+
Sbjct: 389 FGPGITVETILLHSLPL 405
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/377 (49%), Positives = 254/377 (67%), Gaps = 4/377 (1%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT++A+GTA PP+ F Q Y D YFRATNSEHK ELK+KF IC++ I KRYF+ EE
Sbjct: 30 ATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEF 89
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LK+ PN+ Y+ PSL+ RQ + + VP LG EAA+KAI+EWG+ S+ITHL+F GVD
Sbjct: 90 LKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVD 149
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MP AD + KLLGL +VN+ IY QG Y GGTV+R AKD+AENN GARVLVVC+++ ++
Sbjct: 150 MPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTIM 209
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
P+ETHLD + ++FGD P I E+ +F+++ QT IP+TE+ I
Sbjct: 210 MLRAPNETHLDNAIGISLFGDGAAALIIGSDP-IIGVEKPMFEIVCTKQTVIPNTEDVIH 268
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS---DWNSLFYVLHPGGDGLIDQ 308
L+E G+ +LS P+ I + CL + +GI+ DWNSLF++ HPGG ++DQ
Sbjct: 269 LHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILDQ 328
Query: 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFG 368
VE L L +K A+R VL +YGN+ +ASV +ILDE+R+KS + T GEGL+ GVL G
Sbjct: 329 VEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLLG 388
Query: 369 CGPGLTVETVVLQSFPI 385
GPG+TVET++L S P+
Sbjct: 389 FGPGITVETILLHSLPL 405
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 231/375 (61%), Gaps = 8/375 (2%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A +LA+GTA PPNC Q + PDFYFR TNS+H T LK+KFKRIC+ + +RY H TEE+
Sbjct: 11 AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 70
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L +P +APSLDAR + D VP+L EAA KAI EWG+ + ITHL+ + G
Sbjct: 71 LSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 130
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D RLV LLGL+PSV R M++ GC+ G +RLAKD+AEN+ GARVLVV +++ ++
Sbjct: 131 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM 190
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F P E L+VQ +FGD D + ER LF+++S QT IP++++ +
Sbjct: 191 YFTGPDEGCFRTLLVQGLFGDGAAAVIVGA--DADDVERPLFEIVSAAQTIIPESDHALN 248
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAM----SPIGISDWNSLFYVLHPGGDGLID 307
+ E + G L VP IG + +CL + G WN LF+ +HPG ++D
Sbjct: 249 MRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMD 308
Query: 308 QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLF 367
QV+ LGL KL ASR VL +YGN+ A+V F LDE+R++ E A GE + GV+
Sbjct: 309 QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AAAAGEWPELGVMM 366
Query: 368 GCGPGLTVETVVLQS 382
GPG+TV+ ++L +
Sbjct: 367 AFGPGMTVDAMLLHA 381
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 311 bits (798), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 231/375 (61%), Gaps = 8/375 (2%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A +LA+GTA PPNC Q + PDFYFR TNS+H T LK+KFKRIC+ + +RY H TEE+
Sbjct: 41 AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 100
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L +P +APSLDAR + D VP+L EAA KAI EWG+ + ITHL+ + G
Sbjct: 101 LSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 160
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D RLV LLGL+PSV R M++ GC+ G +RLAKD+AEN+ GARVLVV +++ ++
Sbjct: 161 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM 220
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F P E L+VQ +FGD D + ER LF+++S QT IP++++ +
Sbjct: 221 YFTGPDEGCFRTLLVQGLFGDGAAAVIVGA--DADDVERPLFEIVSAAQTIIPESDHALN 278
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAM----SPIGISDWNSLFYVLHPGGDGLID 307
+ E + G L VP IG + +CL + G WN LF+ +HPG ++D
Sbjct: 279 MRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMD 338
Query: 308 QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLF 367
QV+ LGL KL ASR VL +YGN+ A+V F LDE+R++ E A GE + GV+
Sbjct: 339 QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AAAAGEWPELGVMM 396
Query: 368 GCGPGLTVETVVLQS 382
GPG+TV+ ++L +
Sbjct: 397 AFGPGMTVDAMLLHA 411
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 26/384 (6%)
Query: 5 KSNQRPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRY 64
KSN + +L +G + P Q D + + K E EK KRI E+ I R
Sbjct: 9 KSNNN--SFVLGIGISVPGEPISQQSLKDSI--SNDFSDKAETNEKVKRIFEQSQIKTR- 63
Query: 65 FHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIF 124
HL + K ++ + ++ VP L ++A L+A+K+WG ITH++
Sbjct: 64 -HLVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVS 122
Query: 125 SAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVV 184
G+ +P + +L+ LLGL V R+ + GC G + +R A +A+ +P R+LVV
Sbjct: 123 VTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVV 182
Query: 185 CSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIP 244
C+++ L F D +V ++F D P I E L++V+ + P
Sbjct: 183 CTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRI--EETPLYEVMCSINRSFP 238
Query: 245 DTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLF-----YVLH 299
+TEN + L++ G L +P+ IG I + + + ++ +++H
Sbjct: 239 NTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIH 298
Query: 300 PGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK-KSFEERKATTG 358
GG ++ +E +LG+ + + V YGN+ +ASV F++D RK KS
Sbjct: 299 TGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLPTY----- 353
Query: 359 EGLDCGVLFGCGPGLTVETVVLQS 382
+ GPGL E L++
Sbjct: 354 -----SISLAFGPGLAFEGCFLKN 372
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 158/365 (43%), Gaps = 13/365 (3%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A I + T TP Q+D D R +E+ R+ ++ I R + +
Sbjct: 33 AVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVDP 87
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L ++ ++ R + + L + + +A+ ++I L+ + G
Sbjct: 88 LDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI 147
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
PG DV +VK LGL PS++R+++ GC + A + +P + LVVC I +
Sbjct: 148 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IELF 205
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
+ ++ +V+ ++FGD E V S + +TE+ I
Sbjct: 206 SVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIV 265
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
+ GI LS ++P I + ++ + G+ + + +HPGG +I+Q +
Sbjct: 266 LGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVR 325
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+LG+ + S VL +GN+ + S+ F+L+ + + +A + + + GV F GP
Sbjct: 326 SLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFGP 379
Query: 372 GLTVE 376
G+TVE
Sbjct: 380 GVTVE 384
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 158/365 (43%), Gaps = 13/365 (3%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A I + T TP Q+D D R +E+ R+ ++ I R + +
Sbjct: 33 AVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVDP 87
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L ++ ++ R + + L + + +A+ ++I L+ + G
Sbjct: 88 LDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI 147
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
PG DV +VK LGL PS++R+++ GC + A + +P + LVVC I +
Sbjct: 148 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IELC 205
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
+ ++ +V+ ++FGD E V S + +TE+ I
Sbjct: 206 SVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIV 265
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
+ GI LS ++P I + ++ + G+ + + +HPGG +I+Q +
Sbjct: 266 LGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVR 325
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+LG+ + S VL +GN+ + S+ F+L+ + + +A + + + GV F GP
Sbjct: 326 SLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFGP 379
Query: 372 GLTVE 376
G+TVE
Sbjct: 380 GVTVE 384
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 31/342 (9%)
Query: 63 RYFHLTEEILKENPNMCCYNAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
RY + + NP+ N P+ + + + D VP L EA+ KA+ E ++
Sbjct: 73 RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 131
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI-----A 173
ITH++ + PG D + K LGL + +++++ GC G +R A ++ A
Sbjct: 132 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTA 191
Query: 174 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFGDXXXXXXXXXXPDISNHE 229
P AR+LV+ ++ E+ +D L + A+F D + +
Sbjct: 192 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 249
Query: 230 RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS----- 284
++ +L IPD+E+ + + MG LS VPV + ++ +S
Sbjct: 250 PAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 309
Query: 285 -PIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS--RYVLREYGNVGAASVFFI 341
P + +HPGG ++ E +GL + + AS RY+ +GN +A++F +
Sbjct: 310 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 367
Query: 342 LDEVRKKSFEERKATTGEGLDCGVLFGC--GPGLTVETVVLQ 381
L+ +R+K + A G + GC GPG+ VE +L+
Sbjct: 368 LNRLREKDMD---ALAPGGKVKEYVVGCAFGPGINVEMCMLK 406
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 150/342 (43%), Gaps = 31/342 (9%)
Query: 63 RYFHLTEEILKENPNMCCYNAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
RY + + NP+ N P+ + + + D VP L EA+ KA+ E ++
Sbjct: 44 RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 102
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI-----A 173
ITH++ + PG D + K LGL + +++++ G G +R A ++ A
Sbjct: 103 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTA 162
Query: 174 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFGDXXXXXXXXXXPDISNHE 229
P AR+LV+ ++ E+ +D L + A+F D + +
Sbjct: 163 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 220
Query: 230 RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS----- 284
++ +L IPD+E+ + G + MG LS VPV + ++ +S
Sbjct: 221 PAIYDLLGWENRVIPDSEHDLGGDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 280
Query: 285 -PIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS--RYVLREYGNVGAASVFFI 341
P + +HPGG ++ E +GL + + AS RY+ +GN +A++F +
Sbjct: 281 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 338
Query: 342 LDEVRKKSFEERKATTGEGLDCGVLFGC--GPGLTVETVVLQ 381
L+ +R+K + A G + GC GPG+ VE +L+
Sbjct: 339 LNRLREKDMD---ALAPGGKVKEYVVGCAFGPGINVEMCMLK 377
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 23/274 (8%)
Query: 107 KAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVI 166
+A+ + + I +I+ + G MP L+ +G + ++ I GC GG I
Sbjct: 94 RALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAI 153
Query: 167 RLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDIS 226
A D P A L+V + L + +P++ + L+ +FGD +
Sbjct: 154 NRAHDFCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAV------VR 206
Query: 227 NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI 286
T ++ IP TE++I +K G + L VP + + L+ A+ +
Sbjct: 207 GRGGTGVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-----EPLAPALKEL 261
Query: 287 -GISDWNSL---FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFIL 342
G W++ FY++H GG ++D + L + SR L EYGN+ +A +L
Sbjct: 262 AGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASA---VVL 318
Query: 343 DEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVE 376
D +R+ F+E G G+L G GPG+T E
Sbjct: 319 DALRRL-FDEGGVEEGAR---GLLAGFGPGITAE 348
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 31/342 (9%)
Query: 63 RYFHLTEEILKENPNMCCYNAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
RY + + NP+ N P+ + + + D VP L EA+ KA+ E ++
Sbjct: 44 RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 102
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI-----A 173
ITH++ + PG D + K LGL + +++++ G G +R A ++ A
Sbjct: 103 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTA 162
Query: 174 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFGDXXXXXXXXXXPDISNHE 229
P AR+LV+ ++ E+ +D L + A+F D + +
Sbjct: 163 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 220
Query: 230 RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS----- 284
++ +L IPD+E+ + + MG LS VPV + ++ +S
Sbjct: 221 PAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 280
Query: 285 -PIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS--RYVLREYGNVGAASVFFI 341
P + +HPGG ++ E +GL + + AS RY+ +GN +A++F +
Sbjct: 281 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 338
Query: 342 LDEVRKKSFEERKATTGEGLDCGVLFGC--GPGLTVETVVLQ 381
L+ +R+K + A G + GC GPG+ VE +L+
Sbjct: 339 LNRLREKDMD---ALAPGGKVKEYVVGCAFGPGINVEMCMLK 377
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 24/294 (8%)
Query: 89 RQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPS 148
R A + V G+ AA A++ G V+ + LI S +PG DV L L L+
Sbjct: 129 RTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188
Query: 149 VNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQA 208
L C G + LA D+ +P VLVV S+ + ++P++ L+ L+V+
Sbjct: 189 TMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEA-LSTTYQPADDTLESLIVRL 247
Query: 209 VFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVP 268
+F D P ++ ++ + T+P T + + + G + + P
Sbjct: 248 LFADTAVAAVVTGRP----RPESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGP 303
Query: 269 VAIGKYIGKCLS--NAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS--- 323
A+ + + S W+ + HPGG +++ +E+ + D+ W S
Sbjct: 304 RAVQETVTAMWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTM---PDE-WPSGLL 359
Query: 324 RYVLREY--GNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTV 375
Y Y GN G A+VF IL +++ + + T VL+ PGLT
Sbjct: 360 SYSRDSYTSGNRGGAAVFDIL----RRAHDAGQKTGSR----AVLYAAAPGLTA 405
>pdb|3SQZ|A Chain A, Crystal Structure Of Hmg_coa Synthase Complexed With Coa
Length = 389
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 118 KITHLIFSAFYGVDMPGADVRLV-KLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176
KI +I + VD A V LLG++P + CY + AK E +
Sbjct: 70 KIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAXCYSATAALNYAKLHVEKH 129
Query: 177 PGARVLVVCSDIRVLDFHEPSET 199
P RVLV+ SDI P E+
Sbjct: 130 PDTRVLVLASDIAKYGIGTPGES 152
>pdb|3LEH|A Chain A, The Crystal Structure Of Smu.943c From Streptococcus
Mutans Ua159
Length = 425
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 118 KITHLIFSAFYGVDMPGADVRLV-KLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176
KI +I + VD A V LLG++P R + CY + AK E +
Sbjct: 104 KIDMVILATESSVDQSKAGAVYVHSLLGIQP-FARSFEMKEACYSATAALNYAKLHVEKH 162
Query: 177 PGARVLVVCSDIRVLDFHEPSET 199
P RVLV+ SDI P E+
Sbjct: 163 PDTRVLVLASDIAKYGIGTPGES 185
>pdb|2HDB|A Chain A, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
pdb|2HDB|B Chain B, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
Length = 383
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
A V L +L+G++P I +GCY ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEGCYGATAGLQLAKNHVALHPDKKVLVVAADI 140
>pdb|1XPL|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPM|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
Length = 390
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 187
++ LLG++P + CY I+LAKD P +VLV+ +D
Sbjct: 90 QIHNLLGIQPFARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
pdb|1XPK|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 187
++ LLG++P + CY I+LAKD P +VLV+ +D
Sbjct: 90 QIHNLLGIQPFARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 187
++ LLG++P R + CY I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1X9E|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
pdb|1X9E|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
Length = 383
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
A V L +L+G++P I + CY ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNHVALHPDKKVLVVAADI 140
>pdb|3V4X|A Chain A, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|B Chain B, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|C Chain C, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|D Chain D, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
Length = 388
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
A V L +L+G++P I + CY ++LAK+ +P +VLVV +DI
Sbjct: 92 AAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNHVALHPDKKVLVVAADI 145
>pdb|1YSL|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis With Acetoacetyl-Coa Ligand
Length = 384
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTV-IRLAKDIAENNPGARVLVVCSDI 188
A V L +L+G++P I + C G T ++LAK+ +P +VLVV +DI
Sbjct: 87 AAAVVLHRLMGIQPFARSFEI-KEACXYGATAGLQLAKNHVALHPDKKVLVVAADI 141
>pdb|4EG1|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG1|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG3|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG3|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG6|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG6|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG8|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|4EG8|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|3U1E|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1E|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1F|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1F|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1G|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U1G|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U20|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
pdb|3U20|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
Length = 542
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 24 NCFYQADYP-DFYFRATNSEHKTELKEKFKRICERQPI 60
CF Q DY D++ R TN +HK +KE + ++ ++ I
Sbjct: 86 KCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
>pdb|4EG5|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
pdb|4EG5|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
Length = 542
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 24 NCFYQADYP-DFYFRATNSEHKTELKEKFKRICERQPI 60
CF Q DY D++ R TN +HK +KE + ++ ++ I
Sbjct: 86 KCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Nadh
pdb|2X0J|A Chain A, 2.8 A Resolution Structure Of Malate Dehydrogenase From
Archaeoglobus Fulgidus In Complex With Etheno-Nad
Length = 294
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 79 CCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVR 138
C N LD + L+D L A+ + + K ++ A Y + + G+++
Sbjct: 19 CLLN---LDVDEIALVDIAEDLAVGEAMD-LAHAAAGIDKYPKIVGGADYSL-LKGSEII 73
Query: 139 LVKL-LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF 193
+V L KP + RL + ++ G + +AK I EN P +++LVV + + V+ +
Sbjct: 74 VVTAGLARKPGMTRLDLAHKNA---GIIKDIAKKIVENAPESKILVVTNPMDVMTY 126
>pdb|3IL4|A Chain A, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|B Chain B, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|C Chain C, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|D Chain D, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
Length = 320
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 288 ISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347
++D + +LH +ID++ + + ++K + + +YGN AAS+ +LDE
Sbjct: 234 VTDETVDYLLLHQASVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 287
Query: 348 KSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
+ E G VL G G GLT +++L
Sbjct: 288 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 318
>pdb|3IL6|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-[(3r,
5s)-3,5-Dimethylpiperidin-1-Yl]-3-Phenoxybenzoyl}amino)
Benzoic Acid
Length = 321
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 288 ISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347
++D + +LH +ID++ + + ++K + + +YGN AAS+ +LDE
Sbjct: 235 VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 288
Query: 348 KSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
+ E G VL G G GLT +++L
Sbjct: 289 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 319
>pdb|3IL5|A Chain A, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|B Chain B, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|C Chain C, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|D Chain D, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
Length = 343
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 288 ISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347
++D + +LH +ID++ + + ++K + + +YGN AAS+ +LDE
Sbjct: 255 VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE--- 308
Query: 348 KSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
+ E G VL G G GLT +++L
Sbjct: 309 -AVENGTLILGSQQRV-VLTGFGGGLTWGSLLL 339
>pdb|1ZOW|A Chain A, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|B Chain B, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|C Chain C, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|D Chain D, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|3IL7|A Chain A, Crystal Structure Of S. Aureus Fabh
pdb|3IL7|B Chain B, Crystal Structure Of S. Aureus Fabh
Length = 313
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 295 FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354
++ H +++ + LG+ KDK+ S + +YGN AAS+ +D +E K
Sbjct: 234 LFIPHQANIRIMESARERLGISKDKMSVS---VNKYGNTSAASIPLSID-------QELK 283
Query: 355 ATTGEGLDCGVLFGCGPGLT 374
+ D VL G G GLT
Sbjct: 284 NGKLKDDDTIVLVGFGGGLT 303
>pdb|1TVZ|A Chain A, Crystal Structure Of 3-hydroxy-3-methylglutaryl-coenzyme A
Synthase From Staphylococcus Aureus
pdb|1TXT|A Chain A, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|B Chain B, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|C Chain C, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|D Chain D, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
Length = 388
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 187
++ LLG++P R + Y I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 187
++ LLG++P R + Y I+LAKD P +VLV+ +D
Sbjct: 91 QIHNLLGIQPFA-RCFEMKEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|3TUN|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|3TUN|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|4EG4|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG4|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG7|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EG7|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EGA|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|4EGA|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|3U1Z|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
pdb|3U1Z|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
Length = 542
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 26 FYQADYP-DFYFRATNSEHKTELKEKFKRICERQPI 60
F Q DY D++ R TN +HK +KE + ++ ++ I
Sbjct: 88 FEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,838,357
Number of Sequences: 62578
Number of extensions: 494864
Number of successful extensions: 1092
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 56
length of query: 390
length of database: 14,973,337
effective HSP length: 101
effective length of query: 289
effective length of database: 8,652,959
effective search space: 2500705151
effective search space used: 2500705151
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)