Query 036852
Match_columns 408
No_of_seqs 296 out of 1593
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 06:04:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036852.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036852hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 4.8E-46 1E-50 370.9 29.8 256 120-405 62-331 (365)
2 KOG0697 Protein phosphatase 1B 100.0 7E-45 1.5E-49 336.1 23.1 255 117-405 16-292 (379)
3 KOG0698 Serine/threonine prote 100.0 1.3E-43 2.8E-48 350.9 27.5 255 122-406 39-306 (330)
4 PTZ00224 protein phosphatase 2 100.0 2.3E-43 4.9E-48 352.9 29.4 243 119-407 18-274 (381)
5 PF00481 PP2C: Protein phospha 100.0 8.6E-43 1.9E-47 333.3 18.6 241 124-396 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.3E-41 2.8E-46 326.5 22.2 237 121-406 6-254 (262)
7 cd00143 PP2Cc Serine/threonine 100.0 2.5E-36 5.5E-41 285.8 28.2 244 123-403 1-254 (254)
8 smart00332 PP2Cc Serine/threon 100.0 2.5E-36 5.5E-41 286.8 28.1 243 121-401 4-255 (255)
9 PRK14559 putative protein seri 100.0 6.8E-37 1.5E-41 322.3 26.6 246 122-405 374-636 (645)
10 KOG0699 Serine/threonine prote 100.0 3.5E-37 7.5E-42 293.8 18.7 162 217-406 329-505 (542)
11 KOG0700 Protein phosphatase 2C 100.0 2.1E-32 4.5E-37 267.2 18.7 210 158-393 98-380 (390)
12 KOG1323 Serine/threonine phosp 99.9 1.8E-25 4E-30 211.8 19.7 167 217-406 245-489 (493)
13 KOG1379 Serine/threonine prote 99.9 5.1E-22 1.1E-26 188.6 20.7 171 135-345 89-274 (330)
14 KOG0618 Serine/threonine phosp 99.8 2.5E-19 5.4E-24 189.7 14.9 238 121-407 520-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 1.2E-18 2.5E-23 161.7 13.5 178 128-345 3-196 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 5.4E-15 1.2E-19 135.0 18.4 156 135-342 15-174 (193)
17 TIGR02865 spore_II_E stage II 99.5 3E-12 6.6E-17 139.6 20.2 202 121-403 550-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 1.2E-10 2.5E-15 106.1 20.3 124 217-404 59-193 (193)
19 COG2208 RsbU Serine phosphatas 98.0 0.00049 1.1E-08 69.5 18.7 125 218-405 231-367 (367)
20 PF09436 DUF2016: Domain of un 43.2 14 0.0003 28.3 1.3 21 314-334 24-44 (72)
21 PRK10693 response regulator of 38.4 3.3E+02 0.007 26.4 10.6 31 220-250 227-259 (303)
22 COG3700 AphA Acid phosphatase 37.2 62 0.0014 29.5 4.7 49 317-391 71-130 (237)
23 TIGR00067 glut_race glutamate 33.6 65 0.0014 30.7 4.6 23 162-184 1-24 (251)
24 PRK00865 glutamate racemase; P 32.6 72 0.0016 30.5 4.8 24 161-184 7-31 (261)
25 PF01436 NHL: NHL repeat; Int 22.0 1.9E+02 0.0042 17.3 3.8 21 225-245 8-28 (28)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=4.8e-46 Score=370.94 Aligned_cols=256 Identities=34% Similarity=0.463 Sum_probs=198.6
Q ss_pred CCCCeEEEeecCCCCCCceeeEeccCCcccc--cccccccCceEEEEEeCCCCcHHHHHHHHHHHHh----hhhH-HhHH
Q 036852 120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQ--NFETAADELHYFGVYDGHGCSHVAMRCRERLHEL----RSFT-RMDK 192 (408)
Q Consensus 120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~--~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~----~~~~-~~~~ 192 (408)
.+-+++|..|++|.|+.|||++++..++... ..........||||||||||+.++++++++++.. ..+. .+.+
T Consensus 62 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~ 141 (365)
T PLN03145 62 IPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEK 141 (365)
T ss_pred cCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHH
Confidence 3557899999999999999999876543211 0001112458999999999999999999988765 1111 1222
Q ss_pred HHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcC
Q 036852 193 EVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAG 272 (408)
Q Consensus 193 ~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~G 272 (408)
.+......+....... ........||||++++++.++++|++||||||+|++++|++++||+||+|.++.|.+||.+.|
T Consensus 142 al~~af~~~d~~~~~~-~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~G 220 (365)
T PLN03145 142 VVSSAFLQTDTAFAEA-CSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASG 220 (365)
T ss_pred HHHHHHHHHhHHHHhh-hccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcC
Confidence 2333322222221111 111223359999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeecCCcccCccccccccCCCCCCC-------CccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 036852 273 GRVIYWDGPRVLGVLAMSRAIGDNYLKP-------YVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLR 345 (408)
Q Consensus 273 G~v~~~~~~r~~~~~~ltRaiGd~~~k~-------~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~ 345 (408)
|.+. ..++++.+.+||+|||+.+|. .++++|+|..+.+...++|||||||||||+|++++++++++..+.
T Consensus 221 g~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 221 GYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred Ccee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 9885 357788889999999987753 367899999999666667788999999999999999999876654
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852 346 GKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK 405 (408)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~ 405 (408)
.. ..++++|+.|++.|+.+|+.||||||||+|..
T Consensus 298 ~~--------------------------~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~ 331 (365)
T PLN03145 298 EH--------------------------NDPVMCSKELVDEALKRKSGDNLAVVVVCFQS 331 (365)
T ss_pred cC--------------------------CCHHHHHHHHHHHHHhCCCCCCEEEEEEEeec
Confidence 32 23478899999999999999999999999976
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-45 Score=336.09 Aligned_cols=255 Identities=39% Similarity=0.586 Sum_probs=206.9
Q ss_pred CCCCCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh----hhhHHh--
Q 036852 117 LDPNSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL----RSFTRM-- 190 (408)
Q Consensus 117 ~~~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~----~~~~~~-- 190 (408)
....+.++||.+|++|+|-.|||++....... +...++.||||||||.|+++|.+|+++|.+. ..|..+
T Consensus 16 ~G~GNglryg~SSMQGWR~eMEDah~A~~~l~-----~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k 90 (379)
T KOG0697|consen 16 EGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLP-----SPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTK 90 (379)
T ss_pred cCcCCceeeeeccccchhhhhhhhhhhhhcCC-----CCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhcc
Confidence 34678999999999999999999998755442 3345889999999999999999999988765 333321
Q ss_pred -------HHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHH
Q 036852 191 -------DKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPD 263 (408)
Q Consensus 191 -------~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~ 263 (408)
.+.+......+-.-............++|||++++++.+.++|++|+||||++++|+|+.+.-|.||+|.+|.
T Consensus 91 ~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~ 170 (379)
T KOG0697|consen 91 NGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPK 170 (379)
T ss_pred CCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChH
Confidence 1111111110000000001111234458999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeecCCcccCccccccccCCCCCC---------CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHH
Q 036852 264 ELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNE 334 (408)
Q Consensus 264 e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k---------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ 334 (408)
|..||..+||.|+. .|++|.++++|+|||+.+| ..|+++|+|.......+++||||++|||||+++++
T Consensus 171 EkeRIqnAGGSVMI---qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtne 247 (379)
T KOG0697|consen 171 EKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNE 247 (379)
T ss_pred HHHHHhcCCCeEEE---EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccH
Confidence 99999999999874 6899999999999999988 36899999999998999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852 335 TACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK 405 (408)
Q Consensus 335 ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~ 405 (408)
|+|++++..+.- ......++..+++..|-+|++||+|+|+|-|..
T Consensus 248 elcefv~sRl~V--------------------------t~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~ 292 (379)
T KOG0697|consen 248 ELCEFVKSRLEV--------------------------TSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPG 292 (379)
T ss_pred HHHHHHHhhhee--------------------------cccHHHHHHHHHHHHHhccCccCceEEEEecCC
Confidence 999999865543 344567778899999999999999999998854
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=350.90 Aligned_cols=255 Identities=42% Similarity=0.602 Sum_probs=202.4
Q ss_pred CCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh----hhhHH----hHHH
Q 036852 122 NPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL----RSFTR----MDKE 193 (408)
Q Consensus 122 ~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~----~~~~~----~~~~ 193 (408)
....+.++.+|+|..|||++...+.+..... ......+||||||||||+.+|+|+.++|+.. ..+.. ....
T Consensus 39 ~~~~~~~~~~~~r~~med~~~~~~~~~~~~~-~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a 117 (330)
T KOG0698|consen 39 YRLGSLLSIRGRRRKMEDRHVQLPDFLEEDV-GGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDA 117 (330)
T ss_pred ccceEEEecCCCCCccCcceeeccccccccc-CCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHH
Confidence 3345555888989999999998876532111 1112579999999999999999999999876 11111 1112
Q ss_pred HHhhhh-hhHHHhhhhhhcCCCCCCCCcceEEEEEeCC-EEEEEEecCCeeEEEeCC-eeeccCCCCCCCCHHHHHHHHH
Q 036852 194 VNEFNE-GVVKATCRCELQTPECDAVGSTAVVAIVTPD-KIVIANCGDSRAVLCRNG-KALPLSSDHKPDRPDELNRIQE 270 (408)
Q Consensus 194 l~~~~~-~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~-~l~vanvGDSR~yl~r~g-~~~~LT~DHs~~~~~e~~ri~~ 270 (408)
+..... ........ .......+|||++++++.++ ++|+||+||||+++++.| ..++||.||+|++++|+.||.+
T Consensus 118 ~~~~F~~~~D~~~~~---~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~ 194 (330)
T KOG0698|consen 118 LRRAFLTKTDSEFLE---KREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEA 194 (330)
T ss_pred HHHHHHHHHHHHHHh---hccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHH
Confidence 222111 01111110 01223567888888888865 999999999999999865 8999999999999999999999
Q ss_pred cCCeEEeecC-CcccCccccccccCCCCCC-CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCC
Q 036852 271 AGGRVIYWDG-PRVLGVLAMSRAIGDNYLK-PYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKG 348 (408)
Q Consensus 271 ~GG~v~~~~~-~r~~~~~~ltRaiGd~~~k-~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~ 348 (408)
+||+|..+.. +|++|.++++|+|||..+| +.|+++|++....+...++||||+||||||+|+++|++++++.++.
T Consensus 195 ~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~--- 271 (330)
T KOG0698|consen 195 AGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELA--- 271 (330)
T ss_pred cCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhh---
Confidence 9999998775 7999999999999999999 8899999999999788899999999999999999999999997761
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852 349 RAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA 406 (408)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~ 406 (408)
....+..++..|...|+.+++.||+|||||.|...
T Consensus 272 -----------------------~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~ 306 (330)
T KOG0698|consen 272 -----------------------SISSPLAAAKLLATEALSRGSKDNITVVVVRLKSS 306 (330)
T ss_pred -----------------------ccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCc
Confidence 23446788999999999999999999999999865
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=2.3e-43 Score=352.95 Aligned_cols=243 Identities=31% Similarity=0.438 Sum_probs=192.9
Q ss_pred CCCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHhh-h--hHHhHHHHH
Q 036852 119 PNSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHELR-S--FTRMDKEVN 195 (408)
Q Consensus 119 ~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~~-~--~~~~~~~l~ 195 (408)
.+..+.||.++++|.|++|||++++.... ...+|||||||||..+|++++++|+..- . .......+.
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~~----------~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~~~~~l~ 87 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLTD----------DWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPMTDERME 87 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccCC----------CceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 57889999999999999999998765321 3479999999999999999999887541 0 000111222
Q ss_pred hhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe-CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCe
Q 036852 196 EFNEGVVKATCRCELQTPECDAVGSTAVVAIVT-PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGR 274 (408)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~-~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~ 274 (408)
.....+..... ... ..+|||++++++. ++++|++||||||+|++|+|++++||+||++.++.|..||.+.||.
T Consensus 88 ~a~~~~d~~i~----~~~--~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~ 161 (381)
T PTZ00224 88 ELCLEIDEEWM----DSG--REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGR 161 (381)
T ss_pred HHHHHHHHHHH----hcc--cCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCE
Confidence 22222222211 111 1358999988876 5799999999999999999999999999999999999999999998
Q ss_pred EEeecCCcccCccccccccCCCCCC---------CCccCCCeEEEEeccCCCCEEEEEcCCCCC-CCCHHHHHHHHHHHh
Q 036852 275 VIYWDGPRVLGVLAMSRAIGDNYLK---------PYVSCEPEVTVVDRTAADDCLILATDGLWD-VVSNETACGVARMCL 344 (408)
Q Consensus 275 v~~~~~~r~~~~~~ltRaiGd~~~k---------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd-~ls~~ei~~iv~~~~ 344 (408)
+.. .|+.+.+.+||+|||..+| +.|++.|+|..+. ..++|+|||||||||| +|++++|.+++...+
T Consensus 162 v~~---~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~-l~~~D~llLaSDGL~d~~ls~eEi~~iv~~~l 237 (381)
T PTZ00224 162 VVS---NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLT-CQSNDFIILACDGVFEGNFSNEEVVAFVKEQL 237 (381)
T ss_pred ecc---ccccCceeeecccCCcccccccccccccCcceeeeEEEEEE-CCCCCEEEEECCCcCcCccCHHHHHHHHHHHH
Confidence 853 5788889999999997543 3467899999988 6689999999999999 899999999997544
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCC
Q 036852 345 RGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKAA 407 (408)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~~ 407 (408)
... ..++++|..|+++|+.+|+.||||||||+|....
T Consensus 238 ~~~--------------------------~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 238 ETC--------------------------DDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred hcC--------------------------CCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 321 2357889999999999999999999999997653
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=8.6e-43 Score=333.34 Aligned_cols=241 Identities=43% Similarity=0.657 Sum_probs=184.7
Q ss_pred eEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh----hhhH---HhHHHHHh
Q 036852 124 KYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL----RSFT---RMDKEVNE 196 (408)
Q Consensus 124 ~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~----~~~~---~~~~~l~~ 196 (408)
.||+++.+|.|..|||++++..++... .......+|+|||||||..++.++++.++.. ..+. .+.+.+..
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~---~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~ 77 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN---SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQ 77 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC---TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc---CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccc
Confidence 478999999999999999998755311 1123679999999999999999999999854 1111 22233333
Q ss_pred hhhh-hHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeee-ccCCCCCCCCHHHHHHHHHcCCe
Q 036852 197 FNEG-VVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKAL-PLSSDHKPDRPDELNRIQEAGGR 274 (408)
Q Consensus 197 ~~~~-~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~-~LT~DHs~~~~~e~~ri~~~GG~ 274 (408)
.... ............ ....+|||++++++.++++|+|||||||+|+++++... +||.||+|.++.|..||.++||.
T Consensus 78 a~~~~~~~~~~~~~~~~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~ 156 (254)
T PF00481_consen 78 AFLAFTDESLYSDSENN-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGR 156 (254)
T ss_dssp HHHHHHHHHHHHHHHHH-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-G
T ss_pred eeeeccccccccccccc-ccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeeccccc
Confidence 3222 111111100001 44568999999999999999999999999999999888 99999999999999999999999
Q ss_pred EEeecCCcccCccccccccCCCCCCC----CccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCC
Q 036852 275 VIYWDGPRVLGVLAMSRAIGDNYLKP----YVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRA 350 (408)
Q Consensus 275 v~~~~~~r~~~~~~ltRaiGd~~~k~----~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~ 350 (408)
+.. ..|+.+.+++||+|||..+|+ .|+++|+|..+++...++|||||||||||+|++++++++++......
T Consensus 157 v~~--~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~--- 231 (254)
T PF00481_consen 157 VSE--NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSG--- 231 (254)
T ss_dssp EEE--TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHH---
T ss_pred ccc--chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcC---
Confidence 875 678999999999999999998 89999999999977776799999999999999999999999766531
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCe
Q 036852 351 PLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNV 396 (408)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNi 396 (408)
..++.+|+.|+++|+.+|+.|||
T Consensus 232 -----------------------~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 232 -----------------------RSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp -----------------------SHHHHHHHHHHHHHHHTTHHSHE
T ss_pred -----------------------CcHHHHHHHHHHHHHhcCCCCCC
Confidence 14688999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=326.46 Aligned_cols=237 Identities=29% Similarity=0.375 Sum_probs=181.7
Q ss_pred CCCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--hhhHH--------
Q 036852 121 SNPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL--RSFTR-------- 189 (408)
Q Consensus 121 ~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~~~-------- 189 (408)
..+.++..++.|. |.+|||++++..+. .... ..||+|||||||+.+++++++.+... +.|..
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~------~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~ 78 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNE------NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNE 78 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeecccc------CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccch
Confidence 3445555566665 88999999987632 1112 47999999999999999999888765 22221
Q ss_pred -hHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHH
Q 036852 190 -MDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRI 268 (408)
Q Consensus 190 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri 268 (408)
..+.+.+....+...............+||||++++++.++++|+|||||||+|++|+|.+++||.||++.+..+..++
T Consensus 79 ~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~ 158 (262)
T COG0631 79 SLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGI 158 (262)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcC
Confidence 2333434333333333333223355678999999999999999999999999999999999999999996655555554
Q ss_pred HHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCC
Q 036852 269 QEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKG 348 (408)
Q Consensus 269 ~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~ 348 (408)
+..++ ...++.++++||+||+... ..|++.... ..++|+||||||||||.+++++|+++++.
T Consensus 159 ~~~~~------~~~~~~~~~ltralG~~~~-----~~p~~~~~~-~~~~d~llL~SDGl~d~v~~~~i~~il~~------ 220 (262)
T COG0631 159 ITPEE------ARSHPRRNALTRALGDFDL-----LEPDITELE-LEPGDFLLLCSDGLWDVVSDDEIVDILKN------ 220 (262)
T ss_pred CCHHH------HHhCccchhhhhhcCCCcc-----cceeEEEEE-cCCCCEEEEECCCCccCcCHHHHHHHHhc------
Confidence 44332 2245667899999998764 379999998 66679999999999999999999999972
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852 349 RAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA 406 (408)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~ 406 (408)
...+++++..|++.|+.+|+.||+|+|+|++...
T Consensus 221 ------------------------~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~ 254 (262)
T COG0631 221 ------------------------SETPQEAADKLIELALEGGGPDNITVVLVRLNGE 254 (262)
T ss_pred ------------------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeecc
Confidence 3456899999999999999999999999998753
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.5e-36 Score=285.84 Aligned_cols=244 Identities=44% Similarity=0.626 Sum_probs=193.3
Q ss_pred CeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--hhhH--------HhHH
Q 036852 123 PKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL--RSFT--------RMDK 192 (408)
Q Consensus 123 ~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~~--------~~~~ 192 (408)
+.++.++..|.|..|||++++...... .+..+|+|||||||+..+.++++.+... ..+. .+..
T Consensus 1 ~~~~~~~~~g~r~~neD~~~~~~~~~~-------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~ 73 (254)
T cd00143 1 FSAGVSDKGGDRKTNEDAVVIKPNLNN-------EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEE 73 (254)
T ss_pred CceeeecCCCCCCCCcceEEEeccCCC-------CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHH
Confidence 357888999999999999998653311 1458999999999999988888877654 1111 1222
Q ss_pred HHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcC
Q 036852 193 EVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAG 272 (408)
Q Consensus 193 ~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~G 272 (408)
.+......+................+|||++++++.++.++++|+||||+|++++++++++|.||++.++.+..++...+
T Consensus 74 ~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~ 153 (254)
T cd00143 74 ALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAG 153 (254)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcC
Confidence 33333333322222222222345679999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 036852 273 GRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPL 352 (408)
Q Consensus 273 G~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~ 352 (408)
|.+. ..++++.+.+||+||+..+|+.+...|++....+.+++|+|||||||||+++++++|.+++......
T Consensus 154 ~~~~---~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~------ 224 (254)
T cd00143 154 GRVS---NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK------ 224 (254)
T ss_pred CcEE---eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcc------
Confidence 8654 3466788999999999988877788999999885489999999999999999999999999753210
Q ss_pred CCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 036852 353 AATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDL 403 (408)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l 403 (408)
..++++|+.|++.|..+++.||+|+||+++
T Consensus 225 ---------------------~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 225 ---------------------EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred ---------------------cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 135789999999999999999999999975
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.5e-36 Score=286.78 Aligned_cols=243 Identities=47% Similarity=0.674 Sum_probs=194.5
Q ss_pred CCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhH--------HhH
Q 036852 121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFT--------RMD 191 (408)
Q Consensus 121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~--------~~~ 191 (408)
..+.+|+++.+|.|..|||++++..... ....+|+|||||||..++.++++.+... ..+. ...
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~~--------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDLS--------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVE 75 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccCC--------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Confidence 4577888899999999999998865421 1458999999999999999999988765 1110 122
Q ss_pred HHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHc
Q 036852 192 KEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEA 271 (408)
Q Consensus 192 ~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~ 271 (408)
+.+......+................+|||++++++.++++|++|+||||+|++|++++.+||.||++.++.+..++...
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~ 155 (255)
T smart00332 76 EALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAA 155 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHc
Confidence 22333333222222222222223456999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCC
Q 036852 272 GGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAP 351 (408)
Q Consensus 272 GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~ 351 (408)
++.+.. .++++.+.+||++|+...++.++..|++...++..++|+|||||||||++|+++++.+++......
T Consensus 156 ~~~~~~---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~----- 227 (255)
T smart00332 156 GGFVIN---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSK----- 227 (255)
T ss_pred CCEEEC---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhc-----
Confidence 987652 377888999999999988898889999999886589999999999999999999999999754321
Q ss_pred CCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 036852 352 LAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVV 401 (408)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV 401 (408)
..+.++|..|++.|..+++.||+|+|||
T Consensus 228 ----------------------~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 228 ----------------------SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred ----------------------CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 1247889999999999999999999986
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=6.8e-37 Score=322.25 Aligned_cols=246 Identities=20% Similarity=0.219 Sum_probs=168.5
Q ss_pred CCeEEEeecCCC-CCCceeeEeccCCccccc--ccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--hhhHH-------
Q 036852 122 NPKYGVSSVCGR-RRDMEDAVAVHPSFFRQN--FETAADELHYFGVYDGHGCSHVAMRCRERLHEL--RSFTR------- 189 (408)
Q Consensus 122 ~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~--~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~~~------- 189 (408)
.+.++..|+.|. |++|||++.+........ .........+|+|||||||+.+++.+++.+.+. ..|..
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~ 453 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELP 453 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhccccc
Confidence 477888999997 899999987754321100 000012357999999999998776666544332 11111
Q ss_pred hHHHHHhhhhhhHHHhhhhhhcCC--CCCCCCcceEEEEEeCCEEEEEEecCCeeEEE-eCCeeeccCCCCCCCCHHHHH
Q 036852 190 MDKEVNEFNEGVVKATCRCELQTP--ECDAVGSTAVVAIVTPDKIVIANCGDSRAVLC-RNGKALPLSSDHKPDRPDELN 266 (408)
Q Consensus 190 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~-r~g~~~~LT~DHs~~~~~e~~ 266 (408)
..+.+......++...+....+.. ...+||||++++++.++++|++||||||+|++ |+|++++||+||+ ..+
T Consensus 454 ~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs-----~~~ 528 (645)
T PRK14559 454 DEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHE-----VGQ 528 (645)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCC-----HHH
Confidence 011233333333333222111222 44579999999999999999999999999998 5789999999999 456
Q ss_pred HHHHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCC--CCHHHHHHHHHHHh
Q 036852 267 RIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDV--VSNETACGVARMCL 344 (408)
Q Consensus 267 ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~--ls~~ei~~iv~~~~ 344 (408)
++++.| +.......+++++.+||+||+...+. .+|++..+. ..+||+||||||||||+ +.+ .+.+.+...+
T Consensus 529 ~lv~~G--i~~~~a~~~p~~~~LTrALG~~~~~~---l~Pdi~~~~-L~~gD~lLLCSDGL~D~~~ve~-~~~~~l~~il 601 (645)
T PRK14559 529 REIQRG--VEPQIAYARPDAYQLTQALGPRDNSA---IQPDIQFLE-IEEDTLLLLCSDGLSDNDLLET-HWQTHLLPLL 601 (645)
T ss_pred HHHHhC--CCHHHHhcCcccceeeeccCCCCCCc---ccceEEEEE-cCCCCEEEEECCCCCCCcccch-HHHHHHHHHH
Confidence 677776 33333345678899999999765332 379999888 56799999999999994 443 2222222222
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852 345 RGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK 405 (408)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~ 405 (408)
.. ...+.++++.|++.|+.+|++||||||||+++.
T Consensus 602 ~~--------------------------~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~ 636 (645)
T PRK14559 602 SS--------------------------SANLDQGLNKLIDLANQYNGHDNITAILVRLKV 636 (645)
T ss_pred hc--------------------------CCCHHHHHHHHHHHHHHcCCCCcEEEEEEEecc
Confidence 21 224578899999999999999999999999974
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=293.77 Aligned_cols=162 Identities=38% Similarity=0.623 Sum_probs=147.1
Q ss_pred CCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCC
Q 036852 217 AVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDN 296 (408)
Q Consensus 217 ~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~ 296 (408)
.+|||++|+++.+++|||||.||||+++.|+|+.+-+|.||+|.++.|..||+.+||+|.. ..|++|.+.|+|+|||.
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~GDH 406 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAFGDH 406 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhhhhh
Confidence 4799999999999999999999999999999999999999999999999999999999974 47999999999999998
Q ss_pred CCC---------CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q 036852 297 YLK---------PYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNG 367 (408)
Q Consensus 297 ~~k---------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (408)
.+| .+|++-|||.+..++.+++|+||++||||++|+-++++++|+..+..+
T Consensus 407 aYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n-------------------- 466 (542)
T KOG0699|consen 407 AYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKN-------------------- 466 (542)
T ss_pred hhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcC--------------------
Confidence 877 358899999999999999999999999999999999999999877653
Q ss_pred CCCCccchHHHHHHHHHHHHHhCC------CCCCeEEEEEEecCC
Q 036852 368 SGETTDKCCSDASLLLTKLALARH------STDNVSVVVVDLRKA 406 (408)
Q Consensus 368 ~~~~~~~~~~~aA~~L~~~Al~~g------s~DNiTvIVV~l~~~ 406 (408)
..+..++..|.+..|+-. +-||+|||++.|++.
T Consensus 467 ------~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 467 ------SSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred ------chHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 345778888999988732 569999999999874
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-32 Score=267.18 Aligned_cols=210 Identities=34% Similarity=0.525 Sum_probs=163.6
Q ss_pred CceEEEEEeCCCCcHHHHHHHHHHHHhhh-------------hHHh--------------------------HHHHHhhh
Q 036852 158 ELHYFGVYDGHGCSHVAMRCRERLHELRS-------------FTRM--------------------------DKEVNEFN 198 (408)
Q Consensus 158 ~~~lfaVaDGhGG~~~a~~a~~~l~~~~~-------------~~~~--------------------------~~~l~~~~ 198 (408)
.+.|+||||||||..++++++++|..+-. |... .+.+..+.
T Consensus 98 ~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af 177 (390)
T KOG0700|consen 98 GWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAF 177 (390)
T ss_pred CeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHH
Confidence 66899999999999999999998866411 1111 11111111
Q ss_pred hhhH----HHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEe---CC---eeeccCCCCCCCCHHHHHHH
Q 036852 199 EGVV----KATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCR---NG---KALPLSSDHKPDRPDELNRI 268 (408)
Q Consensus 199 ~~~~----~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r---~g---~~~~LT~DHs~~~~~e~~ri 268 (408)
.... ...-......++...+|+|+++.++.++.+||||+||||++|.+ +| ..+|||.||+.++++|+.||
T Consensus 178 ~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Ri 257 (390)
T KOG0700|consen 178 EATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRI 257 (390)
T ss_pred HHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHH
Confidence 1111 11112223446677899999999999999999999999999964 33 46899999999999999999
Q ss_pred HHcCC---eEEeecCCcccCccccccccCCCCCC---------------------CCccCCCeEEEEeccCCCCEEEEEc
Q 036852 269 QEAGG---RVIYWDGPRVLGVLAMSRAIGDNYLK---------------------PYVSCEPEVTVVDRTAADDCLILAT 324 (408)
Q Consensus 269 ~~~GG---~v~~~~~~r~~~~~~ltRaiGd~~~k---------------------~~v~~~Pdi~~~~~~~~gd~lIL~S 324 (408)
+..+- .+.....+|+.|.+.+||+|||.++| |+++++|.|+...+...+.||||+|
T Consensus 258 r~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlAS 337 (390)
T KOG0700|consen 258 RSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILAS 337 (390)
T ss_pred HHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEec
Confidence 99884 33344457999999999999998877 7899999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCC
Q 036852 325 DGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHST 393 (408)
Q Consensus 325 DGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~ 393 (408)
||||++|+++|++.+|..++....+. +.+|+.|++.|+.+..+
T Consensus 338 DGLwE~lsNeeaV~lV~~~i~~~~pd--------------------------~~~A~hLIr~aL~~aak 380 (390)
T KOG0700|consen 338 DGLWEYLSNEEAVSLVHEFISGKFPD--------------------------GNPATHLIRHALGRAAK 380 (390)
T ss_pred cchhhhcChHHHHHHHHHhhccCCCC--------------------------CCHHHHHHHHHHhhhhh
Confidence 99999999999999999876542221 46788999999877643
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-25 Score=211.84 Aligned_cols=167 Identities=42% Similarity=0.614 Sum_probs=128.8
Q ss_pred CCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcC--------C---------------
Q 036852 217 AVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAG--------G--------------- 273 (408)
Q Consensus 217 ~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~G--------G--------------- 273 (408)
.+|||+++++.--+++|++|.||||++++|++++++||++.+|.. |++|++..+ +
T Consensus 245 ~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~d 322 (493)
T KOG1323|consen 245 PGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELAFRNPELLGNEFTRLEFPRRLTIKD 322 (493)
T ss_pred CCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHhhcChHhhcccccceecccccChhh
Confidence 379999999999999999999999999999999999999999864 667765543 1
Q ss_pred ---eEEee--------------------------cCCcccCccccccccCCCCC---------CCCccCCCeEEEEeccC
Q 036852 274 ---RVIYW--------------------------DGPRVLGVLAMSRAIGDNYL---------KPYVSCEPEVTVVDRTA 315 (408)
Q Consensus 274 ---~v~~~--------------------------~~~r~~~~~~ltRaiGd~~~---------k~~v~~~Pdi~~~~~~~ 315 (408)
++.+. ..+|+...+.+||-|||..+ ||++++.|+|+++++.+
T Consensus 323 LgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q 402 (493)
T KOG1323|consen 323 LGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQ 402 (493)
T ss_pred hcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhh
Confidence 11110 12345567889999999654 58999999999988654
Q ss_pred ----CCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh--
Q 036852 316 ----ADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALA-- 389 (408)
Q Consensus 316 ----~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~-- 389 (408)
.+|++||+||||||+++++++..+++..+....+. -..-...+|+.|+..|..
T Consensus 403 ~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~---------------------Dp~RYt~aaqdlva~arg~~ 461 (493)
T KOG1323|consen 403 YEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPA---------------------DPSRYTQAAQDLVAAARGQQ 461 (493)
T ss_pred hccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCC---------------------ChhHHHHHHHHHHHHhcCcc
Confidence 78999999999999999999999999887654322 111223456667766632
Q ss_pred -----------CCCCCCeEEEEEEecCC
Q 036852 390 -----------RHSTDNVSVVVVDLRKA 406 (408)
Q Consensus 390 -----------~gs~DNiTvIVV~l~~~ 406 (408)
-|+-|+|||.||-|...
T Consensus 462 k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 462 KDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred CCCceeccCCCcCCCCceEEEEEeccCC
Confidence 24779999999988654
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=5.1e-22 Score=188.59 Aligned_cols=171 Identities=24% Similarity=0.215 Sum_probs=111.9
Q ss_pred CCceeeEeccCCcccccccccccCceEEEEEeCCCCcH-----HHHHHHHHHHHhhhh-HHhHHHHHhhhhhhHHHhhhh
Q 036852 135 RDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSH-----VAMRCRERLHELRSF-TRMDKEVNEFNEGVVKATCRC 208 (408)
Q Consensus 135 ~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~-----~a~~a~~~l~~~~~~-~~~~~~l~~~~~~~~~~~~~~ 208 (408)
+.-||++++..+. ...+.|||||+|||. .+.|..+.|...... ...+.... -...++...+.+
T Consensus 89 ~~GEDa~Fvss~~----------~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~-~P~~lL~~ay~~ 157 (330)
T KOG1379|consen 89 KGGEDAWFVSSNP----------HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPS-DPVNLLEKAYAE 157 (330)
T ss_pred CCCCcceeeccCc----------ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCC-ChHHHHHHHHHH
Confidence 4678999997643 447999999999986 567766666544111 00000000 011111122222
Q ss_pred hhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCc
Q 036852 209 ELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGV 286 (408)
Q Consensus 209 ~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~ 286 (408)
..+.....-++||+++++++ +++||++|+|||...++|+|++++-|..+... ++-.
T Consensus 158 l~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~----------------------FN~P 215 (330)
T KOG1379|consen 158 LKSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHY----------------------FNTP 215 (330)
T ss_pred HhhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheec----------------------cCCc
Confidence 22333333478999999998 88999999999999999999999998766521 1111
Q ss_pred cccc-------cccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 036852 287 LAMS-------RAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLR 345 (408)
Q Consensus 287 ~~lt-------RaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~ 345 (408)
++|+ .+++|. | ...+++.++ .++||+|||+||||||+|.+++|..++.....
T Consensus 216 yQLs~~p~~~~~~~~d~---p---~~ad~~~~~-v~~GDvIilATDGlfDNl~e~~Il~il~~~~~ 274 (330)
T KOG1379|consen 216 YQLSSPPEGYSSYISDV---P---DSADVTSFD-VQKGDVIILATDGLFDNLPEKEILSILKGLDA 274 (330)
T ss_pred eeeccCCccccccccCC---c---cccceEEEe-ccCCCEEEEecccccccccHHHHHHHHHHhhc
Confidence 1221 223321 1 134567777 89999999999999999999999999986554
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=2.5e-19 Score=189.67 Aligned_cols=238 Identities=30% Similarity=0.401 Sum_probs=181.5
Q ss_pred CCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh---------hhhHHhH
Q 036852 121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL---------RSFTRMD 191 (408)
Q Consensus 121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~---------~~~~~~~ 191 (408)
.-|.||++...|.|..+--+.....++... ....||++||-+-......+...+..+ ..-..|.
T Consensus 520 ~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~-------~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr 592 (1081)
T KOG0618|consen 520 FLWTYGVAGVSGQRNKVCSRAVWVENFFLN-------PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMR 592 (1081)
T ss_pred eheeeccchhcccccchhhhhhhhhhcccC-------CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 357799999999998776665544444222 348999999999887776666665554 0001122
Q ss_pred HHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCC--------EEEEEEecCCeeEEEeCCeeeccCCCC-CCCCH
Q 036852 192 KEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPD--------KIVIANCGDSRAVLCRNGKALPLSSDH-KPDRP 262 (408)
Q Consensus 192 ~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~--------~l~vanvGDSR~yl~r~g~~~~LT~DH-s~~~~ 262 (408)
..+.....++ .. .....|..++.+.+..+ ++.+||+|+|.++++++|+..++|+-. ...++
T Consensus 593 ~~fl~~~rkl---------g~-~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~ 662 (1081)
T KOG0618|consen 593 NTFLRLNRKL---------GE-EGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDR 662 (1081)
T ss_pred HHHHHHhhhh---------hh-hhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCH
Confidence 2221111111 11 11223555555555443 689999999999999999999998765 44489
Q ss_pred HHHHHHHHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHH
Q 036852 263 DELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARM 342 (408)
Q Consensus 263 ~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~ 342 (408)
+|.+||+..+|.+. +++.++|+...||++|.+...|.|-+.|+|....+.+.+++||+++-+||++|+-+++++++++
T Consensus 663 eE~~RI~~~~g~i~--ed~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn 740 (1081)
T KOG0618|consen 663 EEYKRIVDSKGFIT--EDNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRN 740 (1081)
T ss_pred HHHHHHHHhcCeec--CCCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhc
Confidence 99999999999886 4778999999999999999999999999999999999999999999999999999999999983
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCC
Q 036852 343 CLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKAA 407 (408)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~~ 407 (408)
. .++--||++|+++|...|..||++|+||++....
T Consensus 741 ~------------------------------~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 741 V------------------------------EDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred C------------------------------CchHHHHHHHHHHHHhcccccCeeEEEEEeecch
Confidence 1 1235689999999999999999999999997653
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.79 E-value=1.2e-18 Score=161.66 Aligned_cols=178 Identities=21% Similarity=0.326 Sum_probs=91.1
Q ss_pred eecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHH----HHHHHh------hhhHH-hHHHHHh
Q 036852 128 SSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCR----ERLHEL------RSFTR-MDKEVNE 196 (408)
Q Consensus 128 ~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~----~~l~~~------~~~~~-~~~~l~~ 196 (408)
.++.|.|..|||++.+.... +..+++|+||+||...+..++ +.+... ..... ....+..
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~----------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~ 72 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD----------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRA 72 (212)
T ss_dssp ----TTSSS--EEEEEE-TC----------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC----------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 47889999999999865432 446779999999876554444 333322 00001 1111111
Q ss_pred hhhhhHHHh---hhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEE-EeCCeeeccCCCCCCCCHHHHHHHHHcC
Q 036852 197 FNEGVVKAT---CRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVL-CRNGKALPLSSDHKPDRPDELNRIQEAG 272 (408)
Q Consensus 197 ~~~~~~~~~---~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl-~r~g~~~~LT~DHs~~~~~e~~ri~~~G 272 (408)
....+.... ............++||++++++.++.++++|+||||+|+ .++|++..++.||+. +...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~~----- 143 (212)
T PF13672_consen 73 IKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYPN----- 143 (212)
T ss_dssp HHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHHH-----
T ss_pred HHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhhh-----
Confidence 111111100 001112234556899999999999999999999999975 589999999999981 1110
Q ss_pred CeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHH-HHHHHHHHhh
Q 036852 273 GRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNET-ACGVARMCLR 345 (408)
Q Consensus 273 G~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~e-i~~iv~~~~~ 345 (408)
.+..+......+ ..++..+. ..+++.|||||||||+.|...+ +..++.+..+
T Consensus 144 ----------------~~~~~~~~~~~~----~~~~~~~~-~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~~~ 196 (212)
T PF13672_consen 144 ----------------QTRSLTGDDPEP----DVQYGSIP-LEEGDVILLCSDGVWDNLRSYEDLEQFLKDLWN 196 (212)
T ss_dssp ----------------CTTSCCHHCCCT----ETEEEEEE---TT-EEEEE-HHHHTTS-HHHHHHHH------
T ss_pred ----------------hhhccCcccccc----CCeEEEEE-cCCCCEEEEECcCccccCCCHHHHHHHhhhccc
Confidence 022332211111 23455555 6789999999999999998655 7777765544
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.66 E-value=5.4e-15 Score=135.04 Aligned_cols=156 Identities=19% Similarity=0.134 Sum_probs=101.3
Q ss_pred CCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhHHhHHHHHhhhhhhHHHhhhhhhcCC
Q 036852 135 RDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFTRMDKEVNEFNEGVVKATCRCELQTP 213 (408)
Q Consensus 135 ~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 213 (408)
...-|.+.+.... ....+|+|+||||+...|.+++..+... ..+......+......++.... ..
T Consensus 15 ~~~GD~~~~~~~~---------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~----~~- 80 (193)
T smart00331 15 QVGGDFYDVVKLP---------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIY----EN- 80 (193)
T ss_pred hcCccEEEEEEeC---------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHH----hc-
Confidence 4556776554322 1348999999999877777766655443 1111111112222222222211 11
Q ss_pred CCCCCCcceEEEEE--eCCEEEEEEecCCeeEEEe-CCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccc
Q 036852 214 ECDAVGSTAVVAIV--TPDKIVIANCGDSRAVLCR-NGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMS 290 (408)
Q Consensus 214 ~~~~~GtT~vv~~i--~~~~l~vanvGDSR~yl~r-~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~lt 290 (408)
....+|+|++++++ ..++++++|+||+|+|+++ ++..++++.+.+
T Consensus 81 ~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~-------------------------------- 128 (193)
T smart00331 81 GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG-------------------------------- 128 (193)
T ss_pred CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC--------------------------------
Confidence 23457999999998 5789999999999999999 666666665532
Q ss_pred cccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHH
Q 036852 291 RAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARM 342 (408)
Q Consensus 291 RaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~ 342 (408)
..+|..... .+++..+. ..+||.|+|+|||||+.++.+++.++++.
T Consensus 129 ~~lG~~~~~-----~~~~~~~~-l~~gd~l~l~TDGl~e~~~~~~l~~~l~~ 174 (193)
T smart00331 129 APLGLEPDV-----EVDVRELT-LEPGDLLLLYTDGLTEARNPERLEELLEE 174 (193)
T ss_pred ceeeeCCCC-----cceeEEEe-eCCCCEEEEECCCccccCChHHHHHHHHH
Confidence 345532211 34556665 78899999999999999999999988875
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.46 E-value=3e-12 Score=139.61 Aligned_cols=202 Identities=15% Similarity=0.109 Sum_probs=124.4
Q ss_pred CCCeEEEee-cCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhHHhHHHHHhhh
Q 036852 121 SNPKYGVSS-VCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFTRMDKEVNEFN 198 (408)
Q Consensus 121 ~~~~~g~~s-~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~~~~~~l~~~~ 198 (408)
....+|++. .++.+..+.|.+.+.... . ...+++|+||||....|...+..+.+. ..+....-......
T Consensus 550 ~~~~~g~a~~~k~g~~vsGD~y~~~~l~-~--------g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~~~ai 620 (764)
T TIGR02865 550 YHVSTGVARAAKDGELVSGDSYSFGKLS-A--------GKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDREVAI 620 (764)
T ss_pred eeehhhHHHhcCCCCcccCceEEEEEEC-C--------CEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 344444443 334467889998775422 1 336899999999665555444433322 11111000011111
Q ss_pred hhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEE
Q 036852 199 EGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVI 276 (408)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~ 276 (408)
..++... ... ....+.+|+.+++++ .+++.++|+|+++.|+.|++.+.+++..+-|
T Consensus 621 ~~lN~~L----~~~-~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP----------------- 678 (764)
T TIGR02865 621 KTVNSIL----SLR-STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP----------------- 678 (764)
T ss_pred HHHHHHH----HhC-CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce-----------------
Confidence 1111111 111 123468999999986 5789999999999999999998888754332
Q ss_pred eecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHH-----HHHHHHHHhhcCCCCC
Q 036852 277 YWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNET-----ACGVARMCLRGKGRAP 351 (408)
Q Consensus 277 ~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~e-----i~~iv~~~~~~~~~~~ 351 (408)
+|-. +.+ +++....+ ..+||+|||+||||||..++.+ +.++++..
T Consensus 679 ----------------lGil---~~~--~~~~~~~~-L~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~-------- 728 (764)
T TIGR02865 679 ----------------IGIL---DEV--DVELVRKK-LKNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKET-------- 728 (764)
T ss_pred ----------------eEec---cCC--ccceEEEE-eCCCCEEEEECCCCCcCCcccccHHHHHHHHHHhc--------
Confidence 2210 111 34555555 7899999999999999876533 45555421
Q ss_pred CCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CCCCeEEEEEEe
Q 036852 352 LAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARH---STDNVSVVVVDL 403 (408)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~g---s~DNiTvIVV~l 403 (408)
...+++++++.|++.++... ..||+|++++++
T Consensus 729 --------------------~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 729 --------------------NTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred --------------------CCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 12346788999999987643 479999999987
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.36 E-value=1.2e-10 Score=106.07 Aligned_cols=124 Identities=20% Similarity=0.226 Sum_probs=78.0
Q ss_pred CCCcceEEEEEe--CCEEEEEEecCCeeEEEeCC--eeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccc
Q 036852 217 AVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNG--KALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRA 292 (408)
Q Consensus 217 ~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g--~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRa 292 (408)
...+|++++.++ .+.++++|+|++++++++++ ....+..... .
T Consensus 59 ~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~---------------------------------~ 105 (193)
T PF07228_consen 59 NRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGP---------------------------------P 105 (193)
T ss_dssp STTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSB---------------------------------B
T ss_pred cccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCcc---------------------------------c
Confidence 367888888876 46899999999999999983 3333332222 1
Q ss_pred cCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHH----HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCC
Q 036852 293 IGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETAC----GVARMCLRGKGRAPLAATPGAAPDVSNNNGS 368 (408)
Q Consensus 293 iGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~----~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (408)
+|-..- .......+. .++||.|+|+||||+|....+.-. .++ ..+...
T Consensus 106 lG~~~~-----~~~~~~~~~-l~~gd~l~l~TDGl~e~~~~~~~~~~~~~~~-~~l~~~--------------------- 157 (193)
T PF07228_consen 106 LGIFED-----IDYQEQEIQ-LEPGDRLLLYTDGLFEALNEDGEFFGEERLL-ELLDEN--------------------- 157 (193)
T ss_dssp CSSSCT-----TCEEEEEEE---TTEEEEEECHHHCTTTCHHCHHCCCHHHH-HHHHCH---------------------
T ss_pred eeeecc-----ccccceEEE-eccccEEEEeCCChhhccCCccchhHHHHHH-HHHhhc---------------------
Confidence 442111 133445555 778999999999999998554322 222 122211
Q ss_pred CCCccchHHHHHHHHHHHHHh---CCCCCCeEEEEEEec
Q 036852 369 GETTDKCCSDASLLLTKLALA---RHSTDNVSVVVVDLR 404 (408)
Q Consensus 369 ~~~~~~~~~~aA~~L~~~Al~---~gs~DNiTvIVV~l~ 404 (408)
....+++.+..|.+.+.. ....||+|+|++++.
T Consensus 158 ---~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 158 ---RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp ---TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred ---cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 123457777778888766 357899999999873
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.00 E-value=0.00049 Score=69.49 Aligned_cols=125 Identities=20% Similarity=0.260 Sum_probs=78.6
Q ss_pred CCcceEEEEEeC--CEEEEEEecCCeeEEEeCCee---eccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccc
Q 036852 218 VGSTAVVAIVTP--DKIVIANCGDSRAVLCRNGKA---LPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRA 292 (408)
Q Consensus 218 ~GtT~vv~~i~~--~~l~vanvGDSR~yl~r~g~~---~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRa 292 (408)
+=+|+...+++. ..+.++|+|---.++++.+.. ..|+ .....
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~---------------------------------~~g~p 277 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT---------------------------------ALGLP 277 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc---------------------------------CCCce
Confidence 678888888764 689999999999999986542 2222 11244
Q ss_pred cCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCC-------CCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q 036852 293 IGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWD-------VVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNN 365 (408)
Q Consensus 293 iGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd-------~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (408)
+| +.|.. .+.+.... .++||.++|.|||+.+ .+..+...+++......
T Consensus 278 iG---~~~~~--~~~~~~~~-l~~gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~------------------- 332 (367)
T COG2208 278 IG---LLPDY--QYEVASLQ-LEPGDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQ------------------- 332 (367)
T ss_pred ee---ecCCc--cchheeEE-ecCCCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCC-------------------
Confidence 55 22222 33445555 5679999999999998 56777777777642211
Q ss_pred CCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852 366 NGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK 405 (408)
Q Consensus 366 ~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~ 405 (408)
.+....+.+...|....-.....|++|+|++++..
T Consensus 333 -----~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~~ 367 (367)
T COG2208 333 -----PAEEILEAILESLEELQGDQIQDDDITLLVLKVKK 367 (367)
T ss_pred -----CHHHHHHHHHHHHHHhhCCccccCceEEEEEEecC
Confidence 01222233333334333344566889999999863
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=43.19 E-value=14 Score=28.35 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=16.8
Q ss_pred cCCCCEEEEEcCCCCCCCCHH
Q 036852 314 TAADDCLILATDGLWDVVSNE 334 (408)
Q Consensus 314 ~~~gd~lIL~SDGlwd~ls~~ 334 (408)
...|..||+++||+|=.+...
T Consensus 24 ~~~G~Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 24 ERPGHRLLVASNGVFLEVRRP 44 (72)
T ss_pred ccCCcEEEEecCcEEEEEech
Confidence 458999999999999665444
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=38.35 E-value=3.3e+02 Score=26.45 Aligned_cols=31 Identities=6% Similarity=0.133 Sum_probs=23.0
Q ss_pred cceEEEEEeC--CEEEEEEecCCeeEEEeCCee
Q 036852 220 STAVVAIVTP--DKIVIANCGDSRAVLCRNGKA 250 (408)
Q Consensus 220 tT~vv~~i~~--~~l~vanvGDSR~yl~r~g~~ 250 (408)
-|+..++++. +++.++|.|-...++..++..
T Consensus 227 ~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 227 FPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 5787777764 579999999999885444433
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.18 E-value=62 Score=29.49 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=34.6
Q ss_pred CCEEEEEcCCCC-----------CCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHH
Q 036852 317 DDCLILATDGLW-----------DVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTK 385 (408)
Q Consensus 317 gd~lIL~SDGlw-----------d~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~ 385 (408)
+|-+|..|.|+| |+|.++.+-+.+.. +.+..+.+.+.|+.|++
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~--------------------------g~D~~SIPKevA~qLI~ 124 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNN--------------------------GWDEFSIPKEVARQLID 124 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhc--------------------------CCccccchHHHHHHHHH
Confidence 567888888888 45555555555432 22345667899999999
Q ss_pred HHHhCC
Q 036852 386 LALARH 391 (408)
Q Consensus 386 ~Al~~g 391 (408)
.-..||
T Consensus 125 MHq~RG 130 (237)
T COG3700 125 MHQRRG 130 (237)
T ss_pred HHHhcC
Confidence 998887
No 23
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=33.60 E-value=65 Score=30.69 Aligned_cols=23 Identities=35% Similarity=0.530 Sum_probs=20.0
Q ss_pred EEEEe-CCCCcHHHHHHHHHHHHh
Q 036852 162 FGVYD-GHGCSHVAMRCRERLHEL 184 (408)
Q Consensus 162 faVaD-GhGG~~~a~~a~~~l~~~ 184 (408)
.|||| |+||-.+.+.+.+.++..
T Consensus 1 IgvfDSGiGGltv~~~l~~~~p~~ 24 (251)
T TIGR00067 1 IGVFDSGVGGLSVLKEIRKQLPKE 24 (251)
T ss_pred CEEEeCCccHHHHHHHHHHHCCCC
Confidence 38999 999999999999988654
No 24
>PRK00865 glutamate racemase; Provisional
Probab=32.61 E-value=72 Score=30.50 Aligned_cols=24 Identities=33% Similarity=0.418 Sum_probs=21.1
Q ss_pred EEEEEe-CCCCcHHHHHHHHHHHHh
Q 036852 161 YFGVYD-GHGCSHVAMRCRERLHEL 184 (408)
Q Consensus 161 lfaVaD-GhGG~~~a~~a~~~l~~~ 184 (408)
-.|||| |+||-.+.+.+.+.++..
T Consensus 7 ~IgvfDSGiGGLtvl~~i~~~lp~~ 31 (261)
T PRK00865 7 PIGVFDSGVGGLTVLREIRRLLPDE 31 (261)
T ss_pred eEEEEECCccHHHHHHHHHHHCCCC
Confidence 479999 999999999999988764
No 25
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=22.00 E-value=1.9e+02 Score=17.32 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=16.7
Q ss_pred EEEeCCEEEEEEecCCeeEEE
Q 036852 225 AIVTPDKIVIANCGDSRAVLC 245 (408)
Q Consensus 225 ~~i~~~~l~vanvGDSR~yl~ 245 (408)
++-.++.+||+-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 344788999999999988764
Done!