Query         036852
Match_columns 408
No_of_seqs    296 out of 1593
Neff          7.5 
Searched_HMMs 29240
Date          Mon Mar 25 09:51:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036852.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036852hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3qn1_B Protein phosphatase 2C  100.0 1.6E-48 5.6E-53  386.3  26.8  274  120-406    11-330 (337)
  2 3kdj_B Protein phosphatase 2C  100.0 1.1E-47 3.9E-52  376.8  27.7  282  121-406     7-307 (316)
  3 2p8e_A PPM1B beta isoform vari 100.0 7.5E-47 2.6E-51  369.6  25.0  253  120-406    21-300 (307)
  4 2i0o_A Ser/Thr phosphatase; be 100.0 6.3E-46 2.1E-50  362.5  24.3  250  119-404    19-304 (304)
  5 1a6q_A Phosphatase 2C; catalyt 100.0 9.2E-46 3.1E-50  372.2  25.3  253  120-406    19-294 (382)
  6 2iq1_A Protein phosphatase 2C  100.0 1.8E-45 6.3E-50  354.0  25.8  249  120-407     5-265 (274)
  7 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.1E-44 3.8E-49  362.2  25.3  252  120-406    10-335 (364)
  8 2i44_A Serine-threonine phosph 100.0   3E-44   1E-48  353.3  25.8  251  121-405    20-322 (324)
  9 4da1_A Protein phosphatase 1K, 100.0 6.2E-44 2.1E-48  359.9  24.5  246  121-405   120-377 (389)
 10 3d8k_A PP2C, protein phosphata 100.0 3.8E-44 1.3E-48  359.7  19.8  249  120-406    10-326 (377)
 11 2j4o_A Mitogen-activated prote 100.0 8.3E-44 2.8E-48  360.2  18.7  252  120-406    24-368 (401)
 12 2irm_A Mitogen-activated prote 100.0 2.4E-43 8.3E-48  351.9  19.5  240  128-406    25-358 (358)
 13 2pnq_A [pyruvate dehydrogenase 100.0 2.4E-42 8.3E-47  355.2  20.3  274  124-405    38-456 (467)
 14 2pk0_A Serine/threonine protei 100.0 7.6E-40 2.6E-44  309.6  24.2  235  121-407     4-249 (250)
 15 1txo_A Putative bacterial enzy 100.0 1.3E-39 4.4E-44  305.7  22.8  226  122-405     4-237 (237)
 16 2j82_A TPPHA, protein serine-t 100.0 2.8E-38 9.7E-43  296.9  25.2  227  123-403     1-240 (240)
 17 2jfr_A Ser-Thr phosphatase MSP 100.0 2.1E-37 7.2E-42  290.1  22.5  222  121-403     4-233 (234)
 18 3rnr_A Stage II sporulation E  100.0 1.7E-35 5.9E-40  273.9  13.2  195  158-403     9-211 (211)
 19 3t91_A Stage II sporulation pr  99.8 2.3E-19   8E-24  168.3  16.0  202  120-406     5-222 (242)
 20 3pu9_A Protein serine/threonin  99.8 6.9E-18 2.3E-22  158.9  21.9  199  122-406    10-226 (242)
 21 3f79_A Probable two-component   99.7 4.7E-15 1.6E-19  140.1  18.9  199  121-404    36-253 (255)
 22 3zt9_A Serine phosphatase; hyd  99.6 1.1E-14 3.9E-19  132.2  19.4  186  121-402     2-193 (193)
 23 3ke6_A Protein RV1364C/MT1410;  99.2 4.6E-09 1.6E-13  105.6  23.1  132  217-405   117-258 (399)
 24 3eq2_A Probable two-component   98.2 1.5E-05 5.1E-10   79.2  13.9   78  217-333   264-344 (394)
 25 3ukw_C Bimax1 peptide; arm rep  52.0     2.6 8.8E-05   24.2  -0.3   26   25-57      2-27  (28)
 26 3out_A Glutamate racemase; str  38.3      40  0.0014   31.1   5.4   24  161-184     9-33  (268)
 27 3c4z_A Rhodopsin kinase; Ser/T  35.7    0.81 2.8E-05   47.2  -7.4   78  288-399    43-126 (543)
 28 3ist_A Glutamate racemase; str  32.2      58   0.002   30.0   5.4   24  161-184     7-31  (269)
 29 3uhf_A Glutamate racemase; str  30.6      42  0.0014   31.1   4.2   25  160-184    25-50  (274)
 30 1nbu_A DHNA, probable dihydron  22.0   2E+02  0.0069   22.6   6.3   57  323-406    44-100 (119)

No 1  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=1.6e-48  Score=386.25  Aligned_cols=274  Identities=48%  Similarity=0.778  Sum_probs=212.8

Q ss_pred             CCCCeEEEeecCCCCCCceeeEeccCCccccc------c------cccccCceEEEEEeCCCCcHHHHHHHHHHHHh--h
Q 036852          120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQN------F------ETAADELHYFGVYDGHGCSHVAMRCRERLHEL--R  185 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~------~------~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~  185 (408)
                      +....||.+|++|+|.+|||++++.+++....      +      ........||+|||||||+.++++++++++..  .
T Consensus        11 ~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~   90 (337)
T 3qn1_B           11 DCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAE   90 (337)
T ss_dssp             CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHH
T ss_pred             cccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHH
Confidence            45677999999999999999999876542100      0      00012568999999999999999999988765  1


Q ss_pred             hhH-----------------HhHHHHHhhhhhhHHHhhhhh-----------hcCCCCCCCCcceEEEEEeCCEEEEEEe
Q 036852          186 SFT-----------------RMDKEVNEFNEGVVKATCRCE-----------LQTPECDAVGSTAVVAIVTPDKIVIANC  237 (408)
Q Consensus       186 ~~~-----------------~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~GtT~vv~~i~~~~l~vanv  237 (408)
                      .+.                 .+...+......+........           ........||||++++++.++++|++||
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anv  170 (337)
T 3qn1_B           91 EIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNC  170 (337)
T ss_dssp             HHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEE
T ss_pred             HHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEec
Confidence            111                 112222222222222221111           1123345799999999999999999999


Q ss_pred             cCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCC
Q 036852          238 GDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAAD  317 (408)
Q Consensus       238 GDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~g  317 (408)
                      ||||+|++|+|++++||+||++.++.|..||..+||.+..+.+.++++.+++||+|||..++++++++|++..+.+..++
T Consensus       171 GDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~  250 (337)
T 3qn1_B          171 GDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSRED  250 (337)
T ss_dssp             SSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTE
T ss_pred             cCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999977899


Q ss_pred             CEEEEEcCCCCCCCCHHHHHHHHHHHhhc----CCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCC
Q 036852          318 DCLILATDGLWDVVSNETACGVARMCLRG----KGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHST  393 (408)
Q Consensus       318 d~lIL~SDGlwd~ls~~ei~~iv~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~  393 (408)
                      |+||||||||||+|++++|+++++..+..    ....         +    ...........++++|+.|+++|+.+|+.
T Consensus       251 d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~  317 (337)
T 3qn1_B          251 ECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAP---------P----LAERGKGIDPACQAAADYLSMLALQKGSK  317 (337)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC-----------------CCSSCCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccc---------c----ccccccccChhHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999864311    1000         0    00001112456789999999999999999


Q ss_pred             CCeEEEEEEecCC
Q 036852          394 DNVSVVVVDLRKA  406 (408)
Q Consensus       394 DNiTvIVV~l~~~  406 (408)
                      ||||||||+|+..
T Consensus       318 DNiTvivv~l~~~  330 (337)
T 3qn1_B          318 DNISIIVIDLKAQ  330 (337)
T ss_dssp             SCEEEEEEECCSC
T ss_pred             CCEEEEEEEecCC
Confidence            9999999999764


No 2  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=1.1e-47  Score=376.85  Aligned_cols=282  Identities=48%  Similarity=0.762  Sum_probs=208.9

Q ss_pred             CCCeEEEeecCCCCCCceeeEeccCCccccc-------ccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--hhhHH--
Q 036852          121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQN-------FETAADELHYFGVYDGHGCSHVAMRCRERLHEL--RSFTR--  189 (408)
Q Consensus       121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~-------~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~~~--  189 (408)
                      ..+.||++|++|+|++|||++++.+++....       .........+|+|||||||+.+++++++.++..  ..+..  
T Consensus         7 ~~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~   86 (316)
T 3kdj_B            7 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEK   86 (316)
T ss_dssp             ---CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhh
Confidence            5688999999999999999999876542110       001123568999999999999999999988765  11111  


Q ss_pred             --------hHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCC
Q 036852          190 --------MDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDR  261 (408)
Q Consensus       190 --------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~  261 (408)
                              ..+.+............... .......+|||++++++.++++|++||||||+|++|+|++++||+||++.+
T Consensus        87 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~-~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~  165 (316)
T 3kdj_B           87 PMLSDGDTWLEKWKKALFNSFLRVDSEI-ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDR  165 (316)
T ss_dssp             CCGGGTHHHHHHHHHHHHHHHHHHHHHG-GGTSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTS
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHH-hcccCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCCC
Confidence                    01112222221111111111 122345699999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHH
Q 036852          262 PDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVAR  341 (408)
Q Consensus       262 ~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~  341 (408)
                      +.|..|+...||.+..+...|+++.+.+||+|||..+++.++++|++..+.+..++|+||||||||||+|++++|+++++
T Consensus       166 ~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~  245 (316)
T 3kdj_B          166 EDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMAR  245 (316)
T ss_dssp             HHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHH
Confidence            99999999999999999889999999999999999999999999999999988899999999999999999999999998


Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852          342 MCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA  406 (408)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~  406 (408)
                      ..+..........   ..................++.+|+.|++.|+.+|+.||||||||+|++.
T Consensus       246 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~  307 (316)
T 3kdj_B          246 KRILLWHKKNAVA---GGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPR  307 (316)
T ss_dssp             HHHHHHTTC--------------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC
T ss_pred             HHhhhhccccccc---cccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCC
Confidence            7432110000000   0000000000000124567899999999999999999999999999764


No 3  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=7.5e-47  Score=369.57  Aligned_cols=253  Identities=38%  Similarity=0.529  Sum_probs=197.6

Q ss_pred             CCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-h---hhHH------
Q 036852          120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-R---SFTR------  189 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~---~~~~------  189 (408)
                      +..+.||+++++|+|+.|||++++...+...     .....||+|||||||+.+|+++++.+... .   .|..      
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~-----~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~   95 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPHG-----LEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGS   95 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETTT-----EEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-------
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCCC-----CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccc
Confidence            4789999999999999999999886433110     12458999999999999999999988765 1   2221      


Q ss_pred             --------hHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCC
Q 036852          190 --------MDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDR  261 (408)
Q Consensus       190 --------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~  261 (408)
                              +...+......+...........+....+|||++++++.++++|++||||||+|++|+|++.+||+||++.+
T Consensus        96 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~  175 (307)
T 2p8e_A           96 ALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCN  175 (307)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCC
Confidence                    122232222222222222111223345799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCC---------CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCC
Q 036852          262 PDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVSCEPEVTVVDRTAADDCLILATDGLWDVVS  332 (408)
Q Consensus       262 ~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k---------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls  332 (408)
                      +.|..||..+||.+.   ..|+++.+.+||+|||..+|         ++++++|++..+.+...++|||||||||||+|+
T Consensus       176 ~~E~~rI~~~gg~v~---~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls  252 (307)
T 2p8e_A          176 PREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMS  252 (307)
T ss_dssp             HHHHHHHHHTTCCEE---TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSC
T ss_pred             HHHHHHHHHcCCEEE---eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCC
Confidence            999999999999876   35778889999999998776         457889999999954444589999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852          333 NETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA  406 (408)
Q Consensus       333 ~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~  406 (408)
                      +++|.++++..+..                          ...++++|+.|++.|+.+|+.||||||||++...
T Consensus       253 ~~ei~~~v~~~~~~--------------------------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  300 (307)
T 2p8e_A          253 NEELCEYVKSRLEV--------------------------SDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNE  300 (307)
T ss_dssp             HHHHHHHHHHHHTT--------------------------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC---
T ss_pred             HHHHHHHHHHHHhc--------------------------CCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCC
Confidence            99999999865432                          1245789999999999999999999999999754


No 4  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=6.3e-46  Score=362.50  Aligned_cols=250  Identities=34%  Similarity=0.521  Sum_probs=191.2

Q ss_pred             CCCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-h---hhH--HhHH
Q 036852          119 PNSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-R---SFT--RMDK  192 (408)
Q Consensus       119 ~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~---~~~--~~~~  192 (408)
                      .+..+.||+++++|+|..|||++++...+..        ...+|+|||||||+.++++++++++.. .   .+.  .+.+
T Consensus        19 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~--------~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~   90 (304)
T 2i0o_A           19 SNEFLASGSSSMQGWRISQEDAHNCILNFDD--------QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEK   90 (304)
T ss_dssp             ECSSEEEEEEEEEESSSCCCEEEEEEEEEET--------TEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHH
T ss_pred             CCCceEEEEeecCCCCCCccCEEEEEeccCC--------CeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHH
Confidence            3578999999999999999999987643211        458999999999999999999988765 1   111  1122


Q ss_pred             HHHhhhhhhHHHhhhhh----h----------cCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCC
Q 036852          193 EVNEFNEGVVKATCRCE----L----------QTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHK  258 (408)
Q Consensus       193 ~l~~~~~~~~~~~~~~~----~----------~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs  258 (408)
                      .+......+........    .          .......+|||++++++.++++|++||||||+|++|+|++++||+||+
T Consensus        91 ~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~  170 (304)
T 2i0o_A           91 ALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHK  170 (304)
T ss_dssp             HHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcC
Confidence            22222222222211110    0          111245799999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCCC---------CccCCCeEEEEeccCCCC-EEEEEcCCCC
Q 036852          259 PDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKP---------YVSCEPEVTVVDRTAADD-CLILATDGLW  328 (408)
Q Consensus       259 ~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~---------~v~~~Pdi~~~~~~~~gd-~lIL~SDGlw  328 (408)
                      |.++.|..||..+||.+..  ..|+++.+.+||+|||..+|.         .|+++|++..++ +.++| ||||||||||
T Consensus       171 ~~~~~e~~rI~~~gg~v~~--~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~-l~~~D~fllL~SDGl~  247 (304)
T 2i0o_A          171 PEDTVEYQRIEKAGGRVTL--DGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKIT-VGPEDEFMVLACDGIW  247 (304)
T ss_dssp             TTSHHHHHHHHHTTCCBCT--TSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEE-CCTTEEEEEEECHHHH
T ss_pred             CcCHHHHHHHHhCCCEEEe--CCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEE-cCCCCeEEEEECcCcc
Confidence            9999999999999998753  357888999999999987763         568899999999 44565 6799999999


Q ss_pred             CCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHh------CCCCCCeEEEEEE
Q 036852          329 DVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALA------RHSTDNVSVVVVD  402 (408)
Q Consensus       329 d~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~------~gs~DNiTvIVV~  402 (408)
                      |+|++++|.++++..+...                         ...++++|+.|++.|+.      +++.||||||||+
T Consensus       248 d~l~~~ei~~~v~~~~~~~-------------------------~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~  302 (304)
T 2i0o_A          248 NFMTSEQVVQFVQERINKP-------------------------GMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQ  302 (304)
T ss_dssp             TTCCHHHHHHHHHHHHTST-------------------------TCCHHHHHHHHHHHHC------------CEEEEEEE
T ss_pred             ccCCHHHHHHHHHHHHhhc-------------------------CCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEE
Confidence            9999999999998655431                         23457889999999986      4688999999999


Q ss_pred             ec
Q 036852          403 LR  404 (408)
Q Consensus       403 l~  404 (408)
                      |+
T Consensus       303 ~~  304 (304)
T 2i0o_A          303 FK  304 (304)
T ss_dssp             EC
T ss_pred             eC
Confidence            85


No 5  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=9.2e-46  Score=372.16  Aligned_cols=253  Identities=37%  Similarity=0.543  Sum_probs=203.0

Q ss_pred             CCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHhh----hhHH------
Q 036852          120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHELR----SFTR------  189 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~~----~~~~------  189 (408)
                      ...+.||+++++|+|..|||++++...+...     .....||+|||||||+.+|+++++.++..-    .|..      
T Consensus        19 ~~~l~~g~~s~~G~R~~nEDa~~~~~~~~~~-----~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~   93 (382)
T 1a6q_A           19 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPSG-----LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPS   93 (382)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETTT-----EEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCC
T ss_pred             CCceEEEEEecCCCCCCCCceeEEecCCCCC-----CCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCC
Confidence            4689999999999999999999886543210     124589999999999999999999887641    2221      


Q ss_pred             ---hHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHH
Q 036852          190 ---MDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELN  266 (408)
Q Consensus       190 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~  266 (408)
                         +...+......+...........+....+|||++++++.++++|++||||||+|++|+|++++||.||+|.++.|.+
T Consensus        94 ~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~  173 (382)
T 1a6q_A           94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE  173 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHH
Confidence               12233333333332222222223445679999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeEEeecCCcccCccccccccCCCCCC---------CCccCCCeEEEEecc-CCCCEEEEEcCCCCCCCCHHHH
Q 036852          267 RIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVSCEPEVTVVDRT-AADDCLILATDGLWDVVSNETA  336 (408)
Q Consensus       267 ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k---------~~v~~~Pdi~~~~~~-~~gd~lIL~SDGlwd~ls~~ei  336 (408)
                      ||..+||.+..   .|+++.+.+||+|||..+|         ++|+++|++..+.+. ..++|||||||||||+|++++|
T Consensus       174 RI~~~gg~v~~---~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei  250 (382)
T 1a6q_A          174 RIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEEL  250 (382)
T ss_dssp             HHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHH
T ss_pred             HHHhcCcEEec---ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHH
Confidence            99999998863   5788889999999998776         457889999999966 4578999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852          337 CGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA  406 (408)
Q Consensus       337 ~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~  406 (408)
                      +++++..+..                          ...++++|+.|++.|+.+|+.||||||||+|...
T Consensus       251 ~~~v~~~~~~--------------------------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  294 (382)
T 1a6q_A          251 CDFVRSRLEV--------------------------TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA  294 (382)
T ss_dssp             HHHHHHHHTT--------------------------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred             HHHHHHHHhc--------------------------CCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCC
Confidence            9999865432                          1235788999999999999999999999999753


No 6  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=354.01  Aligned_cols=249  Identities=33%  Similarity=0.467  Sum_probs=196.8

Q ss_pred             CCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhH----HhHHHH
Q 036852          120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFT----RMDKEV  194 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~----~~~~~l  194 (408)
                      ...+.||+.|++|+|+.|||++++....         ....+|+|||||||+.+|+++++.+... ..+.    .+.+.+
T Consensus         5 ~~~~~~g~~s~~G~R~~nED~~~~~~~~---------~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l   75 (274)
T 2iq1_A            5 ISLENVGCASQIGKRKENEDRFDFAQLT---------DEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLL   75 (274)
T ss_dssp             CCGGGCEEEEECCSSSSCCEEEEEEECS---------SSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred             ccCCeEEEEecccCCCCccceEEEeeCC---------CCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHH
Confidence            3567899999999999999999885321         1458999999999999999999887654 1111    122233


Q ss_pred             HhhhhhhHHHhhhhhhc--CCCCCCCCcceEEEEEeC-CEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHc
Q 036852          195 NEFNEGVVKATCRCELQ--TPECDAVGSTAVVAIVTP-DKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEA  271 (408)
Q Consensus       195 ~~~~~~~~~~~~~~~~~--~~~~~~~GtT~vv~~i~~-~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~  271 (408)
                      ......+..........  ......+|||++++++.+ +++|++|+||||+|++|+|++.+||.||+|.++.|+.|+.++
T Consensus        76 ~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~  155 (274)
T 2iq1_A           76 TLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKC  155 (274)
T ss_dssp             HHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHc
Confidence            33333322222222111  123456999999999985 599999999999999999999999999999999999999999


Q ss_pred             CCeEEeecC--CcccCccccccccCCCCCCCC-ccCCCeEEEEeccCC-CCEEEEEcCCCCCCCCHHHHHHHHHHHhhcC
Q 036852          272 GGRVIYWDG--PRVLGVLAMSRAIGDNYLKPY-VSCEPEVTVVDRTAA-DDCLILATDGLWDVVSNETACGVARMCLRGK  347 (408)
Q Consensus       272 GG~v~~~~~--~r~~~~~~ltRaiGd~~~k~~-v~~~Pdi~~~~~~~~-gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~  347 (408)
                      ||.+...+.  .++++.+.+||+||+..+|+. ++++|++..+++... +++||||||||||+|++++|.+++..     
T Consensus       156 gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~-----  230 (274)
T 2iq1_A          156 GGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ-----  230 (274)
T ss_dssp             TCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHT-----
T ss_pred             CCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHH-----
Confidence            999986543  256889999999999998875 788999999984442 46999999999999999999999962     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCC
Q 036852          348 GRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKAA  407 (408)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~~  407 (408)
                                               ...++++|+.|++.|+.+|+.||+|||||+|....
T Consensus       231 -------------------------~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~  265 (274)
T 2iq1_A          231 -------------------------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWG  265 (274)
T ss_dssp             -------------------------SSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC-
T ss_pred             -------------------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCC
Confidence                                     12457899999999999999999999999997653


No 7  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=1.1e-44  Score=362.17  Aligned_cols=252  Identities=28%  Similarity=0.364  Sum_probs=194.5

Q ss_pred             CCCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHhh-hhHH-hHHHHHhh
Q 036852          120 NSNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHELR-SFTR-MDKEVNEF  197 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~~-~~~~-~~~~l~~~  197 (408)
                      +..+.|+.++++|+|..|||++++...+...      ....||+|||||||..+|++++++|+..- .... ....+...
T Consensus        10 ~~~~~~~~~s~~G~R~~nED~~~v~~~~~~~------~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~~~~~l~~a   83 (364)
T 2isn_A           10 EWYTTTVAATMLGRRPTDEDAILVSAPATSR------PNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEFTFAEVKKA   83 (364)
T ss_dssp             ETTEEEEEEEECTTSSSCCEEEEEECC----------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSCCHHHHHHH
T ss_pred             CCceEEEEEEcCCCCCcCCCeeEEeccCCCC------CCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcccHHHHHHH
Confidence            3557899999999999999999987544221      25689999999999999999999998651 1000 11222222


Q ss_pred             hhhhHHHhhhhhhcCCCCCCCCcceEEEEEeC------------------------------------------------
Q 036852          198 NEGVVKATCRCELQTPECDAVGSTAVVAIVTP------------------------------------------------  229 (408)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~------------------------------------------------  229 (408)
                      ...+..........   ...+|||++++++.+                                                
T Consensus        84 ~~~~d~~i~~~~~~---~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~  160 (364)
T 2isn_A           84 CLSLDAEIIRKLGP---KHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRV  160 (364)
T ss_dssp             HHHHHHHHHHHHCS---SSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCC
T ss_pred             HHHHHHHHHHhccc---CCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccc
Confidence            22222222111111   246899999998852                                                


Q ss_pred             ------------CEEEEEEecCCeeEEE-eCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCC
Q 036852          230 ------------DKIVIANCGDSRAVLC-RNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDN  296 (408)
Q Consensus       230 ------------~~l~vanvGDSR~yl~-r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~  296 (408)
                                  .++|++||||||+|++ |+|++++||+||++.++.|..||.++||.+.....+|+.+.+++||+|||.
T Consensus       161 ~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltRalGd~  240 (364)
T 2isn_A          161 PDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFGDS  240 (364)
T ss_dssp             CCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECG
T ss_pred             ccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeEEEecch
Confidence                        3899999999999999 799999999999999999999999999998865556777888999999998


Q ss_pred             CCC---------CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCC--HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q 036852          297 YLK---------PYVSCEPEVTVVDRTAADDCLILATDGLWDVVS--NETACGVARMCLRGKGRAPLAATPGAAPDVSNN  365 (408)
Q Consensus       297 ~~k---------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls--~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~  365 (408)
                      .+|         +.|+++|++..+. ..++|+||||||||||+|+  ++++.+++......                   
T Consensus       241 ~~k~~~~l~~~~~~v~~~Pdv~~~~-l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~-------------------  300 (364)
T 2isn_A          241 DFKMNPNLPPEEQKVIAVPDVRQFY-ALSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQR-------------------  300 (364)
T ss_dssp             GGSCCCSSCGGGSSSBCCCEEEEEE-ECTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHHH-------------------
T ss_pred             hhccccccCcccCceEEEeEEEEEE-CCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhh-------------------
Confidence            876         3577899999988 6678899999999999976  88888876433211                   


Q ss_pred             CCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852          366 NGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA  406 (408)
Q Consensus       366 ~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~  406 (408)
                            ....++++|+.|++.|+.+|+.||||||||+|...
T Consensus       301 ------~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  335 (364)
T 2isn_A          301 ------SKGDLEEVAARVMDYAYDMNSQDNISVMLVAFHNQ  335 (364)
T ss_dssp             ------TTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSS
T ss_pred             ------cCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCCC
Confidence                  11245789999999999999999999999999653


No 8  
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=3e-44  Score=353.33  Aligned_cols=251  Identities=24%  Similarity=0.368  Sum_probs=189.4

Q ss_pred             CCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-h---hhHHh------
Q 036852          121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-R---SFTRM------  190 (408)
Q Consensus       121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~---~~~~~------  190 (408)
                      ..+.||+.|++|+|+.|||++++.+.....     .....||+|||||||+.+++++++.++.. .   .|...      
T Consensus        20 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~-----~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~   94 (324)
T 2i44_A           20 PAFDAAIFTDIGGRKHQEDRFTLCPQLVPG-----RDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRS   94 (324)
T ss_dssp             TTEEEEEEEECTTSSSCCEEEEEESCCSTT-----CSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTS
T ss_pred             cceEEEEEECCCCCCccCCeEEEEecCCCC-----CCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhc
Confidence            468899999999999999999987543211     12568999999999999999999988765 1   13211      


Q ss_pred             ---------------HHHHHhhhhhhHHHhhhhhhcC-CCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeC---C-ee
Q 036852          191 ---------------DKEVNEFNEGVVKATCRCELQT-PECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRN---G-KA  250 (408)
Q Consensus       191 ---------------~~~l~~~~~~~~~~~~~~~~~~-~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~---g-~~  250 (408)
                                     ...+......+........... ....++|||++  ++.++++|++||||||+|++|+   | ++
T Consensus        95 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~--~i~~~~l~vanvGDSRa~l~r~~~~g~~~  172 (324)
T 2i44_A           95 DVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA--VLAKGFVAVGHLGDSRIAMGVETPNGLNC  172 (324)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE--EEETTEEEEEEESSCEEEEEEEETTEEEE
T ss_pred             cCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE--EEECCeEEEEEccCceEEEEeccCCCceE
Confidence                           1122222222222222221111 23334555554  4899999999999999999996   7 89


Q ss_pred             eccCCCCCCCCHHHHHHHHHcCCeEEeec-----CCcccCccccccccCC----CCCC----------CCccCCCeEEEE
Q 036852          251 LPLSSDHKPDRPDELNRIQEAGGRVIYWD-----GPRVLGVLAMSRAIGD----NYLK----------PYVSCEPEVTVV  311 (408)
Q Consensus       251 ~~LT~DHs~~~~~e~~ri~~~GG~v~~~~-----~~r~~~~~~ltRaiGd----~~~k----------~~v~~~Pdi~~~  311 (408)
                      ++||.||+|.++.|++||.++||.+....     ..+..|.+.++|++||    +.++          +.|+++|++..+
T Consensus       173 ~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~  252 (324)
T 2i44_A          173 EFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVV  252 (324)
T ss_dssp             EESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEE
T ss_pred             EECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEE
Confidence            99999999999999999999999985322     1234677889999999    4432          356889999999


Q ss_pred             eccCCCC-EEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHH--HHHHHHHHHH
Q 036852          312 DRTAADD-CLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSD--ASLLLTKLAL  388 (408)
Q Consensus       312 ~~~~~gd-~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aA~~L~~~Al  388 (408)
                      . +.++| |||||||||||+|++++|+++++......                          ..+++  +|+.|++.|+
T Consensus       253 ~-l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~--------------------------~~~~~~~~a~~L~~~A~  305 (324)
T 2i44_A          253 R-VTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEG--------------------------RNPAQALVEMTLAEQQS  305 (324)
T ss_dssp             E-CCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTT--------------------------CCHHHHHHHHHHHHHHH
T ss_pred             E-cCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcC--------------------------CCHHHHHHHHHHHHHHH
Confidence            8 66666 99999999999999999999998665321                          23467  8999999999


Q ss_pred             hCCCCCCeEEEEEEecC
Q 036852          389 ARHSTDNVSVVVVDLRK  405 (408)
Q Consensus       389 ~~gs~DNiTvIVV~l~~  405 (408)
                      .+|+.||||||||+|.+
T Consensus       306 ~~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          306 RNQSADNITAMTVFFKK  322 (324)
T ss_dssp             TTCCCCCEEEEEEEEC-
T ss_pred             hcCCCCCCEEEEEEeeC
Confidence            99999999999999975


No 9  
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=6.2e-44  Score=359.89  Aligned_cols=246  Identities=34%  Similarity=0.511  Sum_probs=196.3

Q ss_pred             CCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhh----HHhHHHHH
Q 036852          121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSF----TRMDKEVN  195 (408)
Q Consensus       121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~----~~~~~~l~  195 (408)
                      ..+.||++|++|+|+.|||++++....         ....+|+|||||||+.+++++++.+... ..+    ..+...+.
T Consensus       120 ~~~~~g~~s~~G~R~~NED~~~~~~~~---------~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~  190 (389)
T 4da1_A          120 SLENVGCASQIGKRKENEDRFDFAQLT---------DEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLT  190 (389)
T ss_dssp             CGGGCEEEEECTTSSSCCEEEEEEECS---------SSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred             cceeEEEecCCCCCCCCcceeeeeecC---------CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHH
Confidence            346789999999999999999885321         1458999999999999999999888765 111    11222233


Q ss_pred             hhhhhhHHHhhhhhhcC--CCCCCCCcceEEEEEeCC-EEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcC
Q 036852          196 EFNEGVVKATCRCELQT--PECDAVGSTAVVAIVTPD-KIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAG  272 (408)
Q Consensus       196 ~~~~~~~~~~~~~~~~~--~~~~~~GtT~vv~~i~~~-~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~G  272 (408)
                      .....+...........  .....+|||++++++.++ ++|++||||||+|++|+|++++||+||++.++.|.+||.++|
T Consensus       191 ~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~g  270 (389)
T 4da1_A          191 LAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCG  270 (389)
T ss_dssp             HHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcC
Confidence            33322222222222121  224468999999999876 999999999999999999999999999999999999999999


Q ss_pred             CeEEeec--CCcccCccccccccCCCCCCCC-ccCCCeEEEEeccC-CCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCC
Q 036852          273 GRVIYWD--GPRVLGVLAMSRAIGDNYLKPY-VSCEPEVTVVDRTA-ADDCLILATDGLWDVVSNETACGVARMCLRGKG  348 (408)
Q Consensus       273 G~v~~~~--~~r~~~~~~ltRaiGd~~~k~~-v~~~Pdi~~~~~~~-~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~  348 (408)
                      |.+....  ..++++.+.+||+||+..+|+. +++.|++..+.+.. ++++||||||||||+|++++|.+++..+     
T Consensus       271 G~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~-----  345 (389)
T 4da1_A          271 GFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC-----  345 (389)
T ss_dssp             CCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHS-----
T ss_pred             CeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhc-----
Confidence            9887532  3478899999999999988876 78899999999654 3779999999999999999999999731     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852          349 RAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK  405 (408)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~  405 (408)
                                               ..++++|+.|++.|+.+|+.||||||||+|..
T Consensus       346 -------------------------~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~  377 (389)
T 4da1_A          346 -------------------------HDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGA  377 (389)
T ss_dssp             -------------------------SSHHHHHHHHHHHHHHHTCCSCEEEEEEEECC
T ss_pred             -------------------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEecC
Confidence                                     23578999999999999999999999999964


No 10 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=3.8e-44  Score=359.70  Aligned_cols=249  Identities=25%  Similarity=0.283  Sum_probs=191.4

Q ss_pred             CCCCeEEEeecCCCCCCce-----eeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhH-HhHH
Q 036852          120 NSNPKYGVSSVCGRRRDME-----DAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFT-RMDK  192 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~nE-----Da~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~-~~~~  192 (408)
                      +..+.||.++++|+|+.||     |++++...+...      ....||+|||||||+.+|++++++++.. ..+. ...+
T Consensus        10 ~~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~------~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~   83 (377)
T 3d8k_A           10 EGRTVCASATSRNRRPTSESPHSDDVVVVEGMLRGR------PETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLRDVNEE   83 (377)
T ss_dssp             HHHHHHHHTTTCEEEEEECC---CEEEEEEEECSSC------TTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCSSSSHH
T ss_pred             CCcEEEEEEEccCCCCccccchhcceEEEecccCCC------CCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhcccHHH
Confidence            4567889999999999775     555554322111      2568999999999999999999998865 1110 0122


Q ss_pred             HHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--------------------------------------------
Q 036852          193 EVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--------------------------------------------  228 (408)
Q Consensus       193 ~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--------------------------------------------  228 (408)
                      .+......+........      ..+|||++++++.                                            
T Consensus        84 al~~af~~~d~~l~~~~------~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~  157 (377)
T 3d8k_A           84 EITRQFERMDGDLRAAN------LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRR  157 (377)
T ss_dssp             HHHHHHHHHHHHHHHHT------CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGG
T ss_pred             HHHHHHHHHHHHHHhcc------cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccc
Confidence            22222222222221111      1479999888874                                            


Q ss_pred             -------CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCC-cccCccccccccCCCCCC-
Q 036852          229 -------PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGP-RVLGVLAMSRAIGDNYLK-  299 (408)
Q Consensus       229 -------~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~-r~~~~~~ltRaiGd~~~k-  299 (408)
                             ++++|++||||||+|++|+|++++||+||+|.++.|..||.++||.+....+. |+.|.+++||+|||..+| 
T Consensus       158 ~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~  237 (377)
T 3d8k_A          158 DPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKK  237 (377)
T ss_dssp             CGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSC
T ss_pred             ccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhhc
Confidence                   14899999999999999999999999999999999999999999998743443 888999999999998877 


Q ss_pred             --------CCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCC
Q 036852          300 --------PYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGET  371 (408)
Q Consensus       300 --------~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (408)
                              +.++++|+|..+. +.++|+||||||||||+|+++++++.+......                         
T Consensus       238 ~~~~~~~~~~v~~~Pdv~~~~-l~~~D~llL~SDGl~d~ls~~e~v~~v~~~~~~-------------------------  291 (377)
T 3d8k_A          238 GGQGKLQQDLVSAVPDVTTFF-AYPGDDIVAGTAGAFAHFRSHAAIAAAIALYPV-------------------------  291 (377)
T ss_dssp             C---CCSSCSSBCCCEEEEEE-ECTTCEEEEECGGGGCSCSSHHHHHHHHTTSCC-------------------------
T ss_pred             ccccccccCccccCCcEEEEE-cCCCCEEEEEECCcccCCCcHHHHHHHHHHhhc-------------------------
Confidence                    5788999999998 667899999999999999999988755421100                         


Q ss_pred             ccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCC
Q 036852          372 TDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKA  406 (408)
Q Consensus       372 ~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~  406 (408)
                      ....++++|+.|++.|+.+|+.||||||||+|...
T Consensus       292 ~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  326 (377)
T 3d8k_A          292 SPETVLDAAKAMVVNAKRRKVTKNISTFVRHLPES  326 (377)
T ss_dssp             CGGGHHHHHHHHHHTTTTSSCCSCCCEEEEECCSS
T ss_pred             cCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEecCC
Confidence            13456889999999999999999999999999764


No 11 
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=8.3e-44  Score=360.22  Aligned_cols=252  Identities=19%  Similarity=0.249  Sum_probs=192.2

Q ss_pred             CCCCeEEEeecCCCCCC--------ceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--h-h--
Q 036852          120 NSNPKYGVSSVCGRRRD--------MEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL--R-S--  186 (408)
Q Consensus       120 ~~~~~~g~~s~~G~R~~--------nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~-~--  186 (408)
                      ...+.||+++.+|.|..        |||++++....         ....||||||||||+.+|++++++++..  . .  
T Consensus        24 ~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~~~---------~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~   94 (401)
T 2j4o_A           24 CHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSE---------NNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLN   94 (401)
T ss_dssp             CTTEEEEEECCEEECSSSSCEECCCCCEEEEEEEET---------TTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCC
T ss_pred             cccCceeEEecccccccccccCCCCCCceEEEecCC---------CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            35789999999999884        99999875311         2558999999999999999999988764  1 0  


Q ss_pred             ----hHHhHHHHHhhhhhhHHHhhhh-----------hhcC-----------------------CCCCCCCcceEEEEEe
Q 036852          187 ----FTRMDKEVNEFNEGVVKATCRC-----------ELQT-----------------------PECDAVGSTAVVAIVT  228 (408)
Q Consensus       187 ----~~~~~~~l~~~~~~~~~~~~~~-----------~~~~-----------------------~~~~~~GtT~vv~~i~  228 (408)
                          ...+.+.+......+.......           ....                       .....+|||++++++.
T Consensus        95 ~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~  174 (401)
T 2j4o_A           95 AEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLL  174 (401)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEE
Confidence                0111122222211111111000           0000                       0123689999999999


Q ss_pred             CCEEEEEEecCCeeEEEeCC----eeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCC-----
Q 036852          229 PDKIVIANCGDSRAVLCRNG----KALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLK-----  299 (408)
Q Consensus       229 ~~~l~vanvGDSR~yl~r~g----~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k-----  299 (408)
                      ++++|++||||||+|++|++    ++++||.||+|.++.|.+||.++||.+......+.++.+.+||+|||..+|     
T Consensus       175 ~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~  254 (401)
T 2j4o_A          175 NNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTD  254 (401)
T ss_dssp             TTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGG
T ss_pred             CCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcccccc
Confidence            99999999999999999988    999999999999999999999999976433445777888999999997655     


Q ss_pred             ---------CCccCCCeEEE-EeccCCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 036852          300 ---------PYVSCEPEVTV-VDRTAADDCLILATDGLWDVV--------SNETACGVARMCLRGKGRAPLAATPGAAPD  361 (408)
Q Consensus       300 ---------~~v~~~Pdi~~-~~~~~~gd~lIL~SDGlwd~l--------s~~ei~~iv~~~~~~~~~~~~~~~~~~~~~  361 (408)
                               +.++++|+|.. +.+...++|||||||||||+|        ++++|+++++..+...              
T Consensus       255 ~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~--------------  320 (401)
T 2j4o_A          255 IDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQ--------------  320 (401)
T ss_dssp             STTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHC--------------
T ss_pred             cccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcC--------------
Confidence                     56889999996 885554558999999999999        8999999998765431              


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHHHh-------CCC--------CCCeEEEEEEecCC
Q 036852          362 VSNNNGSGETTDKCCSDASLLLTKLALA-------RHS--------TDNVSVVVVDLRKA  406 (408)
Q Consensus       362 ~~~~~~~~~~~~~~~~~aA~~L~~~Al~-------~gs--------~DNiTvIVV~l~~~  406 (408)
                                  ..++.+|+.|++.|+.       +|+        .||||||||+|..+
T Consensus       321 ------------~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~  368 (401)
T 2j4o_A          321 ------------TSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP  368 (401)
T ss_dssp             ------------SSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred             ------------CCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence                        2357888999999875       776        89999999999764


No 12 
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=2.4e-43  Score=351.88  Aligned_cols=240  Identities=21%  Similarity=0.262  Sum_probs=183.4

Q ss_pred             eecCCCCCC---ceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--h-hh------HHhHHHHH
Q 036852          128 SSVCGRRRD---MEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL--R-SF------TRMDKEVN  195 (408)
Q Consensus       128 ~s~~G~R~~---nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~-~~------~~~~~~l~  195 (408)
                      ++.+|+|+.   |||++++....         ....||+|||||||+.+|++++++++..  . .+      ..+.+.+.
T Consensus        25 ~~~~G~r~~~~~nED~~~~~~~~---------~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~   95 (358)
T 2irm_A           25 YKDDGRRCEGYESRDKKCLCISD---------NNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIR   95 (358)
T ss_dssp             ECSSSCEEECSSCCEEEEEEECS---------SSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHH
T ss_pred             eecCCCCCCCCCCCceEEEEECC---------CCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHH
Confidence            677999874   99999875411         1558999999999999999999988765  1 10      11222222


Q ss_pred             hhhhhhHHHhhhhh-----------hcC------------------------CCCCCCCcceEEEEEeCCEEEEEEecCC
Q 036852          196 EFNEGVVKATCRCE-----------LQT------------------------PECDAVGSTAVVAIVTPDKIVIANCGDS  240 (408)
Q Consensus       196 ~~~~~~~~~~~~~~-----------~~~------------------------~~~~~~GtT~vv~~i~~~~l~vanvGDS  240 (408)
                      .....+....+...           .+.                        .....||||++++++.++++|+||||||
T Consensus        96 ~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDS  175 (358)
T 2irm_A           96 QSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNC  175 (358)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSC
T ss_pred             HHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccC
Confidence            22222221111100           000                        1233699999999999999999999999


Q ss_pred             eeEEEeC---C--eeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCC--------------CC
Q 036852          241 RAVLCRN---G--KALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLK--------------PY  301 (408)
Q Consensus       241 R~yl~r~---g--~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k--------------~~  301 (408)
                      |+|++|+   |  ++++||+||+|.++.|++||.++||.+..   .|+.+.+ +||+|||..+|              +.
T Consensus       176 Ra~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~---~r~~g~l-lTRalGd~~~K~~~~~~~~~~~~~~~~  251 (358)
T 2irm_A          176 RALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN---FEGVPLY-STRCIGNYLGKAGYKDCNFLSSATAEP  251 (358)
T ss_dssp             EEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG---GTTCTTC-BSBCEECHHHHTTGGGSSSSTTCSSCS
T ss_pred             eEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec---cCcCCEE-cccCCcCHHHhccccccccccccCCCC
Confidence            9999998   8  99999999999999999999999998753   4555555 99999997655              36


Q ss_pred             ccCCCeEEE-EeccCCCCEEEEEcCCCCCCCC----------HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCC
Q 036852          302 VSCEPEVTV-VDRTAADDCLILATDGLWDVVS----------NETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGE  370 (408)
Q Consensus       302 v~~~Pdi~~-~~~~~~gd~lIL~SDGlwd~ls----------~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (408)
                      ++++|+|.. +.+...++|||||||||||+|+          +++|+++++..+..                        
T Consensus       252 v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~------------------------  307 (358)
T 2irm_A          252 VIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQN------------------------  307 (358)
T ss_dssp             SBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTT------------------------
T ss_pred             EeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhc------------------------
Confidence            889999994 8866555679999999999999          99999999866542                        


Q ss_pred             CccchHHHHHHHHHHHHHh---------------CC--CCCCeEEEEEEecCC
Q 036852          371 TTDKCCSDASLLLTKLALA---------------RH--STDNVSVVVVDLRKA  406 (408)
Q Consensus       371 ~~~~~~~~aA~~L~~~Al~---------------~g--s~DNiTvIVV~l~~~  406 (408)
                        ...++++|+.|++.|+.               +|  +.||||||||+|+.+
T Consensus       308 --~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~p  358 (358)
T 2irm_A          308 --QSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNYA  358 (358)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC-
T ss_pred             --CCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCCC
Confidence              13457899999999976               57  899999999999753


No 13 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=2.4e-42  Score=355.18  Aligned_cols=274  Identities=25%  Similarity=0.313  Sum_probs=183.1

Q ss_pred             eEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh--hhh------H------
Q 036852          124 KYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL--RSF------T------  188 (408)
Q Consensus       124 ~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~------~------  188 (408)
                      -.++.|.+|. |..|||++.+......        ...||||||||||+.+|++++++++..  ..+      .      
T Consensus        38 v~~~~s~~g~~R~~nED~~~v~~~~~~--------~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~  109 (467)
T 2pnq_A           38 ILGFDSNRLPANAPIEDRRSATTCLQT--------RGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAV  109 (467)
T ss_dssp             EEEEEEEEECCSSSCCEEEEEEEESSS--------SCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTT
T ss_pred             eEEEEeeccCCCCCCCCceeeeeccCC--------CcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhh
Confidence            4445555554 9999999987543211        448999999999999999999988754  110      0      


Q ss_pred             --------------------------------------------------HhHHHHHhhhhhhHHHhhhhhhc-------
Q 036852          189 --------------------------------------------------RMDKEVNEFNEGVVKATCRCELQ-------  211 (408)
Q Consensus       189 --------------------------------------------------~~~~~l~~~~~~~~~~~~~~~~~-------  211 (408)
                                                                        .+...+......+..........       
T Consensus       110 ~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~  189 (467)
T 2pnq_A          110 ESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFL  189 (467)
T ss_dssp             C----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHH
T ss_pred             hccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence                                                              01111212211111111111110       


Q ss_pred             ---CCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEe---CC--eeeccCCCCCCCCHHHHHHHHHcCCeE---EeecC
Q 036852          212 ---TPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCR---NG--KALPLSSDHKPDRPDELNRIQEAGGRV---IYWDG  280 (408)
Q Consensus       212 ---~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r---~g--~~~~LT~DHs~~~~~e~~ri~~~GG~v---~~~~~  280 (408)
                         .+....||||++++++.++++|+||+||||+|+++   +|  .+++||.||++.++.|++||.++|+..   .....
T Consensus       190 ~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~  269 (467)
T 2pnq_A          190 NYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ  269 (467)
T ss_dssp             HHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS
T ss_pred             ccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec
Confidence               11234699999999999999999999999999998   47  899999999999999999999998532   11234


Q ss_pred             CcccCccccccccCCCCCC---------------------------------CCccCCCeEEEEeccCCCCEEEEEcCCC
Q 036852          281 PRVLGVLAMSRAIGDNYLK---------------------------------PYVSCEPEVTVVDRTAADDCLILATDGL  327 (408)
Q Consensus       281 ~r~~~~~~ltRaiGd~~~k---------------------------------~~v~~~Pdi~~~~~~~~gd~lIL~SDGl  327 (408)
                      .|++|.+++||+|||..+|                                 |+++++|+|+.+.+...+.|||||||||
T Consensus       270 ~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGL  349 (467)
T 2pnq_A          270 DRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGL  349 (467)
T ss_dssp             SSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHH
T ss_pred             CccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCc
Confidence            6888999999999998655                                 4588999999999555555888999999


Q ss_pred             CCCCCHHHHHHHHHHHhhcCCCCCCC--CCCCC-CCCCCCCC---CCCCCccchHHHHHHHHHHHHHhCC----------
Q 036852          328 WDVVSNETACGVARMCLRGKGRAPLA--ATPGA-APDVSNNN---GSGETTDKCCSDASLLLTKLALARH----------  391 (408)
Q Consensus       328 wd~ls~~ei~~iv~~~~~~~~~~~~~--~~~~~-~~~~~~~~---~~~~~~~~~~~~aA~~L~~~Al~~g----------  391 (408)
                      ||+|++++|++++...+.......+.  +.... ........   ..........+.+|..|++.|+.+|          
T Consensus       350 wd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~  429 (467)
T 2pnq_A          350 WETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERL  429 (467)
T ss_dssp             HTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC------------
T ss_pred             cccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHH
Confidence            99999999999999876542110000  00000 00000000   0000000112457889999999875          


Q ss_pred             -------------CCCCeEEEEEEecC
Q 036852          392 -------------STDNVSVVVVDLRK  405 (408)
Q Consensus       392 -------------s~DNiTvIVV~l~~  405 (408)
                                   .+||||||||+|..
T Consensus       430 ~~ll~~~~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          430 SKMLSLPEELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             -------------CCSCEEEEEEEECH
T ss_pred             HhhhcCCccccccCCCCcEEEEEEeCc
Confidence                         38999999999964


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00  E-value=7.6e-40  Score=309.64  Aligned_cols=235  Identities=21%  Similarity=0.246  Sum_probs=180.8

Q ss_pred             CCCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-h-hhH--------H
Q 036852          121 SNPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-R-SFT--------R  189 (408)
Q Consensus       121 ~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~-~~~--------~  189 (408)
                      ..+.|++.|++|+ |+.|||++++....         ....+|+|||||||+.++.++++.+... . .|.        .
T Consensus         4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~---------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~   74 (250)
T 2pk0_A            4 KYMEISLLTDIGQRRSNNQDFINQFENK---------AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSE   74 (250)
T ss_dssp             CCEEEEEEEECCTTCSCCCEEEEEEECT---------TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred             ceEEEEEecCCCCCCCcCCCceEeccCC---------CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhh
Confidence            5689999999999 99999999876532         1448999999999998888887766544 1 221        1


Q ss_pred             hHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHH
Q 036852          190 MDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQ  269 (408)
Q Consensus       190 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~  269 (408)
                      ....+......++...+......+ ...+|||++++++.+++++++|+||||+|++|+|++++||.||++     .+.+.
T Consensus        75 ~~~~l~~~~~~~~~~l~~~~~~~~-~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~-----~~~~~  148 (250)
T 2pk0_A           75 IRDWMLVSIETENRKIYELGQSDD-YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSL-----VNELV  148 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT-CTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBH-----HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCC-CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCH-----HHHHH
Confidence            122233333333333332222223 456899999999999999999999999999999999999999994     45566


Q ss_pred             HcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCC
Q 036852          270 EAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGR  349 (408)
Q Consensus       270 ~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~  349 (408)
                      +.|+ +...+...+++.+.+||+||+..     ..+|++..++ ..++|+||||||||||+|+++++.++++.       
T Consensus       149 ~~g~-i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~-l~~gd~lll~SDGl~d~l~~~~i~~~~~~-------  214 (250)
T 2pk0_A          149 KAGQ-LTEEEAASHPQKNIITQSIGQAN-----PVEPDLGVHL-LEEGDYLVVNSDGLTNMLSNADIATVLTQ-------  214 (250)
T ss_dssp             HTTS-SCHHHHHTCCSCCCBSCCBSCSS-----CCCCEEEEEE-CCTTCEEEEECHHHHTTSCHHHHHHHHTS-------
T ss_pred             HcCC-CCHHHHHhCCCcceEEeecCCCC-----CccceEEEEE-cCCCCEEEEECCCCCCCcCHHHHHHHHhc-------
Confidence            6663 44434446778999999999754     2389999888 67799999999999999999999999852       


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCC
Q 036852          350 APLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRKAA  407 (408)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~~~  407 (408)
                                             ...++++|+.|++.|+.+++.||+|||||++..++
T Consensus       215 -----------------------~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~~~  249 (250)
T 2pk0_A          215 -----------------------EKTLDDKNQDLITLANHRGGLDNITVALVYVESEA  249 (250)
T ss_dssp             -----------------------SSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC--
T ss_pred             -----------------------CCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeCCc
Confidence                                   12467889999999999999999999999998754


No 15 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00  E-value=1.3e-39  Score=305.69  Aligned_cols=226  Identities=23%  Similarity=0.301  Sum_probs=176.0

Q ss_pred             CCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hh-hH-----HhHHH
Q 036852          122 NPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RS-FT-----RMDKE  193 (408)
Q Consensus       122 ~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~-~~-----~~~~~  193 (408)
                      .+.|+..|.+|+ |+.|||++++.              ..+|+|||||||+.+++++++.+.+. .. +.     .+...
T Consensus         4 ~~~~~~~s~~G~~r~~nED~~~~~--------------~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~   69 (237)
T 1txo_A            4 VLRYAARSDRGLVRANNEDSVYAG--------------ARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAK   69 (237)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEEC--------------SSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHH
T ss_pred             EEEEEEecCCCCCCCcCCCccccC--------------CCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHH
Confidence            478999999997 99999999762              27999999999999999998887654 11 10     12222


Q ss_pred             HHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCC
Q 036852          194 VNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGG  273 (408)
Q Consensus       194 l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG  273 (408)
                      +.......+..........+....+|||++++++.+++++++|+||||+|++|+|++.+||.||+     ..+++.+.| 
T Consensus        70 l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~-----~~~~~~~~G-  143 (237)
T 1txo_A           70 LDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDT-----FVQTLVDEG-  143 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCB-----HHHHHHHTT-
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCC-----HHHHHHHcC-
Confidence            33333333222222222333445689999999999999999999999999999999999999999     456676666 


Q ss_pred             eEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCC
Q 036852          274 RVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLA  353 (408)
Q Consensus       274 ~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~  353 (408)
                      .+...+...++.++.++|++|+.      ...|++..+. ..++|+||||||||||+|+++++.++++.           
T Consensus       144 ~i~~~~~~~~~~~~~~tr~lg~~------~~~p~~~~~~-l~~~d~lvl~SDGl~d~l~~~~i~~~~~~-----------  205 (237)
T 1txo_A          144 RITPEEAHSHPQRSLIMRALTGH------EVEPTLTMRE-ARAGDRYLLCSDGLSDPVSDETILEALQI-----------  205 (237)
T ss_dssp             SSCTTGGGGCTTTTCBCCCBSSS------CCCCEEEEEE-CCTTCEEEEECHHHHTTSCHHHHHHHHTS-----------
T ss_pred             CCCHHHHhhCccccceeeccCCC------CccceEEEEe-cCCCCEEEEECCCCCCCCCHHHHHHHHhc-----------
Confidence            34444444567788899999963      2478998888 67789999999999999999999999841           


Q ss_pred             CCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEecC
Q 036852          354 ATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLRK  405 (408)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~~  405 (408)
                                          ..++++|+.|++.|+.+|+.||+|||||+|.+
T Consensus       206 --------------------~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~  237 (237)
T 1txo_A          206 --------------------PEVAESAHRLIELALRGGGPDNVTVVVADLEH  237 (237)
T ss_dssp             --------------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEEEC
T ss_pred             --------------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence                                24578999999999999999999999999864


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00  E-value=2.8e-38  Score=296.88  Aligned_cols=227  Identities=21%  Similarity=0.245  Sum_probs=162.0

Q ss_pred             CeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhh-H--------HhH
Q 036852          123 PKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSF-T--------RMD  191 (408)
Q Consensus       123 ~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~-~--------~~~  191 (408)
                      ++|++.|++|+ |+.|||++ +....   .      .. +|+|||||||+.++.++++.+... ..+ .        ...
T Consensus         1 ~~~~~~s~~G~~r~~neD~~-~~~~~---~------~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~   69 (240)
T 2j82_A            1 MDVAGLTDCGLIRKSNQDAF-YIDEK---H------QR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPV   69 (240)
T ss_dssp             CEEEEEEECCSSCSSCCEEE-EECTT---T------CC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHH
T ss_pred             CeEEEeCCCCCCCCcCCCcc-EecCC---C------Ce-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHH
Confidence            57999999999 99999999 64321   1      33 999999999998777777666543 111 1        112


Q ss_pred             HHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHH
Q 036852          192 KEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQ  269 (408)
Q Consensus       192 ~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~  269 (408)
                      ..+......++...+......+....+|||++++++.  +++++++|+||||+|++|+|++.+||.||++     .+++.
T Consensus        70 ~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~-----~~~~~  144 (240)
T 2j82_A           70 TLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTW-----IAQAV  144 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBH-----HHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcH-----HHHHH
Confidence            2233333333333333333334456689999999999  9999999999999999999999999999994     45566


Q ss_pred             HcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCC
Q 036852          270 EAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGR  349 (408)
Q Consensus       270 ~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~  349 (408)
                      +.|+ +...+...+++.+.+||+||+..     ...|++..+. ..++|+||||||||||+++++++.++++        
T Consensus       145 ~~g~-i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~-l~~gd~lll~SDGl~d~l~~~~i~~~l~--------  209 (240)
T 2j82_A          145 QLGS-LTIEQARQHPWRHVLSQCLGRED-----LSQIDIQPID-LEPGDRLLLCSDGLTEELTDDVISIYLS--------  209 (240)
T ss_dssp             ----------------CCCBSCCBSCTT-----CCCCEEEEEE-CCTTCEEEEECHHHHTTSCHHHHHHHHT--------
T ss_pred             HcCC-CCHHHHhcCCCcCeEeecCCCCC-----ceeEEEEEEe-eCCCCEEEEECCCCCCCCCHHHHHHHHc--------
Confidence            6653 44445556788999999999753     3489999888 7779999999999999999999999984        


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 036852          350 APLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDL  403 (408)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l  403 (408)
                                             ...++++|+.|++.|+.+|+.||+|||||++
T Consensus       210 -----------------------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~  240 (240)
T 2j82_A          210 -----------------------EPNVQKAAAALVDAAKTHGGRDNVTVVVISV  240 (240)
T ss_dssp             -----------------------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred             -----------------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence                                   1235788999999999999999999999985


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00  E-value=2.1e-37  Score=290.05  Aligned_cols=222  Identities=22%  Similarity=0.256  Sum_probs=170.8

Q ss_pred             CCCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCc--HHHHHHHHHHHHhhhhHHh--HHHHH
Q 036852          121 SNPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCS--HVAMRCRERLHELRSFTRM--DKEVN  195 (408)
Q Consensus       121 ~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~--~~a~~a~~~l~~~~~~~~~--~~~l~  195 (408)
                      ..+.|++.|++|+ |+.|||++++      +.        .+|+|||||||+  .+|.++.+.+...  +...  ...+.
T Consensus         4 ~~~~~~~~s~~G~~r~~neD~~~~------~~--------~~~~V~DG~Gg~G~~as~~~~~~l~~~--~~~~~~~~~l~   67 (234)
T 2jfr_A            4 SVLSAATATDQGPVRENNQDACLA------DG--------ILYAVADGFGARGHHASATALKTLSAG--FAAAPDRDGLL   67 (234)
T ss_dssp             SEEEEEEEEECCSSCSSCCEEEEE------ET--------TEEEEEEEESTTHHHHHHHHHHHHHHH--HHHSCSHHHHH
T ss_pred             eeEEEEEecCCCCCCCcCCCccee------CC--------cEEEEEeCCCccHHHHHHHHHHHHHHH--HhcCCcHHHHH
Confidence            3578999999999 9999999966      11        799999999977  7777777766554  1110  22233


Q ss_pred             hhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEeCCE---EEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcC
Q 036852          196 EFNEGVVKATCRCELQTPECDAVGSTAVVAIVTPDK---IVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAG  272 (408)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~~~~---l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~G  272 (408)
                      .....++...+......+..  +|||++++++.+++   ++++|+||||+|++|+|++.+||.||+     ..+++.+.|
T Consensus        68 ~~~~~~~~~l~~~~~~~~~~--~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~-----~~~~~~~~g  140 (234)
T 2jfr_A           68 EAVQQANLRVFELLGDEPTV--SGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHS-----VAGELVRMG  140 (234)
T ss_dssp             HHHHHHHHHHHHHHTTSSSC--CEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCB-----HHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhccCCCC--CCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCC-----HHHHHHHcC
Confidence            33333333322222222222  89999999999998   999999999999999999999999999     455666766


Q ss_pred             CeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCC
Q 036852          273 GRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPL  352 (408)
Q Consensus       273 G~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~  352 (408)
                      + +...+...+++.+.+||+||+..     ..+|++..++ ..++|+||||||||||+++++++.+++ .   .      
T Consensus       141 ~-i~~~~~~~~~~~~~~tralG~~~-----~~~~~~~~~~-l~~gd~lll~SDGl~d~~~~~~i~~~~-~---~------  203 (234)
T 2jfr_A          141 E-ITRHEARWHPQRHLLTRALGIGP-----HIGPDVFGID-CGPGDRLLISSDGLFAAADEALIVDAA-T---S------  203 (234)
T ss_dssp             S-SCHHHHTTCTTTTCBSCCBSSSS-----CCCCEEEECC-CCTTCEEEEECGGGGTTSCHHHHHHHH-T---C------
T ss_pred             C-CCHHHHhcCcccceeeecCcCCC-----CceeEEEEEe-cCCCCEEEEECCCCccccCHHHHHHHH-c---c------
Confidence            3 44444445678899999999753     3488988887 778999999999999999999999988 2   1      


Q ss_pred             CCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEe
Q 036852          353 AATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDL  403 (408)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l  403 (408)
                                           ..++++|+.|++.|+.+++.||+|||||++
T Consensus       204 ---------------------~~~~~~a~~l~~~a~~~g~~DniTvivv~~  233 (234)
T 2jfr_A          204 ---------------------PDPQVAVRRLVEVANDAGGSDNTTVVVIDL  233 (234)
T ss_dssp             ---------------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred             ---------------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence                                 135788999999999999999999999987


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00  E-value=1.7e-35  Score=273.93  Aligned_cols=195  Identities=19%  Similarity=0.145  Sum_probs=143.9

Q ss_pred             CceEEEEEeCCCCcHHHHHHHHHHHHh--hhhHHhHHHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEE
Q 036852          158 ELHYFGVYDGHGCSHVAMRCRERLHEL--RSFTRMDKEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIV  233 (408)
Q Consensus       158 ~~~lfaVaDGhGG~~~a~~a~~~l~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~  233 (408)
                      +..+|+|||||||+.+++++++.+.+.  ..+... ..+......++..........+....||||++++++.  ++++|
T Consensus         9 ~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~-~~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~   87 (211)
T 3rnr_A            9 DKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAG-GSPLDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLE   87 (211)
T ss_dssp             TEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEE
T ss_pred             CccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEE
Confidence            558999999999999888887766554  111110 0011222233333333334455667899999999999  99999


Q ss_pred             EEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeE--EEE
Q 036852          234 IANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEV--TVV  311 (408)
Q Consensus       234 vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi--~~~  311 (408)
                      ++|+||||+|++|+|++.+||+||+     ..+++.+.|.  ..   ..++.++.+||+||....     .+|++  ..+
T Consensus        88 ~anvGDSr~yl~r~g~~~~lt~dh~-----~~~~~~~~g~--~~---~~~~~~~~ltralG~~~~-----~~~~~~~~~~  152 (211)
T 3rnr_A           88 WASVGDCRVYLFKGGRLSRLSLDHN-----VSSEMVLLGR--GP---VPGPAGEMITSFIGIENL-----TEISTSEAPL  152 (211)
T ss_dssp             EEEESSCEEEEEETTEEEECCCCCB-----HHHHHHHTTS--CC---CCSHHHHCBSCCBTCSSC-----CCCEECSSCE
T ss_pred             EEEEccCeEEEEeCCEEEEECCCcH-----HHHHHHHcCC--Ch---hhCCCccEEecccCCCCC-----cceeEeccee
Confidence            9999999999999999999999999     6777888885  22   566778899999996432     26787  566


Q ss_pred             eccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC
Q 036852          312 DRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARH  391 (408)
Q Consensus       312 ~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~g  391 (408)
                      + ..++|+||||||||||++++++|.+++..                             ...     |+.|++.|+.+|
T Consensus       153 ~-l~~gd~llL~SDGl~d~~~~~~i~~~l~~-----------------------------~~~-----a~~L~~~a~~~g  197 (211)
T 3rnr_A          153 P-LEAGEGVLVVSDGVYRSLHEDRIAMALSR-----------------------------GSD-----ARGILQEVEAQG  197 (211)
T ss_dssp             E-CCTTCEEEEEEC-----CCTTEEEEEECT-----------------------------TSC-----HHHHHHHHHHSC
T ss_pred             c-CCCCCEEEEEcCCCCCCcCHHHHHHHHhc-----------------------------CCh-----HHHHHHHHHHcC
Confidence            6 77899999999999999999998777631                             001     667999999999


Q ss_pred             --CCCCeEEEEEEe
Q 036852          392 --STDNVSVVVVDL  403 (408)
Q Consensus       392 --s~DNiTvIVV~l  403 (408)
                        +.||+|||||+|
T Consensus       198 ~~~~DNiTvivv~L  211 (211)
T 3rnr_A          198 RPYQDNATLALVIL  211 (211)
T ss_dssp             TTSCSSCEEEEEEC
T ss_pred             CCCCCceEEEEEeC
Confidence              999999999986


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.81  E-value=2.3e-19  Score=168.34  Aligned_cols=202  Identities=16%  Similarity=0.140  Sum_probs=125.1

Q ss_pred             CCCCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHH----HHHHHHHh-hhhHHhHHH
Q 036852          120 NSNPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMR----CRERLHEL-RSFTRMDKE  193 (408)
Q Consensus       120 ~~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~----a~~~l~~~-~~~~~~~~~  193 (408)
                      ...+.+|+++.... +..+.|.+.+.... .        ...+|+|+||+|+...|..    +...+... .......+.
T Consensus         5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~~-~--------~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~~~~~~   75 (242)
T 3t91_A            5 SYRVSTGAAHAAKGGGLVSGDSYSMMELG-A--------RKYAAAISDGMGNGARAHFESNETIKLLEKILESGIDEKIA   75 (242)
T ss_dssp             CCEEEEEEEEECTTSCSCCSCEEEEEEET-T--------TEEEEEEECC-----CCSEEECHHHHHHHHHHHHTCCHHHH
T ss_pred             eEEEEEEeehhcCCccccCCcEEEEEEeC-C--------CeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence            35567787776554 67899998875322 1        2367999999996554332    22322221 000011111


Q ss_pred             HHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHc
Q 036852          194 VNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEA  271 (408)
Q Consensus       194 l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~  271 (408)
                      +.    .++...+    .. ....+++|+++++++  .++++++|+||+|+|++|+|++.+|+.++.|            
T Consensus        76 l~----~~n~~l~----~~-~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~------------  134 (242)
T 3t91_A           76 IK----TINSILS----LR-TTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP------------  134 (242)
T ss_dssp             HH----HHHHHHT----TC-----CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC---------------
T ss_pred             HH----HHHHHHH----hc-CCCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce------------
Confidence            21    1111111    11 123588999999997  6899999999999999999999998765441            


Q ss_pred             CCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCC-----HHHHHHHHHHHhhc
Q 036852          272 GGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVS-----NETACGVARMCLRG  346 (408)
Q Consensus       272 GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls-----~~ei~~iv~~~~~~  346 (408)
                                           +|-   .+.  ..++...+. ..+||.||||||||||.++     +..+.+++...   
T Consensus       135 ---------------------lG~---~~~--~~~~~~~~~-l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~---  184 (242)
T 3t91_A          135 ---------------------IGI---INE--FDVEVVSEQ-LKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGL---  184 (242)
T ss_dssp             -----------------------C---CCT--TCEEEEEEE-CCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTC---
T ss_pred             ---------------------eEe---cCC--CcceEEEEE-eCCCCEEEEECCCcccCCCcccchHHHHHHHHHHh---
Confidence                                 231   111  134555566 7899999999999999998     56666666421   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC-C--CCCeEEEEEEecCC
Q 036852          347 KGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARH-S--TDNVSVVVVDLRKA  406 (408)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~g-s--~DNiTvIVV~l~~~  406 (408)
                                               ....++++++.|++.+...+ +  .||+|+|++++.+.
T Consensus       185 -------------------------~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~  222 (242)
T 3t91_A          185 -------------------------KTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHN  222 (242)
T ss_dssp             -------------------------CCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEEC
T ss_pred             -------------------------cCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEecC
Confidence                                     12345788889999987765 3  59999999999754


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.79  E-value=6.9e-18  Score=158.87  Aligned_cols=199  Identities=18%  Similarity=0.162  Sum_probs=132.9

Q ss_pred             CCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhH----HhHHHHH
Q 036852          122 NPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFT----RMDKEVN  195 (408)
Q Consensus       122 ~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~----~~~~~l~  195 (408)
                      .+.+++++.... +..+.|.+.+.... .        ...+|+|+||+|++..|..++..+... ..+.    ...+.+.
T Consensus        10 ~~~~~~~~~~~~~~~vgGD~y~~~~~~-~--------~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~~~~~l~   80 (242)
T 3pu9_A           10 TIELAVAKTHKFGTRESGDTVELVERP-G--------GGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVRDGAAAR   80 (242)
T ss_dssp             EEEEEEEEECCTTCSSCSEEEEEEECT-T--------SEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred             EEEEEEEecccCccccCCceEEEEEeC-C--------CEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            455666665554 67788998775322 1        235799999999887777766544332 1111    1122222


Q ss_pred             hhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCC
Q 036852          196 EFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGG  273 (408)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG  273 (408)
                      ..+.    .....   .  ...+.+|+++++++  .++++++|+||+++|++|+|++.+|+.+|.|              
T Consensus        81 ~~n~----~l~~~---~--~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~--------------  137 (242)
T 3pu9_A           81 AAHD----FLYAM---R--DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR--------------  137 (242)
T ss_dssp             HHHH----HHHHH---T--TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC--------------
T ss_pred             HHHH----HHHhc---c--CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc--------------
Confidence            2222    11111   1  12478999999996  5789999999999999999999999988762              


Q ss_pred             eEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCC-------HHHHHHHHHHHhhc
Q 036852          274 RVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVS-------NETACGVARMCLRG  346 (408)
Q Consensus       274 ~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls-------~~ei~~iv~~~~~~  346 (408)
                                         +|-   .+.+  .++...+. .++||.|+||||||++..+       .+++..++.    .
T Consensus       138 -------------------lG~---~~~~--~~~~~~~~-l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~----~  188 (242)
T 3pu9_A          138 -------------------IGI---YRHT--RPRVLEFP-AEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVA----G  188 (242)
T ss_dssp             -------------------BSS---CTTC--CCEEEEEE-CCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHC----C
T ss_pred             -------------------ccc---cCCC--CceEEEEE-eCCCCEEEEECcCcccCCCCccccccHHHHHHHHh----c
Confidence                               341   1111  45556666 7899999999999998664       466644331    0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCC---CCCCeEEEEEEecCC
Q 036852          347 KGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARH---STDNVSVVVVDLRKA  406 (408)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~g---s~DNiTvIVV~l~~~  406 (408)
                                               ....++++++.|++.++..+   ..||+|++++++.+.
T Consensus       189 -------------------------~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~  226 (242)
T 3pu9_A          189 -------------------------PETPAQAIADELLEAALVADDGRAGDDMTVVVLRLRNV  226 (242)
T ss_dssp             -------------------------TTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEEC
T ss_pred             -------------------------cCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEecC
Confidence                                     12346788899999998765   679999999999654


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.65  E-value=4.7e-15  Score=140.06  Aligned_cols=199  Identities=14%  Similarity=0.069  Sum_probs=113.4

Q ss_pred             CCCeEEEeecCCCCCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hhhHH--------hH
Q 036852          121 SNPKYGVSSVCGRRRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RSFTR--------MD  191 (408)
Q Consensus       121 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~~~~--------~~  191 (408)
                      +.+.+++..... +...-|.+-+.... .        ...+|+|+||+|+...|..++..+... ..+..        ..
T Consensus        36 ~~~~~~~~~~p~-~~vgGD~yd~~~~~-~--------~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~  105 (255)
T 3f79_A           36 EGLEFSHRIIPS-LYLSGDFVDYFRVD-E--------RRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPE  105 (255)
T ss_dssp             TTEEEEEEEECS-SSSCSEEEEEEEET-T--------TEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC---
T ss_pred             CCEEEEEEEeEh-hhcCceEEeEEEeC-C--------CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            345555544333 45667877443211 1        337899999999766665555433322 11100        01


Q ss_pred             HHHHhhhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecC-CeeEEEeCCeeeccCCCCCCCCHHHHHHH
Q 036852          192 KEVNEFNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGD-SRAVLCRNGKALPLSSDHKPDRPDELNRI  268 (408)
Q Consensus       192 ~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGD-SR~yl~r~g~~~~LT~DHs~~~~~e~~ri  268 (408)
                      .........++...+    .  ....+++|+++++++  .++++++|+|+ ++.|++++|++.+|+.+|.|         
T Consensus       106 ~~p~~~l~~ln~~l~----~--~~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~---------  170 (255)
T 3f79_A          106 FKPSEVLAHINRGLI----N--TKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP---------  170 (255)
T ss_dssp             -CHHHHHHHHHHHHB----T--TBSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC-------------
T ss_pred             CCHHHHHHHHHHHHH----h--cCCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce---------
Confidence            111222222222221    1  124589999999995  57899999999 56999999999999877652         


Q ss_pred             HHcCCeEEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHH-------HHHHHH
Q 036852          269 QEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNET-------ACGVAR  341 (408)
Q Consensus       269 ~~~GG~v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~e-------i~~iv~  341 (408)
                                              ||-.   +.+  .++...+. ..+||.|+||||||++.++.++       +.+++.
T Consensus       171 ------------------------lG~~---~~~--~~~~~~~~-l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~  220 (255)
T 3f79_A          171 ------------------------VGLF---DDA--TYDDRVME-LPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVA  220 (255)
T ss_dssp             -------------------------CCS---SCC--CCCC---B-CCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHH
T ss_pred             ------------------------EEEc---CCC--ceEEEEEE-ECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHH
Confidence                                    2311   111  23334455 7789999999999999998887       777775


Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEEec
Q 036852          342 MCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVDLR  404 (408)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~l~  404 (408)
                      ....                             ..++++..|. .+...+..||+|+|+|+.+
T Consensus       221 ~~~~-----------------------------~~~~~~~~l~-~~~~~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          221 AAGG-----------------------------TLDGLRQVFG-LANLAEMPDDIALLVLSRN  253 (255)
T ss_dssp             HHSC-----------------------------SSHHHHHHC------CCSSSCEEEEEEEEC
T ss_pred             hcCC-----------------------------CHHHHHHHHH-hccCCCCCCCEEEEEEEec
Confidence            4211                             1245566665 5677888999999999875


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.64  E-value=1.1e-14  Score=132.19  Aligned_cols=186  Identities=15%  Similarity=0.103  Sum_probs=120.9

Q ss_pred             CCCeEEEeecCCC-CCCceeeEeccCCcccccccccccCceEEEEEeCCCCcHHHHHHHHHHHHh-hh--hHHhHHHHHh
Q 036852          121 SNPKYGVSSVCGR-RRDMEDAVAVHPSFFRQNFETAADELHYFGVYDGHGCSHVAMRCRERLHEL-RS--FTRMDKEVNE  196 (408)
Q Consensus       121 ~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~lfaVaDGhGG~~~a~~a~~~l~~~-~~--~~~~~~~l~~  196 (408)
                      ..+.+|..+.... ...+-|.|.+...  .        +..+++|+||+|....|..++..+... ..  .....+.+  
T Consensus         2 ~~~~~~~~~~p~~~~~v~GD~y~~~~~--~--------~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~~~~p~~il--   69 (193)
T 3zt9_A            2 EKLEVGIYTRAREGEIACGDACLVKRV--E--------GVIFLAVGDGIGHGPEAARAAEIAIASMESSMNTGLVNIF--   69 (193)
T ss_dssp             CCCCEEEEEECCTTCSSCSEEEEEEEE--T--------TEEEEEEEEESSSHHHHHHHHHHHHHHHHHHTTSCHHHHH--
T ss_pred             CccEEEEEEeccCCCCCCCCeEEEEEe--C--------CEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcccCCHHHHH--
Confidence            3566777777654 5678899987542  1        337899999999666555555433322 11  01111111  


Q ss_pred             hhhhhHHHhhhhhhcCCCCCCCCcceEEEEEe--CCEEEEEEecCCeeEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCe
Q 036852          197 FNEGVVKATCRCELQTPECDAVGSTAVVAIVT--PDKIVIANCGDSRAVLCRNGKALPLSSDHKPDRPDELNRIQEAGGR  274 (408)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~  274 (408)
                        ..++...    .     ...|.|++++.++  .+++.++|+|+++.|++|+|....+...+.                
T Consensus        70 --~~ln~~l----~-----~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g----------------  122 (193)
T 3zt9_A           70 --QLCHREL----R-----GTRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPG----------------  122 (193)
T ss_dssp             --HHHHHHH----T-----TSSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCC----------------
T ss_pred             --HHHHHHH----h-----ccCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCC----------------
Confidence              1111111    1     1247888888887  468999999999999999987765542111                


Q ss_pred             EEeecCCcccCccccccccCCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCC
Q 036852          275 VIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSNETACGVARMCLRGKGRAPLAA  354 (408)
Q Consensus       275 v~~~~~~r~~~~~~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~  354 (408)
                                       .+|..   +.+  .++...+. ..+||.|+|+||||++.++.+++..++              
T Consensus       123 -----------------~lG~~---~~~--~~~~~~~~-l~~gd~l~l~sDGl~e~~~~~~~~~~~--------------  165 (193)
T 3zt9_A          123 -----------------ILGYN---YPH--QLLIAKGS-YQEGDLFLIHSDGIQEGAVPLALLANY--------------  165 (193)
T ss_dssp             -----------------BBTTB---CCS--SCCCEEEE-CCTTCEEEEECTTSCTTCSCGGGGGCT--------------
T ss_pred             -----------------ceecc---CCc--cceeEEec-cCCCCEEEEECCCCCCccChhhhhchh--------------
Confidence                             13311   100  23445555 789999999999999999988754432              


Q ss_pred             CCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEE
Q 036852          355 TPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVD  402 (408)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~  402 (408)
                                        ...++++|+.|++.+  .+..||+||+|++
T Consensus       166 ------------------~~~~~~~a~~l~~~~--~~~~Dd~tvlv~r  193 (193)
T 3zt9_A          166 ------------------RLTAEELVRLIGEKY--GRRDDDVAVIVAR  193 (193)
T ss_dssp             ------------------TSCHHHHHHHHHHHH--CCTTSCEEEEEEC
T ss_pred             ------------------cCCHHHHHHHHHHHh--CcCCCCeEEEEEC
Confidence                              224688899999987  4579999999985


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.16  E-value=4.6e-09  Score=105.61  Aligned_cols=132  Identities=15%  Similarity=0.168  Sum_probs=83.4

Q ss_pred             CCCcceEEEEEe--CCEEEEEEecCCeeEEEe-CCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCcccccccc
Q 036852          217 AVGSTAVVAIVT--PDKIVIANCGDSRAVLCR-NGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAI  293 (408)
Q Consensus       217 ~~GtT~vv~~i~--~~~l~vanvGDSR~yl~r-~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRai  293 (408)
                      .+++|+++++++  .+.+.++|+|..+.|+++ +|++..+..++.+                                .+
T Consensus       117 ~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~--------------------------------pl  164 (399)
T 3ke6_A          117 SKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG--------------------------------PL  164 (399)
T ss_dssp             CTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC--------------------------------CT
T ss_pred             CcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc--------------------------------ce
Confidence            478999998886  478999999999999998 7777777665541                                22


Q ss_pred             CCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCH------HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCC
Q 036852          294 GDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSN------ETACGVARMCLRGKGRAPLAATPGAAPDVSNNNG  367 (408)
Q Consensus       294 Gd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~------~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (408)
                      |-.   +    ......+. ..+||.|+|+||||+|....      +.+.+++..........                 
T Consensus       165 G~~---~----~~~~~~~~-l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~-----------------  219 (399)
T 3ke6_A          165 GSG---T----GFPVRSEV-LNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGF-----------------  219 (399)
T ss_dssp             TSS---C----CCCCEEEE-CCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------------------
T ss_pred             ECC---C----CceeEEEE-ECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccc-----------------
Confidence            310   0    12234455 78999999999999998765      44555554322110000                 


Q ss_pred             CCCCccchHHHHHHHHHHHHHh-CCCCCCeEEEEEEecC
Q 036852          368 SGETTDKCCSDASLLLTKLALA-RHSTDNVSVVVVDLRK  405 (408)
Q Consensus       368 ~~~~~~~~~~~aA~~L~~~Al~-~gs~DNiTvIVV~l~~  405 (408)
                      .........+.++..+++.... .+..||+||++++++.
T Consensus       220 ~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~  258 (399)
T 3ke6_A          220 VLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRA  258 (399)
T ss_dssp             -----CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECC
T ss_pred             cccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeC
Confidence            0000122334444444444333 4678999999999875


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.20  E-value=1.5e-05  Score=79.21  Aligned_cols=78  Identities=19%  Similarity=0.197  Sum_probs=50.0

Q ss_pred             CCCcceEEEEEe--CCEEEEEEecCCe-eEEEeCCeeeccCCCCCCCCHHHHHHHHHcCCeEEeecCCcccCcccccccc
Q 036852          217 AVGSTAVVAIVT--PDKIVIANCGDSR-AVLCRNGKALPLSSDHKPDRPDELNRIQEAGGRVIYWDGPRVLGVLAMSRAI  293 (408)
Q Consensus       217 ~~GtT~vv~~i~--~~~l~vanvGDSR-~yl~r~g~~~~LT~DHs~~~~~e~~ri~~~GG~v~~~~~~r~~~~~~ltRai  293 (408)
                      .+..|+++++++  .+.+.++|.|-.. .|+.++|.+..|.....                                 .|
T Consensus       264 ~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~---------------------------------pl  310 (394)
T 3eq2_A          264 GKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL---------------------------------PV  310 (394)
T ss_dssp             CCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC-----------------------------------CC
T ss_pred             CcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc---------------------------------ee
Confidence            457888888887  4689999999854 77788888877754322                                 12


Q ss_pred             CCCCCCCCccCCCeEEEEeccCCCCEEEEEcCCCCCCCCH
Q 036852          294 GDNYLKPYVSCEPEVTVVDRTAADDCLILATDGLWDVVSN  333 (408)
Q Consensus       294 Gd~~~k~~v~~~Pdi~~~~~~~~gd~lIL~SDGlwd~ls~  333 (408)
                      |-.   +..  ......+. ..+||.|+|.||||.|....
T Consensus       311 G~~---~~~--~~~~~~~~-l~~gd~l~l~TDG~~e~~~~  344 (394)
T 3eq2_A          311 GLF---DDA--TYDDRVME-LPPSFSLSLFSDGILDVLPG  344 (394)
T ss_dssp             SCC---CCC----CCEEEE-CCSSCEEEECSSCCCC----
T ss_pred             Eec---CCC--ceEEEEEE-eCCCCEEEEECCCcccccCc
Confidence            311   100  11223445 78899999999999997544


No 25 
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=52.01  E-value=2.6  Score=24.24  Aligned_cols=26  Identities=35%  Similarity=0.528  Sum_probs=12.2

Q ss_pred             HhhhccceeeeeeecCCCCCCchhhHHHhhhhc
Q 036852           25 ARRRRMEIRRFKFVSGVIPSDTEENERLKRQKL   57 (408)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   57 (408)
                      +||||-.-|++..-.|..+|       +||++|
T Consensus         2 srrrrprkrplewdedeepp-------rkrkrl   27 (28)
T 3ukw_C            2 SRRRRPRKRPLEWDEDEEPP-------RKRKRL   27 (28)
T ss_dssp             -----CCCCCCCCCGGGSCC-------SSCCCC
T ss_pred             ccccccccCCcccccccCcc-------hhhhcc
Confidence            46666666776654443332       777764


No 26 
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=38.31  E-value=40  Score=31.08  Aligned_cols=24  Identities=25%  Similarity=0.307  Sum_probs=20.9

Q ss_pred             EEEEEe-CCCCcHHHHHHHHHHHHh
Q 036852          161 YFGVYD-GHGCSHVAMRCRERLHEL  184 (408)
Q Consensus       161 lfaVaD-GhGG~~~a~~a~~~l~~~  184 (408)
                      -.|||| |+||-.+++.+.+.+...
T Consensus         9 pIgvfDSGvGGLtv~~~i~~~lp~~   33 (268)
T 3out_A            9 PIGVFDSGIGGLTIVKNLMSILPNE   33 (268)
T ss_dssp             CEEEEESSSTTHHHHHHHHHHCTTC
T ss_pred             cEEEEECCCChHHHHHHHHHHCCCC
Confidence            479999 999999999999888754


No 27 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=35.70  E-value=0.81  Score=47.24  Aligned_cols=78  Identities=8%  Similarity=-0.067  Sum_probs=53.1

Q ss_pred             ccccccCCCCCCCCccCCCeEEEEeccCC--CC----EEEEEcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 036852          288 AMSRAIGDNYLKPYVSCEPEVTVVDRTAA--DD----CLILATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPD  361 (408)
Q Consensus       288 ~ltRaiGd~~~k~~v~~~Pdi~~~~~~~~--gd----~lIL~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~  361 (408)
                      .++|++|   ++..+  +.|+.... .+.  |+    .|++++   |+.+...++.+++......               
T Consensus        43 ~l~~~~~---l~~~~--~~d~~~~~-~~~~ig~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~~---------------   98 (543)
T 3c4z_A           43 PLSKCEA---LRESL--DLGFEGMC-LEQPIGKRLFQQFLRTH---EQHGPALQLWKDIEDYDTA---------------   98 (543)
T ss_dssp             CGGGGHH---HHHHS--CCCHHHHH-TSSHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHTS---------------
T ss_pred             CchHHHH---HHhcc--ccCHHHhh-ccCcccHHHHHHHHhcC---CchhHHHHHHhhhhhhccC---------------
Confidence            5688888   33322  33333333 445  66    566666   8899998888888764422               


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEE
Q 036852          362 VSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVV  399 (408)
Q Consensus       362 ~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvI  399 (408)
                                .+...+.+|+.|++.|+..++.||++++
T Consensus        99 ----------~~~~~~~~~~~l~~~~~~~~~~d~~~~~  126 (543)
T 3c4z_A           99 ----------DDALRPQKAQALRAAYLEPQAQLFCSFL  126 (543)
T ss_dssp             ----------CTTTHHHHHHHHHHHHTSTTCTTCCTTS
T ss_pred             ----------chhhHHHHHHHHHHHhhCchhhhhhccC
Confidence                      1223467888899999999999999987


No 28 
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=32.24  E-value=58  Score=30.03  Aligned_cols=24  Identities=25%  Similarity=0.273  Sum_probs=21.2

Q ss_pred             EEEEEe-CCCCcHHHHHHHHHHHHh
Q 036852          161 YFGVYD-GHGCSHVAMRCRERLHEL  184 (408)
Q Consensus       161 lfaVaD-GhGG~~~a~~a~~~l~~~  184 (408)
                      -.|||| |+||-.+.+.+.+.++..
T Consensus         7 ~IgvfDSGvGGltv~~~i~~~lP~~   31 (269)
T 3ist_A            7 AIGFIDSGVGGLTVVREVLKQLPHE   31 (269)
T ss_dssp             CEEEEESSSTTHHHHHHHHHHCTTC
T ss_pred             cEEEEECCccHHHHHHHHHHHCCCC
Confidence            479999 999999999999988764


No 29 
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=30.60  E-value=42  Score=31.14  Aligned_cols=25  Identities=28%  Similarity=0.170  Sum_probs=21.5

Q ss_pred             eEEEEEe-CCCCcHHHHHHHHHHHHh
Q 036852          160 HYFGVYD-GHGCSHVAMRCRERLHEL  184 (408)
Q Consensus       160 ~lfaVaD-GhGG~~~a~~a~~~l~~~  184 (408)
                      .-.|||| |+||-.+.+.+.+.++..
T Consensus        25 ~~IgvfDSGvGGLtv~~~i~~~lP~e   50 (274)
T 3uhf_A           25 MKIGVFDSGVGGLSVLKSLYEARLFD   50 (274)
T ss_dssp             CEEEEEESSSTTHHHHHHHHHTTCCS
T ss_pred             CeEEEEECCCChHHHHHHHHHHCCCC
Confidence            4589999 999999999999888654


No 30 
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=22.02  E-value=2e+02  Score=22.65  Aligned_cols=57  Identities=18%  Similarity=0.164  Sum_probs=40.8

Q ss_pred             EcCCCCCCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhCCCCCCeEEEEEE
Q 036852          323 ATDGLWDVVSNETACGVARMCLRGKGRAPLAATPGAAPDVSNNNGSGETTDKCCSDASLLLTKLALARHSTDNVSVVVVD  402 (408)
Q Consensus       323 ~SDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aA~~L~~~Al~~gs~DNiTvIVV~  402 (408)
                      .||-|-+.++..++.+.+.......                        .-...+.+|..+.+..+. -  ..+.-|-|+
T Consensus        44 ~sDdl~~tvdY~~v~~~i~~~v~~~------------------------~~~LiE~lA~~Ia~~~l~-~--~~v~~v~V~   96 (119)
T 1nbu_A           44 NSDDLADTYDYVRLASRAAEIVAGP------------------------PRKLIETVGAEIADHVMD-D--QRVHAVEVA   96 (119)
T ss_dssp             HHCCGGGSCCHHHHHHHHHHHHHSS------------------------CCSCHHHHHHHHHHHHHT-S--TTCCEEEEE
T ss_pred             ccccchhccCHHHHHHHHHHHHhcC------------------------CcccHHHHHHHHHHHHhc-C--CCccEEEEE
Confidence            3789999999999999999876653                        223457778888887776 2  345556666


Q ss_pred             ecCC
Q 036852          403 LRKA  406 (408)
Q Consensus       403 l~~~  406 (408)
                      +.|+
T Consensus        97 v~Kp  100 (119)
T 1nbu_A           97 VHKP  100 (119)
T ss_dssp             EECT
T ss_pred             EECC
Confidence            6554


Done!