Query 036854
Match_columns 167
No_of_seqs 185 out of 640
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 09:52:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036854.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036854hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l9f_A CALE8, meacp; transfera 77.0 3.8 0.00013 30.1 4.9 52 112-163 47-101 (102)
2 3lto_A Mevalonate diphosphate 64.2 5.8 0.0002 33.9 3.8 45 109-154 254-307 (323)
3 3drz_A BTB/POZ domain-containi 63.6 24 0.00082 24.9 6.5 63 87-155 5-72 (107)
4 2plg_A TLL0839 protein; hypoth 62.3 14 0.00049 29.0 5.6 67 86-153 55-140 (163)
5 1vhf_A Periplasmic divalent ca 59.3 8.6 0.0003 28.5 3.6 73 88-163 36-111 (113)
6 3qf7_D MRE11; ABC-ATPase, ATPa 58.8 5.2 0.00018 25.8 1.9 40 114-163 11-50 (50)
7 2c0s_A Conserved domain protei 58.2 4 0.00014 27.6 1.4 35 118-153 16-50 (64)
8 3fkd_A L-threonine-O-3-phospha 57.5 7.7 0.00026 30.9 3.3 32 132-163 315-350 (350)
9 2al3_A TUG long isoform; TUG U 51.2 14 0.00048 26.6 3.4 40 88-132 9-48 (90)
10 1und_A Advillin, P92; actin bi 49.4 4.2 0.00014 24.8 0.3 19 109-127 1-19 (37)
11 2jva_A Peptidyl-tRNA hydrolase 44.8 9.8 0.00034 28.0 1.8 59 103-163 40-107 (108)
12 2vpk_A Myoneurin; transcriptio 43.4 34 0.0012 23.4 4.4 47 102-155 32-83 (116)
13 2vkp_A BTB/POZ domain-containi 42.9 39 0.0013 22.6 4.6 60 91-155 12-74 (109)
14 1vd2_A Protein kinase C, IOTA 42.3 27 0.00093 24.8 3.8 48 100-152 16-75 (89)
15 1r29_A B-cell lymphoma 6 prote 41.6 35 0.0012 23.7 4.3 50 102-155 39-92 (127)
16 2kw2_A Specialized acyl carrie 40.1 19 0.00066 24.8 2.7 22 111-132 35-56 (101)
17 2bzb_A Conserved domain protei 39.8 5.2 0.00018 26.8 -0.4 33 118-151 16-48 (62)
18 1ji7_A ETS-related protein TEL 39.8 8.7 0.0003 27.2 0.8 42 117-164 46-87 (89)
19 3ga1_A Nucleus accumbens-assoc 39.1 54 0.0019 22.9 5.0 46 102-154 43-92 (129)
20 1s1g_A Potassium voltage-gated 36.6 29 0.00098 25.6 3.3 64 85-155 10-75 (124)
21 1xvq_A Thiol peroxidase; thior 36.2 15 0.0005 26.9 1.6 24 140-163 152-175 (175)
22 3asa_A LL-diaminopimelate amin 33.2 51 0.0018 26.7 4.6 50 114-163 341-398 (400)
23 3ei9_A LL-diaminopimelate amin 33.1 44 0.0015 27.4 4.2 47 115-161 377-431 (432)
24 2if5_A Zinc finger and BTB dom 33.0 78 0.0027 21.5 5.0 51 102-155 35-88 (120)
25 3frk_A QDTB; aminotransferase, 32.7 25 0.00086 28.2 2.6 31 133-163 339-373 (373)
26 2nz0_B Potassium voltage-gated 31.1 37 0.0013 25.6 3.1 64 85-155 32-97 (140)
27 3ib6_A Uncharacterized protein 29.6 18 0.0006 26.7 1.1 24 140-163 166-189 (189)
28 1y74_B MLIN-2/CASK, peripheral 28.7 22 0.00074 22.1 1.3 20 109-128 26-49 (50)
29 2xko_C PIPX, global nitrogen r 28.1 8.3 0.00028 27.9 -0.9 13 109-121 5-17 (89)
30 2nuh_A Periplasmic divalent ca 27.2 51 0.0017 24.4 3.3 44 112-155 63-106 (118)
31 2bkf_A Zinc-finger protein NBR 27.2 1.5E+02 0.0051 21.1 5.6 51 100-153 16-75 (87)
32 1yu8_X Villin; alpha helix, 3- 26.8 16 0.00054 24.9 0.3 20 109-128 31-50 (67)
33 3eb2_A Putative dihydrodipicol 25.8 66 0.0023 26.5 4.1 44 119-163 254-300 (300)
34 3r4d_B Spike glycoprotein; imm 25.1 15 0.00052 31.1 0.0 57 84-147 208-278 (288)
35 3ohu_A Transcription regulator 25.0 71 0.0024 22.0 3.6 48 102-154 42-93 (125)
36 1ujs_A Actin-binding LIM prote 24.9 19 0.00066 25.8 0.5 20 109-128 46-65 (88)
37 1qzp_A Dematin; villin headpie 24.2 14 0.00047 25.2 -0.3 19 109-127 32-50 (68)
38 3b84_A Zinc finger and BTB dom 24.1 1.1E+02 0.0038 20.9 4.5 47 102-155 34-83 (119)
39 2bec_A Calcineurin B homologou 23.5 25 0.00086 25.6 1.0 52 111-166 148-202 (202)
40 1wj6_A KIAA0049 protein, RSGI 23.2 1.6E+02 0.0054 21.6 5.2 56 91-153 19-83 (101)
41 3dev_A SH1221; alpha-beta prot 23.1 86 0.003 26.2 4.3 55 103-163 263-320 (320)
42 2l82_A Designed protein OR32; 22.1 99 0.0034 23.7 4.1 42 120-163 118-161 (162)
43 2k6m_S Supervillin; SVHP, HP, 21.8 18 0.0006 24.6 -0.2 20 109-128 31-50 (67)
44 3drx_A BTB/POZ domain-containi 21.3 1.2E+02 0.0042 24.3 4.7 64 86-155 10-78 (202)
45 3htm_A Speckle-type POZ protei 20.7 1.3E+02 0.0046 21.4 4.5 51 102-155 44-97 (172)
46 4h14_A Spike glycoprotein; bet 20.7 53 0.0018 28.2 2.5 23 127-149 258-282 (290)
47 1mdo_A ARNB aminotransferase; 20.5 49 0.0017 26.4 2.2 30 133-162 357-390 (393)
48 2q81_A MIZ-1 protein; BTB/POZ 20.1 1.4E+02 0.0048 20.4 4.3 46 102-155 37-85 (119)
No 1
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=77.03 E-value=3.8 Score=30.09 Aligned_cols=52 Identities=19% Similarity=0.263 Sum_probs=30.7
Q ss_pred CchHHHHHHHhhHHhcCccCCC-c--eeecCcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 112 NHPLFGELLKQAERVYGFNHPG-G--ITIPCRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 112 nhPlF~eLL~~AeEEfGf~~~G-~--L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
+.=-+-+|+-..|++||..-+. + +.+.-=-+.-++|...+....+-.+||||
T Consensus 47 DSLd~VeLVm~lE~~fGi~ipd~~e~~~~~TV~d~vdyI~~~~~~~~~~~~~~~~ 101 (102)
T 2l9f_A 47 SSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEALEAREREAPHLEHHHHH 101 (102)
T ss_dssp CHHHHHHHHHHHHHHHTCSTTSSCSCCTTCBHHHHHHHHHHHHHTCCSCCCCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCccHHHHHHccHHHHHHHHHHhhcccchhhhcccc
Confidence 4556789999999999987421 2 22222233445555556555555555544
No 2
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=64.20 E-value=5.8 Score=33.87 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=29.5
Q ss_pred eccCchHHHHHHHhhHH---hcC----ccCC-Cc-eeecCcHHHHHHHHHHHhcC
Q 036854 109 IYFNHPLFGELLKQAER---VYG----FNHP-GG-ITIPCRISEFEKVKTRIDAW 154 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeE---EfG----f~~~-G~-L~IPC~~~~Fe~vl~~i~~~ 154 (167)
.|| .|...++++.+++ +.| |..| || +.+=|..+.-+.|...+++.
T Consensus 254 ~~l-~p~s~~i~~~v~~~r~~~G~~~~~tsgAGPnv~~l~~~~~~~~v~~~l~~~ 307 (323)
T 3lto_A 254 SYI-TDNTLHILSVIEKFWNEKGDGPVVTMDAGPNVHLLYRSDQTDLARQFKSDH 307 (323)
T ss_dssp CSC-CHHHHHHHHHHHHHHHHHSCCCEEECCSSSCEEEEECGGGHHHHHHHHHHH
T ss_pred eec-CchHHHHHHHHHHHHHhCCCeEEEEECCCCCeEEEEecccHHHHHHHHHHH
Confidence 344 5777788888766 556 4443 66 55558777777777777654
No 3
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=63.64 E-value=24 Score=24.88 Aligned_cols=63 Identities=13% Similarity=0.099 Sum_probs=46.0
Q ss_pred CCeEEEEEcccCCCceeEEEeeeccC-ch--HHHHHHHhhHHhcC--ccCCCceeecCcHHHHHHHHHHHhcCC
Q 036854 87 KGHLAVYVGESDDEARRVFVPVIYFN-HP--LFGELLKQAERVYG--FNHPGGITIPCRISEFEKVKTRIDAWD 155 (167)
Q Consensus 87 kG~~aVYVG~~~~~~rRfvVP~~yLn-hP--lF~eLL~~AeEEfG--f~~~G~L~IPC~~~~Fe~vl~~i~~~~ 155 (167)
...+.+-|| ..+|.+..+-|. +| .|..|.... .++. .+.+|.+-|..+...|++||..+..+.
T Consensus 5 ~~~v~LNVG-----G~~f~t~~~TL~~~p~s~L~~~~~~~-~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~ 72 (107)
T 3drz_A 5 SKWVRLNVG-----GTYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 72 (107)
T ss_dssp CCEEEEEET-----TEEEEEEHHHHTSSTTSHHHHHHTTC-GGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSC
T ss_pred CCEEEEEEC-----CEEEEECHHHHhcCCCcchhHHHhcC-CCCCcCCCCCceEEecCChHHHHHHHHHhCCCe
Confidence 456778888 489999988775 33 667765422 1232 335699999999999999999998764
No 4
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=62.33 E-value=14 Score=28.99 Aligned_cols=67 Identities=15% Similarity=0.308 Sum_probs=42.3
Q ss_pred CCCeEEEEEc---ccCCCceeEEEeeecc----CchHHHHHHHhhHH-----hcCccCCCceee-------cCcHHHHHH
Q 036854 86 PKGHLAVYVG---ESDDEARRVFVPVIYF----NHPLFGELLKQAER-----VYGFNHPGGITI-------PCRISEFEK 146 (167)
Q Consensus 86 pkG~~aVYVG---~~~~~~rRfvVP~~yL----nhPlF~eLL~~AeE-----EfGf~~~G~L~I-------PC~~~~Fe~ 146 (167)
..|-+.|.|. +.+++.-|...|+-=+ --++++.||++--. -||..+ +.|.+ .|+..+|..
T Consensus 55 ~~GSveV~V~l~g~~d~~~L~V~SPV~~lP~~~~~~l~~~LLE~N~~~t~~arFaI~~-n~V~~v~~r~ls~Ld~~E~~~ 133 (163)
T 2plg_A 55 RYGSAEVFVQLSGHTEEDFLTIWSPVLPLPVADELALYRKLLTLNWLTTFEAHFAIAE-EQVQVVASRTLGGITAGEISR 133 (163)
T ss_dssp EETTEEEEEEECCSSTTCEEEEEEEEEESCCTTHHHHHHHHHHHTTTTTTTCEEEEET-TEEEEEEEEECTTCCHHHHHH
T ss_pred EECCEEEEEEecCCCCCCEEEEEEEeccCchhhHHHHHHHHHHhccccccceEEEEEC-CEEEEEEEEEcccCCHHHHHH
Confidence 3444555553 3345666666666554 35788999998643 455554 44332 389999999
Q ss_pred HHHHHhc
Q 036854 147 VKTRIDA 153 (167)
Q Consensus 147 vl~~i~~ 153 (167)
++..+..
T Consensus 134 aIt~V~~ 140 (163)
T 2plg_A 134 LITIVAT 140 (163)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877655
No 5
>1vhf_A Periplasmic divalent cation tolerance protein; structural genomics, unknown function; 1.54A {Thermotoga maritima} SCOP: d.58.5.2
Probab=59.31 E-value=8.6 Score=28.50 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=44.1
Q ss_pred CeEEEEE--ccc-CCCceeEEEeeeccCchHHHHHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 88 GHLAVYV--GES-DDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 88 G~~aVYV--G~~-~~~~rRfvVP~~yLnhPlF~eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
+.-.+|. |+- +++.-..++-+ ....|.+|.+.-.+.--|+-+-.|.+|.+...=+++-|..+......+||||
T Consensus 36 ~i~S~Y~W~G~ie~~~E~~l~iKT---~~~~~~~l~~~I~~~HpYevPeIi~lpi~~g~~~Yl~Wi~~~t~~~~~~~~~ 111 (113)
T 1vhf_A 36 EIRSGYWWKGEIVQDKEWAAIFKT---TEEKEKELYEELRKLHPYETPAIFTLKVENVLTEYMNWLRESVLEGGSHHHH 111 (113)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEE---EGGGHHHHHHHHHHHCSSSSCCEEEEECSCCCHHHHHHHHHHC---------
T ss_pred eeeEEEEECCEeeeCeEEEEEEEE---CHHHHHHHHHHHHHHCCCcCCEEEEEEccCCCHHHHHHHHHHcCCCCccccc
Confidence 6667787 321 11222233332 3567889999999988898888999999877777777877766555544443
No 6
>3qf7_D MRE11; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima}
Probab=58.81 E-value=5.2 Score=25.80 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=20.9
Q ss_pred hHHHHHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 114 PLFGELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 114 PlF~eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
.+|.|-++.-++. ++.- ...|+.++..+++++.+++++||
T Consensus 11 elfkey~k~r~~~----he~l------~k~~~ell~evkkseaghhhhhh 50 (50)
T 3qf7_D 11 ELFKEYLKKREEN----HEKL------LKILDELLDEVKKSEAGHHHHHH 50 (50)
T ss_dssp HHHHHHHHHHCTT----HHHH------HHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHhh----HHHH------HHHHHHHHHHHHHhhccccccCC
Confidence 4677777665542 2222 35799999999999888877776
No 7
>2c0s_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=58.18 E-value=4 Score=27.57 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=22.8
Q ss_pred HHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhc
Q 036854 118 ELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDA 153 (167)
Q Consensus 118 eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~ 153 (167)
+|.+.+ +++||.++-+|.++.+.+........+..
T Consensus 16 eL~~l~-~k~Gl~~~~vI~~SQeLD~LIn~Y~k~~~ 50 (64)
T 2c0s_A 16 ELIYLV-EKYGFTHHKVISFSQELDRLLNLLIELKT 50 (64)
T ss_dssp HHHHHH-HHTCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444 78999987777777777766555444433
No 8
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=57.46 E-value=7.7 Score=30.85 Aligned_cols=32 Identities=16% Similarity=0.069 Sum_probs=16.2
Q ss_pred CCceeecCc----HHHHHHHHHHHhcCCCCCCCCCC
Q 036854 132 PGGITIPCR----ISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 132 ~G~L~IPC~----~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
++.|.|.+. .+.|...+..+..++.+++||||
T Consensus 315 ~~~iRis~~~~~~~~~l~~al~~~~~~~~~~~~~~~ 350 (350)
T 3fkd_A 315 ESYVRITTQRPAQNQLFIKALETFLEKYEGHHHHHH 350 (350)
T ss_dssp TTEEEEECCCHHHHHHHHHHHHHHHTC---------
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHHHhccccccCC
Confidence 456666542 34788888888889899888887
No 9
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=51.22 E-value=14 Score=26.57 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=28.8
Q ss_pred CeEEEEEcccCCCceeEEEeeeccCchHHHHHHHhhHHhcCccCC
Q 036854 88 GHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP 132 (167)
Q Consensus 88 G~~aVYVG~~~~~~rRfvVP~~yLnhPlF~eLL~~AeEEfGf~~~ 132 (167)
|-.++++.. +.+|+.|++ -..-.+.++|++|-+.|||+.+
T Consensus 9 ~m~v~Vl~~---n~rr~~VKv--tp~t~L~~VL~eaC~K~gl~~~ 48 (90)
T 2al3_A 9 GSAVSVLAP---NGRRHTVKV--TPSTVLLQVLEDTCRRQDFNPS 48 (90)
T ss_dssp -CCEEEECT---TSCEEEECC--CTTSBHHHHHHHHHHHTTCCGG
T ss_pred ccEEEEEcC---CCcEEEEEE--CCCCCHHHHHHHHHHHhCCChh
Confidence 334444554 678999988 3455778999999999999753
No 10
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=49.36 E-value=4.2 Score=24.84 Aligned_cols=19 Identities=11% Similarity=0.247 Sum_probs=17.1
Q ss_pred eccCchHHHHHHHhhHHhc
Q 036854 109 IYFNHPLFGELLKQAERVY 127 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeEEf 127 (167)
.||+...|++++.|+.+||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF 19 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQF 19 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHH
T ss_pred CCCCHHHHHHHHCcCHHHH
Confidence 4899999999999999997
No 11
>2jva_A Peptidyl-tRNA hydrolase domain protein; GFT hydrolase, structural genomics, PSI-2, protein STRU initiative; NMR {Pseudomonas syringae PV}
Probab=44.76 E-value=9.8 Score=27.98 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=34.2
Q ss_pred eEEEeeeccCchHHHHHHHhhHHhcCccCCCceeecCcH---------HHHHHHHHHHhcCCCCCCCCCC
Q 036854 103 RVFVPVIYFNHPLFGELLKQAERVYGFNHPGGITIPCRI---------SEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 103 RfvVP~~yLnhPlF~eLL~~AeEEfGf~~~G~L~IPC~~---------~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
||-|..+.|.-.+-..|++.+..- ...+|.|+|-|+. ..++.+..+|......-+||||
T Consensus 40 ~~d~~~s~lP~~~k~rl~~~~~~r--i~~~G~ivv~~q~~RSQ~~Nr~~Al~rL~~~l~~a~~~~~~~~~ 107 (108)
T 2jva_A 40 RFDINASSLPPFYKERLLALNDSR--ITSDGVIVLKAQQYRTQEQNRADALLRLSELIVNAAKLEHHHHH 107 (108)
T ss_dssp EEETTTSCCCHHHHHHHHTCSCTT--BCTTCEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHHSSSCSSC
T ss_pred EEEcccccCCHHHHHHHHHHhccc--cccCCcEEEEECCcCCHHHHHHHHHHHHHHHHHHHccCcccccC
Confidence 344433335444555555444222 3457899999974 5678888887776554444444
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=43.43 E-value=34 Score=23.39 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=36.2
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeec---CcHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIP---CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IP---C~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|+.++... .+..|.|+ .+.+.|+.++..+=.+.
T Consensus 32 ~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~ 83 (116)
T 2vpk_A 32 FQFKAHRNVLASFSEYFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGT 83 (116)
T ss_dssp EEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSC
T ss_pred EEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCC
Confidence 5777777776 579999998654 35678887 78999999998876653
No 13
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=42.86 E-value=39 Score=22.56 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=40.9
Q ss_pred EEEEcccCCCceeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeec-CcHHHHHHHHHHHhcCC
Q 036854 91 AVYVGESDDEARRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIP-CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 91 aVYVG~~~~~~rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IP-C~~~~Fe~vl~~i~~~~ 155 (167)
.+.||. +++.+.|-+.-..| ..|.|+.++...-.|- . ..|.|| .+.+.|+.++..+=.+.
T Consensus 12 ~l~v~~-~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~---~-~~i~l~~~~~~~f~~~l~~iYt~~ 74 (109)
T 2vkp_A 12 HFVVGP-PGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV---K-SEIHIPDVEPAAFLILLKYMYSDE 74 (109)
T ss_dssp EEEESS-TTSCEEEEECHHHHHHHCHHHHHHHC---------C-CEEEETTSCHHHHHHHHHHHHHCC
T ss_pred EEEECC-CCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC---C-CeEEeCCCCHHHHHHHHHHHcCCC
Confidence 444553 23458899888887 6899999997543332 2 678897 58999999998876653
No 14
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=42.33 E-value=27 Score=24.76 Aligned_cols=48 Identities=10% Similarity=0.091 Sum_probs=33.1
Q ss_pred CceeEEEeeeccCchHHHHHHHhhHHhcCccCCC------------ceeecCcHHHHHHHHHHHh
Q 036854 100 EARRVFVPVIYFNHPLFGELLKQAERVYGFNHPG------------GITIPCRISEFEKVKTRID 152 (167)
Q Consensus 100 ~~rRfvVP~~yLnhPlF~eLL~~AeEEfGf~~~G------------~L~IPC~~~~Fe~vl~~i~ 152 (167)
+-.++.||. ..-|++|.++-.+-|++..+. +++|.=+.++-| ++...+
T Consensus 16 di~~~~v~~----~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~e-Al~l~~ 75 (89)
T 1vd2_A 16 DIMITHFEP----SISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEE-AFRLYE 75 (89)
T ss_dssp CEEEEEECT----TCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHHH-HHHHHH
T ss_pred eEEEEECCC----CCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHHH-HHHHHH
Confidence 788888887 468999999999999986433 455555555444 444433
No 15
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=41.63 E-value=35 Score=23.71 Aligned_cols=50 Identities=10% Similarity=0.065 Sum_probs=38.6
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceee-c-CcHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITI-P-CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~I-P-C~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|++++...-.| ....|.| + .+.+.|+.++..|=.+.
T Consensus 39 ~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 39 EQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSR 92 (127)
T ss_dssp EEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred EEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCC
Confidence 5777777777 689999999865444 4578999 4 68999999998876553
No 16
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=40.12 E-value=19 Score=24.83 Aligned_cols=22 Identities=14% Similarity=0.365 Sum_probs=17.9
Q ss_pred cCchHHHHHHHhhHHhcCccCC
Q 036854 111 FNHPLFGELLKQAERVYGFNHP 132 (167)
Q Consensus 111 LnhPlF~eLL~~AeEEfGf~~~ 132 (167)
+..=.+-+|+..-|++||..-+
T Consensus 35 lDSL~~veLi~~lE~~fgi~i~ 56 (101)
T 2kw2_A 35 IDSLDFLDIAFAIDKAFGIKLP 56 (101)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHCCccC
Confidence 4566789999999999998654
No 17
>2bzb_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative, regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=39.82 E-value=5.2 Score=26.85 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=19.6
Q ss_pred HHHHhhHHhcCccCCCceeecCcHHHHHHHHHHH
Q 036854 118 ELLKQAERVYGFNHPGGITIPCRISEFEKVKTRI 151 (167)
Q Consensus 118 eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i 151 (167)
+|.+.+ ++|||.++-+|.++.+.+........+
T Consensus 16 eL~~l~-~k~Gl~~~~vI~~SQeLD~LIn~Y~k~ 48 (62)
T 2bzb_A 16 ELIQLV-ARHGLDHDKVLLFSRDLDKLINKFMNV 48 (62)
T ss_dssp HHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 444444 489998866666666665554443333
No 18
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=39.80 E-value=8.7 Score=27.19 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=19.1
Q ss_pred HHHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 036854 117 GELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDAWDHCRSRKHHR 164 (167)
Q Consensus 117 ~eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~~ 164 (167)
++|+.+++|+|-.. .-++ -+.+-..+..+......++++|||
T Consensus 46 k~Lc~Ls~edF~~~-----~p~~-GdiL~~hL~~l~~~~~~~~~~~~~ 87 (89)
T 1ji7_A 46 KALLLLTKEDFRYR-----SPHS-GDELYELLQHILKQRDHHHHHHHR 87 (89)
T ss_dssp HHHTTCCHHHHHHH-----CTTT-HHHHHHHHHHHHHC----------
T ss_pred HHHHcCCHHHHHhH-----cCCc-hHHHHHHHHHHHhCcccccccccc
Confidence 79999999997321 1235 344444555555554444555665
No 19
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=39.14 E-value=54 Score=22.87 Aligned_cols=46 Identities=9% Similarity=0.177 Sum_probs=35.5
Q ss_pred eeEEEeeeccC--chHHHHHHHhhHHhcCccCCCceeec--CcHHHHHHHHHHHhcC
Q 036854 102 RRVFVPVIYFN--HPLFGELLKQAERVYGFNHPGGITIP--CRISEFEKVKTRIDAW 154 (167)
Q Consensus 102 rRfvVP~~yLn--hPlF~eLL~~AeEEfGf~~~G~L~IP--C~~~~Fe~vl~~i~~~ 154 (167)
+.|-+.-..|. .|.|++++... ....|.|| .+.+.|+.++..+=.+
T Consensus 43 ~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 43 HAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp EEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 56777666664 69999998775 45789996 8999999999877544
No 20
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=36.62 E-value=29 Score=25.58 Aligned_cols=64 Identities=16% Similarity=0.071 Sum_probs=44.4
Q ss_pred CCCCeEEEEEcccCCCceeEEEeeeccC-chHHHHHHHhhHHhcCc-cCCCceeecCcHHHHHHHHHHHhcCC
Q 036854 85 VPKGHLAVYVGESDDEARRVFVPVIYFN-HPLFGELLKQAERVYGF-NHPGGITIPCRISEFEKVKTRIDAWD 155 (167)
Q Consensus 85 vpkG~~aVYVG~~~~~~rRfvVP~~yLn-hPlF~eLL~~AeEEfGf-~~~G~L~IPC~~~~Fe~vl~~i~~~~ 155 (167)
.....+.+-|| ..+|.+..+-|. .|- .+|..++...-+ +.+|.+-|..|...|++||..+..+.
T Consensus 10 ~~~~~V~LNVG-----G~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~ 75 (124)
T 1s1g_A 10 RQDELIVLNVS-----GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 75 (124)
T ss_dssp --CCEEEEEET-----TEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEeC-----CEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCC
Confidence 34567888898 489999987764 231 233334433223 35699999999999999999998864
No 21
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=36.16 E-value=15 Score=26.91 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=12.6
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 140 RISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 140 ~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
+...++.++..+.+.+..++||||
T Consensus 152 ~~~~~~~~l~~l~~~~~~~~~~~~ 175 (175)
T 1xvq_A 152 QEPNYEAALAALGATSGSHHHHHH 175 (175)
T ss_dssp CCCCHHHHHHHHHHTC--------
T ss_pred CCCCHHHHHHHHHhhcCcccccCC
Confidence 445788899989888776666665
No 22
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=33.16 E-value=51 Score=26.73 Aligned_cols=50 Identities=18% Similarity=0.245 Sum_probs=25.0
Q ss_pred hHHHHHHHhh------HHhcCccCCCceeec--CcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 114 PLFGELLKQA------ERVYGFNHPGGITIP--CRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 114 PlF~eLL~~A------eEEfGf~~~G~L~IP--C~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
.++..|+++. ...|+-..++.|.|. ++.+.++.++..|+..-...+||||
T Consensus 341 ~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~~~ 398 (400)
T 3asa_A 341 DLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQSHHHH 398 (400)
T ss_dssp THHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhhhhccc
Confidence 3455566542 123432234667765 6888999999999877555544443
No 23
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=33.05 E-value=44 Score=27.40 Aligned_cols=47 Identities=13% Similarity=0.170 Sum_probs=29.7
Q ss_pred HHHHHHHhh------HHhcCccCCCc--eeecCcHHHHHHHHHHHhcCCCCCCCC
Q 036854 115 LFGELLKQA------ERVYGFNHPGG--ITIPCRISEFEKVKTRIDAWDHCRSRK 161 (167)
Q Consensus 115 lF~eLL~~A------eEEfGf~~~G~--L~IPC~~~~Fe~vl~~i~~~~~~~~~~ 161 (167)
++..|+++. ...||-..++. |++.|+.+..+..+..|+.+.+.++++
T Consensus 377 ~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~~~~~~ 431 (432)
T 3ei9_A 377 VFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHHHHH 431 (432)
T ss_dssp HHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhhhcccC
Confidence 455555542 12344333455 455689999999999999887655443
No 24
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=32.98 E-value=78 Score=21.53 Aligned_cols=51 Identities=10% Similarity=0.032 Sum_probs=35.9
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeec-CcHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIP-CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IP-C~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|++++...-.| .....|.|+ .+.+.|+.++..+=.+.
T Consensus 35 ~~~~aHk~vLaa~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 35 REFPTHRSVLAACSQYFKKLFTSGAVV---DQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred EEEeHHHHHHHHhCHHHHHHhcCCccc---cCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 6777777777 489999999754333 234678898 58999999998876553
No 25
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=32.74 E-value=25 Score=28.17 Aligned_cols=31 Identities=32% Similarity=0.511 Sum_probs=19.4
Q ss_pred CceeecCc----HHHHHHHHHHHhcCCCCCCCCCC
Q 036854 133 GGITIPCR----ISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 133 G~L~IPC~----~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
+.|.|||. .++.++++..++..-.-++||||
T Consensus 339 ~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~~~~~ 373 (373)
T 3frk_A 339 EILSIPIWYGMKNEEIEYVIDKINAWKLEHHHHHH 373 (373)
T ss_dssp HEEEECCCTTCCHHHHHHHHHHHHTCC--------
T ss_pred CEEEccCCCCCCHHHHHHHHHHHHHHhhhhcccCC
Confidence 67999994 67899999999888666666665
No 26
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=31.08 E-value=37 Score=25.59 Aligned_cols=64 Identities=16% Similarity=0.071 Sum_probs=45.9
Q ss_pred CCCCeEEEEEcccCCCceeEEEeeeccC-chHHHHHHHhhHHhcCc-cCCCceeecCcHHHHHHHHHHHhcCC
Q 036854 85 VPKGHLAVYVGESDDEARRVFVPVIYFN-HPLFGELLKQAERVYGF-NHPGGITIPCRISEFEKVKTRIDAWD 155 (167)
Q Consensus 85 vpkG~~aVYVG~~~~~~rRfvVP~~yLn-hPlF~eLL~~AeEEfGf-~~~G~L~IPC~~~~Fe~vl~~i~~~~ 155 (167)
.....+.+-|| ..+|.+..+-|. +|- .+|..++...-+ +.+|.+-|-.|...|++||..+..+.
T Consensus 32 ~~~~~V~LNVG-----G~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~ 97 (140)
T 2nz0_B 32 RQDELIVLNVS-----GRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 97 (140)
T ss_dssp TCCCEEEEEET-----TEEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEEEC-----CEEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCC
Confidence 45678888998 489999887663 331 233334433333 45699999999999999999998864
No 27
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=29.64 E-value=18 Score=26.67 Aligned_cols=24 Identities=8% Similarity=0.213 Sum_probs=13.3
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 140 RISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 140 ~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
+...+..++.++++....++||||
T Consensus 166 ~l~~l~~~l~l~~~~~~~~~~~~~ 189 (189)
T 3ib6_A 166 DLADVPEALLLLKKISEGHHHHHH 189 (189)
T ss_dssp SGGGHHHHHHHHHHHC--------
T ss_pred cHHhHHHHHHHHHHhhccccccCC
Confidence 566778899999999888887776
No 28
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=28.71 E-value=22 Score=22.08 Aligned_cols=20 Identities=35% Similarity=0.569 Sum_probs=15.4
Q ss_pred eccCchHHHHHHHh----hHHhcC
Q 036854 109 IYFNHPLFGELLKQ----AERVYG 128 (167)
Q Consensus 109 ~yLnhPlF~eLL~~----AeEEfG 128 (167)
..|+.|-|+.||.- |.++||
T Consensus 26 ~lL~~PHfqaLl~ahD~Va~~~y~ 49 (50)
T 1y74_B 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhc
Confidence 56899999999974 556664
No 29
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=28.11 E-value=8.3 Score=27.94 Aligned_cols=13 Identities=54% Similarity=1.009 Sum_probs=10.1
Q ss_pred eccCchHHHHHHH
Q 036854 109 IYFNHPLFGELLK 121 (167)
Q Consensus 109 ~yLnhPlF~eLL~ 121 (167)
.|||||.|.-|..
T Consensus 5 ~YLNHPtFGlLy~ 17 (89)
T 2xko_C 5 NYLNHPTFGLLYQ 17 (89)
T ss_dssp CEEEETTTEEEEE
T ss_pred ccccCCccchhhe
Confidence 4999999976644
No 30
>2nuh_A Periplasmic divalent cation tolerance protein; CUTA, unknown function; 1.39A {Xylella fastidiosa}
Probab=27.23 E-value=51 Score=24.43 Aligned_cols=44 Identities=11% Similarity=0.069 Sum_probs=33.6
Q ss_pred CchHHHHHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhcCC
Q 036854 112 NHPLFGELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDAWD 155 (167)
Q Consensus 112 nhPlF~eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~~~ 155 (167)
....|.+|.+.-.+.--|+-+-.|.+|.+...=+++-|..+...
T Consensus 63 ~~~~~~~l~~~I~~~HpYevPeIi~lpi~~g~~~Yl~Wi~~~t~ 106 (118)
T 2nuh_A 63 NAVHVNAAITRLCALHPYRLPEAIAVQVSVGLPEYLTWINTEID 106 (118)
T ss_dssp EGGGHHHHHHHHHHHCSSSSCCCEEEECCCCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHCCCcCCEEEEEEccCCCHHHHHHHHHHcC
Confidence 35678899999999988988889999998665566666655543
No 31
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=27.16 E-value=1.5e+02 Score=21.06 Aligned_cols=51 Identities=10% Similarity=0.090 Sum_probs=37.4
Q ss_pred CceeEEEeeeccCchHHHHHHHhhHHhcCccC---------CCceeecCcHHHHHHHHHHHhc
Q 036854 100 EARRVFVPVIYFNHPLFGELLKQAERVYGFNH---------PGGITIPCRISEFEKVKTRIDA 153 (167)
Q Consensus 100 ~~rRfvVP~~yLnhPlF~eLL~~AeEEfGf~~---------~G~L~IPC~~~~Fe~vl~~i~~ 153 (167)
+.+||.| +++.+|.|.+|-.+-..-||++. +..|+|.=+++. +.++....+
T Consensus 16 e~~rf~v--s~~~~~tweel~~mvk~~f~L~~~~ikY~DEenD~v~i~Sq~E~-eEAlkva~k 75 (87)
T 2bkf_A 16 EIQSFLV--SDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEY-EEALKMAVK 75 (87)
T ss_dssp EEEEEEE--SCGGGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHH-HHHHHHHHH
T ss_pred CeeEEEe--ccCCCCCHHHHHHHHHHHcCCCceEEEEEcCCCCEEEEecHHHH-HHHHHHhcc
Confidence 5788865 68899999999999999999642 356788776554 456554443
No 32
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=26.78 E-value=16 Score=24.94 Aligned_cols=20 Identities=5% Similarity=0.134 Sum_probs=18.4
Q ss_pred eccCchHHHHHHHhhHHhcC
Q 036854 109 IYFNHPLFGELLKQAERVYG 128 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeEEfG 128 (167)
.||+...|++++.|+.+||-
T Consensus 31 ~yLsdedF~~vFgms~~eF~ 50 (67)
T 1yu8_X 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 79999999999999999973
No 33
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.80 E-value=66 Score=26.51 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=25.2
Q ss_pred HHHhhHHhcCccCCCceeec---CcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 119 LLKQAERVYGFNHPGGITIP---CRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 119 LL~~AeEEfGf~~~G~L~IP---C~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
.++.+-+..|+.. |++..| .+.+.-+.+...++....+++||||
T Consensus 254 ~~K~al~~~G~~~-g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~~~~~~ 300 (300)
T 3eb2_A 254 CIKAGLALQGYDV-GDPIPPQAALTAEERKAVEKVLAEIAEGHHHHHH 300 (300)
T ss_dssp HHHHHHHHTTCCC-CCCCTTSCCCCHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHCCCCC-CCcCCCCCCCCHHHHHHHHHHHHHHhhcccccCC
Confidence 3455555677754 666654 6888889999999998888888777
No 34
>3r4d_B Spike glycoprotein; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Murine hepatitis virus}
Probab=25.11 E-value=15 Score=31.06 Aligned_cols=57 Identities=25% Similarity=0.441 Sum_probs=18.8
Q ss_pred CCCCCeEEEEEcccCCCceeEEEeeeccC------------chHHHHHHHhhHHhcCccCCCcee--ecCcHHHHHHH
Q 036854 84 EVPKGHLAVYVGESDDEARRVFVPVIYFN------------HPLFGELLKQAERVYGFNHPGGIT--IPCRISEFEKV 147 (167)
Q Consensus 84 ~vpkG~~aVYVG~~~~~~rRfvVP~~yLn------------hPlF~eLL~~AeEEfGf~~~G~L~--IPC~~~~Fe~v 147 (167)
.+-+=.|.+|.|.- -..=|++|..+-- .|+-. -.=-+.|+|+|.|+ +.|..+.+.++
T Consensus 208 ~~TtFLFs~ylG~v--Ls~yyVlP~~C~~~~~~~~s~qYWVTPL~~-----RQyL~~Fnq~GvIt~AVDCaSs~~SEI 278 (288)
T 3r4d_B 208 SATTFLFSVYIGDI--LTQYYVLPFICNPTAGSTFAPRYWVTPLVK-----RQYLFNFNQKGVITSAVDCASSYTSEI 278 (288)
T ss_dssp TCCEEEEEEECSSC--CCEEEECCEECCCCSSCCCCCCEEEEECBC-----CBC------------------------
T ss_pred cceeeeeehhhhhh--hheeEEEEEeecCCccccccchheeecccc-----eeeeeeecCCceEEechhhhhhhhhhe
Confidence 35566788898841 2466888876652 12210 01124688999998 67887766544
No 35
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=24.95 E-value=71 Score=21.97 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=34.8
Q ss_pred eeEEEeeeccC--chHHHHHHHhhHHhcCccCCCceeec--CcHHHHHHHHHHHhcC
Q 036854 102 RRVFVPVIYFN--HPLFGELLKQAERVYGFNHPGGITIP--CRISEFEKVKTRIDAW 154 (167)
Q Consensus 102 rRfvVP~~yLn--hPlF~eLL~~AeEEfGf~~~G~L~IP--C~~~~Fe~vl~~i~~~ 154 (167)
+.|-+.-..|. .|.|++++.....| +..|.|| .+...|+.++..|=.+
T Consensus 42 ~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 42 KEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp EEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred EEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 56776666664 68999998764332 5678887 7999999999877543
No 36
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=24.94 E-value=19 Score=25.76 Aligned_cols=20 Identities=5% Similarity=0.062 Sum_probs=18.6
Q ss_pred eccCchHHHHHHHhhHHhcC
Q 036854 109 IYFNHPLFGELLKQAERVYG 128 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeEEfG 128 (167)
.||+...|++++.|+.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T 1ujs_A 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999984
No 37
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=24.16 E-value=14 Score=25.16 Aligned_cols=19 Identities=5% Similarity=0.132 Sum_probs=18.0
Q ss_pred eccCchHHHHHHHhhHHhc
Q 036854 109 IYFNHPLFGELLKQAERVY 127 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeEEf 127 (167)
.||+...|++++.|+.+||
T Consensus 32 ~yLsdedF~~vFgmsr~eF 50 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999997
No 38
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=24.10 E-value=1.1e+02 Score=20.94 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=35.1
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeec-CcHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIP-CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IP-C~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|++++.... +..|.|| .+.+.|+.++..+=.+.
T Consensus 34 ~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~~~~f~~ll~~iYtg~ 83 (119)
T 3b84_A 34 LVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPAGFAEIFGLLLDFFYTGH 83 (119)
T ss_dssp EEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECGGGHHHHHHHHHHHHHSC
T ss_pred EEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCCCCHHHHHHHHHHHcCCC
Confidence 5677776666 4799999886531 5689998 57889999998876553
No 39
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=23.46 E-value=25 Score=25.63 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=24.8
Q ss_pred cCchHHHHHHHhhHHhcCccCCCceeecCcHHHHHHHHHHHhcCCCC---CCCCCCCCC
Q 036854 111 FNHPLFGELLKQAERVYGFNHPGGITIPCRISEFEKVKTRIDAWDHC---RSRKHHRPH 166 (167)
Q Consensus 111 LnhPlF~eLL~~AeEEfGf~~~G~L~IPC~~~~Fe~vl~~i~~~~~~---~~~~~~~~~ 166 (167)
++...+.++++..-+++.-+.+|.|+ ..+|..++.....++.+ ...++|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~D~d~dG~Is----~~EF~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (202)
T 2bec_A 148 VTEEQLENIADRTVQEADEDGDGAVS----FVEFTKSLEKMDVEQKMSIRILKHHHHHH 202 (202)
T ss_dssp CCHHHHHHHHHHHHHHHCSSCSSSEE----HHHHHHTTTTSCHHHHTSCTTTC------
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcCc----HHHHHHHHHHhCccceEEEeecCCccCCC
Confidence 44455566666655567777888876 35565554332222222 245555554
No 40
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=23.20 E-value=1.6e+02 Score=21.56 Aligned_cols=56 Identities=9% Similarity=0.151 Sum_probs=40.3
Q ss_pred EEEEcccCCCceeEEEeeeccCchHHHHHHHhhHHhcCccC---------CCceeecCcHHHHHHHHHHHhc
Q 036854 91 AVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNH---------PGGITIPCRISEFEKVKTRIDA 153 (167)
Q Consensus 91 aVYVG~~~~~~rRfvVP~~yLnhPlF~eLL~~AeEEfGf~~---------~G~L~IPC~~~~Fe~vl~~i~~ 153 (167)
+.|.| +.+||.| +++.++-|.+|-.+-..-||++. +..|+|.=+.+ ||.++....+
T Consensus 19 V~f~g----e~~rF~V--s~~~~~tweel~~mvk~~f~L~~~~IkY~DEenD~V~i~Sq~E-~eEAlkva~k 83 (101)
T 1wj6_A 19 VTFKN----EIQSFLV--SDPENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGE-YEEALKMAVK 83 (101)
T ss_dssp EEETT----EEEEEEE--SCTTTSCHHHHHHHHHHHHCCSSBCCEEECTTSCEECCCSHHH-HHHHHHHHHH
T ss_pred EEEcC----CeeEEEe--cCCCCCCHHHHHHHHHHHcCCCceEEEEecCCCCEEEEecHHH-HHHHHHHhcc
Confidence 34556 6788865 68999999999999999999642 35677777655 4556665444
No 41
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=23.06 E-value=86 Score=26.20 Aligned_cols=55 Identities=15% Similarity=0.238 Sum_probs=36.1
Q ss_pred eEEEeeeccCchHHHHHHHhhHHhcCcc---CCCceeecCcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 103 RVFVPVIYFNHPLFGELLKQAERVYGFN---HPGGITIPCRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 103 RfvVP~~yLnhPlF~eLL~~AeEEfGf~---~~G~L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
++.|.+.--+ +-.+++++. ||.. .-.+.+|+ +.++|+..+..+.+----++||||
T Consensus 263 ~~~~s~RS~~-~~v~~i~~~----~gGGGH~~AAg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 320 (320)
T 3dev_A 263 QIRCRIRSKG-ITINDVANQ----FGGGGHPNASGVSVY-SWDEFEELAQALRQKLLEHHHHHH 320 (320)
T ss_dssp SEEEEEEESS-SCCHHHHHH----TTCEEETTEEEEEES-SHHHHHHHHHHHHHHTTSCC----
T ss_pred EEEEEEecCC-cCHHHHHHH----cCCCCcHHhceeecC-CHHHHHHHHHHHHHHHHhhhccCC
Confidence 6777777766 777777653 6532 22568899 999999998888776555555554
No 42
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.09 E-value=99 Score=23.66 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=27.5
Q ss_pred HHhhHHhcCccCCCc--eeecCcHHHHHHHHHHHhcCCCCCCCCCC
Q 036854 120 LKQAERVYGFNHPGG--ITIPCRISEFEKVKTRIDAWDHCRSRKHH 163 (167)
Q Consensus 120 L~~AeEEfGf~~~G~--L~IPC~~~~Fe~vl~~i~~~~~~~~~~~~ 163 (167)
-+.|.+||- .||. -|++=...+.|.+-....+-.+-.+||||
T Consensus 118 rkeaqqefr--sdgvdvrtvsdkeelieqvrrfvrkvgslehhhhh 161 (162)
T 2l82_A 118 RKEAQQEFR--SDGVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHH 161 (162)
T ss_dssp HHHHHHHHC--CSSCEEEEESSHHHHHHHHHHHHHHHTTSCCTTCC
T ss_pred HHHHHHHhh--hcCceeeecCCHHHHHHHHHHHHHHhccccccccC
Confidence 356778865 5554 56777778888887777765554444444
No 43
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=21.83 E-value=18 Score=24.62 Aligned_cols=20 Identities=25% Similarity=0.364 Sum_probs=18.6
Q ss_pred eccCchHHHHHHHhhHHhcC
Q 036854 109 IYFNHPLFGELLKQAERVYG 128 (167)
Q Consensus 109 ~yLnhPlF~eLL~~AeEEfG 128 (167)
.||+...|++++.|+.+||-
T Consensus 31 ~yLsdedF~~vFgmsr~eF~ 50 (67)
T 2k6m_S 31 IYLTDEDFEFALDMTRDEYN 50 (67)
T ss_dssp GGSCHHHHHHHTSSCHHHHT
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 79999999999999999984
No 44
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=21.33 E-value=1.2e+02 Score=24.34 Aligned_cols=64 Identities=13% Similarity=0.090 Sum_probs=46.1
Q ss_pred CCCeEEEEEcccCCCceeEEEeeeccCc-h--HHHHHHHhhHHhcC--ccCCCceeecCcHHHHHHHHHHHhcCC
Q 036854 86 PKGHLAVYVGESDDEARRVFVPVIYFNH-P--LFGELLKQAERVYG--FNHPGGITIPCRISEFEKVKTRIDAWD 155 (167)
Q Consensus 86 pkG~~aVYVG~~~~~~rRfvVP~~yLnh-P--lF~eLL~~AeEEfG--f~~~G~L~IPC~~~~Fe~vl~~i~~~~ 155 (167)
....+.+-|| ..+|.+..+-|.. | .|..|+... .++. .+.+|.+-|..|...|++||..+..+.
T Consensus 10 ~~~~V~LNVG-----G~~F~Tt~sTL~r~PdS~L~~lfs~~-~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~ 78 (202)
T 3drx_A 10 VSKWVRLNVG-----GTYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 78 (202)
T ss_dssp CCCEEEEEET-----TEEEEEETTGGGSCTTSSTHHHHSCC-CC----BCTTCCEEECSCSTTHHHHHHHHHHSC
T ss_pred CCCEEEEEEC-----CEEEEEeHHHHhCCCcchHHHHhcCc-cccCcccCCCccEEecCChHHHHHHHHHhcCCc
Confidence 4567788898 4899999887753 4 566664321 1232 345699999999999999999998763
No 45
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=20.74 E-value=1.3e+02 Score=21.36 Aligned_cols=51 Identities=10% Similarity=0.162 Sum_probs=37.2
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeec-CcHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIP-CRISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IP-C~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|+.++...-.| ..+..|.|| .+.+.|+.++..+=.+.
T Consensus 44 ~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~~l~~~Yt~~ 97 (172)
T 3htm_A 44 QEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPEVFKEMMCFIYTGK 97 (172)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHSCCCG---GGTTEEEECSSCHHHHHHHHHHHHHSC
T ss_pred EEEEeeHHHHHHcCHHHHHHHccCccc---cCCCeEEecCCCHHHHHHHHHHHhCCC
Confidence 5688877777 479999999853222 234688887 58999999998876553
No 46
>4h14_A Spike glycoprotein; beta-sandwich, sugar binding, viral protein; HET: NAG; 1.55A {Bovine coronavirus}
Probab=20.72 E-value=53 Score=28.24 Aligned_cols=23 Identities=26% Similarity=0.538 Sum_probs=18.6
Q ss_pred cCccCCCcee--ecCcHHHHHHHHH
Q 036854 127 YGFNHPGGIT--IPCRISEFEKVKT 149 (167)
Q Consensus 127 fGf~~~G~L~--IPC~~~~Fe~vl~ 149 (167)
+-|+++|.|+ +.|..+.+.++.+
T Consensus 258 l~fd~nG~It~AVDCs~d~~sELkC 282 (290)
T 4h14_A 258 LAFNQDGVIFNAVDCKSDFMSEIKC 282 (290)
T ss_dssp EEECTTSCEEEEEETTSSHHHHHHH
T ss_pred EEecCCCcEEEeEecCCCccceeeE
Confidence 4688999998 8899998877743
No 47
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=20.46 E-value=49 Score=26.42 Aligned_cols=30 Identities=23% Similarity=0.300 Sum_probs=18.3
Q ss_pred CceeecC----cHHHHHHHHHHHhcCCCCCCCCC
Q 036854 133 GGITIPC----RISEFEKVKTRIDAWDHCRSRKH 162 (167)
Q Consensus 133 G~L~IPC----~~~~Fe~vl~~i~~~~~~~~~~~ 162 (167)
+.|.||+ +.++.++++..|+..-...+|||
T Consensus 357 ~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~~~~ 390 (393)
T 1mdo_A 357 RICSLPLFPDMTESDFDRVITALHQIAGQGSHHH 390 (393)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHC------
T ss_pred CEEEecCCCCCCHHHHHHHHHHHHHHHhcCCccc
Confidence 3689998 47888888888876544443333
No 48
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=20.13 E-value=1.4e+02 Score=20.37 Aligned_cols=46 Identities=7% Similarity=-0.010 Sum_probs=34.9
Q ss_pred eeEEEeeecc--CchHHHHHHHhhHHhcCccCCCceeecC-cHHHHHHHHHHHhcCC
Q 036854 102 RRVFVPVIYF--NHPLFGELLKQAERVYGFNHPGGITIPC-RISEFEKVKTRIDAWD 155 (167)
Q Consensus 102 rRfvVP~~yL--nhPlF~eLL~~AeEEfGf~~~G~L~IPC-~~~~Fe~vl~~i~~~~ 155 (167)
+.|-+.-..| ..|.|++++.. ++..|.|+- +.+.|+.++..+=.+.
T Consensus 37 ~~~~aHk~vLaa~S~yF~~~f~~--------~~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 37 VHFKAHKAVLAACSEYFKMLFVD--------QKDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHH--------CCSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred EEEehhHHHHHHcCHHHHHHHcC--------CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 6777777777 48999999975 245677775 7889999998876553
Done!