BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036856
         (68 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q09751|LGUL_SCHPO Lactoylglutathione lyase OS=Schizosaccharomyces pombe (strain 972 /
           ATCC 24843) GN=glo1 PE=1 SV=1
          Length = 302

 Score = 31.2 bits (69), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 26  GCFLLVEKGIQTFQRSLPDGKVKQV-FFFDPDGNGLEVASRRD 67
            C  L  KG+ +F++ L DGK+K + F  DPD   +E+ S+ +
Sbjct: 114 ACAYLESKGV-SFKKKLSDGKMKHIAFALDPDNYWIELVSQSE 155


>sp|Q6FTE0|YKR18_CANGA Mitochondrial outer membrane protein CAGL0G03245g OS=Candida
           glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
           0622 / NRRL Y-65) GN=CAGL0G03245g PE=3 SV=1
          Length = 751

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 26  GCFLLVEKGIQTFQRSLPDGKVKQV 50
           GC LL +K + TF + LPDGKV+ V
Sbjct: 658 GCDLLDQKVLPTFFKELPDGKVEYV 682


>sp|P17296|MPC2_CUPNE Metapyrocatechase 2 OS=Cupriavidus necator GN=mcpII PE=3 SV=1
          Length = 320

 Score = 30.0 bits (66), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)

Query: 12  FGMSEAESLQFLSFGCFLLVEKGIQ--------TFQRSLPDGKVKQVFFFDPDGNGLEV 62
           F   E + L +LSF CF     GI+        T       G    V+FFDPDGN ++V
Sbjct: 70  FYEGERKRLAYLSFSCFEGDFAGIRQQLAASGATLVEDPRYGDESGVWFFDPDGNLVQV 128


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.142    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,650,745
Number of Sequences: 539616
Number of extensions: 702495
Number of successful extensions: 1949
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1947
Number of HSP's gapped (non-prelim): 3
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)