BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036858
MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA
EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK
LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN

High Scoring Gene Products

Symbol, full name Information P value
MLP423
MLP-like protein 423 		protein from Arabidopsis thaliana 1.3e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036858
        (160 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2199932 - symbol:MLP423 "MLP-like protein 423"...   158  1.3e-11   1


>TAIR|locus:2199932 [details] [associations]
            symbol:MLP423 "MLP-like protein 423" species:3702
            "Arabidopsis thaliana" [GO:0006952 "defense response" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016020 "membrane"
            evidence=IDA] [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR000916 Pfam:PF00407 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0016020 GO:GO:0009607
            Gene3D:3.30.530.20 InterPro:IPR023393 EMBL:AC002423
            HOGENOM:HOG000239987 InterPro:IPR024948 SMART:SM01037 EMBL:AJ306136
            EMBL:AY052277 EMBL:AY061912 EMBL:AY088360 IPI:IPI00542532
            RefSeq:NP_001185075.1 RefSeq:NP_173813.1 UniGene:At.25399
            UniGene:At.51746 UniGene:At.74164 ProteinModelPortal:Q93VR4
            SMR:Q93VR4 STRING:Q93VR4 PaxDb:Q93VR4 PRIDE:Q93VR4 ProMEX:Q93VR4
            EnsemblPlants:AT1G24020.1 EnsemblPlants:AT1G24020.2 GeneID:839014
            KEGG:ath:AT1G24020 TAIR:At1g24020 eggNOG:NOG277848
            InParanoid:Q93VR4 OMA:TYGEGSP PhylomeDB:Q93VR4
            ProtClustDB:CLSN2682365 Genevestigator:Q93VR4 GermOnline:AT1G24020
            InterPro:IPR024949 PRINTS:PR00634 Uniprot:Q93VR4
        Length = 155

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 51/143 (35%), Positives = 69/143 (48%)

Query:    16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGA-GSIKKITFAEGGQVNDVK-HKIE 73
             PA  F   + +   LFPK FP+  K I V+ GDG A GSI+ IT+ EG  +  +   +IE
Sbjct:    16 PAEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITYGEGSPLVKISAERIE 75

Query:    74 EVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYTKGELEVTEEQ 133
              VD  N   SYSII G +L  +  K       V   DGGS+ K        GE E T  +
Sbjct:    76 AVDLENKSMSYSIIGGEML--EYYKTFKGTITVIPKDGGSLLKW------SGEFEKTAHE 127

Query:   134 FNAG---KEKSAAMVKALEAYLL 153
              +     K+ +    K ++ YLL
Sbjct:   128 IDDPHVIKDFAVKNFKEIDEYLL 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.134   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       160   0.00097  106 3  11 23  0.43    32
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  582 (62 KB)
  Total size of DFA:  137 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.99u 0.15s 16.14t   Elapsed:  00:00:00
  Total cpu time:  15.99u 0.15s 16.14t   Elapsed:  00:00:00
  Start:  Fri May 10 09:14:31 2013   End:  Fri May 10 09:14:31 2013

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