BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036858
(160 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E09|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Length = 159
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 110/159 (69%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV T+ES T +PP R+FKA VL++D L PKI P AIK+ +++EGDGG G+IKKITF E
Sbjct: 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G Q VKHKI+ +DK N SY++IEG L D LEKISY+ + V SP GGSI K+
Sbjct: 61 GSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG +E+ EE AGKEK++ + K +E YL +PD N
Sbjct: 121 HTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAYN 159
>pdb|1H2O|A Chain A, Solution Structure Of The Major Cherry Allergen Pru Av 1
Mutant E45w
Length = 159
Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 109/159 (68%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV T+ES T +PP R+FKA VL++D L PKI P AIK+ +++ GDGG G+IKKITF E
Sbjct: 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILWGDGGPGTIKKITFGE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G Q VKHKI+ +DK N SY++IEG L D LEKISY+ + V SP GGSI K+
Sbjct: 61 GSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG +E+ EE AGKEK++ + K +E YL +PD N
Sbjct: 121 HTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDAYN 159
>pdb|2LPX|A Chain A, Solution Structure Of Strawberry Allergen Fra A 1e
Length = 170
Score = 166 bits (420), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 109/160 (68%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
MGV T+E+ T +P ++FKA VL++D L PKI P A+K +++EGDGG G+IKKITF
Sbjct: 1 MGVYTYENEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFG 60
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK 120
EG VKHKI +DKVN SYS+IEG L++ +EKI Y+ + V +P GG+I KT K
Sbjct: 61 EGSHYGYVKHKIHSIDKVNHTYSYSLIEGDALSENIEKIDYETKLVSAPHGGTIIKTTSK 120
Query: 121 LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG++E+ EE AGKEK+A + K +E YL +P N
Sbjct: 121 YHTKGDVEIKEEHVKAGKEKAAHLFKLIEGYLKDHPSEYN 160
>pdb|4A80|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
pdb|4A81|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With 8-Anilinonaphthalene-1-Sulfonate
( Ans) And Deoxycholic Acid
pdb|4A83|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Deoxycholate.
pdb|4A85|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Kinetin.
pdb|4A86|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Ternary Complex With Kinetin And
8-Anilinonaphthalene-1- Sulfonate (Ans)
pdb|4A87|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Naringenin.
pdb|4A88|A Chain A, Crystal Structure Of Native Major Birch Pollen Allergen
Bet V 1 Isoform A
pdb|4A8G|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
In Complex With Dimethylbenzylammonium Propane Sulfonate
Length = 159
Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 107/159 (67%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFPK+ P AI +++ +EG+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1FSK|A Chain A, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|D Chain D, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|G Chain G, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1FSK|J Chain J, Complex Formation Between A Fab Fragment Of A Monoclonal
Igg Antibody And The Major Allergen From Birch Pollen
Bet V 1
pdb|1BV1|A Chain A, Birch Pollen Allergen Bet V 1
pdb|1BTV|A Chain A, Structure Of Bet V 1, Nmr, 20 Structures
Length = 159
Score = 155 bits (393), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 107/159 (67%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFPK+ P AI +++ +EG+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1B6F|A Chain A, Birch Pollen Allergen Bet V 1
Length = 159
Score = 155 bits (393), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 107/159 (67%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFPK+ P AI +++ +EG+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKELGETLLRAVESYLLAHSDAYN 159
>pdb|4A8U|A Chain A, Crystal Structure Of Native Birch Pollen Allergen Bet V 1
Isoform J
pdb|4A8V|A Chain A, Crystal Structure Of Birch Pollen Allergen Bet V 1 Isoform
J In Complex With 8-Anilinonaphthalene-1-Sulfonate (Ans)
Length = 159
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 107/159 (67%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFPK+ P AI +++ +EG+GG G+IKKI+F E
Sbjct: 1 GVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K SYS+IEG + D LEKIS + + V +P+GGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1LLT|A Chain A, Birch Pollen Allergen Bet V 1 Mutant E45s
Length = 159
Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 106/159 (66%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFPK+ P AI +++ + G+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENISGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|4A84|A Chain A, Crystal Structure Of Major Birch Pollen Allergen Bet V 1 A
F30v Mutant In Complex With Deoxycholate
Length = 159
Score = 153 bits (386), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 106/159 (66%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D L PK+ P AI +++ +EG+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGGSI K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1FM4|A Chain A, Crystal Structure Of The Birch Pollen Allergen Bet V 1l
Length = 159
Score = 150 bits (378), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P ARMFKA +L+ D+L PK+ P AI +++ +EG+GG G+IKKI F E
Sbjct: 1 GVFNYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V +PDGG + K K
Sbjct: 61 GFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPDGGCVLKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|1QMR|A Chain A, Birch Pollen Allergen Bet V 1 Mutant N28t, K32q, E45s,
P108g
Length = 159
Score = 148 bits (374), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 105/159 (66%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV +E+ T +P AR+FKA +L+ D LFP++ P AI +++ + G+GG G+IKKI+F E
Sbjct: 1 GVFNYETETTSVIPAARLFKAFILDGDTLFPQVAPQAISSVENISGNGGPGTIKKISFPE 60
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G VK +++EVD N K +YS+IEG + D LEKIS + + V + DGGSI K K
Sbjct: 61 GLPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATGDGGSILKISNKY 120
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
+TKG+ EV EQ A KE +++A+E+YLLA+ D N
Sbjct: 121 HTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAYN 159
>pdb|2K7H|A Chain A, Nmr Solution Structure Of Soybean Allergen Gly M 4
Length = 157
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV TFE V PA ++KALV ++D + PK D+ K+++ VEG+GG G+IKKITF E
Sbjct: 1 GVFTFEDEINSPVAPATLYKALVTDADNVIPKAL-DSFKSVENVEGNGGPGTIKKITFLE 59
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G+ V HKIE +D+ NL SYS++ GA L D EKI++D++ V P+GGS K K
Sbjct: 60 DGETKFVLHKIESIDEANLGYSYSVVGGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKY 119
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
TKG+ E +++ GK K+ A+ KA+EAYLLA+PD
Sbjct: 120 ETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 155
>pdb|1XDF|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
pdb|1XDF|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2a From Yellow Lupine
Length = 157
Score = 140 bits (354), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV TFE T + PAR++KALV ++D + PK +AI++I+ VEG+GG G+IKK+T E
Sbjct: 1 GVFTFEDESTSTIAPARLYKALVKDADAIIPKAV-EAIQSIETVEGNGGPGTIKKLTLIE 59
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
GG+ V HKIE VD+ NL+ +YSI+ G L D +EKIS++ + V +GGSI K K+
Sbjct: 60 GGETKYVLHKIEAVDEANLRYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKI 119
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
TKG+ + EE+ A K + A KA+E YL A+P+
Sbjct: 120 ETKGDAQPNEEEGKAAKARGDAFFKAIENYLSAHPE 155
>pdb|2QIM|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With Cytokinin
pdb|3E85|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr-10.2b From Yellow Lupine In Complex With
Diphenylurea
Length = 158
Score = 140 bits (352), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
MGV TF+ T + PA+++KALV ++D + PK + I+++++VEG+GG G+IKK+TF
Sbjct: 1 MGVFTFQDEYTSTIAPAKLYKALVTDADIIIPKAV-ETIQSVEIVEGNGGPGTIKKLTFI 59
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK 120
EGG+ V HKIE +D+ NL +YSI+ G L D +EKIS++ + V +GGSI K K
Sbjct: 60 EGGESKYVLHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIK 119
Query: 121 LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
+ TKG+ + EE+ A K + A KA+E+YL A+PD
Sbjct: 120 IETKGDAQPNEEEGKAAKARGDAFFKAIESYLSAHPD 156
>pdb|1ICX|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1a From Yellow Lupine
Length = 155
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
G+ FE+ + V PA+++KAL +SD++ PK+ + I+++++VEG+GG G+IKKI
Sbjct: 1 GIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIH 59
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G + V HK++ +D+ NL +YSII G L + LEKISY+++ +P PDGGSI K K
Sbjct: 60 DGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKF 119
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
+TKG++ ++E + K K + KA+E Y+LA+PD
Sbjct: 120 HTKGDV-LSETVRDQAKFKGLGLFKAIEGYVLAHPD 154
>pdb|1IFV|A Chain A, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
pdb|1IFV|B Chain B, Crystal Structure Of Pathogenesis-Related Protein
Llpr10.1b From Yellow Lupine
Length = 155
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV FE AV A++FKAL +SD + PK+ + I+++++VEG+GG G++KKIT +
Sbjct: 1 GVFAFEDEHPSAVAQAKLFKALTKDSDDIIPKVI-EQIQSVEIVEGNGGPGTVKKITASH 59
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
GG + V HKI+ +D+ + + +YSI+ G L + LEKI+++++ + PDGGSI K K
Sbjct: 60 GGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDESLEKITFESKLLSGPDGGSIGKIKVKF 119
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
+TKG++ +++ K + + KA+E Y+LANP+
Sbjct: 120 HTKGDV-LSDAVREEAKARGTGLFKAVEGYVLANPN 154
>pdb|3RWS|A Chain A, Crystal Structure Of Medicago Truncatula Nodulin 13
(Mtn13) In Complex With Trans-Zeatin
Length = 168
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
MGVIT ES ++ ++++ +V + + ++PK P I+ + +EGDGG G+IKK+TF
Sbjct: 6 MGVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFV 65
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQ-LEKISYDNQWVPSPDGGSICKTIC 119
G K I+ VD+ N +YS+ EG L+DQ LEKI ++ + VP+P+ G I K+
Sbjct: 66 --GDFGSTKQHIDMVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTT 123
Query: 120 KLYTKG-ELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
K YTKG ++E++++ AG E+ KA+E++LLANPD
Sbjct: 124 KYYTKGDDIELSKDYLEAGIERFEGFTKAVESFLLANPD 162
>pdb|1TW0|A Chain A, Native Crystal Structure Of Spe16
pdb|1TW0|B Chain B, Native Crystal Structure Of Spe16
pdb|1TXC|A Chain A, Complex Crystal Structure Of Spe16 With Ans
pdb|1TXC|B Chain B, Complex Crystal Structure Of Spe16 With Ans
Length = 157
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Query: 2 GVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAE 61
GV F + +V PA+++KAL +SD + KI I++I++VEG+GG G+IKKIT E
Sbjct: 1 GVFVFRDETSSSVAPAKLYKALTKDSDTIAQKI-DGPIQSIELVEGNGGVGTIKKITANE 59
Query: 62 GGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKL 121
G + + V K++ +D+ NL YSI+ G L + LEK+S++ + V GGSI K K
Sbjct: 60 GDKTSFVLQKVDAIDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKF 119
Query: 122 YTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANP 156
+TKG+ +++ + K A KA+E Y+LANP
Sbjct: 120 HTKGDAPLSDAVRDDALAKGAGFFKAIEGYVLANP 154
>pdb|2BK0|A Chain A, Crystal Structure Of The Major Celery Allergen Api G 1
pdb|2BK0|B Chain B, Crystal Structure Of The Major Celery Allergen Api G 1
Length = 154
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
MGV T T +V ++F+ V++ D + PK P A K++++ +GDGG G++K IT
Sbjct: 1 MGVQTHVLELTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVEI-KGDGGPGTLKIITLP 59
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK 120
+GG + + +I+ V+K L YS+I+G IL +E I VP+ DGGSICKT
Sbjct: 60 DGGPITTMTLRIDGVNKEALTFDYSVIDGDILLGFIESIENHVVLVPTADGGSICKTTAI 119
Query: 121 LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLAN 155
+TKG+ V EE E++ A+ KALEAYL+AN
Sbjct: 120 FHTKGDAVVPEENIKYANEQNTALFKALEAYLIAN 154
>pdb|3IE5|A Chain A, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
pdb|3IE5|B Chain B, Crystal Structure Of Hyp-1 Protein From Hypericum
Perforatum (St John's Wort) Involved In Hypericin
Biosynthesis
Length = 165
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
M T + + P R+FKALVLE Q+ K P K+ +++EGDGG G++ KITF
Sbjct: 7 MAAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFV 66
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK 120
+G + + HK +E+D N Y++ EG +L D +EK+ Y+ + + + GGS K
Sbjct: 67 DGHPLTYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVK-LEAVGGGSKGKITVT 125
Query: 121 LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPDV 158
+ K V EE+ G++K+ K +E YL ANP+V
Sbjct: 126 YHPKPGCTVNEEEVKIGEKKAYEFYKQVEEYLAANPEV 163
>pdb|2WQL|A Chain A, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|B Chain B, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|C Chain C, Crystal Structure Of The Major Carrot Allergen Dau C 1
pdb|2WQL|D Chain D, Crystal Structure Of The Major Carrot Allergen Dau C 1
Length = 154
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 1 MGVITFESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFA 60
MG + T +V ++F +VL+ D + PK A K+++V +GDGGAG+++ IT
Sbjct: 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLP 59
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICK 120
EG + + + + V+K L ++I+G IL +E I VP+ DGGSI KT
Sbjct: 60 EGSPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAI 119
Query: 121 LYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLAN 155
+TKG+ V EE ++ A+ KA+EAYL+AN
Sbjct: 120 FHTKGDAVVPEENIKFADAQNTALFKAIEAYLIAN 154
>pdb|3US7|A Chain A, Crystal Structure Of Phytohormone Binding Protein From
Medicago Truncatula In Complex With Gibberellic Acid
(Ga3)
Length = 156
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 6 FESNDTYAVPPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEG-GQ 64
F + T V ++ A + + PK+ P+ +K++ V+EGDGG G+ F G
Sbjct: 5 FNTQTTLNVGLEALWAAQSKDITLVVPKVLPNIVKDVQVIEGDGGVGTKLIFNFLPGIAP 64
Query: 65 VNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYTK 124
VN + I E D+++ ++EG L L Q+ + ++ K+
Sbjct: 65 VNYQREVITEYDELSHTIGLQVVEGGYLNQGLSYYKTTFQFSAISENKTLVN--VKISYD 122
Query: 125 GELEVTEEQFNAGK--EKSAAMVKALEAYLL 153
E E+ EE+ K E + + LE +LL
Sbjct: 123 HESELIEEKVKPTKTSESTLFYLGQLEKFLL 153
>pdb|2FLH|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|2FLH|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein
From Mung Bean In Complex With Cytokinin
pdb|3C0V|A Chain A, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|B Chain B, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|C Chain C, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
pdb|3C0V|D Chain D, Crystal Structure Of Cytokinin-Specific Binding Protein
In Complex With Cytokinin And Ta6br12
Length = 155
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 32 PKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEVDKVNLKTSYSIIEGAI 91
PK+ P +K++ ++EGDGG G+I F + + +I E D+ + + +IEG
Sbjct: 31 PKVLPHIVKDVQLIEGDGGVGTILIFNFLPEVSPSYQREEITEFDESSHEIGLQVIEGGY 90
Query: 92 LADQL 96
L+ L
Sbjct: 91 LSQGL 95
>pdb|3NJ1|A Chain A, X-Ray Crystal Structure Of The Pyl2(V114i)-Pyrabactin A
Complex
Length = 193
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 49 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 106
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ I+ G + ++ N+++ + D G + + + YT
Sbjct: 107 DDDHRVLSFRIVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 153
>pdb|3UJL|A Chain A, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 177
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 35 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 92
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 93 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 139
>pdb|3KAZ|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KAZ|C Chain C, Crystal Structure Of Abscisic Acid Receptor Pyl2
pdb|3KB0|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2
pdb|3KB3|A Chain A, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 176
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 34 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 91
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 92 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 138
>pdb|3NMP|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMP|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 Mutant
A93f In Complex With Pyrabactin
pdb|3NMT|A Chain A, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
pdb|3NMV|A Chain A, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
Length = 178
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 35 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPFSTSTERLEFV 92
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 93 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 139
>pdb|3NJ0|A Chain A, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|B Chain B, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
pdb|3NJ0|C Chain C, X-Ray Crystal Structure Of The Pyl2-Pyrabactin A Complex
Length = 193
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 49 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 106
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 107 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 153
>pdb|3NMH|A Chain A, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|B Chain B, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
pdb|3NMH|C Chain C, Crystal Structure Of The Abscisic Receptor Pyl2 In Complex
With Pyrabactin
Length = 178
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 35 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 92
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 93 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 139
>pdb|3KDH|A Chain A, Structure Of Ligand-Free Pyl2
pdb|3KDH|B Chain B, Structure Of Ligand-Free Pyl2
pdb|3KDH|C Chain C, Structure Of Ligand-Free Pyl2
pdb|3KDI|A Chain A, Structure Of (+)-Aba Bound Pyl2
pdb|3NR4|A Chain A, Pyrabactin-Bound Pyl2
pdb|3NR4|B Chain B, Pyrabactin-Bound Pyl2
pdb|3NR4|C Chain C, Pyrabactin-Bound Pyl2
pdb|3NS2|A Chain A, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|B Chain B, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3NS2|C Chain C, High-Resolution Structure Of Pyrabactin-Bound Pyl2
pdb|3KL1|A Chain A, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
pdb|3KL1|B Chain B, Crystal Structure Of Abscisic Acid Receptor Pyl2 At 1.55 A
Length = 190
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 16 PARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEV 75
PA + L+ D P+ + +K ++ GDG GS++++T G + ++E V
Sbjct: 46 PASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFV 103
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGSICKTICKLYT 123
D + S+ ++ G + ++ N+++ + D G + + + YT
Sbjct: 104 DDDHRVLSFRVVGGEHRLKNYKSVTSVNEFL-NQDSGKVYTVVLESYT 150
>pdb|2VNE|A Chain A, The X-Ray Structure Of Norcoclaurine Synthase From
Thalictrum Flavum
pdb|2VNE|B Chain B, The X-Ray Structure Of Norcoclaurine Synthase From
Thalictrum Flavum
pdb|2VQ5|A Chain A, X-Ray Structure Of Norcoclaurine Synthase From Thalictrum
Flavum In Complex With Dopamine And Hydroxybenzaldehyde
pdb|2VQ5|B Chain B, X-Ray Structure Of Norcoclaurine Synthase From Thalictrum
Flavum In Complex With Dopamine And Hydroxybenzaldehyde
Length = 201
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 31 FPKIFPDAIKNIDVVEGDGGAGSIKKITFAEGGQVNDVKHKIEEVDKVNLKTSYSIIEGA 90
P + P A + ++++ GDGG G+I TF G ++ K K VD + IEG
Sbjct: 57 LPDLLPGAFEKLEII-GDGGVGTILDXTFVPGEFPHEYKEKFILVDNEHRLKKVQXIEGG 115
Query: 91 IL 92
L
Sbjct: 116 YL 117
>pdb|3OV6|A Chain A, Cd1c In Complex With Mpm
(Mannosyl-Beta1-Phosphomycoketide)
Length = 397
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 105 WVPSPDGGSICKTICKLYTKGELEVTEEQFN---------------AGKEKSAAMVKALE 149
WVPSP GS+ +++C L VTE +N AGK VK E
Sbjct: 248 WVPSPGCGSLAQSVCHLLNHQYEGVTETVYNLIRSTCPRFLLGLLDAGKMYVHRQVKP-E 306
Query: 150 AYLLANP 156
A+L + P
Sbjct: 307 AWLSSGP 313
>pdb|3QRZ|A Chain A, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|B Chain B, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
pdb|3QRZ|C Chain C, Crystal Structure Of Native Abscisic Acid Receptor Pyl5 At
2.6 Angstrom
Length = 223
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 15 PPARMFKALVLESDQLFPKIFPDAIKNIDVVEGDG-GAGSIKKITFAEGGQVNDVKHKIE 73
PP ++ ALV D PK++ + I+ +V+GDG G ++++ G ++E
Sbjct: 89 PPESVW-ALVRRFDN--PKVYKNFIRQCRIVQGDGLHVGDLREVMVVSGLPAVSSTERLE 145
Query: 74 EVDKVNLKTSYSIIEG 89
+D+ S+S++ G
Sbjct: 146 ILDEERHVISFSVVGG 161
>pdb|2I9Y|A Chain A, Solution Structure Of Arabidopsis Thaliana Protein
At1g70830, A Member Of The Major Latex Protein Family
Length = 166
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 17 ARMFKALVLESDQLFPKIFPDAIKNIDVVEGDGGA-GSIKKITFAEGGQVNDVKHKIEEV 75
A F + K P I+ D+ EGD G GSI + G+ K +IE V
Sbjct: 29 ADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAV 88
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDG-GSI 114
+ ++ +IEG ++ + + Q P P G GSI
Sbjct: 89 EPDKNLITFRVIEGDLMK-EYKSFLLTIQVTPKPGGPGSI 127
>pdb|1W2Q|A Chain A, Allergen Arah6 From Peanut (Arachis Hypogaea)
Length = 127
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 61 EGGQVNDVKHKIEEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPDGGS-ICKTIC 119
E G+ D +VD+VNLK I I+ +Q + SYD + S D C +
Sbjct: 6 ERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELN 65
Query: 120 KL-YTKGEL-----EVTEEQFNAGKEKSAAMVKALEAYLLANPDVCN 160
++ T+G + ++ E Q + +++ MV+ + L++ P CN
Sbjct: 66 EMENTQGCMCEALQQIMENQCDRLQDRQ--MVQQFKRELMSLPQQCN 110
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 28.5 bits (62), Expect = 1.9, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVKHKI-EEVDKVNLKTSYSIIEGAI 91
+ + +++ID+VEGD G I F + G +ND++ + +E+D +L + E I
Sbjct: 224 YMEEMRHIDMVEGDEGRMCINMEWGAFGDDGSLNDIRTEFDQEIDMGSLNPGKQLFEKMI 283
>pdb|1XZ0|A Chain A, Crystal Structure Of Cd1a In Complex With A Synthetic
Mycobactin Lipopeptide
pdb|1XZ0|C Chain C, Crystal Structure Of Cd1a In Complex With A Synthetic
Mycobactin Lipopeptide
Length = 279
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 102 DNQWVPSPDGGSICKTICKLYTKGELE 128
+N W+P P G++ K CK+ + + E
Sbjct: 128 NNSWLPYPVAGNMAKHFCKVLNQNQHE 154
>pdb|1ONQ|A Chain A, Crystal Structure Of Cd1a In Complex With A Sulfatide
pdb|1ONQ|C Chain C, Crystal Structure Of Cd1a In Complex With A Sulfatide
Length = 283
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 102 DNQWVPSPDGGSICKTICKLYTKGELE 128
+N W+P P G++ K CK+ + + E
Sbjct: 128 NNSWLPYPVAGNMAKHFCKVLNQNQHE 154
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 26.9 bits (58), Expect = 4.4, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVKHKIE-EVDKVNLKTSYSIIEGAI 91
+ + +++ID+VEGD G I F + G + D++ + + E+D+ +L + E +
Sbjct: 238 YMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMV 297
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 26.9 bits (58), Expect = 4.5, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVKHKIE-EVDKVNLKTSYSIIEGAI 91
+ + +++ID+VEGD G I F + G + D++ + + E+D+ +L + E +
Sbjct: 238 YMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMV 297
Score = 25.8 bits (55), Expect = 10.0, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVK-HKIEEVDKVNL---KTSYS-II 87
+ + +KN+++VEGD G I F + G ++D++ H VD+ +L K Y +I
Sbjct: 686 YMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMI 745
Query: 88 EGAILADQLEKISYD 102
G L + + I D
Sbjct: 746 SGMYLGEIVRNILID 760
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 73 EEVDKVNLKTSYSIIEGAILADQLEKISYDNQWVPSPD 110
E + + Y I +G ++ L+ + YDNQ P P+
Sbjct: 349 HEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPE 386
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 15 PPARMFKALVLESDQLFPKIFPDAIKNIDVVE--GDGGAGSIKKITFAEGGQVNDVKHKI 72
PP R K L + D L + P+ + DV+E G+G GS+ K E GQ+ +K
Sbjct: 10 PPRRQLKKL--DEDSLTKQ--PEEV--FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP 63
Query: 73 EEVDKVNLKTSYSIIE 88
E D + SI++
Sbjct: 64 VESDLQEIIKEISIMQ 79
>pdb|4H2K|A Chain A, Crystal Structure Of The Catalytic Domain Of
Succinyl-Diaminopimelate Desuccinylase From Haemophilus
Influenzae
pdb|4H2K|B Chain B, Crystal Structure Of The Catalytic Domain Of
Succinyl-Diaminopimelate Desuccinylase From Haemophilus
Influenzae
Length = 269
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 102 DNQWVPSPDGGSICKTICKLYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
+NQW P I + LY +G ++ K AAM+ A E Y+ ANP+
Sbjct: 79 ENQWSSPPFSAEIIDGM--LYGRGAADM--------KGSLAAMIVAAEEYVKANPN 124
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 26.2 bits (56), Expect = 8.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVKHKIE-EVDKVNLKTSYSIIEGAI 91
+ + +++ID+VEGD G I F + G + D++ + + E+D+ +L + E +
Sbjct: 238 YMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRELDRGSLNPGKQLFEKMV 297
>pdb|3IC1|A Chain A, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate
Desuccinylase From Haemophilus Influenzae
pdb|3IC1|B Chain B, Crystal Structure Of Zinc-Bound Succinyl-Diaminopimelate
Desuccinylase From Haemophilus Influenzae
pdb|3ISZ|A Chain A, Crystal Structure Of Mono-zinc Form Of
Succinyl-diaminopimelate Desuccinylase From Haemophilus
Influenzae
pdb|3ISZ|B Chain B, Crystal Structure Of Mono-zinc Form Of
Succinyl-diaminopimelate Desuccinylase From Haemophilus
Influenzae
Length = 377
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 10/56 (17%)
Query: 102 DNQWVPSPDGGSICKTICKLYTKGELEVTEEQFNAGKEKSAAMVKALEAYLLANPD 157
+NQW P I + LY +G ++ K AAM+ A E Y+ ANP+
Sbjct: 76 ENQWSSPPFSAEIIDGM--LYGRGAADM--------KGSLAAMIVAAEEYVKANPN 121
>pdb|4H8P|A Chain A, Neat5 Domain Of Isdx2, A B. Anthracis Hemophore In Complex
With Heme
Length = 129
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 76 DKVNLKTSYSIIEGAILADQLEKISYDNQWVPSP 109
D NLK I +L D+ E+IS NQ+V SP
Sbjct: 7 DPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSP 40
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 25.8 bits (55), Expect = 9.9, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVK-HKIEEVDKVNL---KTSYS-II 87
+ + +KN+++VEGD G I F + G ++D++ H VD+ +L K Y +I
Sbjct: 686 YMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMI 745
Query: 88 EGAILADQLEKISYD 102
G L + + I D
Sbjct: 746 SGMYLGEIVRNILID 760
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 25.8 bits (55), Expect = 9.9, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 35 FPDAIKNIDVVEGDGGAGSIKKI--TFAEGGQVNDVK-HKIEEVDKVNL---KTSYS-II 87
+ + +KN+++VEGD G I F + G ++D++ H VD+ +L K Y +I
Sbjct: 686 YMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMI 745
Query: 88 EGAILADQLEKISYD 102
G L + + I D
Sbjct: 746 SGMYLGEIVRNILID 760
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,986,934
Number of Sequences: 62578
Number of extensions: 205952
Number of successful extensions: 475
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 420
Number of HSP's gapped (non-prelim): 57
length of query: 160
length of database: 14,973,337
effective HSP length: 91
effective length of query: 69
effective length of database: 9,278,739
effective search space: 640232991
effective search space used: 640232991
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)