Query 036871
Match_columns 383
No_of_seqs 132 out of 1271
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 10:10:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.5E-49 1.5E-53 365.0 23.7 341 7-383 13-361 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.1E-44 3.6E-49 341.3 32.0 349 5-383 4-373 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.1E-45 7.1E-50 347.3 26.4 361 1-383 1-387 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 4E-44 1.4E-48 336.2 26.9 345 6-383 8-366 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1.6E-43 5.5E-48 331.2 27.4 349 1-383 1-359 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.3E-32 4.4E-37 256.8 25.2 318 5-383 10-337 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.4E-32 3.2E-36 249.1 18.2 292 6-383 21-320 (400)
8 1iir_A Glycosyltransferase GTF 100.0 4.7E-30 1.6E-34 238.7 17.2 295 8-383 1-317 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 4.7E-29 1.6E-33 232.1 20.0 303 4-383 17-329 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 1.9E-28 6.4E-33 227.0 22.9 300 5-383 2-313 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 1.1E-28 3.8E-33 229.5 21.1 296 8-383 1-318 (416)
12 2iyf_A OLED, oleandomycin glyc 100.0 4.5E-28 1.5E-32 226.5 22.8 305 1-383 1-315 (430)
13 3h4t_A Glycosyltransferase GTF 100.0 1.6E-29 5.3E-34 234.1 12.5 286 8-383 1-300 (404)
14 2yjn_A ERYCIII, glycosyltransf 99.9 3.8E-27 1.3E-31 220.8 10.6 302 5-383 18-351 (441)
15 2p6p_A Glycosyl transferase; X 99.9 5.5E-26 1.9E-30 209.2 15.1 283 8-383 1-295 (384)
16 3oti_A CALG3; calicheamicin, T 99.9 2.2E-25 7.4E-30 206.1 15.0 283 5-383 18-315 (398)
17 4fzr_A SSFS6; structural genom 99.9 9E-25 3.1E-29 202.0 15.7 290 5-383 13-316 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 4.1E-23 1.4E-27 190.4 14.9 283 8-383 2-302 (391)
19 3otg_A CALG1; calicheamicin, T 99.9 1.1E-20 3.9E-25 175.2 20.9 290 5-383 18-324 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.7 2.6E-15 8.9E-20 136.5 17.9 257 8-383 3-268 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.6 6.4E-15 2.2E-19 119.0 7.9 97 270-383 5-102 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.2 7.9E-10 2.7E-14 100.3 17.1 259 8-383 7-270 (364)
23 2jzc_A UDP-N-acetylglucosamine 98.4 3.2E-07 1.1E-11 76.0 6.3 96 285-383 27-148 (224)
24 3hbm_A UDP-sugar hydrolase; PS 98.4 2E-05 6.7E-10 68.0 17.2 82 286-383 157-240 (282)
25 3okp_A GDP-mannose-dependent a 98.2 0.00025 8.4E-09 64.4 20.4 108 5-146 2-115 (394)
26 3fro_A GLGA glycogen synthase; 98.1 0.0035 1.2E-07 57.6 26.0 133 6-149 1-154 (439)
27 1v4v_A UDP-N-acetylglucosamine 98.0 0.00013 4.3E-09 66.1 15.6 112 6-145 4-120 (376)
28 3c48_A Predicted glycosyltrans 98.0 0.0013 4.5E-08 60.6 21.7 41 5-45 18-69 (438)
29 1vgv_A UDP-N-acetylglucosamine 98.0 0.00021 7.2E-09 64.7 15.4 111 8-146 1-116 (384)
30 2gek_A Phosphatidylinositol ma 97.9 0.0018 6.2E-08 58.9 20.9 113 6-147 19-137 (406)
31 3dzc_A UDP-N-acetylglucosamine 97.8 0.0013 4.4E-08 59.9 18.4 115 5-146 23-141 (396)
32 2iuy_A Avigt4, glycosyltransfe 97.8 0.00013 4.4E-09 65.1 11.3 41 5-45 1-57 (342)
33 3ot5_A UDP-N-acetylglucosamine 97.7 0.00097 3.3E-08 60.9 15.3 115 5-146 25-144 (403)
34 2jjm_A Glycosyl transferase, g 97.5 0.047 1.6E-06 49.2 23.0 39 7-45 15-54 (394)
35 2x6q_A Trehalose-synthase TRET 97.4 0.0044 1.5E-07 56.6 15.0 42 5-46 38-81 (416)
36 2r60_A Glycosyl transferase, g 97.2 0.0014 4.7E-08 61.7 10.3 131 1-149 1-152 (499)
37 4hwg_A UDP-N-acetylglucosamine 96.8 0.026 9E-07 51.0 13.8 113 6-146 8-123 (385)
38 3beo_A UDP-N-acetylglucosamine 95.6 0.057 2E-06 48.2 9.8 113 6-146 7-125 (375)
39 1rzu_A Glycogen synthase 1; gl 95.4 0.042 1.4E-06 51.2 8.2 37 8-44 1-43 (485)
40 2qzs_A Glycogen synthase; glyc 94.9 0.074 2.5E-06 49.5 8.4 37 8-44 1-43 (485)
41 2iw1_A Lipopolysaccharide core 94.6 0.2 6.8E-06 44.5 10.2 37 8-44 1-40 (374)
42 3s28_A Sucrose synthase 1; gly 93.2 0.23 8E-06 49.2 8.3 32 118-149 406-439 (816)
43 2wqk_A 5'-nucleotidase SURE; S 92.9 0.35 1.2E-05 40.5 7.7 41 7-49 1-41 (251)
44 2ywr_A Phosphoribosylglycinami 91.5 2.1 7.2E-05 34.8 10.7 108 7-149 1-111 (216)
45 2phj_A 5'-nucleotidase SURE; S 90.8 0.82 2.8E-05 38.0 7.6 41 8-50 2-42 (251)
46 3av3_A Phosphoribosylglycinami 90.7 3.2 0.00011 33.7 11.0 108 7-149 3-113 (212)
47 3auf_A Glycinamide ribonucleot 90.7 2.8 9.5E-05 34.5 10.7 109 6-149 21-132 (229)
48 1psw_A ADP-heptose LPS heptosy 90.3 0.78 2.7E-05 40.4 7.7 103 8-145 1-106 (348)
49 3tov_A Glycosyl transferase fa 90.2 1.7 5.7E-05 38.4 9.7 106 5-145 6-115 (349)
50 2f9f_A First mannosyl transfer 89.6 0.79 2.7E-05 35.8 6.5 84 288-383 24-117 (177)
51 2x0d_A WSAF; GT4 family, trans 89.3 0.24 8.4E-06 45.0 3.6 41 5-45 44-89 (413)
52 3vue_A GBSS-I, granule-bound s 88.4 0.44 1.5E-05 45.0 4.8 39 6-44 8-52 (536)
53 2hy7_A Glucuronosyltransferase 88.2 2.5 8.6E-05 38.1 9.6 38 6-44 13-52 (406)
54 1g5t_A COB(I)alamin adenosyltr 86.6 8.9 0.0003 30.5 10.7 102 7-130 28-131 (196)
55 1jkx_A GART;, phosphoribosylgl 86.3 9.9 0.00034 30.7 11.1 107 8-149 1-110 (212)
56 3zqu_A Probable aromatic acid 86.2 1.3 4.4E-05 35.8 5.7 40 6-46 3-42 (209)
57 3kcq_A Phosphoribosylglycinami 86.1 7.3 0.00025 31.6 10.1 106 3-149 4-113 (215)
58 1mvl_A PPC decarboxylase athal 84.1 1.3 4.5E-05 35.8 4.8 44 5-50 17-60 (209)
59 3lqk_A Dipicolinate synthase s 83.8 1.8 6.1E-05 34.8 5.4 44 5-48 5-48 (201)
60 3iqw_A Tail-anchored protein t 83.7 8.2 0.00028 33.7 10.2 40 7-46 15-55 (334)
61 4ds3_A Phosphoribosylglycinami 83.7 7.1 0.00024 31.5 9.0 110 4-149 4-117 (209)
62 3ug7_A Arsenical pump-driving 82.6 9.1 0.00031 33.6 10.1 42 5-46 23-65 (349)
63 1ccw_A Protein (glutamate muta 82.5 1.9 6.4E-05 32.3 4.9 40 6-45 2-41 (137)
64 1meo_A Phosophoribosylglycinam 82.1 16 0.00054 29.4 10.5 106 9-149 2-110 (209)
65 3qjg_A Epidermin biosynthesis 81.9 1.8 6.1E-05 33.9 4.6 43 8-51 6-48 (175)
66 1p3y_1 MRSD protein; flavoprot 81.8 1.4 4.7E-05 35.3 4.0 43 5-48 6-48 (194)
67 3rfo_A Methionyl-tRNA formyltr 81.7 3.6 0.00012 35.7 6.9 37 5-46 2-38 (317)
68 3tqr_A Phosphoribosylglycinami 81.3 13 0.00045 30.0 9.7 109 6-149 4-114 (215)
69 2bw0_A 10-FTHFDH, 10-formyltet 81.0 5.7 0.0002 34.6 8.1 40 110-149 90-130 (329)
70 4gyw_A UDP-N-acetylglucosamine 79.7 3.2 0.00011 40.7 6.7 91 285-383 521-618 (723)
71 2ejb_A Probable aromatic acid 79.6 3.5 0.00012 32.7 5.7 40 8-48 2-41 (189)
72 4dim_A Phosphoribosylglycinami 78.5 10 0.00034 34.0 9.3 35 5-44 5-39 (403)
73 3q0i_A Methionyl-tRNA formyltr 78.4 6.6 0.00022 34.0 7.5 36 5-45 5-40 (318)
74 3ih5_A Electron transfer flavo 77.6 5.5 0.00019 32.4 6.5 110 7-147 3-122 (217)
75 1qzu_A Hypothetical protein MD 77.5 2.3 7.8E-05 34.3 4.1 45 5-50 17-62 (206)
76 3mcu_A Dipicolinate synthase, 77.5 2.8 9.5E-05 33.8 4.5 42 5-47 3-45 (207)
77 1kjn_A MTH0777; hypotethical p 76.9 4 0.00014 30.5 4.8 45 1-46 1-47 (157)
78 3da8_A Probable 5'-phosphoribo 76.5 17 0.00057 29.4 9.0 109 5-149 10-120 (215)
79 2yxb_A Coenzyme B12-dependent 76.4 3.8 0.00013 31.5 4.9 40 6-45 17-56 (161)
80 1g63_A Epidermin modifying enz 75.0 2.6 8.9E-05 33.2 3.7 42 8-50 3-44 (181)
81 1y80_A Predicted cobalamin bin 74.5 5.9 0.0002 31.9 5.9 45 6-50 87-131 (210)
82 2i2x_B MTAC, methyltransferase 74.0 7.9 0.00027 32.4 6.7 45 6-50 122-166 (258)
83 1sbz_A Probable aromatic acid 74.0 4.9 0.00017 32.1 5.1 40 8-48 1-41 (197)
84 3vot_A L-amino acid ligase, BL 73.9 17 0.00058 32.8 9.5 36 5-45 3-38 (425)
85 3igf_A ALL4481 protein; two-do 73.6 11 0.00036 33.6 7.8 37 7-43 1-38 (374)
86 4b4o_A Epimerase family protei 72.4 4.1 0.00014 34.7 4.8 34 8-45 1-34 (298)
87 1id1_A Putative potassium chan 70.1 4.7 0.00016 30.4 4.1 34 6-44 2-35 (153)
88 3io3_A DEHA2D07832P; chaperone 69.3 17 0.00059 31.8 8.1 39 7-45 17-58 (348)
89 3q3e_A HMW1C-like glycosyltran 69.2 9.8 0.00034 36.3 6.7 91 287-383 441-537 (631)
90 1fmt_A Methionyl-tRNA FMet for 68.7 12 0.00043 32.2 6.9 40 110-149 72-112 (314)
91 2r8r_A Sensor protein; KDPD, P 68.6 9.2 0.00031 31.3 5.7 40 6-45 5-44 (228)
92 3p9x_A Phosphoribosylglycinami 68.3 45 0.0015 26.8 10.8 108 7-149 2-112 (211)
93 3tqq_A Methionyl-tRNA formyltr 68.1 11 0.00036 32.7 6.3 34 8-46 3-36 (314)
94 3u7q_B Nitrogenase molybdenum- 67.9 52 0.0018 30.7 11.3 34 110-146 429-469 (523)
95 3ezx_A MMCP 1, monomethylamine 67.7 6.9 0.00024 31.7 4.8 46 5-50 90-135 (215)
96 3mc3_A DSRE/DSRF-like family p 67.5 12 0.0004 27.6 5.7 38 8-45 16-56 (134)
97 3tov_A Glycosyl transferase fa 67.0 46 0.0016 29.0 10.5 101 7-149 185-289 (349)
98 3ty2_A 5'-nucleotidase SURE; s 66.4 8 0.00027 32.3 4.9 43 6-50 10-52 (261)
99 3gpi_A NAD-dependent epimerase 65.4 6.3 0.00022 33.3 4.4 34 6-44 2-35 (286)
100 2g1u_A Hypothetical protein TM 65.1 7.6 0.00026 29.3 4.4 39 1-44 13-51 (155)
101 2gk4_A Conserved hypothetical 64.4 8.8 0.0003 31.5 4.8 26 18-45 28-53 (232)
102 2qs7_A Uncharacterized protein 64.0 12 0.00042 28.0 5.3 37 9-45 10-46 (144)
103 3dhn_A NAD-dependent epimerase 63.8 7.9 0.00027 31.2 4.6 34 7-44 4-37 (227)
104 3to5_A CHEY homolog; alpha(5)b 63.6 11 0.00037 27.9 4.8 38 112-149 50-96 (134)
105 3qhp_A Type 1 capsular polysac 63.5 25 0.00085 26.3 7.3 72 287-373 2-80 (166)
106 2lpm_A Two-component response 63.4 6 0.0002 28.8 3.3 37 110-146 44-85 (123)
107 3vps_A TUNA, NAD-dependent epi 61.9 8.1 0.00028 33.0 4.5 40 1-44 1-40 (321)
108 1f9y_A HPPK, protein (6-hydrox 61.9 9 0.00031 29.3 4.1 28 288-315 2-29 (158)
109 3gl9_A Response regulator; bet 61.2 17 0.00057 25.7 5.5 40 110-149 37-85 (122)
110 3kkl_A Probable chaperone prot 61.1 14 0.00048 30.6 5.6 39 6-44 2-51 (244)
111 2qx0_A 7,8-dihydro-6-hydroxyme 61.1 13 0.00044 28.4 4.8 28 288-315 3-30 (159)
112 2bln_A Protein YFBG; transfera 60.3 47 0.0016 28.4 8.9 40 110-149 66-106 (305)
113 3ip0_A 2-amino-4-hydroxy-6-hyd 59.6 10 0.00036 28.9 4.1 28 288-315 2-29 (158)
114 2hy5_B Intracellular sulfur ox 58.4 14 0.00046 27.4 4.5 43 1-45 1-46 (136)
115 3eag_A UDP-N-acetylmuramate:L- 58.1 12 0.00039 32.6 4.8 36 6-45 3-38 (326)
116 3qbc_A 2-amino-4-hydroxy-6-hyd 58.1 12 0.00041 28.7 4.2 29 287-315 5-33 (161)
117 3bgw_A DNAB-like replicative h 57.8 53 0.0018 29.8 9.3 45 7-51 197-241 (444)
118 2gt1_A Lipopolysaccharide hept 57.4 6.4 0.00022 34.1 3.0 44 8-51 1-46 (326)
119 3llv_A Exopolyphosphatase-rela 57.2 8.2 0.00028 28.5 3.2 34 6-44 5-38 (141)
120 1cbk_A Protein (7,8-dihydro-6- 57.1 12 0.00041 28.6 4.1 28 288-315 3-30 (160)
121 1qgu_B Protein (nitrogenase mo 56.1 85 0.0029 29.2 10.5 34 110-146 425-465 (519)
122 1jx7_A Hypothetical protein YC 55.7 15 0.00051 26.0 4.3 28 18-45 15-44 (117)
123 2xj4_A MIPZ; replication, cell 55.7 15 0.00051 31.1 5.0 40 6-45 2-43 (286)
124 1hdo_A Biliverdin IX beta redu 55.7 17 0.00059 28.5 5.2 33 8-44 4-36 (206)
125 3pdi_B Nitrogenase MOFE cofact 55.3 11 0.00039 34.5 4.4 34 110-146 366-399 (458)
126 3beo_A UDP-N-acetylglucosamine 55.2 12 0.00043 32.6 4.6 85 285-383 204-297 (375)
127 1y1p_A ARII, aldehyde reductas 54.5 19 0.00063 31.1 5.6 37 3-43 7-43 (342)
128 1e2b_A Enzyme IIB-cellobiose; 54.4 30 0.001 24.2 5.6 39 6-44 2-40 (106)
129 3g0o_A 3-hydroxyisobutyrate de 54.1 9.1 0.00031 32.8 3.4 38 1-43 1-38 (303)
130 3l6d_A Putative oxidoreductase 53.9 10 0.00035 32.5 3.7 38 1-43 3-40 (306)
131 2r6j_A Eugenol synthase 1; phe 53.5 15 0.00052 31.4 4.8 33 9-45 13-45 (318)
132 3e8x_A Putative NAD-dependent 53.0 17 0.00059 29.4 4.9 35 6-44 20-54 (236)
133 1dhr_A Dihydropteridine reduct 52.6 18 0.00062 29.5 4.9 39 1-43 1-39 (241)
134 3oy2_A Glycosyltransferase B73 52.4 14 0.00048 32.9 4.5 37 8-45 1-40 (413)
135 3t6k_A Response regulator rece 51.9 28 0.00097 25.0 5.5 39 111-149 40-87 (136)
136 3m6m_D Sensory/regulatory prot 51.7 20 0.00068 26.2 4.7 40 110-149 49-99 (143)
137 3ius_A Uncharacterized conserv 51.3 15 0.00052 30.8 4.4 33 7-44 5-37 (286)
138 3f6p_A Transcriptional regulat 51.3 31 0.0011 24.0 5.6 40 110-149 37-82 (120)
139 2q5c_A NTRC family transcripti 51.3 88 0.003 24.6 8.6 36 111-149 134-169 (196)
140 2zts_A Putative uncharacterize 51.2 22 0.00076 28.9 5.3 42 9-50 32-74 (251)
141 1cyd_A Carbonyl reductase; sho 50.7 24 0.00082 28.6 5.4 39 1-43 1-39 (244)
142 2a5l_A Trp repressor binding p 50.6 23 0.00077 27.8 5.1 41 5-45 3-44 (200)
143 1rw7_A YDR533CP; alpha-beta sa 49.6 33 0.0011 28.2 6.0 39 7-45 3-52 (243)
144 3ic5_A Putative saccharopine d 49.2 24 0.00082 24.5 4.6 33 6-43 4-37 (118)
145 2b69_A UDP-glucuronate decarbo 49.2 20 0.00067 31.1 4.9 35 5-43 25-59 (343)
146 3rpe_A MDAB, modulator of drug 49.2 27 0.00092 28.3 5.2 43 2-44 20-69 (218)
147 3kjh_A CO dehydrogenase/acetyl 49.1 16 0.00055 29.8 4.1 38 9-46 2-39 (254)
148 3n7t_A Macrophage binding prot 48.9 35 0.0012 28.2 6.0 38 7-44 9-57 (247)
149 3of5_A Dethiobiotin synthetase 48.8 26 0.0009 28.5 5.3 37 6-42 3-40 (228)
150 1psw_A ADP-heptose LPS heptosy 48.4 1.2E+02 0.0042 25.9 10.0 36 110-149 254-289 (348)
151 2vsy_A XCC0866; transferase, g 48.3 39 0.0013 31.6 7.1 39 6-44 204-246 (568)
152 2xci_A KDO-transferase, 3-deox 48.0 57 0.0019 28.7 7.8 35 8-44 41-75 (374)
153 2pd6_A Estradiol 17-beta-dehyd 47.7 31 0.0011 28.4 5.7 39 1-43 1-39 (264)
154 1o97_C Electron transferring f 47.4 28 0.00096 29.1 5.3 40 110-149 103-148 (264)
155 3hn2_A 2-dehydropantoate 2-red 47.3 20 0.00068 30.8 4.5 33 8-45 3-35 (312)
156 1bg6_A N-(1-D-carboxylethyl)-L 47.2 15 0.00053 32.0 3.9 34 5-43 2-35 (359)
157 2vo1_A CTP synthase 1; pyrimid 47.0 24 0.00083 29.5 4.6 43 5-47 20-65 (295)
158 3f6r_A Flavodoxin; FMN binding 46.9 29 0.001 25.6 4.9 38 8-45 2-40 (148)
159 2ew2_A 2-dehydropantoate 2-red 46.8 16 0.00053 31.2 3.8 32 7-43 3-34 (316)
160 3f67_A Putative dienelactone h 46.4 29 0.00099 27.6 5.3 37 7-43 31-67 (241)
161 1efv_B Electron transfer flavo 46.3 30 0.001 28.8 5.2 40 110-149 107-152 (255)
162 1u7z_A Coenzyme A biosynthesis 46.2 21 0.00073 29.0 4.2 26 18-45 33-58 (226)
163 1lss_A TRK system potassium up 46.0 17 0.00059 26.3 3.5 32 7-43 4-35 (140)
164 3sxp_A ADP-L-glycero-D-mannohe 45.9 30 0.001 30.2 5.6 36 5-44 8-45 (362)
165 3c1o_A Eugenol synthase; pheny 45.7 21 0.00073 30.4 4.5 35 7-45 4-38 (321)
166 2dpo_A L-gulonate 3-dehydrogen 45.6 16 0.00055 31.6 3.6 38 1-44 1-38 (319)
167 4dgk_A Phytoene dehydrogenase; 45.6 11 0.00038 34.8 2.8 33 7-44 1-33 (501)
168 3q9l_A Septum site-determining 45.5 25 0.00087 28.8 4.8 38 8-45 2-41 (260)
169 2wm1_A 2-amino-3-carboxymucona 45.5 23 0.0008 30.6 4.7 47 274-323 127-176 (336)
170 3o1l_A Formyltetrahydrofolate 45.1 1.4E+02 0.0049 25.3 10.9 106 6-149 104-212 (302)
171 3bul_A Methionine synthase; tr 45.0 33 0.0011 32.4 5.8 45 6-50 97-141 (579)
172 3obb_A Probable 3-hydroxyisobu 44.8 22 0.00074 30.4 4.3 31 7-42 3-33 (300)
173 3ghy_A Ketopantoate reductase 44.3 16 0.00056 31.7 3.5 32 7-43 3-34 (335)
174 1qyd_A Pinoresinol-lariciresin 44.2 25 0.00084 29.9 4.7 35 7-45 4-38 (313)
175 1efp_B ETF, protein (electron 44.1 31 0.0011 28.6 5.0 40 110-149 104-149 (252)
176 2gas_A Isoflavone reductase; N 44.0 20 0.00067 30.4 4.0 35 7-45 2-36 (307)
177 2pnf_A 3-oxoacyl-[acyl-carrier 43.9 31 0.0011 28.0 5.1 39 1-43 1-39 (248)
178 3doj_A AT3G25530, dehydrogenas 43.8 23 0.00079 30.3 4.4 34 5-43 19-52 (310)
179 1gsa_A Glutathione synthetase; 43.7 21 0.00072 30.3 4.1 37 8-44 2-41 (316)
180 1cp2_A CP2, nitrogenase iron p 43.7 28 0.00095 28.9 4.8 39 8-46 2-40 (269)
181 1nff_A Putative oxidoreductase 43.5 37 0.0013 28.0 5.5 39 1-43 1-39 (260)
182 2zki_A 199AA long hypothetical 43.5 26 0.00089 27.5 4.4 39 6-45 3-42 (199)
183 3gt7_A Sensor protein; structu 43.4 41 0.0014 24.7 5.4 39 111-149 43-90 (154)
184 3pdi_A Nitrogenase MOFE cofact 43.4 17 0.00057 33.6 3.6 34 109-145 391-424 (483)
185 1g3q_A MIND ATPase, cell divis 43.4 31 0.001 27.8 4.9 38 9-46 4-42 (237)
186 2q6t_A DNAB replication FORK h 43.1 71 0.0024 28.9 7.7 42 7-48 200-242 (444)
187 2x4g_A Nucleoside-diphosphate- 42.7 30 0.001 29.7 5.0 34 7-44 13-46 (342)
188 3fwz_A Inner membrane protein 42.7 27 0.00092 25.6 4.1 34 7-45 7-40 (140)
189 2yvq_A Carbamoyl-phosphate syn 42.3 39 0.0014 25.1 4.9 96 11-145 27-130 (143)
190 2w36_A Endonuclease V; hypoxan 42.2 20 0.00068 29.1 3.4 40 110-149 92-140 (225)
191 3eod_A Protein HNR; response r 42.1 57 0.0019 22.9 5.8 38 1-42 1-38 (130)
192 1zi8_A Carboxymethylenebutenol 41.8 38 0.0013 26.8 5.2 37 7-43 27-63 (236)
193 3c3m_A Response regulator rece 41.6 46 0.0016 23.8 5.3 39 111-149 39-86 (138)
194 3i83_A 2-dehydropantoate 2-red 41.4 24 0.00082 30.4 4.1 33 8-45 3-35 (320)
195 1dbw_A Transcriptional regulat 41.4 53 0.0018 22.9 5.5 40 110-149 38-84 (126)
196 3slg_A PBGP3 protein; structur 41.4 25 0.00084 30.8 4.3 36 5-44 22-58 (372)
197 2hmt_A YUAA protein; RCK, KTN, 41.4 17 0.00059 26.4 2.8 33 6-43 5-37 (144)
198 3d3w_A L-xylulose reductase; u 41.0 47 0.0016 26.8 5.7 39 1-43 1-39 (244)
199 3u7q_A Nitrogenase molybdenum- 40.7 17 0.00057 33.7 3.1 34 109-145 407-440 (492)
200 4hb9_A Similarities with proba 40.6 22 0.00075 31.5 3.9 30 8-42 2-31 (412)
201 4dzz_A Plasmid partitioning pr 40.6 34 0.0012 26.7 4.7 38 9-46 3-41 (206)
202 4dll_A 2-hydroxy-3-oxopropiona 40.5 35 0.0012 29.4 5.0 33 6-43 30-62 (320)
203 1xp8_A RECA protein, recombina 40.5 84 0.0029 27.7 7.5 41 9-49 76-116 (366)
204 2gdz_A NAD+-dependent 15-hydro 40.4 45 0.0015 27.5 5.6 39 1-43 1-39 (267)
205 3end_A Light-independent proto 40.3 38 0.0013 28.8 5.2 41 6-46 40-80 (307)
206 3dff_A Teicoplanin pseudoaglyc 40.3 36 0.0012 28.6 4.9 41 2-43 2-43 (273)
207 2jah_A Clavulanic acid dehydro 40.3 43 0.0015 27.3 5.4 39 1-43 1-39 (247)
208 3fgn_A Dethiobiotin synthetase 40.3 39 0.0013 28.0 5.0 37 6-42 25-62 (251)
209 2xvy_A Chelatase, putative; me 40.1 50 0.0017 27.5 5.8 39 286-324 10-50 (269)
210 4eg0_A D-alanine--D-alanine li 40.0 47 0.0016 28.4 5.8 39 7-45 13-55 (317)
211 4e5v_A Putative THUA-like prot 39.9 37 0.0013 28.7 4.9 39 5-44 2-43 (281)
212 1mio_B Nitrogenase molybdenum 39.8 27 0.00092 32.0 4.3 34 110-146 376-409 (458)
213 1xjc_A MOBB protein homolog; s 39.8 61 0.0021 24.9 5.8 39 7-45 4-42 (169)
214 2afh_E Nitrogenase iron protei 39.7 37 0.0013 28.5 5.0 40 7-46 2-41 (289)
215 2pk3_A GDP-6-deoxy-D-LYXO-4-he 39.6 33 0.0011 29.2 4.8 35 6-44 11-45 (321)
216 2a33_A Hypothetical protein; s 39.5 59 0.002 26.2 5.8 39 5-43 11-53 (215)
217 2h78_A Hibadh, 3-hydroxyisobut 39.5 29 0.00098 29.5 4.3 33 6-43 2-34 (302)
218 3nhm_A Response regulator; pro 39.5 60 0.002 22.8 5.6 39 110-148 38-85 (133)
219 4huj_A Uncharacterized protein 39.4 16 0.00056 29.4 2.6 34 5-43 21-54 (220)
220 2rjn_A Response regulator rece 39.4 51 0.0018 24.1 5.3 41 110-150 42-89 (154)
221 2hy5_A Putative sulfurtransfer 39.3 53 0.0018 23.7 5.2 33 12-44 6-41 (130)
222 1z7e_A Protein aRNA; rossmann 39.2 80 0.0028 30.3 7.8 40 110-149 66-106 (660)
223 1f0y_A HCDH, L-3-hydroxyacyl-C 38.8 26 0.00089 29.8 3.9 34 6-44 14-47 (302)
224 3pid_A UDP-glucose 6-dehydroge 38.7 25 0.00084 31.9 3.8 36 2-43 31-66 (432)
225 3cg4_A Response regulator rece 38.6 56 0.0019 23.3 5.4 38 1-42 1-38 (142)
226 2z1m_A GDP-D-mannose dehydrata 38.6 34 0.0012 29.4 4.7 33 8-44 4-36 (345)
227 1evy_A Glycerol-3-phosphate de 38.6 17 0.00058 32.0 2.8 32 7-43 15-46 (366)
228 3lrx_A Putative hydrogenase; a 38.5 26 0.00089 26.5 3.4 37 7-46 23-59 (158)
229 4fu0_A D-alanine--D-alanine li 38.5 19 0.00064 31.7 3.0 39 5-43 1-43 (357)
230 3dfi_A Pseudoaglycone deacetyl 38.5 44 0.0015 28.0 5.2 42 1-43 1-43 (270)
231 3h7a_A Short chain dehydrogena 38.2 97 0.0033 25.3 7.3 39 1-43 1-39 (252)
232 1tmy_A CHEY protein, TMY; chem 38.1 55 0.0019 22.5 5.1 37 113-149 41-84 (120)
233 1ehi_A LMDDL2, D-alanine:D-lac 38.0 31 0.001 30.6 4.3 38 7-44 3-45 (377)
234 2z1n_A Dehydrogenase; reductas 37.7 55 0.0019 26.8 5.7 32 9-43 8-39 (260)
235 1wcv_1 SOJ, segregation protei 37.7 35 0.0012 28.1 4.4 40 7-46 6-46 (257)
236 2qxy_A Response regulator; reg 37.7 57 0.0019 23.3 5.3 39 110-149 39-84 (142)
237 1p9o_A Phosphopantothenoylcyst 37.6 20 0.00069 30.8 2.9 23 24-46 68-90 (313)
238 3a10_A Response regulator; pho 37.6 75 0.0026 21.5 5.8 39 111-149 37-82 (116)
239 2vsy_A XCC0866; transferase, g 37.6 37 0.0013 31.7 5.1 33 349-383 434-472 (568)
240 1tvm_A PTS system, galactitol- 37.5 94 0.0032 21.8 6.1 38 5-42 19-57 (113)
241 1iow_A DD-ligase, DDLB, D-ALA\ 37.5 50 0.0017 27.8 5.6 38 8-45 3-44 (306)
242 2wtm_A EST1E; hydrolase; 1.60A 37.5 48 0.0017 26.7 5.3 35 8-42 27-63 (251)
243 3ai3_A NADPH-sorbose reductase 37.4 57 0.0019 26.8 5.8 39 1-43 1-39 (263)
244 4e7p_A Response regulator; DNA 37.3 61 0.0021 23.5 5.4 42 108-149 55-103 (150)
245 3qxc_A Dethiobiotin synthetase 37.3 39 0.0014 27.8 4.6 37 6-42 19-57 (242)
246 1zgz_A Torcad operon transcrip 37.2 59 0.002 22.4 5.2 40 110-149 37-82 (122)
247 2r85_A PURP protein PF1517; AT 37.1 33 0.0011 29.4 4.4 32 8-45 3-34 (334)
248 2vpq_A Acetyl-COA carboxylase; 37.0 72 0.0025 28.8 6.8 32 8-44 2-33 (451)
249 2ph1_A Nucleotide-binding prot 36.9 42 0.0014 27.7 4.8 41 7-47 17-59 (262)
250 1hyq_A MIND, cell division inh 36.6 35 0.0012 28.1 4.3 38 9-46 4-42 (263)
251 3grc_A Sensor protein, kinase; 36.5 57 0.002 23.2 5.1 39 111-149 42-89 (140)
252 2pzm_A Putative nucleotide sug 36.4 44 0.0015 28.6 5.1 34 6-43 19-52 (330)
253 3goc_A Endonuclease V; alpha-b 36.2 65 0.0022 26.3 5.5 41 109-149 95-144 (237)
254 3nrb_A Formyltetrahydrofolate 36.1 2E+02 0.0067 24.3 10.1 107 6-149 87-196 (287)
255 2raf_A Putative dinucleotide-b 36.1 37 0.0013 27.0 4.2 33 6-43 18-50 (209)
256 4f0j_A Probable hydrolytic enz 36.0 37 0.0013 28.1 4.4 36 9-44 47-82 (315)
257 2q62_A ARSH; alpha/beta, flavo 36.0 56 0.0019 26.9 5.3 39 5-43 32-73 (247)
258 3qha_A Putative oxidoreductase 36.0 25 0.00087 29.8 3.3 32 7-43 15-46 (296)
259 4fbl_A LIPS lipolytic enzyme; 35.9 22 0.00075 29.7 2.9 31 11-41 54-84 (281)
260 2ew8_A (S)-1-phenylethanol deh 35.9 55 0.0019 26.7 5.4 32 9-43 8-39 (249)
261 3k96_A Glycerol-3-phosphate de 35.8 28 0.00094 30.6 3.6 34 6-44 28-61 (356)
262 3pfb_A Cinnamoyl esterase; alp 35.8 49 0.0017 26.7 5.1 36 8-43 46-83 (270)
263 3lou_A Formyltetrahydrofolate 35.7 2E+02 0.0069 24.3 10.3 106 6-149 94-202 (292)
264 4e12_A Diketoreductase; oxidor 35.7 37 0.0013 28.6 4.3 33 6-43 3-35 (283)
265 3hwr_A 2-dehydropantoate 2-red 35.6 30 0.001 29.7 3.8 31 6-41 18-48 (318)
266 3hv2_A Response regulator/HD d 35.4 53 0.0018 24.0 4.8 40 110-149 49-95 (153)
267 1i24_A Sulfolipid biosynthesis 35.4 40 0.0014 29.8 4.8 35 5-43 9-43 (404)
268 1oi4_A Hypothetical protein YH 35.3 1E+02 0.0035 24.0 6.7 39 6-45 22-60 (193)
269 2c5a_A GDP-mannose-3', 5'-epim 35.1 45 0.0015 29.3 5.0 35 6-44 28-62 (379)
270 1ydg_A Trp repressor binding p 35.1 58 0.002 25.7 5.2 40 6-45 5-45 (211)
271 3dez_A OPRT, oprtase, orotate 35.1 70 0.0024 26.3 5.7 28 119-146 100-129 (243)
272 3kkj_A Amine oxidase, flavin-c 35.0 22 0.00075 29.0 2.8 19 25-43 15-33 (336)
273 1pno_A NAD(P) transhydrogenase 35.0 44 0.0015 25.6 3.9 39 7-45 23-64 (180)
274 3dkr_A Esterase D; alpha beta 34.9 34 0.0011 27.2 3.9 35 8-42 22-56 (251)
275 3kht_A Response regulator; PSI 34.9 81 0.0028 22.6 5.7 40 110-149 42-90 (144)
276 3ruf_A WBGU; rossmann fold, UD 34.9 46 0.0016 28.7 5.0 35 7-45 25-59 (351)
277 1ydh_A AT5G11950; structural g 34.9 72 0.0025 25.7 5.6 38 6-43 8-49 (216)
278 3cg0_A Response regulator rece 34.8 58 0.002 23.1 4.9 40 110-149 45-91 (140)
279 1qyc_A Phenylcoumaran benzylic 34.6 35 0.0012 28.7 4.1 34 7-44 4-37 (308)
280 4g6h_A Rotenone-insensitive NA 34.6 28 0.00097 32.2 3.7 35 6-45 41-75 (502)
281 1d4o_A NADP(H) transhydrogenas 34.5 45 0.0015 25.6 3.9 39 7-45 22-63 (184)
282 3lzw_A Ferredoxin--NADP reduct 34.4 15 0.00052 31.4 1.7 35 6-45 6-40 (332)
283 1orr_A CDP-tyvelose-2-epimeras 34.4 44 0.0015 28.7 4.8 31 9-43 3-33 (347)
284 3b2n_A Uncharacterized protein 34.4 57 0.002 23.1 4.7 40 110-149 40-86 (133)
285 3obi_A Formyltetrahydrofolate 34.3 2.1E+02 0.0072 24.1 10.1 104 6-149 88-197 (288)
286 3fet_A Electron transfer flavo 34.2 71 0.0024 24.4 5.3 39 109-149 61-102 (166)
287 2iw1_A Lipopolysaccharide core 34.1 64 0.0022 27.8 5.8 86 286-383 195-290 (374)
288 2ixd_A LMBE-related protein; h 34.1 47 0.0016 27.3 4.5 34 8-42 4-38 (242)
289 2a9o_A Response regulator; ess 34.0 69 0.0024 21.8 5.1 37 113-149 39-81 (120)
290 2x5n_A SPRPN10, 26S proteasome 33.8 73 0.0025 25.0 5.5 35 9-43 108-143 (192)
291 2c20_A UDP-glucose 4-epimerase 33.7 34 0.0012 29.2 3.9 32 8-43 2-33 (330)
292 1xhf_A DYE resistance, aerobic 33.7 79 0.0027 21.7 5.4 38 112-149 40-83 (123)
293 1gee_A Glucose 1-dehydrogenase 33.7 47 0.0016 27.2 4.6 32 9-43 8-39 (261)
294 1byi_A Dethiobiotin synthase; 33.6 52 0.0018 26.1 4.8 33 9-41 3-36 (224)
295 2z04_A Phosphoribosylaminoimid 33.6 51 0.0018 28.7 5.1 34 7-45 1-34 (365)
296 3i42_A Response regulator rece 33.6 59 0.002 22.7 4.6 39 110-148 38-85 (127)
297 4gi5_A Quinone reductase; prot 33.5 76 0.0026 26.7 5.8 38 5-42 20-60 (280)
298 3nbm_A PTS system, lactose-spe 33.5 89 0.003 21.9 5.3 38 5-42 4-41 (108)
299 3afn_B Carbonyl reductase; alp 33.5 37 0.0013 27.7 3.9 33 9-44 8-40 (258)
300 3m2p_A UDP-N-acetylglucosamine 33.5 50 0.0017 27.9 4.9 32 9-44 4-35 (311)
301 1imj_A CIB, CCG1-interacting f 33.3 70 0.0024 24.6 5.5 38 7-44 31-70 (210)
302 3lte_A Response regulator; str 33.3 79 0.0027 22.1 5.4 38 111-148 42-87 (132)
303 2rjn_A Response regulator rece 33.2 83 0.0028 22.9 5.6 39 1-43 1-39 (154)
304 3sc6_A DTDP-4-dehydrorhamnose 33.2 25 0.00084 29.4 2.8 31 9-43 7-37 (287)
305 1uan_A Hypothetical protein TT 33.1 55 0.0019 26.5 4.8 21 107-127 83-103 (227)
306 2qzj_A Two-component response 33.0 61 0.0021 23.1 4.7 39 111-149 40-84 (136)
307 1srr_A SPO0F, sporulation resp 33.0 59 0.002 22.5 4.6 37 113-149 41-84 (124)
308 3f2v_A General stress protein 33.0 35 0.0012 26.9 3.5 36 7-42 1-37 (192)
309 2pl1_A Transcriptional regulat 32.9 91 0.0031 21.2 5.6 40 110-149 35-81 (121)
310 3dfu_A Uncharacterized protein 32.9 33 0.0011 28.0 3.4 33 6-43 5-37 (232)
311 1e6u_A GDP-fucose synthetase; 32.7 36 0.0012 28.9 3.8 32 8-43 4-35 (321)
312 3ax6_A Phosphoribosylaminoimid 32.6 70 0.0024 28.1 5.8 34 7-45 1-34 (380)
313 3ea0_A ATPase, para family; al 32.6 40 0.0014 27.2 4.0 39 8-46 4-45 (245)
314 3cu5_A Two component transcrip 32.6 71 0.0024 22.9 5.1 36 112-147 42-84 (141)
315 3dtt_A NADP oxidoreductase; st 32.5 42 0.0014 27.5 4.0 34 5-43 17-50 (245)
316 2q1w_A Putative nucleotide sug 32.5 52 0.0018 28.2 4.9 35 6-44 20-54 (333)
317 3hdv_A Response regulator; PSI 32.4 74 0.0025 22.4 5.1 39 1-43 1-39 (136)
318 3l4e_A Uncharacterized peptida 32.4 65 0.0022 25.7 5.0 48 274-321 16-63 (206)
319 1weh_A Conserved hypothetical 32.4 58 0.002 25.1 4.5 38 8-45 2-43 (171)
320 3gi1_A LBP, laminin-binding pr 32.4 1.7E+02 0.006 24.5 8.0 40 108-147 217-258 (286)
321 3gt7_A Sensor protein; structu 32.2 74 0.0025 23.3 5.2 39 1-43 1-39 (154)
322 2xws_A Sirohydrochlorin cobalt 32.1 48 0.0016 24.0 3.9 64 286-358 4-70 (133)
323 2vrn_A Protease I, DR1199; cys 32.1 1.2E+02 0.004 23.4 6.5 40 5-45 7-46 (190)
324 4e3z_A Putative oxidoreductase 32.1 56 0.0019 27.1 4.8 34 7-43 25-58 (272)
325 3dm5_A SRP54, signal recogniti 32.0 80 0.0027 28.7 6.0 41 8-48 101-141 (443)
326 3crn_A Response regulator rece 32.0 81 0.0028 22.2 5.2 39 111-149 39-84 (132)
327 2i87_A D-alanine-D-alanine lig 32.0 24 0.00081 31.0 2.6 39 6-44 2-44 (364)
328 3oh8_A Nucleoside-diphosphate 31.9 52 0.0018 30.5 5.0 34 7-44 147-180 (516)
329 1sb8_A WBPP; epimerase, 4-epim 31.9 55 0.0019 28.3 5.0 35 6-44 26-60 (352)
330 2fsv_C NAD(P) transhydrogenase 31.8 51 0.0017 25.8 3.9 39 7-45 46-87 (203)
331 3bfv_A CAPA1, CAPB2, membrane 31.5 84 0.0029 26.2 5.8 41 7-47 81-123 (271)
332 3pdu_A 3-hydroxyisobutyrate de 31.5 36 0.0012 28.7 3.5 32 7-43 1-32 (287)
333 3fni_A Putative diflavin flavo 31.5 98 0.0034 23.2 5.7 40 6-45 3-43 (159)
334 3cky_A 2-hydroxymethyl glutara 31.4 54 0.0018 27.6 4.7 33 6-43 3-35 (301)
335 1z82_A Glycerol-3-phosphate de 31.4 41 0.0014 29.0 4.0 31 8-43 15-45 (335)
336 1zem_A Xylitol dehydrogenase; 31.4 71 0.0024 26.2 5.4 32 9-43 8-39 (262)
337 1xq6_A Unknown protein; struct 31.3 69 0.0024 25.7 5.3 34 6-43 3-38 (253)
338 1u0t_A Inorganic polyphosphate 31.3 50 0.0017 28.2 4.5 37 7-43 4-41 (307)
339 2wsb_A Galactitol dehydrogenas 31.3 79 0.0027 25.6 5.7 32 9-43 12-43 (254)
340 3zq6_A Putative arsenical pump 31.3 58 0.002 28.0 4.9 38 8-45 14-52 (324)
341 3b6i_A Flavoprotein WRBA; flav 31.3 65 0.0022 25.0 4.9 38 8-45 2-41 (198)
342 1e4e_A Vancomycin/teicoplanin 31.2 32 0.0011 29.9 3.2 39 6-44 2-44 (343)
343 3s40_A Diacylglycerol kinase; 31.2 66 0.0023 27.3 5.2 42 5-46 6-50 (304)
344 1djl_A Transhydrogenase DIII; 31.1 53 0.0018 25.8 3.9 39 7-45 45-86 (207)
345 3t4x_A Oxidoreductase, short c 30.9 80 0.0027 26.0 5.6 32 9-43 11-42 (267)
346 1qkk_A DCTD, C4-dicarboxylate 30.9 71 0.0024 23.3 4.9 41 110-150 38-85 (155)
347 2qr3_A Two-component system re 30.8 69 0.0023 22.7 4.7 40 111-150 39-90 (140)
348 4hv4_A UDP-N-acetylmuramate--L 30.8 58 0.002 30.1 5.1 34 6-43 21-54 (494)
349 1p6q_A CHEY2; chemotaxis, sign 30.7 74 0.0025 22.1 4.8 29 111-139 43-73 (129)
350 3cz5_A Two-component response 30.7 1E+02 0.0035 22.3 5.7 39 111-149 43-88 (153)
351 2xdq_B Light-independent proto 30.6 30 0.001 32.2 3.1 34 110-146 363-396 (511)
352 2r6a_A DNAB helicase, replicat 30.5 1.9E+02 0.0064 26.2 8.4 42 7-48 203-245 (454)
353 1jbe_A Chemotaxis protein CHEY 30.5 1E+02 0.0034 21.3 5.5 40 110-149 40-88 (128)
354 3rht_A (gatase1)-like protein; 30.4 34 0.0012 28.5 3.1 38 6-47 3-42 (259)
355 1mb3_A Cell division response 30.4 63 0.0022 22.3 4.3 36 113-148 39-83 (124)
356 2c29_D Dihydroflavonol 4-reduc 30.4 43 0.0015 28.7 4.0 27 15-43 11-37 (337)
357 3edm_A Short chain dehydrogena 30.4 63 0.0022 26.5 4.9 34 8-44 8-41 (259)
358 3ksu_A 3-oxoacyl-acyl carrier 30.3 85 0.0029 25.8 5.7 32 9-43 12-43 (262)
359 2rdm_A Response regulator rece 30.2 1E+02 0.0034 21.4 5.5 39 111-149 41-88 (132)
360 3d59_A Platelet-activating fac 30.2 39 0.0013 29.7 3.7 39 7-45 97-135 (383)
361 3sty_A Methylketone synthase 1 30.2 45 0.0015 26.8 3.9 35 9-43 13-47 (267)
362 3l18_A Intracellular protease 30.2 1E+02 0.0035 23.1 5.8 38 7-45 2-39 (168)
363 2fx5_A Lipase; alpha-beta hydr 30.2 39 0.0013 27.5 3.5 37 7-43 48-84 (258)
364 3aek_B Light-independent proto 30.1 29 0.001 32.4 2.9 35 109-146 339-373 (525)
365 3qit_A CURM TE, polyketide syn 30.1 44 0.0015 27.0 3.9 36 9-44 27-62 (286)
366 3m3h_A OPRT, oprtase, orotate 29.9 76 0.0026 25.9 5.1 28 119-146 88-117 (234)
367 1ihu_A Arsenical pump-driving 29.9 52 0.0018 31.1 4.7 45 1-45 1-46 (589)
368 2e6c_A 5'-nucleotidase SURE; S 29.9 70 0.0024 26.3 4.8 41 9-51 2-42 (244)
369 3lyu_A Putative hydrogenase; t 29.9 48 0.0017 24.4 3.6 35 7-44 18-52 (142)
370 2b4a_A BH3024; flavodoxin-like 29.8 79 0.0027 22.4 4.9 39 109-147 49-95 (138)
371 3ihm_A Styrene monooxygenase A 29.8 33 0.0011 30.9 3.2 33 8-45 23-55 (430)
372 1ks9_A KPA reductase;, 2-dehyd 29.8 49 0.0017 27.6 4.1 31 9-44 2-32 (291)
373 2j48_A Two-component sensor ki 29.8 87 0.003 21.0 5.0 39 111-149 37-84 (119)
374 2pn1_A Carbamoylphosphate synt 29.7 66 0.0023 27.5 5.1 34 6-45 3-38 (331)
375 3pe6_A Monoglyceride lipase; a 29.7 43 0.0015 27.4 3.8 36 8-43 42-77 (303)
376 3ioy_A Short-chain dehydrogena 29.6 77 0.0026 27.1 5.4 32 9-43 9-40 (319)
377 2bon_A Lipid kinase; DAG kinas 29.6 63 0.0022 27.9 4.9 38 7-44 29-66 (332)
378 3op4_A 3-oxoacyl-[acyl-carrier 29.6 86 0.003 25.5 5.5 33 8-43 9-41 (248)
379 3eul_A Possible nitrate/nitrit 29.6 69 0.0023 23.3 4.6 42 108-149 50-98 (152)
380 2cg8_A Dihydroneopterin aldola 29.5 55 0.0019 27.4 4.2 27 287-313 120-146 (270)
381 4ao6_A Esterase; hydrolase, th 29.5 43 0.0015 27.5 3.6 38 7-44 55-94 (259)
382 2fuk_A XC6422 protein; A/B hyd 29.5 77 0.0026 24.6 5.1 36 8-43 37-77 (220)
383 2d1p_A TUSD, hypothetical UPF0 29.4 1.2E+02 0.0042 22.3 5.8 36 8-43 13-52 (140)
384 3h1g_A Chemotaxis protein CHEY 29.4 1.2E+02 0.0041 21.1 5.8 33 117-149 49-90 (129)
385 3lk7_A UDP-N-acetylmuramoylala 29.4 72 0.0024 29.0 5.4 34 6-44 8-41 (451)
386 3e1t_A Halogenase; flavoprotei 29.4 32 0.0011 31.9 3.1 40 1-45 1-40 (512)
387 3rqi_A Response regulator prot 29.4 58 0.002 24.9 4.2 40 110-149 42-88 (184)
388 4eso_A Putative oxidoreductase 29.4 72 0.0025 26.1 5.0 32 9-43 9-40 (255)
389 4e21_A 6-phosphogluconate dehy 29.3 39 0.0013 29.7 3.4 33 6-43 21-53 (358)
390 3jte_A Response regulator rece 29.2 94 0.0032 22.1 5.3 33 117-149 47-86 (143)
391 3f5d_A Protein YDEA; unknow pr 29.2 52 0.0018 26.2 3.9 39 6-45 2-41 (206)
392 3c97_A Signal transduction his 29.2 1.1E+02 0.0038 21.6 5.6 27 112-138 47-75 (140)
393 3sbx_A Putative uncharacterize 29.1 85 0.0029 24.6 5.0 36 7-43 13-52 (189)
394 3lf2_A Short chain oxidoreduct 29.1 78 0.0027 26.0 5.2 33 8-43 8-40 (265)
395 4hcj_A THIJ/PFPI domain protei 29.1 1.2E+02 0.0041 23.4 5.9 36 9-45 10-45 (177)
396 3mjf_A Phosphoribosylamine--gl 28.8 54 0.0018 29.6 4.4 26 6-36 2-27 (431)
397 3i4f_A 3-oxoacyl-[acyl-carrier 28.8 71 0.0024 26.2 4.9 34 8-44 7-40 (264)
398 4gbj_A 6-phosphogluconate dehy 28.7 59 0.002 27.6 4.5 29 9-42 7-35 (297)
399 3g79_A NDP-N-acetyl-D-galactos 28.6 78 0.0027 29.1 5.4 36 5-45 16-53 (478)
400 3ew7_A LMO0794 protein; Q8Y8U8 28.6 39 0.0013 26.7 3.1 32 9-44 2-33 (221)
401 3d1l_A Putative NADP oxidoredu 28.5 28 0.00096 28.9 2.3 37 1-42 4-41 (266)
402 3n53_A Response regulator rece 28.5 57 0.0019 23.3 3.9 40 110-149 37-85 (140)
403 2v4n_A Multifunctional protein 28.4 79 0.0027 26.2 4.9 41 8-50 2-42 (254)
404 2hbv_A 2-amino-3-carboxymucona 28.4 81 0.0028 27.0 5.4 46 274-323 131-179 (334)
405 1hjr_A Holliday junction resol 28.4 74 0.0025 24.1 4.4 45 106-150 46-105 (158)
406 1j9j_A Stationary phase surviV 28.3 77 0.0026 26.1 4.8 40 9-50 2-41 (247)
407 1yxm_A Pecra, peroxisomal tran 28.3 90 0.0031 26.2 5.6 32 9-43 19-50 (303)
408 2c5m_A CTP synthase; cytidine 28.3 46 0.0016 27.7 3.3 41 6-46 21-64 (294)
409 3cfy_A Putative LUXO repressor 28.3 82 0.0028 22.4 4.7 37 113-149 42-85 (137)
410 3nyw_A Putative oxidoreductase 28.2 64 0.0022 26.4 4.5 32 9-43 8-39 (250)
411 2bru_C NAD(P) transhydrogenase 28.2 49 0.0017 25.4 3.2 39 7-45 30-71 (186)
412 3k9g_A PF-32 protein; ssgcid, 28.2 68 0.0023 26.4 4.7 41 6-47 25-67 (267)
413 2rh8_A Anthocyanidin reductase 28.0 39 0.0013 29.0 3.3 27 15-43 15-41 (338)
414 3vtf_A UDP-glucose 6-dehydroge 28.0 51 0.0018 29.9 4.0 33 5-42 19-51 (444)
415 3dqz_A Alpha-hydroxynitrIle ly 28.0 34 0.0012 27.4 2.8 35 10-44 6-40 (258)
416 1t1j_A Hypothetical protein; s 27.9 92 0.0032 22.5 4.6 33 7-39 7-47 (125)
417 1xgk_A Nitrogen metabolite rep 27.9 64 0.0022 28.0 4.7 34 8-45 6-39 (352)
418 3o26_A Salutaridine reductase; 27.9 67 0.0023 26.9 4.8 34 7-43 11-44 (311)
419 1yio_A Response regulatory pro 27.8 76 0.0026 24.6 4.8 38 112-149 41-85 (208)
420 2ark_A Flavodoxin; FMN, struct 27.8 83 0.0028 24.3 4.9 40 6-45 3-44 (188)
421 2xxa_A Signal recognition part 27.7 1.1E+02 0.0037 27.7 6.2 41 8-48 101-142 (433)
422 2wm3_A NMRA-like family domain 27.7 58 0.002 27.3 4.3 34 8-45 6-40 (299)
423 1rcu_A Conserved hypothetical 27.7 99 0.0034 24.4 5.2 35 6-40 22-63 (195)
424 4id9_A Short-chain dehydrogena 27.6 36 0.0012 29.3 3.0 34 7-44 19-52 (347)
425 1xx6_A Thymidine kinase; NESG, 27.5 1.1E+02 0.0037 24.0 5.4 40 5-44 5-45 (191)
426 1lld_A L-lactate dehydrogenase 27.4 43 0.0015 28.6 3.4 37 3-44 3-41 (319)
427 2ae2_A Protein (tropinone redu 27.4 53 0.0018 27.0 3.9 32 9-43 10-41 (260)
428 3qsg_A NAD-binding phosphogluc 27.2 39 0.0013 28.9 3.0 33 6-43 23-56 (312)
429 3czc_A RMPB; alpha/beta sandwi 27.2 93 0.0032 21.7 4.6 38 6-43 17-56 (110)
430 1xrs_B D-lysine 5,6-aminomutas 27.1 47 0.0016 27.7 3.3 45 6-50 119-172 (262)
431 4dmm_A 3-oxoacyl-[acyl-carrier 27.1 89 0.0031 25.8 5.3 33 8-43 28-60 (269)
432 3trd_A Alpha/beta hydrolase; c 27.0 94 0.0032 23.8 5.2 36 8-43 31-71 (208)
433 1u9c_A APC35852; structural ge 26.9 1.3E+02 0.0044 24.0 6.0 38 8-45 6-52 (224)
434 3ucx_A Short chain dehydrogena 26.8 91 0.0031 25.6 5.3 32 9-43 12-43 (264)
435 3h2s_A Putative NADH-flavin re 26.8 43 0.0015 26.5 3.1 27 15-43 6-32 (224)
436 1yb4_A Tartronic semialdehyde 26.8 51 0.0017 27.7 3.7 31 7-42 3-33 (295)
437 3ftp_A 3-oxoacyl-[acyl-carrier 26.8 98 0.0033 25.6 5.4 32 9-43 29-60 (270)
438 3orf_A Dihydropteridine reduct 26.7 71 0.0024 26.0 4.5 35 7-44 21-55 (251)
439 3r6w_A FMN-dependent NADH-azor 26.7 68 0.0023 25.4 4.3 37 7-43 1-43 (212)
440 3t7c_A Carveol dehydrogenase; 26.6 1.9E+02 0.0064 24.2 7.3 33 9-44 29-61 (299)
441 2vqe_B 30S ribosomal protein S 26.6 2.7E+02 0.0093 23.0 9.3 32 118-149 157-190 (256)
442 2etv_A Iron(III) ABC transport 26.6 54 0.0019 28.5 3.9 33 115-147 92-125 (346)
443 4e6p_A Probable sorbitol dehyd 26.6 79 0.0027 25.9 4.8 32 9-43 9-40 (259)
444 1kgs_A DRRD, DNA binding respo 26.6 1E+02 0.0036 24.2 5.5 39 112-150 39-84 (225)
445 1t35_A Hypothetical protein YV 26.5 1E+02 0.0035 24.2 5.1 36 8-43 2-41 (191)
446 3l4b_C TRKA K+ channel protien 26.5 37 0.0013 27.1 2.6 31 9-44 2-32 (218)
447 3q9s_A DNA-binding response re 26.3 1.1E+02 0.0037 24.9 5.6 41 109-149 71-117 (249)
448 2l2q_A PTS system, cellobiose- 26.1 94 0.0032 21.6 4.4 36 8-43 5-40 (109)
449 3u5t_A 3-oxoacyl-[acyl-carrier 26.1 60 0.002 26.9 4.0 33 8-43 27-59 (267)
450 4egb_A DTDP-glucose 4,6-dehydr 26.1 53 0.0018 28.2 3.8 34 5-42 22-57 (346)
451 1tht_A Thioesterase; 2.10A {Vi 26.1 53 0.0018 27.8 3.7 34 9-42 36-69 (305)
452 3ga2_A Endonuclease V; alpha-b 26.1 84 0.0029 25.8 4.6 32 118-149 108-146 (246)
453 3cmw_A Protein RECA, recombina 26.0 2.6E+02 0.009 30.4 9.4 104 10-147 386-517 (1706)
454 3dii_A Short-chain dehydrogena 26.0 74 0.0025 25.8 4.5 32 9-43 3-34 (247)
455 3alj_A 2-methyl-3-hydroxypyrid 25.9 55 0.0019 28.7 3.9 34 6-44 10-43 (379)
456 4dik_A Flavoprotein; TM0755, e 25.9 47 0.0016 29.8 3.4 47 274-320 253-299 (410)
457 1js1_X Transcarbamylase; alpha 25.9 83 0.0028 27.2 4.8 40 8-47 169-208 (324)
458 3vis_A Esterase; alpha/beta-hy 25.9 80 0.0027 26.5 4.8 35 8-42 96-130 (306)
459 2jk1_A HUPR, hydrogenase trans 25.8 83 0.0028 22.3 4.4 39 111-149 36-81 (139)
460 1jfr_A Lipase; serine hydrolas 25.8 45 0.0016 27.1 3.2 37 7-43 53-89 (262)
461 2q3e_A UDP-glucose 6-dehydroge 25.6 66 0.0023 29.4 4.4 34 5-43 3-38 (467)
462 1l5x_A SurviVal protein E; str 25.6 88 0.003 26.3 4.8 40 9-50 2-41 (280)
463 2o1e_A YCDH; alpha-beta protei 25.6 2.7E+02 0.0092 23.7 8.1 39 109-147 229-269 (312)
464 1qb7_A APRT, adenine phosphori 25.6 1.5E+02 0.0052 24.0 6.2 28 119-146 71-100 (236)
465 3hzh_A Chemotaxis response reg 25.5 91 0.0031 22.8 4.6 42 108-149 70-120 (157)
466 3rm3_A MGLP, thermostable mono 25.5 58 0.002 26.3 3.8 35 9-43 41-75 (270)
467 1o57_A PUR operon repressor; p 25.5 1.4E+02 0.0049 25.1 6.2 36 110-145 121-158 (291)
468 3gem_A Short chain dehydrogena 25.5 64 0.0022 26.6 4.0 33 9-44 28-60 (260)
469 3l77_A Short-chain alcohol deh 25.4 82 0.0028 25.2 4.6 32 9-43 3-34 (235)
470 2woo_A ATPase GET3; tail-ancho 25.4 97 0.0033 26.7 5.3 39 8-46 19-58 (329)
471 1wek_A Hypothetical protein TT 25.4 82 0.0028 25.4 4.4 37 8-44 38-78 (217)
472 2d1p_B TUSC, hypothetical UPF0 25.4 1.2E+02 0.0041 21.4 4.9 34 12-45 7-42 (119)
473 2q8p_A Iron-regulated surface 25.3 63 0.0022 26.5 4.0 35 114-148 55-90 (260)
474 3qua_A Putative uncharacterize 25.2 1.1E+02 0.0039 24.1 5.2 37 7-43 22-61 (199)
475 1kjq_A GART 2, phosphoribosylg 25.2 85 0.0029 27.6 5.0 35 6-45 10-44 (391)
476 2bcg_G Secretory pathway GDP d 25.2 55 0.0019 29.7 3.8 35 6-45 10-44 (453)
477 1k68_A Phytochrome response re 25.2 1.3E+02 0.0045 20.9 5.4 33 118-150 54-95 (140)
478 4hn9_A Iron complex transport 25.2 62 0.0021 27.9 4.0 36 113-148 110-145 (335)
479 3c24_A Putative oxidoreductase 25.2 70 0.0024 26.7 4.3 32 7-43 11-43 (286)
480 1vhq_A Enhancing lycopene bios 25.2 1.6E+02 0.0054 23.7 6.3 38 7-45 6-48 (232)
481 3kfl_A Methionyl-tRNA syntheta 25.1 36 0.0012 32.1 2.6 27 19-45 44-73 (564)
482 3tox_A Short chain dehydrogena 25.1 77 0.0026 26.5 4.5 32 8-42 8-39 (280)
483 1ys7_A Transcriptional regulat 25.1 1.1E+02 0.0039 24.1 5.5 37 112-148 44-87 (233)
484 3h5i_A Response regulator/sens 25.0 1.4E+02 0.0048 21.1 5.5 36 113-148 43-86 (140)
485 1oc2_A DTDP-glucose 4,6-dehydr 25.0 68 0.0023 27.5 4.3 34 7-44 4-39 (348)
486 2r25_B Osmosensing histidine p 25.0 1.5E+02 0.005 20.8 5.6 32 118-149 51-90 (133)
487 2an1_A Putative kinase; struct 24.9 72 0.0025 26.9 4.3 36 7-42 5-41 (292)
488 3fkq_A NTRC-like two-domain pr 24.9 75 0.0026 27.9 4.6 38 7-44 142-181 (373)
489 4g65_A TRK system potassium up 24.9 28 0.00096 31.9 1.8 33 7-44 3-35 (461)
490 3e5n_A D-alanine-D-alanine lig 24.9 48 0.0016 29.5 3.2 43 4-46 19-65 (386)
491 3hn7_A UDP-N-acetylmuramate-L- 24.8 73 0.0025 29.7 4.6 36 6-45 18-53 (524)
492 1d7o_A Enoyl-[acyl-carrier pro 24.8 1.1E+02 0.0038 25.5 5.5 32 9-42 9-41 (297)
493 2obn_A Hypothetical protein; s 24.7 81 0.0028 27.6 4.5 39 6-44 151-190 (349)
494 2zay_A Response regulator rece 24.7 77 0.0026 22.7 4.0 40 110-149 43-91 (147)
495 1pzg_A LDH, lactate dehydrogen 24.6 55 0.0019 28.3 3.5 35 6-45 8-43 (331)
496 1v0j_A UDP-galactopyranose mut 24.6 45 0.0015 29.7 3.0 39 1-44 1-40 (399)
497 2pju_A Propionate catabolism o 24.6 53 0.0018 26.6 3.2 35 111-148 146-180 (225)
498 1tjn_A Sirohydrochlorin cobalt 24.5 1.2E+02 0.004 22.8 5.0 63 286-358 25-91 (156)
499 2q7d_A Inositol-tetrakisphosph 24.5 29 0.00098 30.4 1.7 44 1-44 12-55 (346)
500 3dme_A Conserved exported prot 24.5 59 0.002 28.0 3.8 33 7-44 4-36 (369)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.5e-49 Score=365.01 Aligned_cols=341 Identities=29% Similarity=0.471 Sum_probs=252.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRG--VKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
+.||+++|+|++||++||+.||+.|++|| +.||+++++.+...+.+... ....+++|+.++ ++++++.+.
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ip-----dglp~~~~~ 84 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVH-----DGLPKGYVS 84 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECC-----CCCCTTCCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecC-----CCCCCCccc
Confidence 57999999999999999999999999999 99999998644333222100 001358888875 356665543
Q ss_pred ccccchhhhHHHHHHHHHHHH-HhHHHHHHHhhc--CCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhh
Q 036871 85 LDAITNEVNKELIVKFVGATT-KLQEPLEQLLRD--HKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLA 161 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~--~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~ 161 (383)
... .. ..+..+...+. .+.+.+++++++ .++||||+|.+..|+..+|+++|||.+.|++++++....+++.+
T Consensus 85 ~~~-~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 85 SGN-PR----EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp CSC-TT----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred cCC-hH----HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 322 11 33344444443 345555555544 57999999999999999999999999999999998877776654
Q ss_pred hhCCC-C--CCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcchHHHHHH
Q 036871 162 LYEPH-K--NVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHY 238 (383)
Q Consensus 162 ~~~~~-~--~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 238 (383)
..... . .........++|+++. ++.++++.+... .....+..++.+..+...+++++++||+++||+++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 160 LIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp HHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH
Confidence 32110 0 0011122235888875 677788876211 122245667777777888899999999999999999888
Q ss_pred HHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhCCCcE
Q 036871 239 RKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEASRRNF 318 (383)
Q Consensus 239 ~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~v 318 (383)
+..+ +++++|||++...... .+..+.++.+||+.++++++|||||||+...+.+++.+++.+|++.++++
T Consensus 236 ~~~~-~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~f 305 (454)
T 3hbf_A 236 NSKF-KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPF 305 (454)
T ss_dssp HTTS-SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCE
T ss_pred HhcC-CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeE
Confidence 7655 7999999997643211 12235789999998877899999999999988999999999999999999
Q ss_pred EEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 319 IWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 319 iw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
||+++.... . .+|+++.++. ++|+++++|+||.+||+|+++++||||||+||++||
T Consensus 306 lw~~~~~~~-------~-~lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Ea 361 (454)
T 3hbf_A 306 IWSFRGDPK-------E-KLPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLEC 361 (454)
T ss_dssp EEECCSCHH-------H-HSCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred EEEeCCcch-------h-cCCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHH
Confidence 999976531 1 2788887664 567888899999999999999999999999999996
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.1e-44 Score=341.28 Aligned_cols=349 Identities=27% Similarity=0.465 Sum_probs=235.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCC--CCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPA--NGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEG 81 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 81 (383)
.+++||+++|+|+.||++||+.||++|++| ||+||+++++. +...+.+... ....+++|+.++... .++
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~----~~~- 75 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD----LTD- 75 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----CTT-
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----CCC-
Confidence 345799999999999999999999999998 99999999987 3444433100 001367888876431 111
Q ss_pred CccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhc----CCC-CEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHH
Q 036871 82 CENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRD----HKP-DCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCA 156 (383)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~ 156 (383)
.. ... .....+......+.+.+++++++ .++ |+||+|.+..++..+|+++|||++.+++++......
T Consensus 76 ~~---~~~-----~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 76 LS---SST-----RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp SC---TTC-----CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred CC---Cch-----hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 11 000 11122233344445566666654 478 999999998999999999999999999998776555
Q ss_pred HhhhhhhC--CCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCC-hhHHHHHHHHhhhcccccEEEEcchhhcchH
Q 036871 157 SNCLALYE--PHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGD-NDFSRLLKAIDDSDLRSYGVAVNSFYELEPA 233 (383)
Q Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 233 (383)
+++++... ....+.....+..+|+++. +..++++.. +... ......+.......++..++++|++.++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~ 221 (480)
T 2vch_A 148 FLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDP---AQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPN 221 (480)
T ss_dssp HHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGG---GSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHH
T ss_pred HHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchh---hhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHH
Confidence 54433111 0000000012234566543 333444443 2111 1122233334455667788999999999988
Q ss_pred HHHHHHHhc--CCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHH
Q 036871 234 YADHYRKAL--GRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGL 311 (383)
Q Consensus 234 ~~~~~~~~~--~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~ 311 (383)
....+.... .+++++|||++...... ..+.++.++.+||+.++++++|||||||+...+.+++.+++++|
T Consensus 222 ~~~~l~~~~~~~~~v~~vGpl~~~~~~~--------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al 293 (480)
T 2vch_A 222 AIKALQEPGLDKPPVYPVGPLVNIGKQE--------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGL 293 (480)
T ss_dssp HHHHHHSCCTTCCCEEECCCCCCCSCSC--------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCcEEEEeccccccccc--------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHH
Confidence 777665421 26899999997643110 01235678999999887789999999999988899999999999
Q ss_pred HhCCCcEEEEEecCCCCC--------CchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 312 EASRRNFIWVVRRNKNDG--------GEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 312 ~~~~~~viw~~~~~~~~~--------~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+++++++||+++.....+ .++++...+|+|+.++....++++.+|+||.+||+|+++++||||||+||++||
T Consensus 294 ~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Ea 373 (480)
T 2vch_A 294 ADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLES 373 (480)
T ss_dssp HHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred HhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHH
Confidence 999999999998653100 001222238999988887778888779999999999999999999999999996
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.1e-45 Score=347.30 Aligned_cols=361 Identities=27% Similarity=0.467 Sum_probs=230.8
Q ss_pred CCCCC-CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcC-CCcceEeeeCCCccCCC
Q 036871 1 MGSKV-PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMG-IELDVKTIKFPSVEAGL 78 (383)
Q Consensus 1 m~~~~-~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~ 78 (383)
|+..+ +++||+++|+|+.||++||+.||++|++|||+||+++++.+...+.+........+ .+++|+.++. ++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----GL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-----CC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----CC
Confidence 44443 46799999999999999999999999999999999998765443332210000011 2678888762 33
Q ss_pred CCCCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhh-------cCCCCEEEecCCCchHHHHHHHhCCCcEEEecchh
Q 036871 79 PEGCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLR-------DHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSF 151 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~ 151 (383)
+............ ...+..+. ..+.+.++++++ +.++||||+|.++.|+..+|+++|||++.+++++.
T Consensus 76 p~~~~~~~~~~~~--~~~~~~~~---~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~ 150 (482)
T 2pq6_A 76 TPMEGDGDVSQDV--PTLCQSVR---KNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSA 150 (482)
T ss_dssp C---------CCH--HHHHHHHT---TSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCH
T ss_pred CCcccccCcchhH--HHHHHHHH---HHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccH
Confidence 3310000000100 02222221 223344444443 25899999999999999999999999999999987
Q ss_pred hHHHHHhhhhh-----hCCCCCCC--CC----CCCcccCCCCCCcccCCCCCCccccccCC---ChhHHHHHHHHhhhcc
Q 036871 152 FSLCASNCLAL-----YEPHKNVS--SD----SEPFVMPHFPGEIKLTRNQLPDFVKQDMG---DNDFSRLLKAIDDSDL 217 (383)
Q Consensus 152 ~~~~~~~~~~~-----~~~~~~~~--~~----~~~~~~P~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~ 217 (383)
.....+.+.+. +.+..... .. .....+|+++. ++.++++.+ +.. ...+...+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~ 224 (482)
T 2pq6_A 151 CSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDF---IRTTNPNDIMLEFFIEVADRVN 224 (482)
T ss_dssp HHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGG---GCCSCTTCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchh---hccCCcccHHHHHHHHHHHhhc
Confidence 66554443332 11111000 00 01112344432 333344444 221 1234444555666777
Q ss_pred cccEEEEcchhhcchHHHHHHHHhcCCcEEEeCcCCCC-CCCccchh--ccCCCCCcChhhHhhccCCCCCCcEEEEEeC
Q 036871 218 RSYGVAVNSFYELEPAYADHYRKALGRRAWHIGPVSLC-NRNFEDKA--LWGKQASIDEQECLRWLNSKQPNSVVYICFG 294 (383)
Q Consensus 218 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~vGp~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~G 294 (383)
+++++++|++.++|++.++.+++.+ +++++|||++.. +....... ..+...|..+.++.+||+.++++++||||||
T Consensus 225 ~~~~vl~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~G 303 (482)
T 2pq6_A 225 KDTTILLNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFG 303 (482)
T ss_dssp TTCCEEESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECC
T ss_pred cCCEEEEcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecC
Confidence 8899999999999999998888777 789999999753 11100000 0001112335678999998777899999999
Q ss_pred CcccCCHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccc
Q 036871 295 SIANFTSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTH 374 (383)
Q Consensus 295 S~~~~~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItH 374 (383)
|+...+.+++.+++++|++.++++||+++..... ++.. .+|+++.++. ++|+++++|+||.+||+|+++++||||
T Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~---~~~~-~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth 378 (482)
T 2pq6_A 304 STTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVI---GGSV-IFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTH 378 (482)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGST---TTGG-GSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEEC
T ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccc---cccc-cCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEec
Confidence 9988888889999999999999999999865311 1111 1677776664 578999999999999999999999999
Q ss_pred cccchhccC
Q 036871 375 CGWNSTIEA 383 (383)
Q Consensus 375 GG~~s~~Ea 383 (383)
||+||++||
T Consensus 379 ~G~~s~~Ea 387 (482)
T 2pq6_A 379 CGWNSTTES 387 (482)
T ss_dssp CCHHHHHHH
T ss_pred CCcchHHHH
Confidence 999999996
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4e-44 Score=336.16 Aligned_cols=345 Identities=26% Similarity=0.414 Sum_probs=239.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCc-cchhhHhhhhhcCCCcceEeeeCCCccCCCCCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGP-YVSKSVERANEMGIELDVKTIKFPSVEAGLPEGC 82 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 82 (383)
+++||+++|+|++||++||+.||++|++| ||+||+++++...+ .+.+........+.+++|+.++... ++. .
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~~~-~ 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVE----PPP-Q 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCC----CCC-G
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCC----CCc-c
Confidence 46799999999999999999999999999 99999999987532 2222221111112478888886321 221 1
Q ss_pred ccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhc---CCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhh
Q 036871 83 ENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRD---HKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNC 159 (383)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~ 159 (383)
+.. ... ... +........+.+++++++ .++||||+|.++.|+..+|+++|||++.+++++......+++
T Consensus 83 ~~~---~~~---~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 154 (463)
T 2acv_A 83 ELL---KSP---EFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLS 154 (463)
T ss_dssp GGG---GSH---HHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHH
T ss_pred ccc---CCc---cHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHH
Confidence 101 111 222 444445556677777766 689999999998999999999999999999998876665555
Q ss_pred hhhhCCCCCCCCCCC---CcccCCC-CCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcchHHH
Q 036871 160 LALYEPHKNVSSDSE---PFVMPHF-PGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYA 235 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~---~~~~P~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 235 (383)
.+.......+..... +..+|++ +. +..++++... ... ..+...+.......++..++++|+++++++...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 155 LKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDAC--FNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp GGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHH--HCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred HHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhh--cCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 543221111111122 3456776 33 3334444331 111 112223333445566788899999999998887
Q ss_pred HHHHHhc--CCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcc-cCCHhhHHHHHHHHH
Q 036871 236 DHYRKAL--GRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIA-NFTSAQLMEIATGLE 312 (383)
Q Consensus 236 ~~~~~~~--~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~a~~ 312 (383)
+.+.... ++++++|||+........ ....|.++.++.+|++..+++++|||||||+. ..+.+++.+++++|+
T Consensus 229 ~~l~~~~~p~~~v~~vGpl~~~~~~~~-----~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~ 303 (463)
T 2acv_A 229 DALYDHDEKIPPIYAVGPLLDLKGQPN-----PKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLK 303 (463)
T ss_dssp HHHHHHCTTSCCEEECCCCCCSSCCCB-----TTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHH
T ss_pred HHHHhccccCCcEEEeCCCcccccccc-----cccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHH
Confidence 7766544 578999999975431000 00012356789999998877899999999999 888888999999999
Q ss_pred hCCCcEEEEEecCCCCCCchhhhccCchhHHHhhC-CCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 313 ASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMK-GKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 313 ~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+.+++|||+++.+.. .+|+++.++.. ++|+++++|+||.++|+|+++++||||||+||++||
T Consensus 304 ~~~~~~l~~~~~~~~---------~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Ea 366 (463)
T 2acv_A 304 HSGVRFLWSNSAEKK---------VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILES 366 (463)
T ss_dssp HHTCEEEEECCCCGG---------GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred hCCCcEEEEECCCcc---------cCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHH
Confidence 999999999986411 16667665541 457888899999999999999999999999999996
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.6e-43 Score=331.15 Aligned_cols=349 Identities=29% Similarity=0.452 Sum_probs=229.8
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeE--EEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKA--SVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGL 78 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~V--t~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 78 (383)
|...++++||+++|+|++||++||+.||++|++|||+| |+++++.....+.+.... ....+++++.++. ++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~-----gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISD-----GV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCC-----CC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCC-----CC
Confidence 66666788999999999999999999999999997664 777765322211111000 0013677777642 34
Q ss_pred CCCCccccccchhhhHHHHHHHHHHHH-HhHHHHHHHhhc--CCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHH
Q 036871 79 PEGCENLDAITNEVNKELIVKFVGATT-KLQEPLEQLLRD--HKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLC 155 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~--~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~ 155 (383)
+++.+... ... ..+..+...+. .+.+.+.+++++ .++||||+|.++.|+..+|+++|||.|.++++++....
T Consensus 74 p~~~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 148 (456)
T 2c1x_A 74 PEGYVFAG--RPQ---EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLS 148 (456)
T ss_dssp CTTCCCCC--CTT---HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHH
T ss_pred CCcccccC--ChH---HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHH
Confidence 44332111 111 33333433332 233334444333 68999999999999999999999999999999776554
Q ss_pred HHhhhhh---h-CCCCCCC-CCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhc
Q 036871 156 ASNCLAL---Y-EPHKNVS-SDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYEL 230 (383)
Q Consensus 156 ~~~~~~~---~-~~~~~~~-~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (383)
.+.+.+. . ....... ......++|+++. ++.++++.....-.....+..++.+......+++++++|+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~l 225 (456)
T 2c1x_A 149 THVYIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEEL 225 (456)
T ss_dssp HHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGG
T ss_pred HHhhhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHH
Confidence 4332211 0 1000001 1112235677764 44455554311001112344555666666677889999999999
Q ss_pred chHHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHH
Q 036871 231 EPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATG 310 (383)
Q Consensus 231 ~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a 310 (383)
+++.++.+++.+ +++++|||++...... .+..+.++.+|++..+++++|||||||+...+.+++.+++++
T Consensus 226 e~~~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 295 (456)
T 2c1x_A 226 DDSLTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEA 295 (456)
T ss_dssp CHHHHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH
T ss_pred hHHHHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHH
Confidence 998888877666 6899999987542210 011245688999987678999999999998888889999999
Q ss_pred HHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 311 LEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 311 ~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
|++.++++||+++..... .+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||
T Consensus 296 l~~~~~~~lw~~~~~~~~--------~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Ea 359 (456)
T 2c1x_A 296 LEASRVPFIWSLRDKARV--------HLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWES 359 (456)
T ss_dssp HHHHTCCEEEECCGGGGG--------GSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred HHhcCCeEEEEECCcchh--------hCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHH
Confidence 999999999999765321 2777776653 568999999999999999999999999999999996
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-32 Score=256.83 Aligned_cols=318 Identities=18% Similarity=0.195 Sum_probs=198.5
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
++|+||++++.++.||++|++.||++|++|||+|++++++.+.+.+++. +++++.++.. ++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccc
Confidence 4678999999999999999999999999999999999998776555544 7777776532 1111110
Q ss_pred cc--ccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhh-
Q 036871 85 LD--AITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLA- 161 (383)
Q Consensus 85 ~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~- 161 (383)
.. ..... ..+..+......+.+.+.+.+++.++|+||+|.+..++..+|+++|||++.+++.+.... .+....
T Consensus 76 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~-~~~~~~~ 151 (424)
T 2iya_A 76 EESWPEDQE---SAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE-GFEEDVP 151 (424)
T ss_dssp TCCCCSSHH---HHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT-THHHHSG
T ss_pred hhhcchhHH---HHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc-ccccccc
Confidence 00 00111 233444445556677888889999999999999888999999999999999987653111 000000
Q ss_pred hhCCCCCCCCCCCCcccC-CCCCCcccCCCCCCccccccCCChhHHHHHHHH------hhhcccccEEEEcchhhcchHH
Q 036871 162 LYEPHKNVSSDSEPFVMP-HFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAI------DDSDLRSYGVAVNSFYELEPAY 234 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~~~P-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~ 234 (383)
.... ..... ..+...| +........ ...+.+ ..+. ..+..+..+. .......+.++.++...++++
T Consensus 152 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~- 224 (424)
T 2iya_A 152 AVQD-PTADR-GEEAAAPAGTGDAEEGA-EAEDGL-VRFF--TRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK- 224 (424)
T ss_dssp GGSC-CCC-----------------------HHHH-HHHH--HHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-
T ss_pred cccc-ccccc-ccccccccccccchhhh-ccchhH-HHHH--HHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-
Confidence 0000 00000 0000000 000000000 000000 0000 0111111111 011113556788888877754
Q ss_pred HHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhC
Q 036871 235 ADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEAS 314 (383)
Q Consensus 235 ~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~ 314 (383)
...+++++++|||+.... .+..+|++..+++++|||++||......+.+..+++++++.
T Consensus 225 ----~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~ 283 (424)
T 2iya_A 225 ----GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGL 283 (424)
T ss_dssp ----GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTC
T ss_pred ----ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcC
Confidence 145778899999975321 11336776554678999999999866678888999999988
Q ss_pred CCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 315 RRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 315 ~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+++++|.++.+... +.+. ..++|+++.+|+||.++|+|+++ ||||||+||++||
T Consensus 284 ~~~~~~~~g~~~~~---~~~~----------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea 337 (424)
T 2iya_A 284 DWHVVLSVGRFVDP---ADLG----------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEA 337 (424)
T ss_dssp SSEEEEECCTTSCG---GGGC----------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHH
T ss_pred CcEEEEEECCcCCh---HHhc----------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHH
Confidence 89999988765421 1111 13567999999999999999998 9999999999996
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.98 E-value=9.4e-32 Score=249.10 Aligned_cols=292 Identities=14% Similarity=0.132 Sum_probs=171.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCC--CCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAG--LPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~ 83 (383)
+.+||||+++|+.||++|+++||++|++|||+||+++++.+.+..+ .++.+..+........ .+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhccccccc
Confidence 5679999999999999999999999999999999999987654222 1555555432111000 000000
Q ss_pred cccccchh--hhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhh
Q 036871 84 NLDAITNE--VNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLA 161 (383)
Q Consensus 84 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~ 161 (383)
........ ........+..........+.+.+++.+||+||+|.+..++..+|+.+|||++.+...+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~----- 165 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG----- 165 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH-----
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc-----
Confidence 00000000 00011222333444556677788888999999999999999999999999998765432211000
Q ss_pred hhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcchHHHHHHH--
Q 036871 162 LYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYR-- 239 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 239 (383)
+. .. .. ..+.....+..-.............. +......
T Consensus 166 -------------------~~-----------~~---~~--~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 206 (400)
T 4amg_A 166 -------------------LG-----------AL---IR--RAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALLPE 206 (400)
T ss_dssp -------------------HH-----------HH---HH--HHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTSCG
T ss_pred -------------------hh-----------hH---HH--HHHHHHHHHhCCCcccccchhhcccC----chhhccCcc
Confidence 00 00 00 00011111111111111111111110 1010000
Q ss_pred HhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCC--HhhHHHHHHHHHhCCCc
Q 036871 240 KALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFT--SAQLMEIATGLEASRRN 317 (383)
Q Consensus 240 ~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~--~~~~~~~~~a~~~~~~~ 317 (383)
....+....+.+.... ....+.+|++..+++++|||||||+.... .+.+..+++++++.+.+
T Consensus 207 ~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~ 270 (400)
T 4amg_A 207 DRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAE 270 (400)
T ss_dssp GGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSE
T ss_pred cccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCce
Confidence 0001112222221111 12344568887778899999999997533 36688899999999999
Q ss_pred EEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 318 FIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 318 viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
++|..+..... . ... .++|+++.+|+||.++|+|+++ ||||||+||++||
T Consensus 271 ~v~~~~~~~~~----~-----~~~-----~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Ea 320 (400)
T 4amg_A 271 FVLTLGGGDLA----L-----LGE-----LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTA 320 (400)
T ss_dssp EEEECCTTCCC----C-----CCC-----CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHH
T ss_pred EEEEecCcccc----c-----ccc-----CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHH
Confidence 99998766532 1 111 4567999999999999999888 9999999999996
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=4.7e-30 Score=238.66 Aligned_cols=295 Identities=16% Similarity=0.145 Sum_probs=176.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDA 87 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
+||++++.++.||++|+++||++|++|||+|++++++.+.+.+.+. +++++.++.... .. ......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~--~~---~~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSAR--AP---IQRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHH--HH---hhcccc
Confidence 4899999999999999999999999999999999998754444433 788887764321 11 000000
Q ss_pred cchhhhHHHHHHHHHHHHHh-HHHHHHHhh-cCCCCEEEecC-CCch--HHHHHHHhCCCcEEEecchhhHHHHHhhhhh
Q 036871 88 ITNEVNKELIVKFVGATTKL-QEPLEQLLR-DHKPDCLVADI-FFPW--ATDAAAKFGIPRLVFHGTSFFSLCASNCLAL 162 (383)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~-~~~~D~vi~d~-~~~~--~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~ 162 (383)
... ..+ ...+... ...++++++ +.++|+||+|. +..| +..+|+++|||+|.+++.+....
T Consensus 67 -~~~---~~~---~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------- 131 (415)
T 1iir_A 67 -LTA---EDV---RRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------- 131 (415)
T ss_dssp -CCH---HHH---HHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------
T ss_pred -cch---HHH---HHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC--------
Confidence 000 111 1111111 222333332 57899999998 5668 89999999999999887753211
Q ss_pred hCCCCCCCCCCCCcccCCCCCCcccCCCCCCccc-cccCCChh---HHHHHHHHhhh------------cccccEEEEcc
Q 036871 163 YEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFV-KQDMGDND---FSRLLKAIDDS------------DLRSYGVAVNS 226 (383)
Q Consensus 163 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~-~~~~~~~~---~~~~~~~~~~~------------~~~~~~~~~~~ 226 (383)
..+.|.....+....+...+.. ..+..... +...+...... .... .++.|+
T Consensus 132 ------------~~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (415)
T 1iir_A 132 ------------SPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAA 198 (415)
T ss_dssp ------------CSSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECS
T ss_pred ------------CcccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEee
Confidence 0011110000000000000000 00000000 00001111100 1112 467777
Q ss_pred hhhcch-HHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHH
Q 036871 227 FYELEP-AYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLM 305 (383)
Q Consensus 227 ~~~l~~-~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~ 305 (383)
...+++ + +..+ ++++|||+...+. +.++.++.+|++.. +++|||++||+. ...+...
T Consensus 199 ~~~l~~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~ 256 (415)
T 1iir_A 199 DPVLAPLQ-----PTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVR 256 (415)
T ss_dssp CTTTSCCC-----CCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHH
T ss_pred ChhhcCCC-----cccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHH
Confidence 777664 2 1112 7899999865321 23567899999765 479999999997 5677788
Q ss_pred HHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 306 EIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 306 ~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.+++++++.+.+++|..+.+... . . ..++|+++.+|+||.++|+++++ ||||||+||+.||
T Consensus 257 ~~~~al~~~~~~~v~~~g~~~~~---------~-~-----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea 317 (415)
T 1iir_A 257 VAIDAIRAHGRRVILSRGWADLV---------L-P-----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVA 317 (415)
T ss_dssp HHHHHHHHTTCCEEECTTCTTCC---------C-S-----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCCccc---------c-c-----CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHH
Confidence 89999999999999987655321 1 0 12346999999999999977766 9999999999996
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.96 E-value=4.7e-29 Score=232.11 Aligned_cols=303 Identities=15% Similarity=0.129 Sum_probs=188.6
Q ss_pred CCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 4 KVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
+++|+||+|++.++.||++|++.||++|++|||+|++++++.+.+.++.. ++.+..++..... . ....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~--~-~~~~ 84 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIID--A-DAAE 84 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTT--C-CHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccc--c-ccch
Confidence 45789999999999999999999999999999999999987766555544 7777777532110 0 0000
Q ss_pred cccccchhhhHHHHHH-HHHHHHHhHHHHHHHhhcCCCCEEEec-CCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhh
Q 036871 84 NLDAITNEVNKELIVK-FVGATTKLQEPLEQLLRDHKPDCLVAD-IFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLA 161 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~D~vi~d-~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~ 161 (383)
........ ..+.. +..........+.+.+++.+||+||+| ....++..+|+++|||++.+.+......
T Consensus 85 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------- 154 (415)
T 3rsc_A 85 VFGSDDLG---VRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------- 154 (415)
T ss_dssp HHHSSSSC---HHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-------
T ss_pred hhccccHH---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-------
Confidence 00000011 22233 444445566788888999999999999 7777889999999999998774422100
Q ss_pred hhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCC-ChhHHHHHHHHh------hhcc-cccEEEEcchhhcchH
Q 036871 162 LYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMG-DNDFSRLLKAID------DSDL-RSYGVAVNSFYELEPA 233 (383)
Q Consensus 162 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~l~~~ 233 (383)
... ..+...+... ...+.. ... ...+........ .... ..+..+......++
T Consensus 155 ------~~~--~~~~~~~~~~-------~~~p~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-- 214 (415)
T 3rsc_A 155 ------HYS--FSQDMVTLAG-------TIDPLD---LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ-- 214 (415)
T ss_dssp ------SCC--HHHHHHHHHT-------CCCGGG---CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS--
T ss_pred ------ccc--cccccccccc-------cCChhh---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC--
Confidence 000 0000000000 000000 000 000111111110 0011 11334443333333
Q ss_pred HHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHh
Q 036871 234 YADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEA 313 (383)
Q Consensus 234 ~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~ 313 (383)
.....++.++.++||..... .+..+|....+++++|||++||......+.+..+++++++
T Consensus 215 ---~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 215 ---IAGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp ---TTGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred ---CCcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 22345677899999875431 2233565544467899999999987777788999999999
Q ss_pred CCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 314 SRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 314 ~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.+.+++|..+.+... +.+. ..++|+++.+|+||.++|+++++ ||||||+||+.||
T Consensus 275 ~~~~~v~~~g~~~~~---~~l~----------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 329 (415)
T 3rsc_A 275 QPWHVVMTLGGQVDP---AALG----------DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEA 329 (415)
T ss_dssp SSCEEEEECTTTSCG---GGGC----------CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHH
T ss_pred CCcEEEEEeCCCCCh---HHhc----------CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHH
Confidence 999999988765321 1111 13567999999999999999888 9999999999985
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.96 E-value=1.9e-28 Score=227.01 Aligned_cols=300 Identities=17% Similarity=0.162 Sum_probs=185.9
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+|+||++++.++.||++|++.||++|++|||+|++++++.+.+.++.. |+.+..++....... ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~---~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFH---VPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSS---SSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEeccccccccc---cccc
Confidence 4577999999999999999999999999999999999987655544443 777777753221100 0000
Q ss_pred ccccchhhhHHHHHH-HHHHHHHhHHHHHHHhhcCCCCEEEec-CCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhhh
Q 036871 85 LDAITNEVNKELIVK-FVGATTKLQEPLEQLLRDHKPDCLVAD-IFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLAL 162 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~D~vi~d-~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~ 162 (383)
....... ..+.. +..........+.+.+++.+||+||+| .+..++..+|+++|||+|.+.+......
T Consensus 70 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-------- 138 (402)
T 3ia7_A 70 VKQEDAE---TQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE-------- 138 (402)
T ss_dssp SCCTTHH---HHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT--------
T ss_pred ccccchH---HHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCc--------
Confidence 0111111 23333 444445556788888999999999999 7777889999999999998764322100
Q ss_pred hCCCCCCCCCCCCcccC--CCCCCcccCCCCCCccccccCC-ChhHHHHHHHHh------hhcccc-cEEEEcchhhcch
Q 036871 163 YEPHKNVSSDSEPFVMP--HFPGEIKLTRNQLPDFVKQDMG-DNDFSRLLKAID------DSDLRS-YGVAVNSFYELEP 232 (383)
Q Consensus 163 ~~~~~~~~~~~~~~~~P--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~l~~ 232 (383)
.+.+ .+.. ......+.. ... ...+........ ...... +..+......++
T Consensus 139 -------------~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~- 198 (402)
T 3ia7_A 139 -------------HYSLFKELWK---SNGQRHPAD---VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ- 198 (402)
T ss_dssp -------------TBCHHHHHHH---HHTCCCGGG---SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS-
T ss_pred -------------cccccccccc---cccccChhh---HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC-
Confidence 0000 0000 000000000 000 000111111000 000111 233333332332
Q ss_pred HHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHH
Q 036871 233 AYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLE 312 (383)
Q Consensus 233 ~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~ 312 (383)
.....++.++.++||..... .+..+|+...+++++|||++||......+.+..++++++
T Consensus 199 ----~~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 257 (402)
T 3ia7_A 199 ----PFAETFDERFAFVGPTLTGR-----------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFA 257 (402)
T ss_dssp ----TTGGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHT
T ss_pred ----CccccCCCCeEEeCCCCCCc-----------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHh
Confidence 22345677899999875431 223346544446789999999998777778899999999
Q ss_pred hCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 313 ASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 313 ~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+.+.+++|..+.+... +.+.. .++|+++..|+||.++|+++++ ||||||+||+.||
T Consensus 258 ~~~~~~~~~~g~~~~~---~~~~~----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 313 (402)
T 3ia7_A 258 DTPWHVVMAIGGFLDP---AVLGP----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEA 313 (402)
T ss_dssp TSSCEEEEECCTTSCG---GGGCS----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHH
T ss_pred cCCcEEEEEeCCcCCh---hhhCC----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHH
Confidence 9899999988765321 11111 3567999999999999999888 9999999999985
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.96 E-value=1.1e-28 Score=229.48 Aligned_cols=296 Identities=14% Similarity=0.064 Sum_probs=181.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDA 87 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
+||++++.++.||++|+++||++|++|||+|++++++.+.+.+... |++++.++..... .... . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~-~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHM-MLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGG-CCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHH-HHhh-c--ccc
Confidence 4899999999999999999999999999999999998755444444 7888877643111 1111 0 000
Q ss_pred cchhhhHHHHHHHH-HHHHHhHHHHHHHhhcCCCCEEEecC-CCch--HHHHHHHhCCCcEEEecchhhHHHHHhhhhhh
Q 036871 88 ITNEVNKELIVKFV-GATTKLQEPLEQLLRDHKPDCLVADI-FFPW--ATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 163 (383)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~D~vi~d~-~~~~--~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~~ 163 (383)
... ..+..+. .....+.+.+.+. ..+||+||+|. +..+ +..+|+.+|||++.+.+.+....
T Consensus 68 -~~~---~~~~~~~~~~~~~~~~~l~~~--~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------- 132 (416)
T 1rrv_A 68 -PPP---EEEQRLAAMTVEMQFDAVPGA--AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------- 132 (416)
T ss_dssp -CCH---HHHHHHHHHHHHHHHHHHHHH--TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------
T ss_pred -chh---HHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC---------
Confidence 000 1111111 1112222222221 56899999997 4557 88999999999998877653210
Q ss_pred CCCCCCCCCCCCcccC-CCCCCcccCCCCCCccc--cccC------CChhHHHHHHHH--------hhhcccccEEEEcc
Q 036871 164 EPHKNVSSDSEPFVMP-HFPGEIKLTRNQLPDFV--KQDM------GDNDFSRLLKAI--------DDSDLRSYGVAVNS 226 (383)
Q Consensus 164 ~~~~~~~~~~~~~~~P-~~~~~~~~~~~~l~~~~--~~~~------~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 226 (383)
..++| .+. +......+.+.. .+.. ....+..+.... .+..... .++.++
T Consensus 133 -----------~~~~p~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (416)
T 1rrv_A 133 -----------SPHLPPAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAA 198 (416)
T ss_dssp -----------CSSSCCCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECS
T ss_pred -----------CcccCCCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEcc
Confidence 00111 000 000000000000 0000 000011111110 0111222 567788
Q ss_pred hhhcchHHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCccc-CCHhhHH
Q 036871 227 FYELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIAN-FTSAQLM 305 (383)
Q Consensus 227 ~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~-~~~~~~~ 305 (383)
...++++. ..+ ++++|||+..... +.++.++.+|++.. +++|||++||+.. ...+.+.
T Consensus 199 ~~~l~~~~-----~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~ 257 (416)
T 1rrv_A 199 DPVLAPLQ-----PDV--DAVQTGAWLLSDE------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAK 257 (416)
T ss_dssp CTTTSCCC-----SSC--CCEECCCCCCCCC------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHH
T ss_pred CccccCCC-----CCC--CeeeECCCccCcc------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHH
Confidence 87776431 112 7899999865421 23568899999765 4799999999974 4567788
Q ss_pred HHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 306 EIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 306 ~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.+++++++.+.+++|..+..... . . ..++|+++.+|+||.++|+++++ ||||||+||++||
T Consensus 258 ~~~~al~~~~~~~v~~~g~~~~~---------~-~-----~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea 318 (416)
T 1rrv_A 258 VAVEAIRAQGRRVILSRGWTELV---------L-P-----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVA 318 (416)
T ss_dssp HHHHHHHHTTCCEEEECTTTTCC---------C-S-----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCcccc---------c-c-----CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHH
Confidence 88999999999999998765321 1 0 13557999999999999977777 9999999999996
No 12
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=4.5e-28 Score=226.49 Aligned_cols=305 Identities=19% Similarity=0.212 Sum_probs=184.1
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPE 80 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 80 (383)
|.+.|+|+||++++.++.||++|++.|+++|+++||+|+++++....+.+.+ .++++..++.. .+.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~-----~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHST-----LPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCC-----SCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCc-----Ccc
Confidence 6676778899999999999999999999999999999999998765433332 26777766432 111
Q ss_pred CCcccc--ccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHh
Q 036871 81 GCENLD--AITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASN 158 (383)
Q Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~ 158 (383)
...... ..... ..+..+...+......+.+.+++.+||+||+|.+..++..+|+.+|||+|.+++...... .+.
T Consensus 67 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-~~~ 142 (430)
T 2iyf_A 67 PDADPEAWGSTLL---DNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWK-GYE 142 (430)
T ss_dssp TTSCGGGGCSSHH---HHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCT-THH
T ss_pred ccccccccchhhH---HHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccc-ccc
Confidence 111000 00101 233333444555677788889999999999998877899999999999998876532100 000
Q ss_pred hhhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHH------hhhcccccEEEEcchhhcch
Q 036871 159 CLALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAI------DDSDLRSYGVAVNSFYELEP 232 (383)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~ 232 (383)
.... .+ +..+. ...+... .+. ..+.++..+. .......+.++.++...++.
T Consensus 143 ~~~~-----------~~-----~~~~~----~~~~~~~-~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (430)
T 2iyf_A 143 EEVA-----------EP-----MWREP----RQTERGR-AYY--ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQP 199 (430)
T ss_dssp HHTH-----------HH-----HHHHH----HHSHHHH-HHH--HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGST
T ss_pred cccc-----------cc-----hhhhh----ccchHHH-HHH--HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCC
Confidence 0000 00 00000 0000000 000 0011111110 00111346677887776664
Q ss_pred HHHHHHHHhcCCc-EEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHH
Q 036871 233 AYADHYRKALGRR-AWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGL 311 (383)
Q Consensus 233 ~~~~~~~~~~~~~-v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~ 311 (383)
. ...++++ ++++||...... +..+|.+..+++++||+++||+.....+.+..+++++
T Consensus 200 ~-----~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l 257 (430)
T 2iyf_A 200 H-----ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAF 257 (430)
T ss_dssp T-----GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHH
T ss_pred C-----cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHH
Confidence 3 1345667 999998643211 1124554444578999999999865677888899999
Q ss_pred HhC-CCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 312 EAS-RRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 312 ~~~-~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
++. +.+++|.++.+... +.+. ..++||++.+|+||.++|+++++ ||||||+||++||
T Consensus 258 ~~~~~~~~~~~~G~~~~~---~~l~----------~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea 315 (430)
T 2iyf_A 258 GNLPGWHLVLQIGRKVTP---AELG----------ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEG 315 (430)
T ss_dssp TTCTTEEEEEECC---CG---GGGC----------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHH
T ss_pred hcCCCeEEEEEeCCCCCh---HHhc----------cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHH
Confidence 886 78888888765421 1111 13567999999999999999998 9999999999996
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.96 E-value=1.6e-29 Score=234.10 Aligned_cols=286 Identities=14% Similarity=0.081 Sum_probs=179.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDA 87 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
+||+|++.++.||++|+++||++|++|||+|++++++.+.+.++.. ++.+..++..... . ... ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~--~-~~~-~~~~ 67 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRA--G-ARE-PGEL 67 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSG--G-GSC-TTCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHH--H-hcc-ccCC
Confidence 4899999999999999999999999999999999998766665554 7888877533211 1 000 0000
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchH---HHHHHHhCCCcEEEecchhhHHHHHhhhhhhC
Q 036871 88 ITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWA---TDAAAKFGIPRLVFHGTSFFSLCASNCLALYE 164 (383)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~---~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~~~ 164 (383)
.. .....+..........+.+.++ ++|+||+|..+..+ ..+|+++|||++.+..++......
T Consensus 68 ~~-----~~~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------- 132 (404)
T 3h4t_A 68 PP-----GAAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------- 132 (404)
T ss_dssp CT-----TCGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------
Confidence 00 1111122222333344444443 69999998765543 788999999999887765421100
Q ss_pred CCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhc--c---------cccEEEEcchhhcchH
Q 036871 165 PHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSD--L---------RSYGVAVNSFYELEPA 233 (383)
Q Consensus 165 ~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~l~~~ 233 (383)
.+. ..+..+... . . ..+...+....... . .....+.+....+.+.
T Consensus 133 ---------------~~~--~~~~~~~~~-~---~---~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~ 188 (404)
T 3h4t_A 133 ---------------QSQ--AERDMYNQG-A---D---RLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL 188 (404)
T ss_dssp ---------------SCH--HHHHHHHHH-H---H---HHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC
T ss_pred ---------------hHH--HHHHHHHHH-H---H---HHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC
Confidence 000 000000000 0 0 00001111110000 0 0111233444334322
Q ss_pred HHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHh
Q 036871 234 YADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEA 313 (383)
Q Consensus 234 ~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~ 313 (383)
++++++++.+|++..+. .+.+++++.+|++.. +++|||++||+.. ..+.+..+++++++
T Consensus 189 ------~~~~~~~~~~G~~~~~~------------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~ 247 (404)
T 3h4t_A 189 ------RPTDLGTVQTGAWILPD------------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRA 247 (404)
T ss_dssp ------CTTCCSCCBCCCCCCCC------------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHH
T ss_pred ------CCCCCCeEEeCccccCC------------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHh
Confidence 23556888899775432 133678899999754 6799999999987 77788999999999
Q ss_pred CCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 314 SRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 314 ~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.++++||+.+..... ..+ .++|+++.+|+||.++|+++++ ||||||+||+.||
T Consensus 248 ~~~~vv~~~g~~~~~---------~~~------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Ea 300 (404)
T 3h4t_A 248 QGRRVVLSSGWAGLG---------RID------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAV 300 (404)
T ss_dssp TTCCEEEECTTTTCC---------CSS------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred CCCEEEEEeCCcccc---------ccc------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHH
Confidence 999999998765421 111 3567999999999999988777 9999999999986
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.94 E-value=3.8e-27 Score=220.80 Aligned_cols=302 Identities=15% Similarity=0.093 Sum_probs=166.8
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCC-c
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGC-E 83 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~ 83 (383)
..|+||++++.++.||++|+++||++|++|||+|++++++.+.+.+... |++++.++......+..... .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhc
Confidence 3578999999999999999999999999999999999997765444433 78888775331000000000 0
Q ss_pred c-------cc-----cc-chhhhHHHHH----HHHHHHH-----H-hHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhC
Q 036871 84 N-------LD-----AI-TNEVNKELIV----KFVGATT-----K-LQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFG 140 (383)
Q Consensus 84 ~-------~~-----~~-~~~~~~~~~~----~~~~~~~-----~-~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~ 140 (383)
. .. .. ... ..+. .+...+. . ....+.+.+++.+||+||+|.+..++..+|+.+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTW---EHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSH---HHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHT
T ss_pred ccccccccccccccCcchhhh---hhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcC
Confidence 0 00 00 000 1111 1111111 1 4455666677889999999998788999999999
Q ss_pred CCcEEEecchhhHHHHHhhhhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhh-hcc--
Q 036871 141 IPRLVFHGTSFFSLCASNCLALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDD-SDL-- 217 (383)
Q Consensus 141 iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~-- 217 (383)
||+|.+...+............. ..+.|... .... + ...+..+...... ...
T Consensus 166 iP~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---------~~~~---~--~~~l~~~~~~~g~~~~~~~ 220 (441)
T 2yjn_A 166 TPHARLLWGPDITTRARQNFLGL-----------LPDQPEEH---------REDP---L--AEWLTWTLEKYGGPAFDEE 220 (441)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHH-----------GGGSCTTT---------CCCH---H--HHHHHHHHHHTTCCCCCGG
T ss_pred CCEEEEecCCCcchhhhhhhhhh-----------cccccccc---------ccch---H--HHHHHHHHHHcCCCCCCcc
Confidence 99998864432111000000000 00111000 0000 0 0001112221111 000
Q ss_pred --cccEEEEcchhhcchHHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCC
Q 036871 218 --RSYGVAVNSFYELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGS 295 (383)
Q Consensus 218 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS 295 (383)
.....+......++.+ ..++ . ..+++.. ...+.++.+|++..+++++|||++||
T Consensus 221 ~~~~~~~l~~~~~~~~~~------~~~~-~-~~~~~~~----------------~~~~~~~~~~l~~~~~~~~v~v~~Gs 276 (441)
T 2yjn_A 221 VVVGQWTIDPAPAAIRLD------TGLK-T-VGMRYVD----------------YNGPSVVPEWLHDEPERRRVCLTLGI 276 (441)
T ss_dssp GTSCSSEEECSCGGGSCC------CCCC-E-EECCCCC----------------CCSSCCCCGGGSSCCSSCEEEEEC--
T ss_pred ccCCCeEEEecCccccCC------CCCC-C-CceeeeC----------------CCCCcccchHhhcCCCCCEEEEECCC
Confidence 0112222222222210 0111 0 1122110 01234466888765567899999999
Q ss_pred cccC---CHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeec
Q 036871 296 IANF---TSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFV 372 (383)
Q Consensus 296 ~~~~---~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fI 372 (383)
+... ..+.+..+++++++.++++||..+..... . +. ..++|+++.+|+||.++|+++++ ||
T Consensus 277 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~----l~------~~~~~v~~~~~~~~~~ll~~ad~--~V 340 (441)
T 2yjn_A 277 SSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE----G----VA------NIPDNVRTVGFVPMHALLPTCAA--TV 340 (441)
T ss_dssp --------CCSTTTTHHHHHTSSSEEEECCCTTTTS----S----CS------SCCSSEEECCSCCHHHHGGGCSE--EE
T ss_pred CcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh----h----hc------cCCCCEEEecCCCHHHHHhhCCE--EE
Confidence 9763 44667788999999999999998754321 1 11 13567999999999999988877 99
Q ss_pred cccccchhccC
Q 036871 373 THCGWNSTIEA 383 (383)
Q Consensus 373 tHGG~~s~~Ea 383 (383)
||||.||+.||
T Consensus 341 ~~~G~~t~~Ea 351 (441)
T 2yjn_A 341 HHGGPGSWHTA 351 (441)
T ss_dssp ECCCHHHHHHH
T ss_pred ECCCHHHHHHH
Confidence 99999999986
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.93 E-value=5.5e-26 Score=209.18 Aligned_cols=283 Identities=16% Similarity=0.151 Sum_probs=172.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccC---CCCCCCcc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEA---GLPEGCEN 84 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~ 84 (383)
+||++++.++.||++|+++|+++|++|||+|++++++...+.+... ++++..++...... ........
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 4899999999999999999999999999999999987643333332 67777665321000 00000000
Q ss_pred ccccchhhhHHHH-HH-HHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhhhhh
Q 036871 85 LDAITNEVNKELI-VK-FVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNCLAL 162 (383)
Q Consensus 85 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~ 162 (383)
... ........+ .. +...+......+.+.+++.+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~---------- 140 (384)
T 2p6p_A 72 AIP-SDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD---------- 140 (384)
T ss_dssp CCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC----------
T ss_pred ccC-cchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc----------
Confidence 000 000000111 11 22233444667777788889999999988778889999999999876532100
Q ss_pred hCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhh-hcccccEEEEcchhhcchHHHHHHHHh
Q 036871 163 YEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDD-SDLRSYGVAVNSFYELEPAYADHYRKA 241 (383)
Q Consensus 163 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 241 (383)
. ..+. .. . ...+.++...... .......++.++...++.+ ..
T Consensus 141 ------------~---~~~~-----------~~---~--~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~ 183 (384)
T 2p6p_A 141 ------------A---DGIH-----------PG---A--DAELRPELSELGLERLPAPDLFIDICPPSLRPA------NA 183 (384)
T ss_dssp ------------C---TTTH-----------HH---H--HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TS
T ss_pred ------------c---chhh-----------HH---H--HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CC
Confidence 0 0000 00 0 0001122221110 0111456677776665532 11
Q ss_pred cC-CcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccC-----CHhhHHHHHHHHHhCC
Q 036871 242 LG-RRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANF-----TSAQLMEIATGLEASR 315 (383)
Q Consensus 242 ~~-~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~-----~~~~~~~~~~a~~~~~ 315 (383)
++ .++.+++. . .+.++.+|++..+++++|||++||.... +.+.+..+++++++.+
T Consensus 184 ~~~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~ 244 (384)
T 2p6p_A 184 APARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWD 244 (384)
T ss_dssp CCCEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTT
T ss_pred CCCCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCC
Confidence 21 12222311 0 1234556776544568999999999864 4577888999999999
Q ss_pred CcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 316 RNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 316 ~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.+++|+.+.... +.++ ..++|+++ +|+||.++|+++++ ||||||+||+.||
T Consensus 245 ~~~~~~~g~~~~------------~~l~--~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea 295 (384)
T 2p6p_A 245 VELIVAAPDTVA------------EALR--AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTG 295 (384)
T ss_dssp CEEEEECCHHHH------------HHHH--HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHH
T ss_pred cEEEEEeCCCCH------------HhhC--CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHH
Confidence 999998764311 1111 13678999 99999999988877 9999999999996
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.93 E-value=2.2e-25 Score=206.14 Aligned_cols=283 Identities=16% Similarity=0.158 Sum_probs=172.0
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCC----
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPE---- 80 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---- 80 (383)
++++||+|++.++.||++|++.|+++|++|||+|+++++ .+.+.+... |+.+..++..........
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAK 87 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhccc
Confidence 456799999999999999999999999999999999998 655444433 777777752210000000
Q ss_pred -C------C--ccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchh
Q 036871 81 -G------C--ENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSF 151 (383)
Q Consensus 81 -~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~ 151 (383)
. . ....... .....+......+...+.+.+++.+||+||+|....++..+|+.+|||+|.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 88 DNPRFAETVATRPAIDLE-----EWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HCHHHHHTGGGSCCCSGG-----GGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred CCccccccccCChhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 0 0 0000000 122233444455678888889999999999998888899999999999987553210
Q ss_pred hHHHHHhhhhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcc
Q 036871 152 FSLCASNCLALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELE 231 (383)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (383)
.. . .+.. ....+ +........-........+......+.
T Consensus 163 ~~---------------------~----~~~~-------~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 163 RT---------------------R----GMHR-------SIASF---------LTDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp CC---------------------T----THHH-------HHHTT---------CHHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred Cc---------------------c----chhh-------HHHHH---------HHHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 00 0 0000 00000 111111111111111222222211111
Q ss_pred hHHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccC--CHhhHHHHHH
Q 036871 232 PAYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANF--TSAQLMEIAT 309 (383)
Q Consensus 232 ~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~--~~~~~~~~~~ 309 (383)
.+ .......+.++ |. ..+.+..+|+...+++++|||++||.... ..+.+..+++
T Consensus 202 ~~-----~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 257 (398)
T 3oti_A 202 LE-----AEPEGWFMRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIA 257 (398)
T ss_dssp TT-----SCCCSBCCCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHH
T ss_pred CC-----CCCCCCCcccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHH
Confidence 10 00000001111 00 01233446766555678999999999753 6677889999
Q ss_pred HHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 310 GLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 310 a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
++++.+.+++|..++... +.+.. .++|+++..|+|+.++|+++++ ||||||.||+.||
T Consensus 258 ~l~~~~~~~v~~~g~~~~----~~l~~----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 315 (398)
T 3oti_A 258 AAGEVDADFVLALGDLDI----SPLGT----------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTA 315 (398)
T ss_dssp HHHTSSSEEEEECTTSCC----GGGCS----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHH
T ss_pred HHHcCCCEEEEEECCcCh----hhhcc----------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHH
Confidence 999999999999876542 22211 3567999999999999999888 9999999999996
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.92 E-value=9e-25 Score=202.01 Aligned_cols=290 Identities=13% Similarity=0.107 Sum_probs=162.5
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCC--C
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEG--C 82 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~ 82 (383)
+.++||+|++.++.||++|++.|+++|++|||+|++++++.+.+.+... ++.+..++.......+... .
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhcc
Confidence 4577999999999999999999999999999999999987655544443 7777777532110000000 0
Q ss_pred cccccc--chhh-hHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHHHHHhh
Q 036871 83 ENLDAI--TNEV-NKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSLCASNC 159 (383)
Q Consensus 83 ~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~~~~~~ 159 (383)
...... .... .......+......+...+.+.+++.+||+|++|....++..+|+.+|||+|.+..........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~--- 160 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI--- 160 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH---
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh---
Confidence 000000 0000 0011222333344556778888899999999999877889999999999998765432100000
Q ss_pred hhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhh-hcccccEEEEcchhhcchHHHHHH
Q 036871 160 LALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDD-SDLRSYGVAVNSFYELEPAYADHY 238 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 238 (383)
.. ....+ +.....+..- ........+......+...
T Consensus 161 ----------------------~~-------~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 197 (398)
T 4fzr_A 161 ----------------------KS-------AGVGE---------LAPELAELGLTDFPDPLLSIDVCPPSMEAQ----- 197 (398)
T ss_dssp ----------------------HH-------HHHHH---------THHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred ----------------------hH-------HHHHH---------HHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----
Confidence 00 00000 0011100000 0011122222222222211
Q ss_pred HHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccC--------CHhhHHHHHHH
Q 036871 239 RKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANF--------TSAQLMEIATG 310 (383)
Q Consensus 239 ~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~--------~~~~~~~~~~a 310 (383)
.......+.++++.. ...++.+|+...+++++|||++||.... ..+.+..++++
T Consensus 198 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a 259 (398)
T 4fzr_A 198 PKPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE 259 (398)
T ss_dssp --CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHH
T ss_pred CCCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH
Confidence 000001111221100 1223445655444578999999999743 45678889999
Q ss_pred HHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 311 LEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 311 ~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+++.+.+++|..+.... +.+. ..++|+++.+|+||.++|+++++ ||||||.||+.||
T Consensus 260 l~~~~~~~v~~~~~~~~----~~l~----------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea 316 (398)
T 4fzr_A 260 LPKLGFEVVVAVSDKLA----QTLQ----------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTC 316 (398)
T ss_dssp GGGGTCEEEECCCC----------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHH
T ss_pred HHhCCCEEEEEeCCcch----hhhc----------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHH
Confidence 99999999998766532 1111 13667999999999999999888 9999999999986
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.90 E-value=4.1e-23 Score=190.40 Aligned_cols=283 Identities=12% Similarity=0.100 Sum_probs=162.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEee-eCCCccCC-----CCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTI-KFPSVEAG-----LPEG 81 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~-----~~~~ 81 (383)
+||+|++.++.||++|+..|+++|++|||+|+++++....+.+... ++.+..+ +.+..... ....
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRFP 72 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCSC
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhccccc
Confidence 5999999999999999999999999999999999986544333333 6766666 32110000 0000
Q ss_pred CccccccchhhhHHHHHHHHHHHHHh-------HHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHH
Q 036871 82 CENLDAITNEVNKELIVKFVGATTKL-------QEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSL 154 (383)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~ 154 (383)
.......... .....+......+ ...+.+.+++.+||+|++|.....+..+|+.+|||++.+......
T Consensus 73 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~-- 147 (391)
T 3tsa_A 73 NPAFGQRDTE---AGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP-- 147 (391)
T ss_dssp CGGGGCTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC--
T ss_pred ccccccccch---hHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc--
Confidence 0000000001 1222222223333 677888889999999999987778888999999998886532110
Q ss_pred HHHhhhhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhh-cccccEEEEcchhhcchH
Q 036871 155 CASNCLALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDS-DLRSYGVAVNSFYELEPA 233 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 233 (383)
.. ...... . ...+.....+.... .......+......++..
T Consensus 148 ---------------------------~~------~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 148 ---------------------------TA------GPFSDR---A--HELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp ---------------------------TT------THHHHH---H--HHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred ---------------------------cc------ccccch---H--HHHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 00 000000 0 00011111111100 001122232222222110
Q ss_pred HHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCccc---CCHhhHHHHHHH
Q 036871 234 YADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIAN---FTSAQLMEIATG 310 (383)
Q Consensus 234 ~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~---~~~~~~~~~~~a 310 (383)
.......+.++ |.. .+....+|+...+++++|++++||... ...+.+..++++
T Consensus 190 -----~~~~~~~~~~~-p~~------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PYN------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp -----TSCCCEECCCC-CCC------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred -----CCCccCCeeee-cCC------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 00000111122 110 122344676655567899999999953 336778888888
Q ss_pred HHhC-CCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 311 LEAS-RRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 311 ~~~~-~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
++. +.+++|..++... +. +. ..++|+++.+|+|+.++|+++++ ||||||.||++||
T Consensus 246 -~~~p~~~~v~~~~~~~~----~~----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 302 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHR----AL----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTA 302 (391)
T ss_dssp -HTSTTEEEEEECCGGGG----GG----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHH
T ss_pred -ccCCCeEEEEEECCcch----hh----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHH
Confidence 888 7889998765432 11 21 13567999999999999988877 9999999999996
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.87 E-value=1.1e-20 Score=175.24 Aligned_cols=290 Identities=18% Similarity=0.231 Sum_probs=168.9
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCC------
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGL------ 78 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------ 78 (383)
..++||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .++.+..++.... .+.
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~-~~~~~~~~~ 87 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVF-DGFLAALRI 87 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHH-HHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccc-cchhhhhhh
Confidence 457799999999999999999999999999999999998754333332 2677776642000 000
Q ss_pred --CC-CCccccccchhhhHHHHHHHHHH-HHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecchhhHH
Q 036871 79 --PE-GCENLDAITNEVNKELIVKFVGA-TTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGTSFFSL 154 (383)
Q Consensus 79 --~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~~~~~~ 154 (383)
.. ........... ......+... .......+.+.+++.+||+|++|....++..+|+.+|||+|.........
T Consensus 88 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~- 164 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLS--ELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP- 164 (412)
T ss_dssp HHSCSCCTTCCHHHHT--TSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC-
T ss_pred hhcccCCccCChhHhh--HHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc-
Confidence 00 00000000000 0111222222 23345677888888999999999877778889999999988754321100
Q ss_pred HHHhhhhhhCCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhh------cccccEEEEcchh
Q 036871 155 CASNCLALYEPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDS------DLRSYGVAVNSFY 228 (383)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 228 (383)
++... .+.. .+.+...+..-. ....+.++..+..
T Consensus 165 ------------------------~~~~~-------~~~~---------~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 165 ------------------------DDLTR-------SIEE---------EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPP 204 (412)
T ss_dssp ------------------------SHHHH-------HHHH---------HHHHHHHHTTCCCCSSCCGGGGCCEEECSCG
T ss_pred ------------------------hhhhH-------HHHH---------HHHHHHHHcCCCCCcccccCCCCeEEeeCCH
Confidence 00000 0000 011111110000 1122333433333
Q ss_pred hcchHHHHHHHHhcCCcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhc-cCCCCCCcEEEEEeCCcccCCHhhHHHH
Q 036871 229 ELEPAYADHYRKALGRRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRW-LNSKQPNSVVYICFGSIANFTSAQLMEI 307 (383)
Q Consensus 229 ~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~vV~vs~GS~~~~~~~~~~~~ 307 (383)
..+.. ...+...-..+-+.... ...+..+| ....+++++|++++||......+.+..+
T Consensus 205 ~~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 205 SLQEP-----EFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp GGSCH-----HHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred HhcCC-----cccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 33211 11111111111111000 11223345 2222357799999999976667788889
Q ss_pred HHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 308 ATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 308 ~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
++++++.+.+++|..+..... +.+.. .++|+++..|+|+.++|+++++ ||+|||+||++||
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~---~~l~~----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea 324 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV---SGLGE----------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGA 324 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC---TTCCC----------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCCCCh---hhhcc----------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHH
Confidence 999998899999998776521 12111 3567999999999999999998 9999999999986
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.66 E-value=2.6e-15 Score=136.46 Aligned_cols=257 Identities=16% Similarity=0.122 Sum_probs=139.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc--cchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP--YVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENL 85 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 85 (383)
.||+|...++.||++|.++||++|.+|||+|+|+++..-.+ .+.+ .+++++.++.. ++...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~---------~g~~~~~i~~~----~~~~~---- 65 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK---------AGLPLHLIQVS----GLRGK---- 65 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG---------GTCCEEECC---------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh---------cCCcEEEEECC----CcCCC----
Confidence 38999998888999999999999999999999999765321 2222 26677766422 11110
Q ss_pred cccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCch--HHHHHHHhCCCcEEEecchhhHHHHHhhhhhh
Q 036871 86 DAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPW--ATDAAAKFGIPRLVFHGTSFFSLCASNCLALY 163 (383)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~--~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~~ 163 (383)
... ..+......... .......+++.+||+||++....+ +...|+.++||++..-.
T Consensus 66 ~~~------~~~~~~~~~~~~-~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~--------------- 123 (365)
T 3s2u_A 66 GLK------SLVKAPLELLKS-LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ--------------- 123 (365)
T ss_dssp -------------CHHHHHHH-HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC---------------
T ss_pred CHH------HHHHHHHHHHHH-HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec---------------
Confidence 000 111111111111 123446778899999999875553 55668889999885211
Q ss_pred CCCCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcchHHHHHHHHhcC
Q 036871 164 EPHKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRKALG 243 (383)
Q Consensus 164 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 243 (383)
..+|++.+ +++. +.+..+.. ++.+-. ...
T Consensus 124 ------------n~~~G~~n-----------------------r~l~------~~a~~v~~-~~~~~~---------~~~ 152 (365)
T 3s2u_A 124 ------------NAVAGTAN-----------------------RSLA------PIARRVCE-AFPDTF---------PAS 152 (365)
T ss_dssp ------------SSSCCHHH-----------------------HHHG------GGCSEEEE-SSTTSS---------CC-
T ss_pred ------------chhhhhHH-----------------------Hhhc------cccceeee-cccccc---------cCc
Confidence 01112111 1111 11222222 111110 011
Q ss_pred CcEEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhC----CCcEE
Q 036871 244 RRAWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEAS----RRNFI 319 (383)
Q Consensus 244 ~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~----~~~vi 319 (383)
.+...+|......... +......++ +.+++|+|..||.... ...+.+.++++.+ +..++
T Consensus 153 ~k~~~~g~pvr~~~~~-------------~~~~~~~~~--~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi 215 (365)
T 3s2u_A 153 DKRLTTGNPVRGELFL-------------DAHARAPLT--GRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIR 215 (365)
T ss_dssp --CEECCCCCCGGGCC-------------CTTSSCCCT--TSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEE
T ss_pred CcEEEECCCCchhhcc-------------chhhhcccC--CCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEE
Confidence 4456677433221100 000011122 2467899988987542 2334456777665 33566
Q ss_pred EEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHH-HhhcCCCceeeccccccchhccC
Q 036871 320 WVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQV-LILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 320 w~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~-~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
|..+.+.. +. +.+. .+..+.++.+..|+++. ++++.+++ +|||+|.+|+.|+
T Consensus 216 ~~~G~~~~----~~----~~~~--~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~ 268 (365)
T 3s2u_A 216 HQAGRQHA----EI----TAER--YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSEL 268 (365)
T ss_dssp EECCTTTH----HH----HHHH--HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHH
T ss_pred EecCcccc----cc----ccce--ecccccccccccchhhhhhhhccceE--EEecCCcchHHHH
Confidence 66544321 11 1111 11245678899999975 69999998 9999999999985
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.56 E-value=6.4e-15 Score=118.96 Aligned_cols=97 Identities=30% Similarity=0.419 Sum_probs=80.6
Q ss_pred CcChhhHhhccCCCCCCcEEEEEeCCcc-cCCHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCC
Q 036871 270 SIDEQECLRWLNSKQPNSVVYICFGSIA-NFTSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKG 348 (383)
Q Consensus 270 ~~~~~~~~~~l~~~~~~~vV~vs~GS~~-~~~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 348 (383)
+.+++++.+|++..+++++|||++||.. ..+.+.+..+++++++.+.+++|..+..... . .+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~------------~-----~~ 67 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD------------T-----LG 67 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT------------T-----CC
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc------------c-----CC
Confidence 3478999999987656789999999996 4567788889999998899999998654321 1 24
Q ss_pred CCeEecCcccHHHhhcCCCceeeccccccchhccC
Q 036871 349 KGLIIRGWAPQVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 349 ~nv~~~~~~Pq~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+|+++.+|+||.++|.|+++++||||||+||+.||
T Consensus 68 ~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea 102 (170)
T 2o6l_A 68 LNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEA 102 (170)
T ss_dssp TTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHH
T ss_pred CcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHH
Confidence 56999999999999988888889999999999986
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.18 E-value=7.9e-10 Score=100.25 Aligned_cols=259 Identities=12% Similarity=0.066 Sum_probs=140.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDA 87 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
+||++++.+..||..+...|+++|+++||+|++++...... ..... ..++++..++... ....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~~----~~~~------ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRISG----LRGK------ 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCCC----CTTC------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCCc----cCcC------
Confidence 69999998888999999999999999999999999865321 11100 1256666554221 1100
Q ss_pred cchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHhCCCcEEEecchhhHHHHHhhhhhhCC
Q 036871 88 ITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP--WATDAAAKFGIPRLVFHGTSFFSLCASNCLALYEP 165 (383)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~~~~~~~~~~~~~~~~~~~~ 165 (383)
... ..+...... ......+.+.+++.+||+|+++.... .+..+++.+++|+|......
T Consensus 70 -~~~---~~~~~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------- 129 (364)
T 1f0k_A 70 -GIK---ALIAAPLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------- 129 (364)
T ss_dssp -CHH---HHHTCHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------
T ss_pred -ccH---HHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC---------------
Confidence 000 111100111 11234566677888999999986432 35667788899988532110
Q ss_pred CCCCCCCCCCcccCCCCCCcccCCCCCCccccccCCChhHHHHHHHHhhhcccccEEEEcchhhcchHHHHHHHHhcCCc
Q 036871 166 HKNVSSDSEPFVMPHFPGEIKLTRNQLPDFVKQDMGDNDFSRLLKAIDDSDLRSYGVAVNSFYELEPAYADHYRKALGRR 245 (383)
Q Consensus 166 ~~~~~~~~~~~~~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 245 (383)
.|+ . ..++ ..+.++.++..+... + ++
T Consensus 130 ------------~~~--------------~---------~~~~------~~~~~d~v~~~~~~~------------~-~~ 155 (364)
T 1f0k_A 130 ------------IAG--------------L---------TNKW------LAKIATKVMQAFPGA------------F-PN 155 (364)
T ss_dssp ------------SCC--------------H---------HHHH------HTTTCSEEEESSTTS------------S-SS
T ss_pred ------------CCc--------------H---------HHHH------HHHhCCEEEecChhh------------c-CC
Confidence 000 0 0010 111234444432211 2 24
Q ss_pred EEEeCcCCCCCCCccchhccCCCCCcChhhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhC--CCcEEEEEe
Q 036871 246 AWHIGPVSLCNRNFEDKALWGKQASIDEQECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEAS--RRNFIWVVR 323 (383)
Q Consensus 246 v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~--~~~viw~~~ 323 (383)
+..+|.-..... .. .+..-..+ ...+++++|++..|+... .+....+++|++.+ +.++++..+
T Consensus 156 ~~~i~n~v~~~~-------~~-----~~~~~~~~-~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G 220 (364)
T 1f0k_A 156 AEVVGNPVRTDV-------LA-----LPLPQQRL-AGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSG 220 (364)
T ss_dssp CEECCCCCCHHH-------HT-----SCCHHHHH-TTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECC
T ss_pred ceEeCCccchhh-------cc-----cchhhhhc-ccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 556664221100 00 00001122 112235678888888743 34445556777665 355566655
Q ss_pred cCCCCCCchhhhccCchhHHHhhCCCCeEecCccc-HHHhhcCCCceeeccccccchhccC
Q 036871 324 RNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAP-QVLILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 324 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~P-q~~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
.+.. +.+. +..+ +..-+||++..|++ -.+++..+++ ||+++|.+++.||
T Consensus 221 ~~~~----~~l~----~~~~-~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EA 270 (364)
T 1f0k_A 221 KGSQ----QSVE----QAYA-EAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEI 270 (364)
T ss_dssp TTCH----HHHH----HHHH-HTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHH
T ss_pred CchH----HHHH----HHHh-hcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHH
Confidence 5431 1111 1111 11225799999994 4779999999 9999998888886
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=98.42 E-value=3.2e-07 Score=75.98 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=57.8
Q ss_pred CCcEEEEEeCCcccCCHhhHHH-----HHHHHHhCC-CcEEEEEecCCCCCCchhhhcc--------CchhH------HH
Q 036871 285 PNSVVYICFGSIANFTSAQLME-----IATGLEASR-RNFIWVVRRNKNDGGEEEKEAW--------LPEGF------EK 344 (383)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~-----~~~a~~~~~-~~viw~~~~~~~~~~~~~~~~~--------lp~~~------~~ 344 (383)
++++|||+.||.... .+.+.. +++++.+.+ .+++|.++.......++-.... +|.+. ++
T Consensus 27 ~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 105 (224)
T 2jzc_A 27 EEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTAR 105 (224)
T ss_dssp CSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSCE
T ss_pred CCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccccccc
Confidence 467999999998422 222232 348888777 7899998876531000000000 01000 00
Q ss_pred ----hhCCCCeEecCcccHH-Hhhc-CCCceeeccccccchhccC
Q 036871 345 ----RMKGKGLIIRGWAPQV-LILD-HEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 345 ----~~~~~nv~~~~~~Pq~-~lL~-~~~~~~fItHGG~~s~~Ea 383 (383)
....-++.+.+|+++. ++|+ .+++ +|||||.||+.|+
T Consensus 106 ~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Ea 148 (224)
T 2jzc_A 106 QYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDS 148 (224)
T ss_dssp EEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHH
T ss_pred ccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHH
Confidence 0001245677888775 7999 9999 9999999999985
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.40 E-value=2e-05 Score=68.03 Aligned_cols=82 Identities=11% Similarity=0.130 Sum_probs=55.6
Q ss_pred CcEEEEEeCCcccCCHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhh-CCCCeEecCcccHH-Hhh
Q 036871 286 NSVVYICFGSIANFTSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRM-KGKGLIIRGWAPQV-LIL 363 (383)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~~Pq~-~lL 363 (383)
.+.|+|++|.... ......+++++.+.. ++.+..+.+.. ..+.+++.. ..+|+.+..++++. +++
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~----------~~~~l~~~~~~~~~v~v~~~~~~m~~~m 223 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP----------NLKKLQKFAKLHNNIRLFIDHENIAKLM 223 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT----------THHHHHHHHHTCSSEEEEESCSCHHHHH
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch----------HHHHHHHHHhhCCCEEEEeCHHHHHHHH
Confidence 5689999997632 234556778876644 56666665543 222333322 23589999999877 589
Q ss_pred cCCCceeeccccccchhccC
Q 036871 364 DHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 364 ~~~~~~~fItHGG~~s~~Ea 383 (383)
..+++ +|++|| +|+.|+
T Consensus 224 ~~aDl--vI~~gG-~T~~E~ 240 (282)
T 3hbm_A 224 NESNK--LIISAS-SLVNEA 240 (282)
T ss_dssp HTEEE--EEEESS-HHHHHH
T ss_pred HHCCE--EEECCc-HHHHHH
Confidence 88888 999999 799884
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.17 E-value=0.00025 Score=64.40 Aligned_cols=108 Identities=9% Similarity=0.074 Sum_probs=66.8
Q ss_pred CCCcEEEEEcC--C--CcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCC
Q 036871 5 VPQLHVFFFPF--M--AHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPE 80 (383)
Q Consensus 5 ~~~~~il~~~~--~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 80 (383)
++|+||++++. + ..|.-.-+..++++| +||+|++++............ ...++.+..++...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------- 67 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSV------- 67 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSS-------
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccccc-------
Confidence 45779999875 3 468888899999999 799999999866432111110 12355555553210
Q ss_pred CCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHhCCCcEEE
Q 036871 81 GCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP--WATDAAAKFGIPRLVF 146 (383)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~ 146 (383)
.... . .....+.+.+++.++|+|++..... ....+++.+++|.+++
T Consensus 68 ------~~~~----~----------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 68 ------MLPT----P----------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp ------CCSC----H----------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ------cccc----h----------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 0000 0 1234566777888999999765443 3556678899995553
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.06 E-value=0.0035 Score=57.58 Aligned_cols=133 Identities=19% Similarity=0.133 Sum_probs=70.9
Q ss_pred CCcEEEEEcCC-----CcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchh---------h--HhhhhhcCCCcceEee
Q 036871 6 PQLHVFFFPFM-----AHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSK---------S--VERANEMGIELDVKTI 69 (383)
Q Consensus 6 ~~~~il~~~~~-----~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~---------~--~~~~~~~~~~v~~~~~ 69 (383)
+++||++++.. ..|--.-+..|+++|+++||+|+++++......-.. . .........++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35699998843 345566689999999999999999996433211000 0 0000000125555555
Q ss_pred eCCCccCCCCCCCccccccc-hhhhHHH-HHHHHHHHHHhHHHHHHHhh-cCCCCEEEecCCCc--hHHHHHHHhCCCcE
Q 036871 70 KFPSVEAGLPEGCENLDAIT-NEVNKEL-IVKFVGATTKLQEPLEQLLR-DHKPDCLVADIFFP--WATDAAAKFGIPRL 144 (383)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~l~-~~~~D~vi~d~~~~--~~~~ia~~l~iP~v 144 (383)
+. ... ....... .. +. ...+..........+...++ +.++|+|.+..... .+..+++..++|+|
T Consensus 81 ~~-~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v 149 (439)
T 3fro_A 81 GG-GLL-------DSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAV 149 (439)
T ss_dssp ES-GGG-------GCSSTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEE
T ss_pred cc-hhc-------cccccccCCc---chhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEE
Confidence 42 100 0000000 00 11 22333333334444444443 57999999876444 25566678899988
Q ss_pred EEecc
Q 036871 145 VFHGT 149 (383)
Q Consensus 145 ~~~~~ 149 (383)
.....
T Consensus 150 ~~~h~ 154 (439)
T 3fro_A 150 FTIHR 154 (439)
T ss_dssp EEESC
T ss_pred EEecc
Confidence 76543
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.05 E-value=0.00013 Score=66.07 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCCCCccchhhHhhhhhcCCCcce-EeeeCCCccCCCCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPANGPYVSKSVERANEMGIELDV-KTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~ 83 (383)
.|+||++++.. .+.......|+++|.++ ||+|.++++............ ..++.+ ..++ ... .
T Consensus 4 ~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~--~ 68 (376)
T 1v4v_A 4 GMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDRNLD-------VMQ--E 68 (376)
T ss_dssp CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSEECC-------CCS--S
T ss_pred CceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-----HcCCCcccccc-------cCC--C
Confidence 35799998854 33445567889999998 899887765432221111111 123322 1221 100 0
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCC--Cc-hHHHHHHHhCCCcEE
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIF--FP-WATDAAAKFGIPRLV 145 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~--~~-~~~~ia~~l~iP~v~ 145 (383)
.. .....+. .....+.+.+++.+||+|++... .. .+..+|+.+++|++.
T Consensus 69 ---~~------~~~~~~~----~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~ 120 (376)
T 1v4v_A 69 ---RQ------ALPDLAA----RILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH 120 (376)
T ss_dssp ---CC------CHHHHHH----HHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE
T ss_pred ---Cc------cHHHHHH----HHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEE
Confidence 00 1001111 12245667788889999998432 22 346678889999764
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.99 E-value=0.0013 Score=60.61 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=33.4
Q ss_pred CCCcEEEEEcC-----------CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPF-----------MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~-----------~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.+|+||++++. ...|+-..+..|+++|+++||+|++++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 69 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRAT 69 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCC
Confidence 46889999985 235888889999999999999999999754
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=97.96 E-value=0.00021 Score=64.72 Aligned_cols=111 Identities=16% Similarity=0.124 Sum_probs=60.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCCCCccchhhHhhhhhcCCCcce-EeeeCCCccCCCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGV-KASVITTPANGPYVSKSVERANEMGIELDV-KTIKFPSVEAGLPEGCENL 85 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH-~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~ 85 (383)
+||++++. ..++...+..|+++|.++|+ +|.++.+............. .++.+ ..++. ...
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~---- 63 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL-----FSIVPDYDLNI-------MQP---- 63 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHH-----HTCCCSEECCC-------CST----
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHH-----cCCCCCcceec-------CCC----
Confidence 47888764 45777888999999999995 88765543322211111110 13322 22211 100
Q ss_pred cccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCC--Cc-hHHHHHHHhCCCcEEE
Q 036871 86 DAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIF--FP-WATDAAAKFGIPRLVF 146 (383)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~--~~-~~~~ia~~l~iP~v~~ 146 (383)
.. ..... .......+.+.+++.+||+|++... .. .+..+++.+++|++..
T Consensus 64 -~~------~~~~~----~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 116 (384)
T 1vgv_A 64 -GQ------GLTEI----TCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHV 116 (384)
T ss_dssp -TS------CHHHH----HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEE
T ss_pred -Cc------cHHHH----HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 00 11110 1112345667778889999997532 22 3455677889998764
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.91 E-value=0.0018 Score=58.85 Aligned_cols=113 Identities=10% Similarity=0.060 Sum_probs=63.2
Q ss_pred CCcEEEEEcCC---C-cccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCC
Q 036871 6 PQLHVFFFPFM---A-HGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEG 81 (383)
Q Consensus 6 ~~~~il~~~~~---~-~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 81 (383)
+|+||+++... . .|.-.-+..++++|.++||+|++++............. ..+ ++..++.. ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-----~~~-~~~~~~~~-------~~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV-----SGG-KAVPIPYN-------GS 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE-----ECC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc-----cCC-cEEecccc-------CC
Confidence 57799998843 2 56668899999999999999999998654321111000 001 11111100 00
Q ss_pred CccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHhCCCcEEEe
Q 036871 82 CENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP--WATDAAAKFGIPRLVFH 147 (383)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~~ 147 (383)
...... . ......+.+.+++.++|+|++..... .+..+++..++|+|...
T Consensus 86 ---~~~~~~----~---------~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~ 137 (406)
T 2gek_A 86 ---VARLRF----G---------PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATF 137 (406)
T ss_dssp --------C----C---------HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEE
T ss_pred ---cccccc----c---------HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEE
Confidence 000000 0 01224566667778999999776544 34556677799988754
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.84 E-value=0.0013 Score=59.93 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
++|+||++++ ++.+...=+..|.++|.++ |+++.++.+..-.+....... ..+++. .+.+ .+....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-----~~~i~~-~~~l-----~~~~~~- 89 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-----LFSITP-DFDL-----NIMEPG- 89 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-----HTTCCC-SEEC-----CCCCTT-
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-----hcCCCC-ceee-----ecCCCC-
Confidence 4577888776 5555666689999999998 788876655443221111111 012210 0100 010000
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecC-CCc--hHHHHHHHhCCCcEEE
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADI-FFP--WATDAAAKFGIPRLVF 146 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~-~~~--~~~~ia~~l~iP~v~~ 146 (383)
. + ... ........+.+.+++.+||+|++-. ... .+...|..++||.+.+
T Consensus 90 --~--~------~~~----~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 90 --Q--T------LNG----VTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp --C--C------HHH----HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred --C--C------HHH----HHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 0 0 001 1222355677788888999998633 222 3466788899997753
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.82 E-value=0.00013 Score=65.09 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCC----------------CcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFM----------------AHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~----------------~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|+++||+++... ..|.-.-...++++|.++||+|++++...
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 345799998865 25677789999999999999999999864
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.70 E-value=0.00097 Score=60.90 Aligned_cols=115 Identities=10% Similarity=0.102 Sum_probs=60.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGC 82 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 82 (383)
|+|+||++++... +...=+..|.++|.++ |+++.++.+..-.+....... ..++.. .+.. .+....
T Consensus 25 m~~~kI~~v~Gtr-~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-----~~~i~~-~~~l-----~v~~~~ 92 (403)
T 3ot5_A 25 MAKIKVMSIFGTR-PEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-----IFDIKP-DIDL-----DIMKKG 92 (403)
T ss_dssp -CCEEEEEEECSH-HHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-----HTTCCC-SEEC-----CCCC-C
T ss_pred cccceEEEEEecC-hhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-----hcCCCC-Cccc-----ccCCCC
Confidence 4567888877554 4455579999999998 688776655432221111111 112211 0100 111000
Q ss_pred ccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecC-C-Cc-hHHHHHHHhCCCcEEE
Q 036871 83 ENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADI-F-FP-WATDAAAKFGIPRLVF 146 (383)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~-~-~~-~~~~ia~~l~iP~v~~ 146 (383)
+ . . ..........+.+.+++.+||+|++-. . .. .+...|..++||.+.+
T Consensus 93 ~---~--------~----~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 93 Q---T--------L----AEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp C---C--------H----HHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred C---C--------H----HHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 0 0 0 011222355677788889999998633 2 22 3567888999997754
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.46 E-value=0.047 Score=49.25 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=31.7
Q ss_pred CcEEEEEcCCC-cccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMA-HGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~-~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++++....+|. .|.-.-...|+++|+++||+|++++...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 56778777774 4677778899999999999999999753
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.37 E-value=0.0044 Score=56.61 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 5 VPQLHVFFFPFM--AHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 5 ~~~~~il~~~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
++++||+++... ..|+-..+..|+++|+++||+|++++....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 456799977665 357888899999999999999999887543
No 36
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.24 E-value=0.0014 Score=61.72 Aligned_cols=131 Identities=12% Similarity=0.084 Sum_probs=68.5
Q ss_pred CCCCCCCcEEEEEcCC---------------CcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhc--CCC
Q 036871 1 MGSKVPQLHVFFFPFM---------------AHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEM--GIE 63 (383)
Q Consensus 1 m~~~~~~~~il~~~~~---------------~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~--~~~ 63 (383)
|..+++++||++++.. ..|.-..+..|+++|+++||+|++++.................. ..+
T Consensus 1 m~~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~g 80 (499)
T 2r60_A 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNK 80 (499)
T ss_dssp ------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSS
T ss_pred CccccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCC
Confidence 5565566899999852 45777889999999999999999998654321100000000000 125
Q ss_pred cceEeeeCCCccCCCCCCCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhc--CCCCEEEecCCCc--hHHHHHHHh
Q 036871 64 LDVKTIKFPSVEAGLPEGCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRD--HKPDCLVADIFFP--WATDAAAKF 139 (383)
Q Consensus 64 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~D~vi~d~~~~--~~~~ia~~l 139 (383)
+++..++.... ........ . ..+.. ....+...+++ .++|+|.+..... .+..+++.+
T Consensus 81 v~v~~~~~~~~------~~~~~~~~--~---~~~~~-------~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~ 142 (499)
T 2r60_A 81 VRIVRIPFGGD------KFLPKEEL--W---PYLHE-------YVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIK 142 (499)
T ss_dssp EEEEEECCSCS------SCCCGGGC--G---GGHHH-------HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCc------CCcCHHHH--H---HHHHH-------HHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhc
Confidence 66666542210 00000000 0 11111 12234455555 5899999875432 244567788
Q ss_pred CCCcEEEecc
Q 036871 140 GIPRLVFHGT 149 (383)
Q Consensus 140 ~iP~v~~~~~ 149 (383)
++|+|.....
T Consensus 143 ~~p~v~~~H~ 152 (499)
T 2r60_A 143 GLPFTFTGHS 152 (499)
T ss_dssp CCCEEEECSS
T ss_pred CCcEEEEccC
Confidence 9998865443
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=96.77 E-value=0.026 Score=50.97 Aligned_cols=113 Identities=16% Similarity=0.147 Sum_probs=63.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc-cchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP-YVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
-|+++.++ +|++-.+.=|..|.++|.++ +++.++.+..-.+ .+... ...+.++ +.+.. .+..+..
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~----~~~~~~i-----~~~~~--~l~~~~~- 73 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQV----FFDDMGI-----RKPDY--FLEVAAD- 73 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHH----HHC-CCC-----CCCSE--ECCCCCC-
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHH----HHhhCCC-----CCCce--ecCCCCC-
Confidence 36666654 57777888889999999887 8877777654322 11111 0011122 11110 1111111
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEec--CCCchHHHHHHHhCCCcEEE
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVAD--IFFPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d--~~~~~~~~ia~~l~iP~v~~ 146 (383)
.. ..........+.+.+++.+||+|++- ..+.++...|.++|||.+.+
T Consensus 74 --~~------------~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 74 --NT------------AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp --CS------------HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred --CH------------HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 11 11222245567778888999998853 23444577888999997654
No 38
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=95.62 E-value=0.057 Score=48.24 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-C-CeEEEEeCCCCCccchhhHhhhhhcCCCcce-EeeeCCCccCCCCCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR-G-VKASVITTPANGPYVSKSVERANEMGIELDV-KTIKFPSVEAGLPEGC 82 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~ 82 (383)
+++||++++. +.++......++++|+++ | |+|+++++....+........ .++.. ..+. ...
T Consensus 7 ~~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~-- 71 (375)
T 3beo_A 7 ERLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-----FGITPDFDLN-------IMK-- 71 (375)
T ss_dssp SCEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-----HTCCCSEECC-------CCC--
T ss_pred cCceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-----cCCCCccccc-------cCC--
Confidence 4579999974 467888888999999988 5 888777765432211111000 12221 1111 000
Q ss_pred ccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc---hHHHHHHHhCCCcEEE
Q 036871 83 ENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP---WATDAAAKFGIPRLVF 146 (383)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~---~~~~ia~~l~iP~v~~ 146 (383)
. .. .....+ ......+.+.+++.+||+|++..... .+..++...++|++.+
T Consensus 72 ~---~~------~~~~~~----~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~ 125 (375)
T 3beo_A 72 D---RQ------TLIDIT----TRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHV 125 (375)
T ss_dssp T---TC------CHHHHH----HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEE
T ss_pred C---cc------cHHHHH----HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 0 00 000000 11233456677788999999854322 2345678889998853
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=95.38 E-value=0.042 Score=51.19 Aligned_cols=37 Identities=11% Similarity=0.152 Sum_probs=29.7
Q ss_pred cEEEEEcCC------CcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFM------AHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~------~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+||++++.. ..|=-.-+..|+++|+++||+|++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 488888763 2355567889999999999999999974
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=94.92 E-value=0.074 Score=49.52 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=29.3
Q ss_pred cEEEEEcCC------CcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFM------AHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~------~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+||++++.. ..|=-.-+..|+++|+++||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 488888753 2344566889999999999999999974
No 41
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=94.61 E-value=0.2 Score=44.53 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=30.2
Q ss_pred cEEEEEcC---CCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPF---MAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~---~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+||++++. +..|.-.-+..++++|+++||+|++++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 40 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQS 40 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecC
Confidence 36887754 34577788999999999999999999975
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=93.22 E-value=0.23 Score=49.23 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=23.3
Q ss_pred CCCCEEEecCCCc--hHHHHHHHhCCCcEEEecc
Q 036871 118 HKPDCLVADIFFP--WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 118 ~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~~~~ 149 (383)
.+||+|.+..... .+..+++.+|+|+|.....
T Consensus 406 ~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hs 439 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 439 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred CCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEec
Confidence 5799999865332 4677888999998875443
No 43
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=92.90 E-value=0.35 Score=40.49 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPY 49 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~ 49 (383)
|+|||+.-=-+. +---+..|+++|.+.| +|+++++...+..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 567777654443 3344889999999999 5999998776543
No 44
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=91.47 E-value=2.1 Score=34.84 Aligned_cols=108 Identities=11% Similarity=0.129 Sum_probs=61.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCC--eEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGV--KASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH--~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+||+|+.++..+ .+..+.++|.+.+| +|..+.+......+..... ..++.+..++. ....
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~~- 63 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCK-----KHNVECKVIQR--------KEFP- 63 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHH-----HHTCCEEECCG--------GGSS-
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHH-----HcCCCEEEeCc--------cccc-
Confidence 4689999888753 36777888888888 7765554332222222111 12555544320 0000
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
. .+...+++.+.|++.++|++|+=.+.. ....+-+.....++-++++
T Consensus 64 -----~-------------r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 -----S-------------KKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -----S-------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -----c-------------hhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 011244667788889999999766533 4555556666667766654
No 45
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.79 E-value=0.82 Score=38.02 Aligned_cols=41 Identities=15% Similarity=0.040 Sum_probs=31.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
+|||+.-=-+. |-.-+.+|+++|.+.| +|+++++...+.-.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 57777665543 4455899999999998 99999998765443
No 46
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=90.71 E-value=3.2 Score=33.66 Aligned_cols=108 Identities=6% Similarity=0.045 Sum_probs=63.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+||+++-++..+ .+.++.++|.+. +|+|..+.+......+..... ..++.+..++. ....
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~-----~~gIp~~~~~~--------~~~~- 65 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAA-----RENVPAFVFSP--------KDYP- 65 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHH-----HTTCCEEECCG--------GGSS-
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHH-----HcCCCEEEeCc--------cccc-
Confidence 5689998888754 366777888887 789876665432222222211 12565554320 0000
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
. -+...+++.+.+++.++|++|+=.+.. ....+-+.....++-++++
T Consensus 66 -----~-------------~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 -----S-------------KAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -----S-------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -----c-------------hhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 011244667788889999999766533 5566667777777776654
No 47
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=90.69 E-value=2.8 Score=34.45 Aligned_cols=109 Identities=9% Similarity=0.039 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
+|+||+|+.++..+ .+.++.++|.+. +++|..+.+......+..... ..++.+..++. ....
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~~ 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERAR-----RAGVDALHMDP--------AAYP 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHH-----HTTCEEEECCG--------GGSS
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHH-----HcCCCEEEECc--------cccc
Confidence 46799999888743 367777888877 688866655432222222111 12565554320 0000
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
. . +...+++.+.|++.++|+||+=.+.. ....+-+.+...++-+.++
T Consensus 85 ------~----r---------~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 ------S----R---------TAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ------S----H---------HHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ------c----h---------hhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 11245667788889999999766533 5566667777777776654
No 48
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=90.31 E-value=0.78 Score=40.38 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=64.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCc-ceEeeeCCCccCCCCCCCcc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIEL-DVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~ 84 (383)
+||+++.....|++.-...+.++|.++ |.+|++++.+.+.+.++.. ..+ ++..++. ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~-------~~~~-- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPL-------GHGA-- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecC-------Cccc--
Confidence 389999999999999999999999997 9999999997654333221 123 2222210 0000
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEE
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLV 145 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~ 145 (383)
..+. ....+...+++.+||++|.=....-...++...++|...
T Consensus 64 ----------~~~~--------~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 ----------LEIG--------ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----------CHH--------HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ----------cchH--------HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0000 112445667888999998322223455677788999743
No 49
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=90.19 E-value=1.7 Score=38.45 Aligned_cols=106 Identities=8% Similarity=0.036 Sum_probs=71.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcc-eEeeeCCCccCCCCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELD-VKTIKFPSVEAGLPEG 81 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ 81 (383)
...+||+++-....|++.-...+.++|.++ +.+|++++.+.+.+.++.. ..++ +..++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS---------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc---------
Confidence 456799999999999999999999999998 9999999998876655443 2343 3333100
Q ss_pred CccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCC-CEEEecCCCchHHHHHHHhCCCcEE
Q 036871 82 CENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKP-DCLVADIFFPWATDAAAKFGIPRLV 145 (383)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-D~vi~d~~~~~~~~ia~~l~iP~v~ 145 (383)
. .. ..+.. ...+...|++.+| |++|.=....-...++...|+|...
T Consensus 69 -----~--~~---~~~~~--------~~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -----G--RH---NSISG--------LNEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -----S--HH---HHHHH--------HHHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -----c--cc---ccHHH--------HHHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 00 11111 1123445677799 9999654444456678888999654
No 50
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=89.59 E-value=0.79 Score=35.83 Aligned_cols=84 Identities=8% Similarity=0.078 Sum_probs=50.3
Q ss_pred EEEEEeCCcccCCHhhHHHHHHHHHhC-CCcEEEEEecCCCCCCchhhhccCchhHH--HhhCCCCeEecCcccH---HH
Q 036871 288 VVYICFGSIANFTSAQLMEIATGLEAS-RRNFIWVVRRNKNDGGEEEKEAWLPEGFE--KRMKGKGLIIRGWAPQ---VL 361 (383)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~a~~~~-~~~viw~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~~~~~~Pq---~~ 361 (383)
.+++..|+.. ..+....++++++.+ +.++++. +.+... +.+. +-.+ +....+||++..|+|+ .+
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~-G~~~~~---~~l~----~~~~~~~~~l~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIV-GWFSKG---DHAE----RYARKIMKIAPDNVKFLGSVSEEELID 93 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEE-BCCCTT---STHH----HHHHHHHHHSCTTEEEEESCCHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEE-ecCccH---HHHH----HHHHhhhcccCCcEEEeCCCCHHHHHH
Confidence 4566677775 245577788888887 4555554 333321 1211 1222 2235678999999998 56
Q ss_pred hhcCCCceeecc---ccccc-hhccC
Q 036871 362 ILDHEAVGGFVT---HCGWN-STIEA 383 (383)
Q Consensus 362 lL~~~~~~~fIt---HGG~~-s~~Ea 383 (383)
++..+++ +|. +.|++ ++.||
T Consensus 94 ~~~~adi--~v~ps~~e~~~~~~~Ea 117 (177)
T 2f9f_A 94 LYSRCKG--LLCTAKDEDFGLTPIEA 117 (177)
T ss_dssp HHHHCSE--EEECCSSCCSCHHHHHH
T ss_pred HHHhCCE--EEeCCCcCCCChHHHHH
Confidence 7888888 665 33444 55554
No 51
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=89.30 E-value=0.24 Score=45.05 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=31.7
Q ss_pred CCCcEEEEEcCCCc-----ccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAH-----GHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~-----gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..++||++++.... |=.+.+..++++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 35679998875522 333568899999999999999999864
No 52
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.43 E-value=0.44 Score=45.02 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCC------cccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMA------HGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~------~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.++||++++.-. .|=-.-+-.|+++|+++||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 477999997431 222234778999999999999999964
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=88.25 E-value=2.5 Score=38.13 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=25.1
Q ss_pred CCcEEEEEcCC-C-cccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFM-A-HGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~-~-~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.++||++++.. . .+.-.-...++++|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFRTPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCCChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 35689988743 1 222222345788999999 99999543
No 54
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=86.55 E-value=8.9 Score=30.52 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=61.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCC-ccc-hhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANG-PYV-SKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
+-.|.+++..+.|-..--+++|.+.+.+|+.|.++...... ..= ..... ..++++..... ++..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~-----~L~v~~~~~g~---------gf~~ 93 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE-----PHGVEFQVMAT---------GFTW 93 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG-----GGTCEEEECCT---------TCCC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH-----hCCcEEEEccc---------cccc
Confidence 45888999999999999999999999999999999754421 100 01111 11455554421 2211
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP 130 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~ 130 (383)
.. . .. ..-...........++.+.+.++|+||.|-+..
T Consensus 94 -~~-~-----~~-~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 94 -ET-Q-----NR-EADTAACMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp -CG-G-----GH-HHHHHHHHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred -CC-C-----Cc-HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 11 0 10 111122233455666777888999999997633
No 55
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=86.29 E-value=9.9 Score=30.71 Aligned_cols=107 Identities=7% Similarity=0.078 Sum_probs=63.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENL 85 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 85 (383)
+||+++.++..+ .+.+|.+++.+. +|+|..+.+............ ..++.+..++. ....
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERAR-----QAGIATHTLIA--------SAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHH-----HTTCEEEECCG--------GGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHH-----HcCCcEEEeCc--------cccc--
Confidence 378888888754 367777777776 689876665433222222211 12565554310 0000
Q ss_pred cccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 86 DAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
. .+...+++.+.|++.++|++|+=.+. .....+-+......+-++++
T Consensus 63 ----~-------------r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ----S-------------REAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----S-------------HHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----c-------------hhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 01134567788899999999976654 34566667777777776654
No 56
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=86.18 E-value=1.3 Score=35.84 Aligned_cols=40 Identities=8% Similarity=-0.008 Sum_probs=35.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
++.||++.-+|+.|-+. ...|.+.|.++|++|.++.++.-
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccH
Confidence 45699999999988877 88999999999999999998653
No 57
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=86.08 E-value=7.3 Score=31.56 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=61.0
Q ss_pred CCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCC-CCccchhhHhhhhhcCCCcceEeeeCCCccCCCC
Q 036871 3 SKVPQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPA-NGPYVSKSVERANEMGIELDVKTIKFPSVEAGLP 79 (383)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 79 (383)
++.+++||+++.++..+- +.+|.+++.+. +++|..+.+.. .....+.+ . ..++.+..++..
T Consensus 4 ~~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A-~-----~~gIp~~~~~~~------- 67 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIA-Q-----SYGIPTFVVKRK------- 67 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHH-H-----HTTCCEEECCBT-------
T ss_pred CCCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHH-H-----HcCCCEEEeCcc-------
Confidence 345677999998887544 45666666554 37887766632 22111111 1 125655544210
Q ss_pred CCCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 80 EGCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
.. . .+++.+.|++.++|++|+-.+.. ....+-+...-..+-++++
T Consensus 68 -~~------~------------------~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 68 -PL------D------------------IEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -TB------C------------------HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -cC------C------------------hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 0 14666788889999999766543 5566667777777776654
No 58
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=84.11 E-value=1.3 Score=35.79 Aligned_cols=44 Identities=7% Similarity=0.108 Sum_probs=35.6
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.++.||++.-+++.+-+. ...|.+.|.++| +|.++.++.-...+
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 346799999999988777 889999999999 99999987654443
No 59
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=83.81 E-value=1.8 Score=34.79 Aligned_cols=44 Identities=16% Similarity=0.066 Sum_probs=35.1
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP 48 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~ 48 (383)
.++.||++.-+|+.+=+.=...+.+.|.++|++|.++.++.-..
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 45679999999984444268999999999999999999876443
No 60
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=83.72 E-value=8.2 Score=33.74 Aligned_cols=40 Identities=15% Similarity=0.088 Sum_probs=32.7
Q ss_pred CcEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 7 QLHVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 7 ~~~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
+.+|+|++. |+.|-..-...+|..|+++|++|.++..+..
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 456665554 4778999999999999999999999998754
No 61
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=83.67 E-value=7.1 Score=31.45 Aligned_cols=110 Identities=12% Similarity=0.134 Sum_probs=61.8
Q ss_pred CCCCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEeCCC-CCccchhhHhhhhhcCCCcceEeeeCCCccCCCCC
Q 036871 4 KVPQLHVFFFPFMAHGHMIPIVDMAKLFASRG--VKASVITTPA-NGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPE 80 (383)
Q Consensus 4 ~~~~~~il~~~~~~~gH~~p~~~la~~L~~rG--H~Vt~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 80 (383)
.|+++||+++.++..+. +.+|.+++.+.+ ++|..+.+.. .....+.+ . ..++.+..++..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A-~-----~~gIp~~~~~~~-------- 66 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKA-E-----AAGIATQVFKRK-------- 66 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHH-H-----HTTCCEEECCGG--------
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHH-H-----HcCCCEEEeCcc--------
Confidence 35567999998887544 456666666543 7887766632 22111111 1 236665554210
Q ss_pred CCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 81 GCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
.+. .. +...+++.+.|++.++|++|+=.+.. ....+-+.+.-.++-++++
T Consensus 67 ~~~------~r-------------~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 67 DFA------SK-------------EAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp GSS------SH-------------HHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ccC------CH-------------HHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 000 00 11245777888889999999766543 4556666666666766544
No 62
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=82.56 E-value=9.1 Score=33.64 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=34.4
Q ss_pred CCCcEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 5 VPQLHVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 5 ~~~~~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
+++.+|++++. ++.|-..-..+||..|+++|++|.++..+..
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 34566766655 4779999999999999999999999998763
No 63
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=82.54 E-value=1.9 Score=32.25 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++.+|++.+.+.-.|-.-..-++..|..+|++|..+....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~ 41 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLS 41 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4569999999999999999999999999999999876533
No 64
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=82.09 E-value=16 Score=29.41 Aligned_cols=106 Identities=9% Similarity=0.098 Sum_probs=59.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcccc
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLD 86 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 86 (383)
||+++.++..+. +.+|.+++.+. +|+|..+.+............ ..++.+..++. ....
T Consensus 2 riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~-----~~gIp~~~~~~--------~~~~--- 62 (209)
T 1meo_A 2 RVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAE-----RAGIPTRVINH--------KLYK--- 62 (209)
T ss_dssp EEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHH-----HTTCCEEECCG--------GGSS---
T ss_pred eEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHH-----HcCCCEEEECc--------cccC---
Confidence 788888887654 44555666554 799877765443322221111 12555544320 0000
Q ss_pred ccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 87 AITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
. . +...+++.+.|++.++|+||+=.+. .....+-+.....++-+.++
T Consensus 63 ---~----r---------~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 63 ---N----R---------VEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ---S----H---------HHHHHHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---c----h---------hhhhHHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 0 0 1123456778888999999866553 34555666677777776654
No 65
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=81.95 E-value=1.8 Score=33.91 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=35.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccch
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVS 51 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~ 51 (383)
+||++.-+++.+=.. ...+.+.|+++|++|.++.++.-...+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 489999999877665 8899999999999999999977655443
No 66
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=81.83 E-value=1.4 Score=35.25 Aligned_cols=43 Identities=12% Similarity=-0.036 Sum_probs=35.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP 48 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~ 48 (383)
.++.||++.-+|+.+=.. ...+.+.|.++|++|.++.++.-..
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 456799999999977776 7899999999999999999865443
No 67
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=81.68 E-value=3.6 Score=35.71 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.+|+||+|+-++..+ ....++|.++||+|..+.+...
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPD 38 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCC
Confidence 468899999888644 3456778888999987776544
No 68
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=81.26 E-value=13 Score=30.05 Aligned_cols=109 Identities=8% Similarity=0.143 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFAS-RGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
+++||+++.++..+.+. +|.++..+ .+++|..+.+..-......... ..++.+..++.. .+
T Consensus 4 ~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~-----~~gIp~~~~~~~--------~~-- 65 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQ-----QADIPTHIIPHE--------EF-- 65 (215)
T ss_dssp CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHH-----HTTCCEEECCGG--------GS--
T ss_pred CCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHH-----HcCCCEEEeCcc--------cc--
Confidence 35699999888755544 44455444 3689887666432221111111 136665554210 00
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
... . ...+++.+.|++.++|++|+=.+.. ....+-+.....++-++++
T Consensus 66 ----~~r---~----------~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 ----PSR---T----------DFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ----SSH---H----------HHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----Cch---h----------HhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 000 0 1245677888999999999766543 5566667777677776654
No 69
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=80.98 E-value=5.7 Score=34.62 Aligned_cols=40 Identities=5% Similarity=0.003 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
++.+.+++.++|++|+=.+.. ....+-+.....++-++++
T Consensus 90 ~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 90 DVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp HHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 455678889999999766533 3444555555566766655
No 70
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=79.73 E-value=3.2 Score=40.73 Aligned_cols=91 Identities=15% Similarity=0.264 Sum_probs=62.9
Q ss_pred CCcEEEEEeCCcccCCHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHh-hCCCCeEecCcccHHHhh
Q 036871 285 PNSVVYICFGSIANFTSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKR-MKGKGLIIRGWAPQVLIL 363 (383)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~-~~~~nv~~~~~~Pq~~lL 363 (383)
++.+||.||......+++.+..-.+-+++.+.-++|-....... +++ +-..+++. +.++.+++.+..|..+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~----l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPN----IQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHH----HHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHH----HHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 46799999999999999999988999999999999998765421 011 11112111 234678888899877655
Q ss_pred ---cCCCceeecc---ccccchhccC
Q 036871 364 ---DHEAVGGFVT---HCGWNSTIEA 383 (383)
Q Consensus 364 ---~~~~~~~fIt---HGG~~s~~Ea 383 (383)
...++ |+- .+|.+|+.||
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~ea 618 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDV 618 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHH
Confidence 34554 664 6777777775
No 71
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=79.64 E-value=3.5 Score=32.72 Aligned_cols=40 Identities=5% Similarity=0.066 Sum_probs=33.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP 48 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~ 48 (383)
.||++.-+|+.|-.. ...+.++|.++|++|.++.++.-..
T Consensus 2 k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 2 QKIALCITGASGVIY-GIKLLQVLEELDFSVDLVISRNAKV 41 (189)
T ss_dssp CEEEEEECSSTTHHH-HHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEChhHHH
Confidence 589999999988664 7889999999999999999866433
No 72
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=78.49 E-value=10 Score=33.98 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++.||+++-.+..+ ..+++++.+.|++|+++...
T Consensus 5 ~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCC
Confidence 467799999877543 56899999999999998653
No 73
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=78.38 E-value=6.6 Score=34.04 Aligned_cols=36 Identities=11% Similarity=0.024 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|+++||+|+-++.. -....++|.++||+|..+.+..
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 45679999977743 3455678888999987766643
No 74
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=77.60 E-value=5.5 Score=32.35 Aligned_cols=110 Identities=8% Similarity=0.087 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCcccHHH----HHHHHHHHHhC-CCeEEEEeCCCC-CccchhhHhhhhhcCCCcce-EeeeCCCccCCCC
Q 036871 7 QLHVFFFPFMAHGHMIP----IVDMAKLFASR-GVKASVITTPAN-GPYVSKSVERANEMGIELDV-KTIKFPSVEAGLP 79 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p----~~~la~~L~~r-GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~ 79 (383)
|.+|+++.-...|.+++ ++..|++|++. |-+|+.++-... .+..+... ..|+.- ..+..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~------~~Gad~v~~v~~-------- 68 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQIL------PYGVDKLHVFDA-------- 68 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHG------GGTCSEEEEEEC--------
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHH------hcCCCEEEEecC--------
Confidence 55788888776676655 57778888874 777776654332 22223221 124432 22210
Q ss_pred CCCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCch---HHHHHHHhCCCcEEEe
Q 036871 80 EGCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPW---ATDAAAKFGIPRLVFH 147 (383)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~---~~~ia~~l~iP~v~~~ 147 (383)
+....... . .....+.+.+++.+||+||.-..... +..+|.+|++|.+.-+
T Consensus 69 ~~~~~~~~-------~----------~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv 122 (217)
T 3ih5_A 69 EGLYPYTS-------L----------PHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADC 122 (217)
T ss_dssp GGGSSCCH-------H----------HHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSC
T ss_pred cccccCCH-------H----------HHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceE
Confidence 01111110 0 12345556666778999998875542 6778899999987643
No 75
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=77.48 E-value=2.3 Score=34.31 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=34.6
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCCCCccc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFAS-RGVKASVITTPANGPYV 50 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~-rGH~Vt~~~~~~~~~~~ 50 (383)
.++.||++..+++.+=+. ...+.+.|.+ +|++|.++.++.-...+
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 356799999999977655 5899999999 89999999987654443
No 76
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=77.47 E-value=2.8 Score=33.80 Aligned_cols=42 Identities=5% Similarity=-0.047 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIP-IVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p-~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
.++.||++.-+|+ +...- ...+.+.|.++|++|.++.++.-.
T Consensus 3 l~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 3 LKGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CTTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4556999999987 44554 789999999999999999987644
No 77
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=76.86 E-value=4 Score=30.52 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=30.7
Q ss_pred CCCCCCCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 1 MGSKVPQLHVFFFPFM--AHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 1 m~~~~~~~~il~~~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
|.++..| |++++-.. ....+-..+-++..|.++||+|+++..+.-
T Consensus 1 ~~~~~~m-~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAA 47 (157)
T 1kjn_A 1 MKTESTG-KALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAA 47 (157)
T ss_dssp -----CC-EEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred Cccccce-eeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHH
Confidence 5555555 56655443 556677788999999999999999998653
No 78
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=76.49 E-value=17 Score=29.40 Aligned_cols=109 Identities=9% Similarity=0.078 Sum_probs=60.9
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFAS-RGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
..++||+++.++..+.+ .+|.+++.+ .+++|..+.+.......+.+ . ..++.+...+.. .+.
T Consensus 10 ~~~~ri~vl~SG~gsnl---~all~~~~~~~~~eI~~Vis~~~a~~~~~A-~-----~~gIp~~~~~~~--------~~~ 72 (215)
T 3da8_A 10 SAPARLVVLASGTGSLL---RSLLDAAVGDYPARVVAVGVDRECRAAEIA-A-----EASVPVFTVRLA--------DHP 72 (215)
T ss_dssp CSSEEEEEEESSCCHHH---HHHHHHSSTTCSEEEEEEEESSCCHHHHHH-H-----HTTCCEEECCGG--------GSS
T ss_pred CCCcEEEEEEeCChHHH---HHHHHHHhccCCCeEEEEEeCCchHHHHHH-H-----HcCCCEEEeCcc--------ccc
Confidence 34679999998875544 444455433 34688776665432211111 1 136655544210 000
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
. . +...+++.+.|++.++|++++=.+. .....+-+.+....+-++++
T Consensus 73 ------~----r---------~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 73 ------S----R---------DAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ------S----H---------HHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ------c----h---------hhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 0 0 1124577788899999999865543 35556666666667766644
No 79
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.40 E-value=3.8 Score=31.54 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++.+|++.+.+...|-.-..-++..|..+|++|.++....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4679999999999999999999999999999999887543
No 80
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=75.00 E-value=2.6 Score=33.17 Aligned_cols=42 Identities=5% Similarity=0.087 Sum_probs=34.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.||++.-+|+.+=. =...+.+.|.++|++|.++.++.-...+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 38999999987666 5789999999999999999987654443
No 81
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=74.50 E-value=5.9 Score=31.93 Aligned_cols=45 Identities=11% Similarity=-0.036 Sum_probs=38.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.+.+|++.+.++..|-....-++..|..+|++|.++....-.+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 356999999999999999999999999999999998875443333
No 82
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=74.02 E-value=7.9 Score=32.37 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.+.+|++.+.+...|-....-++..|..+|++|.++....-.+.+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467999999999999999999999999999999988764433333
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=73.95 E-value=4.9 Score=32.05 Aligned_cols=40 Identities=10% Similarity=0.064 Sum_probs=33.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCCCCc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPANGP 48 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~~~~ 48 (383)
+||++.-+|+.|-.. ...+.+.|.++ |++|.++.++.-..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~ 41 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKT 41 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHH
Confidence 389999999977766 89999999999 99999999866433
No 84
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=73.93 E-value=17 Score=32.80 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++.+||+++..+.. .. .+.++.++.|++|+++.+..
T Consensus 3 ~~~k~l~Il~~~~~--~~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 3 KRNKNLAIICQNKH--LP---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCCEEEEECCCTT--CC---HHHHHHHHTTCEEEEEEETT
T ss_pred CCCcEEEEECCChh--HH---HHHHHHHHCCCEEEEEECCC
Confidence 45668888865532 22 35677788899999887644
No 85
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=73.64 E-value=11 Score=33.60 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=30.2
Q ss_pred CcEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFM-AHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~-~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|++|++++.- +.|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 4567766554 668888899999999999999999888
No 86
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=72.43 E-value=4.1 Score=34.73 Aligned_cols=34 Identities=15% Similarity=0.338 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|||++ +|+.|-+- ..|+++|.++||+|+.++-..
T Consensus 1 MkILV--TGatGfIG--~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLV--GGGTGFIG--TALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEE--ECCCCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 36554 36667766 568999999999999987533
No 87
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=70.14 E-value=4.7 Score=30.43 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.+.||+++= .|++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 345888883 36655 78899999999999999864
No 88
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=69.29 E-value=17 Score=31.85 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=32.2
Q ss_pred CcEEEEEcC-CCcccHHHHHHHHHHHH--hCCCeEEEEeCCC
Q 036871 7 QLHVFFFPF-MAHGHMIPIVDMAKLFA--SRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~-~~~gH~~p~~~la~~L~--~rGH~Vt~~~~~~ 45 (383)
..+|++++. ++.|-..-...+|..|+ ++|++|.++..+.
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 346666654 57799999999999999 9999999999874
No 89
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=69.18 E-value=9.8 Score=36.25 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=58.0
Q ss_pred cEEEEEeCCcccCCHhhHHHHHHHHHhCCCcEEEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccHHHhh---
Q 036871 287 SVVYICFGSIANFTSAQLMEIATGLEASRRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQVLIL--- 363 (383)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq~~lL--- 363 (383)
.++|.+|+......++.+....+.+++.+..++|....+.....+.+ +-..+.+.-..+.+++.+.+|+.+.|
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~----~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHP----YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHH----HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHH----HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 69999999988888889888888888888888885422211000011 11122222234578888999987755
Q ss_pred cCCCceeecc---ccccchhccC
Q 036871 364 DHEAVGGFVT---HCGWNSTIEA 383 (383)
Q Consensus 364 ~~~~~~~fIt---HGG~~s~~Ea 383 (383)
..+++ |+. .+|..|+.||
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEA 537 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDM 537 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHH
T ss_pred hcCcE--EEeCCcccCChHHHHH
Confidence 67777 542 2566677664
No 90
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=68.67 E-value=12 Score=32.23 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=27.1
Q ss_pred HHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
++.+.|++.++|++|+=.+. .....+-+.....++-++++
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 45567888899999876553 34555556666667777665
No 91
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=68.60 E-value=9.2 Score=31.26 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
-+++|++..-|+.|-..-++.+|.+|+++|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3678999999999999999999999999999998887765
No 92
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=68.26 E-value=45 Score=26.78 Aligned_cols=108 Identities=12% Similarity=0.095 Sum_probs=60.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCcc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCEN 84 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (383)
|+||+++.++..+- +.+|.++..+. ..+|.++.+..-...+..... ..++.+..++. ....
T Consensus 2 m~riavl~Sg~Gsn---l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~-----~~gIp~~~~~~--------~~~~- 64 (211)
T 3p9x_A 2 MKRVAIFASGSGTN---AEAIIQSQKAGQLPCEVALLITDKPGAKVVERVK-----VHEIPVCALDP--------KTYP- 64 (211)
T ss_dssp -CEEEEECCTTCHH---HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHH-----TTTCCEEECCG--------GGSS-
T ss_pred CCEEEEEEeCCchH---HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHH-----HcCCCEEEeCh--------hhcC-
Confidence 57999999987433 56666665443 257877766432222222211 23665554421 0010
Q ss_pred ccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 85 LDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
. .+...+++.+.|++.++|++|+=.+.. ....+-+......+-+.++
T Consensus 65 -----~-------------r~~~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 65 -----S-------------KEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp -----S-------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -----c-------------hhhhHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 0 011245777888999999999766543 5556666666667776654
No 93
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=68.06 E-value=11 Score=32.67 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=24.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
+||+|+-++..+ ....++|.++||+|..+.+.+.
T Consensus 3 mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 3 LKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred cEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 499999888654 3456788889999877766443
No 94
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=67.87 E-value=52 Score=30.70 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHh-------CCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKF-------GIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l-------~iP~v~~ 146 (383)
++++.+++.++|++|.... +..+|+++ |||++.+
T Consensus 429 ~l~~~i~~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhcCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 5667788889999999875 45677777 9998874
No 95
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=67.71 E-value=6.9 Score=31.73 Aligned_cols=46 Identities=11% Similarity=-0.019 Sum_probs=38.1
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.++.+|++.+.+.-.|-....-++..|..+|++|+.+....-.+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 3467999999999999999999999999999999998765443333
No 96
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=67.52 E-value=12 Score=27.63 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=27.0
Q ss_pred cEEEEE-cCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFF-PFM--AHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~-~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.|++|+ ..+ .......-+.+|...++.||+|+++-...
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 355543 334 34567778888999999999999877654
No 97
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=66.99 E-value=46 Score=28.98 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=58.0
Q ss_pred CcEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCC
Q 036871 7 QLHVFFFPFMAHGH----MIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGC 82 (383)
Q Consensus 7 ~~~il~~~~~~~gH----~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 82 (383)
+.-|++.|..+... ..-+..|++.|.++|++|.++..+...+..++... .+ ....
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-------~~--------------~~~~ 243 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-------QM--------------ETKP 243 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-------TC--------------SSCC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-------hc--------------cccc
Confidence 34566777664432 33489999999999999988666544333222211 00 0000
Q ss_pred ccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecc
Q 036871 83 ENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~ 149 (383)
....... -..++.++++ +.|++|+- ..+...+|..+|+|.|.++..
T Consensus 244 ~~l~g~~-----------------sl~e~~ali~--~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 244 IVATGKF-----------------QLGPLAAAMN--RCNLLITN--DSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp EECTTCC-----------------CHHHHHHHHH--TCSEEEEE--SSHHHHHHHTTTCCEEEECSS
T ss_pred EEeeCCC-----------------CHHHHHHHHH--hCCEEEEC--CCCHHHHHHhcCCCEEEEECC
Confidence 0000000 0124455666 67899864 345677899999999987643
No 98
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=66.41 E-value=8 Score=32.26 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
+++|||+.-=-+. +-.-+.+|+++|.+ +|+|+++++...+.-.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 5679988776554 44558999999988 8999999998765443
No 99
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.45 E-value=6.3 Score=33.25 Aligned_cols=34 Identities=9% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++++|++. |+ |-+- ..|+++|.++||+|+.++-.
T Consensus 2 ~~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34577776 45 7544 57899999999999998754
No 100
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=65.08 E-value=7.6 Score=29.32 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=26.4
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+..+...+|+++=. |.+- ..+++.|.++|++|+++...
T Consensus 13 ~~~~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp ----CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred hhcccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 333445678998843 5444 55789999999999988754
No 101
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=64.38 E-value=8.8 Score=31.48 Aligned_cols=26 Identities=27% Similarity=0.347 Sum_probs=21.4
Q ss_pred cccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 18 HGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 18 ~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.|.+- .++|++|+++|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 56554 678999999999999998754
No 102
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=63.95 E-value=12 Score=27.97 Aligned_cols=37 Identities=11% Similarity=0.008 Sum_probs=28.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
-..++..+..-.+.+-+.+|...++.|++|+++.+..
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~ 46 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFW 46 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehH
Confidence 3345555566778899999999999999999988744
No 103
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=63.85 E-value=7.9 Score=31.21 Aligned_cols=34 Identities=12% Similarity=0.172 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|++|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 5576654 5556665 67899999999999988753
No 104
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=63.63 E-value=11 Score=27.87 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=27.9
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
.+.+++.+||+||.|...+ -|..+++.+ ++|.|.++..
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence 3455667899999999877 477777754 4787776654
No 105
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=63.55 E-value=25 Score=26.33 Aligned_cols=72 Identities=11% Similarity=0.144 Sum_probs=41.5
Q ss_pred cEEEEEeCCcccCCHhhHHHHHHHHHhCCC--cEEEEEecCCCCCCchhhhccCchhHHHhh--CCCCeEecCcccHHH-
Q 036871 287 SVVYICFGSIANFTSAQLMEIATGLEASRR--NFIWVVRRNKNDGGEEEKEAWLPEGFEKRM--KGKGLIIRGWAPQVL- 361 (383)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~--~viw~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~~~~~~Pq~~- 361 (383)
+++++..|.+.. .+....+++|+..+.. ++-+.+-+... ..+.+++.. .+.++++ .|+|+.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP----------DEKKIKLLAQKLGVKAEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST----------THHHHHHHHHHHTCEEEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc----------cHHHHHHHHHHcCCeEEE-eecCHHHH
Confidence 467788888743 4557777888887632 34333333221 111222111 2237888 9999765
Q ss_pred --hhcCCCceeecc
Q 036871 362 --ILDHEAVGGFVT 373 (383)
Q Consensus 362 --lL~~~~~~~fIt 373 (383)
++..+++ +|.
T Consensus 69 ~~~~~~adv--~v~ 80 (166)
T 3qhp_A 69 LEILKTCTL--YVH 80 (166)
T ss_dssp HHHHTTCSE--EEE
T ss_pred HHHHHhCCE--EEE
Confidence 6778888 664
No 106
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=63.41 E-value=6 Score=28.79 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHH---hCCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAK---FGIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~---l~iP~v~~ 146 (383)
+-.+.+++.+||+||.|...+ -|..+++. .++|.|.+
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 344566778999999999877 36666654 47886654
No 107
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=61.90 E-value=8.1 Score=33.04 Aligned_cols=40 Identities=13% Similarity=0.207 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|.+..++++|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 M~~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 4433345576654 5556654 57899999999999988753
No 108
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=61.85 E-value=9 Score=29.25 Aligned_cols=28 Identities=25% Similarity=0.211 Sum_probs=24.0
Q ss_pred EEEEEeCCcccCCHhhHHHHHHHHHhCC
Q 036871 288 VVYICFGSIANFTSAQLMEIATGLEASR 315 (383)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~a~~~~~ 315 (383)
.+|+|+||....+.+.+...++++++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999999877888888888888764
No 109
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=61.23 E-value=17 Score=25.66 Aligned_cols=40 Identities=25% Similarity=0.372 Sum_probs=27.5
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|...+ -|..+.+.+ ++|.+.++..
T Consensus 37 ~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 37 IALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 334556778899999998765 366666554 4787776654
No 110
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=61.11 E-value=14 Score=30.55 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCcc-----------cHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHG-----------HMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~g-----------H~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.|+||+++-+...+ ...=+......|.++|++|+++++.
T Consensus 2 ~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 2 TPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp -CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35689988776422 1244777788899999999999974
No 111
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=61.06 E-value=13 Score=28.44 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=24.7
Q ss_pred EEEEEeCCcccCCHhhHHHHHHHHHhCC
Q 036871 288 VVYICFGSIANFTSAQLMEIATGLEASR 315 (383)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~a~~~~~ 315 (383)
.+|+++||....+.+.+...++++++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999888888999999998864
No 112
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=60.26 E-value=47 Score=28.40 Aligned_cols=40 Identities=10% Similarity=0.095 Sum_probs=26.2
Q ss_pred HHHHHhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
++.+.+++.++|++|+=.+.. ....+-+.....++-++++
T Consensus 66 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 455677888999999765533 4455555555667777665
No 113
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=59.64 E-value=10 Score=28.89 Aligned_cols=28 Identities=25% Similarity=0.211 Sum_probs=23.2
Q ss_pred EEEEEeCCcccCCHhhHHHHHHHHHhCC
Q 036871 288 VVYICFGSIANFTSAQLMEIATGLEASR 315 (383)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~a~~~~~ 315 (383)
+.|+|+||..+.+.+.++..++++++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999999877778888888888763
No 114
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=58.36 E-value=14 Score=27.44 Aligned_cols=43 Identities=12% Similarity=0.111 Sum_probs=25.1
Q ss_pred CCCCCCCcEEEE-EcCCCcccHHH--HHHHHHHHHhCCCeEEEEeCCC
Q 036871 1 MGSKVPQLHVFF-FPFMAHGHMIP--IVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 1 m~~~~~~~~il~-~~~~~~gH~~p--~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|..+|| |+++ +..+-+|+... -+.+|.++...||+|.++-..+
T Consensus 1 ~~~~Mk--k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 1 MSEVVK--KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp ----CC--EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred Cccchh--EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 444433 3443 34444566444 4666889999999998877543
No 115
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=58.12 E-value=12 Score=32.59 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.++||.|+=.+..| |.++|+.|.++||+|+..-...
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCCC
Confidence 46689999998877 7789999999999999876543
No 116
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=58.08 E-value=12 Score=28.66 Aligned_cols=29 Identities=21% Similarity=0.157 Sum_probs=24.3
Q ss_pred cEEEEEeCCcccCCHhhHHHHHHHHHhCC
Q 036871 287 SVVYICFGSIANFTSAQLMEIATGLEASR 315 (383)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~a~~~~~ 315 (383)
..+|+++||....+.+.+...++++.+.+
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 36999999999877788888888888753
No 117
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=57.82 E-value=53 Score=29.84 Aligned_cols=45 Identities=9% Similarity=-0.051 Sum_probs=37.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccch
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVS 51 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~ 51 (383)
.--+++..-|+.|=..-.+.+|...+.+|..|.+++.+...+.+.
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHHH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHHH
Confidence 335777888899999999999999999999999999877655443
No 118
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=57.39 E-value=6.4 Score=34.07 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=38.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccch
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVS 51 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~ 51 (383)
+||+++-..+-|++.-...+.++|.++ +.+|++++.+.+.+.++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 389999999999999999999999998 99999999987655443
No 119
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=57.21 E-value=8.2 Score=28.47 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++.||+++=. |.+ =..+++.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 4568888754 443 367899999999999988753
No 120
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=57.14 E-value=12 Score=28.60 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.9
Q ss_pred EEEEEeCCcccCCHhhHHHHHHHHHhCC
Q 036871 288 VVYICFGSIANFTSAQLMEIATGLEASR 315 (383)
Q Consensus 288 vV~vs~GS~~~~~~~~~~~~~~a~~~~~ 315 (383)
.+|+|+||..+.+.+.+...++++++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999999878888888888888764
No 121
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=56.07 E-value=85 Score=29.18 Aligned_cols=34 Identities=12% Similarity=0.334 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHh-------CCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKF-------GIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l-------~iP~v~~ 146 (383)
++++.+++.++|++|.+.. +..+|+++ +||++.+
T Consensus 425 ~l~~~i~~~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhcCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 4556677778999998864 57788888 9999864
No 122
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.74 E-value=15 Score=25.99 Aligned_cols=28 Identities=4% Similarity=0.058 Sum_probs=22.0
Q ss_pred cccHHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 036871 18 HGHMIPIVDMAKLFASR-GV-KASVITTPA 45 (383)
Q Consensus 18 ~gH~~p~~~la~~L~~r-GH-~Vt~~~~~~ 45 (383)
......-+.+|..+.+. || +|+++-..+
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 34466678999999999 99 998887643
No 123
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=55.72 E-value=15 Score=31.07 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCcEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPF--MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~--~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+|.+++.+.. ++.|=..-...||..|+++|++|.++-.+.
T Consensus 2 ~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp --CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3556665554 467888999999999999999999887766
No 124
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=55.69 E-value=17 Score=28.45 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=24.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++|++. ++.|-+- ..++++|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 366554 5556554 67899999999999988753
No 125
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.29 E-value=11 Score=34.50 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=28.2
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~ 146 (383)
++++.+++.++|++|.... +..+|+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 4666777889999999865 678999999998874
No 126
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=55.24 E-value=12 Score=32.65 Aligned_cols=85 Identities=11% Similarity=0.083 Sum_probs=46.3
Q ss_pred CCcEEEEEeCCcccCCHhhHHHHHHHHHhC-----CCcEEEEEecCCCCCCchhhhccCchhHHHhh-CCCCeEecCccc
Q 036871 285 PNSVVYICFGSIANFTSAQLMEIATGLEAS-----RRNFIWVVRRNKNDGGEEEKEAWLPEGFEKRM-KGKGLIIRGWAP 358 (383)
Q Consensus 285 ~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~-----~~~viw~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~~~~~~P 358 (383)
++++++++.|...... +.+..+++|++.+ +.++++ +.+.. .++. +.+++.. ..++|++..+++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~----~~~~----~~~~~~~~~~~~v~~~g~~~ 272 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMN----PVVR----ETANDILGDYGRIHLIEPLD 272 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSC----HHHH----HHHHHHHTTCTTEEEECCCC
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCC----HHHH----HHHHHHhhccCCEEEeCCCC
Confidence 3567778888764321 3455666776543 234333 32221 1111 1222221 236899877776
Q ss_pred HH---HhhcCCCceeeccccccchhccC
Q 036871 359 QV---LILDHEAVGGFVTHCGWNSTIEA 383 (383)
Q Consensus 359 q~---~lL~~~~~~~fItHGG~~s~~Ea 383 (383)
+. +++..+++ ||+..| +.+.||
T Consensus 273 ~~~~~~~~~~ad~--~v~~sg-~~~lEA 297 (375)
T 3beo_A 273 VIDFHNVAARSYL--MLTDSG-GVQEEA 297 (375)
T ss_dssp HHHHHHHHHTCSE--EEECCH-HHHHHH
T ss_pred HHHHHHHHHhCcE--EEECCC-ChHHHH
Confidence 54 57788888 998864 336665
No 127
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=54.48 E-value=19 Score=31.06 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=25.7
Q ss_pred CCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 3 SKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
...++++|++. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 7 ~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 7 VLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 33445566554 5556654 5688999999999998764
No 128
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=54.41 E-value=30 Score=24.19 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+|.||++++..+-|--.-...+-+.+.++|.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 466899888875555466779999999999998766543
No 129
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=54.09 E-value=9.1 Score=32.77 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=25.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+++||.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4444456799999665544 4678999999999998853
No 130
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=53.90 E-value=10 Score=32.55 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=27.9
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|..+.++++|.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3444567799999665544 4678999999999988743
No 131
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=53.46 E-value=15 Score=31.39 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=24.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+|++. |+.|.+- ..++++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 55544 5556654 578899999999999887644
No 132
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=53.02 E-value=17 Score=29.43 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+.++|++. |+.|.+- ..++++|+++||+|+++.-.
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 34465544 5556554 57889999999999988753
No 133
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=52.59 E-value=18 Score=29.50 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=23.2
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|..++++ +.++++-.+ |-+ =..+++.|+++|++|+++.-
T Consensus 1 M~~~~~~-k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEA-RRVLVYGGR-GAL--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CC-CEEEEETTT-SHH--HHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCC-CEEEEECCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4443444 444555443 433 36889999999999988764
No 134
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=52.43 E-value=14 Score=32.91 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=28.4
Q ss_pred cEEEEEcC--C-CcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPF--M-AHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~--~-~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+||++++. | ..|--.-...|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 47887742 3 346667788999999999 9999988644
No 135
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=51.87 E-value=28 Score=25.00 Aligned_cols=39 Identities=21% Similarity=0.405 Sum_probs=26.0
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 40 al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 40 ALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 33455678899999998765 355555433 5787776654
No 136
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=51.72 E-value=20 Score=26.17 Aligned_cols=40 Identities=15% Similarity=0.318 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh---------CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF---------GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l---------~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|.... -|..+.+.+ .+|.+.++..
T Consensus 49 ~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 49 QVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 334455668899999998665 366666544 2677776553
No 137
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=51.30 E-value=15 Score=30.76 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+||++. |+ |.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSF--GH-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEE--TC-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEE--CC-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 3477766 46 7665 57899999999999998754
No 138
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=51.28 E-value=31 Score=24.02 Aligned_cols=40 Identities=15% Similarity=0.487 Sum_probs=26.6
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHH----hCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAK----FGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~----l~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|...+ .|..+.+. .++|.+.++..
T Consensus 37 ~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 344556678899999998765 35555543 36787776654
No 139
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=51.26 E-value=88 Score=24.62 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=29.0
Q ss_pred HHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~ 149 (383)
..+.+++.++|+||.|.. ...+|+++|+|.+.+.+.
T Consensus 134 ~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 134 LISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecC
Confidence 445567789999999854 688999999999987764
No 140
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=51.21 E-value=22 Score=28.90 Aligned_cols=42 Identities=10% Similarity=-0.004 Sum_probs=31.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHH-HHhCCCeEEEEeCCCCCccc
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKL-FASRGVKASVITTPANGPYV 50 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~-L~~rGH~Vt~~~~~~~~~~~ 50 (383)
-+++.--|+.|-..-.+.++.. +.+.|..|.+++.+...+.+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 4667777788998888888765 45568889998887665443
No 141
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=50.73 E-value=24 Score=28.63 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=24.5
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|...++.++++ ++ ++.|-+- ..++++|+++|++|+++.-
T Consensus 1 m~~~~~~~~vl-VT-GasggiG--~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 1 MKLNFSGLRAL-VT-GAGKGIG--RDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp --CCCTTCEEE-EE-STTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CccCCCCCEEE-Ee-CCCchHH--HHHHHHHHHCCCEEEEEeC
Confidence 33444444444 43 4445544 5789999999999988764
No 142
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=50.64 E-value=23 Score=27.83 Aligned_cols=41 Identities=22% Similarity=0.345 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCcccHHHH-HHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPI-VDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~-~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|+|+||+++-....|+..-+ ..+++.|.++|++|.++.-..
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 45668887766667775543 456677777899998876543
No 143
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=49.57 E-value=33 Score=28.17 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCc-----------ccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAH-----------GHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~-----------gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|+||+++-.... -...=+......|.++|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 458888876422 134567777888999999999999754
No 144
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=49.22 E-value=24 Score=24.53 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCC-CeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRG-VKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rG-H~Vt~~~~ 43 (383)
.+++|+++ |+ |.+- ..+++.|.++| |+|+++..
T Consensus 4 ~~~~v~I~--G~-G~iG--~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVV--GA-GKIG--QMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp TCEEEEEE--CC-SHHH--HHHHHHHHHCSSEEEEEEES
T ss_pred CcCeEEEE--CC-CHHH--HHHHHHHHhCCCceEEEEeC
Confidence 35578877 44 5443 46789999999 99888765
No 145
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=49.19 E-value=20 Score=31.09 Aligned_cols=35 Identities=9% Similarity=0.159 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+++++|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 345566654 5556554 6788999999999998875
No 146
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=49.17 E-value=27 Score=28.26 Aligned_cols=43 Identities=12% Similarity=0.113 Sum_probs=23.9
Q ss_pred CCCCCCcEEEEEc-CCCc----ccHH-H-HHHHHHHHHhCCCeEEEEeCC
Q 036871 2 GSKVPQLHVFFFP-FMAH----GHMI-P-IVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 2 ~~~~~~~~il~~~-~~~~----gH~~-p-~~~la~~L~~rGH~Vt~~~~~ 44 (383)
...++|+||+++. +|-. +-++ - ...+++.|.+.||+|.++-..
T Consensus 20 ~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 20 FQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp ----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 3446778888665 4432 2222 2 334566667789999886653
No 147
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=49.14 E-value=16 Score=29.80 Aligned_cols=38 Identities=13% Similarity=0.029 Sum_probs=32.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
||+|..-|+.|=..-...||..|+++|++|.++-.+..
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 68887777888899999999999999999998876653
No 148
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=48.89 E-value=35 Score=28.21 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCc----------cc-HHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAH----------GH-MIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~----------gH-~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+||+++-+... |- ..=+..--..|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578998877642 22 444777788999999999999974
No 149
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=48.75 E-value=26 Score=28.46 Aligned_cols=37 Identities=8% Similarity=0.130 Sum_probs=29.6
Q ss_pred CCcEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 6 PQLHVFFFPFM-AHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 6 ~~~~il~~~~~-~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
+|..|++.... ..|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 45566665554 66889999999999999999999864
No 150
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=48.35 E-value=1.2e+02 Score=25.90 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~~ 149 (383)
++.++++ ..|++|.- ..+...+|..+|+|.|.++..
T Consensus 254 e~~ali~--~a~l~I~~--Dsg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 254 QAVILIA--ACKAIVTN--DSGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHHHHH--TSSEEEEE--SSHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHHH--hCCEEEec--CCHHHHHHHHcCCCEEEEECC
Confidence 4445666 67898863 245677899999999987643
No 151
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=48.33 E-value=39 Score=31.56 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCccc--HHHHHHHHHH--HHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGH--MIPIVDMAKL--FASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH--~~p~~~la~~--L~~rGH~Vt~~~~~ 44 (383)
+++||++++....+| -..+..+++. |.++||+|++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 567999998775544 4567889999 77889999999864
No 152
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=47.98 E-value=57 Score=28.68 Aligned_cols=35 Identities=6% Similarity=0.058 Sum_probs=26.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.+|.+.. -+.|-..-...|+++|.++| +|.+.+..
T Consensus 41 ~~iwih~-~s~G~~~~~~~L~~~L~~~~-~v~v~~~~ 75 (374)
T 2xci_A 41 GALWVHT-ASIGEFNTFLPILKELKREH-RILLTYFS 75 (374)
T ss_dssp TCEEEEC-SSHHHHHHHHHHHHHHHHHS-CEEEEESC
T ss_pred CCEEEEc-CCHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 4566555 44577889999999999999 88776653
No 153
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=47.74 E-value=31 Score=28.37 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|...++.. .++++-+ .|-+- ..++++|+++|++|+++.-
T Consensus 1 m~~~~~~k-~vlITGa-sggiG--~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 1 MQNRLRSA-LALVTGA-GSGIG--RAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCCCCTTC-EEEEETT-TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CccccCCC-EEEEECC-CChHH--HHHHHHHHHCCCEEEEEeC
Confidence 45544443 4445444 34343 6789999999999988764
No 154
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=47.44 E-value=28 Score=29.12 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=30.2
Q ss_pred HHHHHhhcCCCCEEEecCCCc------hHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP------WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~------~~~~ia~~l~iP~v~~~~~ 149 (383)
.+.+.+++.+||+||+..... .+..+|+.|++|.+.....
T Consensus 103 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 103 ILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 444555666899999876552 5899999999999987643
No 155
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=47.28 E-value=20 Score=30.78 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=26.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+||+++=.|+.|- .+|..|+++||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 4899998887774 46889999999999998754
No 156
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=47.21 E-value=15 Score=32.03 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++||+++=.+..| ..+|..|+++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345699999666555 3468889999999998854
No 157
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=47.00 E-value=24 Score=29.47 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=34.7
Q ss_pred CCCcEEEEEcCC---CcccHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 5 VPQLHVFFFPFM---AHGHMIPIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 5 ~~~~~il~~~~~---~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
+.++|..|++.+ +-|-=.-...|+..|..||++||..--+++.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 356699999887 4466777899999999999999998876654
No 158
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=46.94 E-value=29 Score=25.63 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=26.1
Q ss_pred cEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIP-IVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p-~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+||+++-...+|+..- ...+++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 4566555555677654 4557778888999999887654
No 159
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=46.81 E-value=16 Score=31.24 Aligned_cols=32 Identities=13% Similarity=0.193 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+||+++=.|..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4689988665555 4568999999999998864
No 160
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=46.43 E-value=29 Score=27.62 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
...++++.++..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3467777788888888899999999999999876654
No 161
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=46.30 E-value=30 Score=28.75 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=29.8
Q ss_pred HHHHHhhcCCCCEEEecCCCc------hHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP------WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~------~~~~ia~~l~iP~v~~~~~ 149 (383)
.+.+.+++.+||+||+..... .+..+|+.||+|.+.....
T Consensus 107 ~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 107 VLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 444455556799999776542 5899999999999987643
No 162
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=46.21 E-value=21 Score=29.04 Aligned_cols=26 Identities=27% Similarity=0.470 Sum_probs=20.2
Q ss_pred cccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 18 HGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 18 ~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.|-+ =.++|++|+++|++|+++..+.
T Consensus 33 Sg~i--G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 33 SGKM--GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp CSHH--HHHHHHHHHHTTCEEEEEECSC
T ss_pred ccHH--HHHHHHHHHHCCCEEEEEECCc
Confidence 4544 4688999999999999986543
No 163
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=45.96 E-value=17 Score=26.31 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.++|+++ ++ |.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~Ii--G~-G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIA--GI-GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEE--CC-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE--CC-CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 4588888 33 6654 4578999999999998865
No 164
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=45.88 E-value=30 Score=30.18 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHh--CCCeEEEEeCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFAS--RGVKASVITTP 44 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~--rGH~Vt~~~~~ 44 (383)
+++++|++. |+.|-+- ..|+++|.+ +||+|+++.-.
T Consensus 8 ~~~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 455566654 4445544 578899999 99999998753
No 165
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=45.67 E-value=21 Score=30.45 Aligned_cols=35 Identities=11% Similarity=0.056 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|++|++. |+.|.+- ..++++|.++||+|++++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 4456554 5566664 468899999999999987643
No 166
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=45.61 E-value=16 Score=31.60 Aligned_cols=38 Identities=26% Similarity=0.230 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|.. +++.||.|+=.|.-| ..+|..|+++||+|+++...
T Consensus 1 m~~-~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MAS-PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCC-CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 533 566799998666555 46789999999999988653
No 167
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=45.56 E-value=11 Score=34.78 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+||+|+=.+-.| +.-|..|+++||+|+++-..
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa~ 33 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQR 33 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEccC
Confidence 5578877544333 56678899999999998653
No 168
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=45.48 E-value=25 Score=28.82 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=30.0
Q ss_pred cEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPF--MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~--~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.+++.+.. ++.|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35554443 366888899999999999999999988765
No 169
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=45.46 E-value=23 Score=30.59 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=28.4
Q ss_pred hhHhhccCCCCCCcEEEEEeCCcc---cCCHhhHHHHHHHHHhCCCcEEEEEe
Q 036871 274 QECLRWLNSKQPNSVVYICFGSIA---NFTSAQLMEIATGLEASRRNFIWVVR 323 (383)
Q Consensus 274 ~~~~~~l~~~~~~~vV~vs~GS~~---~~~~~~~~~~~~a~~~~~~~viw~~~ 323 (383)
+++...++.. +++-|-+|+.. ..+.+.+..+++.+.+.+..|++-.+
T Consensus 127 ~el~~~~~~~---g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 127 KEMERCVKEL---GFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHHHHHHHTS---CCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHcc---CCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 5666666432 23333445443 34556788888888888877665443
No 170
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=45.10 E-value=1.4e+02 Score=25.34 Aligned_cols=106 Identities=11% Similarity=0.191 Sum_probs=62.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
+++||+++.++. || .+.+|..+-.+- +.+|..+.+..-. +..... ..++.+..++.. ..
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~--~~~~A~-----~~gIp~~~~~~~---------~~ 164 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQD--LRSMVE-----WHDIPYYHVPVD---------PK 164 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSST--THHHHH-----TTTCCEEECCCC---------SS
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHH--HHHHHH-----HcCCCEEEcCCC---------cC
Confidence 467999999887 54 356666655443 4788777663321 122111 237777665311 00
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
.. . ...+++.+.|++.++|+||.=.+. .....+-+.+.-..+-+.++
T Consensus 165 -----~r----~----------~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 -----DK----E----------PAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -----CC----H----------HHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -----CH----H----------HHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 00 0 023467788889999999976554 35556666666667766544
No 171
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=45.04 E-value=33 Score=32.36 Aligned_cols=45 Identities=4% Similarity=-0.065 Sum_probs=38.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
.+.+|++.+.++..|-....-++..|..+|++|+.+....-.+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 367999999999999999999999999999999988765443333
No 172
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=44.78 E-value=22 Score=30.44 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|.||.|+=.+.-|. ++|+.|+++||+|++.-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 56899998887774 67999999999999874
No 173
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=44.32 E-value=16 Score=31.72 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++||+++=.++.| ..+|..|+++||+|+++..
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 4589999766655 4568899999999999885
No 174
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=44.23 E-value=25 Score=29.85 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+++|++. |+.|.+- ..++++|.++||+|+.++-..
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 4466554 5556654 567899999999999887543
No 175
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=44.05 E-value=31 Score=28.64 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=29.6
Q ss_pred HHHHHhhcCCCCEEEecCCCc------hHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP------WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~------~~~~ia~~l~iP~v~~~~~ 149 (383)
.+.+.+++.+||+||+..... .+..+|+.||+|.+.....
T Consensus 104 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 104 ILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 344445556799999776542 5899999999999987643
No 176
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=44.04 E-value=20 Score=30.40 Aligned_cols=35 Identities=6% Similarity=0.051 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|++|++. |+.|.+- ..++++|.++||+|++++-..
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECCC
Confidence 3455554 5556664 567899999999999887543
No 177
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=43.91 E-value=31 Score=27.99 Aligned_cols=39 Identities=21% Similarity=0.151 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+. +.++++ ++.|-+- ..++++|+++||+|+++.-
T Consensus 1 m~~~~~~-~~vlVt-GasggiG--~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 1 MEIKLQG-KVSLVT-GSTRGIG--RAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CCCCCTT-CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CccccCC-CEEEEE-CCCchHH--HHHHHHHHHCCCEEEEEeC
Confidence 4443344 444554 4445443 6789999999999988764
No 178
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.82 E-value=23 Score=30.35 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++|+||.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 457899998655444 5679999999999998754
No 179
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=43.73 E-value=21 Score=30.34 Aligned_cols=37 Identities=8% Similarity=-0.121 Sum_probs=27.7
Q ss_pred cEEEEEcCCCccc---HHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGH---MIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH---~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+||+++..+.... ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899998874321 233467999999999999988764
No 180
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=43.67 E-value=28 Score=28.85 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=31.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
..|++..-|+.|-..-...||..|+++|++|.++-.+..
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q 40 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 456676666788899999999999999999998866544
No 181
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=43.49 E-value=37 Score=28.01 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+. ++++++-.+ |-+- ..++++|+++||+|+++.-
T Consensus 1 M~~~l~~-k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 1 MSGRLTG-KVALVSGGA-RGMG--ASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp -CCTTTT-CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCC-CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4333333 445555443 4333 6789999999999988754
No 182
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=43.45 E-value=26 Score=27.48 Aligned_cols=39 Identities=8% Similarity=0.192 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCcccHHHH-HHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPI-VDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~-~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+|+||+++-.. .|+..-+ ..+++.|.+.|++|.++.-..
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 35688877777 8876544 345666777899998886544
No 183
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=43.45 E-value=41 Score=24.72 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=25.7
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHH-------hCCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAK-------FGIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~-------l~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .|..+.+. .++|.|.++..
T Consensus 43 al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 43 AVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 34556778899999998654 35555543 35787776643
No 184
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=43.45 E-value=17 Score=33.62 Aligned_cols=34 Identities=24% Similarity=0.129 Sum_probs=27.3
Q ss_pred HHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEE
Q 036871 109 EPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLV 145 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~ 145 (383)
.++++.+++.+||++|.... +..+|+++|||++.
T Consensus 391 ~el~~~i~~~~pDL~ig~~~---~~~~a~k~gIP~~~ 424 (483)
T 3pdi_A 391 RVLLKTVDEYQADILIAGGR---NMYTALKGRVPFLD 424 (483)
T ss_dssp HHHHHHHHHTTCSEEECCGG---GHHHHHHTTCCBCC
T ss_pred HHHHHHHHhcCCCEEEECCc---hhHHHHHcCCCEEE
Confidence 35667777889999998654 67889999999874
No 185
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=43.37 E-value=31 Score=27.85 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=29.3
Q ss_pred EEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 9 HVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 9 ~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.|++.+. ++.|-..-...||..|+++|++|.++-.+..
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT 42 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 3444333 3668888899999999999999999887653
No 186
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=43.11 E-value=71 Score=28.93 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=33.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCCCCc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFAS-RGVKASVITTPANGP 48 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~-rGH~Vt~~~~~~~~~ 48 (383)
.--+++.--|+.|-..-.+.+|...+. .|..|.+++.+...+
T Consensus 200 G~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 200 GSLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp TCEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 335667777888999999999999887 489999998876543
No 187
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=42.72 E-value=30 Score=29.74 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 13 ~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 3466554 5556654 67889999999999988754
No 188
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.68 E-value=27 Score=25.62 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+.||+++=.+..| ..+++.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4588888654433 578999999999999998743
No 189
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=42.25 E-value=39 Score=25.09 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=56.2
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccccch
Q 036871 11 FFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDAITN 90 (383)
Q Consensus 11 l~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (383)
++++..- .+=.-++.+++.|.+.|+++. .| ......+++. |+....+.. ..++.. ..
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~-AT-~GTa~~L~~~---------Gi~v~~v~k------~~egg~-~~---- 83 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF-AT-EATSDWLNAN---------NVPATPVAW------PSQEGQ-NP---- 83 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE-EE-HHHHHHHHHT---------TCCCEEECC------GGGC---------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE-EC-chHHHHHHHc---------CCeEEEEEe------ccCCCc-cc----
Confidence 4555443 456668899999999999843 33 2333344443 565555521 111100 00
Q ss_pred hhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC--------chHHHHHHHhCCCcEE
Q 036871 91 EVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF--------PWATDAAAKFGIPRLV 145 (383)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~--------~~~~~ia~~l~iP~v~ 145 (383)
..+.+.+.+++.+.|+||.-... +.-...|-..+||++.
T Consensus 84 ----------------~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 84 ----------------SLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp -----------------CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ----------------ccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 01356788999999999975432 1234557788999774
No 190
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=42.20 E-value=20 Score=29.12 Aligned_cols=40 Identities=20% Similarity=0.105 Sum_probs=26.7
Q ss_pred HHHHHhhc--CCCCEEEecCCCch-------HHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRD--HKPDCLVADIFFPW-------ATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~--~~~D~vi~d~~~~~-------~~~ia~~l~iP~v~~~~~ 149 (383)
.+.+.+++ .+||++++|..... |..+...+++|.|.+.=+
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 44444454 47999999986553 344555669999987543
No 191
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=42.10 E-value=57 Score=22.86 Aligned_cols=38 Identities=11% Similarity=0.142 Sum_probs=27.2
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|...+++.+|+++- .+-.-...+.+.|.+.|++|+.+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeC
Confidence 66667778999885 455556778888889999987644
No 192
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=41.80 E-value=38 Score=26.79 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
...++++.++..|...-+..+++.|+++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666677777777899999999999999876553
No 193
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=41.62 E-value=46 Score=23.82 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=25.0
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .|..+.+.+ .+|.+.++..
T Consensus 39 al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 39 CLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 33455667899999998654 355555443 4677766543
No 194
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=41.43 E-value=24 Score=30.39 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=26.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+||+++=.|+.|- .+|..|+++||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 4899997776663 56889999999999998754
No 195
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=41.42 E-value=53 Score=22.91 Aligned_cols=40 Identities=23% Similarity=0.418 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
...+.+++.++|+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 38 ~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 38 AFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 344556677899999998654 355555443 5787776654
No 196
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=41.40 E-value=25 Score=30.82 Aligned_cols=36 Identities=8% Similarity=0.072 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTP 44 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~ 44 (383)
++|++|++. |+.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 22 m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 345676654 5666665 5788999998 9999998754
No 197
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=41.35 E-value=17 Score=26.45 Aligned_cols=33 Identities=9% Similarity=0.090 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++.+|+++=. |.+- ..+++.|.++|++|+++..
T Consensus 5 ~~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 5 KNKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp -CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEES
T ss_pred cCCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4557887753 4443 4678999999999988765
No 198
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=41.00 E-value=47 Score=26.84 Aligned_cols=39 Identities=8% Similarity=0.053 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+..+ ++++ ++.|-+ =..++++|+++|++|+++.-
T Consensus 1 M~~~l~~k~-vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 1 MELFLAGRR-VLVT-GAGKGI--GRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp CCCCCTTCE-EEEE-STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCcE-EEEE-CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 333334434 4444 333444 36788999999999988764
No 199
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=40.70 E-value=17 Score=33.73 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEE
Q 036871 109 EPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLV 145 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~ 145 (383)
.++++.+++.+||++|.... +..+|+++|||++.
T Consensus 407 ~el~~~i~~~~pDL~ig~~~---~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 407 YEFEEFVKRIKPDLIGSGIK---EKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHHHHHCCSEEEECHH---HHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCcEEEeCcc---hhHHHHHcCCCEEe
Confidence 35566677789999998643 67899999999885
No 200
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=40.56 E-value=22 Score=31.47 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=23.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
+||+|+=-+-.| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 588888665444 678889999999999984
No 201
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=40.55 E-value=34 Score=26.74 Aligned_cols=38 Identities=18% Similarity=0.400 Sum_probs=29.9
Q ss_pred EEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 9 HVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 9 ~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.|++. +-++.|=..-...||..|+++|++|.++-.+..
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34444 334778888999999999999999999987654
No 202
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.53 E-value=35 Score=29.35 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++++|.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 45699999776666 5688999999999998754
No 203
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=40.53 E-value=84 Score=27.67 Aligned_cols=41 Identities=7% Similarity=-0.044 Sum_probs=33.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCcc
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPY 49 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~ 49 (383)
-+++.--++.|-..-.+.++..++.+|..|.|+..+...+.
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~~ 116 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDP 116 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCH
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChhH
Confidence 46667777889999999999999999999999998765443
No 204
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=40.37 E-value=45 Score=27.55 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=24.6
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|..+.+. |+++++-++ |-+ =..++++|+++||+|+++.-
T Consensus 1 M~~m~~~-k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNG-KVALVTGAA-QGI--GRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTT-CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCC-CEEEEECCC-CcH--HHHHHHHHHHCCCEEEEEEC
Confidence 4443333 445555444 433 36789999999999988764
No 205
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=40.32 E-value=38 Score=28.80 Aligned_cols=41 Identities=10% Similarity=0.043 Sum_probs=32.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
++..|++..-++.|=..-...||..|+++|++|.++-.+..
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~~ 80 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 80 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 34456666566778899999999999999999999876654
No 206
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=40.30 E-value=36 Score=28.60 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=22.8
Q ss_pred CCCCCCcEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 2 GSKVPQLHVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 2 ~~~~~~~~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.....+.+||++ ++|- -=..-.-.+...++++|++|++++-
T Consensus 2 ~~~~~~~rvLvv~aHPD-De~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 2 PHDPGATRLLAISPHLD-DAVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp ------CEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCCCCCCEEEEEeCCC-hHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 333334566644 4443 2244455666777889999998874
No 207
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=40.27 E-value=43 Score=27.31 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=24.5
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+. |+++++-++ |-+ =..++++|+++|++|+++.-
T Consensus 1 m~~~l~~-k~~lVTGas-~gI--G~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 1 MPSALQG-KVALITGAS-SGI--GEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp --CTTTT-CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCccCCC-CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4443333 455555444 433 36789999999999988764
No 208
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=40.26 E-value=39 Score=27.97 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=29.1
Q ss_pred CCcEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 6 PQLHVFFFPFM-AHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 6 ~~~~il~~~~~-~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
+|..|++.... ..|=..-...|++.|+++|++|.++=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 45455555555 55888889999999999999999875
No 209
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=40.11 E-value=50 Score=27.46 Aligned_cols=39 Identities=13% Similarity=0.315 Sum_probs=30.0
Q ss_pred CcEEEEEeCCcccCCHhhHHHHHHHHHhC--CCcEEEEEec
Q 036871 286 NSVVYICFGSIANFTSAQLMEIATGLEAS--RRNFIWVVRR 324 (383)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~a~~~~--~~~viw~~~~ 324 (383)
+++|+|++||......+.+..+.+.+++. +..|-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 57999999998765656777777777664 5678888765
No 210
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=40.00 E-value=47 Score=28.37 Aligned_cols=39 Identities=8% Similarity=-0.099 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCcc-c---HHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHG-H---MIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~g-H---~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++||+++..+..+ | +..-..++++|.++||+|+.+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4589988876433 2 4567899999999999999988543
No 211
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=39.88 E-value=37 Score=28.69 Aligned_cols=39 Identities=10% Similarity=0.261 Sum_probs=29.8
Q ss_pred CCCcEEEEEcCCCcccHHH--HHHHHHHHHhCC-CeEEEEeCC
Q 036871 5 VPQLHVFFFPFMAHGHMIP--IVDMAKLFASRG-VKASVITTP 44 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p--~~~la~~L~~rG-H~Vt~~~~~ 44 (383)
.++.|||++ .+..+|-.+ ...|++.|.+.| .+|++....
T Consensus 2 ~~~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 367899999 444488644 468888888898 999999864
No 212
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.85 E-value=27 Score=31.97 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=26.9
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~ 146 (383)
++++.+++.++|++|.+.. +..+|+++|||++.+
T Consensus 376 ~l~~~i~~~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNEGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHSCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhcCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 4556677789999998764 578899999998874
No 213
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=39.82 E-value=61 Score=24.89 Aligned_cols=39 Identities=5% Similarity=0.002 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+..|.+.-..+.|-..-+..|++.|.++|++|.++....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 445666666688999999999999999999999888654
No 214
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=39.66 E-value=37 Score=28.51 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=32.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
|..|+|..-|+.|-..-...||..|+++|++|.++-.+..
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~q 41 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4456676666889999999999999999999998876554
No 215
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=39.62 E-value=33 Score=29.17 Aligned_cols=35 Identities=9% Similarity=0.050 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++++|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 11 ~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 11 GSMRALIT--GVAGFVG--KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp --CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcceEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 44455443 5556654 67899999999999987643
No 216
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=39.55 E-value=59 Score=26.18 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGH----MIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH----~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.+|.+|.++.....+. ..-...|++.|+++|+.|+.-..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3566799995554432 34567889999999998765444
No 217
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=39.50 E-value=29 Score=29.48 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|+||.|+=.+.-|. .+|+.|+++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 467999997766554 678999999999998854
No 218
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=39.47 E-value=60 Score=22.81 Aligned_cols=39 Identities=26% Similarity=0.345 Sum_probs=24.5
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEec
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHG 148 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~ 148 (383)
...+.+++.+||+||.|.... .+..+.+.+ ++|.|.++.
T Consensus 38 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 38 SGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 334455667899999998654 344444321 577777654
No 219
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=39.44 E-value=16 Score=29.41 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++|+||+|+=.+..| ..+|+.|+++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 346789888655444 4688999999999988554
No 220
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=39.36 E-value=51 Score=24.07 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecch
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGTS 150 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~~ 150 (383)
...+.+++.+||+||.|.... .+..+.+.+ ++|.|.++...
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 334555677899999998654 355444433 67877776543
No 221
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=39.30 E-value=53 Score=23.74 Aligned_cols=33 Identities=12% Similarity=-0.098 Sum_probs=24.0
Q ss_pred EEcCCCcc--cHHHHHHHHHHHHhCCCeE-EEEeCC
Q 036871 12 FFPFMAHG--HMIPIVDMAKLFASRGVKA-SVITTP 44 (383)
Q Consensus 12 ~~~~~~~g--H~~p~~~la~~L~~rGH~V-t~~~~~ 44 (383)
+++.+.+| ....-+.+|.++.+.||+| .++-..
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 44444444 3566788999999999999 877653
No 222
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=39.19 E-value=80 Score=30.29 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
++.+.|++.++|++|+=.+. .....+-+.....++-++++
T Consensus 66 ~~~~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 LWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 34566777899999876553 34555656666667777776
No 223
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=38.77 E-value=26 Score=29.82 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++.+|.|+=.+.-|+ .+|..|+++||+|+++...
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 456899887766554 5788999999999987653
No 224
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=38.65 E-value=25 Score=31.92 Aligned_cols=36 Identities=11% Similarity=0.027 Sum_probs=24.3
Q ss_pred CCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 2 GSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 2 ~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.+.+++||.++=.|..|. .+|..|++ ||+|+++-.
T Consensus 31 ~r~~~~mkIaVIGlG~mG~-----~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 31 GRGSEFMKITISGTGYVGL-----SNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp ----CCCEEEEECCSHHHH-----HHHHHHHT-TSEEEEECS
T ss_pred ccccCCCEEEEECcCHHHH-----HHHHHHHc-CCeEEEEec
Confidence 3445677999987665553 46777887 999998764
No 225
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=38.64 E-value=56 Score=23.30 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=24.0
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|...+++.+|+++- .+-.-...+.+.|.+.|++|..+.
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISAD 38 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeC
Confidence 55556777888874 455556778888888898876444
No 226
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=38.60 E-value=34 Score=29.38 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=23.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++|++. |+.|.+- ..|+++|+++||+|+.+.-.
T Consensus 4 ~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 355443 5556654 57899999999999988643
No 227
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=38.57 E-value=17 Score=31.99 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+||+|+=.|..| ..+|..|+++||+|+++..
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 3489998776655 4578999999999998864
No 228
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.52 E-value=26 Score=26.53 Aligned_cols=37 Identities=11% Similarity=0.179 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
..+++++..++ | +-|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 45788887775 3 899999999999999999998 5443
No 229
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=38.50 E-value=19 Score=31.69 Aligned_cols=39 Identities=3% Similarity=-0.141 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCc-cc---HHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAH-GH---MIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~-gH---~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++||+++..|.. =| +..-.+++++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 34569988855532 24 34456789999999999988753
No 230
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=38.48 E-value=44 Score=27.99 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=23.6
Q ss_pred CCCCCCCcEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|.+.....+||++ ++|- -=..-+-.+...++++|++|++++-
T Consensus 1 ~~~~~~~~rvLvv~aHPD-De~l~~GGtia~~~~~G~~V~vv~~ 43 (270)
T 3dfi_A 1 MLQDADRTRILAISPHLD-DAVLSVGASLAQAEQDGGKVTVFTV 43 (270)
T ss_dssp -----CCSEEEEEESSTT-HHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCCEEEEEeCCc-hHHHhhHHHHHHHHhCCCeEEEEEE
Confidence 3333344566644 4442 2344455667778889999998774
No 231
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=38.24 E-value=97 Score=25.25 Aligned_cols=39 Identities=15% Similarity=0.045 Sum_probs=24.4
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+. |+++++.++. -+ =.+++++|+++|++|.++.-
T Consensus 1 M~~~~~~-k~vlVTGas~-GI--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 1 MSLTPRN-ATVAVIGAGD-YI--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp ----CCS-CEEEEECCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCCC-CEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 4433333 5566665553 33 36899999999999888764
No 232
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=38.11 E-value=55 Score=22.47 Aligned_cols=37 Identities=24% Similarity=0.365 Sum_probs=24.2
Q ss_pred HHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 113 QLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+.+++.++|+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 41 ~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 41 EKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred HHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 344556899999998655 355555443 5787776654
No 233
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=37.99 E-value=31 Score=30.56 Aligned_cols=38 Identities=11% Similarity=-0.015 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcc-c---HHHHHHHHHHH-HhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHG-H---MIPIVDMAKLF-ASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~g-H---~~p~~~la~~L-~~rGH~Vt~~~~~ 44 (383)
++||+++..+..+ | +..-..++++| .++||+|+.+-..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 5689999776444 4 34568889999 9999999988643
No 234
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=37.72 E-value=55 Score=26.84 Aligned_cols=32 Identities=9% Similarity=0.040 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-.+ |-+ =..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGS-SGL--GFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555444 433 36899999999999988764
No 235
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=37.69 E-value=35 Score=28.12 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=30.3
Q ss_pred CcEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 7 QLHVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 7 ~~~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
+..|++. .-++.|-..-...||..|+++|++|.++-.+..
T Consensus 6 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 6 VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3344444 234668888899999999999999999877654
No 236
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=37.67 E-value=57 Score=23.31 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=25.2
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+..+.+++.++|+||.|. .. .+..+.+.+ ++|.|.++..
T Consensus 39 ~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 39 EAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 344556678899999998 54 244444432 5888877654
No 237
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=37.64 E-value=20 Score=30.85 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCC
Q 036871 24 IVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 24 ~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
=.++|+++.+||++||++..+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 35789999999999999997654
No 238
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=37.61 E-value=75 Score=21.52 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=24.7
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 37 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 37 ALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 33455667899999998654 355554433 4677766543
No 239
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=37.61 E-value=37 Score=31.72 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=23.5
Q ss_pred CCeEecCcccHHH---hhcCCCceeec--c-ccccchhccC
Q 036871 349 KGLIIRGWAPQVL---ILDHEAVGGFV--T-HCGWNSTIEA 383 (383)
Q Consensus 349 ~nv~~~~~~Pq~~---lL~~~~~~~fI--t-HGG~~s~~Ea 383 (383)
++|++..++|+.+ ++..+++ || + .|+.+++.||
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEA 472 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDA 472 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHH
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHH
Confidence 7899999998654 5778888 76 2 2555566665
No 240
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=37.54 E-value=94 Score=21.84 Aligned_cols=38 Identities=11% Similarity=0.015 Sum_probs=30.7
Q ss_pred CCCcEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEe
Q 036871 5 VPQLHVFFFPFMAHGHMIP-IVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p-~~~la~~L~~rGH~Vt~~~ 42 (383)
+++.||++++..+.|.-.- ..+|-+.+.++|.++.+-+
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4577999999999998774 7888888999999875544
No 241
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=37.48 E-value=50 Score=27.78 Aligned_cols=38 Identities=5% Similarity=-0.057 Sum_probs=27.7
Q ss_pred cEEEEEcCCCc-ccHH---HHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAH-GHMI---PIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~-gH~~---p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+||+++..+.. -|-. .-..++++|.++||+|.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 48888876532 2322 34689999999999999888753
No 242
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=37.46 E-value=48 Score=26.69 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccc--HHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVFFFPFMAHGH--MIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il~~~~~~~gH--~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
...+++-++..|+ ..-+..+++.|.++|++|..+-
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 3456666777777 6778899999999999987654
No 243
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=37.42 E-value=57 Score=26.82 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....+. |+++++-.+ |-+ =..++++|+++|++|+++.-
T Consensus 1 m~~~l~~-k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 1 MDMGISG-KVAVITGSS-SGI--GLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CCCCCTT-CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCC-CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcC
Confidence 4433333 445555444 433 36899999999999988764
No 244
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.27 E-value=61 Score=23.54 Aligned_cols=42 Identities=17% Similarity=0.133 Sum_probs=27.9
Q ss_pred HHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 108 QEPLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 108 ~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+..+.+++.+||+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 55 ~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 55 GQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 34555667788999999998654 355555433 5777776654
No 245
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=37.25 E-value=39 Score=27.76 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=28.5
Q ss_pred CCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 6 PQLHVFFFPFM--AHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 6 ~~~~il~~~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
+|.+.++++.. ..|=..-...|++.|+++|.+|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45555554444 55788889999999999999999875
No 246
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=37.16 E-value=59 Score=22.36 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=25.6
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l----~iP~v~~~~~ 149 (383)
...+.+++.++|+||.|.... .|..+.+.+ .+|.+.++..
T Consensus 37 ~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 37 GLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 334455667899999998654 355555544 4676666543
No 247
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=37.12 E-value=33 Score=29.40 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=26.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++|+++..+ .-..++++|.++||+|.++....
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 489988876 46789999999999999887643
No 248
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=37.01 E-value=72 Score=28.80 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=23.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.||+++-. | ..-..+++++.+.|++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHHcCCEEEEEecc
Confidence 46777642 2 24567899999999999988754
No 249
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=36.85 E-value=42 Score=27.71 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=31.1
Q ss_pred CcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 7 QLHVFFFPFM--AHGHMIPIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 7 ~~~il~~~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
+.+++.+..+ +.|=..-...||..|+++|++|.++-.+...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4455544433 6688888999999999999999988776554
No 250
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=36.58 E-value=35 Score=28.07 Aligned_cols=38 Identities=8% Similarity=0.095 Sum_probs=29.5
Q ss_pred EEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 9 HVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 9 ~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.|+++ .-++.|-..-...||..|+++|++|.++-.+..
T Consensus 4 ~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 4 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 34443 344678889999999999999999999876653
No 251
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.46 E-value=57 Score=23.22 Aligned_cols=39 Identities=8% Similarity=0.111 Sum_probs=25.0
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 42 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 42 ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 34455667899999998654 355555432 5677766544
No 252
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=36.36 E-value=44 Score=28.60 Aligned_cols=34 Identities=12% Similarity=0.259 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.++|++. |+.|.+- ..|+++|+++||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 34455543 5556554 6789999999999998875
No 253
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=36.21 E-value=65 Score=26.31 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=27.8
Q ss_pred HHHHHHhhc--CCCCEEEecCCCc-------hHHHHHHHhCCCcEEEecc
Q 036871 109 EPLEQLLRD--HKPDCLVADIFFP-------WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 109 ~~l~~~l~~--~~~D~vi~d~~~~-------~~~~ia~~l~iP~v~~~~~ 149 (383)
+.+.+.+++ .+||++++|..-. .|..+.-.+++|.|.+.=+
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 344444444 5799999998643 2555666789999987543
No 254
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=36.12 E-value=2e+02 Score=24.28 Aligned_cols=107 Identities=8% Similarity=0.070 Sum_probs=61.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
+++||+++.++. || .+.+|..+-.+. ..+|.++.+..-.. +.... ...++.+..++.. .
T Consensus 87 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~A-----~~~gIp~~~~~~~---------~- 147 (287)
T 3nrb_A 87 DRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSVS-----LVGDIPFHYLPVT---------P- 147 (287)
T ss_dssp CCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCCC-----CCTTSCEEECCCC---------G-
T ss_pred CCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHHH-----HHcCCCEEEEecc---------C-
Confidence 467999998887 43 345555555443 36777766543221 11110 1236666655311 0
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
.. . ....+++.+.|++.++|+||.=.+. .....+-+.+.-..+-++++
T Consensus 148 -----~~----r---------~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 -----AT----K---------AAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp -----GG----H---------HHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred -----cc----h---------hhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 00 0 0124567788888899999876554 35666777777777776654
No 255
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=36.10 E-value=37 Score=27.04 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.+++|.++=.+..| ..+|..|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46688888655444 5678999999999998854
No 256
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=36.04 E-value=37 Score=28.15 Aligned_cols=36 Identities=6% Similarity=-0.017 Sum_probs=27.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..+++-++..|+..-+..+++.|.++|++|..+--.
T Consensus 47 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 47 RTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 455555666677777889999999999998876653
No 257
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=36.00 E-value=56 Score=26.90 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCc--ccHHHHH-HHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAH--GHMIPIV-DMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~--gH~~p~~-~la~~L~~rGH~Vt~~~~ 43 (383)
+.++||+++..... |...-+. .+++.|.+.|++|.++--
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 35678887766543 5554444 466777778999887653
No 258
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=35.99 E-value=25 Score=29.84 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++||.|+=.+.-|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 45899997776663 678999999999998854
No 259
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=35.95 E-value=22 Score=29.66 Aligned_cols=31 Identities=16% Similarity=0.106 Sum_probs=23.9
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCeEEEE
Q 036871 11 FFFPFMAHGHMIPIVDMAKLFASRGVKASVI 41 (383)
Q Consensus 11 l~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~ 41 (383)
+++-+|..|+-.-+..+++.|+++|++|..+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3445676677777889999999999997654
No 260
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=35.89 E-value=55 Score=26.67 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=22.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-.+ |-+- ..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGA-NGIG--RAIAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEcC
Confidence 455555444 4443 6799999999999988764
No 261
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=35.77 E-value=28 Score=30.64 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++||.|+=.+..|. .+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 356899998877764 5789999999999988763
No 262
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=35.77 E-value=49 Score=26.72 Aligned_cols=36 Identities=3% Similarity=-0.015 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccc--HHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGH--MIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH--~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..++++-++..|+ ...+..+++.|+++|+.|..+--
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 4566666666655 66688999999999999876654
No 263
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.71 E-value=2e+02 Score=24.29 Aligned_cols=106 Identities=8% Similarity=0.133 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCE 83 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (383)
+++||+++.++. || .+.+|..+-.+- +.+|.++.+..-. +..... ..++.+..+|.. ..
T Consensus 94 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~--~~~~A~-----~~gIp~~~~~~~---------~~ 154 (292)
T 3lou_A 94 ARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPD--FAPLAA-----QHGLPFRHFPIT---------AD 154 (292)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSST--THHHHH-----HTTCCEEECCCC---------SS
T ss_pred CCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHH--HHHHHH-----HcCCCEEEeCCC---------cC
Confidence 467999998887 54 455666655443 4687776653321 111111 237777666421 00
Q ss_pred cccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 84 NLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
.. . ...+++.+.|++.++|+||.=.+. .....+-+.+.-..+-++++
T Consensus 155 -----~r----~----------~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 155 -----TK----A----------QQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp -----CH----H----------HHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -----CH----H----------HHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 00 0 023467788888899999876554 35666777777777776654
No 264
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=35.67 E-value=37 Score=28.59 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++.||+++=.+.-| ..+|..|+++||+|+++..
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 45689998544433 5689999999999998754
No 265
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.58 E-value=30 Score=29.75 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEE
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVI 41 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~ 41 (383)
.++||+++=.|+.| ..+|..|+++||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46689999777766 45788999999999999
No 266
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.43 E-value=53 Score=23.98 Aligned_cols=40 Identities=20% Similarity=0.340 Sum_probs=26.0
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 49 ~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 49 QALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC
Confidence 444556678899999998654 355554433 5777766544
No 267
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=35.41 E-value=40 Score=29.79 Aligned_cols=35 Identities=9% Similarity=0.051 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+++++|++. |+.|-+- ..|+++|+++||+|+++.-
T Consensus 9 ~~~~~vlVT--G~tGfIG--~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 9 HHGSRVMVI--GGDGYCG--WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp ---CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCeEEEe--CCCcHHH--HHHHHHHHhCCCeEEEEEe
Confidence 457777754 5556665 5678999999999998853
No 268
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=35.30 E-value=1e+02 Score=23.96 Aligned_cols=39 Identities=13% Similarity=0.037 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.++||+++-.+...- .-+....+.|.+.|++|++++...
T Consensus 22 ~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 466899998876543 346677888999999999998754
No 269
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=35.11 E-value=45 Score=29.32 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+|++|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGFIA--SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccHHH--HHHHHHHHHCCCeEEEEECC
Confidence 35566554 5556554 57889999999999988754
No 270
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=35.07 E-value=58 Score=25.72 Aligned_cols=40 Identities=8% Similarity=0.124 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCcccHHH-HHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIP-IVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p-~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+|+||+++-....|+..- ...+++.|.+.|++|.++.-..
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 466888776665777554 4456677777899998877543
No 271
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=35.05 E-value=70 Score=26.30 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=21.4
Q ss_pred CCCEEE-ecCCC-chHHHHHHHhCCCcEEE
Q 036871 119 KPDCLV-ADIFF-PWATDAAAKFGIPRLVF 146 (383)
Q Consensus 119 ~~D~vi-~d~~~-~~~~~ia~~l~iP~v~~ 146 (383)
++|+|+ .+.-. ..+..+|+.+++|++..
T Consensus 100 ~~DvIvg~~~gGi~~A~~lA~~L~~p~~~v 129 (243)
T 3dez_A 100 EVEVIAGTATAGIPHGAIIADKMNLPLAYI 129 (243)
T ss_dssp TCCEEEEETTTTHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEecCchHHHHHHHHHHcCCCEEEE
Confidence 789998 44433 36888999999998764
No 272
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=35.01 E-value=22 Score=28.97 Aligned_cols=19 Identities=11% Similarity=0.287 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 036871 25 VDMAKLFASRGVKASVITT 43 (383)
Q Consensus 25 ~~la~~L~~rGH~Vt~~~~ 43 (383)
+.+|..|+++|++|+++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 6789999999999999864
No 273
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=34.99 E-value=44 Score=25.56 Aligned_cols=39 Identities=23% Similarity=0.311 Sum_probs=29.8
Q ss_pred CcEEEEEcCC--Ccc-cHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFM--AHG-HMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~--~~g-H~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..+|+++|.- +-. =..+...|++.|.++|.+|.|..++-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4477777654 112 25689999999999999999999864
No 274
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=34.90 E-value=34 Score=27.16 Aligned_cols=35 Identities=14% Similarity=-0.026 Sum_probs=27.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
.+.+++-++..|+-.-+..+++.|.++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 35666777777787788999999999999976543
No 275
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=34.88 E-value=81 Score=22.55 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=26.0
Q ss_pred HHHHHhhcCCCCEEEecCCCch--HHHHHHHh-------CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFPW--ATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~--~~~ia~~l-------~iP~v~~~~~ 149 (383)
+..+.+++.++|+||.|..... +..+.+.+ ++|.|.++..
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 42 KALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 3445567788999999986552 55554432 4677776643
No 276
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=34.87 E-value=46 Score=28.71 Aligned_cols=35 Identities=3% Similarity=-0.099 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+++|++. |+.|.+- ..|+++|.++||+|+.+.-..
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECCS
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCCC
Confidence 4466553 5667665 578999999999999987543
No 277
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=34.87 E-value=72 Score=25.67 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcc----cHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHG----HMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~g----H~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|.+|.++.....+ +..-...|++.|+++|+.|+.-..
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 46679988544332 345678899999999998755444
No 278
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=34.80 E-value=58 Score=23.12 Aligned_cols=40 Identities=20% Similarity=0.336 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCCEEEecCCCc---hHHHHHHH----hCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP---WATDAAAK----FGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~---~~~~ia~~----l~iP~v~~~~~ 149 (383)
+..+.+++.++|+||.|.... .+..+.+. .++|.|.++..
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~ 91 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSS 91 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 334445566899999997543 34444443 37888877654
No 279
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=34.64 E-value=35 Score=28.75 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|++|++. |+.|.+- ..++++|.++||+|++++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 4455544 4556554 46789999999999887754
No 280
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.55 E-value=28 Score=32.22 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.|+||+|+=.+..| +.+|+.|.++|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 46799998776555 467899999999999998654
No 281
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=34.51 E-value=45 Score=25.61 Aligned_cols=39 Identities=21% Similarity=0.354 Sum_probs=29.7
Q ss_pred CcEEEEEcCC--Cccc-HHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFM--AHGH-MIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~--~~gH-~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..+|+++|.- +-.. ..+...|++.|.++|.+|.|..++-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3477777654 2222 5689999999999999999999864
No 282
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=34.43 E-value=15 Score=31.38 Aligned_cols=35 Identities=11% Similarity=-0.035 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++.+|+++=.+..| +..|..|+++|++|+++-...
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 45688888776555 578888999999999997654
No 283
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=34.43 E-value=44 Score=28.69 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=22.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 3 ~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 3 KLLIT--GGCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred EEEEe--CCCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 54443 5556554 5788999999999998864
No 284
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=34.42 E-value=57 Score=23.07 Aligned_cols=40 Identities=18% Similarity=0.332 Sum_probs=25.6
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|.... -|..+.+.+ ++|.|.++..
T Consensus 40 ~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 344455667899999998654 355555443 4777776544
No 285
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=34.32 E-value=2.1e+02 Score=24.11 Aligned_cols=104 Identities=9% Similarity=0.111 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCCC---CCccchhhHhhhhhcCCCcceEeeeCCCccCCCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTPA---NGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPE 80 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 80 (383)
+++||+++.++. || .+.+|..+-.+- ..+|.++.+.. ..+..+ ..++.+..++..
T Consensus 88 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~---------~~gIp~~~~~~~-------- 147 (288)
T 3obi_A 88 TRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD---------FGDIPFYHFPVN-------- 147 (288)
T ss_dssp SCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT---------TTTCCEEECCCC--------
T ss_pred CCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH---------HcCCCEEEeCCC--------
Confidence 477999998887 44 345555554432 24776666533 122222 236776665311
Q ss_pred CCccccccchhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCC-chHHHHHHHhCCCcEEEecc
Q 036871 81 GCENLDAITNEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFF-PWATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~-~~~~~ia~~l~iP~v~~~~~ 149 (383)
.. . . .....++.+.|++.++|+||.=.+. .....+-+.+.-..+-++++
T Consensus 148 -~~------~----r---------~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 148 -KD------T----R---------RQQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -TT------T----H---------HHHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -cc------c----H---------HHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 00 0 0 0124467788888899999876554 35666777777777776654
No 286
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=34.17 E-value=71 Score=24.43 Aligned_cols=39 Identities=13% Similarity=-0.107 Sum_probs=28.5
Q ss_pred HHHHHHhhcCCCCEEEecCCCc---hHHHHHHHhCCCcEEEecc
Q 036871 109 EPLEQLLRDHKPDCLVADIFFP---WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~---~~~~ia~~l~iP~v~~~~~ 149 (383)
+.+.+.++ +||+||+..... .+..+|.++++|.+...+.
T Consensus 61 ~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~ 102 (166)
T 3fet_A 61 EGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFS 102 (166)
T ss_dssp HHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEEE
Confidence 34455555 899999887544 2677899999999987643
No 287
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=34.12 E-value=64 Score=27.82 Aligned_cols=86 Identities=15% Similarity=0.073 Sum_probs=48.5
Q ss_pred CcEEEEEeCCcccCCHhhHHHHHHHHHhCCC----cE-EEEEecCCCCCCchhhhccCchhHHHhhCCCCeEecCcccH-
Q 036871 286 NSVVYICFGSIANFTSAQLMEIATGLEASRR----NF-IWVVRRNKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAPQ- 359 (383)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~----~v-iw~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~Pq- 359 (383)
+..+++..|+... .+....+++|++.+.. .+ ++.++.+.. +.+.. -.++....++|++..+..+
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~----~~~~~----~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP----RKFEA----LAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC----HHHHH----HHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH----HHHHH----HHHHcCCCCcEEECCCcccH
Confidence 4467777887643 3556777888887642 22 344444321 22221 1111123567998887543
Q ss_pred HHhhcCCCceeecc----ccccchhccC
Q 036871 360 VLILDHEAVGGFVT----HCGWNSTIEA 383 (383)
Q Consensus 360 ~~lL~~~~~~~fIt----HGG~~s~~Ea 383 (383)
.+++..+++ +|. -|..+++.||
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea 290 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEA 290 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHH
Confidence 558888888 764 3455566664
No 288
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=34.05 E-value=47 Score=27.31 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=21.2
Q ss_pred cEEE-EEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVF-FFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il-~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
.+|+ +.+.|- --..-+-.....|+++|++|++++
T Consensus 4 ~~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 4 LHILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CSEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEE
Confidence 3454 555553 224445566677788999987765
No 289
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=33.95 E-value=69 Score=21.83 Aligned_cols=37 Identities=19% Similarity=0.465 Sum_probs=24.1
Q ss_pred HHhhcCCCCEEEecCCCc--hHHHHHHH----hCCCcEEEecc
Q 036871 113 QLLRDHKPDCLVADIFFP--WATDAAAK----FGIPRLVFHGT 149 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~--~~~~ia~~----l~iP~v~~~~~ 149 (383)
+.+++.+||+||.|.... .|..+.+. -.+|.+.++..
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (120)
T 2a9o_A 39 EQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAK 81 (120)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESC
T ss_pred HHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 344556899999998654 35544443 36887777654
No 290
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=33.80 E-value=73 Score=24.96 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=25.9
Q ss_pred EE-EEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HV-FFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~i-l~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|| +++..+...+-.....+++.|.++|++|.++.-
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 54 455555555677788999999999999887664
No 291
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=33.75 E-value=34 Score=29.20 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=22.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 2 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 2 NSILIC--GGAGYIG--SHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCcHHH--HHHHHHHHhCCCEEEEEeC
Confidence 355543 4445544 6789999999999998864
No 292
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=33.68 E-value=79 Score=21.70 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=24.5
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh----CCCcEEEecc
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF----GIPRLVFHGT 149 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l----~iP~v~~~~~ 149 (383)
.+.+++.++|+||.|.... -|..+.+.+ ++|.+.++..
T Consensus 40 ~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 40 HQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 3455667899999998654 355555443 5777766544
No 293
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=33.67 E-value=47 Score=27.19 Aligned_cols=32 Identities=22% Similarity=0.115 Sum_probs=22.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.++++ ++.|-+- ..++++|+++|++|+++.-
T Consensus 8 k~vlIT-GasggiG--~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVIT-GSSTGLG--KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChHH--HHHHHHHHHCCCEEEEEcC
Confidence 344554 4445443 6899999999999988764
No 294
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=33.63 E-value=52 Score=26.13 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=27.2
Q ss_pred EEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEE
Q 036871 9 HVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVI 41 (383)
Q Consensus 9 ~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~ 41 (383)
.|++... ++.|-..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3555554 57899999999999999999999885
No 295
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=33.59 E-value=51 Score=28.75 Aligned_cols=34 Identities=15% Similarity=-0.213 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|.+|+++..+ ..-..++++|.++||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578888544 346788999999999999887654
No 296
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=33.58 E-value=59 Score=22.65 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=24.5
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHH-------hCCCcEEEec
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAK-------FGIPRLVFHG 148 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~-------l~iP~v~~~~ 148 (383)
+..+.+++.+||+||.|.... .|..+.+. .++|.+.++.
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 444556678899999998654 35555543 2466666543
No 297
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=33.52 E-value=76 Score=26.74 Aligned_cols=38 Identities=8% Similarity=0.077 Sum_probs=23.6
Q ss_pred CCCcEEE-EEcCCCcccHHH--HHHHHHHHHhCCCeEEEEe
Q 036871 5 VPQLHVF-FFPFMAHGHMIP--IVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 5 ~~~~~il-~~~~~~~gH~~p--~~~la~~L~~rGH~Vt~~~ 42 (383)
++.+||| |+.+|-..-++- .....+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 3445676 555664333322 4557788899999999874
No 298
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=33.48 E-value=89 Score=21.87 Aligned_cols=38 Identities=8% Similarity=-0.085 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
.+++||++++..+-|--.-..++-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 35668887777766555566777777778899998855
No 299
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.46 E-value=37 Score=27.70 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=23.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+.++++ ++.|-+- ..++++|+++||+|+++.-.
T Consensus 8 k~vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGIG--LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChHH--HHHHHHHHHCCCEEEEECCC
Confidence 344444 4445554 57899999999999887653
No 300
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=33.46 E-value=50 Score=27.93 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=23.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+|++. |+.|-+- ..|+++|.++||+|+.++-.
T Consensus 4 ~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 4 KIAVT--GGTGFLG--QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE--CCCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 55544 5556554 56789999999999988764
No 301
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=33.35 E-value=70 Score=24.55 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCcccHHHHHH--HHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVD--MAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~--la~~L~~rGH~Vt~~~~~ 44 (383)
....+++-.+..|+...+.. +++.|.++|+.|..+-..
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 70 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCT
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCC
Confidence 34566667777788887887 599999999998776543
No 302
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=33.34 E-value=79 Score=22.07 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=23.5
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh------CCCcEEEec
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF------GIPRLVFHG 148 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l------~iP~v~~~~ 148 (383)
..+.+++.+||+||.|.... .+..+.+.+ ..|.|.+.+
T Consensus 42 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~ 87 (132)
T 3lte_A 42 AGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVS 87 (132)
T ss_dssp HHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEEC
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEe
Confidence 33455678899999998655 355555543 245555444
No 303
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.20 E-value=83 Score=22.87 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=27.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|...+++.+|+++- .+-.-...+...|.+.|++|..+.+
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 66667788999885 4455567788888889999886554
No 304
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=33.18 E-value=25 Score=29.42 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=23.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|++. |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 7 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 7 RVIIT--GANGQLG--KQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEE--STTSHHH--HHHHHHSCTTTEEEEEECT
T ss_pred EEEEE--CCCCHHH--HHHHHHHHhCCCEEEEecc
Confidence 66554 5556554 5788999999999998864
No 305
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=33.11 E-value=55 Score=26.51 Aligned_cols=21 Identities=29% Similarity=0.396 Sum_probs=15.9
Q ss_pred hHHHHHHHhhcCCCCEEEecC
Q 036871 107 LQEPLEQLLRDHKPDCLVADI 127 (383)
Q Consensus 107 ~~~~l~~~l~~~~~D~vi~d~ 127 (383)
....+.+.+++.+||+|++..
T Consensus 83 ~~~~l~~~ir~~~P~~V~t~~ 103 (227)
T 1uan_A 83 QRLKLAQALRRLRPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHHCEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCC
Confidence 345677788888999999643
No 306
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=32.96 E-value=61 Score=23.08 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=25.6
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh----CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l----~iP~v~~~~~ 149 (383)
..+.+++.+||+||.|.... .|..+.+.+ .+|.|.++..
T Consensus 40 al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 40 AIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 33455667899999998654 355555543 5787776554
No 307
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=32.96 E-value=59 Score=22.50 Aligned_cols=37 Identities=14% Similarity=0.372 Sum_probs=23.7
Q ss_pred HHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 113 QLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+.+++.+||+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 41 DIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 344556899999998654 355555433 5777776554
No 308
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=32.95 E-value=35 Score=26.89 Aligned_cols=36 Identities=3% Similarity=-0.093 Sum_probs=22.6
Q ss_pred CcEEEEE-cCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 7 QLHVFFF-PFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 7 ~~~il~~-~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|+||+++ .+|-.+.-.-..++++++.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 3466654 44443322456677888888899988765
No 309
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=32.95 E-value=91 Score=21.25 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=25.6
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
...+.+++.+||++|.|.... .|..+.+.+ .+|.+.++..
T Consensus 35 ~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 334455667899999998654 355454432 5777776654
No 310
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=32.93 E-value=33 Score=28.04 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.++||.|+=.|..|- .||+.|.++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 356999999988774 578999999999988765
No 311
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=32.65 E-value=36 Score=28.92 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=23.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++|++. |+.|.+- ..|+++|.++||+|+++..
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 4 QRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp EEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECCC
T ss_pred CEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEec
Confidence 466543 5666665 5678999999999887653
No 312
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=32.64 E-value=70 Score=28.08 Aligned_cols=34 Identities=9% Similarity=-0.203 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|.||+++-.+ ..-..++++|.+.||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578888764 235678888999999999888754
No 313
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=32.63 E-value=40 Score=27.24 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=30.3
Q ss_pred cEEE-EEc-CCCcccHHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 036871 8 LHVF-FFP-FMAHGHMIPIVDMAKLFASR-GVKASVITTPAN 46 (383)
Q Consensus 8 ~~il-~~~-~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~~ 46 (383)
.+++ +.. -++.|-..-...||..|+++ |++|.++-.+..
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 3444 443 34778899999999999999 999999887654
No 314
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=32.59 E-value=71 Score=22.91 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=23.1
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEe
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFH 147 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~ 147 (383)
.+.+++.+||+||.|.... .|..+.+.+ ++|.|.++
T Consensus 42 l~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 42 IQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp HHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 3455667899999998654 355555443 46666554
No 315
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=32.53 E-value=42 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..+++|.|+=.+..| ..+|+.|+++||+|++...
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 356799998555433 4678999999999998764
No 316
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=32.47 E-value=52 Score=28.20 Aligned_cols=35 Identities=26% Similarity=0.234 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++++|++. |+.|-+- ..|+++|+++||+|+.+.-.
T Consensus 20 ~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFIT--GICGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEe--CCccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 45566554 4445443 57889999999999988753
No 317
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=32.41 E-value=74 Score=22.44 Aligned_cols=39 Identities=15% Similarity=0.143 Sum_probs=24.7
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|....++.+|+++- .+-.-...+.+.|.+.|++|+.+..
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
Confidence 55555678898876 4555567788888888999876554
No 318
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.40 E-value=65 Score=25.65 Aligned_cols=48 Identities=13% Similarity=-0.040 Sum_probs=35.7
Q ss_pred hhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhCCCcEEEE
Q 036871 274 QECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEASRRNFIWV 321 (383)
Q Consensus 274 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~viw~ 321 (383)
+-+.+|+.+...+.++||..+|......+.+....+||++++..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 446677754445779999988776555677888999999999876554
No 319
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=32.39 E-value=58 Score=25.07 Aligned_cols=38 Identities=11% Similarity=-0.011 Sum_probs=27.4
Q ss_pred cEEEEEcCCCcc----cHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHG----HMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~g----H~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..|.++..-..+ +..-...|++.|+++|+.|+.-....
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~G 43 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQG 43 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSST
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhh
Confidence 457777666543 46678899999999998877655543
No 320
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=32.35 E-value=1.7e+02 Score=24.48 Aligned_cols=40 Identities=10% Similarity=0.109 Sum_probs=32.3
Q ss_pred HHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHhCCCcEEEe
Q 036871 108 QEPLEQLLRDHKPDCLVADIFFP--WATDAAAKFGIPRLVFH 147 (383)
Q Consensus 108 ~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~~ 147 (383)
...+.+.+++.+..+|+++..+. .+..+|+..|++.+.+.
T Consensus 217 l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 217 LKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 34677788899999999998766 46788999999987654
No 321
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.17 E-value=74 Score=23.26 Aligned_cols=39 Identities=5% Similarity=0.109 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|...+++.+|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 55556678999874 4556677788888889999876654
No 322
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=32.14 E-value=48 Score=23.96 Aligned_cols=64 Identities=11% Similarity=0.026 Sum_probs=36.2
Q ss_pred CcEEEEEeCCcccCCHhhHHHHHHHHHhC-C-CcEEEEEecC-CCCCCchhhhccCchhHHHhhCCCCeEecCccc
Q 036871 286 NSVVYICFGSIANFTSAQLMEIATGLEAS-R-RNFIWVVRRN-KNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAP 358 (383)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~a~~~~-~-~~viw~~~~~-~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~P 358 (383)
+.+|+++.||-.......+..+.+.+++. + ..|-+.+-.- ..+ .+.+.+++. ..+.|.+.++..
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le~~~~P--------sl~~~l~~l-g~~~v~v~Plfl 70 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRP--------MPDEAIREM-NCDIIYVVPLFI 70 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESSTTCSS--------CHHHHHHHC-CCSEEEEEECCS
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeeecCCCC--------CHHHHHHHc-CCCEEEEEeeee
Confidence 46999999997433334566677777654 3 4566664331 111 133333333 445677777644
No 323
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=32.08 E-value=1.2e+02 Score=23.40 Aligned_cols=40 Identities=8% Similarity=0.066 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++++||+++..+... ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345799999876544 4456777888999999999998754
No 324
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=32.06 E-value=56 Score=27.07 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.++++++-++ |-+ =..+|++|+++|++|+++..
T Consensus 25 ~~k~vlITGas-~gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGS-RGI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcC
Confidence 34677776655 433 36899999999999987754
No 325
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=32.03 E-value=80 Score=28.65 Aligned_cols=41 Identities=20% Similarity=0.404 Sum_probs=34.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGP 48 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~ 48 (383)
..|+++-.++.|-..-...||..|+++|++|.++..+.++.
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 35556666688999999999999999999999999887754
No 326
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=32.02 E-value=81 Score=22.17 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=24.8
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+.+++..+|+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 39 al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 39 GLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp HHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 34455667899999998654 355554432 5777776544
No 327
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=32.01 E-value=24 Score=31.04 Aligned_cols=39 Identities=5% Similarity=0.018 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCcc-cH---HHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHG-HM---IPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~g-H~---~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++||+++..+..+ |- ..-..++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 35688888765332 32 33477899999999999888643
No 328
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=31.93 E-value=52 Score=30.48 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++|++. |+.|-+- ..|+++|.++||+|+.++-.
T Consensus 147 ~m~VLVT--GatG~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAIT--GSRGLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5676654 5556655 57899999999999998754
No 329
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=31.90 E-value=55 Score=28.26 Aligned_cols=35 Identities=6% Similarity=-0.069 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
++++|++. |+.|-+- ..|+++|.++||+|+.+.-.
T Consensus 26 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLIT--GVAGFIG--SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34566554 5556554 57889999999999988753
No 330
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=31.78 E-value=51 Score=25.82 Aligned_cols=39 Identities=23% Similarity=0.311 Sum_probs=29.4
Q ss_pred CcEEEEEcCC--Ccc-cHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFM--AHG-HMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~--~~g-H~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..+|+|+|.- +-. =..+...|++.|.++|.+|.|..++-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3467777654 112 25678999999999999999999865
No 331
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=31.53 E-value=84 Score=26.16 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=31.4
Q ss_pred CcEEEEEcC--CCcccHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 7 QLHVFFFPF--MAHGHMIPIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 7 ~~~il~~~~--~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
..++++++. ++.|-..-...||..|+++|.+|.++-.+...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 345555544 46788888999999999999999998776543
No 332
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=31.51 E-value=36 Score=28.66 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+||.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 1 M~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 3578888666655 3568899999999998854
No 333
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=31.50 E-value=98 Score=23.22 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCcccHHHHH-HHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIV-DMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~-~la~~L~~rGH~Vt~~~~~~ 45 (383)
...+|+++=...+|+..-+. .+++.|.++|++|.++....
T Consensus 3 ~~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 34467766666678876654 67888999999998877654
No 334
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.43 E-value=54 Score=27.63 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+++||+|+=.+..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 356899997666554 458889999999987643
No 335
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=31.38 E-value=41 Score=29.03 Aligned_cols=31 Identities=13% Similarity=0.258 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+||.|+=.+..| ..+|..|+++||+|+++..
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 488888776655 5778999999999998865
No 336
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=31.35 E-value=71 Score=26.21 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-.+ |-+ =..+++.|+++|++|+++.-
T Consensus 8 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 8 KVCLVTGAG-GNI--GLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555544 433 36789999999999988764
No 337
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=31.34 E-value=69 Score=25.75 Aligned_cols=34 Identities=15% Similarity=-0.055 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~ 43 (383)
++++|++. ++.|-+- ..++++|.++ ||+|+.+.-
T Consensus 3 ~~~~ilVt--GasG~iG--~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVT--GASGRTG--QIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEE--STTSHHH--HHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEE--cCCcHHH--HHHHHHHHhcCCCcEEEEEEc
Confidence 34465554 4455543 5788999999 899998875
No 338
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=31.34 E-value=50 Score=28.20 Aligned_cols=37 Identities=8% Similarity=0.159 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCcccH-HHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHM-IPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~-~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|.||+++..+..++. .....+.+.|.++|++|.+...
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 568999999977764 4578899999999999887544
No 339
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=31.33 E-value=79 Score=25.58 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=22.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.++++-+ .|-+ =..++++|+++|++|+++.-
T Consensus 12 k~vlITGa-sggi--G~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGA-GSGI--GLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 45555544 3433 36889999999999988764
No 340
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=31.30 E-value=58 Score=27.98 Aligned_cols=38 Identities=24% Similarity=0.146 Sum_probs=31.6
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.+|++++. |+.|-..-...||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45655544 477999999999999999999999999876
No 341
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=31.30 E-value=65 Score=24.98 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=26.4
Q ss_pred cEEEEEcCCCcccHHHH-HHHHHHHHh-CCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPI-VDMAKLFAS-RGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~-~~la~~L~~-rGH~Vt~~~~~~ 45 (383)
+||+++-....|+..-+ ..+++.|.+ +|++|.++--..
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 47776666567776554 456677777 899999887654
No 342
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=31.19 E-value=32 Score=29.90 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCcc-c---HHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHG-H---MIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~g-H---~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++||+++..+..+ | +..-..++++|.++||+|+.+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 35688888755322 2 224567899999999999987653
No 343
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=31.17 E-value=66 Score=27.34 Aligned_cols=42 Identities=10% Similarity=0.063 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCccc---HHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 5 VPQLHVFFFPFMAHGH---MIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH---~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.+|.|++++..|..|. ..-...+...|.++|+++++..+...
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 4567888887775543 23456788889999999998876543
No 344
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=31.05 E-value=53 Score=25.81 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=29.5
Q ss_pred CcEEEEEcCC--Ccc-cHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFM--AHG-HMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~--~~g-H~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..+|+|+|.- +-. =..+...|++.|.++|.+|.|..++-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 3467777654 112 25678999999999999999999865
No 345
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=30.89 E-value=80 Score=26.00 Aligned_cols=32 Identities=6% Similarity=-0.005 Sum_probs=23.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++. -+ =..++++|+++|++|.++.-
T Consensus 11 k~~lVTGas~-gI--G~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGSTA-GI--GKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 5666666553 33 36789999999999988764
No 346
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=30.87 E-value=71 Score=23.27 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=26.7
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecch
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGTS 150 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~~ 150 (383)
...+.+++..+|+||.|.... .+..+.+.+ ++|.|.++...
T Consensus 38 ~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 38 EALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 444556677899999997554 344444432 68888776543
No 347
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=30.82 E-value=69 Score=22.69 Aligned_cols=40 Identities=20% Similarity=0.401 Sum_probs=25.2
Q ss_pred HHHHhhcCCCCEEEecCCCc-------hHHHHHHHh-----CCCcEEEecch
Q 036871 111 LEQLLRDHKPDCLVADIFFP-------WATDAAAKF-----GIPRLVFHGTS 150 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~-------~~~~ia~~l-----~iP~v~~~~~~ 150 (383)
..+.+++.++|+||.|.... .+..+.+.+ ++|.|.++...
T Consensus 39 a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 39 LSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 33455667899999997543 344444332 68888776543
No 348
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=30.80 E-value=58 Score=30.05 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+..||.|+=.+..| |.++|+.|.++|++|+..-.
T Consensus 21 ~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 21 RVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp -CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 34689999998776 66789999999999997643
No 349
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=30.68 E-value=74 Score=22.12 Aligned_cols=29 Identities=7% Similarity=0.099 Sum_probs=19.7
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF 139 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l 139 (383)
..+.+++.++|+||.|.... .|..+.+.+
T Consensus 43 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l 73 (129)
T 1p6q_A 43 GMKIMAQNPHHLVISDFNMPKMDGLGLLQAV 73 (129)
T ss_dssp HHHHHHTSCCSEEEECSSSCSSCHHHHHHHH
T ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHH
Confidence 33455667899999998654 366666554
No 350
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.66 E-value=1e+02 Score=22.32 Aligned_cols=39 Identities=26% Similarity=0.415 Sum_probs=25.2
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+.+++.++|+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 43 AYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp HHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC
Confidence 33455677899999998654 344444432 5787777654
No 351
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=30.59 E-value=30 Score=32.19 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=25.1
Q ss_pred HHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEE
Q 036871 110 PLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~ 146 (383)
++++.+++.++|++|.+.. ...+++++|||++.+
T Consensus 363 el~~~i~~~~pDl~ig~~~---~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGTQM---ERHVGKRLNIPCGVI 396 (511)
T ss_dssp HHHHHHHHHCCSEEEECHH---HHHHHHHHTCCEEEC
T ss_pred HHHHHHHhcCCCEEEeccc---hHHHHHhcCCCeEec
Confidence 4455556668888887643 677889999998874
No 352
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=30.54 E-value=1.9e+02 Score=26.18 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHh-CCCeEEEEeCCCCCc
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFAS-RGVKASVITTPANGP 48 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~-rGH~Vt~~~~~~~~~ 48 (383)
.--+++.--|+.|=..-.+.++..++. .|..|.+++.+....
T Consensus 203 G~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 203 SDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp TCEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 345677777888999999999999886 689999999876543
No 353
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=30.46 E-value=1e+02 Score=21.35 Aligned_cols=40 Identities=13% Similarity=0.148 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
...+.+++.++|+||.|.... .|..+.+.+ .+|.+.++..
T Consensus 40 ~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 40 DALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 334455667899999998655 355555543 3566666543
No 354
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=30.40 E-value=34 Score=28.53 Aligned_cols=38 Identities=13% Similarity=0.070 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCcccHH--HHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 6 PQLHVFFFPFMAHGHMI--PIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~--p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
.|.|||++ .||-. -...|.+.|.+.|++|+++......
T Consensus 3 ~m~~vLiV----~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~ 42 (259)
T 3rht_A 3 AMTRVLYC----GDTSLETAAGYLAGLMTSWQWEFDYIPSHVGL 42 (259)
T ss_dssp ---CEEEE----ESSCTTTTHHHHHHHHHHTTCCCEEECTTSCB
T ss_pred CCceEEEE----CCCCchhHHHHHHHHHHhCCceEEEecccccc
Confidence 46799999 36633 3567888999999999999987653
No 355
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=30.39 E-value=63 Score=22.26 Aligned_cols=36 Identities=25% Similarity=0.481 Sum_probs=22.4
Q ss_pred HHhhcCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEec
Q 036871 113 QLLRDHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHG 148 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~ 148 (383)
+.+++.+||+||.|.... .|..+.+.+ .+|.+.++.
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 39 SIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp HHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 445556899999998654 355555433 467666543
No 356
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=30.37 E-value=43 Score=28.71 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=20.4
Q ss_pred CCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 15 FMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 15 ~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|+.|-+- ..|+++|.++||+|+.+.-
T Consensus 11 TGatGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 11 TGASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp TTTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred ECCchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 45556665 5688999999999987653
No 357
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.36 E-value=63 Score=26.54 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=24.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
-|+++++-++.| + =.+++++|+++|++|.++...
T Consensus 8 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 8 NRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 356667665543 3 368999999999999887543
No 358
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.28 E-value=85 Score=25.79 Aligned_cols=32 Identities=19% Similarity=0.039 Sum_probs=24.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++.| + =..+|++|+++|++|.++.-
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 67777766644 3 37899999999999988753
No 359
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=30.24 E-value=1e+02 Score=21.44 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=24.2
Q ss_pred HHHHhhcC-CCCEEEecCCCc---hHHHHHHHh-----CCCcEEEecc
Q 036871 111 LEQLLRDH-KPDCLVADIFFP---WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~-~~D~vi~d~~~~---~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+.+++. ++|+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 41 a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 41 AIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 33455565 899999997543 244444433 5787776544
No 360
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=30.20 E-value=39 Score=29.71 Aligned_cols=39 Identities=10% Similarity=0.078 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+..++++.++..|.-.-+..+++.|+++|+.|..+-...
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g 135 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRD 135 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCS
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCC
Confidence 557788888877777778999999999999988776543
No 361
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=30.19 E-value=45 Score=26.81 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=26.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..+++-++..|+..-+..++..|.++|++|..+--
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 44555566667777788999999999999876654
No 362
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=30.18 E-value=1e+02 Score=23.13 Aligned_cols=38 Identities=11% Similarity=0.174 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.+||+++..+.... .-+....+.|.+.|++|++++...
T Consensus 2 ~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 45899988886443 446677788889999999998753
No 363
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=30.15 E-value=39 Score=27.50 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
...++++.++..|+..-+..+++.|+++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 4467777777777778889999999999998876543
No 364
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=30.14 E-value=29 Score=32.36 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=26.6
Q ss_pred HHHHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEE
Q 036871 109 EPLEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~ 146 (383)
.++++.+++.++|++|.+. ....+|+++|||++.+
T Consensus 339 ~el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 339 LEVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 3455566667899999875 3778889999998863
No 365
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=30.08 E-value=44 Score=26.95 Aligned_cols=36 Identities=11% Similarity=0.006 Sum_probs=26.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..+++-++..|+..-+..+++.|.++|++|..+--.
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCC
Confidence 455555566666667889999999999998776543
No 366
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=29.93 E-value=76 Score=25.89 Aligned_cols=28 Identities=7% Similarity=0.134 Sum_probs=20.3
Q ss_pred CCCEEEecC-C-CchHHHHHHHhCCCcEEE
Q 036871 119 KPDCLVADI-F-FPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 119 ~~D~vi~d~-~-~~~~~~ia~~l~iP~v~~ 146 (383)
++|+|+.=. - ...+..+|+.+++|++..
T Consensus 88 ~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~v 117 (234)
T 3m3h_A 88 TVEVIAGTATAGIAHAAWVSDRMDLPMCYV 117 (234)
T ss_dssp TCCEEEEC---CHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 789988433 2 236888999999998754
No 367
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=29.93 E-value=52 Score=31.13 Aligned_cols=45 Identities=18% Similarity=0.101 Sum_probs=34.9
Q ss_pred CCCCCCCcEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 1 MGSKVPQLHVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 1 m~~~~~~~~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|.+..++.+|++++. |+.|-..-...||..|+++|++|.++..+.
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 433334556666654 477999999999999999999999999876
No 368
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=29.87 E-value=70 Score=26.32 Aligned_cols=41 Identities=7% Similarity=-0.050 Sum_probs=28.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccch
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVS 51 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~ 51 (383)
|||+.-=-+. +-.-+..|+++|.+.| +|+++++...+..+-
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g 42 (244)
T 2e6c_A 2 RILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAG 42 (244)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc
Confidence 5555444333 3344889999999988 899999988765443
No 369
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=29.85 E-value=48 Score=24.43 Aligned_cols=35 Identities=9% Similarity=0.137 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..+++++..++ =+-|++.+++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 45788877665 4889999999999999999998 53
No 370
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=29.85 E-value=79 Score=22.40 Aligned_cols=39 Identities=10% Similarity=-0.061 Sum_probs=26.3
Q ss_pred HHHHHHhhc-CCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEe
Q 036871 109 EPLEQLLRD-HKPDCLVADIFFP--WATDAAAKF-----GIPRLVFH 147 (383)
Q Consensus 109 ~~l~~~l~~-~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~ 147 (383)
.+..+.+++ ..+|+||.|.... .+..+.+.+ ++|.|.++
T Consensus 49 ~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 49 SAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 445556677 7899999998655 356666654 46666654
No 371
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=29.79 E-value=33 Score=30.95 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=24.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.+|+|+=.+-.| +.+|..|+++|++|+++-...
T Consensus 23 ~~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHH-----HHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCCC
Confidence 478777555333 578889999999999997543
No 372
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=29.78 E-value=49 Score=27.63 Aligned_cols=31 Identities=10% Similarity=-0.021 Sum_probs=23.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
||+|+=.+.-| ..+|..|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 67777555444 36789999999999998654
No 373
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=29.76 E-value=87 Score=21.00 Aligned_cols=39 Identities=15% Similarity=0.027 Sum_probs=24.1
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHH-------hCCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAK-------FGIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~-------l~iP~v~~~~~ 149 (383)
..+.+++.++|+||.|.... .+..+.+. .++|.|.++..
T Consensus 37 ~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 37 ALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 33445566899999997544 34444433 35788776654
No 374
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=29.69 E-value=66 Score=27.47 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-C-CeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR-G-VKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r-G-H~Vt~~~~~~ 45 (383)
++++|+++..+.. .++++.|.++ | ++|.++....
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 4569999866654 4788999886 7 8888776543
No 375
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=29.67 E-value=43 Score=27.40 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=27.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..++++.++..++..-+..+++.|+++|++|..+--
T Consensus 42 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 42 KALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred CeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCC
Confidence 456666667667777788999999999999876654
No 376
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=29.63 E-value=77 Score=27.09 Aligned_cols=32 Identities=13% Similarity=0.193 Sum_probs=23.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++++++..+ |-+- ..++++|+++|++|.++.-
T Consensus 9 k~vlVTGas-~gIG--~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGA-NGVG--IGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTT-STHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEcCCc-hHHH--HHHHHHHHHCCCEEEEEEC
Confidence 566666555 4443 5789999999999887764
No 377
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=29.61 E-value=63 Score=27.91 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|.|++++..|..|.-.-...+.+.|.++|+++.+..+.
T Consensus 29 ~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~ 66 (332)
T 2bon_A 29 FPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW 66 (332)
T ss_dssp -CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec
Confidence 55788888886665466678899999999999887664
No 378
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=29.58 E-value=86 Score=25.47 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
-|+++++-++. -+ =.++|++|+++|++|.++.-
T Consensus 9 gk~~lVTGas~-gI--G~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTGASR-GI--GKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 36777776653 33 36789999999999987754
No 379
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.57 E-value=69 Score=23.27 Aligned_cols=42 Identities=21% Similarity=0.279 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 108 QEPLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 108 ~~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+..+.+++.+||+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 50 ~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 50 GAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 34455566777899999998654 355555433 4676666544
No 380
>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}
Probab=29.51 E-value=55 Score=27.42 Aligned_cols=27 Identities=26% Similarity=0.284 Sum_probs=23.6
Q ss_pred cEEEEEeCCcccCCHhhHHHHHHHHHh
Q 036871 287 SVVYICFGSIANFTSAQLMEIATGLEA 313 (383)
Q Consensus 287 ~vV~vs~GS~~~~~~~~~~~~~~a~~~ 313 (383)
..+|+|+||..+.+.+.+...++++++
T Consensus 120 ~~~~i~lGsN~gd~~~~l~~A~~~L~~ 146 (270)
T 2cg8_A 120 QRAFIALGSNMGDKQANLKQAIDKLRA 146 (270)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCCCCHHHHHHHHHHHHhc
Confidence 469999999998788888888888887
No 381
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=29.50 E-value=43 Score=27.50 Aligned_cols=38 Identities=26% Similarity=0.342 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCcccHH--HHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMI--PIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~--p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..-++++.++..+|-. -+..+|+.|+++|+.|..+-..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 3467888888777742 4788999999999998776543
No 382
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=29.49 E-value=77 Score=24.57 Aligned_cols=36 Identities=8% Similarity=-0.048 Sum_probs=24.4
Q ss_pred cEEEEEcCC-----CcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFM-----AHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~-----~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..++++.++ +...-..+..+++.|+++|+.|..+-.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEec
Confidence 345555554 333445578999999999999876653
No 383
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.45 E-value=1.2e+02 Score=22.28 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=24.6
Q ss_pred cEEE-EEcCCCcccHHH--HHHHHHHHHhCCCeE-EEEeC
Q 036871 8 LHVF-FFPFMAHGHMIP--IVDMAKLFASRGVKA-SVITT 43 (383)
Q Consensus 8 ~~il-~~~~~~~gH~~p--~~~la~~L~~rGH~V-t~~~~ 43 (383)
+|++ +++.+-+|+-.. -+.+|+++.+.||+| .++-.
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 3555 455555665444 567889999999999 76655
No 384
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.44 E-value=1.2e+02 Score=21.08 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=22.2
Q ss_pred cCCCCEEEecCCCc--hHHHHHHHh-------CCCcEEEecc
Q 036871 117 DHKPDCLVADIFFP--WATDAAAKF-------GIPRLVFHGT 149 (383)
Q Consensus 117 ~~~~D~vi~d~~~~--~~~~ia~~l-------~iP~v~~~~~ 149 (383)
..++|+||.|.... .|..+.+.+ ++|.+.++..
T Consensus 49 ~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 49 NADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp CTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 35799999998765 356665543 4677776654
No 385
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=29.39 E-value=72 Score=28.98 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+..||+|+=.+..| +.+|+.|+++||+|+..-..
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 45699998887654 24699999999999987653
No 386
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=29.39 E-value=32 Score=31.87 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=27.7
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|.+.+++.+|+|+=.+..| +.+|..|+++|++|+++-...
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSSC
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccCC
Confidence 4433445688888776555 667888999999999997654
No 387
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=29.36 E-value=58 Score=24.89 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|...+ .|..+++.+ ++|.|.++..
T Consensus 42 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (184)
T 3rqi_A 42 EALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGY 88 (184)
T ss_dssp HHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344556778899999998655 255555432 5787776654
No 388
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=29.36 E-value=72 Score=26.12 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=23.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++.| + =..++++|+++|++|.++.-
T Consensus 9 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGTHG-M--GLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56667666543 3 36899999999999988764
No 389
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=29.31 E-value=39 Score=29.73 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++++|.|+=.+.-| ..+|+.|+++||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45789998655433 4678999999999998754
No 390
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=29.22 E-value=94 Score=22.08 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=22.1
Q ss_pred cCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 117 DHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 117 ~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+..+|+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 57899999998654 355555433 5787776554
No 391
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=29.21 E-value=52 Score=26.18 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~ 45 (383)
.|.||+++-.+....+- +...++.|.++ |++|++++...
T Consensus 2 ~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~ 41 (206)
T 3f5d_A 2 SLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDP 41 (206)
T ss_dssp -CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSS
T ss_pred CccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCC
Confidence 36789999888776654 45677888888 99999998764
No 392
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=29.19 E-value=1.1e+02 Score=21.65 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=18.1
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHH
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAK 138 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~ 138 (383)
.+.+++.+||+||.|.... .|..+.+.
T Consensus 47 l~~l~~~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 47 LQAYQNRQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp HHHHHHSCCSEEEECTTCCSSCHHHHHHH
T ss_pred HHHHhcCCCCEEEEeCCCCCCcHHHHHHH
Confidence 3445567899999998654 35555544
No 393
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=29.11 E-value=85 Score=24.63 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccc----HHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGH----MIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH----~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+++|.++.... +. ..--..|++.|+++|+.|++-..
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 46888887654 33 34567888999999998665543
No 394
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=29.11 E-value=78 Score=26.05 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=24.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
-|+++++-++.| + =..++++|+++|++|+++.-
T Consensus 8 ~k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSG-I--GLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 367777766543 3 36889999999999887754
No 395
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=29.06 E-value=1.2e+02 Score=23.35 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=23.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.|+++.....-..- +..-.+.|.+.|++|++++...
T Consensus 10 ~v~il~~~gFe~~E-~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 10 ILYVMSGQNFQDEE-YFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp EEEECCSEEECHHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCCccHHH-HHHHHHHHHHCCCEEEEEECCC
Confidence 34444444433333 5667788899999999998754
No 396
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=28.80 E-value=54 Score=29.59 Aligned_cols=26 Identities=8% Similarity=0.077 Sum_probs=19.8
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGV 36 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH 36 (383)
.|+|||++-.++..| +||+.|.+.+.
T Consensus 2 ~~mkvlviG~ggre~-----ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGREH-----ALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHHHH-----HHHHHHTTCTT
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHhCCC
Confidence 367999997776544 57899998875
No 397
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=28.76 E-value=71 Score=26.17 Aligned_cols=34 Identities=6% Similarity=0.052 Sum_probs=24.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.|.++++-++ |-+- ..++++|+++|++|+++...
T Consensus 7 ~k~vlVTGas-~gIG--~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 7 VRHALITAGT-KGLG--KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cCEEEEeCCC-chhH--HHHHHHHHHCCCEEEEEcCC
Confidence 3666666554 4333 68999999999999887543
No 398
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=28.73 E-value=59 Score=27.58 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=24.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
||.|+=.+.-|. ++|+.|+++||+|++.-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 799998887664 68999999999998764
No 399
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=28.60 E-value=78 Score=29.09 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=29.0
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR-GV-KASVITTPA 45 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH-~Vt~~~~~~ 45 (383)
++++||.++=.|..| ..+|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 346799999888777 4688999999 99 999987654
No 400
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=28.59 E-value=39 Score=26.70 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=23.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
||++ +|+.|.+- ..|+++|+++||+|+.+.-.
T Consensus 2 kvlV--tGatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGI--IGATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEE--ETTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred eEEE--EcCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 4443 35556655 68899999999999988753
No 401
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=28.55 E-value=28 Score=28.86 Aligned_cols=37 Identities=14% Similarity=0.244 Sum_probs=23.3
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCe-EEEEe
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVK-ASVIT 42 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~-Vt~~~ 42 (383)
|....++++|+++=.+..| ..+++.|.++||+ |+++.
T Consensus 4 m~~~~~~m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLA-----TNLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp ---CGGGCCEEEECCSHHH-----HHHHHHHHHHTCCEEEEEC
T ss_pred hhcCCCCCeEEEEcCCHHH-----HHHHHHHHHCCCeEEEEEe
Confidence 3443445789988655444 3568888889999 55554
No 402
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=28.46 E-value=57 Score=23.28 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=22.6
Q ss_pred HHHHHhhcCCCCEEEecCCCch--HHHHHHH-------hCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFPW--ATDAAAK-------FGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~~--~~~ia~~-------l~iP~v~~~~~ 149 (383)
+..+.+++.+||+||.|..... +..+.+. -++|.|.++..
T Consensus 37 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 37 EALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 3344556678999999986542 3333332 35777766543
No 403
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=28.40 E-value=79 Score=26.17 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=29.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
+|||+.-=-+. |-.-+..|+++|.+.| +|+++++...+..+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 36766654443 4445889999999886 99999998775544
No 404
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=28.39 E-value=81 Score=27.05 Aligned_cols=46 Identities=13% Similarity=0.056 Sum_probs=28.2
Q ss_pred hhHhhccCCCCCCcEEEEEeCCcc---cCCHhhHHHHHHHHHhCCCcEEEEEe
Q 036871 274 QECLRWLNSKQPNSVVYICFGSIA---NFTSAQLMEIATGLEASRRNFIWVVR 323 (383)
Q Consensus 274 ~~~~~~l~~~~~~~vV~vs~GS~~---~~~~~~~~~~~~a~~~~~~~viw~~~ 323 (383)
+++...++ .+-+++ -+|+.. ..+.+.+..+.+.+++.+..|++-.+
T Consensus 131 ~el~~~~~-~g~~Gv---~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 131 KEASRAVA-AGHLGI---QIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp HHHHHHHH-HTCCCE---EEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHH-cCCeEE---EECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCC
Confidence 55666652 222344 344433 34557788899999998887766544
No 405
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=28.37 E-value=74 Score=24.12 Aligned_cols=45 Identities=16% Similarity=0.283 Sum_probs=31.1
Q ss_pred HhHHHHHHHhhcCCCCEEEecCCCch---------------HHHHHHHhCCCcEEEecch
Q 036871 106 KLQEPLEQLLRDHKPDCLVADIFFPW---------------ATDAAAKFGIPRLVFHGTS 150 (383)
Q Consensus 106 ~~~~~l~~~l~~~~~D~vi~d~~~~~---------------~~~ia~~l~iP~v~~~~~~ 150 (383)
.+...+.+++++.+||.+..+..++. ...++...++|+.-+.+..
T Consensus 46 ~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~ 105 (158)
T 1hjr_A 46 LIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQ 105 (158)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 35667788888889999887765431 1334566789988876643
No 406
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=28.33 E-value=77 Score=26.13 Aligned_cols=40 Identities=10% Similarity=0.079 Sum_probs=28.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
|||+.-=-+. |-.-+..|+++|.+.| +|+++++...+..+
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 41 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT 41 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 5555443333 3344889999999988 89999998776544
No 407
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=28.32 E-value=90 Score=26.16 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=22.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.++++.++ |-+ =..++++|+++||+|+++.-
T Consensus 19 k~vlVTGas-ggI--G~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 19 QVAIVTGGA-TGI--GKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 445555443 433 36789999999999988764
No 408
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=28.31 E-value=46 Score=27.66 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=32.5
Q ss_pred CCcEEEEEcCC---CcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 6 PQLHVFFFPFM---AHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 6 ~~~~il~~~~~---~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.++|..|++.+ +-|-=.-...++..|..||++||.+--+++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 45588888887 345567789999999999999998766554
No 409
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=28.27 E-value=82 Score=22.41 Aligned_cols=37 Identities=16% Similarity=0.305 Sum_probs=23.2
Q ss_pred HHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 113 QLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
+.+++.++|+||.|.... .|..+.+.+ .+|.+.++..
T Consensus 42 ~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 42 QFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 344556899999998654 355555443 4666666543
No 410
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=28.24 E-value=64 Score=26.37 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=23.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
++++++-++ |-+- .++|++|+++|++|.++.-
T Consensus 8 k~~lVTGas-~GIG--~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGAS-QGIG--AVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTT-SHHH--HHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEEC
Confidence 566666555 3333 6899999999999987754
No 411
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=28.22 E-value=49 Score=25.40 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=29.9
Q ss_pred CcEEEEEcCC--Cccc-HHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPFM--AHGH-MIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~~--~~gH-~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
..+|+|+|.- +-.. ..+...|++.|.++|.+|.|...+-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3477777754 1222 5689999999999999999999865
No 412
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=28.18 E-value=68 Score=26.37 Aligned_cols=41 Identities=12% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCcEEEEEcCC--CcccHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 6 PQLHVFFFPFM--AHGHMIPIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 6 ~~~~il~~~~~--~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
++.+++.+..+ +.|=..-...||..|+ +|++|.++-.+...
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~~ 67 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQA 67 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTTC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCCC
Confidence 34566655544 6688888999999999 99999998876543
No 413
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=28.01 E-value=39 Score=28.96 Aligned_cols=27 Identities=15% Similarity=0.226 Sum_probs=20.0
Q ss_pred CCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 15 FMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 15 ~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|+.|-+- ..|+++|.++||+|+.+.-
T Consensus 15 TGatGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 15 VGGTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp ECTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred ECCchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 35556554 4688999999999987653
No 414
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=28.00 E-value=51 Score=29.94 Aligned_cols=33 Identities=18% Similarity=-0.009 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
..|.+|.++=.|.-| +.+|..|+++||+|+.+-
T Consensus 19 ~~m~~IaViGlGYVG-----Lp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 19 SHMASLSVLGLGYVG-----VVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEEccCHHH-----HHHHHHHHhCCCcEEEEE
Confidence 357789888555444 788999999999998774
No 415
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=27.97 E-value=34 Score=27.41 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=24.9
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 10 VFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 10 il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.+++-++..++..-+..++..|.++|++|..+--.
T Consensus 6 ~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 6 HFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred cEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 34444555566666889999999999998766543
No 416
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=27.94 E-value=92 Score=22.53 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=22.5
Q ss_pred CcEEEEEcCCCcccHH--------HHHHHHHHHHhCCCeEE
Q 036871 7 QLHVFFFPFMAHGHMI--------PIVDMAKLFASRGVKAS 39 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~--------p~~~la~~L~~rGH~Vt 39 (383)
+++.++++.|..|... -+.+.|..|.++||.+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 3466788888777732 24556777889999654
No 417
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=27.93 E-value=64 Score=28.04 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=24.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++|++. ++.|.+- ..|+++|.++||+|+.++-..
T Consensus 6 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 39 (352)
T 1xgk_A 6 KTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHSL 39 (352)
T ss_dssp CCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESCS
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECCC
Confidence 455543 5666654 567899999999999887543
No 418
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.92 E-value=67 Score=26.95 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+.|+++++.++.| + =..+|++|+++|++|.++.-
T Consensus 11 ~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 3467777766543 3 35889999999999888764
No 419
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=27.85 E-value=76 Score=24.65 Aligned_cols=38 Identities=24% Similarity=0.445 Sum_probs=25.5
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
.+.+++.+||+||.|...+ .|..+.+.+ ++|.|.++..
T Consensus 41 l~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 41 LEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp HHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3455677899999998655 355555543 5787776543
No 420
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=27.84 E-value=83 Score=24.29 Aligned_cols=40 Identities=13% Similarity=0.010 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCcccHHHH-HHHHHHHHh-CCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPI-VDMAKLFAS-RGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~-~~la~~L~~-rGH~Vt~~~~~~ 45 (383)
.|+||+++-....|+..-+ ..+++.|.+ .|++|.++....
T Consensus 3 ~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 3 AMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 3668887766667776544 456777777 899999887654
No 421
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=27.75 E-value=1.1e+02 Score=27.69 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=34.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCCCCCc
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTPANGP 48 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~~~~~ 48 (383)
..|+++..++.|-..-...||..|+++ |+.|.++..+.+..
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 356666666889999999999999999 99999999987654
No 422
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=27.70 E-value=58 Score=27.27 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCC-CeEEEEeCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRG-VKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rG-H~Vt~~~~~~ 45 (383)
++|++ +|+.|.+- ..++++|.++| |+|+.++-..
T Consensus 6 ~~ilV--tGatG~iG--~~l~~~L~~~g~~~V~~~~R~~ 40 (299)
T 2wm3_A 6 KLVVV--FGGTGAQG--GSVARTLLEDGTFKVRVVTRNP 40 (299)
T ss_dssp CEEEE--ETTTSHHH--HHHHHHHHHHCSSEEEEEESCT
T ss_pred CEEEE--ECCCchHH--HHHHHHHHhcCCceEEEEEcCC
Confidence 35544 35566664 56889999999 9999987543
No 423
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=27.68 E-value=99 Score=24.38 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCC---c----ccHHHHHHHHHHHHhCCCeEEE
Q 036871 6 PQLHVFFFPFMA---H----GHMIPIVDMAKLFASRGVKASV 40 (383)
Q Consensus 6 ~~~~il~~~~~~---~----gH~~p~~~la~~L~~rGH~Vt~ 40 (383)
.|.+|.++..-. . -...-...|++.|+++|+.|+.
T Consensus 22 ~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 22 HMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp -CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 455788877542 2 4567889999999999998776
No 424
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=27.64 E-value=36 Score=29.31 Aligned_cols=34 Identities=6% Similarity=0.036 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+++|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 19 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 19 SHMILVT--GSAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp --CEEEE--TTTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 4455543 5567665 56889999999999988654
No 425
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=27.45 E-value=1.1e+02 Score=23.98 Aligned_cols=40 Identities=10% Similarity=-0.100 Sum_probs=33.6
Q ss_pred CCCcEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 5 VPQLHVFFFPFM-AHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 5 ~~~~~il~~~~~-~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..+.+|.++..+ ..|=..-++.++..+..+|.+|.++.+.
T Consensus 5 ~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 5 KDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp TTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 344577777777 8899999999999999999999999854
No 426
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=27.44 E-value=43 Score=28.62 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=24.5
Q ss_pred CCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCC--eEEEEeCC
Q 036871 3 SKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGV--KASVITTP 44 (383)
Q Consensus 3 ~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH--~Vt~~~~~ 44 (383)
++++++||+++=. |.+--. +|..|+++|| +|+++...
T Consensus 3 ~~~~~mkI~IiGa---G~vG~~--~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 3 TTVKPTKLAVIGA---GAVGST--LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ----CCEEEEECC---SHHHHH--HHHHHHHTTCCSEEEEECSS
T ss_pred cCCCCCEEEEECC---CHHHHH--HHHHHHhCCCCCEEEEEeCC
Confidence 3455679998854 444433 6778999999 99988754
No 427
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=27.43 E-value=53 Score=26.96 Aligned_cols=32 Identities=9% Similarity=-0.037 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|.++++-.+ |-+ =..++++|+++|++|+++.-
T Consensus 10 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 10 CTALVTGGS-RGI--GYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 555565544 433 35789999999999988764
No 428
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=27.21 E-value=39 Score=28.93 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGV-KASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH-~Vt~~~~ 43 (383)
++++|.|+=.+.-| ..+|+.|+++|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 46789998665544 478999999999 9988765
No 429
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=27.16 E-value=93 Score=21.71 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCcccHHHHH-HHHHHHHhCCCe-EEEEeC
Q 036871 6 PQLHVFFFPFMAHGHMIPIV-DMAKLFASRGVK-ASVITT 43 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~-~la~~L~~rGH~-Vt~~~~ 43 (383)
++.||++++..+.|.-.-+. .+-+.+.++|.+ +.+-+.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 46789999999888887777 888888899988 655443
No 430
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=27.10 E-value=47 Score=27.71 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=37.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHH--------HHhC-CCeEEEEeCCCCCccc
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKL--------FASR-GVKASVITTPANGPYV 50 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~--------L~~r-GH~Vt~~~~~~~~~~~ 50 (383)
.+.+|++.+.+.-.|-....-++.. |.++ |++|+.+....-.+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 3668999999999999999999987 9999 9999998875443333
No 431
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.09 E-value=89 Score=25.82 Aligned_cols=33 Identities=15% Similarity=0.053 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
-|+++++-++. -+ =..+|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASR-GI--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 36777766653 33 36789999999999988664
No 432
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=26.96 E-value=94 Score=23.81 Aligned_cols=36 Identities=11% Similarity=-0.022 Sum_probs=24.9
Q ss_pred cEEEEEcCC-----CcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFM-----AHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~-----~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..++++.++ ....-..+..+++.|+++|+.|..+-.
T Consensus 31 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 71 (208)
T 3trd_A 31 SVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNF 71 (208)
T ss_dssp SEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEec
Confidence 345555555 444455568999999999999876543
No 433
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=26.88 E-value=1.3e+02 Score=23.98 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=28.1
Q ss_pred cEEEEEcCC---------CcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 8 LHVFFFPFM---------AHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 8 ~~il~~~~~---------~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
.||+|+... ..-...-+....+.|.++|++|++++...
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 588888772 22334567778888999999999999754
No 434
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.84 E-value=91 Score=25.61 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=23.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++.| + =..++++|+++|++|+++.-
T Consensus 12 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 12 KVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp CEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 56666666543 3 36889999999999887754
No 435
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.81 E-value=43 Score=26.53 Aligned_cols=27 Identities=15% Similarity=0.114 Sum_probs=21.5
Q ss_pred CCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 15 FMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 15 ~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+|+.|.+- ..|+++|.++||+|+.+.-
T Consensus 6 tGatG~iG--~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 6 LGATGRAG--SAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp ETTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EcCCCHHH--HHHHHHHHHCCCEEEEEEe
Confidence 45556665 6889999999999998874
No 436
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=26.78 E-value=51 Score=27.67 Aligned_cols=31 Identities=26% Similarity=0.254 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|+||+|+=.+..|. .+++.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 46899886665554 46888999999998664
No 437
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.76 E-value=98 Score=25.61 Aligned_cols=32 Identities=19% Similarity=0.041 Sum_probs=23.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++ |-+ =..+|++|+++|++|.++.-
T Consensus 29 k~~lVTGas-~GI--G~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 29 QVAIVTGAS-RGI--GRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 667776655 333 36889999999999987764
No 438
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=26.70 E-value=71 Score=26.03 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|.|.++++.++ |-+ =..++++|+++|++|.++.-.
T Consensus 21 m~k~vlITGas-~gI--G~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 21 MSKNILVLGGS-GAL--GAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp -CCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44666666555 433 368999999999998887643
No 439
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=26.65 E-value=68 Score=25.42 Aligned_cols=37 Identities=0% Similarity=-0.094 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCc---ccHHH-HHHHHHHHHhC--CCeEEEEeC
Q 036871 7 QLHVFFFPFMAH---GHMIP-IVDMAKLFASR--GVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~---gH~~p-~~~la~~L~~r--GH~Vt~~~~ 43 (383)
|+||+++..... |+..- ...+++.|.++ ||+|+++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 356776554433 33333 34566677776 999988764
No 440
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=26.65 E-value=1.9e+02 Score=24.21 Aligned_cols=33 Identities=24% Similarity=0.147 Sum_probs=24.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+++++-++.| + =.++|++|+++|++|.++.-.
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFITGAARG-Q--GRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEecc
Confidence 67777766543 3 368899999999999887643
No 441
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=26.64 E-value=2.7e+02 Score=22.98 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=23.8
Q ss_pred CCCCEEE-ecCCCc-hHHHHHHHhCCCcEEEecc
Q 036871 118 HKPDCLV-ADIFFP-WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 118 ~~~D~vi-~d~~~~-~~~~ia~~l~iP~v~~~~~ 149 (383)
..||+|+ .|...- -+..=|.++|||.|.++-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4789876 676444 5677788999999997654
No 442
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=26.62 E-value=54 Score=28.45 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=22.2
Q ss_pred hhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEe
Q 036871 115 LRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFH 147 (383)
Q Consensus 115 l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~ 147 (383)
|-+.+||+||...... -...+.+.+|||++.+.
T Consensus 92 Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 92 LITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 3456899999765432 23345677899998864
No 443
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=26.60 E-value=79 Score=25.89 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++ |-+- ..++++|+++|++|+++.-
T Consensus 9 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSA-RGIG--RAFAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCS-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEeC
Confidence 455565544 4333 5789999999999987754
No 444
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=26.57 E-value=1e+02 Score=24.16 Aligned_cols=39 Identities=18% Similarity=0.259 Sum_probs=25.8
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecch
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGTS 150 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~~ 150 (383)
.+.+++.+||+||.|.... .|..+.+.+ ++|.+.++...
T Consensus 39 ~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 39 MYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3455667899999998654 355555433 67888776543
No 445
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=26.50 E-value=1e+02 Score=24.17 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcc----cHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHG----HMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~g----H~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.+|.++..-..| +..--..|++.|+++|+.|+.-..
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg 41 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGS 41 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 357777666432 455678899999999998765543
No 446
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=26.49 E-value=37 Score=27.13 Aligned_cols=31 Identities=16% Similarity=0.106 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
||+++=. |.+ =..+|+.|.++||+|+++...
T Consensus 2 ~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 5666543 433 357899999999999998753
No 447
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=26.31 E-value=1.1e+02 Score=24.87 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=27.3
Q ss_pred HHHHHHhhcCCCCEEEecCCCc--hHHHHHHHh----CCCcEEEecc
Q 036871 109 EPLEQLLRDHKPDCLVADIFFP--WATDAAAKF----GIPRLVFHGT 149 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l----~iP~v~~~~~ 149 (383)
.+..+.+++.+||+||.|.... .|..+.+.+ ++|.|.++..
T Consensus 71 ~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~ 117 (249)
T 3q9s_A 71 MNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTAR 117 (249)
T ss_dssp HHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECC
Confidence 3444556678899999998766 355555543 5787776554
No 448
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=26.15 E-value=94 Score=21.62 Aligned_cols=36 Identities=8% Similarity=0.169 Sum_probs=27.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+||++++..+-|+-.-...+-+.+.++|.++.+-+.
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 478888888777766677888889999998765443
No 449
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=26.14 E-value=60 Score=26.90 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
.|+++++-++.| + =.++|++|+++|++|.+...
T Consensus 27 ~k~~lVTGas~G-I--G~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASRG-I--GAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEcC
Confidence 467777766542 2 36889999999999988654
No 450
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=26.09 E-value=53 Score=28.24 Aligned_cols=34 Identities=6% Similarity=0.040 Sum_probs=21.4
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhCC--CeEEEEe
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASRG--VKASVIT 42 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~rG--H~Vt~~~ 42 (383)
+++++|++ +|+.|.+- ..|+++|.++| |+|+.+.
T Consensus 22 ~~~~~vlV--tGatG~iG--~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 22 SNAMNILV--TGGAGFIG--SNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp --CEEEEE--ETTTSHHH--HHHHHHHHHHCTTEEEEEEE
T ss_pred cCCCeEEE--ECCccHHH--HHHHHHHHhhCCCcEEEEEe
Confidence 34556554 35667665 57899999999 4555444
No 451
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=26.07 E-value=53 Score=27.83 Aligned_cols=34 Identities=9% Similarity=0.095 Sum_probs=26.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
..+++-++..+|..-+..+++.|+++|++|..+-
T Consensus 36 ~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D 69 (305)
T 1tht_A 36 NTILIASGFARRMDHFAGLAEYLSTNGFHVFRYD 69 (305)
T ss_dssp CEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEEC
T ss_pred CEEEEecCCccCchHHHHHHHHHHHCCCEEEEee
Confidence 4566667766777778899999999999986543
No 452
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=26.06 E-value=84 Score=25.81 Aligned_cols=32 Identities=31% Similarity=0.214 Sum_probs=23.2
Q ss_pred CCCCEEEecCCCc-------hHHHHHHHhCCCcEEEecc
Q 036871 118 HKPDCLVADIFFP-------WATDAAAKFGIPRLVFHGT 149 (383)
Q Consensus 118 ~~~D~vi~d~~~~-------~~~~ia~~l~iP~v~~~~~ 149 (383)
.+||++++|..-. .|..+.-.+++|.|.+.=+
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 146 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKT 146 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeecc
Confidence 5799999998643 2455666788999987533
No 453
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=26.04 E-value=2.6e+02 Score=30.38 Aligned_cols=104 Identities=11% Similarity=0.089 Sum_probs=0.0
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccchhhHhhhhhcCCCcceEeeeCCCccCCCCCCCccccccc
Q 036871 10 VFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYVSKSVERANEMGIELDVKTIKFPSVEAGLPEGCENLDAIT 89 (383)
Q Consensus 10 il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (383)
+++.--|+.|-..-.+.++...+.+|..|.|++.+...+.+... ..++....+-.....
T Consensus 386 ilI~G~pGsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~~a~-------~lGvd~~~L~i~~~~-------------- 444 (1706)
T 3cmw_A 386 VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAR-------KLGVDIDNLLCSQPD-------------- 444 (1706)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHH-------HTTCCGGGCEEECCS--------------
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHH-------HcCCCHHHeEEcCCC--------------
Q ss_pred hhhhHHHHHHHHHHHHHhHHHHHHHhhcCCCCEEEecCCCchH----------------------------HHHHHHhCC
Q 036871 90 NEVNKELIVKFVGATTKLQEPLEQLLRDHKPDCLVADIFFPWA----------------------------TDAAAKFGI 141 (383)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vi~d~~~~~~----------------------------~~ia~~l~i 141 (383)
.. +.+...++..+++.++|+||.|+..... ..+++.+++
T Consensus 445 -----~~--------e~~l~~l~~lv~~~~~~lVVIDSL~al~~~~e~e~~~g~~~~~~q~r~~s~~Lr~L~~~ak~~~v 511 (1706)
T 3cmw_A 445 -----TG--------EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNT 511 (1706)
T ss_dssp -----SH--------HHHHHHHHHHHHHTCCSEEEESCSTTCCCHHHHHSCTTCCCTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred -----CH--------HHHHHHHHHHHHhcCCCEEEECCHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCC
Q ss_pred CcEEEe
Q 036871 142 PRLVFH 147 (383)
Q Consensus 142 P~v~~~ 147 (383)
|++.+.
T Consensus 512 ~VI~in 517 (1706)
T 3cmw_A 512 LLIFIN 517 (1706)
T ss_dssp EEEEEE
T ss_pred EEEEEe
No 454
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=26.01 E-value=74 Score=25.84 Aligned_cols=32 Identities=13% Similarity=-0.021 Sum_probs=22.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++ |-+ =..++++|+++|++|+++.-
T Consensus 3 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGG-HGI--GKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 456666555 333 36889999999999988753
No 455
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=25.91 E-value=55 Score=28.68 Aligned_cols=34 Identities=9% Similarity=-0.079 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+..+|+|+=.+..| +.+|..|+++|++|+++-..
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 34588888766544 67788999999999998753
No 456
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=25.86 E-value=47 Score=29.84 Aligned_cols=47 Identities=9% Similarity=0.112 Sum_probs=36.1
Q ss_pred hhHhhccCCCCCCcEEEEEeCCcccCCHhhHHHHHHHHHhCCCcEEE
Q 036871 274 QECLRWLNSKQPNSVVYICFGSIANFTSAQLMEIATGLEASRRNFIW 320 (383)
Q Consensus 274 ~~~~~~l~~~~~~~vV~vs~GS~~~~~~~~~~~~~~a~~~~~~~viw 320 (383)
..+.+|-...+.+.-|.|-.+|+....+...+.+.+++.+.+..++.
T Consensus 253 ~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 253 NHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 44566765443455677889999998889999999999999887654
No 457
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=25.86 E-value=83 Score=27.15 Aligned_cols=40 Identities=5% Similarity=-0.046 Sum_probs=28.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANG 47 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~ 47 (383)
++|++.+.|.-|+-+....++..|..-|.+|++++++.+.
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYE 208 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccC
Confidence 5677777777777666677777777778888887776653
No 458
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=25.85 E-value=80 Score=26.51 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=28.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
..++++-++..|+..-+..+++.|+++|+.|..+-
T Consensus 96 ~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d 130 (306)
T 3vis_A 96 YGAIAISPGYTGTQSSIAWLGERIASHGFVVIAID 130 (306)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEEC
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEec
Confidence 45677778888888889999999999999877654
No 459
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=25.83 E-value=83 Score=22.33 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=24.7
Q ss_pred HHHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 111 LEQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+.+++.++|+||.|.... .|..+.+.+ ++|.|.++..
T Consensus 36 a~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 36 AIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp HHHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 33455667899999998654 355555433 4676666544
No 460
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=25.76 E-value=45 Score=27.08 Aligned_cols=37 Identities=16% Similarity=0.044 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
...++++.++..|+..-+..+++.|+++|+.|..+..
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 89 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDT 89 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECC
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCC
Confidence 3456667777777777788899999999998776554
No 461
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=25.61 E-value=66 Score=29.39 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeC
Q 036871 5 VPQLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITT 43 (383)
Q Consensus 5 ~~~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~ 43 (383)
++++||.++=.|.-| ..+|..|+++ ||+|+++..
T Consensus 3 ~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 3 FEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 345799999666555 4567888888 899988754
No 462
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=25.59 E-value=88 Score=26.34 Aligned_cols=40 Identities=10% Similarity=0.029 Sum_probs=28.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCCCCccc
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPANGPYV 50 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~~~~~ 50 (383)
|||+.-=-+. +-.-+..|+++|.+.| +|+++++...+..+
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSAT 41 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTS
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC
Confidence 5555443333 3344889999999998 99999998775543
No 463
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=25.56 E-value=2.7e+02 Score=23.67 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=31.7
Q ss_pred HHHHHHhhcCCCCEEEecCCCc--hHHHHHHHhCCCcEEEe
Q 036871 109 EPLEQLLRDHKPDCLVADIFFP--WATDAAAKFGIPRLVFH 147 (383)
Q Consensus 109 ~~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~l~iP~v~~~ 147 (383)
..+.+.+++.+..+|+++..+. .+..+|+..|++.+.+.
T Consensus 229 ~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 229 AKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp HHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 4667788889999999998766 47889999999976543
No 464
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=25.56 E-value=1.5e+02 Score=24.04 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=21.2
Q ss_pred CCCEEE-ecCC-CchHHHHHHHhCCCcEEE
Q 036871 119 KPDCLV-ADIF-FPWATDAAAKFGIPRLVF 146 (383)
Q Consensus 119 ~~D~vi-~d~~-~~~~~~ia~~l~iP~v~~ 146 (383)
++|+|+ .+.- +..+..+|+.+++|++..
T Consensus 71 ~~d~Ivgv~~gG~~~a~~lA~~L~~p~~~~ 100 (236)
T 1qb7_A 71 APTHILGFDARGFLFGPMIAVELEIPFVLM 100 (236)
T ss_dssp CCSEEEEETTGGGGTHHHHHHHHTCCEEEE
T ss_pred CCCEEEEECcCcHHHHHHHHHHhCCCEEEE
Confidence 789988 4443 346889999999998653
No 465
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.53 E-value=91 Score=22.83 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=27.0
Q ss_pred HHHHHHHhhcC--CCCEEEecCCCc--hHHHHHHHh-----CCCcEEEecc
Q 036871 108 QEPLEQLLRDH--KPDCLVADIFFP--WATDAAAKF-----GIPRLVFHGT 149 (383)
Q Consensus 108 ~~~l~~~l~~~--~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~~ 149 (383)
..+..+.+++. ++|+||.|.... .+..+.+.+ ++|.|.++..
T Consensus 70 ~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 70 GEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 34455556666 899999998654 355555433 5787776654
No 466
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=25.52 E-value=58 Score=26.32 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=27.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
..+++-.+..|+..-+..+++.|+++|+.|..+--
T Consensus 41 ~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 75 (270)
T 3rm3_A 41 VGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRL 75 (270)
T ss_dssp EEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCC
Confidence 56666677777777788999999999999765543
No 467
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=25.50 E-value=1.4e+02 Score=25.14 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=24.0
Q ss_pred HHHHHhhcCCCCEEE-ecCCC-chHHHHHHHhCCCcEE
Q 036871 110 PLEQLLRDHKPDCLV-ADIFF-PWATDAAAKFGIPRLV 145 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi-~d~~~-~~~~~ia~~l~iP~v~ 145 (383)
.+.+.+++.++|+|+ .+.-. ..+..+|+.+++|++.
T Consensus 121 ~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~ 158 (291)
T 1o57_A 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVI 158 (291)
T ss_dssp HHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEE
Confidence 333344455789888 44333 3588899999999765
No 468
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=25.47 E-value=64 Score=26.60 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=23.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|+++++-++ |-+ =.++|++|+++|++|+++.-.
T Consensus 28 k~vlVTGas-~gI--G~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGAS-QRV--GLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTT-SHH--HHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 556666555 333 368899999999999887654
No 469
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.44 E-value=82 Score=25.21 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=22.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 9 HVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 9 ~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|+++++-++ |-+ =..++++|+++|++|.++.-
T Consensus 3 k~vlITGas-~gI--G~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGAS-RGI--GEAIARALARDGYALALGAR 34 (235)
T ss_dssp CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 455665554 333 36889999999999887764
No 470
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=25.44 E-value=97 Score=26.66 Aligned_cols=39 Identities=15% Similarity=0.109 Sum_probs=31.4
Q ss_pred cEEEEEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 8 LHVFFFP-FMAHGHMIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 8 ~~il~~~-~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
.+|++++ -|+-|-..-...||..|+++|++|.++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3555444 34779999999999999999999999988764
No 471
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=25.43 E-value=82 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=27.8
Q ss_pred cEEEEEcCCCcc----cHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 8 LHVFFFPFMAHG----HMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 8 ~~il~~~~~~~g----H~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
..|.++..-..| +..-...|++.|+++|+.|+.-...
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~ 78 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGP 78 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCS
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh
Confidence 578888776554 5667889999999999987765553
No 472
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.37 E-value=1.2e+02 Score=21.44 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=23.7
Q ss_pred EEcCCCcccH--HHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 12 FFPFMAHGHM--IPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 12 ~~~~~~~gH~--~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++..+-+|+- .--+.+|.++...||+|.++-..+
T Consensus 7 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 7 VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 3444445655 556778888888999998877643
No 473
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=25.32 E-value=63 Score=26.47 Aligned_cols=35 Identities=6% Similarity=0.042 Sum_probs=23.0
Q ss_pred HhhcCCCCEEEecCCCc-hHHHHHHHhCCCcEEEec
Q 036871 114 LLRDHKPDCLVADIFFP-WATDAAAKFGIPRLVFHG 148 (383)
Q Consensus 114 ~l~~~~~D~vi~d~~~~-~~~~ia~~l~iP~v~~~~ 148 (383)
.|.+.+||+||...... -....-++.+||++.+..
T Consensus 55 ~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 55 AVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 34567899999764322 234445678999987643
No 474
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=25.24 E-value=1.1e+02 Score=24.11 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=25.3
Q ss_pred CcEEEEEcCCC---cccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPFMA---HGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~~~---~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
+++|.++.... .-+..-...|++.|+++|+.|+.-..
T Consensus 22 ~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 22 QWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 46888886544 12245567899999999998765443
No 475
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=25.22 E-value=85 Score=27.59 Aligned_cols=35 Identities=14% Similarity=-0.002 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
++++|+++-.+ ..-..+++++.++||+|..+....
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 45699998543 134678999999999998887654
No 476
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=25.21 E-value=55 Score=29.71 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
...+|+++=.|..| +..|..|+++|++|+++-...
T Consensus 10 ~~~dvvVIGaG~~G-----L~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 10 TDYDVIVLGTGITE-----CILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCCC
Confidence 34578877666433 677889999999999987544
No 477
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.21 E-value=1.3e+02 Score=20.93 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=22.0
Q ss_pred CCCCEEEecCCCc--hHHHHHHH-------hCCCcEEEecch
Q 036871 118 HKPDCLVADIFFP--WATDAAAK-------FGIPRLVFHGTS 150 (383)
Q Consensus 118 ~~~D~vi~d~~~~--~~~~ia~~-------l~iP~v~~~~~~ 150 (383)
..+|+||.|.... .+..+.+. .++|.|.++...
T Consensus 54 ~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 7899999998654 35555443 357777776543
No 478
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=25.20 E-value=62 Score=27.88 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=23.4
Q ss_pred HHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEec
Q 036871 113 QLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHG 148 (383)
Q Consensus 113 ~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~ 148 (383)
+.|.+.+||+||......-...--++.|+|++.+..
T Consensus 110 E~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 344557999999865422233344567899988753
No 479
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=25.20 E-value=70 Score=26.74 Aligned_cols=32 Identities=9% Similarity=0.059 Sum_probs=23.8
Q ss_pred CcEEEEEcC-CCcccHHHHHHHHHHHHhCCCeEEEEeC
Q 036871 7 QLHVFFFPF-MAHGHMIPIVDMAKLFASRGVKASVITT 43 (383)
Q Consensus 7 ~~~il~~~~-~~~gH~~p~~~la~~L~~rGH~Vt~~~~ 43 (383)
|++|+|+=. |.-| ..+++.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 358988865 5444 4678899999999987653
No 480
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=25.19 E-value=1.6e+02 Score=23.71 Aligned_cols=38 Identities=8% Similarity=-0.047 Sum_probs=28.9
Q ss_pred CcEEEEEcC-----CCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 7 QLHVFFFPF-----MAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 7 ~~~il~~~~-----~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
|+||+|+.+ +.. -..=+......|.++|++|++++...
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 568999887 432 44556677788999999999999754
No 481
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=25.14 E-value=36 Score=32.12 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=21.3
Q ss_pred ccHHHHHH---HHHHHHhCCCeEEEEeCCC
Q 036871 19 GHMIPIVD---MAKLFASRGVKASVITTPA 45 (383)
Q Consensus 19 gH~~p~~~---la~~L~~rGH~Vt~~~~~~ 45 (383)
||+..++. +++.|..+||+|.+++.-+
T Consensus 44 GH~r~~v~~D~laR~~r~~G~~V~~~~g~d 73 (564)
T 3kfl_A 44 GHVYSTLIVDVLGRYHRVKGEEVFVMTGTD 73 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred chhHHHHHHHHHHHHHHHcCCcEEEecCcC
Confidence 88876554 7888888999999988643
No 482
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=25.14 E-value=77 Score=26.47 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=22.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 8 LHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 8 ~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
-|+++++-++. -+ =..+|++|+++|++|.++.
T Consensus 8 gk~vlVTGas~-GI--G~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 8 GKIAIVTGASS-GI--GRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp TCEEEESSTTS-HH--HHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEE
Confidence 36677776654 33 3678999999999987654
No 483
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=25.13 E-value=1.1e+02 Score=24.07 Aligned_cols=37 Identities=22% Similarity=0.412 Sum_probs=24.2
Q ss_pred HHHhhcCCCCEEEecCCCc--hHHHHHHHh-----CCCcEEEec
Q 036871 112 EQLLRDHKPDCLVADIFFP--WATDAAAKF-----GIPRLVFHG 148 (383)
Q Consensus 112 ~~~l~~~~~D~vi~d~~~~--~~~~ia~~l-----~iP~v~~~~ 148 (383)
.+.+++.+||+||.|.... .|..+.+.+ ++|.+.++.
T Consensus 44 ~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 44 LRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp HHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 3445667899999998655 355555433 577776653
No 484
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=25.03 E-value=1.4e+02 Score=21.11 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=22.9
Q ss_pred HHhhc-CCCCEEEecCCCc---hHHHHHHH----hCCCcEEEec
Q 036871 113 QLLRD-HKPDCLVADIFFP---WATDAAAK----FGIPRLVFHG 148 (383)
Q Consensus 113 ~~l~~-~~~D~vi~d~~~~---~~~~ia~~----l~iP~v~~~~ 148 (383)
+.+++ ..||+||.|.... .+..+.+. -++|.|.++.
T Consensus 43 ~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 43 EKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp HHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred HHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 34444 7899999998652 35555443 3678776654
No 485
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.98 E-value=68 Score=27.49 Aligned_cols=34 Identities=9% Similarity=0.115 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhC--CCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASR--GVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~r--GH~Vt~~~~~ 44 (383)
|++|++. |+.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 4 m~~vlVT--GatG~iG--~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 4 FKNIIVT--GGAGFIG--SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp CSEEEEE--TTTSHHH--HHHHHHHHHHCTTCEEEEEECC
T ss_pred CcEEEEe--CCccHHH--HHHHHHHHHhCCCCEEEEEeCC
Confidence 4566543 5556554 5688899998 8999988753
No 486
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=24.95 E-value=1.5e+02 Score=20.80 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=20.9
Q ss_pred CCCCEEEecCCCc--hHHHHHHHh------CCCcEEEecc
Q 036871 118 HKPDCLVADIFFP--WATDAAAKF------GIPRLVFHGT 149 (383)
Q Consensus 118 ~~~D~vi~d~~~~--~~~~ia~~l------~iP~v~~~~~ 149 (383)
.+||+||.|...+ .|..+++.+ .+|.|.++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 6799999998665 355554432 4676666544
No 487
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=24.90 E-value=72 Score=26.89 Aligned_cols=36 Identities=8% Similarity=0.005 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCcccHH-HHHHHHHHHHhCCCeEEEEe
Q 036871 7 QLHVFFFPFMAHGHMI-PIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~-p~~~la~~L~~rGH~Vt~~~ 42 (383)
|.||+++..|..++.. -...+.+.|.++|++|.+..
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~ 41 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQ 41 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 5689999998765543 36778899999999987653
No 488
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.90 E-value=75 Score=27.92 Aligned_cols=38 Identities=18% Similarity=0.088 Sum_probs=30.3
Q ss_pred CcEEE-EEc-CCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVF-FFP-FMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il-~~~-~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+.+++ +++ -|+.|=..-...||..|+++|++|.++-.+
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34544 443 457788999999999999999999998866
No 489
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.89 E-value=28 Score=31.88 Aligned_cols=33 Identities=6% Similarity=0.157 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
.+||+++=.+-.| ..||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4688888666544 46899999999999998654
No 490
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=24.87 E-value=48 Score=29.46 Aligned_cols=43 Identities=7% Similarity=0.072 Sum_probs=30.3
Q ss_pred CCCCcEEEEEcCCCcc-c---HHHHHHHHHHHHhCCCeEEEEeCCCC
Q 036871 4 KVPQLHVFFFPFMAHG-H---MIPIVDMAKLFASRGVKASVITTPAN 46 (383)
Q Consensus 4 ~~~~~~il~~~~~~~g-H---~~p~~~la~~L~~rGH~Vt~~~~~~~ 46 (383)
+|+++||+++..+..+ | +..-..++++|.+.||+|+.+-....
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~ 65 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQ 65 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCC
Confidence 3567899988877443 3 24455888999999999998876443
No 491
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.84 E-value=73 Score=29.66 Aligned_cols=36 Identities=11% Similarity=0.095 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~~ 45 (383)
+..||.|+=.+..| |..+|+.|.++|++|+..-...
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~~ 53 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDANI 53 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESCC
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCCC
Confidence 35689999998866 8899999999999999876543
No 492
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=24.76 E-value=1.1e+02 Score=25.55 Aligned_cols=32 Identities=25% Similarity=0.132 Sum_probs=22.9
Q ss_pred EEEEEcCCC-cccHHHHHHHHHHHHhCCCeEEEEe
Q 036871 9 HVFFFPFMA-HGHMIPIVDMAKLFASRGVKASVIT 42 (383)
Q Consensus 9 ~il~~~~~~-~gH~~p~~~la~~L~~rGH~Vt~~~ 42 (383)
|+++++-.+ .|-+ =.++|++|+++|++|+++.
T Consensus 9 k~~lVTGas~~~GI--G~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 9 KRAFIAGIADDNGY--GWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CEEEEECCSSSSSH--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCCh--HHHHHHHHHHCCCeEEEee
Confidence 566666655 1333 3688999999999998864
No 493
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=24.72 E-value=81 Score=27.57 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=31.7
Q ss_pred CCcEEEEEcCC-CcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 6 PQLHVFFFPFM-AHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 6 ~~~~il~~~~~-~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+..+|++.-+. +-|-......|.++|.+||+++.++.+.
T Consensus 151 ~~k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~~~tg 190 (349)
T 2obn_A 151 PCRRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKFLATG 190 (349)
T ss_dssp SSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEECCS
T ss_pred cceEEEEcCCCccccceeHHHHHHHHHHhcCCcEEEEecc
Confidence 34566666555 6799999999999999999999997753
No 494
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=24.69 E-value=77 Score=22.73 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=25.1
Q ss_pred HHHHHhhcCCCCEEEecCCCc--hHHHHHHH-------hCCCcEEEecc
Q 036871 110 PLEQLLRDHKPDCLVADIFFP--WATDAAAK-------FGIPRLVFHGT 149 (383)
Q Consensus 110 ~l~~~l~~~~~D~vi~d~~~~--~~~~ia~~-------l~iP~v~~~~~ 149 (383)
+..+.+++.++|+||.|.... .+..+.+. .++|+|.++..
T Consensus 43 ~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~ 91 (147)
T 2zay_A 43 EAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGR 91 (147)
T ss_dssp HHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESS
T ss_pred HHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCC
Confidence 344555566899999997554 35545443 25777776654
No 495
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=24.64 E-value=55 Score=28.32 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCcccHHHHHHHHHHHHhCCC-eEEEEeCCC
Q 036871 6 PQLHVFFFPFMAHGHMIPIVDMAKLFASRGV-KASVITTPA 45 (383)
Q Consensus 6 ~~~~il~~~~~~~gH~~p~~~la~~L~~rGH-~Vt~~~~~~ 45 (383)
+++||.++=. |++-- .+|..|+.+|| +|+++-...
T Consensus 8 ~~~kI~VIGa---G~vG~--~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGS---GMIGG--TMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECC---SHHHH--HHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECC---CHHHH--HHHHHHHhCCCCeEEEEECCh
Confidence 3468888854 44443 28899999999 987776543
No 496
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=24.59 E-value=45 Score=29.70 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=27.0
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhC-CCeEEEEeCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASR-GVKASVITTP 44 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~r-GH~Vt~~~~~ 44 (383)
|..++++.+|+++=.+..| +..|..|+++ |++|+++-..
T Consensus 1 m~~m~~~~~v~IiGaG~~G-----l~aA~~L~~~~g~~v~v~E~~ 40 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFG-----LTIAERVATQLDKRVLVLERR 40 (399)
T ss_dssp ---CCCSCSEEEECCSHHH-----HHHHHHHHHHSCCCEEEECSS
T ss_pred CCcccccCCEEEECCCHHH-----HHHHHHHHHhCCCCEEEEeCC
Confidence 4444446688888766433 5778899998 9999998654
No 497
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.57 E-value=53 Score=26.65 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=27.5
Q ss_pred HHHHhhcCCCCEEEecCCCchHHHHHHHhCCCcEEEec
Q 036871 111 LEQLLRDHKPDCLVADIFFPWATDAAAKFGIPRLVFHG 148 (383)
Q Consensus 111 l~~~l~~~~~D~vi~d~~~~~~~~ia~~l~iP~v~~~~ 148 (383)
..+.+++.++|+||.|.. ...+|+++|+|.+.+.+
T Consensus 146 ~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 146 QINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 333455689999999854 68899999999998773
No 498
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=24.54 E-value=1.2e+02 Score=22.81 Aligned_cols=63 Identities=11% Similarity=0.024 Sum_probs=38.2
Q ss_pred CcEEEEEeCCcccCCHhhHHHHHHHHHhC-C-CcEEEEEec--CCCCCCchhhhccCchhHHHhhCCCCeEecCccc
Q 036871 286 NSVVYICFGSIANFTSAQLMEIATGLEAS-R-RNFIWVVRR--NKNDGGEEEKEAWLPEGFEKRMKGKGLIIRGWAP 358 (383)
Q Consensus 286 ~~vV~vs~GS~~~~~~~~~~~~~~a~~~~-~-~~viw~~~~--~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~~~P 358 (383)
..+|+++-||-.....+.+..+.+.+++. + ..|.+.+-. ... .+++.+++. ..+.|.+.++..
T Consensus 25 ~avlLv~HGS~~p~~~~~~~~la~~l~~~~~~~~V~~afle~~~~P---------sl~~~l~~l-G~~~VvVvPlfL 91 (156)
T 1tjn_A 25 RGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAARKRRP---------MPDEAIREM-NCDIIYVVPLFI 91 (156)
T ss_dssp EEEEEEECCTTSTTHHHHHHHHHHHHHHHTSSSEEEEEECSSSCSS---------CHHHHHHHC-CCSEEEEEECCS
T ss_pred cCEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEEEecCCCCC---------CHHHHHHHc-CCCEEEEEechh
Confidence 57999999997544455677777777664 3 456566433 221 144443333 445677777755
No 499
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=24.54 E-value=29 Score=30.42 Aligned_cols=44 Identities=14% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCCCCCCcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 1 MGSKVPQLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 1 m~~~~~~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
|.+..+..+|.++-.+-.+--.-..+|.++|.++||+|..+-..
T Consensus 12 ~~~~~~~~~vG~~l~~kk~~~~~~~~l~~al~~~G~~~~~iD~~ 55 (346)
T 2q7d_A 12 MQTFLKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLS 55 (346)
T ss_dssp GGGGGTTCEEEEECCHHHHHHHTHHHHHHHHHTTTCEEEECCTT
T ss_pred hccccCceEEEEEECcccchhhhHHHHHHHHHhCCcEEEEcccc
Confidence 33444566788887775544444779999999999999877654
No 500
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=24.54 E-value=59 Score=28.02 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCcccHHHHHHHHHHHHhCCCeEEEEeCC
Q 036871 7 QLHVFFFPFMAHGHMIPIVDMAKLFASRGVKASVITTP 44 (383)
Q Consensus 7 ~~~il~~~~~~~gH~~p~~~la~~L~~rGH~Vt~~~~~ 44 (383)
+.+|+++=.+..| +..|..|+++|++|+++-..
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4578887766544 67788999999999998754
Done!