Query 036872
Match_columns 392
No_of_seqs 17 out of 19
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 10:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036872.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036872hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bcgg1 c.3.1.3 (G:5-301) Guan 38.0 2.5 0.00018 29.4 -0.5 14 173-186 5-18 (297)
2 d1d5ta1 c.3.1.3 (A:-2-291,A:38 25.4 5.6 0.0004 28.4 -0.5 12 172-183 5-16 (336)
3 d1feca2 c.3.1.5 (A:170-286) Tr 25.3 3.8 0.00028 29.4 -1.5 29 158-187 4-32 (117)
4 d1b5qa1 c.3.1.2 (A:5-293,A:406 24.5 6 0.00044 27.1 -0.5 10 175-184 2-11 (347)
5 d1wlja_ c.55.3.5 (A:) Interfer 23.5 24 0.0017 25.5 2.8 18 249-266 144-161 (173)
6 d2ivda1 c.3.1.2 (A:10-306,A:41 23.2 6.6 0.00048 28.3 -0.5 9 175-183 2-10 (347)
7 d2v5za1 c.3.1.2 (A:6-289,A:402 22.5 7.1 0.00052 29.4 -0.5 9 175-183 1-9 (383)
8 d3lada2 c.3.1.5 (A:159-277) Di 21.7 6.2 0.00045 28.8 -1.0 28 159-187 9-36 (119)
9 d2igia1 c.55.3.5 (A:1-180) Oli 19.6 27 0.0019 24.7 2.2 19 249-267 157-175 (180)
10 d1z2la2 d.58.19.1 (A:213-329) 19.0 72 0.0052 22.3 4.6 45 293-337 54-107 (117)
No 1
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.96 E-value=2.5 Score=29.45 Aligned_cols=14 Identities=21% Similarity=0.413 Sum_probs=10.9
Q ss_pred hhhhhhhccccccc
Q 036872 173 RQDMAILGSEFLKL 186 (392)
Q Consensus 173 rqdvA~LGsgFLKL 186 (392)
.-||+|+|+|+-=|
T Consensus 5 ~yDviViGaG~~Gl 18 (297)
T d2bcgg1 5 DYDVIVLGTGITEC 18 (297)
T ss_dssp BCSEEEECCSHHHH
T ss_pred cCCEEEECcCHHHH
Confidence 45899999998543
No 2
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.44 E-value=5.6 Score=28.44 Aligned_cols=12 Identities=25% Similarity=0.573 Sum_probs=9.8
Q ss_pred hhhhhhhhcccc
Q 036872 172 ARQDMAILGSEF 183 (392)
Q Consensus 172 ArqdvA~LGsgF 183 (392)
..=||+|+|+|.
T Consensus 5 ~~yDvvIIGaG~ 16 (336)
T d1d5ta1 5 EEYDVIVLGTGL 16 (336)
T ss_dssp SBCSEEEECCSH
T ss_pred CcCCEEEECCCH
Confidence 346899999998
No 3
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}
Probab=25.28 E-value=3.8 Score=29.39 Aligned_cols=29 Identities=14% Similarity=0.373 Sum_probs=22.1
Q ss_pred HHHHhhhhhhhchhhhhhhhhhccccccch
Q 036872 158 IVLLSRSIMRLDARARQDMAILGSEFLKLN 187 (392)
Q Consensus 158 ~lLLsR~I~RLd~RArqdvA~LGsgFLKLD 187 (392)
.++-|..++.|+.-. +-|+|+|+||.=+.
T Consensus 4 ~~~ts~~~~~l~~~p-~~v~IiGgG~ig~E 32 (117)
T d1feca2 4 LCITSNEAFYLDEAP-KRALCVGGGYISIE 32 (117)
T ss_dssp GCBCHHHHTTCSSCC-SEEEEECSSHHHHH
T ss_pred EEEchHHhhCccccC-CeEEEECCChHHHH
Confidence 345677888888655 57999999998763
No 4
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}
Probab=24.47 E-value=6 Score=27.13 Aligned_cols=10 Identities=10% Similarity=0.395 Sum_probs=5.7
Q ss_pred hhhhhccccc
Q 036872 175 DMAILGSEFL 184 (392)
Q Consensus 175 dvA~LGsgFL 184 (392)
||+|+|+|.-
T Consensus 2 ~V~IIGaG~a 11 (347)
T d1b5qa1 2 RVIVVGAGMS 11 (347)
T ss_dssp CEEEECCBHH
T ss_pred CEEEECCcHH
Confidence 4566666553
No 5
>d1wlja_ c.55.3.5 (A:) Interferon-stimulated gene 20 kDa protein, ISG20 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.54 E-value=24 Score=25.51 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=14.8
Q ss_pred HHHhHHHHHHHHHHHHHH
Q 036872 249 QRAMEDALMALEFLKNIH 266 (392)
Q Consensus 249 rRAMEDa~mAle~VknIH 266 (392)
-||++|+.|++++.|-+.
T Consensus 144 H~Al~Da~at~~l~~~~~ 161 (173)
T d1wlja_ 144 HSSVEDARATMELYQISQ 161 (173)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 579999999999987443
No 6
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
Probab=23.19 E-value=6.6 Score=28.29 Aligned_cols=9 Identities=22% Similarity=0.678 Sum_probs=5.0
Q ss_pred hhhhhcccc
Q 036872 175 DMAILGSEF 183 (392)
Q Consensus 175 dvA~LGsgF 183 (392)
||||+|+|+
T Consensus 2 ~V~IIGaG~ 10 (347)
T d2ivda1 2 NVAVVGGGI 10 (347)
T ss_dssp CEEEECCBH
T ss_pred eEEEECCCH
Confidence 455555554
No 7
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=7.1 Score=29.45 Aligned_cols=9 Identities=22% Similarity=0.685 Sum_probs=6.1
Q ss_pred hhhhhcccc
Q 036872 175 DMAILGSEF 183 (392)
Q Consensus 175 dvA~LGsgF 183 (392)
||+|+|+|+
T Consensus 1 DViVIGaG~ 9 (383)
T d2v5za1 1 DVVVVGGGI 9 (383)
T ss_dssp SEEEECCBH
T ss_pred CEEEECCCH
Confidence 667777764
No 8
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=21.69 E-value=6.2 Score=28.78 Aligned_cols=28 Identities=11% Similarity=0.337 Sum_probs=21.9
Q ss_pred HHHhhhhhhhchhhhhhhhhhccccccch
Q 036872 159 VLLSRSIMRLDARARQDMAILGSEFLKLN 187 (392)
Q Consensus 159 lLLsR~I~RLd~RArqdvA~LGsgFLKLD 187 (392)
++-|..++.|+.-. +.++|+|+||+=+.
T Consensus 9 v~~s~~~l~l~~~p-~~i~IiG~G~ig~E 36 (119)
T d3lada2 9 IVDSTGALDFQNVP-GKLGVIGAGVIGLE 36 (119)
T ss_dssp EEEHHHHTSCSSCC-SEEEEECCSHHHHH
T ss_pred EEchhHhhCcccCC-CeEEEECCChHHHH
Confidence 44688888888665 66999999998654
No 9
>d2igia1 c.55.3.5 (A:1-180) Oligoribonuclease {Escherichia coli [TaxId: 562]}
Probab=19.62 E-value=27 Score=24.74 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=16.1
Q ss_pred HHHhHHHHHHHHHHHHHHH
Q 036872 249 QRAMEDALMALEFLKNIHD 267 (392)
Q Consensus 249 rRAMEDa~mAle~VknIHD 267 (392)
-|||.|+.++++.+|-..|
T Consensus 157 H~Al~Dv~~ti~~l~~yr~ 175 (180)
T d2igia1 157 HQAMDDIRESVAELAYYRE 175 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHH
Confidence 7999999999999985544
No 10
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]}
Probab=19.00 E-value=72 Score=22.30 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=33.9
Q ss_pred ceeeecCCcccccCCCC---------cchhHHHHHHHHHHHHHHhhhhcCCCCC
Q 036872 293 CIMLEKNGKTLDFFPGE---------VSTDRITAIQEAYWSMASALSEADGIDY 337 (392)
Q Consensus 293 ~i~lekng~t~~~~pge---------vs~dri~aiqeAY~~MASAlsEAdGidy 337 (392)
.+.....|...+..|++ .+.+.+..|.+...+.+..+++..|+.|
T Consensus 54 ~~~~~~g~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ 107 (117)
T d1z2la2 54 FGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGI 107 (117)
T ss_dssp CCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEecCCccceeCCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 33445556677888887 5678888888888888888888888765
Done!