BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036874
(233 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Query: 38 QQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVV---A 94
++G L + +DL IG T+TT+ T+ WA++ LL PE+ R+ EL + + A
Sbjct: 269 EEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGA 328
Query: 95 LDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAW 154
S V A+LP L A + E LRL P PL R + S++ GY IP+G + N
Sbjct: 329 SCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQ 388
Query: 155 AIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVL 214
+ VWE P +F+PDRFL+ G N + L FG G R+CL LA + VL
Sbjct: 389 GAHLDETVWEQPHEFRPDRFLEP-------GANPSALAFGCGARVCLGESLARLELFVVL 441
Query: 215 ANLLHLF 221
A LL F
Sbjct: 442 ARLLQAF 448
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 25 SSKDFLQTLLELQQQGDYS----------LSMDQIKALFMDLVIGSTDTTSITVEWAMSE 74
S + L TL++ + D LS + I D+ +TT+ V+W ++
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAF 299
Query: 75 LLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSA 134
LL P+V +K E+ Q V +L LEA ++E LRL P AP+L + +
Sbjct: 300 LLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV 359
Query: 135 TSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFG 194
S++ + + KG+ + IN WA+ N + W P F P+RFL + +YLPFG
Sbjct: 360 DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGT-QLISPSVSYLPFG 418
Query: 195 SGRRICLAIPLAEKIVPYVLANLLHLFEWSLPE 227
+G R C+ LA + + ++A LL F+ +P+
Sbjct: 419 AGPRSCIGEILARQELFLIMAWLLQRFDLEVPD 451
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYS----LSMDQIKALFMDLVIGSTDTTSITVEWAMSE 74
D+N S +D L + ++G + + ++I L D+ DT + + W++
Sbjct: 252 DKN---SVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308
Query: 75 LLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSA 134
L+ KPE+ RK EL V+ + +LP+LEA + ET R P +
Sbjct: 309 LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTR 368
Query: 135 TSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFG 194
+ L+G+ IPK +F+N W + +PE+WE+P +F+P+RFL + + + FG
Sbjct: 369 DTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFG 428
Query: 195 SGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229
G+R C+ LA+ + LA LL E+S+P G
Sbjct: 429 MGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV 463
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKP 79
R + D LQTLL+ + L+ D++ + + L++ T+S T W M L +
Sbjct: 224 RQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAW-MGFFLARD 282
Query: 80 EVMRKACNELGQVVALDSV--VEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSN 137
+ ++K C + V +++ + L L L+ +KETLRL PP ++ R
Sbjct: 283 KTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPI-MIMMRMARTPQT 341
Query: 138 LSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
++GYTIP G + ++ QR + W DF PDR+L+D G F Y+PFG+GR
Sbjct: 342 VAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD---NPASGEKFAYVPFGAGR 398
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230
C+ A + + + +L L+E+ L +G +
Sbjct: 399 HRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF 431
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 27 KDFLQTLLE------LQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPE 80
+D +L+E L + + LS ++I + +DL DT + + W++ L+ P
Sbjct: 252 RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPR 311
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V RK EL V+ + LP++EA + ET R P + ++L G
Sbjct: 312 VQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKG 371
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLK-DVKIGDFRGNNFNYLPFGSGRRI 199
+ IPKG +F+N W I + ++W NP +F P+RFL D I + FG G+R
Sbjct: 372 FYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKV--IIFGMGKRK 429
Query: 200 CLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
C+ +A V LA LL E+S+P G
Sbjct: 430 CIGETIARWEVFLFLAILLQRVEFSVPLG 458
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 13 PGQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAM 72
P Q +D E FL + + + + S + + ++ + DL TTS T+ W +
Sbjct: 242 PAQPPRDLTEA-----FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGL 296
Query: 73 SELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
++ P+V R+ E+ V+ E A +P+ A + E R PL +
Sbjct: 297 LLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMT 356
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFN--- 189
S + G+ IPKG+T+ N ++ ++ VWE P F P+ FL D +G+
Sbjct: 357 SRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL------DAQGHFVKPEA 410
Query: 190 YLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
+LPF +GRR CL PLA + +LL F +S+P G
Sbjct: 411 FLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 13 PGQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAM 72
P Q +D E FL + + + + S + + ++ + DL TTS T+ W +
Sbjct: 242 PAQPPRDLTEA-----FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGL 296
Query: 73 SELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
++ P+V R+ E+ V+ E A +P+ A + E R PL +
Sbjct: 297 LLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMT 356
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFN--- 189
S + G+ IPKG+T+ N ++ ++ VWE P F P+ FL D +G+
Sbjct: 357 SRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL------DAQGHFVKPEA 410
Query: 190 YLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
+LPF +GRR CL PLA + +LL F +S+P G
Sbjct: 411 FLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 24 KSSKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82
KS +D L L+ ++ + G S D+I +F+ ++ T+S T W + EL++ +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYT 142
+EL ++ V L ++P LE +KETLRLHPP +L R + G+
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
I +G + + R PE + +P DF P R+ + + D N + ++PFG+GR C+
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLL-NRWTWIPFGAGRHRCVG 396
Query: 203 IPLAEKIVPYVLANLLHLFEWSLPE 227
A + + + LL +E+ + +
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQ 421
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 24 KSSKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82
KS +D L L+ ++ + G S D+I +F+ ++ T+S T W + EL++ +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYT 142
+EL ++ V L ++P LE +KETLRLHPP +L R + G+
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
I +G + + R PE + +P DF P R+ + + D N + ++PFG+GR C+
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLL-NRWTWIPFGAGRHRCVG 396
Query: 203 IPLAEKIVPYVLANLLHLFEWSLPE 227
A + + + LL +E+ + +
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQ 421
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 24 KSSKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82
KS +D L L+ ++ + G S D+I +F+ ++ T+S T W + EL++ +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYT 142
+EL ++ V L ++P LE +KETLRLHPP +L R + G+
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
I +G + + R PE + +P DF P R+ + + D N + ++PFG+GR C+
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLL-NRWTWIPFGAGRHRCVG 396
Query: 203 IPLAEKIVPYVLANLLHLFEWSLPE 227
A + + + LL +E+ + +
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQ 421
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 24 KSSKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82
KS +D L L+ ++ + G S D+I +F+ ++ T+S T W + EL++ +
Sbjct: 220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279
Query: 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYT 142
+EL ++ V L ++P LE +KETLRLHPP +L R + G+
Sbjct: 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHR 338
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
I +G + + R PE + +P DF P R+ + + D N + ++PFG+GR C+
Sbjct: 339 IHEGDLVAASPAISNRIPEDFPDPHDFVPARY-EQPRQEDLL-NRWTWIPFGAGRHRCVG 396
Query: 203 IPLAEKIVPYVLANLLHLFEWSLPE 227
A + + + LL +E+ + +
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEMAQ 421
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M +L IG T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P++EA + E R P+ +RR +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ ++ ++ R+P + NPQDF P FL + G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--GQFKKSD-AFVPFSIGKRNC 417
Query: 201 LAIPLA 206
LA
Sbjct: 418 FGEGLA 423
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M L IG T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P++EA + E R P+ +RR +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ ++ ++ R+P + NPQDF P FL + G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--GQFKKSD-AFVPFSIGKRNC 417
Query: 201 LAIPLA 206
LA
Sbjct: 418 FGEGLA 423
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M L IG T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P++EA + E R P+ +RR +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ ++ ++ R+P + NPQDF P FL + G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--GQFKKSD-AFVPFSIGKRNC 417
Query: 201 LAIPLA 206
LA
Sbjct: 418 FGEGLA 423
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M L +G T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P++EA + E R P+ +RR +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ ++ ++ R+P + NPQDF P FL + G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--GQFKKSD-AFVPFSIGKRNC 417
Query: 201 LAIPLA 206
LA
Sbjct: 418 FGEGLA 423
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
Query: 33 LLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQV 92
L ++ QQ LS ++ A +L + + +TT+ ++ W + L + P+ R+ E+ V
Sbjct: 270 LCDIYQQD--HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSV 327
Query: 93 VALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFIN 152
+ + L +P+L+A +KE++RL P P T+R + L Y +PKG+ + +N
Sbjct: 328 LPDNQTPRAEDLRNMPYLKACLKESMRLTPSVP-FTTRTLDKPTVLGEYALPKGTVLTLN 386
Query: 153 AWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAE 207
+ + + +E+ F+P+R+L+ K + N F +LPFG G+R+C+ LAE
Sbjct: 387 TQVLGSSEDNFEDSHKFRPERWLQKEK----KINPFAHLPFGIGKRMCIGRRLAE 437
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 18/217 (8%)
Query: 11 LRPGQSGQD-------RNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDT 63
LRPG + +D E K++ D G L ++ + A D+ S DT
Sbjct: 243 LRPGAAPRDMMDAFILSAEKKAAGD--------SHGGGARLDLENVPATITDIFGASQDT 294
Query: 64 TSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPP 123
S ++W + + P+V + EL QVV D + LP++ A + E +R
Sbjct: 295 LSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSF 354
Query: 124 APLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL-KDVKIGD 182
P+ +A +++ GY IPK + +F+N W++ +P W NP++F P RFL KD I
Sbjct: 355 VPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLIN- 413
Query: 183 FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLH 219
+ + F G+R C+ L++ + ++ L H
Sbjct: 414 -KDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAH 449
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 20 RNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSEL---- 75
R +G D+ L L GD +S + IKA +++ G DTTS+T++W + E+
Sbjct: 249 RQKGSVHHDYRGILYRLL--GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNL 306
Query: 76 ----LQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRR 131
+ + EV+ G + + L +P L+A++KETLRLHP + L R
Sbjct: 307 KVQDMLRAEVLAARHQAQGDMATM--------LQLVPLLKASIKETLRLHPISVTL-QRY 357
Query: 132 PSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL-KDVKIGDFRGNNFNY 190
L Y IP + + + +A+ R P + +P++F P R+L KD I FR
Sbjct: 358 LVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRN----- 412
Query: 191 LPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
L FG G R CL +AE + L N+L F
Sbjct: 413 LGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 20 RNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSEL---- 75
R +G D+ L L GD +S + IKA +++ G DTTS+T++W + E+
Sbjct: 246 RQKGSVHHDYRGILYRLL--GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNL 303
Query: 76 ----LQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRR 131
+ + EV+ G + + L +P L+A++KETLRLHP + L R
Sbjct: 304 KVQDMLRAEVLAARHQAQGDMATM--------LQLVPLLKASIKETLRLHPISVTL-QRY 354
Query: 132 PSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFL-KDVKIGDFRGNNFNY 190
L Y IP + + + +A+ R P + +P++F P R+L KD I FR
Sbjct: 355 LVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRN----- 409
Query: 191 LPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
L FG G R CL +AE + L N+L F
Sbjct: 410 LGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 7/207 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M +L T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P+ EA + E R P+ + R + +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ +F ++ R+P + NP+DF P FL K G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLD--KKGQFKKSD-AFVPFSIGKRYC 417
Query: 201 LAIPLAEKIVPYVLANLLHLFEWSLPE 227
LA + ++ F + P+
Sbjct: 418 FGEGLARMELFLFFTTIMQNFRFKSPQ 444
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
Query: 25 SSKDFLQT-LLELQQQGDYSLSMDQIKALFM---DLVIGSTDTTSITVEWAMSELLQKPE 80
S +DF+ + L+ +Q++ + +K L M +L T+T S T+ + L++ PE
Sbjct: 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPE 300
Query: 81 VMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG 140
V K E+ +V+ + + AK+P++EA + E R P+ +RR +
Sbjct: 301 VEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRD 360
Query: 141 YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ +PKG+ ++ ++ R+P + NPQDF P FL + G F+ ++ ++PF G+R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK--GQFKKSD-AFVPFSIGKRNC 417
Query: 201 LAIPLA 206
LA
Sbjct: 418 FGEGLA 423
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 44 LSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFH 103
LS++ IKA M+L GS DTT+ + + EL + P+V + E A S +
Sbjct: 273 LSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKA 332
Query: 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW 163
+LP L A +KETLRL+P L R S+ L Y IP G+ + + +++ RN ++
Sbjct: 333 TTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALF 391
Query: 164 ENPQDFQPDRFLKDVKIGDFRGN--NFNYLPFGSGRRICLA 202
P+ + P R+L D RG+ NF+++PFG G R CL
Sbjct: 392 PRPERYNPQRWL------DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 24 KSSKDFLQTLLELQQ----QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKP 79
K DFLQ +++ Q + +LS ++ A + + +TTS + + M EL P
Sbjct: 244 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 303
Query: 80 EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS 139
+V +K E+ V+ + + ++ +L+ V ETLRL P A + R ++
Sbjct: 304 DVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVEIN 362
Query: 140 GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRI 199
G IPKG + I ++A+ R+P+ W P+ F P+RF K K + + Y PFGSG R
Sbjct: 363 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI---DPYIYTPFGSGPRN 419
Query: 200 CLAIPLAEKIVPYVLANLLHLFEW 223
C+ + A + L +L F +
Sbjct: 420 CIGMRFALMNMKLALIRVLQNFSF 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 24 KSSKDFLQTLLELQQ----QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKP 79
K DFLQ +++ Q + +LS ++ A + + +TTS + + M EL P
Sbjct: 245 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 304
Query: 80 EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS 139
+V +K E+ V+ + + ++ +L+ V ETLRL P A L R ++
Sbjct: 305 DVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRL-ERVCKKDVEIN 363
Query: 140 GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRI 199
G IPKG + I ++A+ R+P+ W P+ F P+RF K K + + Y PFGSG R
Sbjct: 364 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI---DPYIYTPFGSGPRN 420
Query: 200 CLAIPLAEKIVPYVLANLLHLFEW 223
C+ + A + L +L F +
Sbjct: 421 CIGMRFALMNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 24 KSSKDFLQTLLELQQ----QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKP 79
K DFLQ +++ Q + +LS ++ A + + +TTS + + M EL P
Sbjct: 246 KHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHP 305
Query: 80 EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS 139
+V +K E+ V+ + + ++ +L+ V ETLRL P A L R ++
Sbjct: 306 DVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRL-ERVCKKDVEIN 364
Query: 140 GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRI 199
G IPKG + I ++A+ R+P+ W P+ F P+RF K K + + Y PFGSG R
Sbjct: 365 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI---DPYIYTPFGSGPRN 421
Query: 200 CLAIPLAEKIVPYVLANLLHLFEW 223
C+ + A + L +L F +
Sbjct: 422 CIGMRFALMNMKLALIRVLQNFSF 445
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 3 SAKIFESLLRPGQSGQDRNEGKSSKDFLQTLLELQQQG--DYSLSMDQIKALFM--DLVI 58
+A +++ L R + + + + F+ L+ QG D S + + +F +L+I
Sbjct: 224 AAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELII 283
Query: 59 GSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETL 118
T+TT+ + WA+ + P + + E+ ++ + K+P+ EA + E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 119 RLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDV 178
R PL S + + GY+IPKG+T+ N +++ + + W +P+ F P+RFL
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS- 402
Query: 179 KIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPE 227
+ +PF GRR CL LA + LL F P
Sbjct: 403 --SGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 3 SAKIFESLLRPGQSGQDRNEGKSSKDFLQTLLELQQQG--DYSLSMDQIKALFM--DLVI 58
+A +++ L R + + + + F+ L+ QG D S + + +F +L+I
Sbjct: 224 AAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELII 283
Query: 59 GSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETL 118
T+TT+ + WA+ + P + + E+ ++ + K+P+ EA + E L
Sbjct: 284 AGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVL 343
Query: 119 RLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDV 178
R PL S + + GY+IPKG+T+ N +++ + + W +P+ F P+RFL
Sbjct: 344 RFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS- 402
Query: 179 KIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPE 227
+ +PF GRR CL LA + LL F P
Sbjct: 403 --SGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPH 449
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 17 GQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELL 76
+ R G+ D L LLE + + +I + ++ ++T + T+ W + L
Sbjct: 232 AERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALA 291
Query: 77 QKPEVMRKACNEL-----GQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRR 131
PE + +E+ G+ VA + V + H + + E +RL P +LT RR
Sbjct: 292 DHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNV------IVEAMRLRPAVWVLT-RR 344
Query: 132 PSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNN---F 188
A S L GY IP G+ I + +AIQR+P+ +++ +F PDR+L + R N +
Sbjct: 345 AVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPE------RAANVPKY 398
Query: 189 NYLPFGSGRRIC 200
PF +G+R C
Sbjct: 399 AMKPFSAGKRKC 410
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 27 KDFLQT-LLELQQQGDYSLS---MDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82
+DF+ L++++Q+ D S ++ + DL + T+TTS T+ + + LL+ PEV
Sbjct: 243 RDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVT 302
Query: 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYT 142
K E+ V+ + +P+ +A V E R P + + Y
Sbjct: 303 AKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYL 362
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
IPKG+TI ++ + + + NP F P FL K G+F+ +++ ++PF +G+RIC
Sbjct: 363 IPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLD--KNGNFKKSDY-FMPFSAGKRICAG 419
Query: 203 IPLAEKIVPYVLANLLHLF 221
LA + L +L F
Sbjct: 420 EGLARMELFLFLTTILQNF 438
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 11 LRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYS-LSMDQIKALFMDLVIGSTDTTSITVE 69
++ Q D N + D +E ++Q S +++ + DL+ T+TTS T+
Sbjct: 231 VKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLR 290
Query: 70 WAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTS 129
+A+ LL+ PEV K E+ +VV + +P+ +A V E R P
Sbjct: 291 YALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLP 350
Query: 130 RRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFN 189
+ Y IPKG+TI + ++ + + + NP+ F P FL + G+F+ +N+
Sbjct: 351 HAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEG--GNFKKSNY- 407
Query: 190 YLPFGSGRRICLAIPLA 206
++PF +G+RIC+ LA
Sbjct: 408 FMPFSAGKRICVGEGLA 424
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 10 LLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYS----LSMDQIKALFMDLVIGSTDTTS 65
+L + Q+ + + +DF+ L ++ ++ +++ ++ +DL T+TTS
Sbjct: 225 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTS 284
Query: 66 ITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAP 125
T+ +A+ LL+ PEV K E+ +V+ + + +P+ +A V E R
Sbjct: 285 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRY---ID 341
Query: 126 LLTSRRPSATS---NLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGD 182
LL + P A + Y IPKG+TI I+ ++ + + + NP+ F P FL + G+
Sbjct: 342 LLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG--GN 399
Query: 183 FRGNNFNYLPFGSGRRICLAIPLA 206
F+ + + ++PF +G+RIC+ LA
Sbjct: 400 FKKSKY-FMPFSAGKRICVGEALA 422
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 46 MDQIKALFMDLVIGSTDTTSITVEWAMSEL--------LQKPEVMRKACNELGQVVALDS 97
++ +KA +++ G +TTS+T++W + E+ + + EV+ G + +
Sbjct: 274 LEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM-- 331
Query: 98 VVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQ 157
L +P L+A++KETLRLHP + L R P + L Y IP + + + +A+
Sbjct: 332 ------LQMVPLLKASIKETLRLHPISVTL-QRYPESDLVLQDYLIPAKTLVQVAIYAMG 384
Query: 158 RNPEVWENPQDFQPDRFL-KDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLAN 216
R+P + +P F P R+L KD + FR L FG G R C+ +AE + L +
Sbjct: 385 RDPAFFSSPDKFDPTRWLSKDKDLIHFRN-----LGFGWGVRQCVGRRIAELEMTLFLIH 439
Query: 217 LLHLFE 222
+L F+
Sbjct: 440 ILENFK 445
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 10 LLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYS----LSMDQIKALFMDLVIGSTDTTS 65
+L + Q+ + + +DF+ L ++ ++ +++ ++ +DL T+TTS
Sbjct: 227 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTS 286
Query: 66 ITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAP 125
T+ +A+ LL+ PEV K E+ +V+ + + +P+ +A V E R
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRY---ID 343
Query: 126 LLTSRRPSATS---NLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGD 182
LL + P A + Y IPKG+TI I+ ++ + + + NP+ F P FL + G+
Sbjct: 344 LLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEG--GN 401
Query: 183 FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+ + + ++PF +G+RIC+ LA + L ++L F
Sbjct: 402 FKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSILQNF 439
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ E AK+P+ EA
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E R P+ + ++ GY IPK + +F+ +P +E P F PD
Sbjct: 334 IYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL D G + ++PF G+RICL +A + +L F + P
Sbjct: 394 FL-DAN-GALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 443
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 104/200 (52%), Gaps = 10/200 (5%)
Query: 27 KDFLQT-LLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKA 85
+DF+ L++++Q+ + +++ + DL T+TTS T+ +++ LL+ PEV +
Sbjct: 243 RDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARV 302
Query: 86 CNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATS---NLSGYT 142
E+ +V+ +++P+ +A + E R LL + P A + Y
Sbjct: 303 QEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRF---IDLLPTNLPHAVTRDVRFRNYF 359
Query: 143 IPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLA 202
IPKG+ I + ++ + + + NP+ F P FL + G+F+ +++ ++PF +G+R+C+
Sbjct: 360 IPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDES--GNFKKSDY-FMPFSAGKRMCVG 416
Query: 203 IPLAEKIVPYVLANLLHLFE 222
LA + L ++L F+
Sbjct: 417 EGLARMELFLFLTSILQNFK 436
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 53 FMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEA 112
F+ I +T++ + + + EL ++PE++ + E+ +V+ ++ L +L +L
Sbjct: 248 FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQ 307
Query: 113 NVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPD 172
+KE+LRL+PPA T R + + G +P + + + + + R +E+P F PD
Sbjct: 308 VLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPD 366
Query: 173 RFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
RF F Y PF G R C+ A+ V V+A LL E+ L G
Sbjct: 367 RFGPGAP-----KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSL-SMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
D N + D L +E ++ L +MD I DL T+TTS T+ + + L++
Sbjct: 237 DPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMK 296
Query: 78 KPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSN 137
PE+ K E+ +V+ + ++P+++A V E R P + +
Sbjct: 297 YPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTI 356
Query: 138 LSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
GY IPKG+ + ++ + + + +P+ F+P+ FL + G F+ +++ + PF +G+
Sbjct: 357 FRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNEN--GKFKYSDY-FKPFSTGK 413
Query: 198 RICLAIPLAEKIVPYVLANLLHLF 221
R+C LA + +L +L F
Sbjct: 414 RVCAGEGLARMELFLLLCAILQHF 437
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ AK+P+ +A
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E RL P + + GY IPK + +F + +P +E P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL G + N ++PF G+RICL +A + +L F + P
Sbjct: 394 FLD--ANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ AK+P+ +A
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E RL P + + GY IPK + +F + +P +E P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL G + N ++PF G+RICL +A + +L F + P
Sbjct: 394 FLD--ANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ AK+P+ +A
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E RL P + + GY IPK + +F + +P +E P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL G + N ++PF G+RICL +A + +L F + P
Sbjct: 394 FLD--ANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ AK+P+ +A
Sbjct: 274 LSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E RL P + + GY IPK + +F + +P +E P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL G + N ++PF G+RICL +A + +L F + P
Sbjct: 394 FLD--ANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Query: 54 MDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEAN 113
+ L T+TTS T+ + +L+ P V + E+ QV+ AK+P+ +A
Sbjct: 274 LSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV 333
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
+ E RL P + + GY IPK + +F + +P +E P F P
Sbjct: 334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGH 393
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLP 226
FL G + N ++PF G+RIC +A + +L F + P
Sbjct: 394 FLD--ANGALKRNE-GFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
++ N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 222 EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMH 281
Query: 78 KP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
E +RK E + ++V++E +PF E +E++R PP L+ R+
Sbjct: 282 PANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKV 335
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYL 191
A + Y +PKG I + + E + P+ + P+R D K+ G F G
Sbjct: 336 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG------ 386
Query: 192 PFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V +LA +++ L
Sbjct: 387 -FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
++ N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 223 EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMH 282
Query: 78 KP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
E +RK E + ++V++E +PF E +E++R PP L+ R+
Sbjct: 283 PANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKV 336
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYL 191
A + Y +PKG I + + E + P+ + P+R D K+ G F G
Sbjct: 337 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG------ 387
Query: 192 PFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V +LA +++ L
Sbjct: 388 -FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
++ N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 223 EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMH 282
Query: 78 KP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
E +RK E + ++V++E +PF E +E++R PP L+ R+
Sbjct: 283 PANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKV 336
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYL 191
A + Y +PKG I + + E + P+ + P+R D K+ G F G
Sbjct: 337 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG------ 387
Query: 192 PFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V +LA +++ L
Sbjct: 388 -FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
++ N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 236 EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMH 295
Query: 78 KP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
E +RK E + ++V++E +PF E +E++R PP L+ R+
Sbjct: 296 PANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKV 349
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYL 191
A + Y +PKG I + + E + P+ + P+R D K+ G F G
Sbjct: 350 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG------ 400
Query: 192 PFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V +LA +++ L
Sbjct: 401 -FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQ 77
++ N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 224 EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMH 283
Query: 78 KP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
E +RK E + ++V++E +PF E +E++R PP L+ R+
Sbjct: 284 PANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKV 337
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYL 191
A + Y +PKG I + + E + P+ + P+R D K+ G F G
Sbjct: 338 MADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG------ 388
Query: 192 PFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V +LA +++ L
Sbjct: 389 -FGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 21 NEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKP- 79
N+ S+ D L LL + +S+ ++ + + + T+SIT W+M L+
Sbjct: 239 NKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPAN 298
Query: 80 ----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSAT 135
E +RK E + ++V++E +PF E +E++R PP L+ R+ A
Sbjct: 299 VKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKVMAD 352
Query: 136 SNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNNFNYLPFG 194
+ Y +PKG I + + E + P+ + P+R D K+ G F G FG
Sbjct: 353 VKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER---DEKVEGAFIG-------FG 402
Query: 195 SGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
+G C+ V +LA +++ L
Sbjct: 403 AGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 14 GQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMS 73
+ ++ ++ ++ D L LL+ + +S+ ++ + + + T++IT W+M
Sbjct: 223 AREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSML 282
Query: 74 ELLQKP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLT 128
L+ + + K +E + D+V++E +PF E V+E++R PP L+
Sbjct: 283 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LMV 336
Query: 129 SRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNN 187
R A + Y +PKG I + + E + NP+ + P+R D K+ G F G
Sbjct: 337 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIG-- 391
Query: 188 FNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ A V +LA +++ L
Sbjct: 392 -----FGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 20 RNEGKSSKDFLQTLLELQQQGDYSLS-MDQIKALFMDLVI--GSTDTTSITVEWAMSELL 76
R+E ++ + L+ L+ + +LS D ++ LV+ S T W++ +++
Sbjct: 226 RHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMI 285
Query: 77 QKPEVMRKACNEL-------GQVVALDS---VVEEFHLAKLPFLEANVKETLRLHPPAPL 126
+ PE M+ A E+ GQ V+L+ + + L LP L++ +KE+LRL +
Sbjct: 286 RNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLN 345
Query: 127 LTSRRPSATSNL--SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKD--VKIGD 182
+ + + T +L Y I K I + + +PE++ +P F+ DR+L +
Sbjct: 346 IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTT 405
Query: 183 FRGNN----FNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
F N + Y+PFGSG IC A + L +L FE L EG
Sbjct: 406 FYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 14 GQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMS 73
+ ++ ++ ++ D L LL+ + +S+ ++ + + + T++IT W+M
Sbjct: 217 AREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSML 276
Query: 74 ELLQKP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLT 128
L+ + + K +E + D+V++E +PF E V+E++R PP L+
Sbjct: 277 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LMV 330
Query: 129 SRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNN 187
R A + Y +PKG I + + E + NP+ + P+R D K+ G F G
Sbjct: 331 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIG-- 385
Query: 188 FNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ A V +LA +++ L
Sbjct: 386 -----FGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 14 GQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMS 73
+ ++ ++ ++ D L LL+ + +S+ ++ + + + T++IT W+M
Sbjct: 232 AREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSML 291
Query: 74 ELLQKP-----EVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLT 128
L+ + + K +E + D+V++E +PF E V+E++R PP L+
Sbjct: 292 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPL-LMV 345
Query: 129 SRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI-GDFRGNN 187
R A + Y +PKG I + + E + NP+ + P+R D K+ G F G
Sbjct: 346 MRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER---DEKVDGAFIG-- 400
Query: 188 FNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ A V +LA +++ L
Sbjct: 401 -----FGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 20 RNEGKSSKDFLQTLLELQQQGDYSLS-MDQIKALFMDLVI--GSTDTTSITVEWAMSELL 76
R+E ++ + L+ L+ + +LS D ++ LV+ S T W++ +++
Sbjct: 226 RHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMI 285
Query: 77 QKPEVMRKACNEL-------GQVVALDS---VVEEFHLAKLPFLEANVKETLRLHPPAPL 126
+ PE M+ A E+ GQ V+L+ + + L LP L++ +KE+LRL +
Sbjct: 286 RNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLN 345
Query: 127 LTSRRPSATSNL--SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKD--VKIGD 182
+ + + T +L Y I K I + + +PE++ +P F+ DR+L +
Sbjct: 346 IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTT 405
Query: 183 FRGNN----FNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228
F N + Y+PFGSG IC A + L +L FE L EG
Sbjct: 406 FYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGKQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I +TTS + +A+ L++
Sbjct: 227 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P AP + T
Sbjct: 287 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 345
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 400
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I +TTS + +A+ L++
Sbjct: 225 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 284
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P AP + T
Sbjct: 285 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 398
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 228 GEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHV 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LR+ P AP + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ VW ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + + + L++ P V
Sbjct: 233 GEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHV 292
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 293 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 351
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG I + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 352 PLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 406
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 407 IGQQFALHEATLVLGMMLKHFDF 429
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + P+G+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPYGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I +TTS + +A+ L++
Sbjct: 227 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P +P + T
Sbjct: 287 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLG 345
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 400
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I ++TS + +A+ L++
Sbjct: 224 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKN 283
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P AP + T
Sbjct: 284 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 397
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I ++TS + +A+ L++
Sbjct: 224 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKN 283
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P AP + T
Sbjct: 284 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 397
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I ++TS + +A+ L++
Sbjct: 225 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKN 284
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P AP + T
Sbjct: 285 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 398
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 6/205 (2%)
Query: 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRK 84
S +D L LL + + LS+ ++K + L+ +T + + L Q ++ +
Sbjct: 220 SEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRER 279
Query: 85 ACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIP 144
E ++ + E L K+P+L+ ++E LRL PP R G+ P
Sbjct: 280 VRQEQNKLQLSQELTAE-TLKKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFP 337
Query: 145 KGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNN-FNYLPFGSGRRICLAI 203
KG + +P+++ +P+ F P+RF D G N F ++PFG G R CL
Sbjct: 338 KGWLVSYQISQTHADPDLYPDPEKFDPERFTPD---GSATHNPPFAHVPFGGGLRECLGK 394
Query: 204 PLAEKIVPYVLANLLHLFEWSLPEG 228
A + L+ F+W+L G
Sbjct: 395 EFARLEMKLFATRLIQQFDWTLLPG 419
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
Query: 20 RNEGKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+ G+ S D L +L + + L + I+ + +I +TTS + +A+ L++
Sbjct: 227 KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKN 286
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P V++KA E +V+ +D V + +L ++ + E LRL P P + T
Sbjct: 287 PHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLG 345
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
Y + KG + + + R+ +W ++ ++F+P+RF I + PFG+G+
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQ 400
Query: 198 RICLAIPLAEKIVPYVLANLLHLFEW 223
R C+ A VL +L F++
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
A VL +L F++
Sbjct: 401 EGQQFALHEATLVLGMMLKHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I + TS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I + TS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I + TS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
A VL +L F++
Sbjct: 402 PGQQFALHEATLVLGMMLKHFDF 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I + TS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + P+G+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPWGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 30/188 (15%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
D G+ +D L L+ + L+ +++ + L++ +TT + M LL
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ Q+ AL A + L+ V+E LR P T R P +L
Sbjct: 283 PD----------QLAALR--------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP G T+ + R PE + +P F D R + +L FG G
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRF------------DIRRDTAGHLAFGHGIH 372
Query: 199 ICLAIPLA 206
C+ PLA
Sbjct: 373 FCIGAPLA 380
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 30/188 (15%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
D G+ +D L L+ + L+ +++ + L++ +TT + M LL
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ Q+ AL A + L+ V+E LR P T R P +L
Sbjct: 283 PD----------QLAALR--------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP G T+ + R PE + +P F D R + +L FG G
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRF------------DIRRDTAGHLAFGHGIH 372
Query: 199 ICLAIPLA 206
C+ PLA
Sbjct: 373 FCIGAPLA 380
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + P G+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPHGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 30/188 (15%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
D G+ +D L L+ + L+ +++ + L++ +TT + M LL
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ Q+ AL A + L+ V+E LR P T R P +L
Sbjct: 283 PD----------QLAALR--------ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP G T+ + R PE + +P F D R + +L FG G
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRF------------DIRRDTAGHLAFGHGIH 372
Query: 199 ICLAIPLA 206
C+ PLA
Sbjct: 373 FCIGAPLA 380
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 28 DFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACN 87
DF L+ +++GD L+ + + ++++I + DT S+++ + + + + P V
Sbjct: 277 DFATELILAEKRGD--LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIK 334
Query: 88 ELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
E+ V+ + ++ + KL +E + E++R P L+ R+ + GY + KG+
Sbjct: 335 EIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGT 392
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAE 207
I +N + R E + P +F + F K+V F+ PFG G R C +A
Sbjct: 393 NIILNIGRMHR-LEFFPKPNEFTLENFAKNVPYRYFQ-------PFGFGPRGCAGKYIAM 444
Query: 208 KIVPYVLANLLHLFEWSLPEG-CYE 231
++ +L LL F +G C E
Sbjct: 445 VMMKAILVTLLRRFHVKTLQGQCVE 469
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + P G+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPAGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L I + +I +TTS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++K E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 18 QDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELL- 76
++ + ++ D L LL + +S ++ + + + T++IT W++ L+
Sbjct: 222 EEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMD 281
Query: 77 ----QKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRP 132
+ + + +E + D+V+EE +PF E +E++R PP +L R+
Sbjct: 282 PRNKRHLAKLHQEIDEFPAQLNYDNVMEE-----MPFAEQCARESIRRDPPLVMLM-RKV 335
Query: 133 SATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLP 192
+ Y +P+G I + ++ E + NP+++ P+R +K V G F G
Sbjct: 336 LKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVD-GAFCG------- 387
Query: 193 FGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
FG+G C+ V VLA +L +++ L
Sbjct: 388 FGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + + + TS + +A+ L++ P
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHE 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ VW ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
D +D + L+ +++ GD L+ D+I A L+I +TT + A +L+
Sbjct: 217 DERRRTPGEDLMSGLVAVEESGD-QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRT 275
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P GQ AL A A ++ET+R PP L+ SR +
Sbjct: 276 P----------GQWAAL--------AADGSRASAVIEETMRYDPPVQLV-SRYAGDDLTI 316
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
+T+PKG T+ + A R+P + P F PDR +L FG G
Sbjct: 317 GTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR------------AQIRHLGFGKGAH 364
Query: 199 ICLAIPLA 206
CL PLA
Sbjct: 365 FCLGAPLA 372
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + + + TS + +A+ L++ P V
Sbjct: 228 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHV 287
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P P + T Y
Sbjct: 288 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 346
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 347 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 401
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + + + TS + +A+ L++ P V
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHV 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P P + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 23 GKSSKDFLQTLLELQQ-QGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEV 81
G+ S D L +L + + L + I+ + + + TS + +A+ L++ P
Sbjct: 227 GEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHE 286
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
++KA E +V+ +D V + +L ++ + E LRL P AP + T Y
Sbjct: 287 LQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 142 TIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ KG + + + R+ +W ++ ++F+P+RF I + PFG+G+R C
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIP-----QHAFKPFGNGQRAC 400
Query: 201 LAIPLAEKIVPYVLANLLHLFEW 223
+ A VL +L F++
Sbjct: 401 IGQQFALHEATLVLGMMLKHFDF 423
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 28 DFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACN 87
D + L + +G +LS I AL +++++ +T+ T+ + LL PE M
Sbjct: 239 DLISILCTSEYEG-MALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV-- 295
Query: 88 ELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
LA + + ETLR PP L+ R+ S + + G I K +
Sbjct: 296 ----------------LADRSLVPRAIAETLRYKPPVQLIP-RQLSQDTVVGGMEIKKDT 338
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAE 207
+F A R+PE +E P F R +D+ I +L FGSG C+ A+
Sbjct: 339 IVFCMIGAANRDPEAFEQPDVFNIHR--EDLGIKSAFSGAARHLAFGSGIHNCVGTAFAK 396
Query: 208 KIVPYVLANLL 218
+ ++AN++
Sbjct: 397 NEIE-IVANIV 406
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ +T+ + LL
Sbjct: 201 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTH 260
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ + +V D + LP V+E LR P P T+R + +
Sbjct: 261 PDQL--------ALVRRDP-------SALP---NAVEEILRYIAP-PETTTRFAAEEVEI 301
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P+ + +P F R D RG +L FG G
Sbjct: 302 GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--------DTRG----HLSFGQGIH 349
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 350 FCMGRPLAK 358
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ + + + LL
Sbjct: 200 ERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 259
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P ++L V A S L V+E LR P P T+R + +
Sbjct: 260 P-------DQLALVRADPSA-----------LPNAVEEILRYIAP-PETTTRFAAEEVEI 300
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P + +P F R D RG +L FG G
Sbjct: 301 GGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR--------DTRG----HLSFGQGIH 348
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 349 FCMGRPLAK 357
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 115 KETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 174
+E LRL+PPA +LT RR L +P+G+T+ ++ + QR + + FQP+RF
Sbjct: 259 QEALRLYPPAWILT-RRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERF 315
Query: 175 LKDVKIGDFRGN-NFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
L + RG + Y PFG G+R+CL A P VL F
Sbjct: 316 LAE------RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ +++ + LL
Sbjct: 200 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTH 259
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ + +V D + LP V+E LR P P T+R + +
Sbjct: 260 PDQL--------ALVRRDP-------SALP---NAVEEILRYIAP-PETTTRFAAEEVEI 300
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P+ + +P F R D RG +L FG G
Sbjct: 301 GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--------DTRG----HLSFGQGIH 348
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 349 FCMGRPLAK 357
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ +++ + LL
Sbjct: 201 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTH 260
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ + +V D + LP V+E LR P P T+R + +
Sbjct: 261 PDQL--------ALVRRDP-------SALP---NAVEEILRYIAP-PETTTRFAAEEVEI 301
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P+ + +P F R D RG +L FG G
Sbjct: 302 GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--------DTRG----HLSFGQGIH 349
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 350 FCMGRPLAK 358
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ + + + LL
Sbjct: 200 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 259
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ + +V D + LP V+E LR P P T+R + +
Sbjct: 260 PDQL--------ALVRRDP-------SALP---NAVEEILRYIAP-PETTTRFAAEEVEI 300
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P+ + +P F R D RG +L FG G
Sbjct: 301 GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--------DTRG----HLSFGQGIH 348
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 349 FCMGRPLAK 357
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R + D L L+ +Q D LS D++ ++ + L++ + + + LL
Sbjct: 201 ERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 260
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
P+ + +V D + LP V+E LR P P T+R + +
Sbjct: 261 PDQL--------ALVRRDP-------SALP---NAVEEILRYIAP-PETTTRFAAEEVEI 301
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G IP+ ST+ + A R+P+ + +P F R D RG +L FG G
Sbjct: 302 GGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR--------DTRG----HLSFGQGIH 349
Query: 199 ICLAIPLAE 207
C+ PLA+
Sbjct: 350 FCMGRPLAK 358
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 115 KETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 174
+E LRL+PPA +LT RR L +P G+T+ ++ + QR + + + F+P+RF
Sbjct: 259 QEALRLYPPAWILT-RRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERF 315
Query: 175 LKDVKIGDFRGN-NFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
L++ RG + Y PFG G+R+CL A P VL F
Sbjct: 316 LEE------RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 273 YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 332 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 378
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 34/179 (18%)
Query: 44 LSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFH 103
L+MD+ M L+IG +TT+ + + + + P+++ A
Sbjct: 173 LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDA------------------ 214
Query: 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW 163
L V+ETLR + P L R + S ++ I KG + + + R+ +
Sbjct: 215 ---LKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFF 271
Query: 164 ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFE 222
+ P F+ G +L FG G +CL PLA L ++L+ F+
Sbjct: 272 DEPDLFKI-------------GRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 111 EANVKETLRLHPPAPLLTS--RRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
E V+E R +P P L + ++ +N KG+++ ++ + +P +W++P +
Sbjct: 277 EMFVQEVRRYYPFGPFLGALVKKDFVWNNCE---FKKGTSVLLDLYGTNHDPRLWDHPDE 333
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGR----RICLAIPLAEKIVPYVLANLLHLFEWS 224
F+P+RF + N F+ +P G G C + +++ L L+H E+
Sbjct: 334 FRPERF------AEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYD 387
Query: 225 LPE 227
+PE
Sbjct: 388 VPE 390
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 324 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 370
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 324 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 370
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 324 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 370
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 332 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 378
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ E V+E R +P P + +R S G P+G + ++ + + W +PQ+
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLF 221
F+P+RF + ++FN++P G G E IV ++ HL
Sbjct: 332 FRPERFRA------WDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLL 378
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+L+A ++E LR PP + T R+ L TI +G + + + R+ EV+ + +
Sbjct: 240 YLKA-IEEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
F PDR N +L FGSG +CL PLA
Sbjct: 298 FIPDR------------NPNPHLSFGSGIHLCLGAPLA 323
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+L+A ++E LR PP + T R+ L TI +G + + + R+ EV+ + +
Sbjct: 240 YLKA-IEEALRYSPPV-MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEK 297
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
F PDR N +L FGSG +CL PLA
Sbjct: 298 FIPDR------------NPNPHLSFGSGIHLCLGAPLA 323
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 35/181 (19%)
Query: 44 LSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFH 103
LS ++++ + ++ +TT ++ A+ LL +P+ + A G+V D V
Sbjct: 227 LSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQL--ALVRKGEVTWADVV----- 279
Query: 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS---GYTIPKGSTIFINAWAIQRNP 160
+ETLR P L R A ++++ G TI +G I + A R+P
Sbjct: 280 -----------EETLRHEPAVKHLPLR--YAVTDIALPDGRTIARGEPILASYAAANRHP 326
Query: 161 EVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHL 220
+ E+ F R +K+ +L FG G CL PLA V L +L
Sbjct: 327 DWHEDADTFDATRTVKE------------HLAFGHGVHFCLGAPLARMEVTLALESLFGR 374
Query: 221 F 221
F
Sbjct: 375 F 375
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 29/159 (18%)
Query: 48 QIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKL 107
+++ L +++ +TT+ + AM + Q P+ K + E LA
Sbjct: 242 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMK-------------IKENPELAP- 287
Query: 108 PFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQ 167
V+E LR P P+ +R + ++G IP G+ +F+ A R+P V+ +
Sbjct: 288 ----QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-- 341
Query: 168 DFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
DRF VK + FG G CL LA
Sbjct: 342 ---ADRFDITVK------REAPSIAFGGGPHFCLGTALA 371
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 29/159 (18%)
Query: 48 QIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKL 107
+++ L +++ +TT+ + AM + Q P+ K + E LA
Sbjct: 232 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMK-------------IKENPELAP- 277
Query: 108 PFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQ 167
V+E LR P P+ +R + ++G IP G+ +F+ A R+P V+ +
Sbjct: 278 ----QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD-- 331
Query: 168 DFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
DRF VK + FG G CL LA
Sbjct: 332 ---ADRFDITVK------REAPSIAFGGGPHFCLGTALA 361
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 110 LEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAI--QRNPEVWENPQ 167
+ A V+E LR PP P + R + + ++G IP + + +N W + R+ + ++P
Sbjct: 274 IPAIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPD 330
Query: 168 DFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
F P R + L FG G CL PLA
Sbjct: 331 RFDPSR----------KSGGAAQLSFGHGVHFCLGAPLA 359
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 110 LEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAI--QRNPEVWENPQ 167
+ A V+E LR PP P + R + + ++G IP + + +N W + R+ + ++P
Sbjct: 294 IPAIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPD 350
Query: 168 DFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
F P R + L FG G CL PLA
Sbjct: 351 RFDPSR----------KSGGAAQLSFGHGVHFCLGAPLA 379
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 68/188 (36%), Gaps = 31/188 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R D L LL+ + G LS ++ AL ++ TDTT + +A+ LL+
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGS-RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRS 273
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
PE + E G + + E LR + T R
Sbjct: 274 PEALELVKAEPG------------------LMRNALDEVLRFENILRIGTVRFARQDLEY 315
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G +I KG +F+ + R+ V+ P F D R + L +G G
Sbjct: 316 CGASIKKGEMVFLLIPSALRDGTVFSRPDVF------------DVRRDTSASLAYGRGPH 363
Query: 199 ICLAIPLA 206
+C + LA
Sbjct: 364 VCPGVSLA 371
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 10 LLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVE 69
LL P + + + K + +L L L++ G S M Q +AL + L +
Sbjct: 218 LLSPARLARRAHRSKWLESYL---LHLEEMG-VSEEM-QARALVLQL-WATQGNMGPAAF 271
Query: 70 WAMSELLQKPEVMRKACNELGQV-------VALDSVVEEFHLAKLPFLEANVKETLRLHP 122
W + LL+ PE + EL + V+ + + + L P L++ + E+LRL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 123 PAPLLTSR------RPSATSNLSGYTIPKGSTIFINAW-AIQRNPEVWENPQDFQPDRFL 175
AP +T P A + + +G + + + + QR+PE++ +P+ F+ +RFL
Sbjct: 331 AAPFITREVVVDLAMPMADGR--EFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFL 388
Query: 176 -------KDVKIGDFRGNNFNYLPFGSGRRICLAIPLA-EKIVPYVLANLLHL 220
KD R N+N +P+G+G CL A I +V L+HL
Sbjct: 389 NPDGSEKKDFYKDGKRLKNYN-MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHL 440
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 77 QKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPS--- 133
Q E +R A G D V + ++P ++ V E+LR+ PP P + S
Sbjct: 302 QLAEEIRGAIKSYG-----DGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFT 356
Query: 134 ATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKD 177
S+ + + + KG +F ++P+V++ P+++ PDRF+ D
Sbjct: 357 IESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD 400
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 68/188 (36%), Gaps = 31/188 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
+R D L LL+ + G LS ++ AL ++ TDTT + +A+ LL+
Sbjct: 215 ERRRNPLENDVLTMLLQAEADGS-RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRS 273
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
PE + E G + + E LR + T R
Sbjct: 274 PEALELVKAEPG------------------LMRNALDEVLRFDNILRIGTVRFARQDLEY 315
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G +I KG +F+ + R+ V+ P F D R + L +G G
Sbjct: 316 CGASIKKGEMVFLLIPSALRDGTVFSRPDVF------------DVRRDTSASLAYGRGPH 363
Query: 199 ICLAIPLA 206
+C + LA
Sbjct: 364 VCPGVSLA 371
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 10 LLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVE 69
LL P + + + K + +L L L++ G S M Q +AL + L +
Sbjct: 230 LLSPARLARRAHRSKWLESYL---LHLEEMG-VSEEM-QARALVLQL-WATQGNMGPAAF 283
Query: 70 WAMSELLQKPEVMRKACNELGQV-------VALDSVVEEFHLAKLPFLEANVKETLRLHP 122
W + LL+ PE + EL + V+ + + + L P L++ + E+LRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 123 PAPLLTSR------RPSATSNLSGYTIPKGSTIFINAW-AIQRNPEVWENPQDFQPDRFL 175
AP +T P A + + +G + + + + QR+PE++ +P+ F+ +RFL
Sbjct: 343 AAPFITREVVVDLAMPMADGR--EFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFL 400
Query: 176 -------KDVKIGDFRGNNFNYLPFGSGRRICLAIPLA-EKIVPYVLANLLHL 220
KD R N+N +P+G+G CL A I +V L+HL
Sbjct: 401 NPDGSEKKDFYKDGKRLKNYN-MPWGAGHNHCLGRSYAVNSIKQFVFLVLVHL 452
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
V+E LR P + T+R S ++ G TI +G +++ A R+P ++ NP F
Sbjct: 271 VEECLRYESPTQM-TARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF---- 325
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHL--------FEW 223
D + +L FG G +CL LA + LL FEW
Sbjct: 326 --------DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEW 375
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 34/199 (17%)
Query: 20 RNEGKSSKDFLQTLLELQ-QQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
R + + L L+ Q ++GD L D++ + + L++ +TT + L+Q
Sbjct: 205 RKQAEPEDGLLDELIARQLEEGD--LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQH 262
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL 138
PE + + G A+ VVEE L F +V + + R +
Sbjct: 263 PEQIDVLLRDPG---AVSGVVEEL----LRF--TSVSDHI----------VRMAKEDIEV 303
Query: 139 SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRR 198
G TI G + ++ + R+ + +ENP F D R N +++ FG G
Sbjct: 304 GGATIKAGDAVLVSITLMNRDAKAYENPDIF------------DARRNARHHVGFGHGIH 351
Query: 199 ICLAIPLAEKIVPYVLANL 217
CL LA + L L
Sbjct: 352 QCLGQNLARAELEIALGGL 370
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 114 VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDR 173
V+E LR PP + T R + I +G + + + R+ EV+++P F PDR
Sbjct: 244 VEEALRFSPPV-MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
Query: 174 FLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
+L FGSG +CL PLA
Sbjct: 303 ------------TPNPHLSFGSGIHLCLGAPLA 323
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 70 WAMSELLQKPEVMRKACNEL--GQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPL- 126
W M LL PE +R E+ G+ + L E P ++ + ETLRL A +
Sbjct: 275 WVMGYLLTHPEALRAVREEIQGGKHLRL-----EERQKNTPVFDSVLWETLRLTAAALIT 329
Query: 127 --LTSRRPSATSNLSGYTIPKGSTIFINAW-AIQRNPEVWENPQDFQPDRFLKDVKI--G 181
+T + SN Y + +G + + + + Q +P++ + P+ FQ DRFL +
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 182 DFRGN----NFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSL 225
DF N + +P+G+ +C A + ++ +L F+ L
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 32/180 (17%)
Query: 28 DFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACN 87
D + L + G+Y + I A ++ + DTTS + A+ L + PE + A +
Sbjct: 237 DVMSLLANSKLDGNY-IDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKS 295
Query: 88 ELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
+ + L V E +R P R A + + G I +G
Sbjct: 296 DPALIPRL------------------VDEAVRWTAPVKSFM-RTALADTEVRGQNIKRGD 336
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAE 207
I ++ + R+ EV+ NP +F RF +L FG G +CL LA+
Sbjct: 337 RIMLSYPSANRDEEVFSNPDEFDITRFPN------------RHLGFGWGAHMCLGQHLAK 384
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 75/191 (39%), Gaps = 40/191 (20%)
Query: 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKA 85
D + TL+ D L++D + +++IG +TT + A+ L P ++
Sbjct: 226 GDDLVSTLVT-----DDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTAL 280
Query: 86 CNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPK 145
+ V D+VVEE LR PA + R +A ++G +P
Sbjct: 281 RDGSADV---DTVVEEV---------------LRWTSPA-MHVLRVTTADVTINGRDLPS 321
Query: 146 GSTIFINAW--AIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAI 203
G+ + AW A R+P +++P F P R ++ FG G CL
Sbjct: 322 GTPVV--AWLPAANRDPAEFDDPDTFLPGR------------KPNRHITFGHGMHHCLGS 367
Query: 204 PLAEKIVPYVL 214
LA + VL
Sbjct: 368 ALARIELSVVL 378
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 90 GQVVALDSVVEEFHLAKL----PFLEANVKETLRLHPPAPLLTSRRPS-ATSNLSGYTIP 144
G V+AL ++F AKL +E V E +R PL RR + A S L G TI
Sbjct: 276 GGVLALHKNPDQF--AKLKANPALVETMVPEIIRWQ--TPLAHMRRTAIADSELGGKTIR 331
Query: 145 KGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIP 204
KG + + ++ R+ EV + P++F D R +L FG G C+
Sbjct: 332 KGDKVVMWYYSGNRDDEVIDRPEEFIID-----------RPRPRQHLSFGFGIHRCVGNR 380
Query: 205 LAE 207
LAE
Sbjct: 381 LAE 383
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 53/235 (22%)
Query: 10 LLRPGQSGQDRNEGKSSKDFLQTLLE--LQQQGDYSLS-------------MDQIKALFM 54
L RP S +++ D+L +E + Q GD S +D+ + +
Sbjct: 170 LTRPDGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPWTVDEARRMCR 229
Query: 55 DLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANV 114
+L+ G DT + + L + PE R ++ E + + A
Sbjct: 230 NLLFGGLDTVAAMIGMVALHLARHPEDQR--------------LLRE----RPDLIPAAA 271
Query: 115 KETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 174
E +R +P + SR A + G TI KG +++ + +P +E P++ + DR
Sbjct: 272 DELMRRYPT--VAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRG 329
Query: 175 LKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEW--SLPE 227
L ++ + G G C+ LA V ++ L EW +PE
Sbjct: 330 LAPIR----------HTTMGVGAHRCVGAGLARMEV------IVFLREWLGGMPE 368
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
DR + + D + L++ + Q D SLS ++ L + L++ ++T+ + + L+ +
Sbjct: 215 DRRRKEPTDDLVSALVQARDQQD-SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTR 273
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATS-N 137
PE+ R+ + + + + V+E R P + R +
Sbjct: 274 PELRRQLLD------------------RPELIPSAVEELTRWVPLGVGTAAPRYAVEDVT 315
Query: 138 LSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
L G TI G + + A R+ + + DR +L FG G
Sbjct: 316 LRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR------------TPNQHLGFGHGV 363
Query: 198 RICLAIPLAEKIVPYVLANLLH 219
CL PLA + L LL
Sbjct: 364 HHCLGAPLARVELQVALEVLLQ 385
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 34/203 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
DR + + D + L++ + Q D SLS ++ L + L++ ++T+ + + L+ +
Sbjct: 215 DRRRKEPTDDLVSALVQARDQQD-SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTR 273
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTS--RRPSATS 136
PE+ R+ + P L + E L P + T+ R
Sbjct: 274 PELRRQLLDR-------------------PELIPSAVEELTRWVPLGVGTAFPRYAVEDV 314
Query: 137 NLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSG 196
L G TI G + + A R+ + + DR +L FG G
Sbjct: 315 TLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR------------TPNQHLGFGHG 362
Query: 197 RRICLAIPLAEKIVPYVLANLLH 219
CL PLA + L LL
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQ 385
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 34/203 (16%)
Query: 19 DRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQK 78
DR + + D + L++ + Q D SLS ++ L + L++ ++T+ + + L+ +
Sbjct: 215 DRRRKEPTDDLVSALVQARDQQD-SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTR 273
Query: 79 PEVMRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTS--RRPSATS 136
PE+ R+ + P L + E L P + T+ R
Sbjct: 274 PELRRQLLDR-------------------PELIPSAVEELTRWVPLGVGTAVPRYAVEDV 314
Query: 137 NLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSG 196
L G TI G + + A R+ + + DR +L FG G
Sbjct: 315 TLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR------------TPNQHLGFGHG 362
Query: 197 RRICLAIPLAEKIVPYVLANLLH 219
CL PLA + L LL
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQ 385
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
L V+E +R P R + + L G I G + +N A +P + P+
Sbjct: 321 LLPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
F P R +L FG+G CL + LA
Sbjct: 380 FDPTRPAN------------RHLAFGAGSHQCLGLHLA 405
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 138 LSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGR 197
L+G TI +G + + + R+P W++ PDR+ D ++ FGSG
Sbjct: 311 LAGATIGEGEKVLMFLGSANRDPRRWDD-----PDRY-------DITRKTSGHVGFGSGV 358
Query: 198 RICLAIPLAEKIVPYVLANL 217
+C+ +A VLA L
Sbjct: 359 HMCVGQLVARLEGEVVLAAL 378
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 29/173 (16%)
Query: 28 DFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACN 87
D L++ + GD+ + + L + + G T S+ V A+ L PE ++A
Sbjct: 212 DLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVN-AVVNLSTHPE--QRALV 268
Query: 88 ELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
G+ E+ A V+ETLR P + R + + IP G
Sbjct: 269 LSGEA--------EW--------SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGD 312
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRIC 200
+ ++ A+ R+ E DRF D+ R + ++ FG G +C
Sbjct: 313 ALIVSYGALGRD----ERAHGPTADRF--DLT----RTSGNRHISFGHGPHVC 355
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ A V E LR+ A + R + LSG T+P + +PE +++P+
Sbjct: 281 LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPER 340
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLL 218
DF + +++ FG G C+ LA + L LL
Sbjct: 341 V------------DFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 113 NVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPD 172
V E LRLHP A L R +A L + I +G + + A R+PEV+ P D
Sbjct: 258 TVAEVLRLHP-ALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVD 316
Query: 173 RFLKDVKIGDFRGN 186
R D + RG+
Sbjct: 317 RPDADRALSAHRGH 330
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 39/186 (20%)
Query: 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPE---V 81
+D L +L+ +G +S ++I + + + +T + V A+ LL P+ +
Sbjct: 201 GGEDLLALMLDAHDRG--LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDL 258
Query: 82 MRKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGY 141
+R+ + L Q V +E LR + P+ +R+ L G
Sbjct: 259 LRRRPDLLAQAV---------------------EECLR-YDPSVQSNTRQLDVDVELRGR 296
Query: 142 TIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICL 201
+ + + + A A R+P ++ P DF +R + + FG+G R CL
Sbjct: 297 RLRRDDVVVVLAGAANRDPRRYDRPDDFDIER------------DPVPSMSFGAGMRYCL 344
Query: 202 AIPLAE 207
LA
Sbjct: 345 GSYLAR 350
>pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 52 LFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLAKLPFLE 111
L+ DL+ D + +A + L +PEV+ K + +G A+ P ++
Sbjct: 248 LWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGA--------RPLMD 299
Query: 112 ANVKETLRLHPPAPLLTSRRPSAT 135
+V ++ ++PP +L SA
Sbjct: 300 KSVSDSEEVYPPQAVLDKLYVSAV 323
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPS---ATSNLSGYTIPKGSTIFINAWAIQRNP 160
+ K+ ++ V E LR PP R S+ + + + G ++ R+P
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400
Query: 161 EVWENPQDFQPDRFLKD 177
++++ +F P+RF+ +
Sbjct: 401 KIFDRADEFVPERFVGE 417
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPS---ATSNLSGYTIPKGSTIFINAWAIQRNP 160
+ K+ ++ V E LR PP R S+ + + + G ++ R+P
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400
Query: 161 EVWENPQDFQPDRFLKD 177
++++ +F P+RF+ +
Sbjct: 401 KIFDRADEFVPERFVGE 417
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 13/119 (10%)
Query: 89 LGQVVALDSVVEEFHLAKLPFLEAN-VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
LG + LDS + L + P L N V+E LR R + L G I KG
Sbjct: 248 LGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
+ + A +P E P+ F D +L FG G C+ LA
Sbjct: 308 QVVAHVLAADFDPAFVEEPERF------------DITRRPAPHLAFGFGAHQCIGQQLA 354
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 13/119 (10%)
Query: 89 LGQVVALDSVVEEFHLAKLPFLEAN-VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
LG + LDS + L + P L N V+E LR R + L G I KG
Sbjct: 248 LGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
+ + A +P E P+ F D +L FG G C+ LA
Sbjct: 308 QVVAHVLAADFDPAFVEEPERF------------DITRRPAPHLAFGFGAHQCIGQQLA 354
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 13/119 (10%)
Query: 89 LGQVVALDSVVEEFHLAKLPFLEAN-VKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGS 147
LG + LDS + L + P L N V+E LR R + L G I KG
Sbjct: 248 LGTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 148 TIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLA 206
+ + A +P E P+ F D +L FG G C+ LA
Sbjct: 308 QVVAHVLAADFDPAFVEEPERF------------DITRRPAPHLAFGFGAHQCIGQQLA 354
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQD 168
+ A V+E LR++ R +A + + KG + + +PE + NP
Sbjct: 265 LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 324
Query: 169 FQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEK 208
+ DR N ++L FG G+ CL L +
Sbjct: 325 IELDR-----------PNPTSHLAFGRGQHFCLGSALGRR 353
>pdb|3PSI|A Chain A, Crystal Structure Of The Spt6 Core Domain From
Saccharomyces Cerevisiae, Form Spt6(239-1451)
Length = 1219
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 33/163 (20%)
Query: 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKA 85
S + L L + Q Y I+ LF + + +T+T+ I +EW L + M K
Sbjct: 417 SLNLLSVKLHMSSQAQY------IEHLFQ-IALETTNTSDIAIEWNNFRKLAFNQAMDKI 469
Query: 86 CNELGQVV-----------ALDSVVEEF--HLAKLPFLEANVKETLRLHPPAPLLTS--- 129
++ Q V +V +F L + PF+ NV++ P P + S
Sbjct: 470 FQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFI-PNVRD-----PKIPKILSLTC 523
Query: 130 --RRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQ 170
R A + ++ Y KG FI + I NP NP+ F+
Sbjct: 524 GQGRFGADAIIAVYVNRKGD--FIRDYKIVDNPFDKTNPEKFE 564
>pdb|3PSF|A Chain A, Crystal Structure Of The Spt6 Core Domain From
Saccharomyces Cerevisiae, Form Spt6(236-1259)
Length = 1030
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 33/163 (20%)
Query: 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKA 85
S + L L + Q Y I+ LF + + +T+T+ I +EW L + M K
Sbjct: 420 SLNLLSVKLHMSSQAQY------IEHLFQ-IALETTNTSDIAIEWNNFRKLAFNQAMDKI 472
Query: 86 CNELGQVV-----------ALDSVVEEF--HLAKLPFLEANVKETLRLHPPAPLLTS--- 129
++ Q V +V +F L + PF+ NV++ P P + S
Sbjct: 473 FQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFI-PNVRD-----PKIPKILSLTC 526
Query: 130 --RRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQ 170
R A + ++ Y KG FI + I NP NP+ F+
Sbjct: 527 GQGRFGADAIIAVYVNRKGD--FIRDYKIVDNPFDKTNPEKFE 567
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 33/185 (17%)
Query: 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKA 85
++D + L+E G+ LS D+ + L + +TT ++ M Q P+
Sbjct: 219 TEDIVTKLIEADIDGE-KLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPD----- 272
Query: 86 CNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPK 145
++ L K E E +R P R L G I K
Sbjct: 273 ---------------QWELYKKERPETAADEIVRWATPVSAF-QRTALEDVELGGVQIKK 316
Query: 146 GSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPL 205
G + ++ + + EV+E+P F R N + G+G C+ L
Sbjct: 317 GQRVVMSYRSANFDEEVFEDPHTFNI-----------LRSPNPHVGFGGTGAHYCIGANL 365
Query: 206 AEKIV 210
A +
Sbjct: 366 ARMTI 370
>pdb|2P3H|A Chain A, Crystal Structure Of The Corc_hlyc Domain Of A Putative
Corynebacterium Glutamicum Hemolysin
Length = 101
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 140 GYTIPKGS------TIFINAWAIQRNPEVWENPQDFQPDRFLKD 177
GY +P+G +F +A A+ + +V E P DF+P+ +L +
Sbjct: 30 GYELPEGDYETISGLLFDHANALLKTGDVIEIPLDFEPEDYLNN 73
>pdb|2X7B|A Chain A, Crystal Structure Of The N-Terminal Acetylase Ard1 From
Sulfolobus Solfataricus P2
Length = 168
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 34 LELQQQGDYSLSMDQIKALFMDLVIGSTDTTSI-----TVEWAMSELLQKPEVMRKACNE 88
L L + Y ++ +K + + D + + +EW S + Q P ++RK
Sbjct: 32 LTLPENYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRK---- 87
Query: 89 LGQVVALDSVVEEFHLAKLP--FLEANVK 115
G VV++ +V+EE+ + LEA++K
Sbjct: 88 -GHVVSI-AVLEEYRRKGIATTLLEASMK 114
>pdb|3FFZ|A Chain A, Domain Organization In Clostridium Butulinum Neurotoxin
Type E Is Unique: Its Implication In Faster
Translocation
pdb|3FFZ|B Chain B, Domain Organization In Clostridium Butulinum Neurotoxin
Type E Is Unique: Its Implication In Faster
Translocation
Length = 1252
Score = 26.9 bits (58), Expect = 9.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 145 KGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRGNNFNYL 191
K I N W I + PQDF P LK+ GD + NYL
Sbjct: 31 KSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKN---GDSSYYDPNYL 74
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,144,638
Number of Sequences: 62578
Number of extensions: 292417
Number of successful extensions: 1111
Number of sequences better than 100.0: 176
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 802
Number of HSP's gapped (non-prelim): 177
length of query: 233
length of database: 14,973,337
effective HSP length: 96
effective length of query: 137
effective length of database: 8,965,849
effective search space: 1228321313
effective search space used: 1228321313
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)