Query 036874
Match_columns 233
No_of_seqs 135 out of 1135
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 06:18:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036874.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036874hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.4E-53 3.1E-58 362.1 19.4 200 24-227 264-470 (499)
2 KOG0156 Cytochrome P450 CYP2 s 100.0 5.6E-53 1.2E-57 362.0 21.0 219 4-228 244-463 (489)
3 PLN02971 tryptophan N-hydroxyl 100.0 3.8E-52 8.2E-57 365.7 20.9 204 26-229 304-508 (543)
4 PLN03234 cytochrome P450 83B1; 100.0 2.6E-50 5.7E-55 351.4 22.3 205 25-229 263-470 (499)
5 PLN02394 trans-cinnamate 4-mon 100.0 1.7E-50 3.7E-55 352.8 21.1 203 25-229 272-474 (503)
6 PF00067 p450: Cytochrome P450 100.0 1.8E-50 3.8E-55 346.5 17.7 205 24-230 236-442 (463)
7 PLN02500 cytochrome P450 90B1 100.0 4.6E-50 9.9E-55 349.1 19.8 198 26-229 262-468 (490)
8 PLN02183 ferulate 5-hydroxylas 100.0 9.2E-50 2E-54 349.0 21.8 202 26-229 271-483 (516)
9 PTZ00404 cytochrome P450; Prov 100.0 6.9E-50 1.5E-54 347.4 20.5 197 25-229 261-458 (482)
10 KOG0157 Cytochrome P450 CYP4/C 100.0 1.1E-49 2.5E-54 345.7 19.2 220 3-229 250-472 (497)
11 PLN00168 Cytochrome P450; Prov 100.0 6.2E-49 1.3E-53 344.0 22.9 204 26-229 282-491 (519)
12 PLN03112 cytochrome P450 famil 100.0 5.3E-49 1.2E-53 344.2 21.5 205 25-229 272-479 (514)
13 PLN03195 fatty acid omega-hydr 100.0 3.1E-49 6.7E-54 345.8 19.8 202 25-229 269-492 (516)
14 PLN02966 cytochrome P450 83A1 100.0 6.9E-49 1.5E-53 342.5 21.6 202 26-229 265-471 (502)
15 PLN02169 fatty acid (omega-1)- 100.0 5.6E-49 1.2E-53 342.4 20.4 196 26-229 276-476 (500)
16 PLN02774 brassinosteroid-6-oxi 100.0 7.8E-49 1.7E-53 339.1 20.9 199 25-230 242-443 (463)
17 PLN02687 flavonoid 3'-monooxyg 100.0 9.1E-49 2E-53 342.8 21.5 205 25-229 269-480 (517)
18 PLN00110 flavonoid 3',5'-hydro 100.0 1.4E-48 3.1E-53 340.3 21.2 204 26-229 266-471 (504)
19 PLN02290 cytokinin trans-hydro 100.0 8.6E-49 1.9E-53 343.1 19.0 198 25-229 290-491 (516)
20 PLN03018 homomethionine N-hydr 100.0 2.5E-48 5.4E-53 340.2 21.5 203 26-228 291-497 (534)
21 PLN02738 carotene beta-ring hy 100.0 4.4E-48 9.5E-53 343.1 21.8 198 26-229 373-570 (633)
22 PLN02655 ent-kaurene oxidase 100.0 6.6E-48 1.4E-52 333.5 21.7 196 26-229 244-439 (466)
23 KOG0159 Cytochrome P450 CYP11/ 100.0 6.4E-48 1.4E-52 322.4 17.9 197 25-230 298-495 (519)
24 PLN03141 3-epi-6-deoxocathaste 100.0 1.9E-47 4.1E-52 329.6 19.4 194 26-229 232-429 (452)
25 PLN02936 epsilon-ring hydroxyl 100.0 3.1E-47 6.8E-52 331.0 20.8 200 26-230 260-459 (489)
26 PLN02302 ent-kaurenoic acid ox 100.0 4.4E-47 9.6E-52 330.4 20.7 197 25-228 264-464 (490)
27 PLN02426 cytochrome P450, fami 100.0 4E-47 8.6E-52 330.7 19.5 194 26-228 277-473 (502)
28 PLN02196 abscisic acid 8'-hydr 100.0 2.5E-46 5.5E-51 323.3 20.5 192 26-229 246-440 (463)
29 PLN02987 Cytochrome P450, fami 100.0 6.5E-46 1.4E-50 320.9 21.1 198 25-230 248-448 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 3.2E-46 6.8E-51 306.0 17.5 206 23-230 249-461 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 2.2E-42 4.8E-47 294.0 17.5 177 23-228 211-387 (411)
32 PLN02648 allene oxide synthase 100.0 2.4E-39 5.2E-44 279.2 20.0 190 32-229 257-463 (480)
33 PF08492 SRP72: SRP72 RNA-bind 56.5 8.6 0.00019 23.3 1.6 8 170-177 44-51 (59)
34 PF05952 ComX: Bacillus compet 51.0 17 0.00038 21.8 2.3 23 70-92 4-26 (57)
35 PF09201 SRX: SRX; InterPro: 47.5 17 0.00037 26.1 2.2 23 198-220 18-40 (148)
36 PF12444 Sox_N: Sox developmen 45.1 14 0.0003 24.1 1.4 23 208-230 60-82 (84)
37 COG1759 5-formaminoimidazole-4 42.8 48 0.001 27.6 4.3 69 111-214 276-351 (361)
38 KOG3506 40S ribosomal protein 40.2 13 0.00029 21.9 0.6 11 191-201 12-22 (56)
39 PF12554 MOZART1: Mitotic-spin 38.0 82 0.0018 18.2 4.8 43 47-89 5-47 (48)
40 PF08285 DPM3: Dolichol-phosph 35.5 58 0.0013 21.6 3.2 29 65-93 53-81 (91)
41 PF12508 DUF3714: Protein of u 33.9 33 0.00071 26.5 2.0 43 107-151 52-94 (200)
42 PF11227 DUF3025: Protein of u 33.7 22 0.00048 27.6 1.1 19 155-173 193-211 (212)
43 PF14550 Peptidase_U35_2: Puta 26.9 45 0.00099 23.5 1.7 20 132-151 73-92 (122)
44 COG2101 SPT15 TATA-box binding 25.1 22 0.00047 26.7 -0.2 36 167-204 35-70 (185)
45 COG0851 MinE Septum formation 23.7 1.5E+02 0.0032 19.5 3.4 43 53-95 3-52 (88)
46 PF14129 DUF4296: Domain of un 22.2 2.3E+02 0.005 18.3 7.5 50 44-93 29-78 (87)
No 1
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-53 Score=362.10 Aligned_cols=200 Identities=32% Similarity=0.573 Sum_probs=185.3
Q ss_pred CCcchHHHHHHHHhhc-----C-CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCC
Q 036874 24 KSSKDFLQTLLELQQQ-----G-DYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDS 97 (233)
Q Consensus 24 ~~~~d~l~~ll~~~~~-----~-~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~ 97 (233)
..+.|+++.|++...+ . ...++.++|+++++.|++||.|||+++++.++|+|+.||++|+||++||++++....
T Consensus 264 ~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~ 343 (499)
T KOG0158|consen 264 IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKE 343 (499)
T ss_pred CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccC
Confidence 5678999999998742 1 115999999999999999999999999999999999999999999999999977655
Q ss_pred cccccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCccc-CeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCC
Q 036874 98 VVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS-GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLK 176 (233)
Q Consensus 98 ~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~ 176 (233)
.++++.+.+|+||++||+||||+||+.+. +.|.+++|.+++ ++.|++|+.|.++.+++||||++||||++|+||||.+
T Consensus 344 ~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~ 422 (499)
T KOG0158|consen 344 GLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEE 422 (499)
T ss_pred CCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCC
Confidence 59999999999999999999999999999 789999999999 9999999999999999999999999999999999998
Q ss_pred CccCCCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCC
Q 036874 177 DVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPE 227 (233)
Q Consensus 177 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~ 227 (233)
...+ ...+..|+|||.|||+|+|++||++|+|+.|+.+|++|+|+..+
T Consensus 423 ~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~ 470 (499)
T KOG0158|consen 423 ENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP 470 (499)
T ss_pred Cccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC
Confidence 7533 34677999999999999999999999999999999999999876
No 2
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.6e-53 Score=361.97 Aligned_cols=219 Identities=45% Similarity=0.850 Sum_probs=195.6
Q ss_pred HHHHHHhhhccccCCCCCCCCCcchHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHH
Q 036874 4 AKIFESLLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYS-LSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82 (233)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~ 82 (233)
.++++.+++++++.. .. ...+|+++.||+..++++.. +++++|...+.++++||.|||++++.|++.+|.+||++|
T Consensus 244 ~~~~~~~i~eh~~~~-~~--~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~ 320 (489)
T KOG0156|consen 244 DEFLERIIDEHREKI-GD--EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQ 320 (489)
T ss_pred HHHHHHHHHHHHhhh-cc--CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHH
Confidence 345555555554433 11 22289999999986642222 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCcccccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCC
Q 036874 83 RKACNELGQVVALDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEV 162 (233)
Q Consensus 83 ~~l~~Ei~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~ 162 (233)
+|+++|++++++.+..++..++.++||++|+|+|++|++|+.|..++|.+.+|+.++||.||+||.|+++.|++|+||++
T Consensus 321 ~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~v 400 (489)
T KOG0156|consen 321 KKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKV 400 (489)
T ss_pred HHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCcc
Confidence 99999999999988779999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCCCccCCCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCC
Q 036874 163 WENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228 (233)
Q Consensus 163 ~~~p~~F~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g 228 (233)
|+||++|+||||++.+ +.......++|||.|.|+|||..+|++++.++++.++++|+|++++|
T Consensus 401 w~dP~eF~PERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~ 463 (489)
T KOG0156|consen 401 WEDPEEFKPERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG 463 (489)
T ss_pred CCCccccChhhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence 9999999999999974 22336788999999999999999999999999999999999999987
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=3.8e-52 Score=365.72 Aligned_cols=204 Identities=33% Similarity=0.673 Sum_probs=184.1
Q ss_pred cchHHHHHHHHhhcCC-CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccccc
Q 036874 26 SKDFLQTLLELQQQGD-YSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHL 104 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 104 (233)
..|+++.|++...+.+ ..+++++|.+++.++++||+|||+.+++|++++|+.||++|+++++|++++++.+..++.+++
T Consensus 304 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~ 383 (543)
T PLN02971 304 IEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDI 383 (543)
T ss_pred CcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHh
Confidence 4699999998654322 248999999999999999999999999999999999999999999999999987778899999
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCC
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFR 184 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~ 184 (233)
.++||+++||+|++|++|+++...+|.+.+|+.++||.||||+.|+++.|++||||++|+||++|+||||++........
T Consensus 384 ~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~ 463 (543)
T PLN02971 384 PKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLT 463 (543)
T ss_pred ccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCcccccc
Confidence 99999999999999999999987789999999999999999999999999999999999999999999999753221112
Q ss_pred CCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 185 GNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 185 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
..+..|+|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 464 ~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 508 (543)
T PLN02971 464 ENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE 508 (543)
T ss_pred CCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC
Confidence 245689999999999999999999999999999999999988754
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=2.6e-50 Score=351.37 Aligned_cols=205 Identities=40% Similarity=0.789 Sum_probs=184.4
Q ss_pred CcchHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccc
Q 036874 25 SSKDFLQTLLELQQQG--DYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEF 102 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 102 (233)
...|+++.|++..+++ +..+++++|.+++.++++||+|||+.+++|++++|++||++|+++++|+++++++...++.+
T Consensus 263 ~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~ 342 (499)
T PLN03234 263 ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEE 342 (499)
T ss_pred CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence 3578999998765432 23589999999999999999999999999999999999999999999999998876678899
Q ss_pred ccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCC-CCCCCCCCCccCCCccCC
Q 036874 103 HLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIG 181 (233)
Q Consensus 103 ~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~ 181 (233)
++.++||+++||+|++|++|+++...+|.+.+|+.++|+.||+||.|.++.+++||||++| +||++|+||||+++....
T Consensus 343 ~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~ 422 (499)
T PLN03234 343 DIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGV 422 (499)
T ss_pred HHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCc
Confidence 9999999999999999999999986679999999999999999999999999999999999 899999999999754322
Q ss_pred CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 182 DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 182 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
........++|||.|+|+|+|+++|++|+++++|.++++|+|++++|.
T Consensus 423 ~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 470 (499)
T PLN03234 423 DFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGI 470 (499)
T ss_pred CcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCC
Confidence 223346689999999999999999999999999999999999999874
No 5
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=1.7e-50 Score=352.84 Aligned_cols=203 Identities=38% Similarity=0.678 Sum_probs=183.3
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHL 104 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 104 (233)
...|+++.|++...+ +.++++++..++..+++||+|||+.+++|++++|++||++|+++++|++++++.+..++.+++
T Consensus 272 ~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l 349 (503)
T PLN02394 272 GLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDT 349 (503)
T ss_pred hhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHH
Confidence 357999999986543 348999999999999999999999999999999999999999999999999876667788899
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCC
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFR 184 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~ 184 (233)
.++||+++||+|++|++|+++...+|.+.+|+.++|+.||+||.|.++.|++||||++|+||++|+||||++.++.....
T Consensus 350 ~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~ 429 (503)
T PLN02394 350 HKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEAN 429 (503)
T ss_pred hhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCccccc
Confidence 99999999999999999999987789999999999999999999999999999999999999999999999753221112
Q ss_pred CCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 185 GNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 185 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
.....++|||.|+|+|+|++||++|+++++|.++++|+|++.+|.
T Consensus 430 ~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~ 474 (503)
T PLN02394 430 GNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ 474 (503)
T ss_pred CCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC
Confidence 245689999999999999999999999999999999999988876
No 6
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.8e-50 Score=346.50 Aligned_cols=205 Identities=36% Similarity=0.640 Sum_probs=184.7
Q ss_pred CCcchHHHHHHHHh-hcCC-CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccc
Q 036874 24 KSSKDFLQTLLELQ-QQGD-YSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEE 101 (233)
Q Consensus 24 ~~~~d~l~~ll~~~-~~~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~ 101 (233)
....|+++.++... ..++ ..++++++..+++.+++||++||+.+++|++++|++||++|+++++|++.+.+.+..++.
T Consensus 236 ~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~ 315 (463)
T PF00067_consen 236 ESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITF 315 (463)
T ss_dssp SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45789999999986 3233 479999999999999999999999999999999999999999999999999976678899
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG 181 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~ 181 (233)
+++.++||+++||+|++|++|+++..++|.+.+|++++|+.||+|+.|+++.+++|+||++|+||++|+|+||++...
T Consensus 316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~-- 393 (463)
T PF00067_consen 316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG-- 393 (463)
T ss_dssp HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 999999999999999999999999668899999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 182 DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 182 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
........++|||.|+|.|||++||++|++++++.++++|+|+++++..
T Consensus 394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~ 442 (463)
T PF00067_consen 394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE 442 (463)
T ss_dssp TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS
T ss_pred ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC
Confidence 1123667899999999999999999999999999999999999976543
No 7
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=4.6e-50 Score=349.05 Aligned_cols=198 Identities=25% Similarity=0.419 Sum_probs=177.7
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhc-----CCCccc
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVA-----LDSVVE 100 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~ 100 (233)
..|+++.+++. ..++++++++++.++++||+|||+.+++|++++|+.||++|+++++|++++.+ .+..++
T Consensus 262 ~~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~ 336 (490)
T PLN02500 262 EDDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELN 336 (490)
T ss_pred cchHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence 46999999973 23899999999999999999999999999999999999999999999998863 234578
Q ss_pred ccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccC
Q 036874 101 EFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI 180 (233)
Q Consensus 101 ~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~ 180 (233)
.+++.++||+++||+|++|++|+++. ..|.+.+|+.++||.||||+.|.++.|++||||++|+||++|+||||++.++.
T Consensus 337 ~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~ 415 (490)
T PLN02500 337 WEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNR 415 (490)
T ss_pred HHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcc
Confidence 89999999999999999999999998 57999999999999999999999999999999999999999999999975322
Q ss_pred CCC----CCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 181 GDF----RGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 181 ~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
.+. ...+..++|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 416 ~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~ 468 (490)
T PLN02500 416 GGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD 468 (490)
T ss_pred cccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC
Confidence 111 1245689999999999999999999999999999999999987764
No 8
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=9.2e-50 Score=349.00 Aligned_cols=202 Identities=44% Similarity=0.848 Sum_probs=181.7
Q ss_pred cchHHHHHHHHhhc-----------CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhc
Q 036874 26 SKDFLQTLLELQQQ-----------GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVA 94 (233)
Q Consensus 26 ~~d~l~~ll~~~~~-----------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~ 94 (233)
..|+++.|++...+ ....++++++.++++++++||+|||+.+++|++++|+.||++|+++++|++++++
T Consensus 271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~ 350 (516)
T PLN02183 271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG 350 (516)
T ss_pred cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence 46899999985432 1235899999999999999999999999999999999999999999999999987
Q ss_pred CCCcccccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCcc
Q 036874 95 LDSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRF 174 (233)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~ 174 (233)
.+..++.++++++||+++||+|++|++|+++.. .|.+.+|+.++|+.|||||.|.++.+++||||++|+||++|+||||
T Consensus 351 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRf 429 (516)
T PLN02183 351 LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRF 429 (516)
T ss_pred CCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhh
Confidence 666788999999999999999999999999985 5889999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 175 LKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
++++.. +.....+.|+|||.|+|+|+|++||++|+++++|.++++|+|++++|.
T Consensus 430 l~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~ 483 (516)
T PLN02183 430 LKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGM 483 (516)
T ss_pred CCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCC
Confidence 975321 112345689999999999999999999999999999999999998874
No 9
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=6.9e-50 Score=347.36 Aligned_cols=197 Identities=29% Similarity=0.468 Sum_probs=177.6
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHL 104 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 104 (233)
...|+++.|++...+ ......++|++++.++++||+|||+.+++|++++|++||++|+++++|++++++....++.+++
T Consensus 261 ~~~dll~~ll~~~~~-~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l 339 (482)
T PTZ00404 261 VPRDLLDLLIKEYGT-NTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDR 339 (482)
T ss_pred CcccHHHHHHHHhcc-CCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCcccc
Confidence 357999999986432 1112334588999999999999999999999999999999999999999999886667888999
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcc-cCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCC
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL-SGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDF 183 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~ 183 (233)
.+|||+++||+|++|++|+++...+|.+.+|+.+ +|+.||+|+.|.++.+++||||++||||++|+||||++..
T Consensus 340 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~----- 414 (482)
T PTZ00404 340 QSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD----- 414 (482)
T ss_pred ccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----
Confidence 9999999999999999999997668999999999 9999999999999999999999999999999999998642
Q ss_pred CCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 184 RGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 184 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
....++|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 415 --~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 458 (482)
T PTZ00404 415 --SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK 458 (482)
T ss_pred --CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC
Confidence 34689999999999999999999999999999999999998764
No 10
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-49 Score=345.72 Aligned_cols=220 Identities=32% Similarity=0.560 Sum_probs=183.1
Q ss_pred cHHHHHHhhhccccCCCCCCCCCcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHH
Q 036874 3 SAKIFESLLRPGQSGQDRNEGKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVM 82 (233)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~ 82 (233)
++++++++++..++..... .....|+++.+..... ..+++++|.+++.+|++||+|||+.+++|++++|+.||++|
T Consensus 250 ~~~iI~~rr~~~~~~~~~~-~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq 325 (497)
T KOG0157|consen 250 LEKIIRERREELEKEGSGE-EKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQ 325 (497)
T ss_pred HHHHHHHHHHHHHhcCCcc-cchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHH
Confidence 3445555554433222211 2456788887333221 56999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCc-ccccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCccc-CeeeCCCCEEEeehhhhhcCC
Q 036874 83 RKACNELGQVVALDSV-VEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLS-GYTIPKGSTIFINAWAIQRNP 160 (233)
Q Consensus 83 ~~l~~Ei~~~~~~~~~-~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~ 160 (233)
+++++|++++++.... .+....++|+|+++||+|++|++|++|. ..|.+.+|+.++ |+.||+|+.|.++.+++|||+
T Consensus 326 ~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~ 404 (497)
T KOG0157|consen 326 EKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDP 404 (497)
T ss_pred HHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCc
Confidence 9999999999874322 2333333699999999999999999998 679999999995 899999999999999999999
Q ss_pred CCCC-CCCCCCCCccCCCccCCCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 161 EVWE-NPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 161 ~~~~-~p~~F~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
.+|+ ||++|||+||+++.... ...+++|+|||.|+|+|+|++||++|++++++.++++|+|+++.+.
T Consensus 405 ~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~ 472 (497)
T KOG0157|consen 405 RVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD 472 (497)
T ss_pred cccCCChhhcCccccCCCCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC
Confidence 9995 99999999999754332 3356899999999999999999999999999999999999998875
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=6.2e-49 Score=344.00 Aligned_cols=204 Identities=34% Similarity=0.619 Sum_probs=181.9
Q ss_pred cchHHHHHHHHhhc--CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCC-Cccccc
Q 036874 26 SKDFLQTLLELQQQ--GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALD-SVVEEF 102 (233)
Q Consensus 26 ~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~ 102 (233)
..|+++.|++.... ++..+++++|.++++++++||+|||+.+++|++++|+.||++|+++++|++++++.+ ..++.+
T Consensus 282 ~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~ 361 (519)
T PLN00168 282 EHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEE 361 (519)
T ss_pred cccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHH
Confidence 46899999976432 234599999999999999999999999999999999999999999999999998753 567889
Q ss_pred ccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC-
Q 036874 103 HLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG- 181 (233)
Q Consensus 103 ~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~- 181 (233)
++.++||+++||+|++|++|+.+...+|.+.+|+.++|+.||+|+.|.++.+++||||++||||++|+||||++.....
T Consensus 362 ~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~ 441 (519)
T PLN00168 362 DVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEG 441 (519)
T ss_pred HhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCcc
Confidence 9999999999999999999999887789999999999999999999999999999999999999999999999743211
Q ss_pred -C-CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 182 -D-FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 182 -~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
+ .....+.++|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 442 ~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 491 (519)
T PLN00168 442 VDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD 491 (519)
T ss_pred ccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC
Confidence 1 11234579999999999999999999999999999999999987653
No 12
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=5.3e-49 Score=344.24 Aligned_cols=205 Identities=36% Similarity=0.717 Sum_probs=182.9
Q ss_pred CcchHHHHHHHHhhc-CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccccc
Q 036874 25 SSKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFH 103 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 103 (233)
...|+++.|++...+ +...+++++|.++++.+++||+|||+++++|++++|+.||++|+++++|++++++.+..++.++
T Consensus 272 ~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~ 351 (514)
T PLN03112 272 KDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESD 351 (514)
T ss_pred ccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhh
Confidence 346999999986543 2335899999999999999999999999999999999999999999999999988766789999
Q ss_pred cCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC-C
Q 036874 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG-D 182 (233)
Q Consensus 104 ~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~-~ 182 (233)
+.++||+++||+|++|++|+++...+|.+.+|+.++|+.||+|+.|.++.+++||||++|+||++|+|+||....+.. .
T Consensus 352 l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~ 431 (514)
T PLN03112 352 LVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVE 431 (514)
T ss_pred hccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccc
Confidence 999999999999999999999986789999999999999999999999999999999999999999999987542111 1
Q ss_pred -CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 183 -FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 183 -~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
....+..++|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 432 ~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 479 (514)
T PLN03112 432 ISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGL 479 (514)
T ss_pred cccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCC
Confidence 11234679999999999999999999999999999999999998653
No 13
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=3.1e-49 Score=345.83 Aligned_cols=202 Identities=26% Similarity=0.449 Sum_probs=175.2
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcC---------
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVAL--------- 95 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--------- 95 (233)
...|+++.|++...+.+..+++++++++++++++||+|||+.+++|++++|+.||++|+++++|++++++.
T Consensus 269 ~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~ 348 (516)
T PLN03195 269 VKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPED 348 (516)
T ss_pred ccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccc
Confidence 35689999998644334469999999999999999999999999999999999999999999999987642
Q ss_pred -----------CCcccccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCc-ccCeeeCCCCEEEeehhhhhcCCCCC
Q 036874 96 -----------DSVVEEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSN-LSGYTIPKGSTIFINAWAIQRNPEVW 163 (233)
Q Consensus 96 -----------~~~~~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~-~~g~~ip~g~~v~~~~~~~~~d~~~~ 163 (233)
+..++.+++.++||+++||+|++|++|+++.. .|.+..|.. ++|+.||||+.|.++.+++||||++|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~ 427 (516)
T PLN03195 349 SQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNW 427 (516)
T ss_pred cchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhhh
Confidence 23468889999999999999999999999985 455555544 48999999999999999999999999
Q ss_pred -CCCCCCCCCccCCCccCCCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 164 -ENPQDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 164 -~~p~~F~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
+||++|+||||++..... ...++.|+|||.|+|+|+|++||++|++++++.++++|+|++.++.
T Consensus 428 g~dP~~F~PeRwl~~~~~~--~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~ 492 (516)
T PLN03195 428 GPDAASFKPERWIKDGVFQ--NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH 492 (516)
T ss_pred ccChhhcCCcccCCCCCcC--CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC
Confidence 999999999999642111 1244579999999999999999999999999999999999987654
No 14
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=6.9e-49 Score=342.50 Aligned_cols=202 Identities=37% Similarity=0.764 Sum_probs=182.0
Q ss_pred cchHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCC--Ccccc
Q 036874 26 SKDFLQTLLELQQQG--DYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALD--SVVEE 101 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~ 101 (233)
..|+++.|++..+++ +..++++++.++++++++||+|||+.+++|++++|++||++|+++++|++++++.+ ..++.
T Consensus 265 ~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~ 344 (502)
T PLN02966 265 TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTE 344 (502)
T ss_pred cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCH
Confidence 468999999865432 34589999999999999999999999999999999999999999999999998642 35788
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCC-CCCCCCCCCccCCCccC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKI 180 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~ 180 (233)
++++++||+++||+|++|++|+++...+|.+.+|+.++|+.||+||.|.++.|++||||++| |||++|+||||+++..
T Consensus 345 ~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~- 423 (502)
T PLN02966 345 DDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV- 423 (502)
T ss_pred hhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC-
Confidence 89999999999999999999999986679999999999999999999999999999999999 9999999999997532
Q ss_pred CCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 181 GDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 181 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
+....+..|+|||.|+|+|+|++||++|+++++|.++++|+|++++|.
T Consensus 424 -~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~ 471 (502)
T PLN02966 424 -DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM 471 (502)
T ss_pred -CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence 112245689999999999999999999999999999999999998875
No 15
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=5.6e-49 Score=342.42 Aligned_cols=196 Identities=29% Similarity=0.470 Sum_probs=170.3
Q ss_pred cchHHHHHHHHhhcC---CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccc
Q 036874 26 SKDFLQTLLELQQQG---DYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEF 102 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~---~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 102 (233)
.+|+++.+++..... ...++++++.+++.++++||+|||+++++|++++|+.||++|+++++|++.++ +.+
T Consensus 276 ~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~ 349 (500)
T PLN02169 276 SKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNE 349 (500)
T ss_pred CcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHH
Confidence 468999999764321 12478899999999999999999999999999999999999999999998864 567
Q ss_pred ccCCChhHHHHHHHHhcCCCCCCCcccccCCC-CCcccCeeeCCCCEEEeehhhhhcCCCCC-CCCCCCCCCccCCCccC
Q 036874 103 HLAKLPFLEANVKETLRLHPPAPLLTSRRPSA-TSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKI 180 (233)
Q Consensus 103 ~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~-~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~ 180 (233)
++.++||+++|++|++|++|++|... |.+.. ++.++|+.||+|+.|.++.|++||||++| +||++|+||||++..+.
T Consensus 350 dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~ 428 (500)
T PLN02169 350 DLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGG 428 (500)
T ss_pred HHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCC
Confidence 89999999999999999999999854 55544 45558999999999999999999999999 89999999999965322
Q ss_pred CCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 181 GDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 181 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
. ....++.|+|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 429 ~-~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~ 476 (500)
T PLN02169 429 L-RHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH 476 (500)
T ss_pred c-cCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC
Confidence 1 11236789999999999999999999999999999999999998664
No 16
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=7.8e-49 Score=339.08 Aligned_cols=199 Identities=22% Similarity=0.362 Sum_probs=178.7
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcC---CCcccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVAL---DSVVEE 101 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~ 101 (233)
...|+++.|+.... .+..+++++|.+++.++++||++||+++++|++++|+.||++|+++++|++.+++. +..++.
T Consensus 242 ~~~d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~ 320 (463)
T PLN02774 242 THTDMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDW 320 (463)
T ss_pred CcccHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCH
Confidence 35799999997432 23358999999999999999999999999999999999999999999999998753 345788
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG 181 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~ 181 (233)
++++++||+++||+|++|++|+++. ..|.+.+|++++|+.||||+.|+++.+.+|+||++|+||++|+||||++.+..
T Consensus 321 ~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~- 398 (463)
T PLN02774 321 NDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLE- 398 (463)
T ss_pred HHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcC-
Confidence 9999999999999999999999986 56999999999999999999999999999999999999999999999964311
Q ss_pred CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 182 DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 182 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
....++|||.|+|.|||++||++|++++++.++++|+|++.++..
T Consensus 399 ----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~ 443 (463)
T PLN02774 399 ----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDK 443 (463)
T ss_pred ----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCc
Confidence 123699999999999999999999999999999999999988764
No 17
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=9.1e-49 Score=342.81 Aligned_cols=205 Identities=43% Similarity=0.842 Sum_probs=184.2
Q ss_pred CcchHHHHHHHHhhc-----CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcc
Q 036874 25 SSKDFLQTLLELQQQ-----GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVV 99 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~-----~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~ 99 (233)
...|+++.|++...+ .+..++++++.+++..+++||++||+.+++|++++|++||++|+++++|++++++.+..+
T Consensus 269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~ 348 (517)
T PLN02687 269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV 348 (517)
T ss_pred ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence 456999999986542 234589999999999999999999999999999999999999999999999998776778
Q ss_pred cccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCcc
Q 036874 100 EEFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVK 179 (233)
Q Consensus 100 ~~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~ 179 (233)
+.+++.++||+++||+|++|++|+++...+|.+.+|+.++|+.||+|+.|.++.+++||||++|+||++|+||||++...
T Consensus 349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~ 428 (517)
T PLN02687 349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE 428 (517)
T ss_pred CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence 89999999999999999999999999867899999999999999999999999999999999999999999999997532
Q ss_pred CC--CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 180 IG--DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 180 ~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
.. .....+..++|||.|+|.|+|++||++|++++++.++++|+|+++++.
T Consensus 429 ~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 480 (517)
T PLN02687 429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQ 480 (517)
T ss_pred ccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCC
Confidence 11 112244579999999999999999999999999999999999998764
No 18
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=1.4e-48 Score=340.26 Aligned_cols=204 Identities=40% Similarity=0.838 Sum_probs=182.9
Q ss_pred cchHHHHHHHHhhc-CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccccc
Q 036874 26 SKDFLQTLLELQQQ-GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHL 104 (233)
Q Consensus 26 ~~d~l~~ll~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 104 (233)
..|+++.|++.... .+..++++++.++++++++||+|||+.+++|++++|+.||++|+++++|++++++.+..++.+++
T Consensus 266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~ 345 (504)
T PLN00110 266 NPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDL 345 (504)
T ss_pred CCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHh
Confidence 46899999975432 34469999999999999999999999999999999999999999999999999887677889999
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC-CC
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG-DF 183 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~-~~ 183 (233)
+++||+++||+|++|++|+++...+|.+.+|+.++|+.||+|+.|.++.+++|+||++|+||++|+||||++..... ..
T Consensus 346 ~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~ 425 (504)
T PLN00110 346 PKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDP 425 (504)
T ss_pred hcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCccccc
Confidence 99999999999999999999987789999999999999999999999999999999999999999999999643211 11
Q ss_pred CCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 184 RGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 184 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
......++|||.|+|.|+|++||++|++++++.++++|+|++.++.
T Consensus 426 ~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 471 (504)
T PLN00110 426 RGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV 471 (504)
T ss_pred CCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC
Confidence 1123579999999999999999999999999999999999998874
No 19
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=8.6e-49 Score=343.09 Aligned_cols=198 Identities=27% Similarity=0.494 Sum_probs=179.0
Q ss_pred CcchHHHHHHHHhhc---CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccc
Q 036874 25 SSKDFLQTLLELQQQ---GDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEE 101 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~---~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~ 101 (233)
...|+++.+++...+ ++..++++++.+++.++++||+|||+.+++|++++|+.||++|+++++|++++++.+ .++.
T Consensus 290 ~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~ 368 (516)
T PLN02290 290 YGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSV 368 (516)
T ss_pred CCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCH
Confidence 357999999975432 223478999999999999999999999999999999999999999999999998764 7889
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCC-CCCCCCCCCccCCCccC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKI 180 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~ 180 (233)
++++++||+++||+|++|++|+++. .+|.+.+|+.++|+.||+||.|.++.+++||||++| +||++|+||||+...
T Consensus 369 ~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~-- 445 (516)
T PLN02290 369 DHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP-- 445 (516)
T ss_pred HHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC--
Confidence 9999999999999999999999987 689999999999999999999999999999999999 899999999999532
Q ss_pred CCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 181 GDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 181 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
......++|||.|+|+|+|++||++|++++++.++++|+|+++++.
T Consensus 446 ---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~ 491 (516)
T PLN02290 446 ---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY 491 (516)
T ss_pred ---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc
Confidence 1123579999999999999999999999999999999999998763
No 20
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=2.5e-48 Score=340.20 Aligned_cols=203 Identities=32% Similarity=0.651 Sum_probs=182.4
Q ss_pred cchHHHHHHHHhhcCCC-CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccccc
Q 036874 26 SKDFLQTLLELQQQGDY-SLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHL 104 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~ 104 (233)
..|+++.|++...+.+. .+++++++.+++++++||++||+.+++|++++|+.||++|+++++|++++++.+..++.+++
T Consensus 291 ~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~ 370 (534)
T PLN03018 291 VEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDI 370 (534)
T ss_pred cccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHh
Confidence 46999999986543222 48999999999999999999999999999999999999999999999999976677888999
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCC--
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGD-- 182 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~-- 182 (233)
.++||+++||+|++|++|+++...+|.+.+|+.++|+.||||+.|.++.+++|+||++|+||++|+|+||++.++...
T Consensus 371 ~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~ 450 (534)
T PLN03018 371 PNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEV 450 (534)
T ss_pred cCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccc
Confidence 999999999999999999999866799999999999999999999999999999999999999999999996532110
Q ss_pred -CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCC
Q 036874 183 -FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228 (233)
Q Consensus 183 -~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g 228 (233)
....+..++|||.|+|.|+|++||++|++++++.++++|+|++.++
T Consensus 451 ~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 497 (534)
T PLN03018 451 TLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQD 497 (534)
T ss_pred cccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCC
Confidence 1124567999999999999999999999999999999999998775
No 21
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=4.4e-48 Score=343.08 Aligned_cols=198 Identities=29% Similarity=0.547 Sum_probs=177.9
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccccccC
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLA 105 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 105 (233)
..|+++.|++.. ..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++++ +..++.+++.
T Consensus 373 ~~dil~~Ll~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~ 447 (633)
T PLN02738 373 DPSILHFLLASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMK 447 (633)
T ss_pred cchHHHHHHHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHc
Confidence 458999998743 24899999999999999999999999999999999999999999999999987 4567899999
Q ss_pred CChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCCC
Q 036874 106 KLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRG 185 (233)
Q Consensus 106 ~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~ 185 (233)
+|||+++||+|++|++|+++. ..|.+.+|..++||.||+||.|.++.|.+||||++||||++|+||||+..........
T Consensus 448 kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~ 526 (633)
T PLN02738 448 KLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETN 526 (633)
T ss_pred cCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccC
Confidence 999999999999999999998 5588899999999999999999999999999999999999999999985321111123
Q ss_pred CCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 186 NNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 186 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
....++|||.|+|+|+|++||++|++++++.++++|+|++.++.
T Consensus 527 ~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~ 570 (633)
T PLN02738 527 QNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA 570 (633)
T ss_pred CCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC
Confidence 45689999999999999999999999999999999999998764
No 22
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=6.6e-48 Score=333.53 Aligned_cols=196 Identities=35% Similarity=0.606 Sum_probs=179.6
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccccccC
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLA 105 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 105 (233)
..|+++.|++.. ..++++++.+++.++++||+|||+++++|++++|+.||++|+++++|++.+++.+. ++.+++.
T Consensus 244 ~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~ 318 (466)
T PLN02655 244 RDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLP 318 (466)
T ss_pred cccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHh
Confidence 458999999754 24899999999999999999999999999999999999999999999999987644 8999999
Q ss_pred CChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCCC
Q 036874 106 KLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRG 185 (233)
Q Consensus 106 ~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~ 185 (233)
++||+++|++|++|++|+.+...+|.+.+|+.++|+.||+|+.|+++.+++||||++|+||++|+|+||++.... ..
T Consensus 319 ~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~---~~ 395 (466)
T PLN02655 319 NLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYE---SA 395 (466)
T ss_pred cChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCcc---cC
Confidence 999999999999999999998668999999999999999999999999999999999999999999999965321 11
Q ss_pred CCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 186 NNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 186 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
....++|||.|+|.|||++||..+++++++.++++|+|++.+|.
T Consensus 396 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~ 439 (466)
T PLN02655 396 DMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD 439 (466)
T ss_pred CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC
Confidence 34689999999999999999999999999999999999998764
No 23
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-48 Score=322.38 Aligned_cols=197 Identities=35% Similarity=0.527 Sum_probs=179.7
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcC-CCcccccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVAL-DSVVEEFH 103 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~ 103 (233)
+...++-.++..++ ++.+++..+++++++||.|||++++.|++|.|+.||+.|++|++|+..+++. +..++.+.
T Consensus 298 ~~~~~l~~~L~~~~-----l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~ 372 (519)
T KOG0159|consen 298 EYTGSLLELLLRKE-----LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKA 372 (519)
T ss_pred chhHHHHHHHHHcc-----CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHH
Confidence 34456666665443 7999999999999999999999999999999999999999999999999987 57788899
Q ss_pred cCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCC
Q 036874 104 LAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDF 183 (233)
Q Consensus 104 ~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~ 183 (233)
+.++|||+|||+|++|+||.++. ..|...+|..++||.|||||.|.+..+.+.+||++|++|++|+|+||++++. .
T Consensus 373 l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~ 448 (519)
T KOG0159|consen 373 LTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST---K 448 (519)
T ss_pred HhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc---C
Confidence 99999999999999999999998 5799999999999999999999999999999999999999999999998762 2
Q ss_pred CCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 184 RGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 184 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
..+++.++|||+|+|+|+||+||.+|+.++||+++++|+++...+..
T Consensus 449 ~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p 495 (519)
T KOG0159|consen 449 TIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP 495 (519)
T ss_pred CCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC
Confidence 44788999999999999999999999999999999999999887543
No 24
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=1.9e-47 Score=329.59 Aligned_cols=194 Identities=25% Similarity=0.400 Sum_probs=176.0
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhc----CCCcccc
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVA----LDSVVEE 101 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~ 101 (233)
..|+++.+++.. +..+++++++.+++++++||+|||+.+++|++++|+.||++|+++++|++++.+ .+..++.
T Consensus 232 ~~d~l~~ll~~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~ 308 (452)
T PLN03141 232 PKDVVDVLLRDG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYW 308 (452)
T ss_pred hhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCH
Confidence 469999999753 245899999999999999999999999999999999999999999999988753 2345678
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG 181 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~ 181 (233)
+++.++||+++||+|++|++|+++. .+|.+.+|+.++||.||+|+.|.++.+++|+||++|+||++|+||||++..
T Consensus 309 ~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~--- 384 (452)
T PLN03141 309 TDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD--- 384 (452)
T ss_pred HHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC---
Confidence 8899999999999999999999875 679999999999999999999999999999999999999999999999752
Q ss_pred CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 182 DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 182 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
..+..++|||.|+|.|+|++||++|+++++|.++++|+|+++++.
T Consensus 385 ---~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~ 429 (452)
T PLN03141 385 ---MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT 429 (452)
T ss_pred ---CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC
Confidence 135679999999999999999999999999999999999987763
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=3.1e-47 Score=330.97 Aligned_cols=200 Identities=28% Similarity=0.483 Sum_probs=178.1
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCcccccccC
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEFHLA 105 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~ 105 (233)
..|+++.|++.. ..+++++|.++++++++||++||+.+++|++++|++||++|+++++|++++++. ..++.+++.
T Consensus 260 ~~d~l~~ll~~~----~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~ 334 (489)
T PLN02936 260 DPSVLRFLLASR----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIK 334 (489)
T ss_pred chHHHHHHHhcc----ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHh
Confidence 468999999743 238999999999999999999999999999999999999999999999999874 457888899
Q ss_pred CChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCCC
Q 036874 106 KLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFRG 185 (233)
Q Consensus 106 ~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~ 185 (233)
+|||+++||+|++|++|+.+...+|.+..++.++|+.||+|+.|+++.+++||||++||||++|+|+||+.++.......
T Consensus 335 ~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~ 414 (489)
T PLN02936 335 ELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETN 414 (489)
T ss_pred hCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccC
Confidence 99999999999999999998877777778888899999999999999999999999999999999999996532211122
Q ss_pred CCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 186 NNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 186 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
.+..++|||.|+|.|||++||++|++++++.++++|+|+++++..
T Consensus 415 ~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~ 459 (489)
T PLN02936 415 TDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQD 459 (489)
T ss_pred CCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCc
Confidence 345799999999999999999999999999999999999987653
No 26
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=4.4e-47 Score=330.43 Aligned_cols=197 Identities=26% Similarity=0.417 Sum_probs=178.6
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCC----Cccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALD----SVVE 100 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~ 100 (233)
+..|+++.|++...+.+..++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++.+.+.. ..++
T Consensus 264 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~ 343 (490)
T PLN02302 264 RKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLT 343 (490)
T ss_pred CcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 457999999987544444589999999999999999999999999999999999999999999999987532 2367
Q ss_pred ccccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccC
Q 036874 101 EFHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKI 180 (233)
Q Consensus 101 ~~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~ 180 (233)
.++++++||++++|+|++|++|+++. ..|.+.+|+.++|+.||+|+.|.++.+++|+||++|+||++|+|+||++..
T Consensus 344 ~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~-- 420 (490)
T PLN02302 344 LKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT-- 420 (490)
T ss_pred HHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC--
Confidence 88999999999999999999999988 568899999999999999999999999999999999999999999999642
Q ss_pred CCCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCC
Q 036874 181 GDFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228 (233)
Q Consensus 181 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g 228 (233)
..+..++|||.|+|.|+|++||.+|++++++.++++|+|++.++
T Consensus 421 ----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 464 (490)
T PLN02302 421 ----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNP 464 (490)
T ss_pred ----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCC
Confidence 14567999999999999999999999999999999999998764
No 27
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=4e-47 Score=330.69 Aligned_cols=194 Identities=22% Similarity=0.393 Sum_probs=173.3
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCC-Cccccccc
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALD-SVVEEFHL 104 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~ 104 (233)
..|+++.+++.. .+++++.++++++++||+|||+.+++|++++|++||++|+++++|++.+.+.+ ..++.+++
T Consensus 277 ~~dll~~ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l 350 (502)
T PLN02426 277 SKDLLSRFMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEM 350 (502)
T ss_pred cchHHHHHHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHH
Confidence 579999999743 27789999999999999999999999999999999999999999999988653 36789999
Q ss_pred CCChhHHHHHHHHhcCCCCCCCcccccCCCCCcc-cCeeeCCCCEEEeehhhhhcCCCCC-CCCCCCCCCccCCCccCCC
Q 036874 105 AKLPFLEANVKETLRLHPPAPLLTSRRPSATSNL-SGYTIPKGSTIFINAWAIQRNPEVW-ENPQDFQPDRFLKDVKIGD 182 (233)
Q Consensus 105 ~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~~ 182 (233)
+++||+++||+|++|++|+++.. .|.+.+|..+ +|+.||+||.|.++.+++||||++| |||++|+||||++.+..
T Consensus 351 ~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~-- 427 (502)
T PLN02426 351 KEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF-- 427 (502)
T ss_pred hcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc--
Confidence 99999999999999999999985 5888877776 8999999999999999999999999 99999999999974211
Q ss_pred CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCC
Q 036874 183 FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228 (233)
Q Consensus 183 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g 228 (233)
....++.++|||.|+|.|+|+++|++|++++++.++++|+|+++++
T Consensus 428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~ 473 (502)
T PLN02426 428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGR 473 (502)
T ss_pred CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecC
Confidence 1224567999999999999999999999999999999999998654
No 28
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=2.5e-46 Score=323.34 Aligned_cols=192 Identities=22% Similarity=0.410 Sum_probs=175.8
Q ss_pred cchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcC---CCccccc
Q 036874 26 SKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVAL---DSVVEEF 102 (233)
Q Consensus 26 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~ 102 (233)
..|+++.+++. +.+++++++.++++.+++||++||+.+++|++++|++||++|+++++|++++.+. +..++.+
T Consensus 246 ~~d~l~~ll~~----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~ 321 (463)
T PLN02196 246 HNDLLGSFMGD----KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWE 321 (463)
T ss_pred cccHHHHHHhc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHH
Confidence 46899998862 2358999999999999999999999999999999999999999999999988753 3457888
Q ss_pred ccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCC
Q 036874 103 HLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGD 182 (233)
Q Consensus 103 ~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~ 182 (233)
++.++||++++++|++|++|+.+.. .|.+.+|+.++||.||||+.|+++.+++|+||++|+||++|+||||+...
T Consensus 322 ~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~---- 396 (463)
T PLN02196 322 DTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP---- 396 (463)
T ss_pred HHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC----
Confidence 9999999999999999999999984 58899999999999999999999999999999999999999999999631
Q ss_pred CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCC
Q 036874 183 FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGC 229 (233)
Q Consensus 183 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~ 229 (233)
.+..++|||.|+|.|+|+++|++|++++++.++++|+|++++++
T Consensus 397 ---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~ 440 (463)
T PLN02196 397 ---KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS 440 (463)
T ss_pred ---CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC
Confidence 34689999999999999999999999999999999999998764
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=6.5e-46 Score=320.87 Aligned_cols=198 Identities=26% Similarity=0.400 Sum_probs=178.2
Q ss_pred CcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcC---CCcccc
Q 036874 25 SSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVAL---DSVVEE 101 (233)
Q Consensus 25 ~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~ 101 (233)
...|+++.|++.. .++++++++.+++.+++||++||+.+++|++++|++||++++++++|++.+.+. ...++.
T Consensus 248 ~~~d~l~~ll~~~----~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~ 323 (472)
T PLN02987 248 KKKDMLAALLASD----DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEW 323 (472)
T ss_pred ccccHHHHHHhcC----CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCH
Confidence 3579999999753 258999999999999999999999999999999999999999999999988742 345678
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIG 181 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~ 181 (233)
+++.++||++++++|++|++|+++. ..|.+.+|+.++|+.||+|+.|+++.+.+|+||++|++|++|+|+||++....
T Consensus 324 ~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~- 401 (472)
T PLN02987 324 SDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT- 401 (472)
T ss_pred HHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-
Confidence 8899999999999999999999986 67999999999999999999999999999999999999999999999975321
Q ss_pred CCCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 182 DFRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 182 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
......++|||.|+|.|+|++||++|++++++.++++|+|+++++..
T Consensus 402 --~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~ 448 (472)
T PLN02987 402 --TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK 448 (472)
T ss_pred --CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc
Confidence 12345799999999999999999999999999999999999988764
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-46 Score=305.99 Aligned_cols=206 Identities=32% Similarity=0.594 Sum_probs=185.9
Q ss_pred CCCcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCc-ccc
Q 036874 23 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSV-VEE 101 (233)
Q Consensus 23 ~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~ 101 (233)
.....|+++.+++ ....+.+.++++++...+.+++||..|++.+..|++++|++||+++..+++|+.+++++... ++.
T Consensus 249 s~~~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~ 327 (486)
T KOG0684|consen 249 SKWDNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY 327 (486)
T ss_pred ccccHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence 3456799999999 44456678999999999999999999999999999999999999999999999999988544 899
Q ss_pred cccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccC----eeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCC
Q 036874 102 FHLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSG----YTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKD 177 (233)
Q Consensus 102 ~~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~ 177 (233)
+.++.+|.+++||+||+|++||.+. +.|.+.+|.++.+ |.||+|..|.++...+|+||++|++|+.|+|+||+++
T Consensus 328 d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~ 406 (486)
T KOG0684|consen 328 DQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD 406 (486)
T ss_pred HHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence 9999999999999999999998887 5699999999986 9999999999999999999999999999999999977
Q ss_pred ccCCCCCC--CCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCCCC
Q 036874 178 VKIGDFRG--NNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 178 ~~~~~~~~--~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
+++.+... -++.+||||.|.|.|||++||.+|+++++..+|++||+++.+|+.
T Consensus 407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~ 461 (486)
T KOG0684|consen 407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPF 461 (486)
T ss_pred CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCC
Confidence 65542222 344569999999999999999999999999999999999999754
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.2e-42 Score=293.97 Aligned_cols=177 Identities=37% Similarity=0.639 Sum_probs=166.4
Q ss_pred CCCcchHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhhcCCCccccc
Q 036874 23 GKSSKDFLQTLLELQQQGDYSLSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVVALDSVVEEF 102 (233)
Q Consensus 23 ~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 102 (233)
..+.+|+++.|+....+++..+++++|+++++++++||+|||+++++|+++.|++||+.++++++|.+.
T Consensus 211 ~~~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------- 279 (411)
T COG2124 211 AAPRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------- 279 (411)
T ss_pred cCCcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------
Confidence 456789999999988765556999999999999999999999999999999999999999999998764
Q ss_pred ccCCChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCC
Q 036874 103 HLAKLPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGD 182 (233)
Q Consensus 103 ~~~~~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~ 182 (233)
+|+.++++|++|++|+++. ..|.+.+|+.++|+.||+|+.|+++.+++||||++|++|++|||+||.
T Consensus 280 -----~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------- 346 (411)
T COG2124 280 -----PLLEAVVEETLRLYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------- 346 (411)
T ss_pred -----HHHHHHHHHHHHhCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------
Confidence 6889999999999999999 889999999999999999999999999999999999999999999986
Q ss_pred CCCCCccccccCCCCCCCCcHHHHHHHHHHHHHHHhHhceeeCCCC
Q 036874 183 FRGNNFNYLPFGSGRRICLAIPLAEKIVPYVLANLLHLFEWSLPEG 228 (233)
Q Consensus 183 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~~l~~f~~~~~~g 228 (233)
..++|||.|+|.|+|..||++|++++++.++++|++....+
T Consensus 347 -----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~ 387 (411)
T COG2124 347 -----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAE 387 (411)
T ss_pred -----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence 46999999999999999999999999999999999888766
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=2.4e-39 Score=279.23 Aligned_cols=190 Identities=20% Similarity=0.365 Sum_probs=161.1
Q ss_pred HHHHHhhcCCCCCCHHHHHHHHHH-HHhhcccchHHHHHHHHHHHhhCHH-HHHHHHHHHhhhhcC-CCcccccccCCCh
Q 036874 32 TLLELQQQGDYSLSMDQIKALFMD-LVIGSTDTTSITVEWAMSELLQKPE-VMRKACNELGQVVAL-DSVVEEFHLAKLP 108 (233)
Q Consensus 32 ~ll~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~~~ 108 (233)
.+++...+ .++++++++++++. +.++++++++.+++|++++|+.||+ +++++++|++.+++. +..++.+++.++|
T Consensus 257 ~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~ 334 (480)
T PLN02648 257 EALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMP 334 (480)
T ss_pred HHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCH
Confidence 55554433 34999999999875 4466778888899999999999995 999999999999863 4567889999999
Q ss_pred hHHHHHHHHhcCCCCCCCcccccCCCCCccc----CeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCCC
Q 036874 109 FLEANVKETLRLHPPAPLLTSRRPSATSNLS----GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDFR 184 (233)
Q Consensus 109 ~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~ 184 (233)
|+++|++|++|++|+++. ..|.+.+|+.++ ||.||+|+.|+++.+.+||||++|+||++|+|+||++....
T Consensus 335 yl~avi~EtLRl~p~v~~-~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---- 409 (480)
T PLN02648 335 LVKSVVYEALRIEPPVPF-QYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---- 409 (480)
T ss_pred HHHHHHHHHHhhcCCccc-ccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc----
Confidence 999999999999999998 457788999996 79999999999999999999999999999999999864321
Q ss_pred CCCcccccc---------CCCCCCCCcHHHHHHHHHHHHHHHhHhce-eeCCCCC
Q 036874 185 GNNFNYLPF---------GSGRRICLAIPLAEKIVPYVLANLLHLFE-WSLPEGC 229 (233)
Q Consensus 185 ~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~l~~~l~~f~-~~~~~g~ 229 (233)
....+++| |.|+|.|+|++||++|++++++.++++|+ |++.++.
T Consensus 410 -~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~ 463 (480)
T PLN02648 410 -KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT 463 (480)
T ss_pred -ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence 11234444 66789999999999999999999999998 9987764
No 33
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=56.50 E-value=8.6 Score=23.26 Aligned_cols=8 Identities=38% Similarity=0.974 Sum_probs=6.5
Q ss_pred CCCccCCC
Q 036874 170 QPDRFLKD 177 (233)
Q Consensus 170 ~P~R~~~~ 177 (233)
||||||..
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78999864
No 34
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.97 E-value=17 Score=21.75 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=17.8
Q ss_pred HHHHHHhhCHHHHHHHHHHHhhh
Q 036874 70 WAMSELLQKPEVMRKACNELGQV 92 (233)
Q Consensus 70 ~~~~~l~~~p~~~~~l~~Ei~~~ 92 (233)
-++.||.+||++.+++.+.-...
T Consensus 4 ~iV~YLv~nPevl~kl~~g~asL 26 (57)
T PF05952_consen 4 EIVNYLVQNPEVLEKLKEGEASL 26 (57)
T ss_pred HHHHHHHHChHHHHHHHcCCeeE
Confidence 46789999999999998743333
No 35
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=47.55 E-value=17 Score=26.05 Aligned_cols=23 Identities=17% Similarity=0.337 Sum_probs=16.8
Q ss_pred CCCCcHHHHHHHHHHHHHHHhHh
Q 036874 198 RICLAIPLAEKIVPYVLANLLHL 220 (233)
Q Consensus 198 r~C~G~~~A~~~~~~~l~~~l~~ 220 (233)
.+|.|+.||...+-.++..++..
T Consensus 18 yN~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 18 YNCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp EETTS----HHHHHHHHHHHHHS
T ss_pred ecccchHHHHHHHHHHHHHHhcC
Confidence 38999999999999999999864
No 36
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=45.13 E-value=14 Score=24.13 Aligned_cols=23 Identities=13% Similarity=0.288 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhHhceeeCCCCCC
Q 036874 208 KIVPYVLANLLHLFEWSLPEGCY 230 (233)
Q Consensus 208 ~~~~~~l~~~l~~f~~~~~~g~~ 230 (233)
.-|+-++.++|+-|||.+++=+.
T Consensus 60 ~~IrdAVsqVLkGYDWtLVPmPv 82 (84)
T PF12444_consen 60 VCIRDAVSQVLKGYDWTLVPMPV 82 (84)
T ss_pred HHHHHHHHHHhccCCceeeeccc
Confidence 35788999999999999987543
No 37
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=42.84 E-value=48 Score=27.60 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCCCCC---CcccccCCCCCccc----CeeeCCCCEEEeehhhhhcCCCCCCCCCCCCCCccCCCccCCCC
Q 036874 111 EANVKETLRLHPPAP---LLTSRRPSATSNLS----GYTIPKGSTIFINAWAIQRNPEVWENPQDFQPDRFLKDVKIGDF 183 (233)
Q Consensus 111 ~~~i~E~lRl~~~~~---~~~~r~~~~~~~~~----g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~ 183 (233)
+.+++.+..+.||.. +.+.-..+.|..+- .-.|..||.|.++
T Consensus 276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------- 324 (361)
T COG1759 276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------- 324 (361)
T ss_pred HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-------------------------------
Confidence 566777778888754 33333344454442 2345555544332
Q ss_pred CCCCccccccCCCCCCCCcHHHHHHHHHHHH
Q 036874 184 RGNNFNYLPFGSGRRICLAIPLAEKIVPYVL 214 (233)
Q Consensus 184 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l 214 (233)
+.+++++-||-+ +..|+++|. |++.++
T Consensus 325 -GspYs~l~~~~p--ms~GrRIA~-EIk~A~ 351 (361)
T COG1759 325 -GSPYSNLYWGEP--MSTGRRIAR-EIKEAI 351 (361)
T ss_pred -CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence 134555556644 779999998 777654
No 38
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=40.17 E-value=13 Score=21.91 Aligned_cols=11 Identities=45% Similarity=0.896 Sum_probs=8.8
Q ss_pred cccCCCCCCCC
Q 036874 191 LPFGSGRRICL 201 (233)
Q Consensus 191 ~~Fg~G~r~C~ 201 (233)
-+||-|.|.|-
T Consensus 12 ~kfg~GsrsC~ 22 (56)
T KOG3506|consen 12 RKFGQGSRSCR 22 (56)
T ss_pred cccCCCCccee
Confidence 35999999984
No 39
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=37.98 E-value=82 Score=18.16 Aligned_cols=43 Identities=19% Similarity=0.211 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHH
Q 036874 47 DQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNEL 89 (233)
Q Consensus 47 ~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei 89 (233)
-++...+..++-.|.+-.+..++--+...--||+....+.+|+
T Consensus 5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el 47 (48)
T PF12554_consen 5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL 47 (48)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence 3456667777777888877777777778888888888777765
No 40
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=35.54 E-value=58 Score=21.60 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHhhhh
Q 036874 65 SITVEWAMSELLQKPEVMRKACNELGQVV 93 (233)
Q Consensus 65 ~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 93 (233)
..++.|.+...-.+|+..+.+++||+++-
T Consensus 53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 53 LFTLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 45788999999999999999999998864
No 41
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.89 E-value=33 Score=26.49 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=30.1
Q ss_pred ChhHHHHHHHHhcCCCCCCCcccccCCCCCcccCeeeCCCCEEEe
Q 036874 107 LPFLEANVKETLRLHPPAPLLTSRRPSATSNLSGYTIPKGSTIFI 151 (233)
Q Consensus 107 ~~~l~~~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~ 151 (233)
-....|||+|+..+....- +.-...+|+.++|..||+|+.|..
T Consensus 52 ~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 52 KNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence 3456788888876654222 222347889999999999998865
No 42
>PF11227 DUF3025: Protein of unknown function (DUF3025); InterPro: IPR021390 Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function.
Probab=33.70 E-value=22 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.623 Sum_probs=17.1
Q ss_pred hhhcCCCCCCCCCCCCCCc
Q 036874 155 AIQRNPEVWENPQDFQPDR 173 (233)
Q Consensus 155 ~~~~d~~~~~~p~~F~P~R 173 (233)
..+.|+.+|.|+..|+|.|
T Consensus 193 ~~n~~~~FY~d~~~FRp~R 211 (212)
T PF11227_consen 193 PDNEDPAFYDDTDVFRPGR 211 (212)
T ss_pred CCCCCcccccCccccCCCC
Confidence 4489999999999999988
No 43
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=26.90 E-value=45 Score=23.47 Aligned_cols=20 Identities=30% Similarity=0.466 Sum_probs=16.7
Q ss_pred CCCCCcccCeeeCCCCEEEe
Q 036874 132 PSATSNLSGYTIPKGSTIFI 151 (233)
Q Consensus 132 ~~~~~~~~g~~ip~g~~v~~ 151 (233)
...|..+.|..||+|++|+.
T Consensus 73 ~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 73 APEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred cCCCcccCCeeecceEEEEE
Confidence 35588899999999999955
No 44
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=25.06 E-value=22 Score=26.65 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=24.0
Q ss_pred CCCCCCccCCCccCCCCCCCCccccccCCCCCCCCcHH
Q 036874 167 QDFQPDRFLKDVKIGDFRGNNFNYLPFGSGRRICLAIP 204 (233)
Q Consensus 167 ~~F~P~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~ 204 (233)
.+|+|++|-.- --....+.-+.+-|..|+-.|.|-.
T Consensus 35 aeYnP~qFpGl--v~Rl~ePk~a~LIF~SGK~VcTGaK 70 (185)
T COG2101 35 AEYNPEQFPGL--VYRLEEPKTAALIFRSGKVVCTGAK 70 (185)
T ss_pred CccCHhHCCee--EEEecCCcceEEEEecCcEEEeccC
Confidence 57888888421 0111224457899999999999964
No 45
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=23.69 E-value=1.5e+02 Score=19.55 Aligned_cols=43 Identities=14% Similarity=0.314 Sum_probs=25.9
Q ss_pred HHHHHhhcccchHHHHHHHHHHHhh-------CHHHHHHHHHHHhhhhcC
Q 036874 53 FMDLVIGSTDTTSITVEWAMSELLQ-------KPEVMRKACNELGQVVAL 95 (233)
Q Consensus 53 ~~~~~~ag~~tt~~~l~~~~~~l~~-------~p~~~~~l~~Ei~~~~~~ 95 (233)
++.+|+.-..+|+.+.---+..+.. .|++...+++||-+|+..
T Consensus 3 l~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K 52 (88)
T COG0851 3 LFDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK 52 (88)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence 3455554333566555443333222 378899999999888764
No 46
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=22.23 E-value=2.3e+02 Score=18.31 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhhCHHHHHHHHHHHhhhh
Q 036874 44 LSMDQIKALFMDLVIGSTDTTSITVEWAMSELLQKPEVMRKACNELGQVV 93 (233)
Q Consensus 44 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 93 (233)
.............++--+..++..+.-.+.+-++||+...++.+.+..-+
T Consensus 29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 45566667777888999999999999999999999999988888876543
Done!