Query 036879
Match_columns 1029
No_of_seqs 870 out of 6749
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 10:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036879.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036879hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 5.4E-87 1.9E-91 833.8 40.0 641 3-670 10-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 3E-68 1E-72 664.7 33.9 568 73-660 51-721 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-62 3.6E-67 609.4 42.8 588 53-661 9-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 9.6E-62 3.3E-66 600.8 43.1 578 36-638 4-627 (680)
5 3t6q_A CD180 antigen; protein- 100.0 6.1E-58 2.1E-62 559.0 36.4 531 54-637 18-564 (606)
6 4eco_A Uncharacterized protein 100.0 3.9E-58 1.3E-62 560.2 25.1 512 4-609 29-600 (636)
7 3t6q_A CD180 antigen; protein- 100.0 5.1E-56 1.7E-60 542.0 37.0 535 76-661 16-565 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-55 5.3E-60 555.7 40.4 528 54-637 10-564 (844)
9 3vq2_A TLR4, TOLL-like recepto 100.0 6E-56 2.1E-60 541.4 35.4 525 52-638 15-563 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 1.2E-55 4.2E-60 545.4 33.6 533 3-633 267-864 (876)
11 3vq2_A TLR4, TOLL-like recepto 100.0 6E-55 2.1E-59 532.6 32.1 525 74-661 13-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-53 5E-58 537.7 37.0 529 36-613 14-564 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 2.9E-51 1E-55 496.4 33.2 529 56-660 15-560 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 6.4E-51 2.2E-55 490.9 26.8 499 35-638 3-515 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 4.4E-49 1.5E-53 477.3 32.9 515 75-661 10-536 (570)
16 4eco_A Uncharacterized protein 100.0 2.7E-50 9.2E-55 491.1 22.2 538 5-661 27-631 (636)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-50 4.7E-55 441.3 15.7 256 738-1016 13-292 (299)
18 3omv_A RAF proto-oncogene seri 100.0 3.6E-50 1.2E-54 437.6 18.2 260 736-1016 34-303 (307)
19 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-48 4.8E-53 479.5 34.7 564 21-660 9-584 (635)
20 4aoj_A High affinity nerve gro 100.0 4.8E-50 1.6E-54 443.2 17.5 256 738-1016 41-322 (329)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1E-48 3.6E-53 471.6 25.6 491 76-660 9-514 (549)
22 4gt4_A Tyrosine-protein kinase 100.0 9.8E-50 3.3E-54 436.5 14.1 250 739-1011 27-304 (308)
23 4fih_A Serine/threonine-protei 100.0 4.7E-49 1.6E-53 433.8 16.7 246 738-1007 74-324 (346)
24 4b9d_A Serine/threonine-protei 100.0 4.4E-49 1.5E-53 434.8 13.5 247 737-1007 23-277 (350)
25 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-48 5.1E-53 428.7 16.7 252 737-1015 57-318 (336)
26 3hmm_A TGF-beta receptor type- 100.0 2.6E-48 9E-53 426.7 17.9 272 738-1014 3-298 (303)
27 2z7x_B TOLL-like receptor 1, v 100.0 9.6E-48 3.3E-52 459.7 22.2 440 121-637 21-485 (520)
28 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-48 4.9E-53 423.4 13.2 245 738-1007 32-285 (311)
29 3hyh_A Carbon catabolite-derep 100.0 4.7E-48 1.6E-52 413.9 16.3 243 737-1007 12-263 (275)
30 4ecn_A Leucine-rich repeat pro 100.0 7E-47 2.4E-51 467.3 28.1 468 121-662 323-872 (876)
31 4fie_A Serine/threonine-protei 100.0 6.8E-48 2.3E-52 435.0 17.3 246 738-1007 151-401 (423)
32 3fpq_A Serine/threonine-protei 100.0 1.9E-47 6.4E-52 413.2 19.7 242 741-1007 29-283 (290)
33 4ase_A Vascular endothelial gr 100.0 9.7E-48 3.3E-52 428.1 14.1 262 731-1014 57-348 (353)
34 2z7x_B TOLL-like receptor 1, v 100.0 8.3E-47 2.8E-51 451.6 22.7 456 124-661 3-486 (520)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-47 4.3E-52 416.3 9.9 244 738-1007 24-282 (304)
36 4g8a_A TOLL-like receptor 4; l 100.0 4.8E-45 1.6E-49 448.0 33.2 555 4-637 7-584 (635)
37 4g31_A Eukaryotic translation 100.0 2.8E-45 9.6E-50 400.2 18.8 245 738-1007 5-280 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-44 5.2E-49 435.7 27.0 459 75-638 34-515 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.9E-44 2.4E-48 429.9 25.3 463 51-613 34-514 (562)
40 4b99_A Mitogen-activated prote 100.0 6.4E-44 2.2E-48 404.5 16.9 265 737-1007 53-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 4.2E-43 1.4E-47 393.8 17.4 194 735-937 18-249 (361)
42 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-42 5.8E-47 384.5 20.9 225 1-239 2-234 (313)
43 3uto_A Twitchin; kinase, muscl 100.0 1.7E-42 6E-47 412.6 18.5 249 737-1007 156-411 (573)
44 3v5w_A G-protein coupled recep 100.0 1.8E-42 6.1E-47 407.5 17.4 246 737-1007 188-450 (689)
45 1jl5_A Outer protein YOPM; leu 100.0 1.8E-41 6.2E-46 395.0 22.3 420 95-638 10-434 (454)
46 3v47_A TOLL-like receptor 5B a 100.0 1.9E-40 6.6E-45 389.6 29.3 231 33-327 5-250 (455)
47 3v47_A TOLL-like receptor 5B a 100.0 1.1E-40 3.8E-45 391.6 24.9 376 229-639 13-414 (455)
48 1jl5_A Outer protein YOPM; leu 100.0 1.2E-40 4.2E-45 388.0 23.7 423 49-595 12-439 (454)
49 3uim_A Brassinosteroid insensi 100.0 6.6E-41 2.2E-45 375.1 20.5 280 725-1010 17-308 (326)
50 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-40 4.1E-45 370.1 21.5 260 737-1017 9-286 (310)
51 2qkw_B Protein kinase; three-h 100.0 1.3E-40 4.4E-45 371.7 18.3 274 731-1013 32-315 (321)
52 3fxz_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 363.1 19.4 247 737-1007 19-270 (297)
53 3soc_A Activin receptor type-2 100.0 8.5E-40 2.9E-44 365.0 20.3 273 736-1015 22-320 (322)
54 3zgw_A Maternal embryonic leuc 100.0 2.2E-40 7.4E-45 371.4 15.0 249 736-1009 8-263 (347)
55 4hcu_A Tyrosine-protein kinase 100.0 2.7E-40 9.3E-45 359.2 15.3 254 737-1014 9-267 (269)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.6E-40 1.2E-44 358.0 16.2 255 736-1014 6-265 (268)
57 3p86_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 364.6 16.3 262 735-1020 34-305 (309)
58 3kul_A Ephrin type-A receptor 100.0 7.3E-40 2.5E-44 365.7 17.6 257 737-1016 48-316 (325)
59 2nru_A Interleukin-1 receptor- 100.0 7.7E-39 2.6E-43 355.0 25.2 278 724-1013 11-306 (307)
60 2psq_A Fibroblast growth facto 100.0 1.1E-39 3.6E-44 370.8 18.3 256 737-1015 80-366 (370)
61 3fe3_A MAP/microtubule affinit 100.0 6.1E-40 2.1E-44 365.8 15.5 245 736-1007 13-265 (328)
62 4aw2_A Serine/threonine-protei 100.0 2.6E-40 8.9E-45 381.4 12.6 259 730-1007 66-339 (437)
63 3ugc_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 363.2 12.7 270 737-1015 9-293 (295)
64 1tki_A Titin; serine kinase, m 100.0 2.5E-39 8.6E-44 360.3 19.2 249 737-1008 4-259 (321)
65 2c30_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 359.4 20.2 259 726-1008 23-296 (321)
66 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-40 1.4E-44 375.7 12.8 257 736-1015 112-376 (377)
67 3gen_A Tyrosine-protein kinase 100.0 1.3E-39 4.6E-44 356.6 15.9 255 736-1014 22-281 (283)
68 4eqm_A Protein kinase; transfe 100.0 2.4E-39 8.3E-44 356.3 17.9 259 737-1015 10-277 (294)
69 2yab_A Death-associated protei 100.0 5.6E-39 1.9E-43 362.3 20.3 248 737-1007 11-273 (361)
70 2qol_A Ephrin receptor; recept 100.0 1.8E-39 6E-44 369.2 16.3 256 737-1015 44-311 (373)
71 1o6l_A RAC-beta serine/threoni 100.0 3.5E-39 1.2E-43 360.6 17.2 245 737-1007 4-261 (337)
72 3niz_A Rhodanese family protei 100.0 5.3E-39 1.8E-43 356.5 18.3 266 736-1007 19-301 (311)
73 3v8s_A RHO-associated protein 100.0 1.6E-39 5.6E-44 371.9 13.9 255 731-1007 62-330 (410)
74 1csn_A Casein kinase-1; phosph 100.0 2.1E-38 7E-43 350.0 22.1 266 737-1021 9-291 (298)
75 1mp8_A Focal adhesion kinase 1 100.0 4E-39 1.4E-43 352.3 15.3 256 736-1015 13-278 (281)
76 3bz5_A Internalin-J, INLJ; leu 100.0 4.8E-38 1.6E-42 366.5 25.3 364 59-566 29-392 (457)
77 3t9t_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 349.7 14.5 254 737-1014 7-265 (267)
78 2vd5_A DMPK protein; serine/th 100.0 3.2E-39 1.1E-43 369.8 14.5 258 730-1007 53-328 (412)
79 2izr_A Casein kinase I isoform 100.0 1.4E-38 4.9E-43 356.5 19.5 261 737-1017 8-285 (330)
80 2y0a_A Death-associated protei 100.0 1.8E-38 6E-43 354.7 20.0 248 737-1007 10-272 (326)
81 3lb7_A RAF proto-oncogene seri 100.0 9.2E-39 3.1E-43 353.7 17.5 260 736-1016 34-303 (307)
82 3q4u_A Activin receptor type-1 100.0 3.2E-38 1.1E-42 349.0 21.8 261 736-1011 6-300 (301)
83 1kob_A Twitchin; kinase, intra 100.0 1.1E-38 3.7E-43 363.2 18.2 249 737-1007 50-305 (387)
84 4f0f_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 350.1 17.6 249 737-1011 18-287 (287)
85 3c0i_A Peripheral plasma membr 100.0 7.7E-39 2.6E-43 361.4 16.7 249 737-1007 23-287 (351)
86 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.1E-39 1.4E-43 362.5 14.1 245 736-1006 21-280 (353)
87 4fr4_A YANK1, serine/threonine 100.0 1.2E-38 4E-43 361.5 18.0 246 737-1006 14-271 (384)
88 3mdy_A Bone morphogenetic prot 100.0 7.4E-38 2.5E-42 352.1 24.3 274 734-1016 33-334 (337)
89 3vhe_A Vascular endothelial gr 100.0 4.4E-39 1.5E-43 365.5 14.1 264 729-1014 13-356 (359)
90 1qcf_A Haematopoetic cell kina 100.0 3.5E-39 1.2E-43 377.2 13.1 254 736-1014 186-445 (454)
91 3soa_A Calcium/calmodulin-depe 100.0 1.7E-38 5.9E-43 367.8 18.4 250 736-1007 9-268 (444)
92 1luf_A Muscle-specific tyrosin 100.0 7E-39 2.4E-43 361.4 14.7 261 735-1018 44-340 (343)
93 3o0g_A Cell division protein k 100.0 1.6E-38 5.5E-43 349.6 17.0 265 738-1007 2-283 (292)
94 3op5_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 361.1 17.5 271 736-1020 33-336 (364)
95 3tt0_A Basic fibroblast growth 100.0 1.6E-38 5.5E-43 363.3 17.5 258 736-1016 67-355 (382)
96 2bdw_A Hypothetical protein K1 100.0 2E-38 6.9E-43 359.0 17.9 248 737-1007 28-285 (362)
97 2x4f_A Myosin light chain kina 100.0 1.7E-38 5.9E-43 360.8 17.1 243 743-1007 94-343 (373)
98 3tki_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 355.7 15.1 249 737-1007 6-262 (323)
99 1ob3_A PFPK5, cell division co 100.0 9.5E-39 3.2E-43 350.7 14.3 264 738-1007 2-281 (288)
100 2id5_A Lingo-1, leucine rich r 100.0 6.2E-38 2.1E-42 370.4 22.3 329 317-661 33-361 (477)
101 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.6E-39 2.3E-43 358.0 13.1 244 737-1008 8-260 (336)
102 4euu_A Serine/threonine-protei 100.0 5E-38 1.7E-42 350.4 19.9 270 737-1012 8-308 (319)
103 3l9p_A Anaplastic lymphoma kin 100.0 5E-39 1.7E-43 365.0 12.0 257 737-1016 70-348 (367)
104 4e5w_A Tyrosine-protein kinase 100.0 1.1E-38 3.9E-43 352.8 14.3 267 737-1012 20-301 (302)
105 1opk_A P150, C-ABL, proto-onco 100.0 1E-38 3.5E-43 376.7 14.6 253 737-1013 219-478 (495)
106 1k9a_A Carboxyl-terminal SRC k 100.0 2.7E-38 9.4E-43 368.9 18.1 249 736-1014 191-446 (450)
107 4dc2_A Protein kinase C IOTA t 100.0 1.3E-38 4.6E-43 362.2 15.1 255 736-1007 50-319 (396)
108 1u59_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 345.3 18.5 261 738-1022 9-281 (287)
109 3poz_A Epidermal growth factor 100.0 1.2E-38 4E-43 356.5 14.1 254 737-1014 14-279 (327)
110 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-38 1E-42 350.5 17.2 242 737-1007 5-259 (318)
111 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 351.4 14.1 246 737-1007 12-293 (298)
112 3cc6_A Protein tyrosine kinase 100.0 2.3E-38 7.9E-43 346.3 15.6 255 736-1014 10-274 (281)
113 2ivs_A Proto-oncogene tyrosine 100.0 3.2E-38 1.1E-42 351.3 16.8 256 736-1014 21-312 (314)
114 3lxl_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 357.0 12.9 272 737-1016 22-306 (327)
115 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-38 3.9E-43 372.3 13.4 255 736-1015 182-442 (452)
116 1xjd_A Protein kinase C, theta 100.0 9.4E-39 3.2E-43 358.1 12.2 247 734-1006 13-269 (345)
117 3kfa_A Tyrosine-protein kinase 100.0 1E-38 3.4E-43 350.6 12.1 256 736-1015 11-273 (288)
118 3dtc_A Mitogen-activated prote 100.0 2.2E-38 7.5E-43 344.6 14.6 250 737-1011 6-271 (271)
119 3qd2_B Eukaryotic translation 100.0 8E-38 2.7E-42 351.0 19.6 246 737-1007 5-326 (332)
120 4fvq_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 352.3 10.3 250 737-1015 7-277 (289)
121 2pmi_A Negative RE, cyclin-dep 100.0 7.2E-38 2.5E-42 348.5 18.8 265 737-1007 4-294 (317)
122 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-38 1.1E-42 351.6 15.9 268 740-1018 33-315 (318)
123 3p1a_A MYT1 kinase, membrane-a 100.0 5.1E-38 1.7E-42 348.7 17.5 243 737-1007 56-305 (311)
124 1t46_A HOMO sapiens V-KIT hard 100.0 3.2E-38 1.1E-42 351.1 15.6 260 736-1017 21-311 (313)
125 3qup_A Tyrosine-protein kinase 100.0 3.3E-38 1.1E-42 352.6 15.5 258 736-1016 21-301 (323)
126 3kmu_A ILK, integrin-linked ki 100.0 2.9E-38 1E-42 343.5 14.6 248 737-1013 9-270 (271)
127 3f3z_A Calcium/calmodulin-depe 100.0 7.7E-38 2.6E-42 341.4 17.9 248 737-1007 8-262 (277)
128 2ac3_A MAP kinase-interacting 100.0 9.5E-38 3.2E-42 347.8 18.8 264 737-1007 11-296 (316)
129 3a8x_A Protein kinase C IOTA t 100.0 3.8E-38 1.3E-42 354.0 15.7 254 737-1007 8-276 (345)
130 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-37 3.7E-42 345.4 18.9 254 737-1017 7-267 (307)
131 3c1x_A Hepatocyte growth facto 100.0 2.6E-38 8.7E-43 359.1 14.0 257 739-1018 90-360 (373)
132 3og7_A AKAP9-BRAF fusion prote 100.0 3.6E-38 1.2E-42 346.3 14.6 257 736-1013 22-288 (289)
133 1rjb_A FL cytokine receptor; k 100.0 3.9E-38 1.3E-42 355.4 15.2 260 735-1016 42-337 (344)
134 4hgt_A Casein kinase I isoform 100.0 1.6E-37 5.5E-42 342.5 19.7 267 735-1020 6-287 (296)
135 3cok_A Serine/threonine-protei 100.0 5E-38 1.7E-42 343.1 15.5 246 737-1007 10-263 (278)
136 1o6v_A Internalin A; bacterial 100.0 2.1E-36 7E-41 355.7 30.3 151 424-610 239-389 (466)
137 1qpc_A LCK kinase; alpha beta 100.0 4.5E-38 1.5E-42 343.7 15.0 256 736-1016 11-272 (279)
138 3g2f_A Bone morphogenetic prot 100.0 8.2E-38 2.8E-42 351.6 17.5 280 736-1025 11-330 (336)
139 3gni_B Strad alpha; kinase fol 100.0 1.1E-37 3.9E-42 357.6 19.0 264 736-1007 23-334 (389)
140 2i0e_A Protein kinase C-beta I 100.0 3.6E-38 1.2E-42 354.5 14.4 246 736-1007 18-277 (353)
141 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.9E-38 1.7E-42 353.5 15.3 242 737-1007 40-294 (350)
142 3a62_A Ribosomal protein S6 ki 100.0 4.7E-38 1.6E-42 351.4 14.7 245 737-1007 16-277 (327)
143 2h34_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 345.9 17.5 259 736-1016 32-299 (309)
144 2pvf_A Fibroblast growth facto 100.0 9.2E-38 3.1E-42 350.6 17.1 258 736-1016 33-321 (334)
145 3kex_A Receptor tyrosine-prote 100.0 1.8E-38 6.1E-43 354.8 11.2 255 737-1015 12-278 (325)
146 2buj_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 350.0 14.9 259 736-1015 27-308 (317)
147 2w4o_A Calcium/calmodulin-depe 100.0 7.6E-38 2.6E-42 352.8 16.3 248 736-1007 51-306 (349)
148 2y94_A 5'-AMP-activated protei 100.0 7.7E-38 2.6E-42 364.5 16.8 244 737-1007 15-267 (476)
149 2eue_A Carbon catabolite derep 100.0 6E-38 2E-42 341.9 14.9 243 737-1007 12-263 (275)
150 2ozo_A Tyrosine-protein kinase 100.0 8.6E-38 2.9E-42 377.4 17.5 260 740-1023 337-608 (613)
151 3uzp_A CKI-delta, CKID, casein 100.0 2.9E-37 9.9E-42 340.4 20.3 267 736-1021 7-288 (296)
152 3fdn_A Serine/threonine-protei 100.0 8.8E-38 3E-42 341.4 15.9 245 736-1008 7-259 (279)
153 3hko_A Calcium/calmodulin-depe 100.0 7.2E-38 2.5E-42 353.4 15.5 255 733-1007 21-331 (345)
154 1mqb_A Ephrin type-A receptor 100.0 1.4E-37 4.6E-42 348.7 17.6 257 737-1016 43-312 (333)
155 2w1i_A JAK2; chromosomal rearr 100.0 7.8E-38 2.7E-42 349.9 15.6 268 737-1016 40-325 (326)
156 1u5q_A Serine/threonine protei 100.0 4.3E-38 1.5E-42 354.2 13.5 243 738-1008 54-307 (348)
157 2a2a_A Death-associated protei 100.0 2.1E-37 7.2E-42 345.6 18.9 248 737-1007 11-273 (321)
158 3lzb_A Epidermal growth factor 100.0 8.1E-38 2.8E-42 349.5 15.1 254 737-1014 14-279 (327)
159 3ork_A Serine/threonine protei 100.0 2.8E-38 9.7E-43 351.0 11.4 257 737-1014 11-282 (311)
160 3f66_A Hepatocyte growth facto 100.0 1E-37 3.5E-42 344.4 15.5 257 737-1016 24-294 (298)
161 3llt_A Serine/threonine kinase 100.0 1.5E-37 5.1E-42 353.0 17.3 207 723-938 20-262 (360)
162 1fvr_A Tyrosine-protein kinase 100.0 1.9E-37 6.6E-42 346.9 17.8 257 738-1019 25-306 (327)
163 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-37 4.8E-42 347.1 16.5 247 743-1007 16-271 (325)
164 3gxj_A TGF-beta receptor type- 100.0 6.5E-39 2.2E-43 354.9 5.7 272 737-1015 2-299 (303)
165 3dls_A PAS domain-containing s 100.0 7E-38 2.4E-42 350.9 14.0 239 736-1007 22-275 (335)
166 2wqm_A Serine/threonine-protei 100.0 2E-37 6.9E-42 344.1 17.4 263 737-1020 31-304 (310)
167 3kk8_A Calcium/calmodulin depe 100.0 2.9E-37 1E-41 338.2 18.4 249 737-1008 5-263 (284)
168 3n9x_A Phosphotransferase; mal 100.0 2.1E-37 7.3E-42 359.6 18.2 197 736-937 24-254 (432)
169 3mtl_A Cell division protein k 100.0 6.4E-38 2.2E-42 350.1 13.0 264 738-1007 2-282 (324)
170 3uc3_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 352.9 15.0 251 736-1008 18-276 (361)
171 3is5_A Calcium-dependent prote 100.0 1E-37 3.6E-42 341.8 14.3 248 737-1007 21-279 (285)
172 4agu_A Cyclin-dependent kinase 100.0 2.2E-37 7.4E-42 344.1 17.0 263 738-1007 3-285 (311)
173 1o6v_A Internalin A; bacterial 100.0 4E-36 1.4E-40 353.2 28.7 348 223-635 43-390 (466)
174 2xir_A Vascular endothelial gr 100.0 7.8E-38 2.7E-42 348.5 13.2 265 729-1015 18-312 (316)
175 2qr7_A Ribosomal protein S6 ki 100.0 6.3E-38 2.1E-42 351.7 12.5 250 737-1009 21-280 (342)
176 3dbq_A Dual specificity protei 100.0 1E-37 3.5E-42 351.4 14.2 248 737-1008 8-275 (343)
177 1p4o_A Insulin-like growth fac 100.0 4E-38 1.4E-42 351.8 10.8 266 732-1020 19-306 (322)
178 3rp9_A Mitogen-activated prote 100.0 2.2E-37 7.4E-42 363.2 17.4 190 737-931 52-280 (458)
179 2i1m_A Macrophage colony-stimu 100.0 7.1E-38 2.4E-42 351.5 12.7 260 734-1015 42-328 (333)
180 2zmd_A Dual specificity protei 100.0 1.6E-37 5.5E-42 355.3 15.8 246 738-1007 56-321 (390)
181 3brb_A Proto-oncogene tyrosine 100.0 2.6E-37 8.8E-42 343.7 16.8 259 735-1016 31-311 (313)
182 4ejn_A RAC-alpha serine/threon 100.0 5.1E-38 1.8E-42 366.8 11.6 245 737-1007 147-405 (446)
183 3g33_A Cell division protein k 100.0 2.6E-37 9.1E-42 342.8 16.7 265 736-1007 7-297 (308)
184 2y7j_A Phosphorylase B kinase 100.0 4.6E-37 1.6E-41 348.6 18.8 251 734-1007 90-360 (365)
185 2h8h_A Proto-oncogene tyrosine 100.0 4.8E-38 1.6E-42 374.4 11.1 254 736-1014 265-524 (535)
186 3pls_A Macrophage-stimulating 100.0 2.7E-37 9.1E-42 341.1 16.1 257 739-1017 22-291 (298)
187 3oz6_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 353.6 17.4 266 735-1007 6-329 (388)
188 2acx_A G protein-coupled recep 100.0 2.3E-37 7.8E-42 364.7 16.5 250 736-1007 182-445 (576)
189 1b6c_B TGF-B superfamily recep 100.0 1.9E-36 6.4E-41 341.4 23.1 272 729-1015 33-338 (342)
190 1nxk_A MAP kinase-activated pr 100.0 3.4E-37 1.2E-41 353.6 17.2 249 737-1008 60-323 (400)
191 2r5t_A Serine/threonine-protei 100.0 8.7E-38 3E-42 353.9 12.1 241 737-1003 37-286 (373)
192 3i6u_A CDS1, serine/threonine- 100.0 2.9E-37 1E-41 356.7 16.1 249 736-1007 133-400 (419)
193 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-36 3.5E-41 346.4 20.3 250 736-1016 63-342 (365)
194 3bz5_A Internalin-J, INLJ; leu 100.0 2.6E-36 8.9E-41 351.8 24.1 359 206-638 22-392 (457)
195 2v62_A Serine/threonine-protei 100.0 1.6E-37 5.3E-42 350.2 13.3 262 737-1013 36-328 (345)
196 3bhy_A Death-associated protei 100.0 6.7E-37 2.3E-41 335.2 17.7 254 738-1014 5-275 (283)
197 1xbb_A Tyrosine-protein kinase 100.0 1.6E-37 5.4E-42 341.6 12.7 257 736-1017 14-283 (291)
198 4eut_A Serine/threonine-protei 100.0 2E-37 6.8E-42 355.9 14.0 274 737-1016 8-312 (396)
199 2clq_A Mitogen-activated prote 100.0 9.4E-37 3.2E-41 336.2 18.7 248 738-1007 22-279 (295)
200 3ttj_A Mitogen-activated prote 100.0 5.7E-37 1.9E-41 358.1 17.9 262 736-1007 60-356 (464)
201 3ll6_A Cyclin G-associated kin 100.0 4.7E-37 1.6E-41 345.5 16.5 256 737-1019 27-314 (337)
202 3mi9_A Cell division protein k 100.0 1.1E-36 3.8E-41 344.4 19.5 266 737-1007 16-312 (351)
203 2jii_A Serine/threonine-protei 100.0 1.4E-37 5E-42 351.6 12.2 266 737-1021 41-344 (352)
204 1t4h_A Serine/threonine-protei 100.0 1.5E-36 5.1E-41 333.6 19.7 245 738-1007 26-283 (290)
205 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-37 4.5E-42 351.8 11.5 251 737-1008 53-323 (355)
206 3lij_A Calcium/calmodulin depe 100.0 4.8E-37 1.6E-41 363.3 16.8 248 737-1007 36-292 (494)
207 3q5i_A Protein kinase; CDPK, m 100.0 9.4E-37 3.2E-41 361.8 19.2 250 736-1008 34-303 (504)
208 2a19_B Interferon-induced, dou 100.0 4.7E-37 1.6E-41 336.5 15.4 248 736-1017 9-278 (284)
209 1byg_A CSK, protein (C-termina 100.0 2.1E-37 7.2E-42 338.2 12.6 248 737-1014 20-274 (278)
210 2yex_A Serine/threonine-protei 100.0 5.7E-37 1.9E-41 334.4 16.0 249 737-1007 6-262 (276)
211 3mwu_A Calmodulin-domain prote 100.0 4.9E-37 1.7E-41 362.7 16.5 248 737-1007 21-277 (486)
212 2vgo_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 335.6 16.2 243 737-1007 13-263 (284)
213 2rku_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 338.5 15.0 246 737-1008 14-267 (294)
214 1cm8_A Phosphorylated MAP kina 100.0 5.8E-37 2E-41 347.8 16.3 260 737-1007 24-308 (367)
215 2j7t_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 345.0 9.9 250 736-1007 17-276 (302)
216 3nyv_A Calmodulin-domain prote 100.0 3.7E-37 1.3E-41 363.9 15.0 249 737-1008 25-283 (484)
217 2jam_A Calcium/calmodulin-depe 100.0 4.1E-37 1.4E-41 340.5 14.4 247 737-1007 8-262 (304)
218 3sv0_A Casein kinase I-like; t 100.0 2.7E-36 9.1E-41 352.2 21.9 261 737-1016 6-281 (483)
219 2owb_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 344.8 14.8 245 737-1007 40-292 (335)
220 2id5_A Lingo-1, leucine rich r 100.0 5.1E-36 1.8E-40 353.9 24.5 347 271-638 15-361 (477)
221 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.7E-37 2.6E-41 359.8 17.3 249 737-1006 184-448 (543)
222 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.6E-37 1.6E-41 343.9 14.6 267 734-1007 30-319 (329)
223 3nsz_A CK II alpha, casein kin 100.0 1E-36 3.5E-41 341.7 17.4 259 737-1007 35-320 (330)
224 3pg1_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 347.3 16.7 272 729-1007 13-317 (362)
225 2yfx_A Tyrosine-protein kinase 100.0 4.2E-37 1.4E-41 344.2 14.2 258 736-1016 28-307 (327)
226 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-36 4.5E-41 336.4 17.5 247 737-1009 21-273 (303)
227 4fl3_A Tyrosine-protein kinase 100.0 6.4E-37 2.2E-41 370.5 16.1 247 744-1015 375-633 (635)
228 3com_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 338.6 17.0 248 736-1007 27-279 (314)
229 4aaa_A Cyclin-dependent kinase 100.0 4.4E-37 1.5E-41 344.6 13.4 264 737-1007 24-307 (331)
230 1ua2_A CAK, cell division prot 100.0 4.4E-37 1.5E-41 346.7 13.4 268 735-1008 7-293 (346)
231 2ycf_A Serine/threonine-protei 100.0 1E-36 3.5E-41 340.3 15.7 247 737-1006 9-274 (322)
232 2h6d_A 5'-AMP-activated protei 100.0 7.6E-37 2.6E-41 333.4 14.3 245 736-1007 9-262 (276)
233 3byv_A Rhoptry kinase; malaria 100.0 1.9E-37 6.5E-42 353.9 9.8 245 737-1015 72-370 (377)
234 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-36 3.8E-41 334.3 15.5 240 737-1007 10-280 (289)
235 3fme_A Dual specificity mitoge 100.0 6.5E-37 2.2E-41 336.6 13.4 248 736-1007 5-267 (290)
236 1u46_A ACK-1, activated CDC42 100.0 3.5E-37 1.2E-41 338.9 11.2 254 737-1013 17-284 (291)
237 1phk_A Phosphorylase kinase; g 100.0 1.7E-36 6E-41 334.5 16.8 249 736-1007 15-284 (298)
238 2j0j_A Focal adhesion kinase 1 100.0 1.2E-36 4.1E-41 369.6 16.6 256 736-1015 388-653 (656)
239 3lm5_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 341.8 13.3 257 729-1007 19-288 (327)
240 3an0_A Dual specificity mitoge 100.0 9.9E-37 3.4E-41 343.2 14.1 248 736-1007 49-311 (340)
241 2i6l_A Mitogen-activated prote 100.0 1.8E-36 6E-41 338.1 15.8 264 737-1007 10-306 (320)
242 2fst_X Mitogen-activated prote 100.0 8.7E-37 3E-41 346.0 13.4 261 736-1007 27-312 (367)
243 2w5a_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 337.3 9.0 249 737-1009 5-270 (279)
244 2vwi_A Serine/threonine-protei 100.0 7.6E-37 2.6E-41 338.3 12.4 260 734-1007 11-288 (303)
245 3qyz_A Mitogen-activated prote 100.0 3.5E-36 1.2E-40 341.9 17.9 265 736-1007 25-314 (364)
246 2pml_X PFPK7, Ser/Thr protein 100.0 1.2E-36 4.2E-41 343.7 14.0 262 737-1007 30-323 (348)
247 3eb0_A Putative uncharacterize 100.0 5.5E-36 1.9E-40 342.6 19.6 269 734-1013 3-330 (383)
248 2wtk_C Serine/threonine-protei 100.0 2.9E-36 1E-40 333.9 16.7 247 737-1008 4-265 (305)
249 3q60_A ROP5B; pseudokinase, tr 100.0 4.5E-37 1.5E-41 350.2 10.2 258 737-1014 61-362 (371)
250 2x7f_A TRAF2 and NCK-interacti 100.0 6.2E-37 2.1E-41 342.8 11.0 252 732-1007 18-287 (326)
251 2xrw_A Mitogen-activated prote 100.0 7.4E-36 2.5E-40 339.8 19.7 262 737-1008 24-320 (371)
252 3pfq_A PKC-B, PKC-beta, protei 100.0 1.8E-36 6.3E-41 369.0 15.6 246 735-1006 338-597 (674)
253 3eqc_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 348.4 9.9 262 737-1008 32-326 (360)
254 1wak_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 346.3 16.7 262 737-1007 36-392 (397)
255 4fcg_A Uncharacterized protein 100.0 4.2E-36 1.5E-40 335.0 16.3 270 2-329 24-314 (328)
256 1zy4_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 331.8 16.0 248 737-1007 5-284 (303)
257 2r3i_A Cell division protein k 100.0 4.7E-36 1.6E-40 331.3 15.9 264 738-1007 3-284 (299)
258 2b9h_A MAP kinase FUS3, mitoge 100.0 6.2E-36 2.1E-40 338.7 17.2 265 736-1007 9-306 (353)
259 3kvw_A DYRK2, dual specificity 100.0 5.5E-36 1.9E-40 346.9 16.8 193 737-938 96-302 (429)
260 4exu_A Mitogen-activated prote 100.0 6E-36 2E-40 340.6 16.1 259 737-1007 41-324 (371)
261 3o6n_A APL1; leucine-rich repe 100.0 4.3E-35 1.5E-39 336.4 22.4 335 290-660 44-378 (390)
262 3rgf_A Cyclin-dependent kinase 100.0 7.1E-36 2.4E-40 344.4 15.8 195 738-938 20-239 (405)
263 2wei_A Calmodulin-domain prote 100.0 7.6E-36 2.6E-40 327.4 15.0 249 736-1007 20-277 (287)
264 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.3E-37 1.8E-41 342.3 5.7 257 735-1016 30-305 (319)
265 4e7w_A Glycogen synthase kinas 100.0 1.1E-35 3.7E-40 340.8 16.7 261 737-1007 39-322 (394)
266 3aln_A Dual specificity mitoge 100.0 7.4E-36 2.5E-40 334.2 14.6 250 737-1007 21-286 (327)
267 1j1b_A Glycogen synthase kinas 100.0 3.1E-35 1.1E-39 339.8 18.9 259 738-1007 54-337 (420)
268 3e3p_A Protein kinase, putativ 100.0 5.4E-35 1.8E-39 331.9 19.6 270 732-1007 17-315 (360)
269 1blx_A Cyclin-dependent kinase 100.0 1.4E-35 4.6E-40 331.9 14.3 265 736-1007 9-297 (326)
270 1z57_A Dual specificity protei 100.0 3.5E-35 1.2E-39 330.5 17.0 259 737-1007 13-329 (339)
271 3cek_A Dual specificity protei 100.0 1.4E-35 4.9E-40 329.6 13.6 252 733-1008 23-294 (313)
272 3fhr_A MAP kinase-activated pr 100.0 1.9E-35 6.5E-40 331.6 14.2 250 736-1008 26-289 (336)
273 3p23_A Serine/threonine-protei 100.0 1.9E-35 6.3E-40 342.0 14.5 245 737-1006 23-283 (432)
274 3a99_A Proto-oncogene serine/t 100.0 7.7E-36 2.6E-40 332.6 10.8 239 735-1007 40-294 (320)
275 3coi_A Mitogen-activated prote 100.0 1.8E-35 6E-40 334.7 13.6 259 737-1007 23-306 (353)
276 2iwi_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 332.1 9.7 241 733-1007 26-284 (312)
277 2rio_A Serine/threonine-protei 100.0 4.1E-35 1.4E-39 340.4 16.0 245 739-1006 16-295 (434)
278 3oja_B Anopheles plasmodium-re 100.0 1.6E-34 5.6E-39 350.0 21.7 334 291-660 51-384 (597)
279 1q8y_A SR protein kinase; tran 100.0 3.3E-35 1.1E-39 335.5 14.6 262 737-1007 18-334 (373)
280 2vx3_A Dual specificity tyrosi 100.0 9.7E-35 3.3E-39 332.1 17.4 196 736-938 52-261 (382)
281 1ogq_A PGIP-2, polygalacturona 100.0 9.9E-35 3.4E-39 322.0 16.9 255 406-662 52-310 (313)
282 2dyl_A Dual specificity mitoge 100.0 3E-35 1E-39 327.9 12.5 248 737-1007 24-284 (318)
283 2eu9_A Dual specificity protei 100.0 1.2E-34 4.1E-39 328.3 16.8 260 737-1007 18-334 (355)
284 3uqc_A Probable conserved tran 100.0 1.5E-34 5E-39 316.0 16.2 234 737-1015 30-267 (286)
285 3o6n_A APL1; leucine-rich repe 100.0 1.2E-33 4E-38 324.4 23.0 313 315-660 44-356 (390)
286 4fmz_A Internalin; leucine ric 100.0 7E-33 2.4E-37 312.8 26.0 305 265-633 42-346 (347)
287 3qa8_A MGC80376 protein; kinas 100.0 1.2E-34 4.2E-39 344.3 11.6 271 737-1013 13-309 (676)
288 3m2w_A MAP kinase-activated pr 100.0 8E-34 2.7E-38 313.2 16.7 232 737-1008 16-258 (299)
289 3oja_B Anopheles plasmodium-re 100.0 3.3E-33 1.1E-37 338.5 23.0 313 315-660 50-362 (597)
290 2pzi_A Probable serine/threoni 100.0 9.1E-34 3.1E-38 348.1 17.4 239 737-1014 79-329 (681)
291 4fmz_A Internalin; leucine ric 100.0 2.4E-32 8E-37 308.5 26.3 303 245-609 39-346 (347)
292 3dzo_A Rhoptry kinase domain; 100.0 4.1E-34 1.4E-38 329.7 9.5 236 738-1007 78-364 (413)
293 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-31 4.1E-36 300.4 23.0 288 292-631 34-331 (332)
294 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-31 1.2E-35 296.7 24.9 267 379-654 54-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 3E-31 1E-35 297.0 24.3 289 292-631 32-330 (330)
296 2vuw_A Serine/threonine-protei 100.0 1.8E-33 6.2E-38 315.9 5.3 241 737-1007 19-332 (336)
297 1xku_A Decorin; proteoglycan, 100.0 1.3E-30 4.5E-35 291.8 26.2 267 379-653 52-329 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 2.1E-34 7.2E-39 338.8 -10.3 315 285-611 50-413 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 7.9E-34 2.7E-38 333.9 -11.0 381 204-616 5-447 (461)
300 4fcg_A Uncharacterized protein 100.0 5.2E-31 1.8E-35 293.8 3.1 283 19-353 26-314 (328)
301 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.3E-34 278.3 15.6 275 382-661 10-292 (306)
302 2z80_A TOLL-like receptor 2, v 100.0 1.7E-29 6E-34 285.4 14.0 257 380-637 53-318 (353)
303 2z80_A TOLL-like receptor 2, v 100.0 2.6E-29 9E-34 284.0 14.2 280 377-660 29-318 (353)
304 3zyj_A Leucine-rich repeat-con 100.0 2.4E-28 8.3E-33 284.7 22.5 252 380-637 44-296 (440)
305 3zyi_A Leucine-rich repeat-con 100.0 2.5E-28 8.5E-33 285.6 22.0 252 380-637 55-307 (452)
306 3g06_A SSPH2 (leucine-rich rep 100.0 4.7E-29 1.6E-33 298.7 16.1 294 22-403 9-308 (622)
307 2z66_A Variable lymphocyte rec 100.0 1.5E-28 5E-33 272.0 18.0 258 379-638 28-292 (306)
308 1ozn_A Reticulon 4 receptor; N 100.0 7.7E-29 2.6E-33 271.2 15.4 251 382-660 14-265 (285)
309 3zyj_A Leucine-rich repeat-con 100.0 3.7E-28 1.3E-32 283.1 21.5 251 406-661 45-297 (440)
310 3zyi_A Leucine-rich repeat-con 100.0 4.8E-28 1.6E-32 283.2 21.2 251 406-661 56-308 (452)
311 1ozn_A Reticulon 4 receptor; N 100.0 6.6E-28 2.3E-32 263.8 17.7 253 342-638 13-266 (285)
312 1wwl_A Monocyte differentiatio 100.0 1.5E-29 5.1E-34 280.4 4.6 266 29-354 24-310 (312)
313 3oja_A Leucine-rich immune mol 99.9 1.2E-29 4.2E-34 298.2 2.6 237 377-628 32-270 (487)
314 1wwl_A Monocyte differentiatio 99.9 6.5E-29 2.2E-33 275.3 7.4 249 375-634 39-310 (312)
315 3ogk_B Coronatine-insensitive 99.9 1.4E-29 4.7E-34 307.7 0.3 433 160-630 64-548 (592)
316 3ogk_B Coronatine-insensitive 99.9 8.2E-30 2.8E-34 309.7 -3.3 456 35-558 41-548 (592)
317 3o53_A Protein LRIM1, AGAP0063 99.9 2.4E-28 8.3E-33 271.3 8.1 247 376-637 31-280 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 8.5E-28 2.9E-32 267.0 8.2 255 295-580 14-270 (317)
319 4azs_A Methyltransferase WBDD; 99.9 6.3E-28 2.2E-32 287.3 5.4 182 746-935 242-438 (569)
320 3g06_A SSPH2 (leucine-rich rep 99.9 1.9E-25 6.6E-30 267.5 24.6 268 268-620 41-308 (622)
321 3oja_A Leucine-rich immune mol 99.9 1.1E-26 3.7E-31 273.1 13.1 243 405-661 35-287 (487)
322 2o6q_A Variable lymphocyte rec 99.9 8.9E-26 3E-30 244.5 17.6 212 32-257 1-212 (270)
323 2z62_A TOLL-like receptor 4, v 99.9 1.4E-25 4.8E-30 244.0 18.5 210 429-639 29-243 (276)
324 2o6q_A Variable lymphocyte rec 99.9 1.7E-24 5.6E-29 234.6 21.3 205 430-637 18-222 (270)
325 2p1m_B Transport inhibitor res 99.9 4.2E-28 1.4E-32 294.8 -8.2 391 224-630 103-541 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 1.2E-24 4E-29 236.7 18.4 226 383-613 11-241 (276)
327 1p9a_G Platelet glycoprotein I 99.9 2.3E-24 7.8E-29 235.5 19.3 204 424-634 6-209 (290)
328 2p1m_B Transport inhibitor res 99.9 1.5E-28 5.1E-33 298.8 -18.4 461 35-560 34-543 (594)
329 1p9a_G Platelet glycoprotein I 99.9 7.5E-24 2.6E-28 231.4 19.5 197 406-609 12-208 (290)
330 3rfs_A Internalin B, repeat mo 99.9 4.1E-24 1.4E-28 231.6 14.7 220 406-638 21-240 (272)
331 3rfs_A Internalin B, repeat mo 99.9 3.1E-24 1.1E-28 232.6 12.2 231 377-621 17-247 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 1.1E-24 3.6E-29 258.2 8.0 181 741-936 339-539 (540)
333 2xwt_C Thyrotropin receptor; s 99.9 4.5E-23 1.5E-27 219.0 15.4 196 429-630 32-236 (239)
334 2xwt_C Thyrotropin receptor; s 99.9 1.2E-22 4.3E-27 215.5 14.6 206 391-607 23-237 (239)
335 3goz_A Leucine-rich repeat-con 99.9 2.7E-24 9.1E-29 243.5 1.8 236 379-634 22-298 (362)
336 4glp_A Monocyte differentiatio 99.9 1.4E-22 4.8E-27 224.1 15.5 202 427-634 90-308 (310)
337 3m19_A Variable lymphocyte rec 99.9 5E-22 1.7E-26 212.5 19.2 179 430-611 16-194 (251)
338 4glp_A Monocyte differentiatio 99.9 6.7E-23 2.3E-27 226.7 12.0 200 406-610 93-308 (310)
339 1h6u_A Internalin H; cell adhe 99.9 2.5E-22 8.7E-27 221.5 15.2 193 426-634 39-231 (308)
340 2ca6_A RAN GTPase-activating p 99.9 2.8E-24 9.6E-29 245.9 -0.9 213 424-636 56-319 (386)
341 3m19_A Variable lymphocyte rec 99.9 9.7E-22 3.3E-26 210.2 18.7 183 452-637 14-196 (251)
342 2ca6_A RAN GTPase-activating p 99.9 3.8E-24 1.3E-28 244.8 -0.9 269 331-628 23-338 (386)
343 3goz_A Leucine-rich repeat-con 99.9 7.1E-24 2.4E-28 240.0 1.1 267 320-617 2-305 (362)
344 2ast_B S-phase kinase-associat 99.9 3.8E-23 1.3E-27 231.8 5.7 251 380-638 48-311 (336)
345 4ay9_X Follicle-stimulating ho 99.9 4.6E-22 1.6E-26 223.9 13.4 245 382-659 12-261 (350)
346 1h6u_A Internalin H; cell adhe 99.9 5.6E-22 1.9E-26 218.8 13.7 215 379-612 19-233 (308)
347 2ast_B S-phase kinase-associat 99.9 1.4E-22 4.9E-27 227.1 5.8 253 293-593 49-314 (336)
348 4ay9_X Follicle-stimulating ho 99.9 2.4E-21 8.2E-26 218.0 14.7 247 336-607 6-257 (350)
349 3cvr_A Invasion plasmid antige 99.8 1.3E-21 4.5E-26 231.3 12.4 212 25-311 33-250 (571)
350 2o6s_A Variable lymphocyte rec 99.8 6.1E-21 2.1E-25 197.8 14.5 186 34-251 5-190 (208)
351 1zar_A RIO2 kinase; serine kin 99.8 2.5E-21 8.7E-26 209.8 9.3 141 731-887 83-241 (282)
352 2o6s_A Variable lymphocyte rec 99.8 3.9E-20 1.3E-24 191.7 16.9 162 429-597 29-190 (208)
353 3cvr_A Invasion plasmid antige 99.8 6.5E-20 2.2E-24 216.8 16.1 168 429-621 81-255 (571)
354 4b8c_D Glucose-repressible alc 99.8 3.2E-21 1.1E-25 236.9 4.6 204 3-249 130-339 (727)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-20 1.4E-24 193.0 9.7 137 501-637 33-170 (220)
356 3e6j_A Variable lymphocyte rec 99.8 2E-19 6.8E-24 189.1 14.5 163 29-241 12-174 (229)
357 2v9t_B SLIT homolog 2 protein 99.8 6.1E-20 2.1E-24 191.7 10.2 136 500-635 32-167 (220)
358 1h6t_A Internalin B; cell adhe 99.8 1.5E-19 5.1E-24 197.4 13.4 187 408-610 28-214 (291)
359 2xot_A Amphoterin-induced prot 99.8 2.7E-19 9.1E-24 202.1 13.4 177 431-634 21-203 (361)
360 1h6t_A Internalin B; cell adhe 99.8 1.6E-19 5.4E-24 197.3 10.2 193 427-635 23-215 (291)
361 1m9s_A Internalin B; cell inva 99.8 5.2E-19 1.8E-23 211.6 14.5 184 426-623 41-224 (605)
362 3e6j_A Variable lymphocyte rec 99.8 1.9E-18 6.6E-23 181.5 15.4 137 500-637 40-176 (229)
363 2xot_A Amphoterin-induced prot 99.8 5.2E-19 1.8E-23 199.8 11.3 176 407-585 21-202 (361)
364 2v9t_B SLIT homolog 2 protein 99.8 1.9E-18 6.6E-23 180.2 14.4 116 495-610 51-166 (220)
365 1m9s_A Internalin B; cell inva 99.8 1E-18 3.6E-23 209.0 13.9 194 378-588 20-213 (605)
366 1dce_A Protein (RAB geranylger 99.8 1.4E-20 4.6E-25 224.1 -2.7 190 118-357 346-550 (567)
367 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-18 9.5E-23 179.0 14.5 157 431-613 14-170 (220)
368 1dce_A Protein (RAB geranylger 99.8 1.2E-20 4.2E-25 224.4 -6.4 217 376-627 346-567 (567)
369 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.9E-23 187.3 8.0 167 406-611 21-187 (263)
370 1xeu_A Internalin C; cellular 99.7 6.6E-18 2.3E-22 181.4 11.1 171 377-587 17-187 (263)
371 1w8a_A SLIT protein; signaling 99.7 4.4E-18 1.5E-22 173.5 9.0 130 479-611 11-141 (192)
372 4ezg_A Putative uncharacterize 99.7 1.2E-17 4.1E-22 171.2 11.7 153 425-609 41-194 (197)
373 4b8c_D Glucose-repressible alc 99.7 4.7E-18 1.6E-22 208.7 8.2 223 379-633 173-404 (727)
374 4ezg_A Putative uncharacterize 99.7 1.4E-17 5E-22 170.5 10.4 154 449-634 41-195 (197)
375 1w8a_A SLIT protein; signaling 99.7 4.9E-17 1.7E-21 165.7 14.0 155 503-660 11-166 (192)
376 1zth_A RIO1 serine protein kin 99.7 1.3E-17 4.5E-22 178.4 9.1 139 738-888 47-219 (258)
377 3sb4_A Hypothetical leucine ri 99.7 1.6E-17 5.5E-22 185.1 8.7 215 406-626 103-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 5.4E-17 1.8E-21 180.8 10.8 100 477-578 227-327 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 1E-16 3.5E-21 163.3 8.6 131 503-637 13-143 (193)
380 2ell_A Acidic leucine-rich nuc 99.6 5.8E-16 2E-20 154.1 10.4 133 500-634 24-161 (168)
381 2ell_A Acidic leucine-rich nuc 99.6 7.2E-16 2.5E-20 153.5 10.4 136 476-614 24-164 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 7.2E-16 2.4E-20 150.1 8.8 129 499-629 16-149 (149)
383 2o6r_A Variable lymphocyte rec 99.6 2.2E-15 7.5E-20 151.3 12.5 132 503-637 10-141 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 1.9E-15 6.6E-20 153.8 12.1 127 52-183 14-140 (193)
385 4fdw_A Leucine rich hypothetic 99.6 8.7E-15 3E-19 166.4 16.7 241 380-632 136-382 (401)
386 4fdw_A Leucine rich hypothetic 99.6 1.9E-14 6.6E-19 163.5 19.1 205 377-609 178-383 (401)
387 2je0_A Acidic leucine-rich nuc 99.6 1.5E-15 5.2E-20 147.7 7.3 128 476-605 17-149 (149)
388 4gyi_A RIO2 kinase; protein ki 99.6 2.7E-16 9.1E-21 174.0 2.0 143 732-888 89-265 (397)
389 2o6r_A Variable lymphocyte rec 99.6 1.1E-14 3.9E-19 146.1 13.0 132 479-613 10-141 (177)
390 1a9n_A U2A', U2A'; complex (nu 99.5 7.1E-15 2.4E-19 147.4 8.1 132 496-633 15-153 (176)
391 4fs7_A Uncharacterized protein 99.5 2.5E-13 8.6E-18 155.1 20.8 319 271-625 75-393 (394)
392 1ds9_A Outer arm dynein; leuci 99.5 2.4E-16 8.1E-21 161.6 -5.5 134 493-633 41-185 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.5 1.8E-14 6E-19 144.5 8.1 129 475-609 18-153 (176)
394 3g39_A Variable lymphocyte rec 99.5 1.2E-13 3.9E-18 137.5 10.6 105 502-609 11-115 (170)
395 1ds9_A Outer arm dynein; leuci 99.5 9.5E-16 3.3E-20 157.1 -5.9 156 424-610 14-186 (198)
396 4fs7_A Uncharacterized protein 99.4 1.5E-12 5.1E-17 148.7 19.5 318 279-630 59-376 (394)
397 2r9u_A Variable lymphocyte rec 99.4 2.7E-13 9.3E-18 135.2 10.8 87 548-634 33-119 (174)
398 3g39_A Variable lymphocyte rec 99.4 8.5E-13 2.9E-17 131.2 11.5 111 525-638 10-120 (170)
399 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4.3E-17 130.4 10.9 106 503-611 15-120 (174)
400 3un9_A NLR family member X1; l 99.3 5.6E-14 1.9E-18 158.2 -5.6 168 427-617 71-260 (372)
401 4gt6_A Cell surface protein; l 99.3 1.4E-10 4.8E-15 132.3 20.8 133 491-630 256-388 (394)
402 3un9_A NLR family member X1; l 99.3 7.6E-14 2.6E-18 157.1 -6.3 185 405-609 73-283 (372)
403 2ifg_A High affinity nerve gro 99.3 1.2E-11 4.2E-16 138.6 11.7 132 504-638 12-146 (347)
404 2ifg_A High affinity nerve gro 99.2 5.3E-12 1.8E-16 141.5 7.7 132 527-661 11-146 (347)
405 4gt6_A Cell surface protein; l 99.2 3.7E-10 1.3E-14 128.7 21.3 309 269-609 66-391 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 2.7E-11 9.3E-16 129.9 10.9 145 735-886 11-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 3.5E-10 1.2E-14 121.1 8.0 137 739-887 21-214 (264)
408 4h09_A Hypothetical leucine ri 99.0 1.7E-08 5.8E-13 114.3 21.3 54 267-324 46-99 (379)
409 4h09_A Hypothetical leucine ri 99.0 3.7E-08 1.3E-12 111.5 23.2 165 424-594 190-354 (379)
410 3rw6_A Nuclear RNA export fact 98.9 4.9E-11 1.7E-15 125.8 -2.6 139 35-175 77-257 (267)
411 2ra8_A Uncharacterized protein 98.8 9.7E-10 3.3E-14 122.4 4.2 184 423-631 134-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.8 4.7E-09 1.6E-13 117.9 9.5 142 742-887 42-248 (359)
413 2ra8_A Uncharacterized protein 98.8 9E-10 3.1E-14 122.6 3.2 169 447-634 134-321 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 9.3E-09 3.2E-13 112.5 8.3 185 743-936 25-288 (304)
415 3rw6_A Nuclear RNA export fact 98.4 1.1E-08 3.7E-13 107.8 -3.0 105 520-626 137-257 (267)
416 3r70_A Aminoglycoside phosphot 98.4 9.5E-07 3.2E-11 97.2 11.1 137 739-888 38-238 (320)
417 1io0_A Tropomodulin; LRR prote 98.3 6.3E-08 2.1E-12 97.2 -0.3 117 492-608 28-163 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 2.5E-08 8.7E-13 100.1 -3.2 116 518-633 30-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 5.8E-06 2E-10 88.5 13.4 135 745-887 31-223 (272)
420 3d1u_A Putative fructosamine-3 98.3 3.4E-06 1.2E-10 90.8 11.5 77 741-821 18-97 (288)
421 3tdw_A Gentamicin resistance p 98.3 5.7E-06 2E-10 90.2 13.4 136 743-887 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.4E-05 4.6E-10 89.3 11.9 142 741-888 44-244 (362)
423 3ats_A Putative uncharacterize 98.0 3.7E-06 1.3E-10 94.1 6.6 79 744-822 26-121 (357)
424 2q83_A YTAA protein; 2635576, 97.8 5.7E-05 2E-09 83.7 10.4 138 744-886 38-251 (346)
425 2olc_A MTR kinase, methylthior 97.8 5.4E-05 1.9E-09 85.8 10.3 75 743-819 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.8 5.2E-06 1.8E-10 80.9 1.1 87 523-609 60-153 (176)
427 3e4g_A ATP synthase subunit S, 97.7 8.4E-06 2.9E-10 79.4 1.2 84 548-631 61-150 (176)
428 3jr1_A Putative fructosamine-3 97.5 0.00036 1.2E-08 75.5 11.6 137 742-883 40-232 (312)
429 3f7w_A Putative fructosamine-3 97.3 0.00048 1.6E-08 74.1 8.9 79 739-821 16-97 (288)
430 2pyw_A Uncharacterized protein 97.2 0.00077 2.6E-08 76.9 10.3 76 856-932 231-313 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00012 4.1E-09 72.7 1.3 41 497-537 38-83 (197)
432 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 63.4 5.8 56 576-633 12-68 (130)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.0024 8.1E-08 69.8 11.5 155 729-886 8-216 (322)
434 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00014 4.9E-09 72.1 0.8 42 426-467 39-85 (197)
435 1zyl_A Hypothetical protein YI 96.9 0.0031 1.1E-07 69.0 11.1 140 744-887 32-223 (328)
436 3csv_A Aminoglycoside phosphot 96.9 0.0041 1.4E-07 68.3 11.3 140 744-888 24-218 (333)
437 3feg_A Choline/ethanolamine ki 96.7 0.0024 8.2E-08 71.0 7.9 139 744-887 56-254 (379)
438 3dxq_A Choline/ethanolamine ki 96.6 0.0018 6E-08 70.1 6.0 128 743-887 23-202 (301)
439 1nw1_A Choline kinase (49.2 KD 96.5 0.0037 1.3E-07 71.1 8.2 72 743-820 78-158 (429)
440 2yle_A Protein spire homolog 1 96.3 0.012 3.9E-07 58.7 8.8 100 819-934 33-135 (229)
441 3rfe_A Platelet glycoprotein I 96.3 0.0048 1.6E-07 57.1 5.7 56 552-609 12-68 (130)
442 3i1a_A Spectinomycin phosphotr 96.2 0.017 5.9E-07 63.4 10.9 66 749-821 34-108 (339)
443 2qg7_A Ethanolamine kinase PV0 96.1 0.013 4.5E-07 66.9 9.8 74 743-821 113-188 (458)
444 3c5i_A Choline kinase; choline 96.1 0.0061 2.1E-07 68.0 6.7 72 744-820 39-120 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.3 0.038 1.3E-06 61.6 8.9 139 744-886 58-279 (401)
446 3mes_A Choline kinase; malaria 94.1 0.11 3.8E-06 58.4 8.9 73 744-821 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 85.2 0.39 1.3E-05 53.8 3.1 30 858-887 245-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 74.0 0.36 1.2E-05 55.1 -2.2 61 741-804 145-214 (463)
449 4ann_A ESSB; membrane protein, 70.5 5 0.00017 39.8 5.4 122 792-943 43-165 (215)
450 2ks1_B Epidermal growth factor 65.3 1 3.5E-05 31.9 -0.5 11 699-709 30-40 (44)
451 4ano_A ESSB; membrane protein, 57.9 21 0.00073 35.4 7.2 114 792-937 48-164 (219)
452 2lz0_A Uncharacterized protein 42.8 28 0.00096 29.7 4.7 16 541-556 36-51 (100)
453 2l2t_A Receptor tyrosine-prote 39.7 7.6 0.00026 27.5 0.5 10 700-709 30-39 (44)
454 2lz0_A Uncharacterized protein 35.6 69 0.0024 27.2 6.1 47 415-462 7-53 (100)
455 2jwa_A Receptor tyrosine-prote 27.9 14 0.00049 26.0 0.3 10 700-709 31-40 (44)
456 3ls8_A Phosphatidylinositol 3- 21.8 9.6E+02 0.033 27.6 14.3 46 834-886 454-501 (614)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.4e-87 Score=833.84 Aligned_cols=641 Identities=32% Similarity=0.490 Sum_probs=491.3
Q ss_pred chhHHHHHHHHHHhccCCCCCcccCCCCCCCCCCceeeEEEcCCCCceEEEeccccccccc---CCccCCCCcCCCeEec
Q 036879 3 VGRDQSALLALKAHVTNDPLNVLASNWSTNTSVCNWFGVTCSPRHRRVTALNLAYMGLLGT---IPPELGNLSFLSLLNV 79 (1029)
Q Consensus 3 ~~~~~~al~~~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~---~p~~~~~l~~L~~L~l 79 (1029)
.+.|++||++||+++. ||. .++| |..++|||+|.||+|+ +++|+.|+|+++++.|. +|+.+++|++|+.+++
T Consensus 10 ~~~~~~all~~k~~~~-~~~-~l~~-W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 10 LYREIHQLISFKDVLP-DKN-LLPD-WSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp HHHHHHHHHHHHTTCS-CTT-SSTT-CCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred CHHHHHHHHHHHhhCC-Ccc-cccC-CCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 5789999999999997 787 8887 9888999999999998 68999999999999998 7765555555555555
Q ss_pred cCcccccCCccccccccCCceeecccccccCCCCCC--cCCCCCccceeccccccccCCCcccc-cCccccCeEeccCCc
Q 036879 80 TNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPP--WLDSFPKLEHLYLDGNSFIGTIPPSI-CNISSLLTLDLSFNQ 156 (1029)
Q Consensus 80 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~ 156 (1029)
+.|.+. .+|..|+++++|++|+|++|.+++ .+|. .++.+++|++|+|++|.+.+.+|..+ .++++|++|||++|+
T Consensus 85 ~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 85 SNSHIN-GSVSGFKCSASLTSLDLSRNSLSG-PVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp TTSCEE-ECCCCCCCCTTCCEEECCSSEEEE-EGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred cCCCcC-CCchhhccCCCCCEEECCCCcCCC-cCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 555543 344455555555555555555543 2344 45555555555555555555444443 455555555555555
Q ss_pred CcccCCcc---ccCCCcCcccccCCCcCcccCCCCCCCCCcccccccc-------------cccchhccccccccCCCCc
Q 036879 157 LQGHVPSS---ILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQY-------------NSLAELHLAYNQLSGQIPS 220 (1029)
Q Consensus 157 l~~~~p~~---~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~-------------~~L~~L~Ls~N~l~~~~p~ 220 (1029)
+++..|.. +.++++|++|++++|++++..+. ..+.+|+.|+++. .+|++|+|++|++++.+|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcccH
Confidence 55444444 44555555555555555543332 2222222222222 2455666677777766677
Q ss_pred ccccccccceEEcccccccCCCCccccccccccceeecccccccc--------cCcccEEEccCCcccCCCCCCcccCCC
Q 036879 221 TLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGE--------IQGLQVLALSSNRLTGVIPPEIINISS 292 (1029)
Q Consensus 221 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 292 (1029)
.+..+++|++|+|++|++++.+|.. .+++|+.|++++|++++. +++|++|+|++|++++.+|..|.++++
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred HHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 7777777777777777776666654 666777777777766521 256777777777777777777777777
Q ss_pred CcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCccccccc-ccceecCCCccccCCCCCCCCCCCCCccccc
Q 036879 293 LTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNAS-MLTLIDMPYNLFSGFIPNSLGFCHPYDELGF 371 (1029)
Q Consensus 293 L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~ 371 (1029)
|++|+|++|.+.+.+|...+..+++|++|+|++|++++.+|..+.+++ +|+.|++++|.+.+.+|..+..
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~--------- 390 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ--------- 390 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTC---------
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhh---------
Confidence 777777777776677766444577777777777777777777777776 7777777777777666654431
Q ss_pred ccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCC
Q 036879 372 LTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRL 451 (1029)
Q Consensus 372 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 451 (1029)
..+++|++|++++|++++.+|..+.++.. |++|++++|++++.+|..|.++++|++|+|++|++++.+|..+..+
T Consensus 391 ----~~~~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 465 (768)
T 3rgz_A 391 ----NPKNTLQELYLQNNGFTGKIPPTLSNCSE-LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465 (768)
T ss_dssp ----STTCCCCEEECCSSEEEEECCGGGGGCTT-CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred ----cccCCccEEECCCCccccccCHHHhcCCC-CCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCC
Confidence 12677889999999988888888888876 8899999999988888888889999999999999988888888888
Q ss_pred CCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEc
Q 036879 452 QKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNL 531 (1029)
Q Consensus 452 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 531 (1029)
++|++|+|++|++++..|..+..+++|++|++++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|+.|++
T Consensus 466 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 545 (768)
T 3rgz_A 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEEC
T ss_pred CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEEC
Confidence 99999999999998888888888999999999999998888989999999999999999998888888889999999999
Q ss_pred cCCcccCcCCcc--------------------------------------------------------------------
Q 036879 532 SSNSLNGTLPVE-------------------------------------------------------------------- 543 (1029)
Q Consensus 532 s~N~l~~~~p~~-------------------------------------------------------------------- 543 (1029)
++|.+++.+|..
T Consensus 546 s~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~ 625 (768)
T 3rgz_A 546 NTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTS 625 (768)
T ss_dssp CSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECC
T ss_pred CCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCc
Confidence 998888766654
Q ss_pred --ccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccc
Q 036879 544 --IGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSL 621 (1029)
Q Consensus 544 --~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 621 (1029)
++.+++|+.|||++|+++|.+|..|+.+++|+.|+|++|+++|.+|..|+++++|++|||++|+++|.+|..+..++.
T Consensus 626 ~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~ 705 (768)
T 3rgz_A 626 PTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705 (768)
T ss_dssp CSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCC
T ss_pred hhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCC
Confidence 344678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCCCCCCCCCCCCc
Q 036879 622 LKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGAPELKFPACKAK 670 (1029)
Q Consensus 622 L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~~~~~~~~~~~ 670 (1029)
|+.|++++|+++|.+|..++|.++...++.|||++||.|. +.|...
T Consensus 706 L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~ 751 (768)
T 3rgz_A 706 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPS 751 (768)
T ss_dssp CSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSC
T ss_pred CCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCC
Confidence 9999999999999999999999999999999999999985 367644
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3e-68 Score=664.67 Aligned_cols=568 Identities=31% Similarity=0.467 Sum_probs=521.8
Q ss_pred CCCeEeccCcccccC---CccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcc--cccCcccc
Q 036879 73 FLSLLNVTNNSFSGT---LPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPP--SICNISSL 147 (1029)
Q Consensus 73 ~L~~L~l~~n~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L 147 (1029)
.++.|+|+++.++|. +|..+.+++.|+.++++.|.+. ++|..++.+++|++|+|++|.++|.+|. .++++++|
T Consensus 51 ~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~--~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L 128 (768)
T 3rgz_A 51 KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN--GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128 (768)
T ss_dssp EEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE--ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTC
T ss_pred cEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC--CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCC
Confidence 577999999999998 9999999999999999999886 5789999999999999999999999998 99999999
Q ss_pred CeEeccCCcCcccCCccc-cCCCcCcccccCCCcCcccCCC----CCCCCCccccccccc------------ccchhccc
Q 036879 148 LTLDLSFNQLQGHVPSSI-LNIPSLLAIDLSNNQFSGPMPS----IYNTSPLQNIDMQYN------------SLAELHLA 210 (1029)
Q Consensus 148 ~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~----~~~~~~l~~l~l~~~------------~L~~L~Ls 210 (1029)
++|+|++|.+++.+|..+ .++++|++|+|++|++++..+. +..+..|+.|+++.| +|++|+|+
T Consensus 129 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls 208 (768)
T 3rgz_A 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVS 208 (768)
T ss_dssp CEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECC
T ss_pred CEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECc
Confidence 999999999998888876 8999999999999999988764 456788999988865 57789999
Q ss_pred cccccCCCCcccccccccceEEcccccccCCCCccccccccccceeeccccccc-----ccCcccEEEccCCcccCCCCC
Q 036879 211 YNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTG-----EIQGLQVLALSSNRLTGVIPP 285 (1029)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-----~l~~L~~L~Ls~N~l~~~~p~ 285 (1029)
+|++++.+|. ++.+++|++|+|++|++++.+|..|+++++|+.|++++|.+++ .+++|++|+|++|++++.+|.
T Consensus 209 ~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~ 287 (768)
T 3rgz_A 209 SNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287 (768)
T ss_dssp SSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCC
T ss_pred CCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCH
Confidence 9999988887 9999999999999999999999999999999999999999985 356899999999999999999
Q ss_pred CcccC-CCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcc-cccccccceecCCCccccCCCCCCCCCC
Q 036879 286 EIINI-SSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSS-ISNASMLTLIDMPYNLFSGFIPNSLGFC 363 (1029)
Q Consensus 286 ~~~~l-~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~ls~N~l~~~~p~~~~~~ 363 (1029)
.+..+ ++|++|+|++|.+.+.+|..+. .+++|++|+|++|++++.+|.. +.++++|++|++++|.+.+.+|..+
T Consensus 288 ~~~~~~~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l--- 363 (768)
T 3rgz_A 288 FLSGACDTLTGLDLSGNHFYGAVPPFFG-SCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL--- 363 (768)
T ss_dssp CSCTTCTTCSEEECCSSEEEECCCGGGG-GCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTH---
T ss_pred HHHhhcCcCCEEECcCCcCCCccchHHh-cCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHH---
Confidence 98875 9999999999999988888876 5999999999999999888866 9999999999999999998887654
Q ss_pred CCCccccccccccccc-ccceeeccCCcCCCCCCccccC--chhhhcceeccccccccccccccCCcCcCcEEEecCccc
Q 036879 364 HPYDELGFLTSLTNCK-DLRKLILSENPLSGVLPISIGN--LSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNEL 440 (1029)
Q Consensus 364 ~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 440 (1029)
..++ +|+.|++++|++++.+|..+.. +.. |++|++++|++++.+|..|.++++|++|+|++|++
T Consensus 364 ------------~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 430 (768)
T 3rgz_A 364 ------------TNLSASLLTLDLSSNNFSGPILPNLCQNPKNT-LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYL 430 (768)
T ss_dssp ------------HHHTTTCSEEECCSSEEEEECCTTTTCSTTCC-CCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEE
T ss_pred ------------HhhhcCCcEEEccCCCcCCCcChhhhhcccCC-ccEEECCCCccccccCHHHhcCCCCCEEECcCCcc
Confidence 3565 8999999999999988888876 554 99999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCc
Q 036879 441 TGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSL 520 (1029)
Q Consensus 441 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 520 (1029)
++.+|..|..+++|++|++++|++++..+..+..+++|++|++++|++++..|..+..+++|++|+|++|++++.+|..+
T Consensus 431 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 510 (768)
T 3rgz_A 431 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510 (768)
T ss_dssp ESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred cCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccc--------------------------------
Q 036879 521 WSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSI-------------------------------- 568 (1029)
Q Consensus 521 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------------------------- 568 (1029)
..+++|+.|+|++|++++.+|..++.+++|+.|++++|++++.+|..+
T Consensus 511 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (768)
T 3rgz_A 511 GRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGA 590 (768)
T ss_dssp GGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSS
T ss_pred hcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999988777644
Q ss_pred --------------------------------------cCcccccccccccccccccCCccccCCCCCCEEeCcCCcccC
Q 036879 569 --------------------------------------GDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 569 --------------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
+.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|
T Consensus 591 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g 670 (768)
T 3rgz_A 591 GNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670 (768)
T ss_dssp EEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred ccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCC
Confidence 335778999999999999999999999999999999999999
Q ss_pred cCchhhhcccccceeeccCCCCcCCCCCC-CCCCccCcccccCCCCCCCCC
Q 036879 611 EIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 611 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.+|..+.++++|+.|||++|+++|.+|.. ..++.+..+++++|+....-|
T Consensus 671 ~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECC
T ss_pred CCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCC
Confidence 99999999999999999999999999864 567788888899887554344
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-62 Score=609.35 Aligned_cols=588 Identities=22% Similarity=0.240 Sum_probs=493.0
Q ss_pred EecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceecccccc
Q 036879 53 LNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNS 132 (1029)
Q Consensus 53 l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 132 (1029)
++.+++++. ++|..+. +++++|+|++|.+++..|..|+++++|++|+|++|+++.+ .|..++.+++|++|+|++|+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKL-EPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCC-CTTHHHHCTTCCEEECCSSC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCcc-CHHHHhcccCcCEEECCCCc
Confidence 455556665 6787765 7889999999999877777899999999999999998864 37778889999999999999
Q ss_pred ccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccc
Q 036879 133 FIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYN 212 (1029)
Q Consensus 133 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N 212 (1029)
+++..+..|+++++|++|+|++|++++..|..|.++++|++|++++|.+++.++..+.. ..+|++|++++|
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~---------l~~L~~L~L~~n 155 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ---------LENLQELLLSNN 155 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC---------CTTCCEEECCSS
T ss_pred cCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcc---------cccCCEEEccCC
Confidence 88544457889999999999999998766788899999999999999988877654421 235777888888
Q ss_pred cccCCCCcccc--cccccceEEcccccccCCCCccccccccccceeeccccccc----------ccCcccEEEccCCccc
Q 036879 213 QLSGQIPSTLF--ECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTG----------EIQGLQVLALSSNRLT 280 (1029)
Q Consensus 213 ~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~----------~l~~L~~L~Ls~N~l~ 280 (1029)
++++..+..+. .+++|++|++++|++++..|..|..+.+|+.|++.++.+.. ..++|+.|+|++|+++
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~ 235 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLS 235 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCC
T ss_pred cccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccc
Confidence 88877777665 45889999999999998888899999999999998888763 2368999999999999
Q ss_pred CCCCCCcccCCC--CcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCC
Q 036879 281 GVIPPEIINISS--LTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPN 358 (1029)
Q Consensus 281 ~~~p~~~~~l~~--L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 358 (1029)
+..|..|.+++. |++|+|++|.+.+..|..+ ..+++|++|+|++|++++..|..|..+++|+.|++++|...+.++.
T Consensus 236 ~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~ 314 (680)
T 1ziw_A 236 TTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSF-AWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISL 314 (680)
T ss_dssp EECTTTTGGGGGSCCCEEECTTSCCCEECTTTT-TTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC----
T ss_pred ccChhHhhccCcCCCCEEECCCCCcCccCcccc-cCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccc
Confidence 999999998865 9999999999985555555 4699999999999999999999999999999999998876543321
Q ss_pred CCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccccccc--ccccccCCc--CcCcEEE
Q 036879 359 SLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKG--SIPSEIGNL--NNLTTLH 434 (1029)
Q Consensus 359 ~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~--~~p~~~~~l--~~L~~L~ 434 (1029)
. .+..+ ....+..+++|++|++++|++++..|..+..+.+ |++|++++|.+.. ..+..|..+ ++|+.|+
T Consensus 315 ~-----~lp~i-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~ 387 (680)
T 1ziw_A 315 A-----SLPKI-DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLIN-LKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 387 (680)
T ss_dssp -------CCEE-CTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTT-CCEEECTTCBSCCCEECTTTTGGGTTSCCCEEE
T ss_pred c-----ccccc-ChhhcccCCCCCEEECCCCccCCCChhHhccccC-CcEEECCCCchhhhhcchhhhcccccCcCceEE
Confidence 0 00000 0013567899999999999999988888998887 9999999998543 333445444 5899999
Q ss_pred ecCccccccccccccCCCCCCEEEeccccccCccc-ccccCCCCCcEEecCCCcccCccccccccccccceeeccCcccc
Q 036879 435 LETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSIT-TDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLT 513 (1029)
Q Consensus 435 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 513 (1029)
|++|++++..|..|..+++|++|+|++|.+.+..+ ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++
T Consensus 388 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 467 (680)
T 1ziw_A 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467 (680)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred CCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence 99999998889999999999999999999986554 78999999999999999999999999999999999999999997
Q ss_pred --CCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCC--------ccccCccccccccccccc
Q 036879 514 --SVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIP--------SSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 514 --~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~ 583 (1029)
+..|..|..+++|+.|++++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+
T Consensus 468 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 547 (680)
T 1ziw_A 468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547 (680)
T ss_dssp CTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSC
T ss_pred ccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCC
Confidence 5688999999999999999999998888889999999999999999986422 247889999999999999
Q ss_pred ccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCCC--CCCccCcccccCCCCCCCCCC
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHGG--PFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
|+...+..|.++++|++|+|++|+|++.++..|.++++|+.|++++|++++.+|... .+.++..+.+.+|||.|+|+.
T Consensus 548 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 548 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 996555679999999999999999998888889999999999999999998776532 467888999999999999974
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.6e-62 Score=600.77 Aligned_cols=578 Identities=22% Similarity=0.225 Sum_probs=500.8
Q ss_pred CceeeEEEcC---------CCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccc
Q 036879 36 CNWFGVTCSP---------RHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSN 106 (1029)
Q Consensus 36 c~w~gv~c~~---------~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 106 (1029)
|.++-|.|+. -..+++.|+|+++++.+..|..++++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 5555667753 2247999999999999766678999999999999999999988999999999999999999
Q ss_pred cccCCCCCC-cCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccC
Q 036879 107 NFSSIEIPP-WLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPM 185 (1029)
Q Consensus 107 ~l~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 185 (1029)
+++. +|+ .|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|.+++.+
T Consensus 84 ~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 84 ELSQ--LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp CCCC--CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred ccCc--cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 9995 555 6999999999999999999777789999999999999999999888999999999999999999998876
Q ss_pred CCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCcccc---ccccccceeeccccc
Q 036879 186 PSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIG---NITMLKGLYLVYTNL 262 (1029)
Q Consensus 186 ~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~n~l 262 (1029)
+..+.. +...+|++|++++|++++..|..|..+.+|+.|++++|.+.+.....+. ..++|+.|++++|.+
T Consensus 162 ~~~~~~-------~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l 234 (680)
T 1ziw_A 162 SEELDI-------FANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQL 234 (680)
T ss_dssp HHHHGG-------GTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCC
T ss_pred HHHhhc-------cccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcc
Confidence 643221 1124788999999999999999999999999999999987643332222 347899999999998
Q ss_pred ccc-------c--CcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCC---
Q 036879 263 TGE-------I--QGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTG--- 330 (1029)
Q Consensus 263 ~~~-------l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~--- 330 (1029)
.+. + ++|++|+|++|++++..|..|.++++|++|+|++|++.+..|..+. .+++|++|++++|...+
T Consensus 235 ~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~~~~~~~~~ 313 (680)
T 1ziw_A 235 STTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLH-GLFNVRYLNLKRSFTKQSIS 313 (680)
T ss_dssp CEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTT-TCTTCCEEECTTCBCCC---
T ss_pred cccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhc-CCCCccEEeccchhhhcccc
Confidence 743 2 3499999999999999999999999999999999999866666655 69999999999987654
Q ss_pred --CCCc----ccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCC--CCCccccCc
Q 036879 331 --PIPS----SISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSG--VLPISIGNL 402 (1029)
Q Consensus 331 --~~p~----~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l 402 (1029)
.+|. .|..+++|+.|++++|.+.+..+..+ ..+++|++|++++|.+.. ..+..+..+
T Consensus 314 ~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---------------~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~ 378 (680)
T 1ziw_A 314 LASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF---------------TGLINLKYLSLSNSFTSLRTLTNETFVSL 378 (680)
T ss_dssp ---CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT---------------TTCTTCCEEECTTCBSCCCEECTTTTGGG
T ss_pred cccccccChhhcccCCCCCEEECCCCccCCCChhHh---------------ccccCCcEEECCCCchhhhhcchhhhccc
Confidence 2333 78899999999999999998766544 478999999999998543 222333333
Q ss_pred h-hhhcceeccccccccccccccCCcCcCcEEEecCcccccccc-ccccCCCCCCEEEeccccccCcccccccCCCCCcE
Q 036879 403 S-NAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIP-KAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSE 480 (1029)
Q Consensus 403 ~-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 480 (1029)
. ..++.|++++|++++..|.+|..+++|++|+|++|++++.+| ..|..+++|++|++++|++.+..+..|..+++|+.
T Consensus 379 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 458 (680)
T 1ziw_A 379 AHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458 (680)
T ss_dssp TTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCE
T ss_pred ccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccccc
Confidence 2 248999999999999999999999999999999999987555 78999999999999999999999999999999999
Q ss_pred EecCCCccc--CccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCC--------ccccccccc
Q 036879 481 FYSDGNELN--GSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLP--------VEIGNLKVV 550 (1029)
Q Consensus 481 L~l~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L 550 (1029)
|++++|.+. +..|..|..+++|++|+|++|+++++.+..|.++++|+.|+|++|++++..+ ..+.++++|
T Consensus 459 L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L 538 (680)
T 1ziw_A 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 538 (680)
T ss_dssp EECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTC
T ss_pred chhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCC
Confidence 999999987 5789999999999999999999999999999999999999999999986432 247899999
Q ss_pred cEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhh-cccccceeeccC
Q 036879 551 TKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLK-ALSLLKFLNLSF 629 (1029)
Q Consensus 551 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~ 629 (1029)
+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..+. .+++|+.|++++
T Consensus 539 ~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~ 618 (680)
T 1ziw_A 539 HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTT
T ss_pred CEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccC
Confidence 9999999999966566799999999999999999977777889999999999999999998888888 899999999999
Q ss_pred CCCcCCCCC
Q 036879 630 NGLQGQVPH 638 (1029)
Q Consensus 630 N~l~~~~~~ 638 (1029)
|++.|.++.
T Consensus 619 N~~~c~c~~ 627 (680)
T 1ziw_A 619 NPFDCTCES 627 (680)
T ss_dssp CCCCBCCCC
T ss_pred CCcccCCcc
Confidence 999998764
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.1e-58 Score=559.04 Aligned_cols=531 Identities=21% Similarity=0.226 Sum_probs=419.8
Q ss_pred ecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccc
Q 036879 54 NLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSF 133 (1029)
Q Consensus 54 ~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 133 (1029)
+.++.++. ++|..+.. .+++|+|++|.+++..|..|+++++|++|+|++|+++.+ .|..|+.+++|++|+|++|++
T Consensus 18 ~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 18 NCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI-HEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp ECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEE-CTTTTTTCTTCCEEECTTCCC
T ss_pred ECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCcccee-ChhhccCccccCeeeCCCCcc
Confidence 44445555 67776653 689999999999988899999999999999999999864 478899999999999999999
Q ss_pred cCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccC-CCCCCCCCcccccccccccchhccccc
Q 036879 134 IGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPM-PSIYNTSPLQNIDMQYNSLAELHLAYN 212 (1029)
Q Consensus 134 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~~~l~~l~l~~~~L~~L~Ls~N 212 (1029)
++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|++++.. +.++.+ .+|++|++++|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l----------~~L~~L~L~~n 163 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPT----------EKLKVLDFQNN 163 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCC----------TTCCEEECCSS
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCC----------cccCEEEcccC
Confidence 9888999999999999999999999766888999999999999999998753 444433 25677788888
Q ss_pred cccCCCCcccccccccc--eEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccC
Q 036879 213 QLSGQIPSTLFECKQLK--ILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINI 290 (1029)
Q Consensus 213 ~l~~~~p~~l~~l~~L~--~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 290 (1029)
++++..|..|+.+++|+ .|++++|++++..|..+.. .+|+.|+ +++|. .++..+.++
T Consensus 164 ~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~-----------------l~~~~---~~~~~~~~l 222 (606)
T 3t6q_A 164 AIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLN-----------------FGGTQ---NLLVIFKGL 222 (606)
T ss_dssp CCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEE-----------------CTTCS---CHHHHHHHT
T ss_pred cccccChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccc-----------------cCCch---hHHHHhhhc
Confidence 88877788888888888 8889999888777666544 3455444 44443 122233333
Q ss_pred CCCcEEEccCcccC----CCCCchhhhccc--ccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCC
Q 036879 291 SSLTVLSLTANNLL----GNLPSNIGHSLP--NLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCH 364 (1029)
Q Consensus 291 ~~L~~L~Ls~N~l~----~~lp~~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 364 (1029)
.++....+..+.+. ..++...+..+. +|+.|++++|++++..+..|..+++|+.|++++|.++ .+|..
T Consensus 223 ~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~----- 296 (606)
T 3t6q_A 223 KNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSG----- 296 (606)
T ss_dssp TTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSS-----
T ss_pred cccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChh-----
Confidence 33333322222111 123333333333 6888888888888877777888888888888888876 44443
Q ss_pred CCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccccccccccc-ccCCcCcCcEEEecCcccccc
Q 036879 365 PYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPS-EIGNLNNLTTLHLETNELTGS 443 (1029)
Q Consensus 365 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~ 443 (1029)
+..+++|++|++++|++.+..|..+..++. |++|++++|.+.+.+|. .|.++++|++|++++|.+++.
T Consensus 297 ----------l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 365 (606)
T 3t6q_A 297 ----------LVGLSTLKKLVLSANKFENLCQISASNFPS-LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETS 365 (606)
T ss_dssp ----------CCSCTTCCEEECTTCCCSBGGGGCGGGCTT-CSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEE
T ss_pred ----------hcccccCCEEECccCCcCcCchhhhhccCc-CCEEECCCCCcccccchhhhhccCcCCEEECCCCccccc
Confidence 346778888888888888777777777776 88888888888755554 488888899999999988865
Q ss_pred c--cccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccc-ccccccccceeeccCccccCCCCCCc
Q 036879 444 I--PKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQ-CLDSLISLRTLSLGFNRLTSVIPSSL 520 (1029)
Q Consensus 444 ~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~ 520 (1029)
. +..+..+++|++|++++|++.+..+..|..+++|++|++++|++.+..+. .+..+++|++|++++|.+++..|..+
T Consensus 366 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 445 (606)
T 3t6q_A 366 DCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445 (606)
T ss_dssp EESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTT
T ss_pred cCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHH
Confidence 5 67788888899999999988888888888888888888888888876554 48888999999999999988888888
Q ss_pred cCCCCCcEEEccCCcccCc---CCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCC
Q 036879 521 WSLRDILNVNLSSNSLNGT---LPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTS 597 (1029)
Q Consensus 521 ~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 597 (1029)
..+++|+.|++++|.+++. .+..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..|..+..+++
T Consensus 446 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 8899999999999988762 3356888899999999999998888888899999999999999999888888999999
Q ss_pred CCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 598 LNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 598 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
| +|+|++|++++.+|..+..+++|+.|++++|++.|.++
T Consensus 526 L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 526 I-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp C-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred c-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9 99999999998888888888999999998888887555
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.9e-58 Score=560.23 Aligned_cols=512 Identities=18% Similarity=0.257 Sum_probs=284.6
Q ss_pred hhHHHHHHHHHHhccCCCCCccc------CCCCCCCCCCce---eeEEEcCCCCceEEEecccccccccCCccCCCCcCC
Q 036879 4 GRDQSALLALKAHVTNDPLNVLA------SNWSTNTSVCNW---FGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFL 74 (1029)
Q Consensus 4 ~~~~~al~~~~~~~~~~~~~~~~------~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L 74 (1029)
..|+.||.+||.++..+++..-+ .+|+.++|||.| .||+|+.. +||+.|+|+++++.|.+|+++++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccc
Confidence 47999999999998654443222 249999999999 99999865 899999999999999999999999999
Q ss_pred CeEeccCccc------cc------CCccccccccCCceeecccccccCCCCCCcCCC-CCccceeccccccccCCCcccc
Q 036879 75 SLLNVTNNSF------SG------TLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDS-FPKLEHLYLDGNSFIGTIPPSI 141 (1029)
Q Consensus 75 ~~L~l~~n~l------~~------~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~ 141 (1029)
++|+|++|.+ .| .+|... +..|+ +++++|.+.. ..|..+.. +..+..+++....+..
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~-~~~~~~~~~~~~l~~~~l~~~~~~~------ 177 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDY-DPREDFSDLIKDCINSDPQQKSIKK------ 177 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCC-CGGGGSCHHHHHHHHHCTTSCCCCC------
T ss_pred eEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhcc-CchhhHHHHHHHHhhcCcccccccc------
Confidence 9999999987 33 445444 56666 7777777665 33444432 2233333433222210
Q ss_pred cCccccCeEec--cCCcCcccCCccccCCCcCcccccCCCcCccc-CCCCCCCCCcccccccccccchhccccccccCCC
Q 036879 142 CNISSLLTLDL--SFNQLQGHVPSSILNIPSLLAIDLSNNQFSGP-MPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQI 218 (1029)
Q Consensus 142 ~~l~~L~~L~L--s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~ 218 (1029)
.....++.+.+ ..|++++ +|..++++++|++|+|++|++++. ++..+.. -+.+...+.+
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~-----------------~~~~~~~~~i 239 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN-----------------ENSEYAQQYK 239 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC-----------------TTSHHHHHHT
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc-----------------cccchhcccC
Confidence 01112222222 2456665 566666666666666666666652 1100000 0001111224
Q ss_pred Ccccc--cccccceEEcccccccCCCCccccccccccceeecccc-ccc--------------ccCcccEEEccCCcccC
Q 036879 219 PSTLF--ECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTN-LTG--------------EIQGLQVLALSSNRLTG 281 (1029)
Q Consensus 219 p~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~~--------------~l~~L~~L~Ls~N~l~~ 281 (1029)
|+.++ ++++|++|+|++|++.+.+|..|+++++|+.|++++|+ +++ .+++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~- 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK- 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-
Confidence 44444 44445555555554444444444444433311111111 100 1123445555555555
Q ss_pred CCCC--CcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCC
Q 036879 282 VIPP--EIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNS 359 (1029)
Q Consensus 282 ~~p~--~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 359 (1029)
.+|. .+.++++|++|+|++|.+.|.+| .+. .+++|++|+|++|+++ .+|..+..+++
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~-~l~~L~~L~L~~N~l~-~lp~~l~~l~~------------------ 377 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG-SEIKLASLNLAYNQIT-EIPANFCGFTE------------------ 377 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE-EEEEESEEECCSSEEE-ECCTTSEEECT------------------
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhC-CCCCCCEEECCCCccc-cccHhhhhhcc------------------
Confidence 4444 45555555555555555544555 222 3455555555555554 34444444444
Q ss_pred CCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCch-hhhcceeccccccccccccccC-------CcCcCc
Q 036879 360 LGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLS-NAMDVLYLSACNIKGSIPSEIG-------NLNNLT 431 (1029)
Q Consensus 360 ~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~L~~n~l~~~~p~~~~-------~l~~L~ 431 (1029)
+|++|++++|+++ .+|..+.... ..|++|++++|++++.+|..|. .+++|+
T Consensus 378 --------------------~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~ 436 (636)
T 4eco_A 378 --------------------QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVS 436 (636)
T ss_dssp --------------------TCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEE
T ss_pred --------------------cCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCC
Confidence 0555555555554 4444443322 0255555555555555555555 566788
Q ss_pred EEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCcc
Q 036879 432 TLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNR 511 (1029)
Q Consensus 432 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (1029)
+|+|++|++++..+..+..+++|++|+|++|+++......+.... ..+.++++|++|+|++|+
T Consensus 437 ~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~-----------------~~~~~l~~L~~L~Ls~N~ 499 (636)
T 4eco_A 437 SINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN-----------------ENFKNTYLLTSIDLRFNK 499 (636)
T ss_dssp EEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT-----------------EECTTGGGCCEEECCSSC
T ss_pred EEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc-----------------ccccccCCccEEECcCCc
Confidence 888888888754444455678888888888887743333332211 112334467777777777
Q ss_pred ccCCCCCCcc--CCCCCcEEEccCCcccCcCCccccccccccEEEccCCc------CCCCCCccccCccccccccccccc
Q 036879 512 LTSVIPSSLW--SLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRND------LSGEIPSSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 512 l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~~L~~L~L~~N~ 583 (1029)
++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+ +.+.+|..+..+++|+.|+|++|+
T Consensus 500 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 577 (636)
T 4eco_A 500 LT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSND 577 (636)
T ss_dssp CC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred CC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCc
Confidence 76 3555554 67777777777777775 67777777777777775544 444444444444444444444444
Q ss_pred ccccCCccccCCCCCCEEeCcCCccc
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
|+ .+|..+. ++|++|||++|+++
T Consensus 578 l~-~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 578 IR-KVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CC-BCCSCCC--TTCCEEECCSCTTC
T ss_pred CC-ccCHhHh--CcCCEEECcCCCCc
Confidence 42 3443333 34444444444443
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.1e-56 Score=542.03 Aligned_cols=535 Identities=20% Similarity=0.210 Sum_probs=456.2
Q ss_pred eEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCC
Q 036879 76 LLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFN 155 (1029)
Q Consensus 76 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 155 (1029)
.++.++..++ .+|..+.. ++++|+|++|+++.+. |..|+.+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 6888888888 78877754 7999999999999743 778999999999999999999888999999999999999999
Q ss_pred cCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEccc
Q 036879 156 QLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSV 235 (1029)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 235 (1029)
++++..|..|.++++|++|++++|++++..+..+.. ..+|++|+|++|++++..+..+..+++|++|++++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~---------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 162 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHN---------QKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQN 162 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTT---------CTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCS
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhcc---------CCcccEEECCCCcccccCcccccCCcccCEEEccc
Confidence 999888999999999999999999999865433321 23577888888888875545555699999999999
Q ss_pred ccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcc
Q 036879 236 NNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSL 315 (1029)
Q Consensus 236 N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l 315 (1029)
|++++..|..|+.+++|+.+ .|++++|++++..|..+.. .+|++|++++|. .++..+. .+
T Consensus 163 n~l~~~~~~~~~~l~~L~~l---------------~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~-~l 222 (606)
T 3t6q_A 163 NAIHYLSKEDMSSLQQATNL---------------SLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFK-GL 222 (606)
T ss_dssp SCCCEECHHHHHTTTTCCSE---------------EEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHH-HT
T ss_pred CcccccChhhhhhhccccee---------------EEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhh-hc
Confidence 99988778888887766632 5788899998777776654 689999999986 2343332 35
Q ss_pred cccceEeecCcccC-----CCCCccccccc--ccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccC
Q 036879 316 PNLQQLILGGNRLT-----GPIPSSISNAS--MLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSE 388 (1029)
Q Consensus 316 ~~L~~L~L~~N~l~-----~~~p~~l~~l~--~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 388 (1029)
.++....+.-+.+. ...+..+..+. .|+.|++++|.+.+..+..+ ..+++|++|++++
T Consensus 223 ~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~---------------~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 223 KNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTF---------------HCFSGLQELDLTA 287 (606)
T ss_dssp TTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTT---------------TTCTTCSEEECTT
T ss_pred cccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHh---------------ccccCCCEEeccC
Confidence 55544444333222 23344455554 79999999999987666544 4789999999999
Q ss_pred CcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccccc-ccccCCCCCCEEEeccccccCc
Q 036879 389 NPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIP-KAIGRLQKLQGLYLQHNKLQGS 467 (1029)
Q Consensus 389 N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 467 (1029)
|+++ .+|..+..+.. |++|++++|.+++..|..+.++++|++|++++|.+.+.+| ..+..+++|++|++++|.+++.
T Consensus 288 n~l~-~lp~~l~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 365 (606)
T 3t6q_A 288 THLS-ELPSGLVGLST-LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETS 365 (606)
T ss_dssp SCCS-CCCSSCCSCTT-CCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEE
T ss_pred CccC-CCChhhccccc-CCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccc
Confidence 9998 78888988887 9999999999998889999999999999999999986555 4589999999999999999887
Q ss_pred c--cccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCC-CccCCCCCcEEEccCCcccCcCCccc
Q 036879 468 I--TTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPS-SLWSLRDILNVNLSSNSLNGTLPVEI 544 (1029)
Q Consensus 468 ~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~ 544 (1029)
. +..+..+++|++|++++|++.+..|..|..+++|++|++++|++++..+. .+..+++|+.|++++|.+++..|..+
T Consensus 366 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 445 (606)
T 3t6q_A 366 DCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445 (606)
T ss_dssp EESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTT
T ss_pred cCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHH
Confidence 7 77899999999999999999999999999999999999999999987655 48999999999999999999899999
Q ss_pred cccccccEEEccCCcCCCC---CCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccc
Q 036879 545 GNLKVVTKIDLSRNDLSGE---IPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSL 621 (1029)
Q Consensus 545 ~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 621 (1029)
+.+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+.+++.
T Consensus 446 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 9999999999999999863 3367899999999999999999988999999999999999999999999999999999
Q ss_pred cceeeccCCCCcCCCCCC-CCCCccCcccccCCCCCCCCCC
Q 036879 622 LKFLNLSFNGLQGQVPHG-GPFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 622 L~~L~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
| .|++++|++++.+|.. ..+..++.+.+.+|||.|+|+.
T Consensus 526 L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 526 I-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp C-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred c-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9 9999999999877763 4567888999999999998864
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-55 Score=555.69 Aligned_cols=528 Identities=21% Similarity=0.199 Sum_probs=349.0
Q ss_pred ecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCC-CCcCCCCCccceecccccc
Q 036879 54 NLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEI-PPWLDSFPKLEHLYLDGNS 132 (1029)
Q Consensus 54 ~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-p~~~~~l~~L~~L~Ls~N~ 132 (1029)
+.+++++. .+|. ..++|++|||++|.|++..|..|.++++|++|+|++|.+.. .+ |..|+.+++|++|+|++|+
T Consensus 10 dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~-~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 10 FYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPL-TIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCC-EECTTTTSSCTTCCEEECTTCC
T ss_pred EccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCcc-ccCHHHhcCCCCCCEEECCCCc
Confidence 44455665 6776 45788899999999988888889999999999999986543 33 6778889999999999999
Q ss_pred ccCCCcccccCccccCeEeccCCcCcccCCcc--ccCCCcCcccccCCCcCcccCCC--CCCCCCcccccccccccchhc
Q 036879 133 FIGTIPPSICNISSLLTLDLSFNQLQGHVPSS--ILNIPSLLAIDLSNNQFSGPMPS--IYNTSPLQNIDMQYNSLAELH 208 (1029)
Q Consensus 133 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~ls~N~l~~~~~~--~~~~~~l~~l~l~~~~L~~L~ 208 (1029)
+++..|..|+++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..+. +..+ .+|++|+
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L----------~~L~~L~ 154 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKL----------NSLKSID 154 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTC----------SSCCEEE
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhC----------CCCCEEE
Confidence 88877888999999999999999988766665 88888888888888888765432 1222 2455666
Q ss_pred cccccccCCCCcccccc--cccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCC
Q 036879 209 LAYNQLSGQIPSTLFEC--KQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPE 286 (1029)
Q Consensus 209 Ls~N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~ 286 (1029)
|++|++++..|..+..+ ++|+.|++++|.+.+..|..++.+.+.- ....|+.|+|++|++++..|..
T Consensus 155 Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~-----------~~~~L~~L~Ls~n~l~~~~~~~ 223 (844)
T 3j0a_A 155 FSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPF-----------RNMVLEILDVSGNGWTVDITGN 223 (844)
T ss_dssp EESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTT-----------TTCCBSEEBCSSCCSSTTTTSG
T ss_pred CCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCcc-----------ccCceeEEecCCCcCchhHHHH
Confidence 66666666666777666 6777777777777776666665544210 0113678888888888777777
Q ss_pred cccC---CCCcEEEccCcccCC--------CCCchhhhcc--cccceEeecCcccCCCCCcccccccccceecCCCcccc
Q 036879 287 IINI---SSLTVLSLTANNLLG--------NLPSNIGHSL--PNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFS 353 (1029)
Q Consensus 287 ~~~l---~~L~~L~Ls~N~l~~--------~lp~~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 353 (1029)
+... .+++.|+++.+.+.. ......+.++ ++|+.|+|++|.+.+..|..|..+++|+.|++++|.+.
T Consensus 224 ~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 303 (844)
T 3j0a_A 224 FSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN 303 (844)
T ss_dssp GGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCC
T ss_pred HHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCC
Confidence 6643 567778776433211 1111112222 56777777777777777777777777777777777776
Q ss_pred CCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEE
Q 036879 354 GFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTL 433 (1029)
Q Consensus 354 ~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 433 (1029)
+..|..+ ..+++|++|+|++|++++..|..+..+++ |++|++++|++++..+..|.++++|++|
T Consensus 304 ~~~~~~~---------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 304 KIADEAF---------------YGLDNLQVLNLSYNLLGELYSSNFYGLPK-VAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp EECTTTT---------------TTCSSCCEEEEESCCCSCCCSCSCSSCTT-CCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred CCChHHh---------------cCCCCCCEEECCCCCCCccCHHHhcCCCC-CCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 6555433 35667777777777777666666766665 7777777777776666667777777777
Q ss_pred EecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcc-ccccccccccceeeccCccc
Q 036879 434 HLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSL-PQCLDSLISLRTLSLGFNRL 512 (1029)
Q Consensus 434 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l 512 (1029)
+|++|.+++ ++ .+++|+.|++++|+++..... ..+++.|++++|++.+.. +..+..+++|++|+|++|++
T Consensus 368 ~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~~l~~~----~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l 438 (844)
T 3j0a_A 368 DLRDNALTT-IH----FIPSIPDIFLSGNKLVTLPKI----NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRF 438 (844)
T ss_dssp EEETCCSCC-CS----SCCSCSEEEEESCCCCCCCCC----CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCC
T ss_pred ECCCCCCCc-cc----CCCCcchhccCCCCccccccc----ccccceeecccCccccCchhhhhhcCCccceeeCCCCcc
Confidence 777777763 22 256677777777777633221 345666667766666432 22244666666666666666
Q ss_pred cCCCCC-CccCCCCCcEEEccCCccc-----CcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccc
Q 036879 513 TSVIPS-SLWSLRDILNVNLSSNSLN-----GTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQG 586 (1029)
Q Consensus 513 ~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 586 (1029)
++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++
T Consensus 439 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 518 (844)
T 3j0a_A 439 SSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV 518 (844)
T ss_dssp CCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSS
T ss_pred cccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCc
Confidence 654333 3445666666666666665 2333445666666666666666666666666666666666666666665
Q ss_pred cCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 587 SIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 587 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
..|..+. ++|+.|||++|+|++.+|..| .+|+.|++++|++.|.++
T Consensus 519 l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 519 LSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECE 564 (844)
T ss_dssp CCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSS
T ss_pred cChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccc
Confidence 5544444 566666666666666665543 355666666666666554
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6e-56 Score=541.41 Aligned_cols=525 Identities=19% Similarity=0.185 Sum_probs=380.2
Q ss_pred EEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccc
Q 036879 52 ALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGN 131 (1029)
Q Consensus 52 ~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N 131 (1029)
.++.+++++. .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|+++.+. |..|+.+++|++|+|++|
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~-~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIE-DKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC-TTTTTTCTTCCEEECTTC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccC-HHHhhchhhcCEeECCCC
Confidence 3566666776 7888765 78999999999999888889999999999999999998643 678899999999999999
Q ss_pred cccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhcccc
Q 036879 132 SFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAY 211 (1029)
Q Consensus 132 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~ 211 (1029)
++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++.
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--------------------------- 143 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSC--------------------------- 143 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCC---------------------------
T ss_pred cccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccce---------------------------
Confidence 99987788999999999999999999876668899999999998888887641
Q ss_pred ccccCCCCcccccccccceEEcccccccCCCCcccccccccc----ceeecccccccc------cCcccEEEccCCccc-
Q 036879 212 NQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLK----GLYLVYTNLTGE------IQGLQVLALSSNRLT- 280 (1029)
Q Consensus 212 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~n~l~~~------l~~L~~L~Ls~N~l~- 280 (1029)
.+|..|+++++|++|+|++|++++..|..|+.+.+|+ .|++++|.+++. ..+|+.|+|++|.++
T Consensus 144 -----~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 144 -----KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSS 218 (606)
T ss_dssp -----CCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCH
T ss_pred -----echHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccch
Confidence 1244444455555555555555544444444444433 233333333210 114567777777765
Q ss_pred CCCCCCcccCCCCcEEEccCcccCC-----CCCchhhhccc--ccceEee-cCcccCCCCCcccccccccceecCCCccc
Q 036879 281 GVIPPEIINISSLTVLSLTANNLLG-----NLPSNIGHSLP--NLQQLIL-GGNRLTGPIPSSISNASMLTLIDMPYNLF 352 (1029)
Q Consensus 281 ~~~p~~~~~l~~L~~L~Ls~N~l~~-----~lp~~~~~~l~--~L~~L~L-~~N~l~~~~p~~l~~l~~L~~L~ls~N~l 352 (1029)
+..|..+.++++|+.+++..+.+.+ .++...+..+. .++.+++ ..|.+.+.+|. +..+++|+.|++++|.+
T Consensus 219 ~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~ 297 (606)
T 3vq2_A 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSI 297 (606)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCC
T ss_pred hHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccc
Confidence 3556677777777777776554431 12222222222 3555556 66777777776 78888888888888877
Q ss_pred cCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcE
Q 036879 353 SGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTT 432 (1029)
Q Consensus 353 ~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 432 (1029)
.. +| . +..+++|++|++++|++ +.+| .+ .++. |+.|++++|...+.. .+..+++|++
T Consensus 298 ~~-l~-~---------------l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~-L~~L~l~~n~~~~~~--~~~~l~~L~~ 354 (606)
T 3vq2_A 298 KY-LE-D---------------VPKHFKWQSLSIIRCQL-KQFP-TL-DLPF-LKSLTLTMNKGSISF--KKVALPSLSY 354 (606)
T ss_dssp CC-CC-C---------------CCTTCCCSEEEEESCCC-SSCC-CC-CCSS-CCEEEEESCSSCEEC--CCCCCTTCCE
T ss_pred hh-hh-h---------------ccccccCCEEEcccccC-cccc-cC-CCCc-cceeeccCCcCccch--hhccCCCCCE
Confidence 53 22 1 34667788888888888 4666 34 5554 788888888554333 5667788888
Q ss_pred EEecCcccccc--ccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccc-cccccccccceeeccC
Q 036879 433 LHLETNELTGS--IPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLP-QCLDSLISLRTLSLGF 509 (1029)
Q Consensus 433 L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~ 509 (1029)
|+|++|++++. .|..+..+++|++|++++|.+++. +..|..+++|+.|++++|++.+..| ..+..+++|++|++++
T Consensus 355 L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 433 (606)
T 3vq2_A 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433 (606)
T ss_dssp EECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTT
T ss_pred EECcCCccCCCcchhhhhccCCcccEeECCCCccccc-hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcC
Confidence 88888888754 267777888888888888887653 4677778888888888888877766 6777888888888888
Q ss_pred ccccCCCCCCccCCCCCcEEEccCCcccC-cCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccC
Q 036879 510 NRLTSVIPSSLWSLRDILNVNLSSNSLNG-TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSI 588 (1029)
Q Consensus 510 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 588 (1029)
|++++..|..+..+++|+.|++++|++++ ..|..++.+++|+.|+|++|++++..|..|..+++|+.|+|++|++++.+
T Consensus 434 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 513 (606)
T 3vq2_A 434 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513 (606)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEE
T ss_pred CCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcC
Confidence 88887777788888888888888888876 46777788888888888888888777777888888888888888888777
Q ss_pred CccccCCCCCCEEeCcCCcccCcCchhhhccc-ccceeeccCCCCcCCCCC
Q 036879 589 PDSLGGLTSLNFLDMSSNNLSGEIPNSLKALS-LLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 589 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~ 638 (1029)
|..|..+++|++|+|++|+|+ .+|..+..++ +|+.|++++|++.|.++.
T Consensus 514 ~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 514 SSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp GGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred HHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 778888888888888888887 5555577776 488888888888776654
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-55 Score=545.37 Aligned_cols=533 Identities=19% Similarity=0.223 Sum_probs=302.5
Q ss_pred chhHHHHHHHHHHhccCCCCCcccCCCCCCC-----CC--Cce------------eeEEEcCCCCceEEEeccccccccc
Q 036879 3 VGRDQSALLALKAHVTNDPLNVLASNWSTNT-----SV--CNW------------FGVTCSPRHRRVTALNLAYMGLLGT 63 (1029)
Q Consensus 3 ~~~~~~al~~~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~~~ 63 (1029)
...|++||++||+++. +| + |+.+. +| |+| .||+|+. .+||+.|+|+++++.|.
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~-W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----N-WRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----G-CCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----C-CCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCc
Confidence 3579999999999995 55 3 75443 55 999 9999987 68999999999999999
Q ss_pred CCccCCCCcCCCeEec-cCcccccCCccccccc----c-----CCceeecc-------ccccc----------CCCCCCc
Q 036879 64 IPPELGNLSFLSLLNV-TNNSFSGTLPIQLSNL----R-----RLKYLSFR-------SNNFS----------SIEIPPW 116 (1029)
Q Consensus 64 ~p~~~~~l~~L~~L~l-~~n~l~~~~p~~~~~l----~-----~L~~L~l~-------~N~l~----------~~~~p~~ 116 (1029)
+|+++++|++|+.|+| ++|.++|..|...... . .++...+. ...+. ....+..
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 9999998755332111 0 00000000 00000 0000111
Q ss_pred CCCCCccceecccc--ccccCCCcccccCccccCeEeccCCcCcc-cCCccccCCCcCcccccCCCcCcccCCCCCCCCC
Q 036879 117 LDSFPKLEHLYLDG--NSFIGTIPPSICNISSLLTLDLSFNQLQG-HVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSP 193 (1029)
Q Consensus 117 ~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~ 193 (1029)
......++.+.+.. |++++ +|+.|+++++|++|+|++|++++ .+|..+. ..+.|.+++.+|..+....
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DANSDYAKQYENEELSWSN 489 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTTSHHHHHHTTSCCCGGG
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccccccccccCChhhhhcc
Confidence 12233444444443 66665 66666666666666666666664 1211110 0111222222221110000
Q ss_pred cccccccccccchhccccccccCCCCcccccccccceEEccccc-ccC-CCCccccccc-cccceeecccccccccCccc
Q 036879 194 LQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNN-FIG-SIPREIGNIT-MLKGLYLVYTNLTGEIQGLQ 270 (1029)
Q Consensus 194 l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-~L~~L~l~~n~l~~~l~~L~ 270 (1029)
..+|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ .+ ..+++|+
T Consensus 490 -------L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~-----------~~l~~L~ 551 (876)
T 4ecn_A 490 -------LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDE-----------DTGPKIQ 551 (876)
T ss_dssp -------CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCT-----------TTTTTCC
T ss_pred -------CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcc-----------cccCCcc
Confidence 0122333333333334445555555555555555554 544 4555444433 11 1223455
Q ss_pred EEEccCCcccCCCCC--CcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccc-cceecC
Q 036879 271 VLALSSNRLTGVIPP--EIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASM-LTLIDM 347 (1029)
Q Consensus 271 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~l 347 (1029)
.|+|++|+++ .+|. .+.++++|++|+|++|.+. .+| .+ ..+++|+.|+|++|+++ .+|..+..+++ |+.|++
T Consensus 552 ~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~-~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~L 626 (876)
T 4ecn_A 552 IFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF-GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGF 626 (876)
T ss_dssp EEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC-CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEEC
T ss_pred EEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hh-cCCCcceEEECcCCccc-cchHHHhhccccCCEEEC
Confidence 6666666666 5555 6666666666666666665 566 33 24666666666666666 55555665555 666666
Q ss_pred CCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccC--
Q 036879 348 PYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIG-- 425 (1029)
Q Consensus 348 s~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~-- 425 (1029)
++|.+. .+|..+.. ...++|+.|+|++|++.+.+|... ..+.
T Consensus 627 s~N~L~-~lp~~~~~-------------~~~~~L~~L~Ls~N~l~g~ip~l~----------------------~~l~~~ 670 (876)
T 4ecn_A 627 SHNKLK-YIPNIFNA-------------KSVYVMGSVDFSYNKIGSEGRNIS----------------------CSMDDY 670 (876)
T ss_dssp CSSCCC-SCCSCCCT-------------TCSSCEEEEECCSSCTTTTSSSCS----------------------SCTTTC
T ss_pred cCCCCC-cCchhhhc-------------cccCCCCEEECcCCcCCCccccch----------------------hhhccc
Confidence 655555 33433210 011235555555555544332111 1111
Q ss_pred CcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccccccccccccee
Q 036879 426 NLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTL 505 (1029)
Q Consensus 426 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 505 (1029)
.+++|+.|+|++|+|+...+..+..+++|+.|+|++|+++..+...+.... ..+.++++|+.|
T Consensus 671 ~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~-----------------~~l~nl~~L~~L 733 (876)
T 4ecn_A 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKD-----------------GNYKNTYLLTTI 733 (876)
T ss_dssp CCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTT-----------------SCCTTGGGCCEE
T ss_pred cCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccc-----------------ccccccCCccEE
Confidence 234788888888888843333445778888888888888744443333221 012233345555
Q ss_pred eccCccccCCCCCCcc--CCCCCcEEEccCCcccCcCCccccccccccEEEcc------CCcCCCCCCccccCccccccc
Q 036879 506 SLGFNRLTSVIPSSLW--SLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLS------RNDLSGEIPSSIGDLKNMQHL 577 (1029)
Q Consensus 506 ~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls------~N~l~~~~p~~~~~l~~L~~L 577 (1029)
+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|+ +|++.+.+|..|..+++|+.|
T Consensus 734 ~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L 811 (876)
T 4ecn_A 734 DLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQL 811 (876)
T ss_dssp ECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred ECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEE
Confidence 55555554 2344443 45555555555555554 45555555555555554 477777888888888888888
Q ss_pred ccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCc
Q 036879 578 SLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 578 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 633 (1029)
+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|+++
T Consensus 812 ~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 812 QIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp ECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 8888888 46777665 58888888888887666666666666666777776655
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6e-55 Score=532.56 Aligned_cols=525 Identities=19% Similarity=0.174 Sum_probs=429.2
Q ss_pred CCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEecc
Q 036879 74 LSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLS 153 (1029)
Q Consensus 74 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 153 (1029)
...++.++++++ .+|..+. ++|++|+|++|+++.+. |..|..+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls 88 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILK-SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILT 88 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeC-hhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECC
Confidence 356888888888 7777654 77888888888888532 4578888888888888888887777788888888888888
Q ss_pred CCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEc
Q 036879 154 FNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSL 233 (1029)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 233 (1029)
+|++++..|..|.++++|++|++++|++++ ..|..++++++|++|+|
T Consensus 89 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~---------------------------------~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 89 GNPIQSFSPGSFSGLTSLENLVAVETKLAS---------------------------------LESFPIGQLITLKKLNV 135 (606)
T ss_dssp TCCCCCCCTTSSTTCTTCCEEECTTSCCCC---------------------------------SSSSCCTTCTTCCEEEC
T ss_pred CCcccccChhhcCCcccCCEEEccCCcccc---------------------------------ccccccCCCCCCCEEeC
Confidence 888887778888888888887777777653 33456788999999999
Q ss_pred ccccccC-CCCccccccccccceeecccccccccC-------c----ccEEEccCCcccCCCCCCcccCCCCcEEEccCc
Q 036879 234 SVNNFIG-SIPREIGNITMLKGLYLVYTNLTGEIQ-------G----LQVLALSSNRLTGVIPPEIINISSLTVLSLTAN 301 (1029)
Q Consensus 234 s~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~l~-------~----L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 301 (1029)
++|++++ .+|..|+++++|+.|++++|++++..+ + +.+|++++|+++++.+..+... +|++|++++|
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n 214 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGN 214 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCC
Confidence 9999986 679999999999998888888875322 2 3478888888886666555554 7888888888
Q ss_pred ccCCCCCchhhhcccccceEeecCcccCC------CCCccccccc--ccceecC-CCccccCCCCCCCCCCCCCcccccc
Q 036879 302 NLLGNLPSNIGHSLPNLQQLILGGNRLTG------PIPSSISNAS--MLTLIDM-PYNLFSGFIPNSLGFCHPYDELGFL 372 (1029)
Q Consensus 302 ~l~~~lp~~~~~~l~~L~~L~L~~N~l~~------~~p~~l~~l~--~L~~L~l-s~N~l~~~~p~~~~~~~~~~~~~~~ 372 (1029)
.+.+......+..+++|+.+++..+.+.+ ..+..+..+. .++.+++ ..|.+.+.+|.
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-------------- 280 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-------------- 280 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS--------------
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc--------------
Confidence 87643333334468888888876655442 1122222222 3445555 55666655443
Q ss_pred cccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCC
Q 036879 373 TSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQ 452 (1029)
Q Consensus 373 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 452 (1029)
+..+++|+.|++++|.+. .+| .+..+.+ |+.|++++|++ +.+| .+ .+++|++|++++|+..+.. .+..++
T Consensus 281 --~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~-L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~ 350 (606)
T 3vq2_A 281 --FHCLANVSAMSLAGVSIK-YLE-DVPKHFK-WQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALP 350 (606)
T ss_dssp --CGGGTTCSEEEEESCCCC-CCC-CCCTTCC-CSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCT
T ss_pred --cccCCCCCEEEecCccch-hhh-hcccccc-CCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCC
Confidence 457899999999999997 556 7777776 99999999999 5777 45 9999999999999665433 678999
Q ss_pred CCCEEEeccccccCcc--cccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCC-CCccCCCCCcEE
Q 036879 453 KLQGLYLQHNKLQGSI--TTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIP-SSLWSLRDILNV 529 (1029)
Q Consensus 453 ~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L 529 (1029)
+|++|++++|++++.. +..+..+++|++|++++|.+.+ .|..+..+++|++|++++|++++..| ..+..+++|+.|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 9999999999998774 7888999999999999999985 56899999999999999999999887 789999999999
Q ss_pred EccCCcccCcCCccccccccccEEEccCCcCCC-CCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcc
Q 036879 530 NLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSG-EIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNL 608 (1029)
Q Consensus 530 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 608 (1029)
++++|.+++..|..++.+++|+.|++++|.+++ .+|..|+.+++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 999999999999999999999999999999997 4789999999999999999999999999999999999999999999
Q ss_pred cCcCchhhhcccccceeeccCCCCcCCCCCCCCCC-ccCcccccCCCCCCCCCC
Q 036879 609 SGEIPNSLKALSLLKFLNLSFNGLQGQVPHGGPFT-NLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 609 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~l~~~~~~~n~~~c~~~~ 661 (1029)
++.+|..+.++++|+.|++++|+++..++....+. ++..+.+.+|||.|+|+.
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999999999996544444454 588899999999999975
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-53 Score=537.69 Aligned_cols=529 Identities=20% Similarity=0.215 Sum_probs=447.4
Q ss_pred CceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCC-ccccccccCCceeecccccccCCCCC
Q 036879 36 CNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTL-PIQLSNLRRLKYLSFRSNNFSSIEIP 114 (1029)
Q Consensus 36 c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~p 114 (1029)
|+|.+|.+ -..+++.|+|++|.+.+..|..+.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|+++.+ .|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~-~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL-HP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE-CT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc-CH
Confidence 56777776 4568999999999999888999999999999999999776666 78899999999999999999974 48
Q ss_pred CcCCCCCccceeccccccccCCCccc--ccCccccCeEeccCCcCcccCC-ccccCCCcCcccccCCCcCcccCCCCCCC
Q 036879 115 PWLDSFPKLEHLYLDGNSFIGTIPPS--ICNISSLLTLDLSFNQLQGHVP-SSILNIPSLLAIDLSNNQFSGPMPSIYNT 191 (1029)
Q Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 191 (1029)
..|+.+++|++|+|++|++++.+|.. |+++++|++|+|++|++++..| ..|.++++|++|+|++|.+++..+..+.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~- 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE- 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH-
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc-
Confidence 89999999999999999999877765 9999999999999999987655 5899999999999999999877664332
Q ss_pred CCcccccccccccchhccccccccCCCCcccccccc------cceEEcccccccCCCCcccccc---ccccceeeccccc
Q 036879 192 SPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQ------LKILSLSVNNFIGSIPREIGNI---TMLKGLYLVYTNL 262 (1029)
Q Consensus 192 ~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l 262 (1029)
.+...+|+.|+|+.|.+.+..|..++.+.+ |+.|++++|++++.+|..+... .+++.|.+..+..
T Consensus 170 ------~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 170 ------PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp ------HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred ------cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 112257889999999999989888887776 9999999999999888887754 3445454443322
Q ss_pred ccccCcccEEEccCCcccCCCCCCcccC--CCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCccccccc
Q 036879 263 TGEIQGLQVLALSSNRLTGVIPPEIINI--SSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNAS 340 (1029)
Q Consensus 263 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 340 (1029)
.. +++.|.+.+..+..|.++ ++|+.|+|++|.+.+..|.. +..+++|+.|+|++|++++..|..|..++
T Consensus 244 ~~--------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 314 (844)
T 3j0a_A 244 GA--------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRV-FETLKDLKVLNLAYNKINKIADEAFYGLD 314 (844)
T ss_dssp BC--------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCC-SSSCCCCCEEEEESCCCCEECTTTTTTCS
T ss_pred cc--------cccccccCCCChhhhhccccCCccEEECCCCcccccChhh-hhcCCCCCEEECCCCcCCCCChHHhcCCC
Confidence 21 223556665666667765 78999999999997544444 45799999999999999999999999999
Q ss_pred ccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccccccccc
Q 036879 341 MLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSI 420 (1029)
Q Consensus 341 ~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~ 420 (1029)
+|+.|++++|.+.+..|..+ ..+++|+.|++++|++.+..+..+..+++ |++|++++|.+++.
T Consensus 315 ~L~~L~Ls~N~l~~~~~~~~---------------~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~Ls~N~l~~i- 377 (844)
T 3j0a_A 315 NLQVLNLSYNLLGELYSSNF---------------YGLPKVAYIDLQKNHIAIIQDQTFKFLEK-LQTLDLRDNALTTI- 377 (844)
T ss_dssp SCCEEEEESCCCSCCCSCSC---------------SSCTTCCEEECCSCCCCCCCSSCSCSCCC-CCEEEEETCCSCCC-
T ss_pred CCCEEECCCCCCCccCHHHh---------------cCCCCCCEEECCCCCCCccChhhhcCCCC-CCEEECCCCCCCcc-
Confidence 99999999999987766554 47899999999999999888888888887 99999999999843
Q ss_pred ccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccc-cccCCCCCcEEecCCCcccCcccc-cccc
Q 036879 421 PSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITT-DLCGLRSLSEFYSDGNELNGSLPQ-CLDS 498 (1029)
Q Consensus 421 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~-~~~~ 498 (1029)
..+++|+.|++++|+++ .+|.. ..+++.|++++|++++.... .+..+++|+.|++++|++++..+. .+..
T Consensus 378 ----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 378 ----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred ----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 23789999999999999 45543 56899999999999876443 356899999999999999866544 4667
Q ss_pred ccccceeeccCcccc-----CCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccc
Q 036879 499 LISLRTLSLGFNRLT-----SVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKN 573 (1029)
Q Consensus 499 l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 573 (1029)
+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 899999999999997 44567799999999999999999999999999999999999999999987777776 89
Q ss_pred ccccccccccccccCCccccCCCCCCEEeCcCCcccCcCc
Q 036879 574 MQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 574 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
|+.|+|++|+|++..|..|. +|+.|++++|.+....+
T Consensus 528 L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp CCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred ccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 99999999999998887764 78999999999986543
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-51 Score=496.42 Aligned_cols=529 Identities=19% Similarity=0.202 Sum_probs=402.6
Q ss_pred ccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccC
Q 036879 56 AYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIG 135 (1029)
Q Consensus 56 ~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 135 (1029)
++.++. +||..+. +.++.|+|++|++++..+..|.++++|++|+|++|+++.+. |..|+.+++|++|+|++|++++
T Consensus 15 ~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~-~~~~~~l~~L~~L~L~~n~l~~ 90 (570)
T 2z63_A 15 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE-DGAYQSLSHLSTLILTGNPIQS 90 (570)
T ss_dssp CSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEEC-TTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccC-cccccCchhCCEEeCcCCcCCc
Confidence 344554 6777553 57899999999999777888999999999999999988642 5678889999999999999887
Q ss_pred CCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhcccccccc
Q 036879 136 TIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLS 215 (1029)
Q Consensus 136 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~ 215 (1029)
..|..|+++++|++|++++|++++..+..+.++++|++|++++|.+++.
T Consensus 91 ~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~------------------------------- 139 (570)
T 2z63_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------------- 139 (570)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCC-------------------------------
T ss_pred cCHhhhcCccccccccccccccccCCCccccccccccEEecCCCcccee-------------------------------
Confidence 7778889999999999999999855555688888888888887776531
Q ss_pred CCCCcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcE
Q 036879 216 GQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTV 295 (1029)
Q Consensus 216 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 295 (1029)
.+|..|+++++|++|++++|++++..|..++.+++|..+ .+.|++++|.++++.|..+..+ +|++
T Consensus 140 -~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~-------------~~~L~l~~n~l~~~~~~~~~~~-~L~~ 204 (570)
T 2z63_A 140 -KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL-------------NLSLDLSLNPMNFIQPGAFKEI-RLHK 204 (570)
T ss_dssp -CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC-------------CCEEECTTCCCCEECTTTTTTC-EEEE
T ss_pred -cChhhhcccCCCCEEeCcCCccceecHHHccchhccchh-------------hhhcccCCCCceecCHHHhccC-ccee
Confidence 246677788888888888888887777777777666311 1367777777777666666655 6788
Q ss_pred EEccCcccCC-CCCchhhhcccccceEeecCcccC------CCCCccccccc--ccceecCCCc-cccCCCCCCCCCCCC
Q 036879 296 LSLTANNLLG-NLPSNIGHSLPNLQQLILGGNRLT------GPIPSSISNAS--MLTLIDMPYN-LFSGFIPNSLGFCHP 365 (1029)
Q Consensus 296 L~Ls~N~l~~-~lp~~~~~~l~~L~~L~L~~N~l~------~~~p~~l~~l~--~L~~L~ls~N-~l~~~~p~~~~~~~~ 365 (1029)
|++++|.... .+|..+ ..+++++.+.+.-+.+. ......+..+. .++.++++++ .+.+..|..
T Consensus 205 L~l~~n~~~~~~~~~~~-~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~------ 277 (570)
T 2z63_A 205 LTLRNNFDSLNVMKTCI-QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDL------ 277 (570)
T ss_dssp EEEESCCSCTTHHHHHH-HTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTT------
T ss_pred Eecccccccccchhhhh-cCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhh------
Confidence 8887774432 222222 34666666555433221 12223333333 2455666665 555554443
Q ss_pred CcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccccc
Q 036879 366 YDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIP 445 (1029)
Q Consensus 366 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 445 (1029)
+..+++|+.|++++|.+. .+|..+..+ . |+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+
T Consensus 278 ---------~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~-L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~ 342 (570)
T 2z63_A 278 ---------FNCLTNVSSFSLVSVTIE-RVKDFSYNF-G-WQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFS 342 (570)
T ss_dssp ---------TGGGTTCSEEEEESCEEC-SCCBCCSCC-C-CSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCC
T ss_pred ---------hcCcCcccEEEecCccch-hhhhhhccC-C-ccEEeeccCccc-ccCc--ccccccCEEeCcCCccccccc
Confidence 346788888888888887 577777777 3 888888888888 4554 467889999999998886555
Q ss_pred ccccCCCCCCEEEeccccccCcc--cccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCC-CCccC
Q 036879 446 KAIGRLQKLQGLYLQHNKLQGSI--TTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIP-SSLWS 522 (1029)
Q Consensus 446 ~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~ 522 (1029)
. ..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|++++..+ ..+..
T Consensus 343 ~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 419 (570)
T 2z63_A 343 E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLS 419 (570)
T ss_dssp C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTT
T ss_pred c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhc
Confidence 4 67889999999999987664 66788889999999999998866555 8999999999999999988766 57889
Q ss_pred CCCCcEEEccCCcccCcCCccccccccccEEEccCCcCC-CCCCccccCcccccccccccccccccCCccccCCCCCCEE
Q 036879 523 LRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLS-GEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFL 601 (1029)
Q Consensus 523 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 601 (1029)
+++|+.|++++|.+++..|..+..+++|+.|++++|.++ +.+|..|..+++|+.|+|++|++++..|..|..+++|++|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 999999999999999888889999999999999999997 5688899999999999999999998889999999999999
Q ss_pred eCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCCCCC-CccCc--ccccCCCCCCCCC
Q 036879 602 DMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHGGPF-TNLSS--QSFVGNKGLCGAP 660 (1029)
Q Consensus 602 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~~l~~--~~~~~n~~~c~~~ 660 (1029)
+|++|++++.+|..+.++++|+.|++++|+++|.+|....+ .++.. ..+.+.+ .|..|
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 99999999888888999999999999999999988864333 22222 2344544 66655
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.4e-51 Score=490.91 Aligned_cols=499 Identities=20% Similarity=0.205 Sum_probs=346.3
Q ss_pred CCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCC
Q 036879 35 VCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIP 114 (1029)
Q Consensus 35 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p 114 (1029)
.|.|.|| |+.. ++++. +||+.+. ++|++|+|++|++++..|..|+++++|++|+|++|+++.+ .|
T Consensus 3 ~C~~~~~-c~~~----------~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGR----------SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTI-EG 67 (549)
T ss_dssp EECTTSE-EECT----------TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEE-CT
T ss_pred cCCCCce-EECC----------CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCcc-Ch
Confidence 5999999 9654 34454 7888765 7899999999999988889999999999999999999964 36
Q ss_pred CcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcc-cCCccccCCCcCcccccCCCcC-cccCCCCCCCC
Q 036879 115 PWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQG-HVPSSILNIPSLLAIDLSNNQF-SGPMPSIYNTS 192 (1029)
Q Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~~ 192 (1029)
..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|.+ ...++..+..
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~- 146 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG- 146 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-
Confidence 789999999999999999997777779999999999999999986 3577889999999999888874 3332222210
Q ss_pred CcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEE
Q 036879 193 PLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVL 272 (1029)
Q Consensus 193 ~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L 272 (1029)
..+|++|++++|++++.+|..+..+++|++|++++|.+. .+|..+. +.+++|++|
T Consensus 147 --------l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~----------------~~l~~L~~L 201 (549)
T 2z81_A 147 --------LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFA----------------DILSSVRYL 201 (549)
T ss_dssp --------CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHH----------------HSTTTBSEE
T ss_pred --------ccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhH----------------hhcccccEE
Confidence 123444444445554444555555555555555544433 2222211 123345566
Q ss_pred EccCCcccCCC--C-CCcccCCCCcEEEccCcccCCCCCchhh---hcccccceEeecCcccCCCCCcccccccccceec
Q 036879 273 ALSSNRLTGVI--P-PEIINISSLTVLSLTANNLLGNLPSNIG---HSLPNLQQLILGGNRLTGPIPSSISNASMLTLID 346 (1029)
Q Consensus 273 ~Ls~N~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~lp~~~~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 346 (1029)
+|++|++++.. | .....+++|+.|++++|.+.+..+..+. ..+++|+.|++++|.+.+...-
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~------------ 269 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDF------------ 269 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCC------------
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccc------------
Confidence 66666666432 1 1223455666666666666543333322 1234555555555554432100
Q ss_pred CCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCC
Q 036879 347 MPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGN 426 (1029)
Q Consensus 347 ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~ 426 (1029)
+. .....+..+.+|+.|+++++.+.... .+. .++..+..
T Consensus 270 ----------~~-----------~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~------------------~l~~~~~~ 308 (549)
T 2z81_A 270 ----------NP-----------SESDVVSELGKVETVTIRRLHIPQFY--LFY------------------DLSTVYSL 308 (549)
T ss_dssp ----------CC-----------CTTTCCCCCTTCCEEEEESCBCSCGG--GSC------------------CCCHHHHH
T ss_pred ----------cc-----------cchhhhhhhcccccccccccccchhh--hcc------------------cchhhhhh
Confidence 00 00112345667788888877654211 000 11122233
Q ss_pred cCcCcEEEecCccccccccccc-cCCCCCCEEEeccccccCccc---ccccCCCCCcEEecCCCcccCccc--ccccccc
Q 036879 427 LNNLTTLHLETNELTGSIPKAI-GRLQKLQGLYLQHNKLQGSIT---TDLCGLRSLSEFYSDGNELNGSLP--QCLDSLI 500 (1029)
Q Consensus 427 l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~ 500 (1029)
..+|+.|++++|+++ .+|..+ ..+++|++|+|++|++++..+ ..+..+++|+.|++++|++++..+ ..+..++
T Consensus 309 ~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 309 LEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp STTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred cccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 467888888888887 455554 568888888888888876553 336677888888888888876543 5688889
Q ss_pred ccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccc
Q 036879 501 SLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLA 580 (1029)
Q Consensus 501 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 580 (1029)
+|++|++++|+++ .+|..+..+++|+.|++++|++++ +|..+ .++|+.|++++|++++.+ ..+++|+.|+|+
T Consensus 388 ~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 388 NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred CCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 9999999999998 467788888999999999999884 44433 258999999999998642 578899999999
Q ss_pred cccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 581 DNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 581 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
+|+|+ .+|. ...+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|.
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99998 6665 46789999999999999988888899999999999999999887764
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-49 Score=477.33 Aligned_cols=515 Identities=21% Similarity=0.219 Sum_probs=414.4
Q ss_pred CeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccC
Q 036879 75 SLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSF 154 (1029)
Q Consensus 75 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 154 (1029)
..++.++.+++ .+|..+. +++++|+|++|+++.+. +..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEEC-TTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccC-hhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 45677777777 6776543 46788888888877542 45677788888888888887766666777788888888888
Q ss_pred CcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcc
Q 036879 155 NQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLS 234 (1029)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 234 (1029)
|++++..|..|.++++|++|++++|++++ ..+..++.+++|++|+++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------------------l~~~~~~~l~~L~~L~L~ 132 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLAS---------------------------------LENFPIGHLKTLKELNVA 132 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCC---------------------------------STTCSCTTCTTCCEEECC
T ss_pred CcCCccCHhhhcCcccccccccccccccc---------------------------------CCCccccccccccEEecC
Confidence 88876666777777777777777776653 223357789999999999
Q ss_pred cccccC-CCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCC----cEEEccCcccCCCCCc
Q 036879 235 VNNFIG-SIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSL----TVLSLTANNLLGNLPS 309 (1029)
Q Consensus 235 ~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L----~~L~Ls~N~l~~~lp~ 309 (1029)
+|++++ .+|..|+++++|+ +|++++|++++..|..+..+++| +.|++++|.+.+ ++.
T Consensus 133 ~n~l~~~~lp~~~~~l~~L~-----------------~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~-~~~ 194 (570)
T 2z63_A 133 HNLIQSFKLPEYFSNLTNLE-----------------HLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQP 194 (570)
T ss_dssp SSCCCCCCCCGGGGGCTTCC-----------------EEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECT
T ss_pred CCccceecChhhhcccCCCC-----------------EEeCcCCccceecHHHccchhccchhhhhcccCCCCcee-cCH
Confidence 999987 4788888887665 78888888888888889999988 899999999974 444
Q ss_pred hhhhcccccceEeecCcccCC-CCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccC
Q 036879 310 NIGHSLPNLQQLILGGNRLTG-PIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSE 388 (1029)
Q Consensus 310 ~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 388 (1029)
..+. ..+|+.|++++|.... .++..+..++.++.+.+..+.+..... +. .+. ...+..+..+ .++.+++++
T Consensus 195 ~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~--l~---~~~-~~~~~~l~~l-~l~~l~l~~ 266 (570)
T 2z63_A 195 GAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN--LE---KFD-KSALEGLCNL-TIEEFRLAY 266 (570)
T ss_dssp TTTT-TCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS--CE---ECC-TTTTGGGGGS-EEEEEEEEE
T ss_pred HHhc-cCcceeEecccccccccchhhhhcCccccceeeeccccccCchh--hh---hcc-hhhhcccccc-chhhhhhhc
Confidence 4454 3489999999986542 345666777777766665443322100 00 000 0011112222 367888888
Q ss_pred C-cCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCc
Q 036879 389 N-PLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGS 467 (1029)
Q Consensus 389 N-~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 467 (1029)
+ .+.+..|..+..+.+ ++.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. ..+++|++|++++|.+.+.
T Consensus 267 ~~~~~~~~~~~~~~l~~-L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTN-VSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp TTEEESCSTTTTGGGTT-CSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCB
T ss_pred chhhhhhchhhhcCcCc-ccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccc
Confidence 8 778888888888877 999999999999 688888888 9999999999999 5564 4788999999999999766
Q ss_pred ccccccCCCCCcEEecCCCcccCcc--ccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCC-ccc
Q 036879 468 ITTDLCGLRSLSEFYSDGNELNGSL--PQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLP-VEI 544 (1029)
Q Consensus 468 ~~~~~~~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 544 (1029)
.+. ..+++|++|++++|.+++.. +..+..+++|++|++++|++++..+. +..+++|+.|++++|.+++..| ..+
T Consensus 341 ~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~ 417 (570)
T 2z63_A 341 FSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVF 417 (570)
T ss_dssp CCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTT
T ss_pred ccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhh
Confidence 555 78899999999999998665 78899999999999999999976655 9999999999999999998766 578
Q ss_pred cccccccEEEccCCcCCCCCCccccCccccccccccccccc-ccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccc
Q 036879 545 GNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQ-GSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLK 623 (1029)
Q Consensus 545 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 623 (1029)
..+++|+.|++++|.+++..|..|..+++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 99999999999999999989999999999999999999998 57899999999999999999999999899999999999
Q ss_pred eeeccCCCCcCCCCC-CCCCCccCcccccCCCCCCCCCC
Q 036879 624 FLNLSFNGLQGQVPH-GGPFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 624 ~L~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
.|++++|++++.+|. ...+++++.+.+.+||+.|+||.
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999998775 35678889999999999999985
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-50 Score=491.07 Aligned_cols=538 Identities=16% Similarity=0.202 Sum_probs=365.7
Q ss_pred hHHHHHHHHHHhccCCCCCcccCCCCCCCCC----CceeeEEEcCCC---CceEEEecccccccccCCccCCCCcCCCeE
Q 036879 5 RDQSALLALKAHVTNDPLNVLASNWSTNTSV----CNWFGVTCSPRH---RRVTALNLAYMGLLGTIPPELGNLSFLSLL 77 (1029)
Q Consensus 5 ~~~~al~~~~~~~~~~~~~~~~~~w~~~~~~----c~w~gv~c~~~~---~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L 77 (1029)
.+...-.|+++-+..-. ..+|....+. |+|..-+.-+.. .-|++- . -..++.|
T Consensus 27 ~~~~d~~aL~~~~~~~~----~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~---~-------------~~~V~~L 86 (636)
T 4eco_A 27 EYIKDYLALKEIWDALN----GKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN---S-------------NGRVTGL 86 (636)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGCCCCC------CCCCCSSCGGGTTCCTTEEEC---T-------------TCCEEEE
T ss_pred hHHHHHHHHHHHHHHcC----CCCcccCCcCCccCCCCCCCCCcccccCCCCeEEc---C-------------CCCEEEE
Confidence 34456677777774322 2358744432 479643221222 345541 0 0457899
Q ss_pred eccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcC
Q 036879 78 NVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQL 157 (1029)
Q Consensus 78 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 157 (1029)
+|++|+++|.+|.+|++|++|++|+|++|.+... +..++.. .+.-.+|+.. +..|+ +++++|.+
T Consensus 87 ~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~--~~~~~~~-----------~~~~~~~~~~--~~~l~-l~l~~~~l 150 (636)
T 4eco_A 87 SLEGFGASGRVPDAIGQLTELEVLALGSHGEKVN--ERLFGPK-----------GISANMSDEQ--KQKMR-MHYQKTFV 150 (636)
T ss_dssp ECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGT--CCSBSTT-----------SBCTTCCHHH--HHHHH-THHHHHHT
T ss_pred EecCcccCCcCChHHhcCccceEEECcCCccccC--Ccccccc-----------ccccCchHHH--HHHHH-hhHHHhhh
Confidence 9999999999999999999999999999987421 1111100 0001223222 33344 44444444
Q ss_pred cccCCccccC-CCcCcccccCCCcCcccCCCCCCCCCcccccccccccchh--ccccccccCCCCcccccccccceEEcc
Q 036879 158 QGHVPSSILN-IPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAEL--HLAYNQLSGQIPSTLFECKQLKILSLS 234 (1029)
Q Consensus 158 ~~~~p~~~~~-l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L--~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 234 (1029)
.+.+|..+.. +..+..+++....+.... . -.++.+ ....|++++ +|..|+++++|++|+|+
T Consensus 151 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~----------~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls 214 (636)
T 4eco_A 151 DYDPREDFSDLIKDCINSDPQQKSIKKSS-----R----------ITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMG 214 (636)
T ss_dssp CCCGGGGSCHHHHHHHHHCTTSCCCCCCC-----C----------CCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEE
T ss_pred ccCchhhHHHHHHHHhhcCcccccccccc-----c----------cchhhhhhccccCCCcc-CCHHHhcccCCCEEECc
Confidence 4444443332 122333333332222100 0 012222 334688988 89999999999999999
Q ss_pred cccccCC-----------------CCcccc--ccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcE
Q 036879 235 VNNFIGS-----------------IPREIG--NITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTV 295 (1029)
Q Consensus 235 ~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 295 (1029)
+|++++. +|..++ ++++|+ +|+|++|++.+.+|..+.++++|++
T Consensus 215 ~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~-----------------~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 215 NSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLT-----------------DVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp SCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC-----------------EEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCccccccccccccccccchhcccCchhhhhcccCCCC-----------------EEEecCCcCCccChHHHhcCCCCCE
Confidence 9999985 888877 776655 7888888888899999999999999
Q ss_pred EEccCcc-cCC-CCCchhhhcc------cccceEeecCcccCCCCCc--ccccccccceecCCCccccCCCCCCCCCCCC
Q 036879 296 LSLTANN-LLG-NLPSNIGHSL------PNLQQLILGGNRLTGPIPS--SISNASMLTLIDMPYNLFSGFIPNSLGFCHP 365 (1029)
Q Consensus 296 L~Ls~N~-l~~-~lp~~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 365 (1029)
|+|++|+ +++ .+|..++. + ++|++|+|++|+++ .+|. .++++++|+.|++++|.+.|.+| .+
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~-L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~----- 349 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQA-LADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF----- 349 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHH-HHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC-----
T ss_pred EECcCCCCCccccchHHHHh-hhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh-----
Confidence 9999998 877 78888764 4 88899999998888 6776 77777777777777776665554 22
Q ss_pred CcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCc-CcEEEecCccccccc
Q 036879 366 YDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNN-LTTLHLETNELTGSI 444 (1029)
Q Consensus 366 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~ 444 (1029)
..+++|++|++++|+++ .+|..|.++++ |++|+|++|+++ .+
T Consensus 350 ----------~~l~~L~~L~L~~N~l~--------------------------~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 350 ----------GSEIKLASLNLAYNQIT--------------------------EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp ----------EEEEEESEEECCSSEEE--------------------------ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred ----------CCCCCCCEEECCCCccc--------------------------cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 24455555555555544 44455555555 666666666666 45
Q ss_pred cccccCCC--CCCEEEeccccccCccccccc-------CCCCCcEEecCCCcccCccccccccccccceeeccCccccCC
Q 036879 445 PKAIGRLQ--KLQGLYLQHNKLQGSITTDLC-------GLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSV 515 (1029)
Q Consensus 445 ~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (1029)
|..+..++ +|++|++++|++++..|..|. .+++|+.|++++|+++...+..+..+++|++|+|++|+++.+
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i 472 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEI 472 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBC
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCc
Confidence 55554433 566666666666665555555 556677777777777755555666788888888888888855
Q ss_pred CCCCccCCC-------CCcEEEccCCcccCcCCcccc--ccccccEEEccCCcCCCCCCccccCccccccccc------c
Q 036879 516 IPSSLWSLR-------DILNVNLSSNSLNGTLPVEIG--NLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSL------A 580 (1029)
Q Consensus 516 ~~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~ 580 (1029)
.+..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| +
T Consensus 473 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls 550 (636)
T 4eco_A 473 PKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550 (636)
T ss_dssp CSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTT
T ss_pred CHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccc
Confidence 555554443 9999999999999 6888887 99999999999999997 8999999999999999 5
Q ss_pred cccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCCC-C--CCccCcccccCCCCCC
Q 036879 581 DNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHGG-P--FTNLSSQSFVGNKGLC 657 (1029)
Q Consensus 581 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~--~~~l~~~~~~~n~~~c 657 (1029)
+|++.+.+|..+..+++|++|+|++|+++ .+|..+. ++|+.|++++|++.+...... + ......+.+..+...|
T Consensus 551 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 627 (636)
T 4eco_A 551 GNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQDIR 627 (636)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCEEECTTTHHHHHTTCCEEECCTTSEEE
T ss_pred cCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCccccHHhcchhhhcccceeecCCccccC
Confidence 68888899999999999999999999995 7777665 799999999999886433211 0 1222233344555566
Q ss_pred CCCC
Q 036879 658 GAPE 661 (1029)
Q Consensus 658 ~~~~ 661 (1029)
|||.
T Consensus 628 ~C~~ 631 (636)
T 4eco_A 628 GCDA 631 (636)
T ss_dssp SCGG
T ss_pred CCcc
Confidence 7764
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-50 Score=441.30 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=210.6
Q ss_pred CCCCCCceeccCcceEEEEEEec------CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45778899999999999999863 478899999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEE
Q 036879 812 VLEYMPNGSLENWMYNKN------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACL 879 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl 879 (1029)
|||||++|+|.++++..+ ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997542 46999999999999999999999 677999999999999999999999
Q ss_pred EccCCceecCCCCCce-eccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhcc
Q 036879 880 SDFGISKLLGDETSMT-QTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSL 953 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 953 (1029)
+|||+|+......... .....||++|||||+ .++.++|||||||++|||+| |+.||.+....+. ..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~--~~------ 241 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV--IE------ 241 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HH------
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--HH------
Confidence 9999998764433222 223468999999998 47889999999999999999 8999976321110 00
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 954 HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 954 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
.+.. ....+.|..++.++.+++.+||+.||++|||++|+.+.|+.+.+.-.
T Consensus 242 -----~i~~-------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 242 -----CITQ-------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp -----HHHH-------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred -----HHHc-------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 0000 00112234578889999999999999999999999999998876543
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-50 Score=437.59 Aligned_cols=260 Identities=26% Similarity=0.440 Sum_probs=205.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..+++++.++||+|+||+||+|++.+ .||||+++... ....+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34678888999999999999998753 69999987543 3445789999999999999999999999865 4579999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC-
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET- 892 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 892 (1029)
|||++|+|.+++......+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999999887788999999999999999999999 6779999999999999999999999999998764322
Q ss_pred CceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
........||+.|||||++ ++.++|||||||++|||+||+.||.+...... +...+... ...+..
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~-------~~~p~~ 259 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRG-------YASPDL 259 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTT-------CCCCCS
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcC-------CCCCCc
Confidence 2223346799999999984 56789999999999999999999975321111 00000000 000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
...+..++.++.+++.+||+.||++||||+||+++|+.+...+.
T Consensus 260 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 11223567889999999999999999999999999998876653
No 19
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-48 Score=479.45 Aligned_cols=564 Identities=18% Similarity=0.180 Sum_probs=406.3
Q ss_pred CCCcccCCCCCCCCCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCce
Q 036879 21 PLNVLASNWSTNTSVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKY 100 (1029)
Q Consensus 21 ~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 100 (1029)
+-+.+++ |+... +..|+.+.|......|. =++.+|. +||+.+- +++++|||++|+|++..|.+|.++++|++
T Consensus 9 ~~~~~~~-~~~~~-p~~~~~c~~~~~~~~~~---c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~ 80 (635)
T 4g8a_A 9 DDDKLAA-ANSSI-PESWEPCVEVVPNITYQ---CMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQV 80 (635)
T ss_dssp ------------------CCSEEEETTTEEE---CTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred Ccchhhc-ccCCC-CCCCCCccccCCCCEEE---CCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCE
Confidence 3355666 66443 34577777764444443 2344555 7777652 47899999999999777789999999999
Q ss_pred eecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCc
Q 036879 101 LSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQ 180 (1029)
Q Consensus 101 L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 180 (1029)
|+|++|+|+.++ |..|+.+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|+
T Consensus 81 L~Ls~N~i~~i~-~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 81 LDLSRCEIQTIE-DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp EECTTCCCCEEC-TTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred EECCCCcCCCcC-hhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCc
Confidence 999999999653 5678999999999999999997666789999999999999999997666789999999999999888
Q ss_pred CcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeeccc
Q 036879 181 FSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYT 260 (1029)
Q Consensus 181 l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 260 (1029)
+++. .+|..++.+++|++|+|++|++++..|..|..+.+++.+
T Consensus 160 l~~~--------------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~----- 202 (635)
T 4g8a_A 160 IQSF--------------------------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL----- 202 (635)
T ss_dssp CCCC--------------------------------CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC-----
T ss_pred cccC--------------------------------CCchhhccchhhhhhcccCccccccccccccchhhhhhh-----
Confidence 7632 246677788889999999999888888888877766532
Q ss_pred ccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcc------cCCCCCc
Q 036879 261 NLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNR------LTGPIPS 334 (1029)
Q Consensus 261 ~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~------l~~~~p~ 334 (1029)
+..++++.|.++.+.+..+ ....++.+++++|.....++...+..+..++...+..+. +......
T Consensus 203 --------~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 273 (635)
T 4g8a_A 203 --------NLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 273 (635)
T ss_dssp --------CCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTT
T ss_pred --------hhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccc
Confidence 2367788888875554444 344577888887766544555555567777766665433 2333445
Q ss_pred ccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccc
Q 036879 335 SISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSAC 414 (1029)
Q Consensus 335 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n 414 (1029)
.+.....+...++..+......... ...+..+.+++.+++.++.+....+ +..... ++.|++.+|
T Consensus 274 ~~~~~~~l~~~~l~~~~~~~~~~~~------------~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~-L~~L~l~~~ 338 (635)
T 4g8a_A 274 ALEGLCNLTIEEFRLAYLDYYLDGI------------IDLFNCLTNVSSFSLVSVTIERVKD--FSYNFG-WQHLELVNC 338 (635)
T ss_dssp TTGGGGGSEEEEEEEECCCSCEEEC------------TTTTGGGTTCSEEEEESCEEEECGG--GGSCCC-CSEEEEESC
T ss_pred ccccccchhhhhhhhhhhcccccch------------hhhhhhhcccccccccccccccccc--cccchh-hhhhhcccc
Confidence 5555666666655554433221111 1223456677888888887764332 222233 778888888
Q ss_pred ccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCc--ccccccCCCCCcEEecCCCcccCcc
Q 036879 415 NIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGS--ITTDLCGLRSLSEFYSDGNELNGSL 492 (1029)
Q Consensus 415 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~ 492 (1029)
.+....+. .+..|+.+++..|.+... ..+..+++|+.|++++|.+... .+..+..+.+|+.+++..|.+.. .
T Consensus 339 ~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~ 412 (635)
T 4g8a_A 339 KFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-M 412 (635)
T ss_dssp EESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-E
T ss_pred cccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-c
Confidence 88755443 356788888888887632 2345678888888888887543 34556677888888888888763 4
Q ss_pred ccccccccccceeeccCccccCCCC-CCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCC-CCCCccccC
Q 036879 493 PQCLDSLISLRTLSLGFNRLTSVIP-SSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLS-GEIPSSIGD 570 (1029)
Q Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~ 570 (1029)
+..+..+++|+.++++.|......+ ..|..+++++.++++.|.+++..+..+..++.|+.|+|++|.+. +..|..|..
T Consensus 413 ~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~ 492 (635)
T 4g8a_A 413 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 492 (635)
T ss_dssp CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh
Confidence 5567788888888888877765543 46778888888888888888888888888888888888888743 456778888
Q ss_pred cccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC-CCC-CccCcc
Q 036879 571 LKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPF-TNLSSQ 648 (1029)
Q Consensus 571 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~l~~~ 648 (1029)
+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++.+|.. ..+ ++++.+
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 888888888888888888888888888888999888888888888888888888899888888877763 233 567788
Q ss_pred cccCCCCCCCCC
Q 036879 649 SFVGNKGLCGAP 660 (1029)
Q Consensus 649 ~~~~n~~~c~~~ 660 (1029)
.+.+|||.|+|.
T Consensus 573 ~L~~Np~~C~C~ 584 (635)
T 4g8a_A 573 NLTQNDFACTCE 584 (635)
T ss_dssp ECTTCCBCCSGG
T ss_pred EeeCCCCcccCC
Confidence 888999999875
No 20
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.8e-50 Score=443.22 Aligned_cols=256 Identities=26% Similarity=0.446 Sum_probs=204.5
Q ss_pred CCCCCCceeccCcceEEEEEEec------CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
++|.+.++||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34667789999999999999864 478899999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcE
Q 036879 812 VLEYMPNGSLENWMYNKN--------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVA 877 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~ 877 (1029)
|||||++|+|.++++... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997542 35899999999999999999999 6779999999999999999999
Q ss_pred EEEccCCceecCCCCC-ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchh
Q 036879 878 CLSDFGISKLLGDETS-MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVND 951 (1029)
Q Consensus 878 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 951 (1029)
||+|||+|+....... .......||+.|||||++ ++.++|||||||++|||+| |+.||.+....+. .
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~--~----- 270 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA--I----- 270 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH--H-----
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH--H-----
Confidence 9999999987643322 223346799999999984 6789999999999999999 8999976321110 0
Q ss_pred ccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 952 SLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 952 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
..+. . ....+.|..+++++.+++.+||+.||++||||+||+++|+.+.+...
T Consensus 271 -------~~i~---~---g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 271 -------DCIT---Q---GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp -------HHHH---H---TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred -------HHHH---c---CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 0000 0 01122344578889999999999999999999999999999887543
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1e-48 Score=471.61 Aligned_cols=491 Identities=19% Similarity=0.211 Sum_probs=374.8
Q ss_pred eEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCC
Q 036879 76 LLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFN 155 (1029)
Q Consensus 76 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 155 (1029)
..|.++|+++ .+|..+. ++|++|+|++|+++.+ .|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYI-GHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEE-CSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCcc-ChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 4577888887 7777654 6888888888888753 2567888888888888888888777778888888888888888
Q ss_pred cCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEccc
Q 036879 156 QLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSV 235 (1029)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 235 (1029)
++++..|..|.++++|++|++++|++++. ..|..++++++|++|++++
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~--------------------------------~~~~~~~~l~~L~~L~L~~ 132 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTL--------------------------------GVTSLFPNLTNLQTLRIGN 132 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSS--------------------------------CSSCSCTTCTTCCEEEEEE
T ss_pred ccCccCHHHhccCCCCcEEECCCCccccc--------------------------------chhhhhhccCCccEEECCC
Confidence 88866666688888888888887776632 1345677788888888888
Q ss_pred ccccCCCC-ccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhc
Q 036879 236 NNFIGSIP-REIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHS 314 (1029)
Q Consensus 236 N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~ 314 (1029)
|++.+.+| ..|+++++| ++|+|++|++++..|..+.++++|++|+++.|.+. .+|..++..
T Consensus 133 n~~~~~~~~~~~~~l~~L-----------------~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~ 194 (549)
T 2z81_A 133 VETFSEIRRIDFAGLTSL-----------------NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADI 194 (549)
T ss_dssp SSSCCEECTTTTTTCCEE-----------------EEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHS
T ss_pred CccccccCHhhhhccccc-----------------CeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhh
Confidence 88555554 456665544 47777788888888888888999999999988884 777777667
Q ss_pred ccccceEeecCcccCCCC---CcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcC
Q 036879 315 LPNLQQLILGGNRLTGPI---PSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPL 391 (1029)
Q Consensus 315 l~~L~~L~L~~N~l~~~~---p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 391 (1029)
+++|++|++++|++++.. ......+++|+.|++++|.+.+..+..+ ...+..+++|+.|++++|.+
T Consensus 195 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l-----------~~~~~~~~~L~~l~l~~~~~ 263 (549)
T 2z81_A 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL-----------LKLLRYILELSEVEFDDCTL 263 (549)
T ss_dssp TTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH-----------HGGGGGCTTCCEEEEESCEE
T ss_pred cccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH-----------HHHhhhhccccccccccccc
Confidence 889999999999988642 1223345666677777766654332211 12234456666666666665
Q ss_pred CCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccc-----ccccccCCCCCCEEEeccccccC
Q 036879 392 SGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGS-----IPKAIGRLQKLQGLYLQHNKLQG 466 (1029)
Q Consensus 392 ~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~ 466 (1029)
.+... +. ......+..+.+|+.|++.++.+... ++..+...++|+.|++++|+++.
T Consensus 264 ~~~~~-----~~--------------~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ 324 (549)
T 2z81_A 264 NGLGD-----FN--------------PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL 324 (549)
T ss_dssp ECCSC-----CC--------------CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC
T ss_pred ccccc-----cc--------------ccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcccc
Confidence 53211 00 01123355678889999999887632 22334456789999999999986
Q ss_pred cccccccCCCCCcEEecCCCcccCccc---cccccccccceeeccCccccCCCC--CCccCCCCCcEEEccCCcccCcCC
Q 036879 467 SITTDLCGLRSLSEFYSDGNELNGSLP---QCLDSLISLRTLSLGFNRLTSVIP--SSLWSLRDILNVNLSSNSLNGTLP 541 (1029)
Q Consensus 467 ~~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p 541 (1029)
.+...+..+++|++|++++|++.+..| ..++.+++|++|+|++|+++++.+ ..+..+++|+.|++++|+++ .+|
T Consensus 325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 403 (549)
T 2z81_A 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMP 403 (549)
T ss_dssp CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCC
T ss_pred CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCC
Confidence 555555789999999999999998764 447899999999999999987643 56899999999999999999 688
Q ss_pred ccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccc
Q 036879 542 VEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSL 621 (1029)
Q Consensus 542 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 621 (1029)
..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|+|++.+ ..+++|++|+|++|+|+ .+|. ...+++
T Consensus 404 ~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~ 474 (549)
T 2z81_A 404 DSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPV 474 (549)
T ss_dssp SCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTT
T ss_pred hhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCcc
Confidence 88999999999999999998 4454442 68999999999999643 57899999999999999 5665 467999
Q ss_pred cceeeccCCCCcCCCCC-CCCCCccCcccccCCCCCCCCC
Q 036879 622 LKFLNLSFNGLQGQVPH-GGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 622 L~~L~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
|+.|++++|++++.+|. ...+.++..+.+.+|||.|+||
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999999998876 4667888999999999999887
No 22
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=9.8e-50 Score=436.49 Aligned_cols=250 Identities=24% Similarity=0.420 Sum_probs=204.1
Q ss_pred CCCCCceeccCcceEEEEEEec------CCcEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 739 GFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLELE-GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
.+++.+.||+|+||+||+|++. +++.||||+++.... ...+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556789999999999999862 568899999976543 345789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc
Q 036879 812 VLEYMPNGSLENWMYNKN---------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV 876 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~ 876 (1029)
|||||++|+|.+++.... ..+++.++..|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 35899999999999999999999 677999999999999999999
Q ss_pred EEEEccCCceecCCCC-CceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhch
Q 036879 877 ACLSDFGISKLLGDET-SMTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVN 950 (1029)
Q Consensus 877 ~kl~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 950 (1029)
+||+|||+|+...... ........||++|||||+ .++.++|||||||++|||+| |+.||.+....+ +.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~~---- 257 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--VV---- 257 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--HH----
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--HH----
Confidence 9999999998664322 222334579999999998 47889999999999999998 899997632111 11
Q ss_pred hccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHh
Q 036879 951 DSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKI 1011 (1029)
Q Consensus 951 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i 1011 (1029)
..+.. ....+.|..++..+.+++.+||+.||++||||+||+++|+.+
T Consensus 258 --------~~i~~------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 258 --------EMIRN------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp --------HHHHT------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --------HHHHc------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11100 011223456788899999999999999999999999999864
No 23
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.7e-49 Score=433.80 Aligned_cols=246 Identities=22% Similarity=0.281 Sum_probs=205.8
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
..|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++++.++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46889999999999999999976 79999999998776666678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCcee
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQ 896 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 896 (1029)
+||+|.+++.. ..+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.+..... ..
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 99999999864 45999999999999999999999 77799999999999999999999999999998754432 23
Q ss_pred ccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhh
Q 036879 897 TQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAY 972 (1029)
Q Consensus 897 ~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 972 (1029)
...+||+.|||||++ ++.++||||+||++|||++|++||.+....+ .... +.+.. ...
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~--------i~~~~--------~~~ 289 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKM--------IRDNL--------PPR 289 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH--------HHHSS--------CCC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHH--------HHcCC--------CCC
Confidence 446899999999984 7889999999999999999999997531111 0000 00000 001
Q ss_pred hHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 973 LTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 973 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++.++.+++.+||..||++|||++|++++
T Consensus 290 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123456788999999999999999999999885
No 24
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.4e-49 Score=434.78 Aligned_cols=247 Identities=22% Similarity=0.338 Sum_probs=198.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999975 79999999997653 334578999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 814 EYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+||+|.+++...+ ..+++..+..|+.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997554 45799999999999999999999 7789999999999999999999999999998764321
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
......+||+.|||||++ ++.++||||+||++|||++|+.||.+....+ ... .......
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-----~~~--------~i~~~~~--- 242 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-----LVL--------KIISGSF--- 242 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHH--------HHHHTCC---
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-----HHH--------HHHcCCC---
Confidence 122345799999999984 6779999999999999999999997532111 011 1111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++.++.+++.+||+.||++|||++|++++
T Consensus 243 ----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 ----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01123456789999999999999999999999874
No 25
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-48 Score=428.69 Aligned_cols=252 Identities=22% Similarity=0.266 Sum_probs=204.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.+.|+..++||+|+||+||+|++. +|+.||||+++.... ..+|+++++.++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 345778889999999999999975 799999999975422 24799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC-cEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM-VACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+||+|.+++.+. +.+++..+..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999654 56999999999999999999999 78899999999999999987 6999999999877543211
Q ss_pred ----eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 895 ----TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 895 ----~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.....+||+.|||||++ ++.++||||+||++|||++|++||.+....+. ...+ ..
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i-----------~~---- 270 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKI-----------AS---- 270 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHH-----------HH----
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHH-----------Hc----
Confidence 12235799999999984 67899999999999999999999976422211 1000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
........+..++..+.+++.+||+.||++|||+.|+++++..+....
T Consensus 271 -~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 271 -EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 000111223456788999999999999999999999999998877654
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-48 Score=426.69 Aligned_cols=272 Identities=22% Similarity=0.317 Sum_probs=201.9
Q ss_pred CCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC----eEEEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH----FKALVL 813 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 813 (1029)
++|.+.+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999988 6899999998754321 223345666667889999999999997653 579999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYD-----HPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
||+++|+|.+++.. ..+++..+.+++.|+++||+|||+. ++++||||||||+|||++.++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~--~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999965 4589999999999999999999954 3448999999999999999999999999999876
Q ss_pred CCCCCc---eeccccCCccccCccCC----------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc-c
Q 036879 889 GDETSM---TQTQTLATIGYMAPEWK----------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL-H 954 (1029)
Q Consensus 889 ~~~~~~---~~~~~~gt~~y~aPE~~----------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 954 (1029)
...... .....+||+.|||||++ ++.++|||||||++|||+||++||......+..+........ .
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12235799999999985 345799999999999999999988664443333333221111 0
Q ss_pred hhhhhhh-hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 955 GKIINVV-DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 955 ~~~~~~~-d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
..+...+ +...... -+.......++..+.+++.+||+.||++||||+||++.|+++.+.
T Consensus 239 ~~~~~~~~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 1111111 1111000 000111234567899999999999999999999999999998764
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.6e-48 Score=459.73 Aligned_cols=440 Identities=18% Similarity=0.181 Sum_probs=277.2
Q ss_pred CccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCccccccc
Q 036879 121 PKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQ 200 (1029)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~ 200 (1029)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++++++. .+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l--------- 89 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PT--------- 89 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CC---------
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--cc---------
Confidence 4455555555555544444555555555555555555544455555555555555555555433222 11
Q ss_pred ccccchhccccccccC-CCCcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcc
Q 036879 201 YNSLAELHLAYNQLSG-QIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRL 279 (1029)
Q Consensus 201 ~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l 279 (1029)
.+|++|+|++|++++ .+|..|+.+++|++|++++|++++ ..+..+++| +|+.|+|++|++
T Consensus 90 -~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L---------------~L~~L~l~~n~l 150 (520)
T 2z7x_B 90 -VNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHL---------------NISKVLLVLGET 150 (520)
T ss_dssp -CCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTS---------------CEEEEEEEECTT
T ss_pred -CCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccc---------------eeeEEEeecccc
Confidence 134444555555554 357788888999999999988875 345555444 136788888888
Q ss_pred --cCCCCCCcccCC-CCcEEEccCcccCCCCCchhhhcccccceEeecCcc-------cCCCCCcccccccccceecCCC
Q 036879 280 --TGVIPPEIINIS-SLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNR-------LTGPIPSSISNASMLTLIDMPY 349 (1029)
Q Consensus 280 --~~~~p~~~~~l~-~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~ls~ 349 (1029)
++..|..+..+. +...+++++|.+.+.++...+..+++|+.|++++|. +.+.+| .+..+++|+.|++++
T Consensus 151 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~ 229 (520)
T 2z7x_B 151 YGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNN 229 (520)
T ss_dssp TTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEE
T ss_pred cccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccc
Confidence 777788877766 355678888888877777776778888888888886 443333 444444444444444
Q ss_pred ccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCc--hhhhcceecccccccccccccc---
Q 036879 350 NLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNL--SNAMDVLYLSACNIKGSIPSEI--- 424 (1029)
Q Consensus 350 N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~~L~~L~L~~n~l~~~~p~~~--- 424 (1029)
|.+ ++..+..+... ...|++|++++|++++.+|..+
T Consensus 230 ~~l---------------------------------------~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~ 270 (520)
T 2z7x_B 230 IET---------------------------------------TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY 270 (520)
T ss_dssp EEE---------------------------------------EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC
T ss_pred ccc---------------------------------------CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc
Confidence 444 32211111100 0125566666666665666655
Q ss_pred --CCcCcCcEEEecCcccccccc-ccccCC---CCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccccccc
Q 036879 425 --GNLNNLTTLHLETNELTGSIP-KAIGRL---QKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDS 498 (1029)
Q Consensus 425 --~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 498 (1029)
.++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..++.
T Consensus 271 ~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 346 (520)
T 2z7x_B 271 SGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGH 346 (520)
T ss_dssp CSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCC
T ss_pred ccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhcc
Confidence 6677777777777777 233 444443 56777777777765332 1256667777777777777667777777
Q ss_pred ccccceeeccCccccC--CCCCCccCCCCCcEEEccCCcccCcCCc-cccccccccEEEccCCcCCCCCCccccCccccc
Q 036879 499 LISLRTLSLGFNRLTS--VIPSSLWSLRDILNVNLSSNSLNGTLPV-EIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQ 575 (1029)
Q Consensus 499 l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 575 (1029)
+++|++|+|++|++++ ..|..+..+++|+.|++++|.+++.+|. .+..+++|+.|++++|++++..|..+. ++|+
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~ 424 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK 424 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCC
T ss_pred CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCC
Confidence 7777777777777775 3445677777777777777777763443 466777777777777777766665554 6777
Q ss_pred ccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 576 HLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 576 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+++|.++
T Consensus 425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 7788888777 667666677788888888888774433447777778888888877776554
No 28
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.4e-48 Score=423.42 Aligned_cols=245 Identities=27% Similarity=0.376 Sum_probs=203.7
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 79999999997642 334567999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||++||+|.+++.+ .+.+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~-~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999999964 456999999999999999999999 77899999999999999999999999999998754322
Q ss_pred -ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 -MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 -~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
......+||+.|||||++ ++.++||||+||++|||++|+.||.+....+. ... ... ..
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-----~~~--------i~~----~~ 250 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI-----FAK--------IIK----LE 250 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHH--------HHH----TC
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHH--------HHc----CC
Confidence 233456899999999984 78899999999999999999999975311110 000 000 00
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..+++++.+++.+|+..||++|||++|+..+
T Consensus 251 ----~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 ----YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ----CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ----CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11123356778999999999999999999997543
No 29
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.7e-48 Score=413.95 Aligned_cols=243 Identities=24% Similarity=0.388 Sum_probs=188.2
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 368999999999999999999875 79999999997643 23356799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+ +|+|.+++.+ .+.+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHH-SCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 6899999865 456999999999999999999999 7789999999999999999999999999998764432
Q ss_pred CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.....+||+.|||||++ .+.++||||+||++|||++|+.||.+.... ..... ...
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-----~~~~~--------i~~----- 226 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-----VLFKN--------ISN----- 226 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHH-----
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------HHc-----
Confidence 22346799999999983 356899999999999999999999752111 10000 000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.....+..+++++.+++.+|++.||++|||++|++++
T Consensus 227 ---~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 227 ---GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ---CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0011123356778999999999999999999999985
No 30
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7e-47 Score=467.32 Aligned_cols=468 Identities=18% Similarity=0.219 Sum_probs=297.5
Q ss_pred CccceeccccccccCCCcccccCccccCeEec-cCCcCcccCCccccCC----CcCc--ccc----------cCCCcCcc
Q 036879 121 PKLEHLYLDGNSFIGTIPPSICNISSLLTLDL-SFNQLQGHVPSSILNI----PSLL--AID----------LSNNQFSG 183 (1029)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l----~~L~--~L~----------ls~N~l~~ 183 (1029)
..++.|+|++|.+.|.+|+.|++|++|++|+| ++|.+.|..|-..... +..+ .+. .....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 45777777777777777777777777777777 7777766544321111 0000 000 00000000
Q ss_pred cC-------CCCCCCCCcccccccccccchhcccc--ccccCCCCcccccccccceEEcccccccCC-------------
Q 036879 184 PM-------PSIYNTSPLQNIDMQYNSLAELHLAY--NQLSGQIPSTLFECKQLKILSLSVNNFIGS------------- 241 (1029)
Q Consensus 184 ~~-------~~~~~~~~l~~l~l~~~~L~~L~Ls~--N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~------------- 241 (1029)
.. +....... ...-.++.+.++. |++++ +|..|+++++|++|+|++|++++.
T Consensus 403 l~~~~l~~~~~~~~i~~-----~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~ 476 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKK-----DSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY 476 (876)
T ss_dssp HHHHHHHTCTTSCCCCC-----CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHH
T ss_pred HHHHHhhhCcccccccc-----ccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccccc
Confidence 00 00000000 0011233444443 77776 777777777888888888777762
Q ss_pred ----CCcccc--ccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcc-cCC-CCCchhhh
Q 036879 242 ----IPREIG--NITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANN-LLG-NLPSNIGH 313 (1029)
Q Consensus 242 ----~p~~~~--~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~lp~~~~~ 313 (1029)
+|..++ ++++|+ +|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..++.
T Consensus 477 ~~g~iP~~l~f~~L~~L~-----------------~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~ 539 (876)
T 4ecn_A 477 AKQYENEELSWSNLKDLT-----------------DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539 (876)
T ss_dssp HHHHTTSCCCGGGCTTCC-----------------EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred ccccCChhhhhccCCCCC-----------------EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh
Confidence 444443 443333 45555555555555555555555555555555 544 45554432
Q ss_pred ccc-------ccceEeecCcccCCCCCc--ccccccccceecCCCccccCCCCCCCCCCCCCccccccccccccccccee
Q 036879 314 SLP-------NLQQLILGGNRLTGPIPS--SISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKL 384 (1029)
Q Consensus 314 ~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L 384 (1029)
++ +|++|+|++|+++ .+|. .|.++ ++|+.|
T Consensus 540 -L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L---------------------------------------~~L~~L 578 (876)
T 4ecn_A 540 -LADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM---------------------------------------VKLGLL 578 (876)
T ss_dssp -HHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC---------------------------------------TTCCEE
T ss_pred -hhhcccccCCccEEEeeCCcCC-ccCChhhhhcC---------------------------------------CCCCEE
Confidence 33 5555555555555 4444 44444 455555
Q ss_pred eccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCc-CcEEEecCccccccccccccCCCC--CCEEEecc
Q 036879 385 ILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNN-LTTLHLETNELTGSIPKAIGRLQK--LQGLYLQH 461 (1029)
Q Consensus 385 ~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~ 461 (1029)
+|++|+++ .+| .+..+.+ |+.|+|++|+++ .+|..|.++++ |++|+|++|+|+ .+|..+..++. |+.|+|++
T Consensus 579 ~Ls~N~l~-~lp-~~~~L~~-L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 579 DCVHNKVR-HLE-AFGTNVK-LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp ECTTSCCC-BCC-CCCTTSE-ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred ECCCCCcc-cch-hhcCCCc-ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 55555555 444 4455444 566666666666 56666666666 777777777776 55666655543 77777777
Q ss_pred ccccCcccccc---c--CCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCC-------CCCcEE
Q 036879 462 NKLQGSITTDL---C--GLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSL-------RDILNV 529 (1029)
Q Consensus 462 N~l~~~~~~~~---~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-------~~L~~L 529 (1029)
|++.+.++... . .+++|+.|++++|+++...+..+..+++|+.|+|++|+|+.+.+..+... ++|+.|
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L 733 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTI 733 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEE
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEE
Confidence 77766544322 1 23477788888888875555555688899999999999985544444433 399999
Q ss_pred EccCCcccCcCCcccc--ccccccEEEccCCcCCCCCCccccCccccccccccc------ccccccCCccccCCCCCCEE
Q 036879 530 NLSSNSLNGTLPVEIG--NLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLAD------NKFQGSIPDSLGGLTSLNFL 601 (1029)
Q Consensus 530 ~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L 601 (1029)
+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|++|
T Consensus 734 ~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L 811 (876)
T 4ecn_A 734 DLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQL 811 (876)
T ss_dssp ECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEE
T ss_pred ECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEE
Confidence 99999999 6788887 99999999999999997 799999999999999976 88888999999999999999
Q ss_pred eCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC-CCCCccCcccccCCCCC--CCCCCC
Q 036879 602 DMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPFTNLSSQSFVGNKGL--CGAPEL 662 (1029)
Q Consensus 602 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~--c~~~~~ 662 (1029)
+|++|+| +.+|..+. ++|+.|+|++|++....+.. .+........+.+|++. ||||..
T Consensus 812 ~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~~L 872 (876)
T 4ecn_A 812 QIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDAL 872 (876)
T ss_dssp ECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCGGG
T ss_pred ECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCCCc
Confidence 9999999 57887765 69999999999998644321 11223344556666655 477643
No 31
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.8e-48 Score=435.03 Aligned_cols=246 Identities=22% Similarity=0.282 Sum_probs=205.7
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999976 79999999998776666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCcee
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQ 896 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 896 (1029)
+||+|.+++.. ..+++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..... ..
T Consensus 231 ~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 99999999854 45899999999999999999999 77899999999999999999999999999998754432 23
Q ss_pred ccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhh
Q 036879 897 TQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAY 972 (1029)
Q Consensus 897 ~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 972 (1029)
...+||+.|||||++ ++.++||||+||++|||++|+.||.+....+. ... +..... ..
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~--------i~~~~~--------~~ 366 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKM--------IRDNLP--------PR 366 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHH--------HHHSCC--------CC
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHH--------HHcCCC--------CC
Confidence 446799999999984 78899999999999999999999975311110 000 000000 00
Q ss_pred hHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 973 LTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 973 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++.++.+++.+||..||++|||++|++++
T Consensus 367 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122356788999999999999999999999885
No 32
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-47 Score=413.19 Aligned_cols=242 Identities=25% Similarity=0.404 Sum_probs=194.5
Q ss_pred CCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEec----CCeEEEEE
Q 036879 741 SENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSS----DHFKALVL 813 (1029)
Q Consensus 741 ~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 813 (1029)
++.++||+|+||+||+|++. +++.||+|++.... ....+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999875 78999999997543 3345679999999999999999999999865 35679999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEEC-CCCcEEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLN-ESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~ 890 (1029)
|||++|+|.+++.+ ...+++..+..++.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999964 456899999999999999999999 666 99999999999998 489999999999986433
Q ss_pred CCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. .....+||+.|||||++ ++.++|||||||++|||+||+.||.+...... +...+. . ..
T Consensus 185 ~---~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~~~~i~-----------~-~~-- 246 (290)
T 3fpq_A 185 S---FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVT-----------S-GV-- 246 (290)
T ss_dssp T---SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHT-----------T-TC--
T ss_pred C---ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-HHHHHH-----------c-CC--
Confidence 2 22346799999999984 78899999999999999999999965321111 000000 0 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.....+..+++++.+++.+||+.||++|||++|++++
T Consensus 247 ---~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 ---KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0011122345678999999999999999999999874
No 33
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.7e-48 Score=428.09 Aligned_cols=262 Identities=22% Similarity=0.375 Sum_probs=212.3
Q ss_pred HHHHHHhCCCCCCceeccCcceEEEEEEecC------CcEEEEEEeecccc-hhhHHHHHHHHHHhcCCC-CceEEEEEE
Q 036879 731 QELFRATDGFSENNLLGKGSFGSVYKGTLSD------GMQIAVKVFNLELE-GTLRSFDAECEILGSIRH-RNLVKIIST 802 (1029)
Q Consensus 731 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l~~~ 802 (1029)
.+++...++|++.+.||+|+||+||+|++.. ++.||||.++.... ...+.|.+|++++++++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 4555677889999999999999999998642 46799999976543 345679999999999965 899999999
Q ss_pred Eec-CCeEEEEEeccCCCCHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCC
Q 036879 803 CSS-DHFKALVLEYMPNGSLENWMYNK---------------NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNP 866 (1029)
Q Consensus 803 ~~~-~~~~~lV~E~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~ 866 (1029)
|.+ ++..++|||||++|+|.++++.. ...+++..+..++.|||+||+||| +++||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 976 45689999999999999999753 234889999999999999999999 67799999999
Q ss_pred CCEEECCCCcEEEEccCCceecCCCCC-ceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccc
Q 036879 867 SNILLNESMVACLSDFGISKLLGDETS-MTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFV 940 (1029)
Q Consensus 867 ~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~ 940 (1029)
+|||+++++.+||+|||+|+....... .......||+.|||||+ .++.++|||||||++|||+| |+.||.+...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433 23345678999999998 47889999999999999998 8999976321
Q ss_pred cccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 941 GEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.+. +. ..+. . ......|..+++++.+++.+||+.||++|||++|++++|+.+.+.
T Consensus 294 ~~~-~~------------~~i~----~--g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 294 DEE-FC------------RRLK----E--GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SHH-HH------------HHHH----H--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HH------------HHHH----c--CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 111 10 0110 0 011223345678899999999999999999999999999988654
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.3e-47 Score=451.64 Aligned_cols=456 Identities=20% Similarity=0.211 Sum_probs=369.8
Q ss_pred ceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccc
Q 036879 124 EHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNS 203 (1029)
Q Consensus 124 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~ 203 (1029)
++|++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-------------------- 59 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY-------------------- 59 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCE--------------------
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCC--------------------
Confidence 46788888888 5777666 788888888888886666788888888888777777653
Q ss_pred cchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccC-C
Q 036879 204 LAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTG-V 282 (1029)
Q Consensus 204 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~-~ 282 (1029)
..|..|.++++|++|+|++|+++ .+|.. .+ ++|++|+|++|++++ .
T Consensus 60 -------------~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l-----------------~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 60 -------------LDISVFKFNQELEYLDLSHNKLV-KISCH--PT-----------------VNLKHLDLSFNAFDALP 106 (520)
T ss_dssp -------------EEGGGGTTCTTCCEEECCSSCCC-EEECC--CC-----------------CCCSEEECCSSCCSSCC
T ss_pred -------------cChHHhhcccCCCEEecCCCcee-ecCcc--cc-----------------CCccEEeccCCcccccc
Confidence 34567777888888888888877 45543 33 345578888888886 3
Q ss_pred CCCCcccCCCCcEEEccCcccCCCCCchhhhccccc--ceEeecCccc--CCCCCccccccc-ccceecCCCccccCCCC
Q 036879 283 IPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNL--QQLILGGNRL--TGPIPSSISNAS-MLTLIDMPYNLFSGFIP 357 (1029)
Q Consensus 283 ~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~-~L~~L~ls~N~l~~~~p 357 (1029)
+|..|.++++|++|+|++|.+.+ .. +..+++| ++|+|++|++ .+..|..+..+. ....+++++|.+.+.++
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~~---~~-~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~ 182 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLEK---SS-VLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFIL 182 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCCG---GG-GGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCC
T ss_pred chhhhccCCcceEEEecCcccch---hh-ccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhh
Confidence 67888999999999999998864 22 3357777 9999999999 788888888876 45567888888876655
Q ss_pred CCCCCCCCCcccccccccccccccceeeccCCc-------CCCCCCccccCchhhhcceeccccccccccccccC---Cc
Q 036879 358 NSLGFCHPYDELGFLTSLTNCKDLRKLILSENP-------LSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIG---NL 427 (1029)
Q Consensus 358 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~---~l 427 (1029)
.. .+..+++|+.|++++|. +.+.+| .+..+.. ++.|++++|.+++..+..+. ..
T Consensus 183 ~~--------------~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~-L~~L~l~~~~l~~~~~~~~~~~~~~ 246 (520)
T 2z7x_B 183 DV--------------SVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPK-LSNLTLNNIETTWNSFIRILQLVWH 246 (520)
T ss_dssp CC--------------CCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTT-CCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred hh--------------hhhcccceeeccccccccccccceeecchh-hhccccc-hhhccccccccCHHHHHHHHHHhhh
Confidence 43 24578899999999997 666555 6777776 99999999998864333222 24
Q ss_pred CcCcEEEecCccccccccccc-----cCCCCCCEEEeccccccCcccccccCC---CCCcEEecCCCcccCccccccccc
Q 036879 428 NNLTTLHLETNELTGSIPKAI-----GRLQKLQGLYLQHNKLQGSITTDLCGL---RSLSEFYSDGNELNGSLPQCLDSL 499 (1029)
Q Consensus 428 ~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l 499 (1029)
++|++|++++|++++.+|..+ ..+++|+.+++++|.+ ..+...+..+ .+|+.|++++|.+.... .+..+
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l 323 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKI 323 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhC
Confidence 689999999999998899888 8999999999999999 3433445444 67999999999987543 23788
Q ss_pred cccceeeccCccccCCCCCCccCCCCCcEEEccCCcccC--cCCccccccccccEEEccCCcCCCCCCc-cccCcccccc
Q 036879 500 ISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNG--TLPVEIGNLKVVTKIDLSRNDLSGEIPS-SIGDLKNMQH 576 (1029)
Q Consensus 500 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~ 576 (1029)
++|++|++++|++++..|..+..+++|+.|+|++|++++ ..|..++.+++|++|++++|++++.+|. .+..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 999999999999999899999999999999999999997 5567899999999999999999985665 5889999999
Q ss_pred cccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC-CCCCCccCcccccCCCC
Q 036879 577 LSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH-GGPFTNLSSQSFVGNKG 655 (1029)
Q Consensus 577 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~~~~~~n~~ 655 (1029)
|+|++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|+.|++++|++++.++. ...+.++..+.+.+||+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCC
Confidence 99999999988887775 79999999999999 7788777999999999999999965444 45677888999999999
Q ss_pred CCCCCC
Q 036879 656 LCGAPE 661 (1029)
Q Consensus 656 ~c~~~~ 661 (1029)
.|+|+.
T Consensus 481 ~c~c~~ 486 (520)
T 2z7x_B 481 DCSCPR 486 (520)
T ss_dssp CCCHHH
T ss_pred cccCCc
Confidence 998863
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-47 Score=416.34 Aligned_cols=244 Identities=25% Similarity=0.307 Sum_probs=192.6
Q ss_pred CCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
++|++.+.||+|+||+||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999862 47889999997643 2234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||++||+|.+++.+ .+.+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999999965 456999999999999999999999 778999999999999999999999999999865443
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.. .....+||+.|||||++ ++.++||||+||++|||+||+.||.+....+. .. .... .
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-----~~--------~i~~----~ 241 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-----MT--------MILK----A 241 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HH--------HHHH----C
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-----HH--------HHHc----C
Confidence 22 22346799999999983 78899999999999999999999975321110 00 0000 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH-----HHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI-----KEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~evl~~ 1007 (1029)
....|..+++++.+++.+||+.||++|||+ +|++++
T Consensus 242 ----~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 242 ----KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ----CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 011223457789999999999999999984 677653
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.8e-45 Score=448.01 Aligned_cols=555 Identities=19% Similarity=0.193 Sum_probs=381.9
Q ss_pred hhHHHHHHHHHHhccCCCCCcccCCCCCCCCCCcee----eEEEcCC---------CCceEEEecccccccccCCccCCC
Q 036879 4 GRDQSALLALKAHVTNDPLNVLASNWSTNTSVCNWF----GVTCSPR---------HRRVTALNLAYMGLLGTIPPELGN 70 (1029)
Q Consensus 4 ~~~~~al~~~~~~~~~~~~~~~~~~w~~~~~~c~w~----gv~c~~~---------~~~v~~l~l~~~~l~~~~p~~~~~ 70 (1029)
..|-++|.+.-.++ |. + |. +|.|. -|.|... ...++.|||++|+|.+-.|..|.+
T Consensus 7 ~~~~~~~~~~~~~~---p~----~-~~----~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~ 74 (635)
T 4g8a_A 7 KDDDDKLAAANSSI---PE----S-WE----PCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFS 74 (635)
T ss_dssp --------------------------C----CSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCcchhhcccCCC---CC----C-CC----CccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhC
Confidence 44556665555544 32 3 64 45553 4668632 136899999999999655668999
Q ss_pred CcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeE
Q 036879 71 LSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTL 150 (1029)
Q Consensus 71 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 150 (1029)
+++|++|||++|+|++..|.+|+++++|++|+|++|+|+.++ +..|..+++|++|+|++|++++..+..|+++++|++|
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~-~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L 153 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA-LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 153 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC-GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC-HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCee
Confidence 999999999999999777888999999999999999999642 4578999999999999999997666789999999999
Q ss_pred eccCCcCcc-cCCccccCCCcCcccccCCCcCcccCCCCCC-CCCcccccccccccchhccccccccCCCCccccccccc
Q 036879 151 DLSFNQLQG-HVPSSILNIPSLLAIDLSNNQFSGPMPSIYN-TSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQL 228 (1029)
Q Consensus 151 ~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L 228 (1029)
+|++|++++ .+|..+.++++|++|++++|+|++..+..+. +..++ .....++++.|.++...+..+ ....+
T Consensus 154 ~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~------~~~~~~~ls~n~l~~i~~~~~-~~~~~ 226 (635)
T 4g8a_A 154 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP------LLNLSLDLSLNPMNFIQPGAF-KEIRL 226 (635)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT------TCCCEEECTTCCCCEECTTTT-TTCEE
T ss_pred ccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhh------hhhhhhhcccCcccccCcccc-cchhh
Confidence 999999975 4688899999999999999999887664331 11111 122345667777765444433 34456
Q ss_pred ceEEcccccccCCC-CccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCC
Q 036879 229 KILSLSVNNFIGSI-PREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNL 307 (1029)
Q Consensus 229 ~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~l 307 (1029)
+.|++++|.....+ +..+..+..++...+..+... ....+....+..+..+..+..+++..+......
T Consensus 227 ~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~-----------~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 295 (635)
T 4g8a_A 227 HKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR-----------NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 295 (635)
T ss_dssp EEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCT-----------TSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCE
T ss_pred hhhhhhcccccccccchhhcCCcccccccccccccc-----------cccccccccccccccccchhhhhhhhhhhcccc
Confidence 67777776544222 233444544443332211111 112233334445555555655555544332111
Q ss_pred Cc--hhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceee
Q 036879 308 PS--NIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLI 385 (1029)
Q Consensus 308 p~--~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~ 385 (1029)
.. ..+..+.+++.+.+.+|.+.... .+.. ...|+.|+
T Consensus 296 ~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~---------------------------------------~~~L~~L~ 334 (635)
T 4g8a_A 296 DGIIDLFNCLTNVSSFSLVSVTIERVK--DFSY---------------------------------------NFGWQHLE 334 (635)
T ss_dssp EECTTTTGGGTTCSEEEEESCEEEECG--GGGS---------------------------------------CCCCSEEE
T ss_pred cchhhhhhhhccccccccccccccccc--cccc---------------------------------------chhhhhhh
Confidence 10 11223445555555555554221 1222 34455555
Q ss_pred ccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccc--cccccccCCCCCCEEEecccc
Q 036879 386 LSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTG--SIPKAIGRLQKLQGLYLQHNK 463 (1029)
Q Consensus 386 Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~ 463 (1029)
+++|.+.+..+..+. .++.+++..|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|++|++..|.
T Consensus 335 l~~~~~~~~~~~~l~----~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~ 408 (635)
T 4g8a_A 335 LVNCKFGQFPTLKLK----SLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNG 408 (635)
T ss_dssp EESCEESSCCCCBCT----TCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCS
T ss_pred cccccccCcCcccch----hhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccc
Confidence 555555533332222 145566666655432 234467778888888887753 345556677788888888887
Q ss_pred ccCcccccccCCCCCcEEecCCCcccCcc-ccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCccc-CcCC
Q 036879 464 LQGSITTDLCGLRSLSEFYSDGNELNGSL-PQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLN-GTLP 541 (1029)
Q Consensus 464 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p 541 (1029)
+.. .+..+..+++|+.+++..|+..... +..|..+++++.++++.|.+++..+..+..++.|+.|+|++|.+. +..|
T Consensus 409 ~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~ 487 (635)
T 4g8a_A 409 VIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 487 (635)
T ss_dssp EEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCc
Confidence 753 4456777788888888777665443 456788899999999999999888899999999999999999754 4678
Q ss_pred ccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcc-c
Q 036879 542 VEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKAL-S 620 (1029)
Q Consensus 542 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~ 620 (1029)
..|..+++|+.|||++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|||++|+|++.+|..+..+ +
T Consensus 488 ~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 567 (635)
T 4g8a_A 488 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567 (635)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCT
T ss_pred hhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhC
Confidence 889999999999999999998889999999999999999999998888889999999999999999999999999888 6
Q ss_pred ccceeeccCCCCcCCCC
Q 036879 621 LLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 621 ~L~~L~l~~N~l~~~~~ 637 (1029)
+|+.|+|++|+|+|.+.
T Consensus 568 ~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 568 SLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCCEEECTTCCBCCSGG
T ss_pred cCCEEEeeCCCCcccCC
Confidence 89999999999998764
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.8e-45 Score=400.24 Aligned_cols=245 Identities=22% Similarity=0.373 Sum_probs=184.4
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCceEEEEEEEecCC--------
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-GTLRSFDAECEILGSIRHRNLVKIISTCSSDH-------- 807 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 807 (1029)
.+|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999975 799999999976543 34567899999999999999999999986543
Q ss_pred ----eEEEEEeccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEc
Q 036879 808 ----FKALVLEYMPNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSD 881 (1029)
Q Consensus 808 ----~~~lV~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~D 881 (1029)
..|+||||+++|+|.+++..... ..++..+..++.||++||+||| ++|||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999965432 3456678899999999999999 77899999999999999999999999
Q ss_pred cCCceecCCCCCc-----------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccc
Q 036879 882 FGISKLLGDETSM-----------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLK 946 (1029)
Q Consensus 882 fg~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~ 946 (1029)
||+|+........ ..+..+||+.|||||++ ++.++||||+||++|||++ ||...... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~----~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER----V 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH----H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH----H
Confidence 9999876533211 12335799999999983 6889999999999999996 77531100 0
Q ss_pred hhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 947 SRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 947 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. .+....... ..+.....++.+.+++.+||+.||++|||+.|++++
T Consensus 235 ~--------~~~~~~~~~-------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 R--------TLTDVRNLK-------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp H--------HHHHHHTTC-------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H--------HHHHHhcCC-------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 000111100 111223345567889999999999999999999874
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-44 Score=435.68 Aligned_cols=459 Identities=20% Similarity=0.191 Sum_probs=300.1
Q ss_pred CeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccC
Q 036879 75 SLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSF 154 (1029)
Q Consensus 75 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 154 (1029)
+++|+++|+++ .+|..+. ++|++|+|++|+++.+. |..|..+++|++|+|++|++++..|..|.++++|++|||++
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 56666666666 4555442 55566666666555321 34555555555555555555544455555555555555555
Q ss_pred CcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccC-CCCcccccccccceEEc
Q 036879 155 NQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSG-QIPSTLFECKQLKILSL 233 (1029)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L 233 (1029)
|+++ .+|.. .+++|++|++++|+ +++ .+|..|+++++|++|+|
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~---------------------------------l~~l~~p~~~~~l~~L~~L~L 153 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFND---------------------------------FDVLPVCKEFGNLTKLTFLGL 153 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSC---------------------------------CSBCCCCGGGGGCTTCCEEEE
T ss_pred CcCC-ccCcc--ccccCCEEECCCCC---------------------------------ccccCchHhhcccCcccEEec
Confidence 5555 34443 44444444444444 443 24678888999999999
Q ss_pred ccccccCCCCccccccccccceeecccccccccCcccEEEccCCcc--cCCCCCCcccCC-CCcEEEccCcccCCCCCch
Q 036879 234 SVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRL--TGVIPPEIINIS-SLTVLSLTANNLLGNLPSN 310 (1029)
Q Consensus 234 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~lp~~ 310 (1029)
++|++++ ..+..+++| +|+.|+|++|++ ++..|..+..+. ..-.++++.|.+.+.++..
T Consensus 154 ~~n~l~~---~~~~~l~~L---------------~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~ 215 (562)
T 3a79_B 154 SAAKFRQ---LDLLPVAHL---------------HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNM 215 (562)
T ss_dssp ECSBCCT---TTTGGGTTS---------------CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEE
T ss_pred CCCcccc---Cchhhhhhc---------------eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhh
Confidence 9998875 234444433 236788888888 777888887765 2225688888888777777
Q ss_pred hhhcccccceEeecCcccCC----CCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeec
Q 036879 311 IGHSLPNLQQLILGGNRLTG----PIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLIL 386 (1029)
Q Consensus 311 ~~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~L 386 (1029)
.+..+++|+.|++++|+... ..+..+.. +++|+.|++
T Consensus 216 ~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~---------------------------------------l~~L~~L~L 256 (562)
T 3a79_B 216 SVNALGHLQLSNIKLNDENCQRLMTFLSELTR---------------------------------------GPTLLNVTL 256 (562)
T ss_dssp EESSEEEEEEEEEECCSTTHHHHHHHHHHHHS---------------------------------------CSSCEEEEE
T ss_pred cccccceEEEecccccccccchHHHHHHHHhc---------------------------------------cCcceEEEe
Confidence 77778888888888875210 01122333 344444444
Q ss_pred cCCcCCCCC----CccccCchhhhcceecccccccccccccc-----CCcCcCcEEEecCccccccccccccC---CCCC
Q 036879 387 SENPLSGVL----PISIGNLSNAMDVLYLSACNIKGSIPSEI-----GNLNNLTTLHLETNELTGSIPKAIGR---LQKL 454 (1029)
Q Consensus 387 s~N~l~~~~----p~~~~~l~~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~---l~~L 454 (1029)
+++.+.+.. +..+. .. .|++|++++|++++.+|..+ .+++.|+.++++.|.+. ..+..+.. ..+|
T Consensus 257 ~~~~l~~~~~~~~~~~~~-~~-~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~-~p~~~~~~~~~~~~L 333 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFW-PR-PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFL-FSKEALYSVFAEMNI 333 (562)
T ss_dssp EEEEECHHHHHHHHHHHT-TS-SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCS-SCHHHHHHHHHTCCC
T ss_pred cCCcCcHHHHHHHHHhhh-cc-cccEEEEeccEeeccccchhhhcccccchheehhhcccceee-cChhhhhhhhccCcc
Confidence 444433211 11111 11 36677777777776666666 66777777777777762 22233322 2578
Q ss_pred CEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCC--CCCccCCCCCcEEEcc
Q 036879 455 QGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVI--PSSLWSLRDILNVNLS 532 (1029)
Q Consensus 455 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls 532 (1029)
++|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|+|++|+++++. |..+..+++|+.|+++
T Consensus 334 ~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~ 411 (562)
T 3a79_B 334 KMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVS 411 (562)
T ss_dssp SEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECT
T ss_pred eEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECC
Confidence 88888888875322 1256778888888888888777888888888888888888887643 4567888888888888
Q ss_pred CCcccCcCC-ccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCc
Q 036879 533 SNSLNGTLP-VEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 533 ~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
+|++++.+| ..+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++.
T Consensus 412 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l 488 (562)
T 3a79_B 412 LNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSV 488 (562)
T ss_dssp TSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCC
T ss_pred CCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCC
Confidence 888887344 4577788888888888888776666554 67888888888888 6776666888888888888888844
Q ss_pred CchhhhcccccceeeccCCCCcCCCCC
Q 036879 612 IPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 612 ~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
.+..+..+++|+.|++++|+++|.++.
T Consensus 489 ~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 489 PDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 444488888888888888888876653
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.9e-44 Score=429.95 Aligned_cols=463 Identities=21% Similarity=0.214 Sum_probs=304.0
Q ss_pred EEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceecccc
Q 036879 51 TALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDG 130 (1029)
Q Consensus 51 ~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~ 130 (1029)
+.++++++++. .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|+++.+ .|..|..+++|++|+|++
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSL-DFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEE-CTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcC-CHHHhCCCCCCCEEECCC
Confidence 67999999999 5998775 8999999999999988888999999999999999999964 378899999999999999
Q ss_pred ccccCCCcccccCccccCeEeccCCcCcc-cCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhcc
Q 036879 131 NSFIGTIPPSICNISSLLTLDLSFNQLQG-HVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHL 209 (1029)
Q Consensus 131 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~L 209 (1029)
|+++ .+|.. .+++|++|+|++|++++ .+|..|.++++|++|++++|++++.. +..... -+|++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~--~~~l~~--------L~L~~L~L 176 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD--LLPVAH--------LHLSCILL 176 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT--TGGGTT--------SCEEEEEE
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc--hhhhhh--------ceeeEEEe
Confidence 9999 68877 89999999999999996 34689999999999999999887421 111100 02344555
Q ss_pred ccccc--cCCCCccccccc--ccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCC
Q 036879 210 AYNQL--SGQIPSTLFECK--QLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPP 285 (1029)
Q Consensus 210 s~N~l--~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~ 285 (1029)
++|++ ++..|..+..+. .| .+++++|.+.+.+++.
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~---------------------------------------- 215 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNM---------------------------------------- 215 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEE----------------------------------------
T ss_pred ecccccccccCcccccccCcceE-EEEecCccchhhhhhh----------------------------------------
Confidence 55555 444444444433 22 3344444444333321
Q ss_pred CcccCCCCcEEEccCcc-----cCCCCCchhhhcccccceEeecCcccCCCCCcc---cccccccceecCCCccccCCCC
Q 036879 286 EIINISSLTVLSLTANN-----LLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSS---ISNASMLTLIDMPYNLFSGFIP 357 (1029)
Q Consensus 286 ~~~~l~~L~~L~Ls~N~-----l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~l~~L~~L~ls~N~l~~~~p 357 (1029)
.+.++++|+.|++++|. +.+. +..+ ..+++|+.|+|+++.+.+..... ....++|++|++++|.+.+.+|
T Consensus 216 ~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l-~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip 293 (562)
T 3a79_B 216 SVNALGHLQLSNIKLNDENCQRLMTF-LSEL-TRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERID 293 (562)
T ss_dssp EESSEEEEEEEEEECCSTTHHHHHHH-HHHH-HSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCC
T ss_pred cccccceEEEecccccccccchHHHH-HHHH-hccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeecccc
Confidence 22334444444444442 1101 1111 12444444444444433210000 0001133333333333333333
Q ss_pred CCCCCCCCCcccccccccccccccceeeccCCcCCCCCC-ccccCchhhhcceeccccccccccccccCCcCcCcEEEec
Q 036879 358 NSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLP-ISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLE 436 (1029)
Q Consensus 358 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 436 (1029)
..+.. .....++.|+.++++.|.+ .+| ..+..+. ...+|++|+++
T Consensus 294 ~~~~~----------~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~----------------------~~~~L~~L~l~ 339 (562)
T 3a79_B 294 REEFT----------YSETALKSLMIEHVKNQVF--LFSKEALYSVF----------------------AEMNIKMLSIS 339 (562)
T ss_dssp CCCCC----------CCSCSCCEEEEEEEEECCC--SSCHHHHHHHH----------------------HTCCCSEEEEE
T ss_pred chhhh----------cccccchheehhhccccee--ecChhhhhhhh----------------------ccCcceEEEcc
Confidence 22100 0012344455555555544 222 1111110 11346666666
Q ss_pred CccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccC--ccccccccccccceeeccCccccC
Q 036879 437 TNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNG--SLPQCLDSLISLRTLSLGFNRLTS 514 (1029)
Q Consensus 437 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (1029)
+|.+.... .+..+++|++|++++|++++..+..+..+++|++|++++|++++ ..|..|..+++|++|++++|++++
T Consensus 340 ~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 340 DTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred CCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 66654211 12456666666666666666666666666666666666666665 335678888999999999999987
Q ss_pred -CCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCcc-c
Q 036879 515 -VIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDS-L 592 (1029)
Q Consensus 515 -~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-~ 592 (1029)
+.+..+..+++|+.|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++ +|.. +
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~ 493 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVF 493 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTST
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHH
Confidence 5555688899999999999999877776654 78999999999998 677777799999999999999994 5555 8
Q ss_pred cCCCCCCEEeCcCCcccCcCc
Q 036879 593 GGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 593 ~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
..+++|++|+|++|++++..+
T Consensus 494 ~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 494 DRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTCTTCCCEECCSCCBCCCHH
T ss_pred hcCCCCCEEEecCCCcCCCcc
Confidence 999999999999999997655
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-44 Score=404.51 Aligned_cols=265 Identities=22% Similarity=0.271 Sum_probs=198.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEec------CC
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSS------DH 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 807 (1029)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999975 79999999997543 3345678899999999999999999998754 36
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..|+|||||+ |+|.+++.. .+.+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999995 689999854 567999999999999999999999 77899999999999999999999999999987
Q ss_pred cCCCC---CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc---cc--
Q 036879 888 LGDET---SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS---LH-- 954 (1029)
Q Consensus 888 ~~~~~---~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~-- 954 (1029)
+.... .......+||+.|||||++ ++.++||||+||++|||++|++||.+....+. +....... ..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~-l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ-LQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCChHH
Confidence 64321 2223346899999999983 47789999999999999999999975321110 00000000 00
Q ss_pred ------hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 955 ------GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 955 ------~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+..................+.++.+++.+|+..||++|||++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000000000000000001112245678999999999999999999999985
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.2e-43 Score=393.81 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=166.3
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 809 (1029)
...++|++.+.||+|+||+||+|+.+ +++.||||.+.... ....+.+|+++++.+ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34678999999999999999999753 46889999986543 345678999999998 699999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC-CcEEEEccCCceec
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES-MVACLSDFGISKLL 888 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~-~~~kl~Dfg~a~~~ 888 (1029)
|+||||+++|+|.+++. .+++.++..++.|++.||+||| ++|||||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999883 4899999999999999999999 7789999999999999876 89999999999865
Q ss_pred CCCCCc---------------------------eeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCC
Q 036879 889 GDETSM---------------------------TQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTD 936 (1029)
Q Consensus 889 ~~~~~~---------------------------~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~ 936 (1029)
...... .....+||+.|||||++ ++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 432110 11234799999999973 5778999999999999999999996
Q ss_pred c
Q 036879 937 E 937 (1029)
Q Consensus 937 ~ 937 (1029)
.
T Consensus 249 ~ 249 (361)
T 4f9c_A 249 K 249 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-42 Score=384.47 Aligned_cols=225 Identities=30% Similarity=0.549 Sum_probs=182.8
Q ss_pred CCchhHHHHHHHHHHhccCCCCCcccCCCCCCCCCCc--eeeEEEcCCC--CceEEEecccccccc--cCCccCCCCcCC
Q 036879 1 TNVGRDQSALLALKAHVTNDPLNVLASNWSTNTSVCN--WFGVTCSPRH--RRVTALNLAYMGLLG--TIPPELGNLSFL 74 (1029)
Q Consensus 1 ~~~~~~~~al~~~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~~--~~p~~~~~l~~L 74 (1029)
+|.+.|++||++||+++. ||. .+++ |..++|||+ |.||+|+..+ ++|+.|+|+++++.| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~-W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSS-WLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTT-CCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccC-CCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 478999999999999995 665 7777 988889999 9999998765 899999999999999 999999999999
Q ss_pred CeEeccC-cccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEecc
Q 036879 75 SLLNVTN-NSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLS 153 (1029)
Q Consensus 75 ~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 153 (1029)
++|+|++ |.+++.+|..|+++++|++|+|++|+++. .+|..+..+++|++|+|++|++++.+|..+..+++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG-AIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEE-ECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCC-cCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 9999995 99999999999999999999999999985 468889999999999999999999999999999999999999
Q ss_pred CCcCcccCCccccCCC-cCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEE
Q 036879 154 FNQLQGHVPSSILNIP-SLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILS 232 (1029)
Q Consensus 154 ~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 232 (1029)
+|++++.+|..+.+++ +|++|++++|++++..|..+.. ..|++|+|++|++++.+|..|..+++|++|+
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~----------l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN----------LNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG----------CCCSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC----------CcccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 9999988999998887 7888888888777554432211 0144444444444444444444444444444
Q ss_pred ccccccc
Q 036879 233 LSVNNFI 239 (1029)
Q Consensus 233 Ls~N~l~ 239 (1029)
|++|+++
T Consensus 228 L~~N~l~ 234 (313)
T 1ogq_A 228 LAKNSLA 234 (313)
T ss_dssp CCSSEEC
T ss_pred CCCCcee
Confidence 4444444
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.7e-42 Score=412.63 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=207.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999875 7999999999877666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC--CcEEEEccCCceecCCCCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES--MVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 893 (1029)
|+||+|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999777778999999999999999999999 7779999999999999854 8999999999998755432
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
....+||+.|||||++ ++.++||||+||++|||++|+.||.+....+. + . .+.. ...
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~----~--------~i~~----~~~ 373 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-L----R--------NVKS----CDW 373 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-H----H--------HHHT----TCC
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-H----H--------HHHh----CCC
Confidence 2345799999999984 56789999999999999999999976321111 0 0 0000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.........++.++.++|.+||..||++|||+.|+++|
T Consensus 374 ~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 374 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00011122346778999999999999999999999874
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-42 Score=407.47 Aligned_cols=246 Identities=19% Similarity=0.273 Sum_probs=198.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHH---HHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSF---DAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ......+ ..++.+++.++|||||+++++|++.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999976 79999999997542 1112223 3446778888999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|+||||++||+|.+++.+ .+.+++..+..++.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~-~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999965 456999999999999999999999 8889999999999999999999999999998775
Q ss_pred CCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
.... ...+||+.|||||++ ++.++||||+||++|||++|++||.+...... ..... ...
T Consensus 344 ~~~~---~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~--------~i~--- 407 (689)
T 3v5w_A 344 KKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDR--------MTL--- 407 (689)
T ss_dssp SCCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHH--------HHH---
T ss_pred CCCC---CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHH--------hhc---
Confidence 4322 335799999999984 57789999999999999999999975322111 00000 000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCC-----HHHHHHH
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERIN-----IKEALTK 1007 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~~ 1007 (1029)
......+..++.++.+++.+|+..||++|++ ++||.+|
T Consensus 408 -----~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 408 -----TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp -----HCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred -----CCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0001122345778999999999999999998 7888764
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.8e-41 Score=394.99 Aligned_cols=420 Identities=24% Similarity=0.296 Sum_probs=254.0
Q ss_pred ccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCccc
Q 036879 95 LRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAI 174 (1029)
Q Consensus 95 l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 174 (1029)
.++|++|++++|++. ++|+.++.+++|++|++++|+++|.+|..++++++|+.++++.|.. .++++|
T Consensus 10 ~~~L~~L~l~~n~l~--~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 10 NTFLQEPLRHSSNLT--EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred cccchhhhcccCchh--hCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 467777888888774 5677777778888888888877777777777777776666655542 245666
Q ss_pred ccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccc
Q 036879 175 DLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKG 254 (1029)
Q Consensus 175 ~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 254 (1029)
++++|++++.+.. . .+|++|++++|++++ +|.. +++|++|++++|++++ +|.
T Consensus 77 ~l~~~~l~~lp~~-~------------~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~---------- 128 (454)
T 1jl5_A 77 ELNNLGLSSLPEL-P------------PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD---------- 128 (454)
T ss_dssp ECTTSCCSCCCSC-C------------TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS----------
T ss_pred EecCCccccCCCC-c------------CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccC----------
Confidence 6666666654321 0 135555666666665 4432 3667777777776653 221
Q ss_pred eeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCc
Q 036879 255 LYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPS 334 (1029)
Q Consensus 255 L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (1029)
..++|++|+|++|++++ +| ++.++++|++|++++|++. .+|.. ..+|++|++++|++++ +|
T Consensus 129 ----------~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~-~lp~~----~~~L~~L~L~~n~l~~-l~- 189 (454)
T 1jl5_A 129 ----------LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK-KLPDL----PPSLEFIAAGNNQLEE-LP- 189 (454)
T ss_dssp ----------CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSS-CC-
T ss_pred ----------CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc-ccCCC----cccccEEECcCCcCCc-Cc-
Confidence 11467799999999996 66 6999999999999999997 57754 3589999999999997 55
Q ss_pred ccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccc
Q 036879 335 SISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSAC 414 (1029)
Q Consensus 335 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n 414 (1029)
.+.++++|+.|++++|.+++ +|.. .++|++|++++|++. .+| .++.+.+ |++|++++|
T Consensus 190 ~~~~l~~L~~L~l~~N~l~~-l~~~------------------~~~L~~L~l~~n~l~-~lp-~~~~l~~-L~~L~l~~N 247 (454)
T 1jl5_A 190 ELQNLPFLTAIYADNNSLKK-LPDL------------------PLSLESIVAGNNILE-ELP-ELQNLPF-LTTIYADNN 247 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSS-CCCC------------------CTTCCEEECCSSCCS-SCC-CCTTCTT-CCEEECCSS
T ss_pred cccCCCCCCEEECCCCcCCc-CCCC------------------cCcccEEECcCCcCC-ccc-ccCCCCC-CCEEECCCC
Confidence 68999999999999999875 3321 247899999999988 666 4777776 899999999
Q ss_pred ccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccc
Q 036879 415 NIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQ 494 (1029)
Q Consensus 415 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 494 (1029)
++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++.... .++|+.|++++|++++.
T Consensus 248 ~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~----~~~L~~L~l~~N~l~~i--- 312 (454)
T 1jl5_A 248 LLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSEL----PPNLYYLNASSNEIRSL--- 312 (454)
T ss_dssp CCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCC----CTTCCEEECCSSCCSEE---
T ss_pred cCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCc----CCcCCEEECcCCcCCcc---
Confidence 9985 4543 3789999999999985 5543 37899999999998763321 26888899999988752
Q ss_pred ccccc-cccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCC--CCCccccCc
Q 036879 495 CLDSL-ISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSG--EIPSSIGDL 571 (1029)
Q Consensus 495 ~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l 571 (1029)
..+ ++|++|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|.++..
T Consensus 313 --~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~- 381 (454)
T 1jl5_A 313 --CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED- 381 (454)
T ss_dssp --CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE-
T ss_pred --cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh-
Confidence 223 488899999999886 4443 5788899999998884 555 46788999999999887 56665543
Q ss_pred ccccccccccccccccCCccccCCCCCCEEeCcCCcccC--cCchhhhcccccceeeccCCCCcCCCCC
Q 036879 572 KNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG--EIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 572 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
|+.|.+.+.+|.. +++|++||+++|++++ .+|. .++.|.+.+|.+.+.++.
T Consensus 382 -------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 382 -------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -------EECCC---------------------------------------------------------
T ss_pred -------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcccc
Confidence 3346666666653 4789999999999997 5554 356678899998886654
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-40 Score=389.58 Aligned_cols=231 Identities=22% Similarity=0.304 Sum_probs=156.5
Q ss_pred CCCCceee--EEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccC
Q 036879 33 TSVCNWFG--VTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSS 110 (1029)
Q Consensus 33 ~~~c~w~g--v~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 110 (1029)
.+.|.|.+ |.|+. .++. .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+..
T Consensus 5 ~~~c~~~~~~~~c~~------------~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~ 68 (455)
T 3v47_A 5 TSECSVIGYNAICIN------------RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGL 68 (455)
T ss_dssp --CCEEETTEEECCS------------SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTC
T ss_pred cceeEEEccccCcCC------------CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccc
Confidence 34577766 55542 2333 6666 2 3789999999999998888899999999999999998864
Q ss_pred CCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCcc--ccCCCcCcccccCCCcCcccCCCC
Q 036879 111 IEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSS--ILNIPSLLAIDLSNNQFSGPMPSI 188 (1029)
Q Consensus 111 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~ls~N~l~~~~~~~ 188 (1029)
.-.|..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. +.++++|++|+|++|++++.
T Consensus 69 ~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---- 144 (455)
T 3v47_A 69 VIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI---- 144 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC----
T ss_pred eECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc----
Confidence 222567888888999999998888777888888888888888888888655444 77777777777776666533
Q ss_pred CCCCCcccccccccccchhccccccccCCCCcc-cccccccceEEcccccccCCCCccccccccccceeecccccccccC
Q 036879 189 YNTSPLQNIDMQYNSLAELHLAYNQLSGQIPST-LFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQ 267 (1029)
Q Consensus 189 ~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~ 267 (1029)
.|.. +..+++|++|++++|++++..|..+.++.. .
T Consensus 145 -----------------------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~---------------~ 180 (455)
T 3v47_A 145 -----------------------------QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQG---------------K 180 (455)
T ss_dssp -----------------------------CCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTT---------------C
T ss_pred -----------------------------CcccccCCCCcccEEeCCCCcccccChhhhhcccc---------------c
Confidence 3433 667788888888888888777777665532 2
Q ss_pred cccEEEccCCcccCCCCCCc--------ccCCCCcEEEccCcccCCCCCchhhhc--ccccceEeecCcc
Q 036879 268 GLQVLALSSNRLTGVIPPEI--------INISSLTVLSLTANNLLGNLPSNIGHS--LPNLQQLILGGNR 327 (1029)
Q Consensus 268 ~L~~L~Ls~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~lp~~~~~~--l~~L~~L~L~~N~ 327 (1029)
+|+.|++++|.+++..+..+ ..+++|++|+|++|.+.+.+|..++.. .++|+.|++++|.
T Consensus 181 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~ 250 (455)
T 3v47_A 181 HFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250 (455)
T ss_dssp EEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT
T ss_pred cccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccc
Confidence 35567777777765444332 244556666666666555455444321 1344444444443
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-40 Score=391.62 Aligned_cols=376 Identities=18% Similarity=0.182 Sum_probs=313.6
Q ss_pred ceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCC
Q 036879 229 KILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLP 308 (1029)
Q Consensus 229 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp 308 (1029)
+.++.+++.++ .+|. + .++|++|+|++|+|++..|..|.++++|++|+|++|.+.+.++
T Consensus 13 ~~~~c~~~~l~-~lp~-l-------------------~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~ 71 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L-------------------PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIR 71 (455)
T ss_dssp TEEECCSSCCS-SCCC-C-------------------CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEEC
T ss_pred cccCcCCCCcc-cCCC-C-------------------CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceEC
Confidence 45777777766 4444 2 1356789999999998889999999999999999999877787
Q ss_pred chhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccC
Q 036879 309 SNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSE 388 (1029)
Q Consensus 309 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 388 (1029)
...+..+++|++|+|++|++++..|..|.++++|++|++++|.+.+..|.. ..+..+++|++|++++
T Consensus 72 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-------------~~~~~l~~L~~L~L~~ 138 (455)
T 3v47_A 72 NNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG-------------NFFKPLTSLEMLVLRD 138 (455)
T ss_dssp TTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS-------------STTTTCTTCCEEECCS
T ss_pred cccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCc-------------ccccCcccCCEEECCC
Confidence 766667999999999999999888999999999999999999987644332 1145788999999999
Q ss_pred CcCCCCCCcc-ccCchhhhcceeccccccccccccccCCc--CcCcEEEecCcccccccccc--------ccCCCCCCEE
Q 036879 389 NPLSGVLPIS-IGNLSNAMDVLYLSACNIKGSIPSEIGNL--NNLTTLHLETNELTGSIPKA--------IGRLQKLQGL 457 (1029)
Q Consensus 389 N~l~~~~p~~-~~~l~~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~--------~~~l~~L~~L 457 (1029)
|++++..|.. +..+.+ |++|++++|++++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|
T Consensus 139 n~l~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L 217 (455)
T 3v47_A 139 NNIKKIQPASFFLNMRR-FHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTL 217 (455)
T ss_dssp SBCCSCCCCGGGGGCTT-CCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEE
T ss_pred CccCccCcccccCCCCc-ccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeE
Confidence 9999887876 667765 9999999999998888888877 78999999999998654433 3366789999
Q ss_pred EeccccccCcccccccCC---CCCcEEecCCCcccCc----------cccccccc--cccceeeccCccccCCCCCCccC
Q 036879 458 YLQHNKLQGSITTDLCGL---RSLSEFYSDGNELNGS----------LPQCLDSL--ISLRTLSLGFNRLTSVIPSSLWS 522 (1029)
Q Consensus 458 ~L~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~----------~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~ 522 (1029)
++++|++++..+..+... .+|+.|++++|.+.+. .+..+..+ ++|++|++++|++++..|..|..
T Consensus 218 ~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 297 (455)
T 3v47_A 218 DLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297 (455)
T ss_dssp ECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT
T ss_pred ecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhccc
Confidence 999999988777766554 7889999988865432 22333333 68999999999999989999999
Q ss_pred CCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEe
Q 036879 523 LRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLD 602 (1029)
Q Consensus 523 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 602 (1029)
+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 99999999999999988888999999999999999999888888899999999999999999988889999999999999
Q ss_pred CcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC
Q 036879 603 MSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG 639 (1029)
Q Consensus 603 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 639 (1029)
|++|++++..+..+..+++|+.|++++|+++|.+|..
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999999877778889999999999999999988854
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.2e-40 Score=388.02 Aligned_cols=423 Identities=23% Similarity=0.269 Sum_probs=247.8
Q ss_pred ceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceecc
Q 036879 49 RVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYL 128 (1029)
Q Consensus 49 ~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~L 128 (1029)
+++.++++++++ |+||+++++|++|++|++++|+++|.+|.+++++++|+.++++.|.. .++++|++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~~L~l 78 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAHELEL 78 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCSEEEC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCCEEEe
Confidence 455666666666 56666666666666666666666666666666666666666655542 34677888
Q ss_pred ccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhc
Q 036879 129 DGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELH 208 (1029)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~ 208 (1029)
++|++++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++.+... .+|++|+
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~-------------~~L~~L~ 137 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLP-------------PLLEYLG 137 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCC-------------TTCCEEE
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCC-------------CCCCEEE
Confidence 8888774 4442 3677888888888875 6643 367777888888777533210 2466677
Q ss_pred cccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcc
Q 036879 209 LAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEII 288 (1029)
Q Consensus 209 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 288 (1029)
+++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .+.
T Consensus 138 L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~--------------------~~L~~L~L~~n~l~~-l~-~~~ 192 (454)
T 1jl5_A 138 VSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP--------------------PSLEFIAAGNNQLEE-LP-ELQ 192 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC--------------------TTCCEEECCSSCCSS-CC-CCT
T ss_pred CcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc--------------------ccccEEECcCCcCCc-Cc-ccc
Confidence 77777775 55 47777777777777777664 44322 357789999999986 55 689
Q ss_pred cCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcc
Q 036879 289 NISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDE 368 (1029)
Q Consensus 289 ~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~ 368 (1029)
++++|++|++++|.+. .+|.. .++|++|++++|+++ .+| .+..+++|+.|++++|++++ +|.
T Consensus 193 ~l~~L~~L~l~~N~l~-~l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~---------- 254 (454)
T 1jl5_A 193 NLPFLTAIYADNNSLK-KLPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---------- 254 (454)
T ss_dssp TCTTCCEEECCSSCCS-SCCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS----------
T ss_pred CCCCCCEEECCCCcCC-cCCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc----------
Confidence 9999999999999997 46653 358999999999998 566 48899999999999999875 332
Q ss_pred cccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccc
Q 036879 369 LGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAI 448 (1029)
Q Consensus 369 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 448 (1029)
.+++|+.|++++|++++ +|..+ ..|+.|++++|++++. |.. .++|++|++++|++++ ++
T Consensus 255 --------~~~~L~~L~l~~N~l~~-l~~~~----~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~--- 313 (454)
T 1jl5_A 255 --------LPPSLEALNVRDNYLTD-LPELP----QSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC--- 313 (454)
T ss_dssp --------CCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC---
T ss_pred --------cccccCEEECCCCcccc-cCccc----CcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc---
Confidence 13688999999999885 45433 3488899999988862 221 2678899999998884 22
Q ss_pred cCC-CCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccC--CCCCCccCCCC
Q 036879 449 GRL-QKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTS--VIPSSLWSLRD 525 (1029)
Q Consensus 449 ~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~ 525 (1029)
.+ ++|++|++++|++++.. .. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|..+..
T Consensus 314 -~~~~~L~~L~Ls~N~l~~lp-~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--- 381 (454)
T 1jl5_A 314 -DLPPSLEELNVSNNKLIELP-AL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--- 381 (454)
T ss_dssp -CCCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE---
T ss_pred -CCcCcCCEEECCCCcccccc-cc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh---
Confidence 23 47889999999887633 22 5788888888888874 444 46788888888888887 45555433
Q ss_pred CcEEEccCCcccCcCCccccccccccEEEccCCcCCC--CCCccccCcccccccccccccccccCCccccCC
Q 036879 526 ILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSG--EIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGL 595 (1029)
Q Consensus 526 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 595 (1029)
|+.|.+.+.+|.. +++|+.|++++|.+++ .+|. +|+.|.+.+|.+.+..+.+....
T Consensus 382 -----L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~~~ 439 (454)
T 1jl5_A 382 -----LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHETT 439 (454)
T ss_dssp -----EECCC--------------------------------------------------------------
T ss_pred -----hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCccccCHHHh
Confidence 2346666666653 4789999999999986 4553 46777889999988776555443
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.6e-41 Score=375.09 Aligned_cols=280 Identities=35% Similarity=0.556 Sum_probs=225.8
Q ss_pred ccccCHHHHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCceEEEEEEE
Q 036879 725 WRRISYQELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE-GTLRSFDAECEILGSIRHRNLVKIISTC 803 (1029)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 803 (1029)
...+++.++....++|++.+.||+|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 457888999999999999999999999999999988899999999876532 2334789999999999999999999999
Q ss_pred ecCCeEEEEEeccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEE
Q 036879 804 SSDHFKALVLEYMPNGSLENWMYNKN---RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLS 880 (1029)
Q Consensus 804 ~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~ 880 (1029)
...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||..+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 348999999999999999999995544489999999999999999999999
Q ss_pred ccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCccc---ccccccchhchhcc
Q 036879 881 DFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELF---VGEISLKSRVNDSL 953 (1029)
Q Consensus 881 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~---~~~~~~~~~~~~~~ 953 (1029)
|||++...............||+.|+|||++ ++.++||||+||++|||++|+.||+... ........++....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 9999988765544445556699999999984 6779999999999999999999996422 11222222222222
Q ss_pred chh-hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHH
Q 036879 954 HGK-IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLK 1010 (1029)
Q Consensus 954 ~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~ 1010 (1029)
... .....+..... ..+..++..+.+++.+||+.||++|||++|++++|+.
T Consensus 257 ~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 257 KEKKLEALVDVDLQG------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp SSCCSTTSSCTTCTT------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hchhhhhhcChhhcc------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 111 22222222211 1234567889999999999999999999999999975
No 50
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=370.09 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=215.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||+||+|++. +++.||+|.+........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 457888999999999999999975 6899999998776666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887788999999999999999999999 7779999999999999999999999999998764432211
Q ss_pred -------------eccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhh
Q 036879 896 -------------QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKII 958 (1029)
Q Consensus 896 -------------~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1029)
.....||+.|+|||++ ++.++|||||||++|||++|..||.............. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------~ 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV--------R 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH--------H
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh--------h
Confidence 1135699999999984 57799999999999999999999875433222111110 0
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 959 NVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 959 ~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
...+ ...+..++..+.+++.+||+.||++|||++|+++.|+.+.+.+..
T Consensus 238 ~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 238 GFLD----------RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHHH----------HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred cccc----------ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1111 011234566789999999999999999999999999999887654
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-40 Score=371.73 Aligned_cols=274 Identities=34% Similarity=0.548 Sum_probs=220.1
Q ss_pred HHHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 731 QELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 731 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
.++...+++|+..+.||+|+||.||+|++.+++.||||++........+.+.+|+++++.++||||+++++++...+..+
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 34445778999999999999999999998889999999988776666788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 811 LVLEYMPNGSLENWMYNKN---RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999999886543 35899999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCC-CceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhcCCCCCCccccccc-ccchhchhcc-chhhhhh
Q 036879 888 LGDET-SMTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFTKKKPTDELFVGEI-SLKSRVNDSL-HGKIINV 960 (1029)
Q Consensus 888 ~~~~~-~~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~ 960 (1029)
..... ........||+.|+|||+ .++.++|||||||++|||++|+.||......+. ....+..... .+.+...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 54322 122233458999999998 368899999999999999999999976433221 1111111111 1111222
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
++.... ...+..++..+.+++.+||+.||++|||++|++++|+.+.+
T Consensus 269 ~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 269 VDPNLA------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSCT------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cChhhc------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 222111 12234568889999999999999999999999999998865
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.8e-40 Score=363.15 Aligned_cols=247 Identities=23% Similarity=0.327 Sum_probs=205.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 467999999999999999999864 7999999999876666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
+++|+|.+++... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999998653 5899999999999999999999 67899999999999999999999999999987654433 2
Q ss_pred eccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhh
Q 036879 896 QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDA 971 (1029)
Q Consensus 896 ~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 971 (1029)
.....||+.|+|||++ ++.++||||+||++|||++|+.||.......... ... .....
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------------~~~-----~~~~~ 234 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-------------LIA-----TNGTP 234 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------------HHH-----HHCSC
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HHH-----hCCCC
Confidence 3346799999999983 6789999999999999999999996532111000 000 00000
Q ss_pred hhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 972 YLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 972 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
....+..++..+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111123456778999999999999999999999874
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.5e-40 Score=364.96 Aligned_cols=273 Identities=20% Similarity=0.289 Sum_probs=206.4
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC----eEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH----FKAL 811 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 811 (1029)
..++|++.+.||+|+||+||+|+.. ++.||||++.... .......+|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3567899999999999999999875 7999999997553 23345667899999999999999999997743 4699
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CcEEcCCCCCCEEECCCCcEEEEc
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPT----------PIIHCDLNPSNILLNESMVACLSD 881 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~----------givH~Dlk~~Nill~~~~~~kl~D 881 (1029)
||||+++|+|.+++.. ..+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999965 34899999999999999999999 66 899999999999999999999999
Q ss_pred cCCceecCCCCCc-eeccccCCccccCccCCCC---------CCcchhHHHHHHHHHhcCCCCCCcccccccc-cchhch
Q 036879 882 FGISKLLGDETSM-TQTQTLATIGYMAPEWKLS---------RKGDVYSYGIILMETFTKKKPTDELFVGEIS-LKSRVN 950 (1029)
Q Consensus 882 fg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~---------~~~DvwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~ 950 (1029)
||+|+........ ......||+.|+|||++.+ .++|||||||++|||++|+.||......... +.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2233578999999998533 3679999999999999999999764322111 111000
Q ss_pred hcc-chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 951 DSL-HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 951 ~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
... ...+.+.+.................++.++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 01111111110000000001112245677999999999999999999999999999998753
No 54
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=371.42 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=196.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3578999999999999999999874 79999999997654 234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||+++|+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+|........
T Consensus 88 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999998653 46899999999999999999999 67899999999999999999999999999986654433
Q ss_pred ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.......||+.|+|||++ .+.++||||+||++|||++|+.||.+....+ ... .... .
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-----~~~--------~i~~----~- 225 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-----LYK--------KIMR----G- 225 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHH--------HHHH----T-
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-----HHH--------HHHc----C-
Confidence 333446799999999984 3778999999999999999999997531110 000 0000 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLL 1009 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1009 (1029)
....+..++..+.+++.+||+.||++|||++|++++-.
T Consensus 226 ---~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 226 ---KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 01112234667889999999999999999999998643
No 55
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.7e-40 Score=359.19 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=210.5
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 457888999999999999999998899999999976533 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCcee
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQ 896 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 896 (1029)
++++|.+++......+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||++...........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999999877778999999999999999999999 77799999999999999999999999999987654333333
Q ss_pred ccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhh
Q 036879 897 TQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDA 971 (1029)
Q Consensus 897 ~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 971 (1029)
....+++.|+|||.+ ++.++||||+|+++|||++ |+.||......+. . ...... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~--~-----------~~~~~~-~------ 224 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--V-----------EDISTG-F------ 224 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--H-----------HHHHTT-C------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH--H-----------HHHhcC-c------
Confidence 345577889999983 6779999999999999999 9999875321110 0 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 972 YLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 972 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
....+..++..+.+++.+||+.||++|||++|++++|+++.++
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0011123466789999999999999999999999999998764
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.6e-40 Score=358.01 Aligned_cols=255 Identities=26% Similarity=0.418 Sum_probs=210.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||.||+|+..++..||+|+++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3567889999999999999999998888999999976532 346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+..........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999877677999999999999999999999 7789999999999999999999999999998776554444
Q ss_pred eccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhh
Q 036879 896 QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKED 970 (1029)
Q Consensus 896 ~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 970 (1029)
.....+|+.|+|||.+ ++.++||||+|+++|||++ |+.||......+.. . ......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~--~-----------~~~~~~------ 222 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV--L-----------KVSQGH------ 222 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--H-----------HHHTTC------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH--H-----------HHHcCC------
Confidence 4445567889999983 6789999999999999999 99998753211110 0 000000
Q ss_pred hhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 971 AYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 971 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
....+..++..+.+++.+||+.+|++|||++|++++|+.+.+.
T Consensus 223 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 223 -RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0011122456789999999999999999999999999988754
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.3e-40 Score=364.60 Aligned_cols=262 Identities=25% Similarity=0.392 Sum_probs=200.4
Q ss_pred HHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
...++|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 4456789999999999999999987 68899999987653 33456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 813 LEYMPNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +.| |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999965432 3899999999999999999999 788 999999999999999999999999999765
Q ss_pred CCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
.... .......||+.|+|||++ ++.++|||||||++|||++|+.||......+. .. .+..
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~------------~~~~- 253 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VA------------AVGF- 253 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HH------------HHHH-
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH------------HHHh-
Confidence 4322 222345689999999984 67799999999999999999999975321111 00 0000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccccc
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIE 1020 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~ 1020 (1029)
.......+..++..+.+++.+||+.||++|||++|+++.|+.+.+......+
T Consensus 254 ----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~ 305 (309)
T 3p86_A 254 ----KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305 (309)
T ss_dssp ----SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred ----cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence 0000111234567789999999999999999999999999999877654443
No 58
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.3e-40 Score=365.71 Aligned_cols=257 Identities=25% Similarity=0.464 Sum_probs=208.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
.++|++.+.||+|+||.||+|++. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 456888899999999999999874 34569999998653 3445679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877778999999999999999999999 678999999999999999999999999999877543
Q ss_pred CCc--eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 892 TSM--TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 892 ~~~--~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
... ......+|+.|+|||++ ++.++|||||||++|||++ |+.||......+. . ..+...
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~------------~~~~~~ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--I------------SSVEEG 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--H------------HHHHTT
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--H------------HHHHcC
Confidence 221 22234467889999984 6778999999999999999 9999865321111 0 000000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
.....+..++..+.+++..||..||++|||+.|+++.|+.+.+...
T Consensus 271 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 271 ------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred ------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011123456789999999999999999999999999999987543
No 59
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.7e-39 Score=355.04 Aligned_cols=278 Identities=30% Similarity=0.480 Sum_probs=223.0
Q ss_pred cccccCHHHHHHHhCCCCCC------ceeccCcceEEEEEEecCCcEEEEEEeeccc----chhhHHHHHHHHHHhcCCC
Q 036879 724 TWRRISYQELFRATDGFSEN------NLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL----EGTLRSFDAECEILGSIRH 793 (1029)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h 793 (1029)
....+++.++..+++.|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678899999999999887 8999999999999987 68899999987532 2345679999999999999
Q ss_pred CceEEEEEEEecCCeEEEEEeccCCCCHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE
Q 036879 794 RNLVKIISTCSSDHFKALVLEYMPNGSLENWMYNK--NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL 871 (1029)
Q Consensus 794 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill 871 (1029)
|||+++++++...+..++||||+++++|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998643 356899999999999999999999 6789999999999999
Q ss_pred CCCCcEEEEccCCceecCCCCCc-eeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccch
Q 036879 872 NESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKS 947 (1029)
Q Consensus 872 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~ 947 (1029)
+.++.+||+|||++......... ......||+.|+|||.. ++.++||||||+++|||++|+.||........ ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHH
Confidence 99999999999999876543222 22335689999999984 57799999999999999999999976432221 111
Q ss_pred hchhcc--chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 948 RVNDSL--HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 948 ~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
+..... ...+.+.++..+. ..+..++..+.+++.+||+.||++|||+++++++|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCS-------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhcccccc-------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 111110 0112222222221 1234567889999999999999999999999999998864
No 60
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-39 Score=370.83 Aligned_cols=256 Identities=23% Similarity=0.446 Sum_probs=207.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec--------CCcEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEecC
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS--------DGMQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSSD 806 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 806 (1029)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 35679999997653 33456799999999999 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE
Q 036879 807 HFKALVLEYMPNGSLENWMYNKN---------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL 871 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill 871 (1029)
+..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997653 34789999999999999999999 6789999999999999
Q ss_pred CCCCcEEEEccCCceecCCCCCc-eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCccccccccc
Q 036879 872 NESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISL 945 (1029)
Q Consensus 872 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~ 945 (1029)
+.++.+||+|||+++........ ......+|+.|+|||++ ++.++|||||||++|||++ |+.||.+....+.
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~-- 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-- 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--
Confidence 99999999999999876543222 22334578899999974 6778999999999999999 9999875321110
Q ss_pred chhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 946 KSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 946 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
. ..+... .....+..++.++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 315 ~------------~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 315 F------------KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp H------------HHHHTT------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H------------HHHhcC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0 000000 001122345678999999999999999999999999999987543
No 61
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.1e-40 Score=365.83 Aligned_cols=245 Identities=21% Similarity=0.293 Sum_probs=202.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
..++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356799999999999999999997 489999999997653 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++... +.+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999998654 56899999999999999999999 6789999999999999999999999999998664432
Q ss_pred CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
......||+.|+|||++ .+.++||||+||++|||++|+.||.+....+ .. ......
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~------------~~i~~~ 229 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE-----LR------------ERVLRG 229 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH------------HHHHHC
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH-----HH------------HHHHhC
Confidence 23346799999999984 2468999999999999999999997531110 00 000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ...+..++..+.+++.+|+..||++|||++|++++
T Consensus 230 ~----~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 230 K----YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp C----CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C----CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 01122346678999999999999999999999875
No 62
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-40 Score=381.41 Aligned_cols=259 Identities=17% Similarity=0.230 Sum_probs=209.2
Q ss_pred HHHHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEec
Q 036879 730 YQELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSS 805 (1029)
Q Consensus 730 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 805 (1029)
+.++....++|++.+.||+|+||+||+|+.. +++.||+|++++.. ....+.+.+|+.+++.++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444556789999999999999999999986 58899999997642 2233458899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCc
Q 036879 806 DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGIS 885 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a 885 (1029)
.+..++||||+++|+|.+++......+++..+..++.|++.||+||| +.|||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876778999999999999999999999 677999999999999999999999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC---------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK---------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGK 956 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~---------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 956 (1029)
+.............+||+.|+|||++ ++.++||||+||++|||++|+.||......+.
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------------- 289 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------------- 289 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------------
Confidence 87765544444456799999999984 57789999999999999999999975311110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccC--CCCHHHHHHH
Q 036879 957 IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEE--RINIKEALTK 1007 (1029)
Q Consensus 957 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 1007 (1029)
.......... .........++..+.+++.+|+..+|++ ||+++|++++
T Consensus 290 ~~~i~~~~~~---~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 290 YGKIMNHKER---FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHHTHHHH---CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred HHhhhhcccc---ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0011100000 0000001124677899999999988888 9999999875
No 63
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.8e-40 Score=363.25 Aligned_cols=270 Identities=27% Similarity=0.467 Sum_probs=208.3
Q ss_pred hCCCCCCceeccCcceEEEEEEe-----cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec--CCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-----SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS--DHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 809 (1029)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999999984 2689999999987766667889999999999999999999999855 3557
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999877777999999999999999999999 6789999999999999999999999999998764
Q ss_pred CCCC--ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchh-h-hhhh
Q 036879 890 DETS--MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGK-I-INVV 961 (1029)
Q Consensus 890 ~~~~--~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 961 (1029)
.... .......++..|+|||.+ ++.++|||||||++|||++|..||........ .......... . ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH---HHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH---hhhcCccccchhHHHHH
Confidence 4322 122334577889999983 67899999999999999999999865321111 0000000000 0 0000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
+ ... .......+..++.++.+++.+||+.||++|||++|+++.|+++.+++
T Consensus 243 ~-~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 243 E-LLK--NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp H-HHH--TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred H-HHh--ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0 000 00111223456788999999999999999999999999999998765
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-39 Score=360.32 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=205.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999876 68999999987543 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC--CCcEEEEccCCceecCCCCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE--SMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
+++|+|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||++........
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999776678999999999999999999999 778999999999999987 89999999999987754332
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
.....||+.|+|||++ ++.++||||+||++|||++|+.||......+. . ...... ..
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~--------~~i~~~----~~ 220 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-----I--------ENIMNA----EY 220 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----H--------HHHHHT----CC
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-----H--------HHHHcC----CC
Confidence 2345689999999984 56789999999999999999999975321110 0 000000 00
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.........++.++.+++.+|+..||++|||+.|++++-
T Consensus 221 ~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 221 TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 001111234567899999999999999999999999854
No 65
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.6e-39 Score=359.39 Aligned_cols=259 Identities=21% Similarity=0.269 Sum_probs=209.1
Q ss_pred cccCHHHHHHHhCC----------CCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCC
Q 036879 726 RRISYQELFRATDG----------FSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHR 794 (1029)
Q Consensus 726 ~~~~~~~~~~~~~~----------~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ 794 (1029)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45666766666543 666789999999999999976 7999999999876666667899999999999999
Q ss_pred ceEEEEEEEecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC
Q 036879 795 NLVKIISTCSSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES 874 (1029)
Q Consensus 795 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~ 874 (1029)
||+++++++...+..++||||+++++|.+++. ...+++..+..++.|++.||+||| +.||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS--QVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 99999999999999999999999999999884 356899999999999999999999 6789999999999999999
Q ss_pred CcEEEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch
Q 036879 875 MVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN 950 (1029)
Q Consensus 875 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 950 (1029)
+.+||+|||++........ ......||+.|+|||++ ++.++|||||||++|||++|+.||......+ ...
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~--- 251 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMK--- 251 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHH---
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH---
Confidence 9999999999987654322 22345799999999984 6778999999999999999999996531110 000
Q ss_pred hccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 951 DSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 951 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.+....... ......++..+.+++.+||+.||++|||++|++++-
T Consensus 252 -----~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 252 -----RLRDSPPPK--------LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp -----HHHHSSCCC--------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred -----HHhcCCCCC--------cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000000 011123466789999999999999999999999853
No 66
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-40 Score=375.66 Aligned_cols=257 Identities=28% Similarity=0.437 Sum_probs=209.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||.||+|++. +++.||||.++... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3567888999999999999999986 78999999987553 233467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876667999999999999999999999 77799999999999999999999999999986543221
Q ss_pred cee-ccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 894 MTQ-TQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 894 ~~~-~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
... ....+++.|+|||++ ++.++|||||||++|||++ |+.||......+. .+.+...
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~--------------~~~~~~~--- 331 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT--------------REFVEKG--- 331 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH--------------HHHHHTT---
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcC---
Confidence 111 112357789999984 5778999999999999998 9999875321110 0111100
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
...+.+..++..+.+++.+||+.||++|||++++++.|+++.+..
T Consensus 332 ---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 332 ---GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 011123346778999999999999999999999999999998753
No 67
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.3e-39 Score=356.60 Aligned_cols=255 Identities=26% Similarity=0.444 Sum_probs=207.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||.||+|++.++..||+|+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4567889999999999999999998888999999976532 346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
+++++|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+..........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 9999999999776778999999999999999999999 6789999999999999999999999999998765433223
Q ss_pred eccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhh
Q 036879 896 QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKED 970 (1029)
Q Consensus 896 ~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 970 (1029)
.....+|+.|+|||+. ++.++||||+|+++|||++ |+.||......+. .. .+....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~--------~~~~~~--------- 238 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AE--------HIAQGL--------- 238 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HH--------HHHTTC---------
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HH--------HHhccc---------
Confidence 3334577889999983 6778999999999999998 9999975321110 00 000000
Q ss_pred hhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 971 AYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 971 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
....+..++..+.+++.+||+.+|++|||++|++++|+++.+.
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0011123356789999999999999999999999999988764
No 68
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-39 Score=356.26 Aligned_cols=259 Identities=22% Similarity=0.390 Sum_probs=203.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999875 78999999986542 33456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++... ..+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998654 46899999999999999999999 7789999999999999999999999999998765443
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
........||+.|+|||.+ ++.++||||+||++|||++|+.||........... ..... .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~-------------~~~~~---~ 229 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK-------------HIQDS---V 229 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHH-------------HHSSC---C
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-------------Hhhcc---C
Confidence 3333445699999999983 67789999999999999999999976321111000 00000 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCC-CHHHHHHHHHHhHHhh
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERI-NIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L~~i~~~~ 1015 (1029)
.......+..++..+.+++.+|++.||++|| +++++.+.|+.+....
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 0001111233567899999999999999999 9999999998776443
No 69
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.6e-39 Score=362.30 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=202.2
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch------hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG------TLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 567999999999999999999976 7999999999865322 246789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC----cEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM----VACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~----~~kl~Dfg~a 885 (1029)
++||||+++|+|.+++.. ...+++..+..++.||+.|++||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999854 457999999999999999999999 67899999999999998777 7999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
........ .....||+.|+|||++ ++.++||||+||++|+|++|+.||.+....+. . ....
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-----~--------~~i~ 231 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-----L--------ANIT 231 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-----H--------HHHH
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-----H--------HHHH
Confidence 87754322 2345699999999983 67789999999999999999999965311110 0 0000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. .........+...+..+.+++.+|+..||++|||+.|++++
T Consensus 232 ~----~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 232 A----VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp T----TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred h----cCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 00000111223456778999999999999999999999863
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.8e-39 Score=369.21 Aligned_cols=256 Identities=28% Similarity=0.519 Sum_probs=198.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457999999999999999999864 57789999997653 3345679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877778999999999999999999999 678999999999999999999999999999876543
Q ss_pred CCc--eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 892 TSM--TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 892 ~~~--~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
... ......+++.|+|||++ ++.++|||||||++|||++ |+.||......+ ....+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------------~~~~i~~~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------------VIKAVDEG 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------------HHHHHHTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcC
Confidence 221 11223457789999983 6778999999999999998 999986532111 00111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
. ....+..++..+.+++.+||+.||++||++.|+++.|+.+.+..
T Consensus 267 ~------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 Y------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp E------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred C------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0 01112245678999999999999999999999999999987654
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.5e-39 Score=360.61 Aligned_cols=245 Identities=22% Similarity=0.298 Sum_probs=201.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||+|++++.. ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 457899999999999999999976 79999999997652 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++.. .+.+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999999998854 456899999999999999999999 6789999999999999999999999999998643322
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
. ......||+.|+|||++ ++.++||||+||++|||++|+.||....... ... .....
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~--------~i~~~----- 220 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFE--------LILME----- 220 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHH--------HHHHC-----
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH-----HHH--------HHHcC-----
Confidence 2 22345799999999984 6789999999999999999999996531110 000 00000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1007 (1029)
....+..++.++.+++.+||+.||++|| +++|++++
T Consensus 221 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 ---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0011223567789999999999999999 89999875
No 72
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.3e-39 Score=356.50 Aligned_cols=266 Identities=22% Similarity=0.328 Sum_probs=203.0
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||+||+|+..+|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3577999999999999999999998899999999875432 23467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||++ +++.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.......
T Consensus 99 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 99 EFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp ECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred cCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9997 5898888777778999999999999999999999 67899999999999999999999999999987653322
Q ss_pred ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch---hccchhhhhhhhhh-
Q 036879 894 MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN---DSLHGKIINVVDIN- 964 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~- 964 (1029)
......+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +..... ......+....+..
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccch
Confidence 23345689999999973 56789999999999999999999976432211 111100 00000000000000
Q ss_pred -----hhh-hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 965 -----LLQ-KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 965 -----~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
... ...........++.++.+++.+|++.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 0000111122346678999999999999999999999874
No 73
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.6e-39 Score=371.93 Aligned_cols=255 Identities=21% Similarity=0.288 Sum_probs=206.2
Q ss_pred HHHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecC
Q 036879 731 QELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSD 806 (1029)
Q Consensus 731 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 806 (1029)
.++....++|++.+.||+|+||+||+|+.. +++.||+|++++.. ....+.+.+|+++++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344456788999999999999999999976 68999999997642 22345688999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 807 HFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
+..|+||||+++|+|.+++.. ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999999864 35899999999999999999999 6789999999999999999999999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC--------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhh
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK--------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKII 958 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1029)
..............||+.|+|||++ ++.++|||||||++|||++|+.||......+. ..
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-------------~~ 283 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-------------YS 283 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-------------HH
Confidence 7765443344456799999999984 56789999999999999999999975311100 00
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccC--CCCHHHHHHH
Q 036879 959 NVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEE--RINIKEALTK 1007 (1029)
Q Consensus 959 ~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rpt~~evl~~ 1007 (1029)
...... .....+....++.++.+++.+|+..+|++ ||+++|++++
T Consensus 284 ~i~~~~----~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 284 KIMNHK----NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHTHH----HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHhcc----ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111000 00000111134677899999999999999 9999999986
No 74
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.1e-38 Score=350.00 Aligned_cols=266 Identities=16% Similarity=0.204 Sum_probs=213.7
Q ss_pred hCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++.+ +|++++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 56799999999999999999996 479999999986442 345688999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc-----EEEEccCCceecC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV-----ACLSDFGISKLLG 889 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 889 (1029)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877778999999999999999999999 788999999999999987776 9999999998765
Q ss_pred CCCCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhh
Q 036879 890 DETSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIIN 959 (1029)
Q Consensus 890 ~~~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1029)
..... ......||+.|+|||++ ++.++|||||||++|||++|+.||........ .. .+..
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~--------~~~~ 232 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQ--------KYER 232 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HH--------HHHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HH--------HHHH
Confidence 43221 22345699999999984 56789999999999999999999976321111 00 0000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccccC
Q 036879 960 VVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIEN 1021 (1029)
Q Consensus 960 ~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~~ 1021 (1029)
...... ..........++..+.+++..||+.||++|||++++++.|+++.+....+.+.
T Consensus 233 ~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~ 291 (298)
T 1csn_A 233 IGEKKQ---STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDE 291 (298)
T ss_dssp HHHHHH---HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCS
T ss_pred HHhhcc---CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 000000 00011112245778999999999999999999999999999999887655543
No 75
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4e-39 Score=352.34 Aligned_cols=256 Identities=21% Similarity=0.374 Sum_probs=196.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||.||+|+.. .+..||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3467888999999999999999874 24579999987543 334567899999999999999999999985 45678
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999877778999999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
..........+++.|+|||++ ++.++|||||||++|||++ |+.||......+. ... .....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~-----------i~~~~- 234 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGR-----------IENGE- 234 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH-----------HHTTC-
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHH-----------HHcCC-
Confidence 433333445578899999983 6778999999999999996 9999975322111 000 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
....+..++..+.+++.+||+.||++|||+.|+++.|+++.+.-
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 235 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01112345678899999999999999999999999999987654
No 76
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.8e-38 Score=366.46 Aligned_cols=364 Identities=20% Similarity=0.216 Sum_probs=212.5
Q ss_pred cccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCc
Q 036879 59 GLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIP 138 (1029)
Q Consensus 59 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 138 (1029)
+..+..+..++++++|++|++++|.+++ +| .++.+++|++|+|++|+++.+ | ++.+++|++|+|++|++++ +|
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~--~--~~~l~~L~~L~Ls~N~l~~-~~ 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL--D--LSQNTNLTYLACDSNKLTN-LD 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC--C--CTTCTTCSEEECCSSCCSC-CC
T ss_pred CcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE--c--cccCCCCCEEECcCCCCce-ee
Confidence 3444555667778888888888888885 45 678888888888888888853 3 7778888888888888875 33
Q ss_pred ccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCC
Q 036879 139 PSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQI 218 (1029)
Q Consensus 139 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~ 218 (1029)
++++++|++|+|++|++++ +| +.++++|++|++++|++++..
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~--------------------------------- 143 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEID--------------------------------- 143 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCCC---------------------------------
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccceec---------------------------------
Confidence 7788888888888888874 44 777777777777777766431
Q ss_pred CcccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEc
Q 036879 219 PSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSL 298 (1029)
Q Consensus 219 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 298 (1029)
++.+++|++|++++|+..+.+ .++.++ +|+.|+|++|++++ +| +..+++|++|++
T Consensus 144 ---l~~l~~L~~L~l~~n~~~~~~--~~~~l~-----------------~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 144 ---VSHNTQLTELDCHLNKKITKL--DVTPQT-----------------QLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp ---CTTCTTCCEEECTTCSCCCCC--CCTTCT-----------------TCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred ---cccCCcCCEEECCCCCccccc--ccccCC-----------------cCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 334455555555555443333 133322 23345555555554 22 455555666666
Q ss_pred cCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccc
Q 036879 299 TANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNC 378 (1029)
Q Consensus 299 s~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l 378 (1029)
++|++.+ ++ + ..+++|++|+|++|++++ +| +..+++|+.|++++|.+++..+ ..+
T Consensus 199 ~~N~l~~-~~--l-~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~------------------~~l 253 (457)
T 3bz5_A 199 DTNNITK-LD--L-NQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV------------------STL 253 (457)
T ss_dssp CSSCCSC-CC--C-TTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC------------------TTC
T ss_pred cCCcCCe-ec--c-ccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH------------------HHC
Confidence 6666542 22 2 235566666666666665 33 5555666666666666654321 234
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLY 458 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 458 (1029)
++|+.|++++|+ ++.|++++|.+.+.+| ++.+++|+.|+|++|...+.+|. ..++|+.|+
T Consensus 254 ~~L~~L~l~~n~---------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~ 313 (457)
T 3bz5_A 254 SKLTTLHCIQTD---------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELD 313 (457)
T ss_dssp TTCCEEECTTCC---------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCC
T ss_pred CCCCEEeccCCC---------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEec
Confidence 566677766654 4456677776665555 45667777777777766655553 234455554
Q ss_pred eccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 459 LQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 459 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
+++| ++|++|++++|++++. + ++.+++|+.|++++|+|++ ++.|..|++++|.+.|
T Consensus 314 l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g 369 (457)
T 3bz5_A 314 LSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEA 369 (457)
T ss_dssp CTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEE
T ss_pred hhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEe
Confidence 4444 3455555555555542 1 4455555555555555543 1233334444444443
Q ss_pred cCCccccccccccEEEccCCcCCCCCCc
Q 036879 539 TLPVEIGNLKVVTKIDLSRNDLSGEIPS 566 (1029)
Q Consensus 539 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 566 (1029)
. +.+..|+.+++++|+++|.+|.
T Consensus 370 ~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 370 E-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp E-----EEEEECCCBCCBTTBEEEECCT
T ss_pred c-----ceeeecCccccccCcEEEEcCh
Confidence 2 2333344444444444444443
No 77
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-39 Score=349.72 Aligned_cols=254 Identities=26% Similarity=0.429 Sum_probs=209.4
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 457888999999999999999998889999999986543 3467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCcee
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQ 896 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 896 (1029)
++++|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999877778999999999999999999999 77799999999999999999999999999986644322222
Q ss_pred ccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhh
Q 036879 897 TQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDA 971 (1029)
Q Consensus 897 ~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 971 (1029)
....+++.|+|||+. ++.++||||+|+++|||++ |+.||......+. .. ..... .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~--------~i~~~-~------ 222 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VE--------DISTG-F------ 222 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HH--------HHHTT-C------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH-----HH--------HHhcC-C------
Confidence 334577889999983 6778999999999999999 8999875321110 00 00000 0
Q ss_pred hhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 972 YLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 972 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
....+..++..+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0011123466789999999999999999999999999998764
No 78
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=369.81 Aligned_cols=258 Identities=20% Similarity=0.261 Sum_probs=207.7
Q ss_pred HHHHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEec
Q 036879 730 YQELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSS 805 (1029)
Q Consensus 730 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 805 (1029)
+.+.....++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444456788999999999999999999975 79999999997542 2334568899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCc
Q 036879 806 DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGIS 885 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a 885 (1029)
.+..|+||||+++|+|.+++.+.+..+++..+..++.||+.||+||| +.||+||||||+||+++.++++||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999776668999999999999999999999 677999999999999999999999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC-----------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK-----------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
+..............||+.|+|||++ ++.++|||||||++|||++|+.||......+.
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----------- 278 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET----------- 278 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----------
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-----------
Confidence 88765444334446799999999974 47789999999999999999999975321110
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCC---CCHHHHHHH
Q 036879 955 GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEER---INIKEALTK 1007 (1029)
Q Consensus 955 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---pt~~evl~~ 1007 (1029)
+........ .......+..++.++.+++.+|+. +|++| |+++|++++
T Consensus 279 --~~~i~~~~~---~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 279 --YGKIVHYKE---HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --HHHHHTHHH---HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --HHHHHhccc---CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 001110000 000011123457789999999999 99998 589999874
No 79
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.4e-38 Score=356.52 Aligned_cols=261 Identities=19% Similarity=0.235 Sum_probs=208.8
Q ss_pred hCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999996 479999999987543 235688999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc-----EEEEccCCceecC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV-----ACLSDFGISKLLG 889 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 889 (1029)
|+ +++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||+|+.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999877778999999999999999999999 678999999999999998887 9999999998764
Q ss_pred CCCCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhh
Q 036879 890 DETSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIIN 959 (1029)
Q Consensus 890 ~~~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1029)
..... ......||+.|+|||++ ++.++|||||||++|||++|+.||........ ... +..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~--------~~~ 231 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KER--------YQK 231 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHH--------HHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHH--------HHH
Confidence 43221 12345799999999984 56789999999999999999999976321111 100 000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 960 VVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 960 ~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
...... ..........++ ++.+++..||+.||++||+++++.+.|+++.++...
T Consensus 232 i~~~~~---~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 232 IGDTKR---ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HHHHHH---HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHhhhc---cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 100000 000000111234 899999999999999999999999999999887644
No 80
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=354.68 Aligned_cols=248 Identities=21% Similarity=0.309 Sum_probs=201.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch------hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG------TLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+++++.++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356889999999999999999976 6899999999765321 356789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC----cEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM----VACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~----~~kl~Dfg~a 885 (1029)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999854 457999999999999999999999 67899999999999999887 8999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
+....... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+. +....
T Consensus 166 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------------~~~~~ 230 (326)
T 2y0a_A 166 HKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-------------LANVS 230 (326)
T ss_dssp EECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-------------HHHHH
T ss_pred eECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-------------HHHHH
Confidence 87654322 2335699999999983 67789999999999999999999965311100 00000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.. ...........++..+.+++.+||..||++|||+.|++++
T Consensus 231 ~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 231 AV----NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HT----CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hc----CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0000011123356778999999999999999999999974
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.2e-39 Score=353.73 Aligned_cols=260 Identities=26% Similarity=0.426 Sum_probs=203.3
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||.||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 4578999999999999999999864 368999887543 3345779999999999999999999998764 4578999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC-C
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE-T 892 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~-~ 892 (1029)
||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|...... .
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999878888999999999999999999999 677999999999999999999999999999765421 1
Q ss_pred CceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
........||+.|+|||++ ++.++|||||||++|||++|+.||......+.. ...+.. .......
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-~~~~~~-------~~~~~~~ 259 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-IFMVGR-------GYASPDL 259 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHH-------TCCCCCS
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH-HHHHhc-------CCCCcch
Confidence 2222345699999999974 455899999999999999999999753211110 000000 0000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
......++..+.+++.+||+.+|++||++.|++++++.+...+.
T Consensus 260 -------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 01112356789999999999999999999999999999987663
No 82
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.2e-38 Score=349.03 Aligned_cols=261 Identities=25% Similarity=0.421 Sum_probs=198.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhc--CCCCceEEEEEEEec----CCeE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGS--IRHRNLVKIISTCSS----DHFK 809 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~ 809 (1029)
..++|++.+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 356799999999999999999987 6899999998654 23455667777666 799999999998644 3567
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCEEECCCCcEEEEccCC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYD-----HPTPIIHCDLNPSNILLNESMVACLSDFGI 884 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~givH~Dlk~~Nill~~~~~~kl~Dfg~ 884 (1029)
++||||+++|+|.+++. ...+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+
T Consensus 82 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEehhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 89999999999999994 45799999999999999999999932 256799999999999999999999999999
Q ss_pred ceecCCCCCce---eccccCCccccCccCCCC----------CCcchhHHHHHHHHHhcC----------CCCCCccccc
Q 036879 885 SKLLGDETSMT---QTQTLATIGYMAPEWKLS----------RKGDVYSYGIILMETFTK----------KKPTDELFVG 941 (1029)
Q Consensus 885 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~----------~~~DvwSlGvil~elltg----------~~p~~~~~~~ 941 (1029)
|+......... .....||+.|+|||++.+ .++|||||||++|||++| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 98764433221 223479999999998533 479999999999999999 6776543322
Q ss_pred ccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHh
Q 036879 942 EISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKI 1011 (1029)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i 1011 (1029)
....... .............+.......++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 240 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDM---------RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHH---------HHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Ccchhhh---------hHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 2211111 010000000000011112234678899999999999999999999999999876
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=363.22 Aligned_cols=249 Identities=19% Similarity=0.266 Sum_probs=204.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..........+.+|+++++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999876 7899999999876555566889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC--CCCcEEEEccCCceecCCCCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN--ESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~--~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
+++|+|.+++......+++..+..++.||+.||+||| +.||+||||||+||+++ ..+.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999776668999999999999999999999 67899999999999997 457899999999987754332
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
.....||+.|+|||++ ++.++||||+||++|||++|+.||......+ ... .+......
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~-----------~i~~~~~~--- 268 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQ-----------NVKRCDWE--- 268 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHH-----------HHHHCCCC---
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHH-----------HHHhCCCC---
Confidence 2234699999999984 5678999999999999999999997532110 000 00000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........++.++.+++.+||..||++|||+.|++++
T Consensus 269 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 -FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000112346678999999999999999999999975
No 84
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-38 Score=350.12 Aligned_cols=249 Identities=27% Similarity=0.453 Sum_probs=202.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch-------hhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG-------TLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
.++|++.+.||+|+||+||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467889999999999999999975 7899999998654321 1267899999999999999999999997665
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEECCCCc-----EEEEc
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLNESMV-----ACLSD 881 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~~~~~-----~kl~D 881 (1029)
++||||+++++|.+++......+++..+..++.|++.|++||| +.| |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999888888999999999999999999999 778 999999999999988776 99999
Q ss_pred cCCceecCCCCCceeccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 882 FGISKLLGDETSMTQTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 882 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
||+++.... ......||+.|+|||++ ++.++||||+||++|||++|+.||...............
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~----- 243 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR----- 243 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH-----
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh-----
Confidence 999975433 23345689999999985 356899999999999999999999764322211111000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHh
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKI 1011 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i 1011 (1029)
. .......+..++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 244 ------~------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 ------E------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ------H------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ------c------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 0000111234567899999999999999999999999999764
No 85
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.7e-39 Score=361.36 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=200.2
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-----EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356899999999999999999875 79999999987532 113567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc---EEEEccCC
Q 036879 811 LVLEYMPNGSLENWMYNK---NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV---ACLSDFGI 884 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~---~kl~Dfg~ 884 (1029)
+||||+++++|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887543 345899999999999999999999 678999999999999986554 99999999
Q ss_pred ceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 885 SKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 885 a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
+........ ......||+.|+|||++ ++.++||||+||++|||++|+.||..... . . ....
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~----~--------~~~i 244 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--R----L--------FEGI 244 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--H----H--------HHHH
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--H----H--------HHHH
Confidence 987754322 23345799999999984 67899999999999999999999975210 0 0 0000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
... ...........++..+.+++.+||..||++|||+.|++++
T Consensus 245 ~~~----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 245 IKG----KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHT----CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcC----CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000011122356789999999999999999999999874
No 86
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=362.51 Aligned_cols=245 Identities=23% Similarity=0.304 Sum_probs=196.4
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999876 68999999998652 33456788999999988 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++... +.+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999998643 56999999999999999999999 67899999999999999999999999999986433
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.. .......||+.|+|||++ ++.++||||+||++|||++|+.||......+. . .......
T Consensus 177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-----~--------~~i~~~~-- 240 (353)
T 3txo_A 177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL-----F--------EAILNDE-- 240 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----H--------HHHHHCC--
T ss_pred CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH-----H--------HHHHcCC--
Confidence 22 223345799999999984 78899999999999999999999975321110 0 0000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH------HHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI------KEALT 1006 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~evl~ 1006 (1029)
...+...+..+.+++.+|++.||++||++ +|+++
T Consensus 241 ------~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 ------VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ------CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 01122346678999999999999999998 77776
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=361.51 Aligned_cols=246 Identities=25% Similarity=0.333 Sum_probs=200.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|||||++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357889999999999999999876 68999999997543 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+.+|+|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+......
T Consensus 94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999854 556999999999999999999999 7789999999999999999999999999998765432
Q ss_pred CceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
......||+.|+|||++ ++.++||||+||++|||++|+.||........ ... ...+...
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~---------~~~~~~~- 235 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEI---------VHTFETT- 235 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHH---------HHHHHHC-
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHH---------HHHHhhc-
Confidence 22346799999999985 56789999999999999999999964321110 000 0000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCC-HHHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERIN-IKEALT 1006 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-~~evl~ 1006 (1029)
....+..++..+.+++.+||+.||++||+ ++++.+
T Consensus 236 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ------VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ------ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 01112335678999999999999999998 777665
No 88
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-38 Score=352.09 Aligned_cols=274 Identities=24% Similarity=0.350 Sum_probs=202.1
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcC--CCCceEEEEEEEecC----C
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSI--RHRNLVKIISTCSSD----H 807 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~ 807 (1029)
....++|++.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 345678999999999999999999875 8999999986442 24455666666655 899999999999876 7
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CcEEcCCCCCCEEECCCCcEEE
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPT--------PIIHCDLNPSNILLNESMVACL 879 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~--------givH~Dlk~~Nill~~~~~~kl 879 (1029)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS--TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 88999999999999999954 36899999999999999999999 55 8999999999999999999999
Q ss_pred EccCCceecCCCCCce---eccccCCccccCccCCC----CCC------cchhHHHHHHHHHhcCCCCCCcccccccccc
Q 036879 880 SDFGISKLLGDETSMT---QTQTLATIGYMAPEWKL----SRK------GDVYSYGIILMETFTKKKPTDELFVGEISLK 946 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~----~~~------~DvwSlGvil~elltg~~p~~~~~~~~~~~~ 946 (1029)
+|||+|+.+....... .....||+.|+|||++. +.+ +|||||||++|||++|+.|+.........+.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999998764432221 12356999999999842 233 8999999999999999555433222222221
Q ss_pred hhchhcc-chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 947 SRVNDSL-HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 947 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
....... ...+.....................++..+.+++.+||+.||++|||+.|++++|+.+.++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1111110 011111111111111111111223678889999999999999999999999999999987653
No 89
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.4e-39 Score=365.47 Aligned_cols=264 Identities=22% Similarity=0.371 Sum_probs=210.0
Q ss_pred CHHHHHHHhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEE
Q 036879 729 SYQELFRATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKII 800 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~ 800 (1029)
....+....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3445556778999999999999999999974 256889999997653 33456799999999999 899999999
Q ss_pred EEEecCC-eEEEEEeccCCCCHHHHHhcCCC-------------------------------------------------
Q 036879 801 STCSSDH-FKALVLEYMPNGSLENWMYNKNR------------------------------------------------- 830 (1029)
Q Consensus 801 ~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------- 830 (1029)
+++.+.+ ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9998754 48999999999999999976432
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC-
Q 036879 831 ----------------SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS- 893 (1029)
Q Consensus 831 ----------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~- 893 (1029)
.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1889999999999999999999 77899999999999999999999999999986643322
Q ss_pred ceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.......||+.|+|||+ .++.++|||||||++|||++ |+.||......+. +. ..+...
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~------------~~~~~~---- 312 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC------------RRLKEG---- 312 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HH------------HHHHHT----
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HH------------HHHHcC----
Confidence 23334568899999997 36789999999999999998 9999975321111 00 000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.....+..++..+.+++.+||+.||++|||++|++++|+.+.+.
T Consensus 313 --~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 313 --TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 00111223466789999999999999999999999999998764
No 90
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.5e-39 Score=377.16 Aligned_cols=254 Identities=24% Similarity=0.441 Sum_probs=206.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||+||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 456788889999999999999999888999999997653 34678999999999999999999999986 5678999999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 99999999996543 36889999999999999999999 677999999999999999999999999999876443222
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......+++.|+|||++ ++.++|||||||++|||++ |+.||.+....+. ...+...
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~----- 401 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--------------IRALERG----- 401 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------------HHHHHHT-----
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcC-----
Confidence 22334567899999983 6789999999999999999 9999975321110 0000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
...+.+..++..+.+++.+||+.||++|||++++++.|+.+...
T Consensus 402 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 402 -YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 01112335678899999999999999999999999999877543
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=367.77 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=200.3
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
..++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567999999999999999999875 79999999997653 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC---CCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN---ESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~---~~~~~kl~Dfg~a~~~~ 889 (1029)
|||+++|+|.+++... ..+++..+..++.||+.|++||| ++||+||||||+||+++ .++.+||+|||+|....
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999998654 56999999999999999999999 77899999999999998 56889999999998765
Q ss_pred CCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
.... ......||+.|+|||++ ++.++||||+||++|+|++|++||......+ ... ....
T Consensus 165 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~~-----------~i~~--- 227 (444)
T 3soa_A 165 GEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LYQ-----------QIKA--- 227 (444)
T ss_dssp TTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHH-----------HHHH---
T ss_pred CCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HHH-----------HHHh---
Confidence 4322 22345799999999983 6789999999999999999999996531110 000 0000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.......+....++..+.+++.+|++.||++|||+.|++++
T Consensus 228 -~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 228 -GAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -TCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000001112346778999999999999999999999974
No 92
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7e-39 Score=361.41 Aligned_cols=261 Identities=23% Similarity=0.410 Sum_probs=208.2
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec------CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH 807 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 807 (1029)
...++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999874 34889999998654 334567999999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 036879 808 FKALVLEYMPNGSLENWMYNKN-----------------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDL 864 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dl 864 (1029)
..++||||+++|+|.+++.... ..+++..++.++.||++||+||| ++||+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999997642 56899999999999999999999 778999999
Q ss_pred CCCCEEECCCCcEEEEccCCceecCCCCC-ceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcc
Q 036879 865 NPSNILLNESMVACLSDFGISKLLGDETS-MTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDEL 938 (1029)
Q Consensus 865 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~ 938 (1029)
||+||+++.++.+||+|||+++....... .......+|+.|+|||+ .++.++|||||||++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999986543221 12233567899999997 46789999999999999999 99998753
Q ss_pred cccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccc
Q 036879 939 FVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTN 1018 (1029)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~ 1018 (1029)
...+. . ....+... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+....+
T Consensus 281 ~~~~~--~-----------~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 281 AHEEV--I-----------YYVRDGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp CHHHH--H-----------HHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred ChHHH--H-----------HHHhCCCc-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 21110 0 00000000 0112345678999999999999999999999999999988776543
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.6e-38 Score=349.65 Aligned_cols=265 Identities=21% Similarity=0.305 Sum_probs=201.0
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999976 68999999997653 2335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++ ++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9964 777777676778999999999999999999999 67899999999999999999999999999987654322
Q ss_pred eeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh---ccchhhhhhh---hh
Q 036879 895 TQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND---SLHGKIINVV---DI 963 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~---d~ 963 (1029)
......||+.|+|||++ ++.++||||+||++|||++|+.||.........+...... .....+.... +.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 23345789999999973 5778999999999999999988864322111111111000 0000000000 00
Q ss_pred h---hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 964 N---LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 964 ~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ..............++..+.+++.+|++.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0000000011112346778999999999999999999999874
No 94
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-38 Score=361.15 Aligned_cols=271 Identities=16% Similarity=0.204 Sum_probs=206.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecC------CcEEEEEEeecccchh-----------hHHHHHHHHHHhcCCCCceEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSD------GMQIAVKVFNLELEGT-----------LRSFDAECEILGSIRHRNLVK 798 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 798 (1029)
..++|++.+.||+|+||.||+|++.. ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998754 4789999987653211 123445666778889999999
Q ss_pred EEEEEecC----CeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC--
Q 036879 799 IISTCSSD----HFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN-- 872 (1029)
Q Consensus 799 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~-- 872 (1029)
+++++... ...++||||+ +++|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 4579999999 99999999887788999999999999999999999 67899999999999999
Q ss_pred CCCcEEEEccCCceecCCCCCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccc
Q 036879 873 ESMVACLSDFGISKLLGDETSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGE 942 (1029)
Q Consensus 873 ~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~ 942 (1029)
.++.+||+|||+|+.+...... ......||+.|+|||++ ++.++|||||||++|||++|+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8999999999999876432111 11234599999999984 5678999999999999999999997532211
Q ss_pred cccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccccc
Q 036879 943 ISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIE 1020 (1029)
Q Consensus 943 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~ 1020 (1029)
. +...........+.+..+..+. ...++.++.+++..||+.+|++||+++++++.|+++.+......+
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 269 K-YVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp H-HHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred H-HHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 1 1111111111111111111110 023477899999999999999999999999999999887655443
No 95
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=363.34 Aligned_cols=258 Identities=24% Similarity=0.421 Sum_probs=209.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec--------CCcEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS--------DGMQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSS 805 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 805 (1029)
..++|.+.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3467888999999999999999852 34679999997654 33457789999999999 99999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEE
Q 036879 806 DHFKALVLEYMPNGSLENWMYNKN---------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNIL 870 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nil 870 (1029)
++..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEE
Confidence 999999999999999999997654 35899999999999999999999 678999999999999
Q ss_pred ECCCCcEEEEccCCceecCCCCC-ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccc
Q 036879 871 LNESMVACLSDFGISKLLGDETS-MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEIS 944 (1029)
Q Consensus 871 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 944 (1029)
++.++.+||+|||+|+....... .......+|+.|+|||++ ++.++|||||||++|||++ |+.||......+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-- 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 99999999999999987654322 223334578899999984 6778999999999999999 999987532111
Q ss_pred cchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 945 LKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
+. ..+.... ....+..++.++.+++.+||+.||++|||++|++++|+++.....
T Consensus 302 ~~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 302 LF------------KLLKEGH------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HH------------HHHHTTC------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HH------------HHHHcCC------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 00 0000000 011122356779999999999999999999999999999987654
No 96
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2e-38 Score=358.95 Aligned_cols=248 Identities=22% Similarity=0.342 Sum_probs=200.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999876 78999999997653 234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC---CcEEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES---MVACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~---~~~kl~Dfg~a~~~~~ 890 (1029)
||+++|+|.+++.. ...+++..+..++.||+.||+||| +.||+||||||+||+++.+ +.+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999998854 456899999999999999999999 6789999999999999864 4599999999987654
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+ ... .. ..
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~~~---~i--------~~---- 244 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYA---QI--------KA---- 244 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH---HH--------HH----
T ss_pred Ccc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHH---HH--------Hh----
Confidence 322 2345799999999983 6779999999999999999999996531110 000 00 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
............++..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 245 GAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp TCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000001112346778999999999999999999999875
No 97
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=360.78 Aligned_cols=243 Identities=21% Similarity=0.308 Sum_probs=195.0
Q ss_pred CceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEeccCCCCH
Q 036879 743 NNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYMPNGSL 821 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 821 (1029)
.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 578999999999999875 7999999999876656677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE--CCCCcEEEEccCCceecCCCCCceeccc
Q 036879 822 ENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL--NESMVACLSDFGISKLLGDETSMTQTQT 899 (1029)
Q Consensus 822 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 899 (1029)
.+++......+++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||+|||+++....... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~ 248 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVN 248 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccc
Confidence 9999777777999999999999999999999 7789999999999999 6778999999999987754332 2235
Q ss_pred cCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHH
Q 036879 900 LATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTA 975 (1029)
Q Consensus 900 ~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 975 (1029)
.||+.|+|||++ ++.++|||||||++|||++|+.||......+. +......... .....
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------------~~~i~~~~~~----~~~~~ 311 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-------------LNNILACRWD----LEDEE 311 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHTCCC----SCSGG
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHhccCC----CChhh
Confidence 699999999974 56689999999999999999999975321110 0011100000 00011
Q ss_pred HHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 976 KEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 976 ~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...++.++.+++.+|++.||++|||+.|++++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12346778999999999999999999999983
No 98
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-38 Score=355.72 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=199.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999876 78999999987543 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC-C
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET-S 893 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 893 (1029)
|+++|+|.+++. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..+.... .
T Consensus 86 ~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999884 4456999999999999999999999 7789999999999999999999999999998654221 1
Q ss_pred ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.......||+.|+|||++ .+.++||||+||++|||++|+.||.........+..+.... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~------------~--- 226 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------------T--- 226 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC------------T---
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc------------c---
Confidence 122345799999999984 35579999999999999999999976432222111111100 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.......++..+.+++.+||+.||++|||++|++++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 ---YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 001112346678899999999999999999999875
No 99
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.5e-39 Score=350.69 Aligned_cols=264 Identities=23% Similarity=0.330 Sum_probs=199.4
Q ss_pred CCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
++|++.+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999988899999999875532 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 975 999999777778999999999999999999999 67899999999999999999999999999987643221 2
Q ss_pred eccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch---hccchhhhhhh-----h
Q 036879 896 QTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN---DSLHGKIINVV-----D 962 (1029)
Q Consensus 896 ~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----d 962 (1029)
.....+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +..... ......+.... +
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCChhhchhhhcccccc
Confidence 2335689999999973 57789999999999999999999976322111 000000 00000000000 0
Q ss_pred hhhhh-hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 963 INLLQ-KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 963 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..... ...........++..+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 0000001112346678999999999999999999999874
No 100
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=370.36 Aligned_cols=329 Identities=21% Similarity=0.222 Sum_probs=225.5
Q ss_pred ccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCC
Q 036879 317 NLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLP 396 (1029)
Q Consensus 317 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 396 (1029)
+|+.|+|++|++++..+..|.++++|++|++++|.+.+..|..+ .++++|++|+|++|++++..+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---------------~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAF---------------NNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT---------------TTCTTCCEEECCSSCCCSCCT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhh---------------hCCccCCEEECCCCcCCccCc
Confidence 44444444444444444444444444444444444444333322 244555555555555554444
Q ss_pred ccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCC
Q 036879 397 ISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLR 476 (1029)
Q Consensus 397 ~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 476 (1029)
..|.++.+ |++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..++
T Consensus 98 ~~~~~l~~-L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 176 (477)
T 2id5_A 98 GVFTGLSN-LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176 (477)
T ss_dssp TSSTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCT
T ss_pred ccccCCCC-CCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccC
Confidence 44445444 56666666666655666666666777777777777666666666677777777777777666666666777
Q ss_pred CCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEcc
Q 036879 477 SLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLS 556 (1029)
Q Consensus 477 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 556 (1029)
+|+.|++++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|+
T Consensus 177 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 256 (477)
T 2id5_A 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256 (477)
T ss_dssp TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECC
T ss_pred CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECC
Confidence 77777777777776667777778888888888877766666666666688888888888886555678888888888888
Q ss_pred CCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCC
Q 036879 557 RNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQV 636 (1029)
Q Consensus 557 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 636 (1029)
+|.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+.+
T Consensus 257 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 88888777778888888888888888888888888888888999999999988777778888888999999999888765
Q ss_pred CCCCCCCccCcccccCCCCCCCCCC
Q 036879 637 PHGGPFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 637 ~~~~~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
+....+.......+.++...|++|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 337 RLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp GGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred chHhHHhhhhccccCccCceeCCch
Confidence 4321122333455677788887764
No 101
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.6e-39 Score=357.98 Aligned_cols=244 Identities=25% Similarity=0.389 Sum_probs=199.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 467999999999999999999974 78999999997542 22345789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+ +|+|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 78999988653 56899999999999999999999 6679999999999999999999999999998765432
Q ss_pred CceeccccCCccccCccCCC-----CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWKL-----SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~~-----~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. .....||+.|+|||++. +.++||||+||++|||++|+.||.+...... ...+...
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i~~~--------------- 223 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FKKVNSC--------------- 223 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BCCCCSS---------------
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HHHHHcC---------------
Confidence 2 23356999999999852 5689999999999999999999976322111 1000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
....+..++..+.+++.+|++.||++|||++|++++-
T Consensus 224 ----~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 224 ----VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp ----CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred ----CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 0011123456789999999999999999999998853
No 102
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=350.43 Aligned_cols=270 Identities=20% Similarity=0.269 Sum_probs=206.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC--eEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH--FKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 356889999999999999999976 68999999997543 334567889999999999999999999997754 77999
Q ss_pred EeccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE----CCCCcEEEEccCCce
Q 036879 813 LEYMPNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL----NESMVACLSDFGISK 886 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill----~~~~~~kl~Dfg~a~ 886 (1029)
|||+++++|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976433 3899999999999999999999 7789999999999999 788899999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
....... .....||+.|+|||++ ++.++|||||||++|||++|+.||........ ..........
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR-NKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG-CHHHHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch-hHHHHHHHhc
Confidence 7754432 2235699999999963 56789999999999999999999964322111 1111111100
Q ss_pred hhh----hhh---hhhh--hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhH
Q 036879 955 GKI----INV---VDIN--LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIR 1012 (1029)
Q Consensus 955 ~~~----~~~---~d~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~ 1012 (1029)
+.. ... .... ...............+..+.+++.+||+.||++|||++|++++..+..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 000 000 0000 000000111223566788999999999999999999999999987654
No 103
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=365.04 Aligned_cols=257 Identities=25% Similarity=0.389 Sum_probs=205.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec------CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||+||+|++. +++.||||+++... ......+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888999999999999999843 46789999997543 34456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC---cEEEE
Q 036879 810 ALVLEYMPNGSLENWMYNKN------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM---VACLS 880 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~---~~kl~ 880 (1029)
++||||+++|+|.+++.... ..+++..++.++.||+.||+||| ++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997543 45899999999999999999999 77899999999999999554 59999
Q ss_pred ccCCceecCCC-CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccc
Q 036879 881 DFGISKLLGDE-TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 881 Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
|||+|+..... .........+|+.|+|||++ ++.++|||||||++|||++ |+.||......+ ..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~-------- 296 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL-------- 296 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH--------
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH--------
Confidence 99999754221 11222335678999999984 6789999999999999998 999987532111 00
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 955 GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 955 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
+.+... .....+..++..+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 297 ----~~i~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 297 ----EFVTSG------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp ----HHHHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred ----HHHHcC------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 000000 0011123456778999999999999999999999999999887543
No 104
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-38 Score=352.78 Aligned_cols=267 Identities=22% Similarity=0.398 Sum_probs=205.2
Q ss_pred hCCCCCCceeccCcceEEEEEEe-----cCCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecC--Ce
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-----SDGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSD--HF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 808 (1029)
.+.|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 34588889999999999999984 368999999997553 33457789999999999999999999999876 66
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 89999999999999999777778999999999999999999999 778999999999999999999999999999877
Q ss_pred CCCCC--ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch-hccchhhhhhh
Q 036879 889 GDETS--MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN-DSLHGKIINVV 961 (1029)
Q Consensus 889 ~~~~~--~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 961 (1029)
..... .......+|..|+|||.+ ++.++||||+||++|||++|+.|+............... ......+...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 54432 122335678889999984 567899999999999999999987543211000000000 00000000000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIR 1012 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~ 1012 (1029)
. .......+..++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 257 ~------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 K------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp H------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 00011122345678999999999999999999999999999875
No 105
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-38 Score=376.71 Aligned_cols=253 Identities=24% Similarity=0.434 Sum_probs=208.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|++. ++..||||+++... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 456788899999999999999987 48899999997653 3457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999764 356899999999999999999999 677999999999999999999999999999876544333
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......+++.|+|||++ ++.++|||||||++|||++ |+.||......+. . +.+...
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--~------------~~~~~~----- 435 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--Y------------ELLEKD----- 435 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--H------------HHHHTT-----
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--H------------HHHHcC-----
Confidence 33344567899999984 6789999999999999999 9999875321110 0 111100
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
.....+..++..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 436 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 -YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 0111233467789999999999999999999999999987653
No 106
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.7e-38 Score=368.88 Aligned_cols=249 Identities=29% Similarity=0.472 Sum_probs=203.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC-eEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH-FKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E 814 (1029)
..++|++.+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4567888999999999999999885 7899999997553 4578999999999999999999999987654 7899999
Q ss_pred ccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 815 YMPNGSLENWMYNKNR-SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
|+++|+|.+++..... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999976554 3799999999999999999999 677999999999999999999999999999864322
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.....+++.|+|||++ ++.++|||||||++|||++ |+.||......+. ... +..
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~------------i~~----- 401 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPR------------VEK----- 401 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHH------------HHT-----
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH------------HHc-----
Confidence 1223578899999984 6778999999999999998 9999975321111 000 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
......+..++..+.++|.+||+.||++|||+.++++.|+.+...
T Consensus 402 -~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 -GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 001122345678899999999999999999999999999998753
No 107
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=362.24 Aligned_cols=255 Identities=21% Similarity=0.261 Sum_probs=198.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||+||+|+.. +++.||+|++++.. ....+.+.+|..+++++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3467999999999999999999976 68899999998653 23345688999999887 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++.. .+.+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999864 356999999999999999999999 77899999999999999999999999999986332
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.. .......||+.|+|||++ ++.++||||+||++|||++|+.||......+..... ....+...+..
T Consensus 206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~-----~~~~~~~~i~~--- 276 (396)
T 4dc2_A 206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN-----TEDYLFQVILE--- 276 (396)
T ss_dssp TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C-----CHHHHHHHHHH---
T ss_pred CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh-----hHHHHHHHHhc---
Confidence 22 223346799999999984 677899999999999999999999653211110000 00000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH------HHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI------KEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~evl~~ 1007 (1029)
.....+..++..+.+++.+||+.||++||++ +|++++
T Consensus 277 ----~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 277 ----KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ----cccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 0011223456778999999999999999985 566653
No 108
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-38 Score=345.31 Aligned_cols=261 Identities=24% Similarity=0.425 Sum_probs=210.8
Q ss_pred CCCCCCc-eeccCcceEEEEEEec---CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 738 DGFSENN-LLGKGSFGSVYKGTLS---DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 738 ~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
++|.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 4566665 8999999999999853 67889999998653 345677999999999999999999999994 5568999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999777778999999999999999999999 6789999999999999999999999999998775433
Q ss_pred Cce--eccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 SMT--QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ~~~--~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
... .....+|+.|+|||+. ++.++|||||||++|||++ |+.||......+. .. .+...
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~------------~i~~~- 229 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MA------------FIEQG- 229 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--HH------------HHHTT-
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--HH------------HHhcC-
Confidence 221 2233468899999984 5778999999999999998 9999975321110 00 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccccCC
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIENS 1022 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~~~ 1022 (1029)
.....+..++..+.+++.+||+.||++||++.|++++|+.+..+...+.+..
T Consensus 230 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~ 281 (287)
T 1u59_A 230 -----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 281 (287)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred -----CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCC
Confidence 0011123456789999999999999999999999999999998877665543
No 109
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-38 Score=356.52 Aligned_cols=254 Identities=25% Similarity=0.457 Sum_probs=199.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcE----EEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQ----IAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
.++|++.+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 456888999999999999999864 4444 5888775443 334577999999999999999999999998765 67
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+.+|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999888888999999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCc-eeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 891 ETSM-TQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 891 ~~~~-~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
.... ......+|+.|+|||+ .++.++|||||||++|||++ |+.||......+. . ..+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~------------~~~~~~ 235 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--S------------SILEKG 235 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H------------HHHHTT
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--H------------HHHHcC
Confidence 3222 2233456889999998 36789999999999999999 9999976322111 0 111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
. ....+..++..+.+++.+||+.||++|||++|++++|+.+.+.
T Consensus 236 ~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 236 E------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp C------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred C------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0 0111233566789999999999999999999999999988764
No 110
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-38 Score=350.47 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=200.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 457889999999999999999976 79999999997653 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999999965 456899999999999999999999 788999999999999999999999999999876432
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.....||+.|+|||++ ++.++||||+||++|||++|+.||........ ........
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------------~~~i~~~~---- 219 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-------------YEKILNAE---- 219 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHCC----
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHhCC----
Confidence 1235699999999984 67899999999999999999999965311100 00111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1007 (1029)
...+..++.++.+++.+|+..||++|| +++|++++
T Consensus 220 ----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 ----LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 011223466789999999999999999 89999864
No 111
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=351.37 Aligned_cols=246 Identities=24% Similarity=0.322 Sum_probs=193.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--------------------------hhhHHHHHHHHHHh
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--------------------------GTLRSFDAECEILG 789 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 789 (1029)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467999999999999999999875 789999999875421 12356889999999
Q ss_pred cCCCCceEEEEEEEec--CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCC
Q 036879 790 SIRHRNLVKIISTCSS--DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPS 867 (1029)
Q Consensus 790 ~l~h~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~ 867 (1029)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.|++.||+||| +.||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 56889999999999998754 3457999999999999999999999 677999999999
Q ss_pred CEEECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCCC-------CCCcchhHHHHHHHHHhcCCCCCCcccc
Q 036879 868 NILLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKL-------SRKGDVYSYGIILMETFTKKKPTDELFV 940 (1029)
Q Consensus 868 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~DvwSlGvil~elltg~~p~~~~~~ 940 (1029)
||+++.++.+||+|||+++....... ......||+.|+|||.+. +.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999987654322 233457999999999853 4568999999999999999999965311
Q ss_pred cccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 941 GEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.. ... . ...... . .+....++..+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~-----~~~-----~---~~~~~~-~-----~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 MC-----LHS-----K---IKSQAL-E-----FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH-----HHH-----H---HHHCCC-C-----CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH-----HHH-----H---HhcccC-C-----CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 10 000 0 000000 0 00012345678999999999999999999999864
No 112
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.3e-38 Score=346.34 Aligned_cols=255 Identities=24% Similarity=0.428 Sum_probs=202.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEecC----CcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSD----GMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||+||+|++.. +..||+|.+.... ....+.+.+|+++++.++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 35678889999999999999998642 3469999988653 34467899999999999999999999998754 468
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877778999999999999999999999 77899999999999999999999999999987654
Q ss_pred CCCceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
..........+++.|+|||+ .++.++||||||+++|||++ |+.||........ .. .+...
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--~~------------~~~~~- 230 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--IG------------VLEKG- 230 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--HH------------HHHHT-
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--HH------------HHhcC-
Confidence 43333344567889999997 36778999999999999998 9999864321111 00 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.....+..++..+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 231 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 231 -----DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 00011223467789999999999999999999999999988764
No 113
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.2e-38 Score=351.30 Aligned_cols=256 Identities=24% Similarity=0.425 Sum_probs=208.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
..++|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356788899999999999999986 245889999997653 3445778999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCC
Q 036879 809 KALVLEYMPNGSLENWMYNKN-----------------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLN 865 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk 865 (1029)
.++||||+++++|.+++.... ..+++..+..++.|+++||+||| +.||+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 999999999999999997643 23889999999999999999999 6779999999
Q ss_pred CCCEEECCCCcEEEEccCCceecCCCCCc-eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCccc
Q 036879 866 PSNILLNESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELF 939 (1029)
Q Consensus 866 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~ 939 (1029)
|+||+++.++.+||+|||++......... ......+++.|+|||.. ++.++||||+||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876543322 22334578899999984 6789999999999999999 999997532
Q ss_pred ccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 940 VGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.... .. .+.... ....+..++..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 258 ~~~~--~~------------~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PERL--FN------------LLKTGH------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGGH--HH------------HHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHH--HH------------HhhcCC------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2111 00 000000 0111223567899999999999999999999999999998764
No 114
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-38 Score=357.05 Aligned_cols=272 Identities=25% Similarity=0.343 Sum_probs=209.9
Q ss_pred hCCCCCCceeccCcceEEEEEEe-----cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEe--cCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-----SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCS--SDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 809 (1029)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46788899999999999999984 368899999998776666778999999999999999999999886 45678
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999776667999999999999999999999 6789999999999999999999999999998775
Q ss_pred CCCCc--eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhh
Q 036879 890 DETSM--TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDI 963 (1029)
Q Consensus 890 ~~~~~--~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 963 (1029)
..... ......+|+.|+|||++ ++.++||||+||++|||++|+.||............. ...........+.
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC--ERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccc--ccccccHHHHHHH
Confidence 43322 22334578889999984 5778999999999999999999986532211100000 0000000111110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 964 NLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
.. .......+..++..+.+++.+||+.||++|||++|++++|+.+.....
T Consensus 257 ~~---~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 LE---EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HH---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hh---cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 00 000111233467789999999999999999999999999999876554
No 115
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-38 Score=372.35 Aligned_cols=255 Identities=27% Similarity=0.446 Sum_probs=201.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 345688889999999999999999888889999997653 234679999999999999999999999976 668999999
Q ss_pred cCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 9999999999653 356899999999999999999999 677999999999999999999999999999876543333
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......+++.|+|||.+ ++.++|||||||++|||++ |+.||.+....+. . +.+...
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~------------~~i~~~----- 397 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--L------------DQVERG----- 397 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--H------------HHHHTT-----
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--H------------HHHHcC-----
Confidence 33344578899999973 6789999999999999999 9999875321110 0 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
...+.+..++..+.+++.+||+.||++|||++++++.|+.+....
T Consensus 398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 011123356778999999999999999999999999998876543
No 116
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.4e-39 Score=358.12 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=199.1
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCe
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 808 (1029)
....++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345688999999999999999999976 68999999998653 33456678899999876 99999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.|+||||+++|+|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999999864 346899999999999999999999 678999999999999999999999999999864
Q ss_pred CCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
..... ......||+.|+|||++ ++.++||||+||++|||++|+.||......+. .. ....
T Consensus 169 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~--------~i~~-- 232 (345)
T 1xjd_A 169 MLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-----FH--------SIRM-- 232 (345)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HH--------HHHH--
T ss_pred ccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-----HH--------HHHh--
Confidence 33222 23346799999999984 67789999999999999999999975321100 00 0000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHH-HHHH
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIK-EALT 1006 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~-evl~ 1006 (1029)
.. ...+..++..+.+++.+|+..||++||++. |+++
T Consensus 233 --~~----~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 233 --DN----PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp --CC----CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --CC----CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 00 011123467789999999999999999997 6654
No 117
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-38 Score=350.63 Aligned_cols=256 Identities=24% Similarity=0.434 Sum_probs=211.6
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
..++|++.+.||+|+||.||+|.+. ++..||+|.+... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4667889999999999999999976 5889999998754 3345778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 815 YMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
|+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 99999999999764 356899999999999999999999 66799999999999999999999999999987765544
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.......+++.|+|||.. ++.++||||+|+++|+|++ |+.||........ . +.+....
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~--~------------~~~~~~~--- 229 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--Y------------ELLEKDY--- 229 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--H------------HHHHTTC---
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--H------------HHHhccC---
Confidence 444445678899999983 6778999999999999999 9999875321111 0 0010000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
....+..++..+.+++.+|++.||++|||++|+++.|+.+....
T Consensus 230 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 230 ---RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01112345677999999999999999999999999999887654
No 118
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.2e-38 Score=344.58 Aligned_cols=250 Identities=25% Similarity=0.430 Sum_probs=190.3
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc----hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE----GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999974 88999999875432 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC--------CCcEEEEccCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE--------SMVACLSDFGI 884 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~--------~~~~kl~Dfg~ 884 (1029)
|||+++++|.+++. ...+++..+..++.|++.|++|||..+..+|+||||||+||+++. ++.+||+|||.
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 99999999999884 457899999999999999999999433223999999999999986 78899999999
Q ss_pred ceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 885 SKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 885 a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
+........ ....|++.|+|||.. ++.++||||+|+++|||++|+.||.......... ..
T Consensus 163 ~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-------------~~ 226 (271)
T 3dtc_A 163 AREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-------------GV 226 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-------------HH
T ss_pred ccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------hh
Confidence 986644322 234689999999983 6778999999999999999999997532111100 00
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHh
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKI 1011 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i 1011 (1029)
.... .....+..++..+.+++.+||+.||++|||+.|++++|+++
T Consensus 227 ~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNK------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCC------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0000 00111233567799999999999999999999999999764
No 119
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8e-38 Score=350.99 Aligned_cols=246 Identities=24% Similarity=0.354 Sum_probs=194.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC-------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH------- 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 807 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999986 89999999997543 335578999999999999999999999985543
Q ss_pred --------------------------------------------------eEEEEEeccCCCCHHHHHhcCCC--CCCHH
Q 036879 808 --------------------------------------------------FKALVLEYMPNGSLENWMYNKNR--SFDIL 835 (1029)
Q Consensus 808 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~--~~~~~ 835 (1029)
..++||||+++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976432 35666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC-----------ceeccccCCcc
Q 036879 836 QRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS-----------MTQTQTLATIG 904 (1029)
Q Consensus 836 ~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~gt~~ 904 (1029)
.+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 77899999999999999999999999999987754321 12233569999
Q ss_pred ccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHH
Q 036879 905 YMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCV 980 (1029)
Q Consensus 905 y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 980 (1029)
|+|||++ ++.++||||+||++|||++|..|+..... ....... ..........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~---------------~~~~~~~-------~~~~~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR---------------IITDVRN-------LKFPLLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH---------------HHHHHHT-------TCCCHHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH---------------HHHHhhc-------cCCCcccccCC
Confidence 9999983 67899999999999999998776432100 0000000 01112223455
Q ss_pred HHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 981 SSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 981 ~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
+.+.+++.+||+.||++|||++|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 677999999999999999999999874
No 120
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.5e-39 Score=352.35 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=200.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CC-------cEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DG-------MQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
.++|++.+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457888999999999999999865 33 5799999987766667889999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc--------EEEE
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV--------ACLS 880 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~--------~kl~ 880 (1029)
.++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999877667999999999999999999999 777999999999999998887 9999
Q ss_pred ccCCceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 881 DFGISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 881 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
|||.+...... ....+++.|+|||++ ++.++||||+||++|||++|+.|+..........
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~---------- 228 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL---------- 228 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----------
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH----------
Confidence 99998754321 224578899999973 5778999999999999999655543211110000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
..... ....+...+..+.+++.+||+.||++|||++|++++|+++....
T Consensus 229 ---~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 229 ---QFYED--------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ---HHHHT--------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ---HHhhc--------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 00000 00001122456889999999999999999999999998886543
No 121
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.2e-38 Score=348.51 Aligned_cols=265 Identities=25% Similarity=0.372 Sum_probs=187.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 68999999997653 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 815 YMPNGSLENWMYNKN-----RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|++ ++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999886432 45899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh---ccchhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND---SLHGKIINVV 961 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 961 (1029)
.... ......+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +...... .....+....
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ-LKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCTTTCGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhHhhhhh
Confidence 3322 22345689999999973 57789999999999999999999975322111 0000000 0000000000
Q ss_pred h-----hhhhhh------hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 962 D-----INLLQK------EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 962 d-----~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ...... .......+..++..+.+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 000000 000000111345679999999999999999999999975
No 122
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.2e-38 Score=351.59 Aligned_cols=268 Identities=22% Similarity=0.381 Sum_probs=208.0
Q ss_pred CCCCceeccCcceEEEEEEec-----CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEec--CCeEEE
Q 036879 740 FSENNLLGKGSFGSVYKGTLS-----DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSS--DHFKAL 811 (1029)
Q Consensus 740 ~~~~~~lg~G~fg~V~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 811 (1029)
|++.+.||+|+||+||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988642 68899999998654 2345679999999999999999999999987 467899
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++++|.+++... .+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999998543 4899999999999999999999 778999999999999999999999999999877544
Q ss_pred CCc--eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc-chhhhhhhhhh
Q 036879 892 TSM--TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL-HGKIINVVDIN 964 (1029)
Q Consensus 892 ~~~--~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~ 964 (1029)
... ......+|+.|+|||++ ++.++||||+||++|||++|+.||............+..... ...+.+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 321 22334578889999984 567899999999999999999998753222111111111000 00011111111
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccc
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTN 1018 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~ 1018 (1029)
.....+..++..+.+++.+||+.||++|||++|+++.|+.+.+.+...
T Consensus 268 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 268 ------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 011123346778999999999999999999999999999999887544
No 123
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=348.70 Aligned_cols=243 Identities=22% Similarity=0.208 Sum_probs=193.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.++||+|+||+||+|+.. +|+.||||++..... ........|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999986 799999999865432 2233445555555544 999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 77999999877778999999999999999999999 6779999999999999999999999999998765432
Q ss_pred CceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......||++|+|||++ ++.++|||||||++|||++|..|+..... ... .....
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~------------~~~~~----- 268 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQ------------LRQGY----- 268 (311)
T ss_dssp -----CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHH------------HTTTC-----
T ss_pred --CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHH------------HhccC-----
Confidence 22345689999999984 57789999999999999999776543110 000 00000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.....+..++.++.+++.+||+.||++|||++|++++
T Consensus 269 -~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 269 -LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0111223456789999999999999999999999874
No 124
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.2e-38 Score=351.07 Aligned_cols=260 Identities=23% Similarity=0.400 Sum_probs=210.4
Q ss_pred HhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeecccc-hhhHHHHHHHHHHhcC-CCCceEEEEEEEecCC
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLELE-GTLRSFDAECEILGSI-RHRNLVKIISTCSSDH 807 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 807 (1029)
..++|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788999999999999999985 2578899999986543 3457799999999999 9999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEE
Q 036879 808 FKALVLEYMPNGSLENWMYNKNR-----------------SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNIL 870 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nil 870 (1029)
..++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEE
Confidence 99999999999999999976543 4899999999999999999999 678999999999999
Q ss_pred ECCCCcEEEEccCCceecCCCCCc-eeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccc
Q 036879 871 LNESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEIS 944 (1029)
Q Consensus 871 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 944 (1029)
++.++.+||+|||++......... ......+|+.|+|||. .++.++|||||||++|||++ |+.||........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-
Confidence 999999999999999876544322 2233457889999997 36778999999999999999 9999875321111
Q ss_pred cchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 945 LKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
. ...+..... ...+..++..+.+++.+||+.||++|||+.|++++|+++..+...
T Consensus 257 ~------------~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 257 F------------YKMIKEGFR------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp H------------HHHHHHTCC------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred H------------HHHhccCCC------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 0 001100000 001123467789999999999999999999999999998876543
No 125
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.3e-38 Score=352.60 Aligned_cols=258 Identities=24% Similarity=0.436 Sum_probs=191.6
Q ss_pred HhCCCCCCceeccCcceEEEEEEecC-C---cEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSD-G---MQIAVKVFNLE--LEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~-~---~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
..++|++.+.||+|+||.||+|++.. + ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999998753 3 27999999765 344567899999999999999999999999876655
Q ss_pred ------EEEEeccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEE
Q 036879 810 ------ALVLEYMPNGSLENWMYNKN-----RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVAC 878 (1029)
Q Consensus 810 ------~lV~E~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~k 878 (1029)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 89999999999999985432 25899999999999999999999 77899999999999999999999
Q ss_pred EEccCCceecCCCCCc-eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhc
Q 036879 879 LSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 879 l~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
|+|||+++........ ......+++.|+|||.+ ++.++|||||||++|||++ |+.||......+. ..
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~----- 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YN----- 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HH-----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HH-----
Confidence 9999999876443221 22234567899999983 6789999999999999999 8999876322111 00
Q ss_pred cchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 953 LHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 953 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
...... ....+..++..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 251 ------~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 251 ------YLIGGN-------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp ------HHHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ------HHhcCC-------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 000000 011122356779999999999999999999999999999987554
No 126
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.9e-38 Score=343.53 Aligned_cols=248 Identities=24% Similarity=0.362 Sum_probs=201.9
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecC--CeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSD--HFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|++. ++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457889999999999999999984 8899999997653 33456799999999999999999999999876 778999
Q ss_pred EeccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNKNR-SFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999976544 5899999999999999999999 777 9999999999999999999999999875432
Q ss_pred CCCCceeccccCCccccCccCCC----CC---CcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWKL----SR---KGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~~----~~---~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
. ....+|+.|+|||.+. +. ++|||||||++|||++|+.||......+.. .....
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------------~~~~~ 225 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG-------------MKVAL 225 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH-------------HHHHH
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH-------------HHHHh
Confidence 2 2346899999999842 22 699999999999999999999753211110 00000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
.. .....+..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 226 ~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 EG------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp SC------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred cC------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00 0011123356779999999999999999999999999998764
No 127
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.7e-38 Score=341.45 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=203.8
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456899999999999999999876 6789999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecCCCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
+++++|.+++.. ...+++..+..++.|++.|++||| ++||+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999999998854 455899999999999999999999 7789999999999999 788999999999998765433
Q ss_pred CceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
. .....||+.|+|||.+ ++.++||||+|+++|||++|+.||......+. ....... ..
T Consensus 164 ~--~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------------~~~~~~~----~~ 224 (277)
T 3f3z_A 164 M--MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-------------MLKIREG----TF 224 (277)
T ss_dssp C--BCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHC----CC
T ss_pred c--hhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-------------HHHHHhC----CC
Confidence 2 2335699999999984 68899999999999999999999975321111 0000000 00
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.........++..+.+++.+|++.||++|||+.|++++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011112356789999999999999999999999974
No 128
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.5e-38 Score=347.80 Aligned_cols=264 Identities=22% Similarity=0.255 Sum_probs=197.6
Q ss_pred hCCCCCC-ceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSEN-NLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.+.|++. +.||+|+||.||+|+.. +++.||||++........+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 78999999999999865 7999999999876655667899999999885 7999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc---EEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV---ACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 890 (1029)
||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998653 56899999999999999999999 678999999999999998776 99999999976532
Q ss_pred CCC------ceeccccCCccccCccCC---------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 891 ETS------MTQTQTLATIGYMAPEWK---------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 891 ~~~------~~~~~~~gt~~y~aPE~~---------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
... .......||+.|+|||++ ++.++||||+||++|||++|+.||......+..+.. .....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~ 243 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACP 243 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccch
Confidence 211 111234589999999974 578999999999999999999999764332221111 00000
Q ss_pred h-hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 956 K-IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 956 ~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ......................++..+.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0 000000000000000011112356789999999999999999999999985
No 129
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.8e-38 Score=353.96 Aligned_cols=254 Identities=21% Similarity=0.268 Sum_probs=199.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 811 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|.++++++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 356888999999999999999976 68999999998653 33456788999999988 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998643 56899999999999999999999 678999999999999999999999999999864322
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.. ......||+.|+|||++ ++.++||||+||++|||++|+.||........... .....+...+..
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~~~~~~~~~i~~---- 233 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-----NTEDYLFQVILE---- 233 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------CHHHHHHHHHH----
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc-----ccHHHHHHHHHc----
Confidence 22 23345799999999984 67789999999999999999999965321111000 000000000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH------HHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI------KEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~------~evl~~ 1007 (1029)
.....+..++..+.+++.+||+.||++||++ .|++++
T Consensus 234 ---~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 234 ---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 0011123456778999999999999999995 677653
No 130
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=345.41 Aligned_cols=254 Identities=26% Similarity=0.411 Sum_probs=197.7
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
.++|++.+.||+|+||+||+|+.. ++.||||.+... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 356888899999999999999874 789999998643 345778999999999999999999999874 378999999
Q ss_pred CCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc-EEEEccCCceecCCCCC
Q 036879 817 PNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV-ACLSDFGISKLLGDETS 893 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~-~kl~Dfg~a~~~~~~~~ 893 (1029)
++|+|.+++..... .+++..+..++.|+++|++|||+.+.+||+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999975543 4788999999999999999999654489999999999999998886 799999999765432
Q ss_pred ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
.....||+.|+|||++ ++.++|||||||++|||++|+.||............. ...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-----------~~~------- 219 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA-----------VHN------- 219 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH-----------HHT-------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH-----------Hhc-------
Confidence 1234589999999984 5778999999999999999999997532111100000 000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
......+..++..+.+++.+||+.||++|||++|+++.|+.+.+.+..
T Consensus 220 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 220 GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 000111123466789999999999999999999999999999877653
No 131
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=359.15 Aligned_cols=257 Identities=27% Similarity=0.454 Sum_probs=196.0
Q ss_pred CCCCCceeccCcceEEEEEEec--CC--cEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEec-CCeEEEE
Q 036879 739 GFSENNLLGKGSFGSVYKGTLS--DG--MQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSS-DHFKALV 812 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~--~~--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 812 (1029)
.|+..+.||+|+||+||+|++. ++ ..||||.++... ....+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3666789999999999999864 22 468999987543 3456789999999999999999999998754 5678999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++......+++..+..++.|+++||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877778999999999999999999999 6789999999999999999999999999998654322
Q ss_pred Cc---eeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 893 SM---TQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 893 ~~---~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
.. ......+|+.|+|||. .++.++|||||||++|||++ |.+||......+. ...+. ..
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~~-----------~~- 312 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLL-----------QG- 312 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHHH-----------TT-
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHHH-----------cC-
Confidence 11 1233457889999998 36789999999999999999 6777765321111 10000 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccc
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTN 1018 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~ 1018 (1029)
.....+..++..+.+++.+||+.||++|||++|+++.|+++...+...
T Consensus 313 ------~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 313 ------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred ------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 001112345677999999999999999999999999999999877543
No 132
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.6e-38 Score=346.29 Aligned_cols=257 Identities=26% Similarity=0.438 Sum_probs=193.6
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||+||+|+.. ..||+|+++... ....+.+.+|++++++++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 4678999999999999999999864 359999987553 33457799999999999999999999965 455678999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC-
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET- 892 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 892 (1029)
||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999777788999999999999999999999 6789999999999999999999999999997654321
Q ss_pred CceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
........||+.|+|||++ ++.++||||+||++|||++|+.||......+. .. ..+....
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~------------~~~~~~~ 242 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-II------------EMVGRGS 242 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HH------------HHHHHTS
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HH------------HHhcccc
Confidence 2222335689999999974 35589999999999999999999975321111 00 0000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
... ........++..+.+++.+||+.+|++|||+.|+++.|+++.+
T Consensus 243 ~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 243 LSP--DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCC--CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCc--chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 000 0001112456789999999999999999999999999998754
No 133
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-38 Score=355.39 Aligned_cols=260 Identities=22% Similarity=0.356 Sum_probs=205.1
Q ss_pred HHhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEecC
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSSD 806 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 806 (1029)
...++|++.+.||+|+||.||+|+. .++..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457899999999999999999986 246689999997543 33457899999999999 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 036879 807 HFKALVLEYMPNGSLENWMYNKNR----------------------SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDL 864 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dl 864 (1029)
+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 999999999999999999976543 3789999999999999999999 678999999
Q ss_pred CCCCEEECCCCcEEEEccCCceecCCCCCc-eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcc
Q 036879 865 NPSNILLNESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDEL 938 (1029)
Q Consensus 865 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~ 938 (1029)
||+||+++.++.+||+|||++......... ......+|+.|+|||.+ ++.++|||||||++|||++ |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866433222 23345578899999973 6788999999999999998 99999763
Q ss_pred cccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 939 FVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
..... +. ..+.... ....+..++..+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 279 ~~~~~-~~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 279 PVDAN-FY------------KLIQNGF------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCSHH-HH------------HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CcHHH-HH------------HHHhcCC------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 21111 00 0010000 011122346778999999999999999999999999998876654
No 134
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.6e-37 Score=342.47 Aligned_cols=267 Identities=19% Similarity=0.290 Sum_probs=206.0
Q ss_pred HHhCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEE-ecCCeEEEE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTC-SSDHFKALV 812 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV 812 (1029)
...++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++++.++|++++..++++ ...+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3467899999999999999999997 478999999876443 234688999999999988777666655 667888999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 889 (1029)
|||+ +++|.+++......+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 99999999877778999999999999999999999 7779999999999999 789999999999998765
Q ss_pred CCCC------ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhh
Q 036879 890 DETS------MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIIN 959 (1029)
Q Consensus 890 ~~~~------~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1029)
.... .......||+.|+|||.. ++.++|||||||++|||++|+.||......... .. +..
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~--------~~~ 229 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QK--------YER 229 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SH--------HHH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--hh--------hhh
Confidence 4322 122345689999999984 566899999999999999999999763222110 00 000
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccccc
Q 036879 960 VVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIE 1020 (1029)
Q Consensus 960 ~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~ 1020 (1029)
....... .........++..+.+++..||+.||++|||++++++.|+++..+...+.+
T Consensus 230 ~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 4hgt_A 230 ISEKKMS---TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp HHHHHHH---SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTT
T ss_pred hhccccc---chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcc
Confidence 0000000 000111123467899999999999999999999999999999988765554
No 135
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=343.12 Aligned_cols=246 Identities=24% Similarity=0.425 Sum_probs=186.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE---GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 457889999999999999999874 799999999975432 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++......+++..+..++.|+++|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999877778999999999999999999999 6789999999999999999999999999998765332
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
. ......|++.|+|||.. ++.++||||+|+++|||++|+.||......+. ....... +.
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~------~~----- 229 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLA------DY----- 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS------CC-----
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhc------cc-----
Confidence 2 12235689999999984 56799999999999999999999975321111 0000000 00
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..+..++..+.+++.+||+.||++|||+++++++
T Consensus 230 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0112245678999999999999999999999874
No 136
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.1e-36 Score=355.69 Aligned_cols=151 Identities=27% Similarity=0.445 Sum_probs=73.9
Q ss_pred cCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccc
Q 036879 424 IGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLR 503 (1029)
Q Consensus 424 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 503 (1029)
+..+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+
T Consensus 239 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~ 290 (466)
T 1o6v_A 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--------------------------LAGLTALT 290 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--------------------------GTTCTTCS
T ss_pred hhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--------------------------ccCCCccC
Confidence 4444555555555555553322 4445555555555555543322 34444444
Q ss_pred eeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccc
Q 036879 504 TLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 504 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 583 (1029)
.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|+
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 44444444444322 4444455555555555544333 44555555555555555432 244555555555555555
Q ss_pred ccccCCccccCCCCCCEEeCcCCcccC
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
+++..| +..+++|+.|++++|++++
T Consensus 365 l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 365 ISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCccch--hhcCCCCCEEeccCCcccC
Confidence 554444 4555555555555555553
No 137
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.5e-38 Score=343.70 Aligned_cols=256 Identities=24% Similarity=0.412 Sum_probs=207.0
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||.||+|+..++..||+|.+.... ...+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 356788999999999999999998888899999987553 235678999999999999999999999874 457899999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 99999999985432 26899999999999999999999 778999999999999999999999999999877554333
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......+++.|+|||.. ++.++||||||+++|||++ |+.||......+. .. .+....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~------------~~~~~~---- 227 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--IQ------------NLERGY---- 227 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HH------------HHHTTC----
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--HH------------HHhccc----
Confidence 33345578899999984 5778999999999999999 8999875321110 00 000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
....+..++..+.+++.+|++.||++|||++++++.|+++.....
T Consensus 228 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 228 --RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred --CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 001122346789999999999999999999999999999876543
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=351.57 Aligned_cols=280 Identities=26% Similarity=0.365 Sum_probs=197.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHH--HhcCCCCceEEEEEEEec-----CCe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEI--LGSIRHRNLVKIISTCSS-----DHF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~ 808 (1029)
..++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 356899999999999999999977 68999999987543 2334445555 445899999999986532 336
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CcEEcCCCCCCEEECCCCcEEE
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPT---------PIIHCDLNPSNILLNESMVACL 879 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~---------givH~Dlk~~Nill~~~~~~kl 879 (1029)
.++||||+++|+|.+++... ..++..+..++.|+++||+||| +. ||+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 68999999999999999654 3588999999999999999999 66 8999999999999999999999
Q ss_pred EccCCceecCCCC-------CceeccccCCccccCccCCCC-----------CCcchhHHHHHHHHHhcCCCCCCccccc
Q 036879 880 SDFGISKLLGDET-------SMTQTQTLATIGYMAPEWKLS-----------RKGDVYSYGIILMETFTKKKPTDELFVG 941 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-----------~~~DvwSlGvil~elltg~~p~~~~~~~ 941 (1029)
+|||+++.+.... ........||+.|+|||++.+ .++|||||||++|||++|+.||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 9999998764321 112223569999999998543 4789999999999999998876432211
Q ss_pred ccccchhchhcc-----chhhhhhhhhhh-hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 942 EISLKSRVNDSL-----HGKIINVVDINL-LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 942 ~~~~~~~~~~~~-----~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
.. +........ ...+...+.... .............++..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 242 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 242 PE-YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CC-CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hH-HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 11 110000000 000000000000 00000000111235678999999999999999999999999999999888
Q ss_pred cccccCCCCc
Q 036879 1016 LTNIENSSDK 1025 (1029)
Q Consensus 1016 ~~~~~~~~~~ 1025 (1029)
..+.+.+.+.
T Consensus 321 ~~~~~~~~~~ 330 (336)
T 3g2f_A 321 ERNKSVSPTA 330 (336)
T ss_dssp CC--------
T ss_pred HhcccCCCcc
Confidence 7766655443
No 139
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-37 Score=357.63 Aligned_cols=264 Identities=19% Similarity=0.268 Sum_probs=201.4
Q ss_pred HhCCCCCCceeccC--cceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKG--SFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G--~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++|||||++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35679999999999 99999999986 79999999998654 334567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 811 LVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
+||||+++|+|.+++... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999765 356999999999999999999999 6779999999999999999999999999886542
Q ss_pred CCC------CceeccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhh
Q 036879 890 DET------SMTQTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKI 957 (1029)
Q Consensus 890 ~~~------~~~~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 957 (1029)
... ........||+.|+|||++ ++.++||||+||++|||++|+.||.+....+... .... +..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~----~~~ 254 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLN----GTV 254 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC---------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhc----CCC
Confidence 211 1111224689999999973 5678999999999999999999997632221111 1000 000
Q ss_pred hhhhhhh------------------------------hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 958 INVVDIN------------------------------LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 958 ~~~~d~~------------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
....+.. ...........+..++..+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000 0000000112234467789999999999999999999999975
No 140
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.6e-38 Score=354.54 Aligned_cols=246 Identities=20% Similarity=0.266 Sum_probs=199.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+..|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999986 58899999998653 23456788999999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 98 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999998643 46899999999999999999999 77899999999999999999999999999986432
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
... ......||+.|+|||++ ++.++||||+||++|||++|+.||......+ .. .......
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----~~--------~~i~~~~-- 237 (353)
T 2i0e_A 174 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----LF--------QSIMEHN-- 237 (353)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHHCC--
T ss_pred CCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-----HH--------HHHHhCC--
Confidence 222 23345799999999984 6778999999999999999999997531110 00 0011000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCC-----HHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERIN-----IKEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~~ 1007 (1029)
...+..++.++.+++.+|+..||++||+ ++|++++
T Consensus 238 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 ------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0112235677899999999999999995 5777764
No 141
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.9e-38 Score=353.53 Aligned_cols=242 Identities=21% Similarity=0.258 Sum_probs=200.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 357899999999999999999976 79999999997653 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999654 46899999999999999999999 7789999999999999999999999999998764432
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
....||+.|+|||++ ++.++||||+||++|||++|+.||......+ .. .......
T Consensus 196 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~--------~~i~~~~---- 254 (350)
T 1rdq_E 196 ----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-----IY--------EKIVSGK---- 254 (350)
T ss_dssp ----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHHCC----
T ss_pred ----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-----HH--------HHHHcCC----
Confidence 235689999999984 6778999999999999999999997531110 00 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCC-----HHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERIN-----IKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~evl~~ 1007 (1029)
...+..++..+.+++.+||+.||++||+ ++|++++
T Consensus 255 ----~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 ----VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ----CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1112235677899999999999999998 8888864
No 142
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.7e-38 Score=351.38 Aligned_cols=245 Identities=25% Similarity=0.325 Sum_probs=190.1
Q ss_pred hCCCCCCceeccCcceEEEEEEe----cCCcEEEEEEeeccc----chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL----SDGMQIAVKVFNLEL----EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46789999999999999999987 478999999997642 2234567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||+++++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999999999864 346889999999999999999999 678999999999999999999999999999764
Q ss_pred CCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
..... ......||+.|+|||++ ++.++||||+||++|||++|+.||......+. +.......
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------------~~~i~~~~ 237 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-------------IDKILKCK 237 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------------HHHHHHTC
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-------------HHHHHhCC
Confidence 33222 22335689999999984 67789999999999999999999975321100 00011000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHH
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTK 1007 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1007 (1029)
...+..++..+.+++.+||+.||++|| ++.|++++
T Consensus 238 --------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 --------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011223467789999999999999999 78888874
No 143
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-37 Score=345.89 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=198.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc---hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE---GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999976 789999999976532 234678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998643 56899999999999999999999 677999999999999999999999999999876543
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.........|++.|+|||.+ ++.++||||||+++|||++|+.||...... ... ..+....
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~------------~~~~~~~-- 251 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMG------------AHINQAI-- 251 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHH------------HHHHSCC--
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHH------------HHhccCC--
Confidence 33333345689999999985 577999999999999999999999753211 000 0000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCC-CHHHHHHHHHHhHHhhc
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-NIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L~~i~~~~~ 1016 (1029)
......+..++..+.+++.+||+.||++|| +++++++.|+++.+...
T Consensus 252 --~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 252 --PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --CCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --CCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 000111234567789999999999999999 99999999988765553
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.2e-38 Score=350.60 Aligned_cols=258 Identities=23% Similarity=0.439 Sum_probs=207.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEec--------CCcEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS--------DGMQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSS 805 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 805 (1029)
..++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3567899999999999999999863 46789999997653 33456789999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEE
Q 036879 806 DHFKALVLEYMPNGSLENWMYNKNR---------------SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNIL 870 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nil 870 (1029)
.+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence 9999999999999999999976432 4889999999999999999999 678999999999999
Q ss_pred ECCCCcEEEEccCCceecCCCCCce-eccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccc
Q 036879 871 LNESMVACLSDFGISKLLGDETSMT-QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEIS 944 (1029)
Q Consensus 871 l~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 944 (1029)
++.++.+||+|||+++......... .....+++.|+|||++ ++.++|||||||++|||++ |+.||......+.
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 268 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 268 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-
Confidence 9999999999999998765433222 2234578899999974 6778999999999999999 9999865321110
Q ss_pred cchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 945 LKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
. ..+.... ....+..++..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 269 -~------------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 269 -F------------KLLKEGH------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp -H------------HHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -H------------HHHhcCC------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 0 0000000 011122356778999999999999999999999999999986543
No 145
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-38 Score=354.84 Aligned_cols=255 Identities=24% Similarity=0.429 Sum_probs=201.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcE----EEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQ----IAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
.++|++.+.||+|+||+||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 457888999999999999999865 4554 7778775432 333456788999999999999999999986 45678
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999877678999999999999999999999 67799999999999999999999999999987654
Q ss_pred CCC-ceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 891 ETS-MTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 891 ~~~-~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
... .......+++.|+|||+ .++.++|||||||++|||++ |+.||......+. .. .+...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~------------~~~~~ 233 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--PD------------LLEKG 233 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--HH------------HHHTT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--HH------------HHHcC
Confidence 322 22334567889999998 36789999999999999999 9999976321111 00 00000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
.....+..++..+.+++.+||+.||++|||++|++++|+.+.+..
T Consensus 234 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 234 ------ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ------CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ------CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 001111224556889999999999999999999999999887543
No 146
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=349.96 Aligned_cols=259 Identities=23% Similarity=0.282 Sum_probs=205.3
Q ss_pred HhCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEe----cCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCS----SDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~ 810 (1029)
..++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+++++.++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 356799999999999999999997 479999999997766666788999999999999999999999986 345778
Q ss_pred EEEeccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 811 LVLEYMPNGSLENWMYN---KNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
+||||+++|+|.+++.. ....+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999865 4567999999999999999999999 67899999999999999999999999999876
Q ss_pred cCCCCCc--------eeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc
Q 036879 888 LGDETSM--------TQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 888 ~~~~~~~--------~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
....... ......||+.|+|||++ ++.++|||||||++|||++|+.||................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~- 262 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN- 262 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-
Confidence 5321110 01123579999999985 4678999999999999999999996532211111110000
Q ss_pred cchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 953 LHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 953 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
.. ....+..++..+.+++.+||+.||++|||++|++++|+.+....
T Consensus 263 -----------~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 263 -----------QL------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -----------C--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred -----------cC------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00 00111234667999999999999999999999999998876543
No 147
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=352.75 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=185.2
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3567899999999999999999986 68899999997543 34568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCceecCCC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a~~~~~~ 891 (1029)
|+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999999854 456899999999999999999999 678999999999999975 899999999999865432
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. ......||+.|+|||++ ++.++|||||||++|||++|+.||.........+.. .......
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~------------i~~~~~~- 269 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR------------ILNCEYY- 269 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH------------HHTTCCC-
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH------------HHhCCCc-
Confidence 2 22335689999999984 677999999999999999999999653221111110 0000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........++..+.+++.+|++.||++|||+.|++++
T Consensus 270 ---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 ---FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ---CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000112346678999999999999999999999874
No 148
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-38 Score=364.50 Aligned_cols=244 Identities=25% Similarity=0.392 Sum_probs=201.8
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467889999999999999999976 79999999997653 22356789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++|+|.+++.. ...+++..+..++.||+.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999854 456999999999999999999999 7889999999999999999999999999998765432
Q ss_pred CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. .....||+.|+|||++ .+.++||||+||++|||++|+.||.+.... ... ....+..
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~--------~~i~~~~--- 232 (476)
T 2y94_A 171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLF--------KKICDGI--- 232 (476)
T ss_dssp C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHH--------HHHHTTC---
T ss_pred c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHH--------HHHhcCC---
Confidence 2 2335699999999984 256899999999999999999999753211 000 0011000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++..+.+++.+||..||++|||++|++++
T Consensus 233 -----~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 -----FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 01112345678999999999999999999999985
No 149
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6e-38 Score=341.91 Aligned_cols=243 Identities=24% Similarity=0.387 Sum_probs=180.2
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 367999999999999999999865 78999999987643 23356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+ ++++.+++.. ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 7788888754 456999999999999999999999 7779999999999999999999999999998664432
Q ss_pred CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. .....||+.|+|||.+ .+.++||||+||++|||++|+.||........ .. .... .
T Consensus 167 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~--------~~~~-~--- 227 (275)
T 2eue_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-----FK--------NISN-G--- 227 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HH--------HHHH-T---
T ss_pred c--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-----HH--------HHHh-C---
Confidence 2 2234689999999984 36789999999999999999999975311100 00 0000 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
....+..++..+.+++.+|++.||++|||++|++++
T Consensus 228 ----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 228 ----VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 011122356778999999999999999999999874
No 150
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=377.37 Aligned_cols=260 Identities=23% Similarity=0.421 Sum_probs=205.9
Q ss_pred CCCCc-eeccCcceEEEEEEec---CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 740 FSENN-LLGKGSFGSVYKGTLS---DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 740 ~~~~~-~lg~G~fg~V~~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
+.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33334 7999999999999764 46779999998653 3356789999999999999999999999976 56899999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++|+|.+++......+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+........
T Consensus 416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 99999999999877778999999999999999999999 678999999999999999999999999999876433221
Q ss_pred --eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 895 --TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 895 --~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
......+++.|+|||++ ++.++|||||||++|||++ |+.||......+ .. ..+..
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~------------~~i~~---- 554 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM------------AFIEQ---- 554 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HH------------HHHHT----
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HH------------HHHHc----
Confidence 11223456899999983 6789999999999999998 999997632111 00 00100
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccccCCC
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIENSS 1023 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~~~~ 1023 (1029)
......+..++..+.++|..||+.||++||++.++++.|+.+........+..+
T Consensus 555 --~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s 608 (613)
T 2ozo_A 555 --GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGS 608 (613)
T ss_dssp --TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSS
T ss_pred --CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCcc
Confidence 001122335678899999999999999999999999999999988766655443
No 151
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.9e-37 Score=340.42 Aligned_cols=267 Identities=19% Similarity=0.283 Sum_probs=209.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEE-ecCCeEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTC-SSDHFKALVL 813 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 813 (1029)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 357899999999999999999997 489999999987543 235688999999999988866666555 6677889999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 890 (1029)
||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 99999999877778999999999999999999999 6789999999999999 4889999999999987654
Q ss_pred CCCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 891 ETSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 891 ~~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
.... ......||+.|+|||.+ ++.++|||||||++|||++|+.||......... .. +...
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~--------~~~~ 230 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QK--------YERI 230 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SH--------HHHH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh--hh--------hhhh
Confidence 3221 12345689999999984 566899999999999999999999763221110 00 0000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccccC
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIEN 1021 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~~ 1021 (1029)
...... .........++..+.+++.+||+.||++|||++++++.|+++........+.
T Consensus 231 ~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~ 288 (296)
T 3uzp_A 231 SEKKMS---TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 288 (296)
T ss_dssp HHHHHH---SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSC
T ss_pred cccccC---CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccc
Confidence 100000 0001112345678999999999999999999999999999999887665443
No 152
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.8e-38 Score=341.36 Aligned_cols=245 Identities=25% Similarity=0.379 Sum_probs=197.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3567899999999999999999876 67899999987543 2234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999998643 56899999999999999999999 788999999999999999999999999998654332
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
. .....|++.|+|||.+ ++.++||||+|+++|||++|+.||......+. . .....
T Consensus 163 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~--------~~~~~----- 221 (279)
T 3fdn_A 163 R---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-----Y--------KRISR----- 221 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----H--------HHHHH-----
T ss_pred c---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-----H--------HHHHh-----
Confidence 2 2335689999999983 57789999999999999999999975311100 0 00000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.....+..++..+.+++.+||+.||++|||++|++++-
T Consensus 222 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 222 ---VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ---TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ---CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00111223466789999999999999999999999864
No 153
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.2e-38 Score=353.40 Aligned_cols=255 Identities=22% Similarity=0.274 Sum_probs=197.7
Q ss_pred HHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-----chhhHHHHHHHHHHhcCCCCceEEEEEEEecC
Q 036879 733 LFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-----EGTLRSFDAECEILGSIRHRNLVKIISTCSSD 806 (1029)
Q Consensus 733 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 806 (1029)
+....++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3455778999999999999999999875 78899999987542 34457899999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 036879 807 HFKALVLEYMPNGSLENWMYNK---------------------------------------NRSFDILQRLNMVIDVASA 847 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~ 847 (1029)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988421 1123567788899999999
Q ss_pred HHHHHhcCCCCcEEcCCCCCCEEECCCC--cEEEEccCCceecCCC---CCceeccccCCccccCccCC------CCCCc
Q 036879 848 LEYLHYDHPTPIIHCDLNPSNILLNESM--VACLSDFGISKLLGDE---TSMTQTQTLATIGYMAPEWK------LSRKG 916 (1029)
Q Consensus 848 l~~Lh~~~~~givH~Dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~---~~~~~~~~~gt~~y~aPE~~------~~~~~ 916 (1029)
|+||| ++||+||||||+||+++.++ .+||+|||+++.+... .........||+.|+|||++ ++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 67899999999999998776 8999999999865331 12223445799999999973 46789
Q ss_pred chhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHccccccc
Q 036879 917 DVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAE 996 (1029)
Q Consensus 917 DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 996 (1029)
|||||||++|||++|+.||......+. .......... ...+....++..+.+++.+||+.||+
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~-------------~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADT-------------ISQVLNKKLC----FENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCC----TTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHH-------------HHHHHhcccc----cCCcccccCCHHHHHHHHHHcCCChh
Confidence 999999999999999999975321111 0011111000 00111123467789999999999999
Q ss_pred CCCCHHHHHHH
Q 036879 997 ERINIKEALTK 1007 (1029)
Q Consensus 997 ~Rpt~~evl~~ 1007 (1029)
+|||+.|++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999984
No 154
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=348.75 Aligned_cols=257 Identities=29% Similarity=0.496 Sum_probs=201.0
Q ss_pred hCCCCCCceeccCcceEEEEEEecC-----CcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSD-----GMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
..+|+..+.||+|+||.||+|+... +..||||+++... ......+.+|+++++.++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999998642 2469999997653 334567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999877788999999999999999999999 67899999999999999999999999999987644
Q ss_pred CCC--ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhh
Q 036879 891 ETS--MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDI 963 (1029)
Q Consensus 891 ~~~--~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 963 (1029)
... .......+|+.|+|||++ ++.++|||||||++|||++ |+.||......+. . ....+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~-----------~~~~~~ 266 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--M-----------KAINDG 266 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--H-----------HHHHTT
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH--H-----------HHHHCC
Confidence 321 112223467889999984 5678999999999999999 9999965321110 0 000000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 964 NLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
. ....+..++..+.+++.+||+.+|++||++.|+++.|+++.+...
T Consensus 267 ~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 267 F-------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp C-------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred C-------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0 011122356778999999999999999999999999999886544
No 155
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=349.92 Aligned_cols=268 Identities=26% Similarity=0.446 Sum_probs=211.5
Q ss_pred hCCCCCCceeccCcceEEEEEEe-----cCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC--eE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-----SDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH--FK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 809 (1029)
.++|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688899999999999999984 368999999998776666788999999999999999999999987644 67
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
++||||+++++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999999999887778999999999999999999999 6789999999999999999999999999998775
Q ss_pred CCCCce--eccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc-----hhhh
Q 036879 890 DETSMT--QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH-----GKII 958 (1029)
Q Consensus 890 ~~~~~~--~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~ 958 (1029)
...... .....++..|+|||.. ++.++|||||||++|||++|+.||...... +......... ..+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 443221 2234567789999984 567899999999999999999997642111 0000000000 0011
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 959 NVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 959 ~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
+.+.. ......+..++.++.+++.+||+.||++|||+.|+++.|+++.+.+.
T Consensus 274 ~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 274 ELLKN------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHT------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhc------CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11110 00111233467789999999999999999999999999999988763
No 156
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.3e-38 Score=354.19 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=198.1
Q ss_pred CCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
+.|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4488889999999999999986 479999999997543 233467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||+. |++.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9996 6888888766778999999999999999999999 677999999999999999999999999999865432
Q ss_pred ceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
....||+.|+|||++ ++.++|||||||++|||++|+.||........ +.........
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-------------~~~~~~~~~~ 271 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-------------LYHIAQNESP 271 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-------------HHHHHHSCCC
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-------------HHHHHhcCCC
Confidence 234689999999973 56789999999999999999999865321110 0000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
...+..++..+.+++.+||+.||++|||+++++++-
T Consensus 272 ------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 272 ------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 000123456789999999999999999999998754
No 157
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.1e-37 Score=345.62 Aligned_cols=248 Identities=22% Similarity=0.323 Sum_probs=201.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch------hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG------TLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456899999999999999999976 7899999999765321 356799999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC----cEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM----VACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~----~~kl~Dfg~a 885 (1029)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999854 456899999999999999999999 67899999999999999888 8999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
........ .....||+.|+|||+. ++.++||||+||++|||++|+.||......+. . ....
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~--------~~i~ 231 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-----L--------ANIT 231 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-----H--------HHHH
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-----H--------HHHH
Confidence 87654322 2335689999999983 57789999999999999999999965311100 0 0000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.. ...........++..+.+++.+|++.||++|||+.|++++
T Consensus 232 ~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 232 SV----SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp TT----CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hc----ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000011123346778999999999999999999999974
No 158
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=349.48 Aligned_cols=254 Identities=25% Similarity=0.455 Sum_probs=198.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcE----EEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQ----IAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467899999999999999999864 5554 4677665432 334678999999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+.+|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999888888999999999999999999999 67799999999999999999999999999987643
Q ss_pred CCC-ceeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 891 ETS-MTQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 891 ~~~-~~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
... .......+|+.|+|||. .++.++|||||||++|||++ |+.||......+. . ..+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~------------~~~~~~ 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--S------------SILEKG 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H------------HHHHTT
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--H------------HHHHcC
Confidence 322 22233456889999998 36789999999999999999 9999976322111 1 111000
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
. ....+..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 236 ~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 E------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp C------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred C------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0 0111233566789999999999999999999999999998753
No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.8e-38 Score=350.95 Aligned_cols=257 Identities=21% Similarity=0.374 Sum_probs=193.3
Q ss_pred hCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC----e
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH----F 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 808 (1029)
.++|++.+.||+|+||.||+|++ .+++.||||+++... ......+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999997 478999999997653 233457899999999999999999999987643 3
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 49999999999999998643 46899999999999999999999 677999999999999999999999999999866
Q ss_pred CCCCC--ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 889 GDETS--MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 889 ~~~~~--~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
..... .......||+.|+|||++ ++.++|||||||++|||++|+.||.......... ..
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-------------~~-- 231 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY-------------QH-- 231 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------------HH--
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-------------HH--
Confidence 43321 122235689999999984 5678999999999999999999997532111100 00
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHH-HHHHHhHHh
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEAL-TKLLKIRNT 1014 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl-~~L~~i~~~ 1014 (1029)
..............++.++.+++.+||+.||++||++.+++ +.+.++...
T Consensus 232 --~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 232 --VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp --HHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred --hcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00000011111223567899999999999999999655544 555555443
No 160
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1e-37 Score=344.41 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=201.9
Q ss_pred hCCCCCCceeccCcceEEEEEEecC----CcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEe-cCCeEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSD----GMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCS-SDHFKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~ 810 (1029)
..+|++.+.||+|+||.||+|+..+ ...||+|.+.... ....+.+.+|++++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3458888999999999999998642 2358999987543 344577999999999999999999999864 566789
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877778999999999999999999999 77899999999999999999999999999986643
Q ss_pred CCC---ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 891 ETS---MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 891 ~~~---~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
... .......+|+.|+|||.. ++.++||||+|+++|||++ |.+||......+. ..... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~--~~~~~-----------~ 247 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLL-----------Q 247 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH--HHHHH-----------T
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH--HHHHh-----------c
Confidence 321 122334578899999983 6778999999999999999 4555544211111 00000 0
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
. .....+..++..+.+++.+||+.||++|||++|+++.|+++.+.+.
T Consensus 248 ~-------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 248 G-------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp T-------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred C-------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 0001122346678999999999999999999999999999988764
No 161
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-37 Score=352.95 Aligned_cols=207 Identities=28% Similarity=0.342 Sum_probs=178.1
Q ss_pred ccccccCHHHHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-----CCce
Q 036879 723 VTWRRISYQELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-----HRNL 796 (1029)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni 796 (1029)
.+...+++.+.....++|++.+.||+|+||+||+|+.. +++.||||+++.. ....+.+..|+++++.++ ||||
T Consensus 20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 34445556666667889999999999999999999975 7899999998743 334466788999999996 9999
Q ss_pred EEEEEEEecCCeEEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC--
Q 036879 797 VKIISTCSSDHFKALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE-- 873 (1029)
Q Consensus 797 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~-- 873 (1029)
+++++++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPY 174 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTT
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccc
Confidence 99999999999999999999 999999997654 45899999999999999999999 778999999999999975
Q ss_pred -----------------------CCcEEEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHH
Q 036879 874 -----------------------SMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILM 926 (1029)
Q Consensus 874 -----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ 926 (1029)
++.+||+|||+|....... ....||+.|+|||++ ++.++||||+||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 8899999999998654322 235689999999984 678999999999999
Q ss_pred HHhcCCCCCCcc
Q 036879 927 ETFTKKKPTDEL 938 (1029)
Q Consensus 927 elltg~~p~~~~ 938 (1029)
||++|+.||...
T Consensus 251 ell~g~~pf~~~ 262 (360)
T 3llt_A 251 ELYTGSLLFRTH 262 (360)
T ss_dssp HHHHSSCSCCCS
T ss_pred HHHHCCCCCCCC
Confidence 999999999753
No 162
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.9e-37 Score=346.93 Aligned_cols=257 Identities=28% Similarity=0.472 Sum_probs=203.5
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEE--EEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQI--AVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~v--AvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 812 (1029)
++|++.+.||+|+||.||+|+.. ++..+ |+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999865 56654 999887543 33456789999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcE
Q 036879 813 LEYMPNGSLENWMYNKN---------------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVA 877 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~ 877 (1029)
|||+++++|.+++.... ..+++..+..++.|+++||+||| ++||+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997543 46899999999999999999999 7789999999999999999999
Q ss_pred EEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhc
Q 036879 878 CLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 878 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
||+|||+++..... .......+++.|+|||++ ++.++|||||||++|||++ |+.||......+. ..
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--~~----- 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--YE----- 252 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HH-----
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--HH-----
Confidence 99999999743221 122234578899999984 5789999999999999998 9999975321110 00
Q ss_pred cchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccc
Q 036879 953 LHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNI 1019 (1029)
Q Consensus 953 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~ 1019 (1029)
.+.... ....+..++..+.+++.+||+.||++|||++|++++|+.+.+......
T Consensus 253 -------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 253 -------KLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp -------HGGGTC------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred -------HhhcCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 000000 001122346778999999999999999999999999999988765443
No 163
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-37 Score=347.07 Aligned_cols=247 Identities=19% Similarity=0.255 Sum_probs=179.3
Q ss_pred CceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEecCCeEEEEEeccCCCC
Q 036879 743 NNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSSDHFKALVLEYMPNGS 820 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gs 820 (1029)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+++++.++ ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999976 7899999998754 3456788999999997 9999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC---cEEEEccCCceecCCCCCceec
Q 036879 821 LENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM---VACLSDFGISKLLGDETSMTQT 897 (1029)
Q Consensus 821 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 897 (1029)
|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+++....... ...
T Consensus 93 L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~ 167 (325)
T 3kn6_A 93 LFERIKK-KKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLK 167 (325)
T ss_dssp HHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-ccc
Confidence 9999965 457999999999999999999999 77899999999999997665 899999999987654322 223
Q ss_pred cccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhh
Q 036879 898 QTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYL 973 (1029)
Q Consensus 898 ~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 973 (1029)
...||+.|+|||++ ++.++||||+||++|||++|+.||......... . ...+..............
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~---------~~~~~~~~i~~~~~~~~~ 237 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-T---------SAVEIMKKIKKGDFSFEG 237 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-C---------CHHHHHHHHTTTCCCCCS
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-c---------cHHHHHHHHHcCCCCCCc
Confidence 45689999999984 567899999999999999999999763221100 0 000111111111111111
Q ss_pred HHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 974 TAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 974 ~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.....++.++.+++.+|++.||++|||++|++++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 2223467789999999999999999999999864
No 164
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-39 Score=354.89 Aligned_cols=272 Identities=22% Similarity=0.345 Sum_probs=186.5
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhc--CCCCceEEEEEEEecCC----eEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGS--IRHRNLVKIISTCSSDH----FKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 810 (1029)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 36799999999999999999987 4899999998644 33567788888887 79999999999998765 789
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCEEECCCCcEEEEccCCc
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYD-----HPTPIIHCDLNPSNILLNESMVACLSDFGIS 885 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a 885 (1029)
+||||+++|+|.+++.. ..+++..+..++.|++.|++|||.. +++||+||||||+||+++.++.+||+|||+|
T Consensus 78 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHH--CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999999999954 3577888999999999999999932 2567999999999999999999999999999
Q ss_pred eecCCCCCce---eccccCCccccCccCCCC----------CCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc
Q 036879 886 KLLGDETSMT---QTQTLATIGYMAPEWKLS----------RKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 886 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~----------~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
.......... .....||+.|+|||++.+ .++|||||||++|||++|+.|+.........+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664432221 223469999999998533 479999999999999999544432211111111110000
Q ss_pred c-chhhhh-hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 953 L-HGKIIN-VVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 953 ~-~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
. ...+.. ........... .......++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCC-GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHHHHHHHHhhcCCCcc-ccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 0 000111 11111110000 00111255778999999999999999999999999999887543
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=350.88 Aligned_cols=239 Identities=24% Similarity=0.328 Sum_probs=198.7
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--------hhhHHHHHHHHHHhcCCCCceEEEEEEEecC
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--------GTLRSFDAECEILGSIRHRNLVKIISTCSSD 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 806 (1029)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3567999999999999999999865 789999999986531 1344678899999999999999999999999
Q ss_pred CeEEEEEeccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCc
Q 036879 807 HFKALVLEYMPNG-SLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGIS 885 (1029)
Q Consensus 807 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a 885 (1029)
+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999998776 99998854 456999999999999999999999 778999999999999999999999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
........ .....||+.|+|||++ .+.++|||||||++|||++|+.||...... ..
T Consensus 178 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~---------- 238 (335)
T 3dls_A 178 AYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------VE---------- 238 (335)
T ss_dssp EECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------TT----------
T ss_pred eECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------Hh----------
Confidence 87754332 2235699999999984 266789999999999999999999652110 00
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
... ..+..++.++.+++.+||+.||++|||++|++++
T Consensus 239 --~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 --AAI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --hcc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0011235678999999999999999999999986
No 166
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2e-37 Score=344.12 Aligned_cols=263 Identities=21% Similarity=0.349 Sum_probs=197.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecc---cchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLE---LEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457899999999999999999874 7999999999753 233456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYN---KNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|||+++++|.+++.. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 3566899999999999999999999 6789999999999999999999999999998664
Q ss_pred CCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
.... ......+++.|+|||+. ++.++||||||+++|||++|+.||.........+...+. ....
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~~~ 255 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-----------QCDY 255 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-----------TTCS
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-----------cccC
Confidence 4322 22235689999999984 567899999999999999999998653211111100000 0000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccccc
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIE 1020 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~ 1020 (1029)
. ......++.++.+++.+||+.||++|||++++++.++++......+..
T Consensus 256 ~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 256 P------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp C------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred C------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 0 000123466789999999999999999999999999999988766543
No 167
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-37 Score=338.20 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=200.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999876 68999999997653 334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc---EEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV---ACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 890 (1029)
||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999888543 56899999999999999999999 677999999999999986655 99999999987654
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
... .....||+.|+|||++ ++.++||||+|+++|+|++|+.||........ .. .+....
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~------------~~~~~~- 223 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YA------------QIKAGA- 223 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HH------------HHHHTC-
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--HH------------HHHhcc-
Confidence 322 2335689999999984 57789999999999999999999965311100 00 000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
..........++..+.+++.+|++.||++|||++|++++-
T Consensus 224 --~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 224 --YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp --CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred --ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 0000011123466789999999999999999999999864
No 168
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.1e-37 Score=359.57 Aligned_cols=197 Identities=23% Similarity=0.340 Sum_probs=165.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecC-----C
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSD-----H 807 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 807 (1029)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3578999999999999999999875 68999999997543 33456789999999999999999999999765 5
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..|+||||++ ++|.+++.. ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 7899999995 699999854 456999999999999999999999 77899999999999999999999999999987
Q ss_pred cCCCCCc---------------------eeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCc
Q 036879 888 LGDETSM---------------------TQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDE 937 (1029)
Q Consensus 888 ~~~~~~~---------------------~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~ 937 (1029)
....... .....+||+.|+|||++ ++.++||||+||++|||++|..||..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 6433211 12456799999999973 67789999999999999997777654
No 169
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=350.05 Aligned_cols=264 Identities=22% Similarity=0.329 Sum_probs=195.2
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch-hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG-TLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
++|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999976 7899999998754322 223456799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCce
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMT 895 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 895 (1029)
++ |+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........ .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 96 6999999887788999999999999999999999 77899999999999999999999999999986543322 2
Q ss_pred eccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhc---hhccchhhhhhhhhhhhh
Q 036879 896 QTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRV---NDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 896 ~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~ 967 (1029)
.....||+.|+|||++ ++.++||||+||++|||++|+.||......+. ..... .......+..........
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHhchhhhcchhhc
Confidence 2335689999999973 46789999999999999999999976422111 00000 000000011111000000
Q ss_pred -------hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 -------KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 -------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...........++..+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000011122356778999999999999999999999984
No 170
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-37 Score=352.93 Aligned_cols=251 Identities=22% Similarity=0.262 Sum_probs=190.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
..++|++.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3578999999999999999999976 799999999975432 33668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc--EEEEccCCceecCCCC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV--ACLSDFGISKLLGDET 892 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~--~kl~Dfg~a~~~~~~~ 892 (1029)
|+++|+|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+......
T Consensus 97 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 97 YASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 9999999999854 346899999999999999999999 778999999999999987765 9999999997543222
Q ss_pred CceeccccCCccccCccCC----C-CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----L-SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
......||+.|+|||++ + +.++||||+||++|||++|+.||........ +..... ........
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~--------~~~~~~~~- 240 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQ--------RILSVKYS- 240 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHH--------HHHTTCCC-
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHH--------HHhcCCCC-
Confidence 22335699999999984 2 2348999999999999999999976322111 111110 01000000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.+....++..+.+++.+||+.||++|||+.|++++-
T Consensus 241 -----~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 241 -----IPDDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp -----CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred -----CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 000112356789999999999999999999999863
No 171
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=341.76 Aligned_cols=248 Identities=24% Similarity=0.359 Sum_probs=195.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 356889999999999999999875 78999999997654 3345789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceec
Q 036879 815 YMPNGSLENWMYNK---NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLL 888 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~ 888 (1029)
|+++|+|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 467999999999999999999999 7789999999999999 45688999999999866
Q ss_pred CCCCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
.... ......||+.|+|||++ ++.++||||+||++|||++|+.||......+. ..... ......
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~---------~~~~~~ 244 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKAT---------YKEPNY 244 (285)
T ss_dssp -----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH---------HCCCCC
T ss_pred CCcc--cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--Hhhhc---------cCCccc
Confidence 4432 22345689999999984 56789999999999999999999975321111 00000 000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ......+..+.+++.+||+.||++|||++|++++
T Consensus 245 ~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 245 A-------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp C-------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred c-------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0001135678899999999999999999999864
No 172
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=344.05 Aligned_cols=263 Identities=21% Similarity=0.273 Sum_probs=196.2
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
++|++.+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67899999999999999999976 699999999865532 235678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++++|.+++. ....+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 999999988774 4566999999999999999999999 77899999999999999999999999999987653322
Q ss_pred eeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc---hhhhhhhhh-h-
Q 036879 895 TQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH---GKIINVVDI-N- 964 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~-~- 964 (1029)
......||+.|+|||++ ++.++||||+||++|||++|+.||......+.. ..+..... ......... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL--YLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhcccccccccccccccc
Confidence 22345689999999973 577899999999999999999999764222110 00000000 000000000 0
Q ss_pred -----h--hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 965 -----L--LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 965 -----~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. .............++..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 000000000112356678999999999999999999999974
No 173
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4e-36 Score=353.22 Aligned_cols=348 Identities=27% Similarity=0.421 Sum_probs=263.4
Q ss_pred ccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcc
Q 036879 223 FECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANN 302 (1029)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 302 (1029)
..+++|+.|++++|.+.. +|. +..+++ |++|+|++|++++..| +.++++|++|++++|.
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~~-~~~l~~-----------------L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~ 101 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-IDG-VEYLNN-----------------LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQ 101 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CTT-GGGCTT-----------------CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred hHhccccEEecCCCCCcc-Ccc-hhhhcC-----------------CCEEECCCCccCCchh--hhccccCCEEECCCCc
Confidence 346677777777777653 342 444433 3466666666664433 6666777777777776
Q ss_pred cCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccc
Q 036879 303 LLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLR 382 (1029)
Q Consensus 303 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~ 382 (1029)
+.+ ++. + ..+++|++|+|++|++++..+ +.++++|++|++++|.+.+. + .+..+++|+
T Consensus 102 l~~-~~~-~-~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~----------------~~~~l~~L~ 159 (466)
T 1o6v_A 102 IAD-ITP-L-ANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S----------------ALSGLTSLQ 159 (466)
T ss_dssp CCC-CGG-G-TTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G----------------GGTTCTTCS
T ss_pred ccc-Chh-h-cCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h----------------hhccCCccc
Confidence 653 333 3 346677777777777665432 66677777777777766532 1 134567777
Q ss_pred eeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccc
Q 036879 383 KLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHN 462 (1029)
Q Consensus 383 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 462 (1029)
.|+++ |.+.+.. .+..+.. |+.|++++|.+++. ..+..+++|++|++++|.+++..| +..+++|++|++++|
T Consensus 160 ~L~l~-~~~~~~~--~~~~l~~-L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 231 (466)
T 1o6v_A 160 QLSFG-NQVTDLK--PLANLTT-LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGN 231 (466)
T ss_dssp EEEEE-ESCCCCG--GGTTCTT-CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred EeecC-CcccCch--hhccCCC-CCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCC
Confidence 77775 4444332 2666655 77888888877743 347788899999999999886555 777889999999999
Q ss_pred cccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCc
Q 036879 463 KLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPV 542 (1029)
Q Consensus 463 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 542 (1029)
++++. ..+..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+
T Consensus 232 ~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~- 304 (466)
T 1o6v_A 232 QLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP- 304 (466)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG-
T ss_pred Ccccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh-
Confidence 88764 467888999999999999987665 8899999999999999997655 8899999999999999997544
Q ss_pred cccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhccccc
Q 036879 543 EIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLL 622 (1029)
Q Consensus 543 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 622 (1029)
++.+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|
T Consensus 305 -~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 377 (466)
T 1o6v_A 305 -ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRI 377 (466)
T ss_dssp -GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTC
T ss_pred -hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCC
Confidence 8899999999999999997665 78899999999999999965 468899999999999999998877 8899999
Q ss_pred ceeeccCCCCcCC
Q 036879 623 KFLNLSFNGLQGQ 635 (1029)
Q Consensus 623 ~~L~l~~N~l~~~ 635 (1029)
+.|++++|++++.
T Consensus 378 ~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 378 TQLGLNDQAWTNA 390 (466)
T ss_dssp CEEECCCEEEECC
T ss_pred CEEeccCCcccCC
Confidence 9999999999974
No 174
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.8e-38 Score=348.49 Aligned_cols=265 Identities=22% Similarity=0.366 Sum_probs=210.3
Q ss_pred CHHHHHHHhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeecccc-hhhHHHHHHHHHHhcC-CCCceEEEE
Q 036879 729 SYQELFRATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLELE-GTLRSFDAECEILGSI-RHRNLVKII 800 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~ 800 (1029)
....+....++|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444555678899999999999999999974 2568899999976543 3456789999999999 799999999
Q ss_pred EEEecCC-eEEEEEeccCCCCHHHHHhcCCCC---------------CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCC
Q 036879 801 STCSSDH-FKALVLEYMPNGSLENWMYNKNRS---------------FDILQRLNMVIDVASALEYLHYDHPTPIIHCDL 864 (1029)
Q Consensus 801 ~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dl 864 (1029)
+++...+ ..++||||+++++|.+++...... +++..+..++.|++.|++||| +.||+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987654 589999999999999999765432 789999999999999999999 678999999
Q ss_pred CCCCEEECCCCcEEEEccCCceecCCCCC-ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcc
Q 036879 865 NPSNILLNESMVACLSDFGISKLLGDETS-MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDEL 938 (1029)
Q Consensus 865 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~ 938 (1029)
||+||+++.++.+||+|||+++....... .......+|+.|+|||++ ++.++||||+||++|||++ |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987644322 223345678899999973 6779999999999999998 99998653
Q ss_pred cccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 939 FVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
..... +.. .+.... ....+..++..+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 255 ~~~~~-~~~------------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDEE-FCR------------RLKEGT------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSHH-HHH------------HHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhHH-HHH------------HhccCc------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 21111 000 000000 00111234667899999999999999999999999999987654
No 175
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.3e-38 Score=351.74 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=196.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+|++++.++ +||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467999999999999999999976 789999999976532 345688888887 79999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC----CcEEEEccCCceecCC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES----MVACLSDFGISKLLGD 890 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~----~~~kl~Dfg~a~~~~~ 890 (1029)
|+++|+|.+++.. .+.+++..+..++.||+.||+||| +.||+||||||+||++... +.+||+|||+++....
T Consensus 97 ~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999999999854 456999999999999999999999 7789999999999998533 3599999999987654
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
... ......||+.|+|||++ ++.++||||+||++|||++|+.||...... ......... .....
T Consensus 173 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~i--------~~~~~- 240 (342)
T 2qr7_A 173 ENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARI--------GSGKF- 240 (342)
T ss_dssp TTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHHH--------HHCCC-
T ss_pred CCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHHH--------ccCCc-
Confidence 322 22335689999999984 677999999999999999999999752111 000000000 00000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLL 1009 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1009 (1029)
......+..++.++.+++.+|+..||++|||+.|++++-.
T Consensus 241 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 241 ---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp ---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 0000011234677899999999999999999999998543
No 176
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=351.40 Aligned_cols=248 Identities=25% Similarity=0.377 Sum_probs=194.7
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCC--CceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRH--RNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46789999999999999999998889999999987553 3345778999999999976 9999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
||+ .+++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++ ++.+||+|||+++......
T Consensus 88 ~e~-~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 58899999965 456899999999999999999999 67799999999999997 6789999999998765432
Q ss_pred Cc-eeccccCCccccCccCC---------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchh
Q 036879 893 SM-TQTQTLATIGYMAPEWK---------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGK 956 (1029)
Q Consensus 893 ~~-~~~~~~gt~~y~aPE~~---------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 956 (1029)
.. ......||+.|+|||++ ++.++|||||||++|||++|+.||.........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------------ 229 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------ 229 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH------------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH------------
Confidence 21 22345799999999974 355799999999999999999999753211110
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 957 IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 957 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
+...++.... ...+...+..+.+++..||+.||++|||+.|++++-
T Consensus 230 ~~~~~~~~~~------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 230 LHAIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HHHHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHhcCCcc------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1111111100 011112345688999999999999999999999764
No 177
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4e-38 Score=351.84 Aligned_cols=266 Identities=21% Similarity=0.377 Sum_probs=210.5
Q ss_pred HHHHHhCCCCCCceeccCcceEEEEEEec------CCcEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCceEEEEEEEe
Q 036879 732 ELFRATDGFSENNLLGKGSFGSVYKGTLS------DGMQIAVKVFNLELE-GTLRSFDAECEILGSIRHRNLVKIISTCS 804 (1029)
Q Consensus 732 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 804 (1029)
++....++|++.+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|+++++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678999999999999999999764 367899999975532 34457899999999999999999999999
Q ss_pred cCCeEEEEEeccCCCCHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC
Q 036879 805 SDHFKALVLEYMPNGSLENWMYNKN---------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM 875 (1029)
Q Consensus 805 ~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~ 875 (1029)
+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCC
Confidence 9999999999999999999986532 45789999999999999999999 67899999999999999999
Q ss_pred cEEEEccCCceecCCCCCc-eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhc
Q 036879 876 VACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRV 949 (1029)
Q Consensus 876 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 949 (1029)
.+||+|||+++........ ......+|+.|+|||++ ++.++||||+||++|||++ |+.||......+. ..
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~-- 251 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV--LR-- 251 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--HH--
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--HH--
Confidence 9999999999865432221 12234568899999983 6778999999999999999 8899865321110 00
Q ss_pred hhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccccc
Q 036879 950 NDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNIE 1020 (1029)
Q Consensus 950 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~~ 1020 (1029)
....... ...+..++..+.+++.+||+.||++|||+.|++++|+++......+.+
T Consensus 252 ---------~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~ 306 (322)
T 1p4o_A 252 ---------FVMEGGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306 (322)
T ss_dssp ---------HHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHC
T ss_pred ---------HHHcCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccc
Confidence 0000000 011224567789999999999999999999999999987665544433
No 178
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-37 Score=363.17 Aligned_cols=190 Identities=23% Similarity=0.344 Sum_probs=151.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEec-----CCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSS-----DHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 808 (1029)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|+++++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999876 78999999987543 3345678999999999999999999999843 357
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.|+||||+ +++|.+++. ....+++..+..++.||+.||+||| +.|||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 579999885 4466999999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCC--------------------------ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcC
Q 036879 889 GDETS--------------------------MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTK 931 (1029)
Q Consensus 889 ~~~~~--------------------------~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg 931 (1029)
..... ......+||+.|+|||++ ++.++||||+||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 42211 112345789999999963 67789999999999999994
No 179
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.1e-38 Score=351.55 Aligned_cols=260 Identities=23% Similarity=0.380 Sum_probs=207.4
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CC-----cEEEEEEeeccc-chhhHHHHHHHHHHhcC-CCCceEEEEEEEec
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DG-----MQIAVKVFNLEL-EGTLRSFDAECEILGSI-RHRNLVKIISTCSS 805 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 805 (1029)
....++|++.+.||+|+||.||+|... ++ ..||+|.+.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 345678999999999999999999864 23 479999997654 23456789999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC
Q 036879 806 DHFKALVLEYMPNGSLENWMYNK-------------NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN 872 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~ 872 (1029)
.+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 99999999999999999998653 345799999999999999999999 67899999999999999
Q ss_pred CCCcEEEEccCCceecCCCCCc-eeccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccc
Q 036879 873 ESMVACLSDFGISKLLGDETSM-TQTQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLK 946 (1029)
Q Consensus 873 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 946 (1029)
.++.+||+|||++......... ......+|+.|+|||. .++.++|||||||++|||++ |..||........ +
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~- 276 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-F- 276 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-H-
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-H-
Confidence 9999999999999865433222 2233457889999997 36789999999999999998 9999875321111 0
Q ss_pred hhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 947 SRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 947 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
...+.... ....+..++..+.+++..||+.||++|||+.|+++.|+++....
T Consensus 277 -----------~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 277 -----------YKLVKDGY------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp -----------HHHHHHTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------HHHHhcCC------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 00110000 00111234567899999999999999999999999999887653
No 180
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-37 Score=355.29 Aligned_cols=246 Identities=25% Similarity=0.391 Sum_probs=194.6
Q ss_pred CCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCC--CCceEEEEEEEecCCeEEEEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIR--HRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 813 (1029)
++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999997553 334577999999999996 599999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
| +.+++|.+++... ..+++..+..++.||+.||+||| +.||+||||||+||+++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 5688999999654 47889999999999999999999 78899999999999995 58999999999987654322
Q ss_pred -ceeccccCCccccCccCC---------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhh
Q 036879 894 -MTQTQTLATIGYMAPEWK---------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKI 957 (1029)
Q Consensus 894 -~~~~~~~gt~~y~aPE~~---------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 957 (1029)
.......||+.|+|||++ ++.++|||||||++|||++|+.||........ .+
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~------------~~ 277 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS------------KL 277 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------------HH
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH------------HH
Confidence 123345799999999974 45689999999999999999999965321100 01
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 958 INVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 958 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...++.... ...+...+..+.+++.+||+.||++|||+.|++++
T Consensus 278 ~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 HAIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhCcccc------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111111110 00111224568999999999999999999999975
No 181
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.6e-37 Score=343.73 Aligned_cols=259 Identities=23% Similarity=0.425 Sum_probs=196.3
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC-
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH- 807 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 807 (1029)
...++|.+.+.||+|+||.||+|+.. ++..||+|+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 35677899999999999999999764 34589999987553 334567899999999999999999999997754
Q ss_pred ----eEEEEEeccCCCCHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEE
Q 036879 808 ----FKALVLEYMPNGSLENWMYN-----KNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVAC 878 (1029)
Q Consensus 808 ----~~~lV~E~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~k 878 (1029)
..++||||+++++|.+++.. ....+++..++.++.|+++||+||| +.||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 34899999999999999853 3456999999999999999999999 78899999999999999999999
Q ss_pred EEccCCceecCCCCC-ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhc
Q 036879 879 LSDFGISKLLGDETS-MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 879 l~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
|+|||++........ .......+++.|+|||.. ++.++|||||||++|||++ |+.||........ ..
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~----- 260 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YD----- 260 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HH-----
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HH-----
Confidence 999999986644322 122334578899999984 5778999999999999999 8889865321111 00
Q ss_pred cchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 953 LHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 953 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
...... ....+..++..+.+++.+||+.||++|||+.+++++|+++.+.+.
T Consensus 261 ------~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 261 ------YLLHGH-------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ------HHHTTC-------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ------HHHcCC-------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 000000 011123456779999999999999999999999999999987653
No 182
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.1e-38 Score=366.79 Aligned_cols=245 Identities=22% Similarity=0.307 Sum_probs=191.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 79999999997642 33446678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHP-TPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| + +||+||||||+||+++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999999999854 456899999999999999999999 5 67999999999999999999999999999864332
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.. ......||+.|+|||++ ++.++|||||||++|||++|+.||........ .. .... .
T Consensus 303 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~--------~i~~----~ 364 (446)
T 4ejn_A 303 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-----FE--------LILM----E 364 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HH--------HHHH----C
T ss_pred Cc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-----HH--------HHHh----C
Confidence 22 23346799999999984 68899999999999999999999965311100 00 0000 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1007 (1029)
. ...+..++..+.+++.+||+.||++|| +++|++++
T Consensus 365 ~----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 365 E----IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp C----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C----CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 0 011223467789999999999999999 99999874
No 183
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=342.76 Aligned_cols=265 Identities=22% Similarity=0.303 Sum_probs=196.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc-----hhhHHHHHHHHHHhcCC---CCceEEEEEEEecC
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-----GTLRSFDAECEILGSIR---HRNLVKIISTCSSD 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 806 (1029)
..++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999974 789999999875431 12346777888877764 99999999999775
Q ss_pred C-----eEEEEEeccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEE
Q 036879 807 H-----FKALVLEYMPNGSLENWMYNKNR-SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLS 880 (1029)
Q Consensus 807 ~-----~~~lV~E~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~ 880 (1029)
. ..++||||++ ++|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5789999996 699999876543 4999999999999999999999 6779999999999999999999999
Q ss_pred ccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh---cc
Q 036879 881 DFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND---SL 953 (1029)
Q Consensus 881 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~ 953 (1029)
|||+++...... ......||+.|+|||++ ++.++||||+||++|||++|+.||......+. +...... ..
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHHHHHCCCC
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCC
Confidence 999998664332 22345789999999983 68899999999999999999999975322111 0000000 00
Q ss_pred chhhhhhh---hhhhh-hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 954 HGKIINVV---DINLL-QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 954 ~~~~~~~~---d~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+.... ..... ............++..+.+++.+|++.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000000 00000 00001111122356788999999999999999999999875
No 184
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.6e-37 Score=348.61 Aligned_cols=251 Identities=23% Similarity=0.359 Sum_probs=202.6
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--------hhhHHHHHHHHHHhcC-CCCceEEEEEEE
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--------GTLRSFDAECEILGSI-RHRNLVKIISTC 803 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 803 (1029)
....++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+++++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 445577999999999999999999986 799999999875431 1245688999999999 899999999999
Q ss_pred ecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccC
Q 036879 804 SSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFG 883 (1029)
Q Consensus 804 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg 883 (1029)
......++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecC
Confidence 999999999999999999999864 356899999999999999999999 6789999999999999999999999999
Q ss_pred CceecCCCCCceeccccCCccccCccCC----------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc
Q 036879 884 ISKLLGDETSMTQTQTLATIGYMAPEWK----------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL 953 (1029)
Q Consensus 884 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 953 (1029)
++........ .....||+.|+|||++ ++.++|||||||++|||++|+.||...... ....
T Consensus 246 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~------ 315 (365)
T 2y7j_A 246 FSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLR------ 315 (365)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH------
T ss_pred cccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHH------
Confidence 9987754332 2345799999999973 567899999999999999999999652110 0000
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 954 HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 954 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.... .......+....++..+.+++.+|++.||++|||+.|++++
T Consensus 316 -----~i~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 316 -----MIME----GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -----HHHH----TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----HHHh----CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0000 00000011112346678999999999999999999999874
No 185
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=374.35 Aligned_cols=254 Identities=27% Similarity=0.456 Sum_probs=205.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456688889999999999999999888889999997653 234679999999999999999999999976 668999999
Q ss_pred cCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++........
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999653 356899999999999999999999 677999999999999999999999999999866432222
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
......++..|+|||++ ++.++|||||||++|||++ |+.||.+....+. .+.+...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~----- 480 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERG----- 480 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--------------HHHHHTT-----
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcC-----
Confidence 22234567899999973 6789999999999999999 9999875321110 0000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.....+..++..+.++|.+||+.||++|||++++++.|+.+...
T Consensus 481 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 481 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 00112234677899999999999999999999999999877543
No 186
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-37 Score=341.08 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=202.6
Q ss_pred CCCCCceeccCcceEEEEEEec-C---CcEEEEEEeecccc-hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE-EEE
Q 036879 739 GFSENNLLGKGSFGSVYKGTLS-D---GMQIAVKVFNLELE-GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK-ALV 812 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~-~---~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 812 (1029)
.|...+.||+|+||+||+|++. + +..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3556689999999999999853 2 33799999875433 3457889999999999999999999999876554 899
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+.+++|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999877788999999999999999999999 6789999999999999999999999999998654322
Q ss_pred ---CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 893 ---SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 893 ---~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
........+++.|+|||.. ++.++||||+||++|||++|+.|+...... ...... +....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~------------~~~~~ 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHF------------LAQGR 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHH------------HHTTC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHH------------hhcCC
Confidence 1122334678899999984 567899999999999999966664321111 101100 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
....+..++..+.+++.+||+.||++|||++|+++.|+++.+.+..
T Consensus 246 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 ------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred ------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 0111223466789999999999999999999999999999887753
No 187
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-37 Score=353.63 Aligned_cols=266 Identities=24% Similarity=0.308 Sum_probs=189.3
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCC-CCceEEEEEEEecCC--e
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIR-HRNLVKIISTCSSDH--F 808 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 808 (1029)
...++|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 35678999999999999999999875 79999999986542 344567889999999997 999999999997543 6
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.|+||||++ ++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999996 689998865 46889999999999999999999 778999999999999999999999999999865
Q ss_pred CCCC--------------------CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCccccccc
Q 036879 889 GDET--------------------SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEI 943 (1029)
Q Consensus 889 ~~~~--------------------~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~ 943 (1029)
.... ....+..+||+.|+|||++ ++.++||||+||++|||++|++||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 3211 1122335799999999973 56789999999999999999999976321111
Q ss_pred ccchhchhc---cchhh--------hhhhhhh----------hhhhhh------hhhHHHHHHHHHHHHHHHHccccccc
Q 036879 944 SLKSRVNDS---LHGKI--------INVVDIN----------LLQKED------AYLTAKEQCVSSVLSLAMQCTRESAE 996 (1029)
Q Consensus 944 ~~~~~~~~~---~~~~~--------~~~~d~~----------~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~ 996 (1029)
+....... ....+ ...+... ...... .....+..++..+.+++.+||..||+
T Consensus 240 -~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 -LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp -HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred -HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 10000000 00000 0000000 000000 00000113467899999999999999
Q ss_pred CCCCHHHHHHH
Q 036879 997 ERINIKEALTK 1007 (1029)
Q Consensus 997 ~Rpt~~evl~~ 1007 (1029)
+|||++|++++
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999986
No 188
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-37 Score=364.71 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=203.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3466889999999999999999876 79999999997642 2334668899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 812 VLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| ++|||||||||+||+++.++.+||+|||+|+....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999987654 35999999999999999999999 67899999999999999999999999999987754
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
... .....||+.|+|||++ ++.++||||+||++|||++|+.||........ . ..+...+...
T Consensus 339 ~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~---------~~i~~~i~~~-- 404 (576)
T 2acx_A 339 GQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-R---------EEVERLVKEV-- 404 (576)
T ss_dssp TCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-H---------HHHHHHHHHC--
T ss_pred Ccc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-H---------HHHHHHhhcc--
Confidence 332 2335799999999984 57789999999999999999999976321110 0 0000000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~ 1007 (1029)
....+..++..+.+++.+|+..||++|| +++|++++
T Consensus 405 -----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 -----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0011223467889999999999999999 78999874
No 189
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-36 Score=341.41 Aligned_cols=272 Identities=22% Similarity=0.367 Sum_probs=208.7
Q ss_pred CHHHHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhc--CCCCceEEEEEEEecC
Q 036879 729 SYQELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGS--IRHRNLVKIISTCSSD 806 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 806 (1029)
+........++|++.+.||+|+||.||+|+. +++.||||++... ..+.+.+|+++++. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333445677899999999999999999988 5899999998644 33567788988887 7999999999999877
Q ss_pred C----eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEcCCCCCCEEECCCCcE
Q 036879 807 H----FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYD-----HPTPIIHCDLNPSNILLNESMVA 877 (1029)
Q Consensus 807 ~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~givH~Dlk~~Nill~~~~~~ 877 (1029)
. ..++||||+++|+|.+++.. ..+++..+..++.|++.|++|||.. ++.+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 78999999999999999965 4689999999999999999999932 14579999999999999999999
Q ss_pred EEEccCCceecCCCCCc---eeccccCCccccCccCCCC----------CCcchhHHHHHHHHHhcC----------CCC
Q 036879 878 CLSDFGISKLLGDETSM---TQTQTLATIGYMAPEWKLS----------RKGDVYSYGIILMETFTK----------KKP 934 (1029)
Q Consensus 878 kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~----------~~~DvwSlGvil~elltg----------~~p 934 (1029)
||+|||++......... ......||+.|+|||++.+ .++|||||||++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999999876543322 1234568999999998533 479999999999999999 566
Q ss_pred CCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 935 TDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
|............+...... ......... ......++..+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCE----QKLRPNIPN-----RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTT----SCCCCCCCG-----GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHHHH----HHhCCCCcc-----cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 65432222111111110000 000000100 001235677899999999999999999999999999999876
Q ss_pred h
Q 036879 1015 L 1015 (1029)
Q Consensus 1015 ~ 1015 (1029)
.
T Consensus 338 ~ 338 (342)
T 1b6c_B 338 E 338 (342)
T ss_dssp T
T ss_pred h
Confidence 4
No 190
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.4e-37 Score=353.64 Aligned_cols=249 Identities=21% Similarity=0.277 Sum_probs=187.9
Q ss_pred hCCCCCC-ceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHH-hcCCCCceEEEEEEEec----CCeE
Q 036879 737 TDGFSEN-NLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEIL-GSIRHRNLVKIISTCSS----DHFK 809 (1029)
Q Consensus 737 ~~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 809 (1029)
.++|.+. +.||+|+||+||+|+.. +++.||||++... ..+.+|++++ +..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 68999999999999876 7899999998643 4567888887 45589999999999865 5678
Q ss_pred EEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a 885 (1029)
++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999997653 46999999999999999999999 678999999999999997 789999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
+....... .....||+.|+|||++ ++.++|||||||++|||++|+.||......... .........+
T Consensus 212 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~~------ 282 (400)
T 1nxk_A 212 KETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMG------ 282 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHHT------
T ss_pred cccCCCCc--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHcC------
Confidence 87643322 2345689999999985 677899999999999999999999764222110 0000000000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
...........++.++.+++.+||+.||++|||+.|++++-
T Consensus 283 ------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 283 ------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp ------CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ------cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000001123567789999999999999999999999864
No 191
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8.7e-38 Score=353.91 Aligned_cols=241 Identities=27% Similarity=0.340 Sum_probs=187.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc---hhhHHHHHHHHH-HhcCCCCceEEEEEEEecCCeEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE---GTLRSFDAECEI-LGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++++... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 457899999999999999999976 688999999986532 234456667776 577899999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++|+|.+++.. .+.+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999864 456889999999999999999999 778999999999999999999999999999864332
Q ss_pred CCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
.. ......||+.|+|||++ ++.++||||+||++|||++|+.||......+. .........
T Consensus 193 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-------------~~~i~~~~~-- 256 (373)
T 2r5t_A 193 NS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-------------YDNILNKPL-- 256 (373)
T ss_dssp CC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH-------------HHHHHHSCC--
T ss_pred CC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHhccc--
Confidence 22 23345799999999984 67789999999999999999999975311100 001111000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKE 1003 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~e 1003 (1029)
..+..++..+.+++.+|++.||++||++.+
T Consensus 257 ------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 257 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 111234667899999999999999999853
No 192
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.9e-37 Score=356.69 Aligned_cols=249 Identities=25% Similarity=0.344 Sum_probs=190.2
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--------chhhHHHHHHHHHHhcCCCCceEEEEEEEecC
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--------EGTLRSFDAECEILGSIRHRNLVKIISTCSSD 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 806 (1029)
..++|.+.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4678999999999999999999875 68999999997542 1123358899999999999999999999864
Q ss_pred CeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC---CcEEEEccC
Q 036879 807 HFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES---MVACLSDFG 883 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~---~~~kl~Dfg 883 (1029)
+..++||||+++|+|.+++. ....+++..+..++.|++.||+||| ++||+||||||+||+++.+ +.+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 45789999999999999874 4457999999999999999999999 6779999999999999754 459999999
Q ss_pred CceecCCCCCceeccccCCccccCccCCC-------CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchh
Q 036879 884 ISKLLGDETSMTQTQTLATIGYMAPEWKL-------SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGK 956 (1029)
Q Consensus 884 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 956 (1029)
+|+...... ......||+.|+|||++. +.++||||+||++|||++|+.||........ +...+..
T Consensus 288 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~~----- 359 (419)
T 3i6u_A 288 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITS----- 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHHT-----
T ss_pred cceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHhc-----
Confidence 998765432 223456999999999853 4479999999999999999999975321111 1110000
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 957 IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 957 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
............++..+.+++.+||+.||++|||++|++++
T Consensus 360 ----------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 ----------GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ----------TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----------CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000111123356789999999999999999999999975
No 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=346.45 Aligned_cols=250 Identities=17% Similarity=0.149 Sum_probs=201.8
Q ss_pred HhCCCCCCceeccCcceEEEEEE------ecCCcEEEEEEeecccchhhHHHHHHHHHHhcCC---CCceEEEEEEEecC
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGT------LSDGMQIAVKVFNLELEGTLRSFDAECEILGSIR---HRNLVKIISTCSSD 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~------~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 806 (1029)
..++|++.+.||+|+||+||+|+ ..+++.||||+++... ...+..|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45779999999999999999994 3468999999987543 356778888888886 99999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---------
Q 036879 807 HFKALVLEYMPNGSLENWMYN----KNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE--------- 873 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~--------- 873 (1029)
+..++||||+++|+|.+++.. ....+++..+..++.||+.||+||| ++|||||||||+||+++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999965 3567999999999999999999999 788999999999999998
Q ss_pred --CCcEEEEccCCceecCC-CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccc
Q 036879 874 --SMVACLSDFGISKLLGD-ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLK 946 (1029)
Q Consensus 874 --~~~~kl~Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~ 946 (1029)
++.+||+|||+|+.+.. ..........||++|+|||++ ++.++|||||||++|||++|+.||.....+.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 89999999999976532 222334456799999999984 67899999999999999999999865332211111
Q ss_pred hhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCC-CCHHHHHHHHHHhHHhhc
Q 036879 947 SRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEER-INIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 947 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-pt~~evl~~L~~i~~~~~ 1016 (1029)
... ... .....+.+++..|+..+|.+| |+++++.+.|+++.....
T Consensus 297 ~~~-----------------~~~--------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 297 GLF-----------------RRL--------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp SCC-----------------TTC--------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred hhc-----------------ccc--------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 000 000 013456789999999999998 588888888888776543
No 194
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.6e-36 Score=351.79 Aligned_cols=359 Identities=21% Similarity=0.179 Sum_probs=245.1
Q ss_pred hhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeeccccccc----ccCcccEEEccCCcccC
Q 036879 206 ELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTG----EIQGLQVLALSSNRLTG 281 (1029)
Q Consensus 206 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~----~l~~L~~L~Ls~N~l~~ 281 (1029)
..........+..+..++.+++|++|++++|++++. | .|+.+++|+.|++++|++++ .+++|++|+|++|+|++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 22 SEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp HHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC
T ss_pred HHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCce
Confidence 333334444555566777788888888888887753 4 57777777777777776663 45667788888888876
Q ss_pred CCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCC
Q 036879 282 VIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLG 361 (1029)
Q Consensus 282 ~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~ 361 (1029)
. | +.++++|++|++++|++.+ +| + ..+++|++|++++|++++. .++.+++|+.|++++|...+.++
T Consensus 100 ~-~--~~~l~~L~~L~L~~N~l~~-l~--~-~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~---- 165 (457)
T 3bz5_A 100 L-D--VTPLTKLTYLNCDTNKLTK-LD--V-SQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD---- 165 (457)
T ss_dssp C-C--CTTCTTCCEEECCSSCCSC-CC--C-TTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC----
T ss_pred e-e--cCCCCcCCEEECCCCcCCe-ec--C-CCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc----
Confidence 4 3 7778888888888888864 55 3 3578888888888888764 27777888888888885443331
Q ss_pred CCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccc
Q 036879 362 FCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELT 441 (1029)
Q Consensus 362 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 441 (1029)
+..+++|+.|++++|++++ +| +..+.. |+.|++++|++++. .++.+++|++|+|++|+++
T Consensus 166 -------------~~~l~~L~~L~ls~n~l~~-l~--l~~l~~-L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~ 225 (457)
T 3bz5_A 166 -------------VTPQTQLTTLDCSFNKITE-LD--VSQNKL-LNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLT 225 (457)
T ss_dssp -------------CTTCTTCCEEECCSSCCCC-CC--CTTCTT-CCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCS
T ss_pred -------------cccCCcCCEEECCCCccce-ec--cccCCC-CCEEECcCCcCCee---ccccCCCCCEEECcCCccc
Confidence 3456778888888888875 34 556554 77888888888754 3777788888888888887
Q ss_pred ccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCcc
Q 036879 442 GSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLW 521 (1029)
Q Consensus 442 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 521 (1029)
+ +| +..+++|++|++++|++++..+. .+++|+.|++++| +|+.|++++|.+.+.+| +.
T Consensus 226 ~-ip--~~~l~~L~~L~l~~N~l~~~~~~---~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~ 283 (457)
T 3bz5_A 226 E-ID--VTPLTQLTYFDCSVNPLTELDVS---TLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AE 283 (457)
T ss_dssp C-CC--CTTCTTCSEEECCSSCCSCCCCT---TCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CT
T ss_pred c-cC--ccccCCCCEEEeeCCcCCCcCHH---HCCCCCEEeccCC--------------CCCEEECCCCccCCccc--cc
Confidence 5 45 67778888888888888766533 3444444444433 23444455554444333 33
Q ss_pred CCCCCcEEEccCCcccCcCCc--------cccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCcccc
Q 036879 522 SLRDILNVNLSSNSLNGTLPV--------EIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLG 593 (1029)
Q Consensus 522 ~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 593 (1029)
.+++|+.|++++|...+.+|. .++++++|+.|++++|++++. + ++.+++|+.|++++|+|++
T Consensus 284 ~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~------- 353 (457)
T 3bz5_A 284 GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD------- 353 (457)
T ss_dssp TCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-------
T ss_pred ccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-------
Confidence 445555555555544333332 244557888888888888864 3 7888888888888888885
Q ss_pred CCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 594 GLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 594 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
++.|..|++++|.++|. ..+..|..+++++|+++|.+|.
T Consensus 354 -l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 354 -FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp -CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred -ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 24566778888888865 3567788899999999998875
No 195
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=350.20 Aligned_cols=262 Identities=16% Similarity=0.212 Sum_probs=195.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeecccch-----------hhHHHHHHHHHHhcCCCCceEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLELEG-----------TLRSFDAECEILGSIRHRNLVKIIS 801 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 801 (1029)
.++|++.+.||+|+||.||+|+.. ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999975 5788999998765321 1234678889999999999999999
Q ss_pred EEec----CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC--
Q 036879 802 TCSS----DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM-- 875 (1029)
Q Consensus 802 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~-- 875 (1029)
++.. ....++||||+ +++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9987 77889999999 999999986544 7999999999999999999999 67899999999999999877
Q ss_pred cEEEEccCCceecCCCCC------ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCccccccccc
Q 036879 876 VACLSDFGISKLLGDETS------MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISL 945 (1029)
Q Consensus 876 ~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 945 (1029)
.+||+|||+|+.+..... .......||+.|+|||++ ++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999987643211 111345799999999984 6778999999999999999999996422111111
Q ss_pred chhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 946 KSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 946 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
.. ........+..... . ......++..+.+++..||+.||++|||++++++.|+.+.-
T Consensus 271 ~~-~~~~~~~~~~~~~~----~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QT-AKTNLLDELPQSVL----K-----WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HH-HHHHHHHTTTHHHH----H-----HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HH-HHHhhcccccHHHH----h-----hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00 00000000000000 0 00001356789999999999999999999999999987653
No 196
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6.7e-37 Score=335.16 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=201.4
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch------hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG------TLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
++|++.+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999986 7999999998765321 3567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC----cEEEEccCCce
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM----VACLSDFGISK 886 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~----~~kl~Dfg~a~ 886 (1029)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999854 456899999999999999999999 67899999999999998877 89999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
....... .....+++.|+|||++ ++.++||||||+++|||++|+.||......+. ......
T Consensus 161 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------------~~~~~~ 225 (283)
T 3bhy_A 161 KIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-------------LTNISA 225 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHT
T ss_pred eccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-------------HHHhHh
Confidence 7654322 2335689999999973 57789999999999999999999975321100 000000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH--HHHHhHHh
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT--KLLKIRNT 1014 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~--~L~~i~~~ 1014 (1029)
............++..+.+++.+||..||++|||+.|+++ .++.+.+.
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 226 ----VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp ----TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred ----cccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0000001112334677899999999999999999999998 45555543
No 197
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.6e-37 Score=341.57 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=203.3
Q ss_pred HhCCCCCCc-eeccCcceEEEEEEec---CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 736 ATDGFSENN-LLGKGSFGSVYKGTLS---DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 736 ~~~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
..++|++.+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++.++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345677777 9999999999999642 47889999997653 23356799999999999999999999999 55678
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 93 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 899999999999999965 456899999999999999999999 6789999999999999999999999999998775
Q ss_pred CCCCce--eccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 890 DETSMT--QTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 890 ~~~~~~--~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
...... .....+++.|+|||.. ++.++||||||+++|||++ |+.||......+ .. ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~------------~~~~ 234 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT------------AMLE 234 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH------------HHHH
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HH------------HHHH
Confidence 443322 1223467889999984 5678999999999999999 999997632111 00 0000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
... ....+..++..+.+++.+||+.||++||++.|+++.|+.+......
T Consensus 235 ~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 235 KGE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp TTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred cCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 000 0111234567899999999999999999999999999999876643
No 198
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=355.90 Aligned_cols=274 Identities=20% Similarity=0.278 Sum_probs=208.8
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC--eEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH--FKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 812 (1029)
.++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 456889999999999999999976 69999999997543 234567889999999999999999999998754 77999
Q ss_pred EeccCCCCHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE----CCCCcEEEEccCCce
Q 036879 813 LEYMPNGSLENWMYNKN--RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL----NESMVACLSDFGISK 886 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill----~~~~~~kl~Dfg~a~ 886 (1029)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999996543 23899999999999999999999 6779999999999999 788889999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
....... .....||+.|+|||++ ++.++|||||||++|||++|+.||......... .........
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKIIT 241 (396)
T ss_dssp ECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHHHH
T ss_pred EccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHHhc
Confidence 7654322 2335699999999974 345899999999999999999999653221111 111111110
Q ss_pred hhhhh----h---hhh--hhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 955 GKIIN----V---VDI--NLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 955 ~~~~~----~---~d~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
+.... . ... ................+..+.+++.+||+.||++||+++|+++.++++.+...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~~ 312 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMV 312 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCEE
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhceE
Confidence 00000 0 000 00000000112235567889999999999999999999999999998876543
No 199
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.4e-37 Score=336.16 Aligned_cols=248 Identities=25% Similarity=0.384 Sum_probs=196.8
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEecc
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 816 (1029)
+.|.....||+|+||.||+|+.. +++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34555679999999999999975 78999999998776666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC-CCcEEEEccCCceecCCCCC
Q 036879 817 PNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE-SMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
++++|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||.+........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999976533 4678889999999999999999 678999999999999987 89999999999987654322
Q ss_pred ceeccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
......|++.|+|||+. ++.++||||||+++|||++|+.||........... .. ...
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------------~~---~~~- 241 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF------------KV---GMF- 241 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH------------HH---HHH-
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH------------hh---ccc-
Confidence 22335689999999983 56789999999999999999999965311111000 00 000
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+..++..+.+++.+||+.||++|||+.|++++
T Consensus 242 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 --KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp --CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred --cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011123456778999999999999999999999864
No 200
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.7e-37 Score=358.11 Aligned_cols=262 Identities=20% Similarity=0.238 Sum_probs=192.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecc--cchhhHHHHHHHHHHhcCCCCceEEEEEEEecC------
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLE--LEGTLRSFDAECEILGSIRHRNLVKIISTCSSD------ 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 806 (1029)
..++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999875 7899999999765 234456788999999999999999999999654
Q ss_pred CeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 807 HFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
...|+||||+++ ++.+++. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 467999999965 5666663 34889999999999999999999 6789999999999999999999999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh----------c
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND----------S 952 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----------~ 952 (1029)
...... .....+||+.|+|||++ ++.++||||+||++|||++|+.||.+....+. +...+.. .
T Consensus 213 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 213 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTT
T ss_pred ecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHH
Confidence 764432 23346799999999984 67899999999999999999999976321110 0000000 0
Q ss_pred cchhhhhhhhhhh----------hhh--hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 953 LHGKIINVVDINL----------LQK--EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 953 ~~~~~~~~~d~~~----------~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........++... ... ...........+..+.+++.+|+..||++|||++|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000000 000 000011122346789999999999999999999999985
No 201
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=345.51 Aligned_cols=256 Identities=23% Similarity=0.287 Sum_probs=190.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEe--------cC
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCS--------SD 806 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~ 806 (1029)
..+|++.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457889999999999999999975 78999999997776666778999999999996 999999999983 34
Q ss_pred CeEEEEEeccCCCCHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEECCCCcEEEEcc
Q 036879 807 HFKALVLEYMPNGSLENWMYN--KNRSFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLNESMVACLSDF 882 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~~~~~~kl~Df 882 (1029)
...++||||++ |+|.+++.. ....+++..+..++.|++.||+||| +.| |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 56789999995 799998864 4556999999999999999999999 777 999999999999999999999999
Q ss_pred CCceecCCCCCce-----------eccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccc
Q 036879 883 GISKLLGDETSMT-----------QTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEIS 944 (1029)
Q Consensus 883 g~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 944 (1029)
|++.......... .....||+.|+|||++ ++.++|||||||++|||++|+.||........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~- 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI- 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence 9998765432211 1134589999999985 45689999999999999999999965321110
Q ss_pred cchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcccc
Q 036879 945 LKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTNI 1019 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~~ 1019 (1029)
..... . ...+..++..+.+++.+||+.||++|||+.|++++|+.+........
T Consensus 262 ----~~~~~------------~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 262 ----VNGKY------------S------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp --------C------------C------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred ----hcCcc------------c------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 00000 0 00001123447889999999999999999999999999987655433
No 202
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-36 Score=344.43 Aligned_cols=266 Identities=23% Similarity=0.300 Sum_probs=199.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEec--------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSS-------- 805 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 805 (1029)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467999999999999999999974 799999999865532 234578899999999999999999999976
Q ss_pred CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCc
Q 036879 806 DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGIS 885 (1029)
Q Consensus 806 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a 885 (1029)
.+..++||||++ +++.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 346899999996 5888888777778999999999999999999999 778999999999999999999999999999
Q ss_pred eecCCCC---CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhc---hhccc
Q 036879 886 KLLGDET---SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRV---NDSLH 954 (1029)
Q Consensus 886 ~~~~~~~---~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~---~~~~~ 954 (1029)
+.+.... ........||+.|+|||++ ++.++||||+||++|||++|+.||........ ..... .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCh
Confidence 8765321 1222345689999999973 57789999999999999999999976322111 00000 00000
Q ss_pred hhhhhhhhhhh------h--hhhhhh-hHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 955 GKIINVVDINL------L--QKEDAY-LTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 955 ~~~~~~~d~~~------~--~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..+........ . ...... .-.....++.+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000 0 000000 00011125668999999999999999999999985
No 203
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=351.63 Aligned_cols=266 Identities=13% Similarity=0.137 Sum_probs=205.0
Q ss_pred hCCCCCCceeccCcceEEEEEEecC---------CcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEE---------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSD---------GMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVK--------- 798 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 798 (1029)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4689999999999999999998763 789999998754 46889999999999999987
Q ss_pred ------EEEEEec-CCeEEEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEE
Q 036879 799 ------IISTCSS-DHFKALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNIL 870 (1029)
Q Consensus 799 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nil 870 (1029)
+++++.. ....++||||+ +++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5677765 78889999999 99999999765 467999999999999999999999 678999999999999
Q ss_pred ECCCC--cEEEEccCCceecCCCCCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcc
Q 036879 871 LNESM--VACLSDFGISKLLGDETSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDEL 938 (1029)
Q Consensus 871 l~~~~--~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~ 938 (1029)
++.++ .+||+|||+++.+...... ......||+.|+|||++ ++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999866432111 11334799999999984 567899999999999999999999764
Q ss_pred cccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhccc
Q 036879 939 FVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLTN 1018 (1029)
Q Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~~ 1018 (1029)
......+...... .........+. . .....++..+.+++.+||+.||++|||++++++.|+++.+.....
T Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 272 LPNTEDIMKQKQK-FVDKPGPFVGP-----C----GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp TTCHHHHHHHHHH-HHHSCCCEECT-----T----SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHh-ccCChhhhhhh-----c----cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 2111111110000 00000000000 0 000123577999999999999999999999999999999887655
Q ss_pred ccC
Q 036879 1019 IEN 1021 (1029)
Q Consensus 1019 ~~~ 1021 (1029)
.+.
T Consensus 342 ~~~ 344 (352)
T 2jii_A 342 PYD 344 (352)
T ss_dssp TTS
T ss_pred cCc
Confidence 443
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-36 Score=333.62 Aligned_cols=245 Identities=24% Similarity=0.380 Sum_probs=195.9
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEec----CCeEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSS----DHFKA 810 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 810 (1029)
..|.+.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 44777889999999999999875 78899999987543 3345678999999999999999999999865 45689
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEEcCCCCCCEEEC-CCCcEEEEccCCcee
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTP--IIHCDLNPSNILLN-ESMVACLSDFGISKL 887 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~g--ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~~ 887 (1029)
+||||+++++|.+++.. ...+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999999964 356899999999999999999999 777 99999999999998 889999999999975
Q ss_pred cCCCCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhh
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDIN 964 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 964 (1029)
..... .....||+.|+|||++ ++.++||||+||++|+|++|+.||............. .. .
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~------------~~-~ 245 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV------------TS-G 245 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH------------TT-T
T ss_pred ccccc---cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH------------hc-c
Confidence 54332 2235689999999984 6779999999999999999999996532111111000 00 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 965 LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. .....+...+..+.+++.+||+.||++|||++|++++
T Consensus 246 ~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 246 V-----KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp C-----CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C-----CccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 0011112234678999999999999999999999874
No 205
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=351.84 Aligned_cols=251 Identities=24% Similarity=0.292 Sum_probs=201.2
Q ss_pred hCCCCCCceeccCcceEEEEEEe----cCCcEEEEEEeeccc----chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCC
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL----SDGMQIAVKVFNLEL----EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDH 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 807 (1029)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 45789999999999999999987 378999999987542 23345677899999999 6999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999998653 46899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCceeccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
+............||+.|+|||++ ++.++|||||||++|||++|+.||........ ... +...+
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~---------~~~~~ 278 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAE---------ISRRI 278 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHH---------HHHHH
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHH---------HHHHH
Confidence 654333333345799999999984 45689999999999999999999975321111 000 00000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCC-----CHHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-----NIKEALTKL 1008 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----t~~evl~~L 1008 (1029)
... ....+..++..+.+++.+||..||++|| +++|++++.
T Consensus 279 ---~~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 ---LKS----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---HHC----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---hcc----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 000 0111233466789999999999999999 999999864
No 206
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.8e-37 Score=363.34 Aligned_cols=248 Identities=24% Similarity=0.340 Sum_probs=196.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||+||+|+.. ++..||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346899999999999999999976 78999999997653 234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a~~~~~ 890 (1029)
||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++. ++.+||+|||+|..+..
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988543 56899999999999999999999 678999999999999975 45699999999987654
Q ss_pred CCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
... .....||+.|+|||++ ++.++||||+||++|+|++|+.||......+. ... ... .
T Consensus 192 ~~~--~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~-----------i~~----~ 252 (494)
T 3lij_A 192 QKK--MKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI--LRK-----------VEK----G 252 (494)
T ss_dssp TBC--BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-----------HHH----T
T ss_pred Ccc--ccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHH-----------HHh----C
Confidence 322 2345699999999984 67899999999999999999999976321110 000 000 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+....++..+.+++.+||+.||++|||+.|++++
T Consensus 253 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0000011112346778999999999999999999999975
No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.4e-37 Score=361.75 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=200.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc-------------hhhHHHHHHHHHHhcCCCCceEEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-------------GTLRSFDAECEILGSIRHRNLVKIIS 801 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 801 (1029)
..++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999976 689999999875431 23467889999999999999999999
Q ss_pred EEecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC---cEE
Q 036879 802 TCSSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM---VAC 878 (1029)
Q Consensus 802 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~---~~k 878 (1029)
++.+....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999988553 56999999999999999999999 67899999999999998775 699
Q ss_pred EEccCCceecCCCCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 879 LSDFGISKLLGDETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 879 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
|+|||+|........ .....||+.|+|||++ ++.++||||+||++|+|++|+.||......+. . .
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~---~----- 257 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI--I---K----- 257 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H---H-----
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH--H---H-----
Confidence 999999987754322 2345699999999984 67899999999999999999999976321110 0 0
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.+. .............++..+.+++.+|+..||++|||++|++++-
T Consensus 258 ---~i~----~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 258 ---KVE----KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp ---HHH----HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---HHH----cCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 000 0000001111234567899999999999999999999999753
No 208
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.7e-37 Score=336.52 Aligned_cols=248 Identities=24% Similarity=0.397 Sum_probs=201.3
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec---------
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS--------- 805 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 805 (1029)
...+|++.+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467899999999999999999986 79999999987553 456789999999999999999998854
Q ss_pred -------CCeEEEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcE
Q 036879 806 -------DHFKALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVA 877 (1029)
Q Consensus 806 -------~~~~~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~ 877 (1029)
....++||||+++++|.+++... ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 44578999999999999999654 357899999999999999999999 6789999999999999999999
Q ss_pred EEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc
Q 036879 878 CLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL 953 (1029)
Q Consensus 878 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 953 (1029)
||+|||++........ .....+++.|+|||+. ++.++||||||+++|||++|+.|+.... ..
T Consensus 162 kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~----- 227 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KF----- 227 (284)
T ss_dssp EECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HH-----
T ss_pred EECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HH-----
Confidence 9999999987654322 2335689999999983 6788999999999999999998864310 00
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhcc
Q 036879 954 HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLLT 1017 (1029)
Q Consensus 954 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~~ 1017 (1029)
......... +..++..+.+++.+||+.||++|||+.|++++++.+.++...
T Consensus 228 ---~~~~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 228 ---FTDLRDGII----------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp ---HHHHHTTCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred ---HHHhhcccc----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 000000000 112356688999999999999999999999999998876543
No 209
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.1e-37 Score=338.17 Aligned_cols=248 Identities=29% Similarity=0.463 Sum_probs=194.7
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecC-CeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSD-HFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|+. .|+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46788999999999999999987 48899999987543 456789999999999999999999997554 578999999
Q ss_pred cCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 816 MPNGSLENWMYNKNR-SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
+++++|.+++..... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999965433 3788999999999999999999 6789999999999999999999999999997654321
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKE 969 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 969 (1029)
....+++.|+|||.. ++.++||||||+++|||++ |+.||......+. ... +...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~------------~~~~----- 230 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPR------------VEKG----- 230 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHH------------HTTT-----
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH------------HhcC-----
Confidence 223578899999984 6778999999999999998 9999875321110 000 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHh
Q 036879 970 DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNT 1014 (1029)
Q Consensus 970 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~ 1014 (1029)
.....+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 231 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 -YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00111234567899999999999999999999999999998764
No 210
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.7e-37 Score=334.37 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=201.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457899999999999999999976 78999999997553 3345778999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC-C
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET-S 893 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 893 (1029)
|+++++|.+++. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+....... .
T Consensus 86 ~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999874 3456899999999999999999999 6789999999999999999999999999998654321 1
Q ss_pred ceeccccCCccccCccCCC-----CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 894 MTQTQTLATIGYMAPEWKL-----SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~~-----~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.......|++.|+|||... +.++||||+|+++|||++|+.||.........+..+.... .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------~--- 226 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------------T--- 226 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC------------T---
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc------------c---
Confidence 1223456899999999852 4579999999999999999999976432222111111100 0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.......++..+.+++.+||+.||++|||++|++++
T Consensus 227 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 227 ---YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 000112346678999999999999999999999874
No 211
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.9e-37 Score=362.68 Aligned_cols=248 Identities=26% Similarity=0.320 Sum_probs=200.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999976 79999999997542 234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC---CCCcEEEEccCCceecCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN---ESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~---~~~~~kl~Dfg~a~~~~~ 890 (1029)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||||||+||+++ .++.+||+|||+|+.+..
T Consensus 101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999988554 56899999999999999999999 77899999999999995 567899999999986644
Q ss_pred CCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQ 967 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 967 (1029)
... .....||+.|+|||++ ++.++||||+||++|+|++|+.||......+. .. .+. ..
T Consensus 177 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~-----------~i~----~~ 237 (486)
T 3mwu_A 177 NTK--MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI--LK-----------RVE----TG 237 (486)
T ss_dssp C------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HH-----------HHH----HT
T ss_pred CCc--cCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH-----------HHH----hC
Confidence 322 2345799999999985 56789999999999999999999975321110 00 000 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 968 KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 968 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+....++..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 238 KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011123356778999999999999999999999986
No 212
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.1e-37 Score=335.60 Aligned_cols=243 Identities=25% Similarity=0.373 Sum_probs=200.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 457889999999999999999876 68899999987542 22346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998654 46899999999999999999999 7889999999999999999999999999997654322
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
.....|++.|+|||++ ++.++||||+|+++|||++|+.||......+. ........
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------------~~~~~~~~---- 228 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------------HRRIVNVD---- 228 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHTTC----
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-------------HHHHhccc----
Confidence 2335689999999983 57799999999999999999999975321110 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++..+.+++.+|++.||++|||++|++++
T Consensus 229 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 229 ----LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 01112346678999999999999999999999984
No 213
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.5e-37 Score=338.54 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=201.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467889999999999999999976 68899999987653 23456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++.. ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999999998854 356899999999999999999999 6789999999999999999999999999998764332
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
. ......|++.|+|||.. ++.++||||+|+++|||++|+.||......+. ........
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------------~~~~~~~~---- 231 (294)
T 2rku_A 170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-------------YLRIKKNE---- 231 (294)
T ss_dssp C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHTTC----
T ss_pred c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------HHHHhhcc----
Confidence 2 22345689999999984 57789999999999999999999975321110 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
...+..++..+.+++.+||+.||++|||++|++++-
T Consensus 232 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 232 ----YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ----CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 011123456789999999999999999999999864
No 214
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-37 Score=347.83 Aligned_cols=260 Identities=23% Similarity=0.296 Sum_probs=192.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH------ 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 807 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 567999999999999999999975 79999999986542 334567889999999999999999999997653
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 8899999865 46899999999999999999999 77899999999999999999999999999987
Q ss_pred cCCCCCceeccccCCccccCccC-----CCCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh--ccchh----
Q 036879 888 LGDETSMTQTQTLATIGYMAPEW-----KLSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND--SLHGK---- 956 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~---- 956 (1029)
.... .....+|+.|+|||+ .++.++||||+||++|||++|+.||.+....+. +...... .....
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHT
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHH
Confidence 6432 233568999999997 367899999999999999999999975321110 0000000 00000
Q ss_pred -----hhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 957 -----IINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 957 -----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
....+..................+..+.+++.+|+..||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000000000000000011112346778999999999999999999999984
No 215
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.1e-37 Score=345.00 Aligned_cols=250 Identities=25% Similarity=0.353 Sum_probs=197.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
..++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3567899999999999999999986 689999999987666667789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 99999999999776778999999999999999999999 678999999999999999999999999987543211 11
Q ss_pred eeccccCCccccCccCC---------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK---------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~---------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
......|++.|+|||++ ++.++|||||||++|||++|+.||........ . .......
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~--------~~~~~~~- 238 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----L--------LKIAKSD- 238 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----H--------HHHHHSC-
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----H--------HHHhccC-
Confidence 11234689999999974 46789999999999999999999875321110 0 0000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+..++..+.+++.+||+.||++|||+.+++++
T Consensus 239 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 239 ----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00001122346678999999999999999999999863
No 216
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.7e-37 Score=363.90 Aligned_cols=249 Identities=26% Similarity=0.360 Sum_probs=203.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 456899999999999999999976 79999999997543 33457799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 889 (1029)
|||+.+|+|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+|..+.
T Consensus 105 ~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHT-CSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999998854 456999999999999999999999 6789999999999999 578899999999998765
Q ss_pred CCCCceeccccCCccccCccC---CCCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEW---KLSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~---~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.... .....||+.|+|||+ .++.++||||+||++|+|++|++||......+. ...+ ..
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i-----------~~---- 241 (484)
T 3nyv_A 181 ASKK--MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKV-----------EK---- 241 (484)
T ss_dssp CCCS--HHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-----------HH----
T ss_pred cccc--cccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-----------Hc----
Confidence 4332 233569999999998 468899999999999999999999976321110 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.......+....++..+.+++.+||+.||++|||+.|++++-
T Consensus 242 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 242 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 000000111223567789999999999999999999999853
No 217
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-37 Score=340.51 Aligned_cols=247 Identities=24% Similarity=0.322 Sum_probs=197.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456889999999999999999976 7999999999866554556789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecCCCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 9999999988543 46899999999999999999999 6789999999999999 78899999999999754332
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
......|++.|+|||++ ++.++||||+||++|||++|+.||....... ... ......
T Consensus 163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~-----------~i~~~~---- 223 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFE-----------KIKEGY---- 223 (304)
T ss_dssp --TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHH-----------HHHHCC----
T ss_pred --ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHH-----------HHHcCC----
Confidence 12234689999999985 4668999999999999999999996532110 000 000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..........++..+.+++.+|++.||++|||++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 224 YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000001112346778999999999999999999999974
No 218
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.7e-36 Score=352.16 Aligned_cols=261 Identities=18% Similarity=0.269 Sum_probs=206.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCC-CceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRH-RNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 468999999999999999999974 799999998775432 3468899999999976 556666667777889999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE---CCCCcEEEEccCCceecCCC
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---NESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
|+ +++|.+++......+++..++.++.||+.||+||| ++|||||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 99999999877788999999999999999999999 6789999999999999 68899999999999876543
Q ss_pred CCc------eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 892 TSM------TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 892 ~~~------~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
... ......||+.|+|||++ ++.++|||||||++|||++|+.||........ ... +....
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~--------~~~i~ 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQK--------YEKIS 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHH--------HHHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHH--------HHHHh
Confidence 221 12245799999999984 56789999999999999999999976422111 000 11111
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
..... .........++.++.+++..||+.+|++||++.++++.|+++.....
T Consensus 230 ~~~~~---~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 230 EKKVA---TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp HHHHH---SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred hcccc---ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 11110 00112223457789999999999999999999999999999876553
No 219
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.7e-37 Score=344.79 Aligned_cols=245 Identities=22% Similarity=0.296 Sum_probs=201.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467888999999999999999976 68899999987653 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999999998854 456899999999999999999999 6789999999999999999999999999998764332
Q ss_pred CceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQK 968 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 968 (1029)
. ......|++.|+|||++ ++.++|||||||++|||++|+.||......+. ........
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------------~~~~~~~~---- 257 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-------------YLRIKKNE---- 257 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHTC----
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-------------HHHHhcCC----
Confidence 2 22345689999999984 67789999999999999999999975321110 00000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 969 EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 969 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++..+.+++.+||+.||++|||++|++++
T Consensus 258 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 ----YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01112345678999999999999999999999985
No 220
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-36 Score=353.92 Aligned_cols=347 Identities=21% Similarity=0.191 Sum_probs=264.4
Q ss_pred EEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCc
Q 036879 271 VLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYN 350 (1029)
Q Consensus 271 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 350 (1029)
.++.++++++ .+|..+. ++++.|+|++|++.+ ++...+..+++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4566666666 3444432 466777777777753 33333335777777777777777666777777777777777777
Q ss_pred cccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcC
Q 036879 351 LFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNL 430 (1029)
Q Consensus 351 ~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L 430 (1029)
.+.+..+.. +..+++|++|+|++|++.+..|..+..+.+ |++|++++|.+++..+..|.++++|
T Consensus 91 ~l~~~~~~~---------------~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L 154 (477)
T 2id5_A 91 RLKLIPLGV---------------FTGLSNLTKLDISENKIVILLDYMFQDLYN-LKSLEVGDNDLVYISHRAFSGLNSL 154 (477)
T ss_dssp CCCSCCTTS---------------STTCTTCCEEECTTSCCCEECTTTTTTCTT-CCEEEECCTTCCEECTTSSTTCTTC
T ss_pred cCCccCccc---------------ccCCCCCCEEECCCCccccCChhHcccccc-CCEEECCCCccceeChhhccCCCCC
Confidence 776443332 235677777778777777777777777766 8888888888887777888888888
Q ss_pred cEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCc
Q 036879 431 TTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFN 510 (1029)
Q Consensus 431 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 510 (1029)
++|+|++|++++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|...+.+|.......+|++|+|++|
T Consensus 155 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n 234 (477)
T 2id5_A 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234 (477)
T ss_dssp CEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESS
T ss_pred CEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCC
Confidence 88888888888766677888888888888888888888888888888888888888877777777666778999999999
Q ss_pred cccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCc
Q 036879 511 RLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPD 590 (1029)
Q Consensus 511 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 590 (1029)
+++++.+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+.
T Consensus 235 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 314 (477)
T 2id5_A 235 NLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEES 314 (477)
T ss_dssp CCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGG
T ss_pred cccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHh
Confidence 99877667888899999999999999988888889999999999999999988888999999999999999999977777
Q ss_pred cccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 591 SLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 591 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
.|..+++|++|+|++|+++...+ ..+-+..+..+++.++...+..|.
T Consensus 315 ~~~~l~~L~~L~l~~N~l~c~c~-~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 315 VFHSVGNLETLILDSNPLACDCR-LLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp GBSCGGGCCEEECCSSCEECSGG-GHHHHTTTTSSCCTTCCCBEEESG
T ss_pred HcCCCcccCEEEccCCCccCccc-hHhHHhhhhccccCccCceeCCch
Confidence 78889999999999999885433 222233344566777777665553
No 221
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.7e-37 Score=359.76 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=201.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|+..+.||+|+||+||+|+.. +|+.||+|++.+.. ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999986 79999999997653 23346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNK---NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|||++||+|.+++... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999998654 346999999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
..... .....||+.|+|||++ ++.++||||+||++|||++|+.||....... ...... ......
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~--------~~i~~~-- 408 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELK--------QRVLEQ-- 408 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHH--------HHHHHC--
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHH--------HHHhhc--
Confidence 43322 2335799999999984 6788999999999999999999997532110 000000 000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH-----HHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI-----KEALT 1006 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~evl~ 1006 (1029)
....+..++..+.+++.+||..||++||++ +++++
T Consensus 409 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 409 ------AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ------ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 011123456788999999999999999965 66765
No 222
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.6e-37 Score=343.92 Aligned_cols=267 Identities=23% Similarity=0.307 Sum_probs=191.8
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
....++|++.+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 445678999999999999999999865 789999999975532 23456789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE-----CCCCcEEEEccCCc
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL-----NESMVACLSDFGIS 885 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill-----~~~~~~kl~Dfg~a 885 (1029)
+||||++ |+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||++ +..+.+||+|||++
T Consensus 110 lv~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997 5999998654 46899999999999999999999 6789999999999999 45566999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc---cchhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS---LHGKI 957 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~ 957 (1029)
+....... ......+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +....... ....+
T Consensus 185 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 185 RAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-LFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTS
T ss_pred cccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-HHHHHHHhCCCchhhh
Confidence 87653322 22345689999999973 57789999999999999999999975322111 00000000 00000
Q ss_pred hhhh---hh--hh--hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 958 INVV---DI--NL--LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 958 ~~~~---d~--~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.... +. .. ..........+..++.++.+++.+|++.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 00 00 000000111122356778999999999999999999999874
No 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1e-36 Score=341.71 Aligned_cols=259 Identities=17% Similarity=0.259 Sum_probs=197.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEec--CCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSS--DHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||+++... .+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 467899999999999999999864 78999999987432 467889999999997 9999999999987 6678999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCC-cEEEEccCCceecCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESM-VACLSDFGISKLLGDE 891 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~ 891 (1029)
|||+++++|.+++. .+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+|+.....
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999874 3889999999999999999999 77899999999999999776 8999999999876543
Q ss_pred CCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.. .....+++.|+|||++ ++.++||||+||++|||++|+.||.........+.............+.++....
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 2335689999999973 5678999999999999999999995432221111111110000011111110000
Q ss_pred h---------------hh--hhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 967 Q---------------KE--DAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 967 ~---------------~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. .. ......+..++..+.+++.+|++.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 00 00001112256789999999999999999999999974
No 224
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.9e-37 Score=347.26 Aligned_cols=272 Identities=21% Similarity=0.262 Sum_probs=199.3
Q ss_pred CHHHHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc-----------hhhHHHHHHHHHHhcCCCCceE
Q 036879 729 SYQELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE-----------GTLRSFDAECEILGSIRHRNLV 797 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 797 (1029)
...++....++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 34567788899999999999999999999988899999999865322 1236789999999999999999
Q ss_pred EEEEEEec-----CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC
Q 036879 798 KIISTCSS-----DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN 872 (1029)
Q Consensus 798 ~l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~ 872 (1029)
++++++.. ....++||||++ |+|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 99999843 346899999997 6999988877778999999999999999999999 67799999999999999
Q ss_pred CCCcEEEEccCCceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccch
Q 036879 873 ESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKS 947 (1029)
Q Consensus 873 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~ 947 (1029)
.++.+||+|||++....... ......+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +..
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~ 245 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ-LNK 245 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 99999999999997543322 22345689999999973 56789999999999999999999976321110 000
Q ss_pred hchhccchh-----------hhhhhhhhhhh-hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 948 RVNDSLHGK-----------IINVVDINLLQ-KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 948 ~~~~~~~~~-----------~~~~~d~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.+....... ..+........ ...........++..+.+++.+|++.||++|||++|++++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000 00000000000 0001111223346778999999999999999999999984
No 225
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-37 Score=344.22 Aligned_cols=258 Identities=24% Similarity=0.385 Sum_probs=202.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEe------cCCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL------SDGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
..++|++.+.||+|+||.||+|++ .+++.||||.+.... ......+.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 356799999999999999999984 257789999997543 3445678999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEE
Q 036879 809 KALVLEYMPNGSLENWMYNKN------RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACL 879 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl 879 (1029)
.++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence 999999999999999997654 34889999999999999999999 678999999999999984 456999
Q ss_pred EccCCceecCCCCC-ceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhcc
Q 036879 880 SDFGISKLLGDETS-MTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSL 953 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 953 (1029)
+|||++........ .......+++.|+|||++ ++.++|||||||++|||++ |+.||......+ ..
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~------- 255 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL------- 255 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH-------
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HH-------
Confidence 99999975433221 122335678999999973 6789999999999999998 999986531110 00
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 954 HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 954 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
+.+.... ....+..++..+.+++.+||+.||++||++.|++++++.+.....
T Consensus 256 -----~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 256 -----EFVTSGG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp -----HHHHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred -----HHHhcCC------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 0000000 001122356778999999999999999999999999999886543
No 226
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-36 Score=336.38 Aligned_cols=247 Identities=26% Similarity=0.362 Sum_probs=202.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.+.|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456888999999999999999875 78999999997654 3446789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++++|.+++. ...+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLE--PGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 999999999984 356899999999999999999999 67899999999999999999999999999987654322
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKED 970 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 970 (1029)
......|++.|+|||+. ++.++||||||+++|||++|+.||........ ... +....
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~--------~~~~~--------- 235 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFL--------IPKNN--------- 235 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHH--------HHHSC---------
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHH--------hhcCC---------
Confidence 22345689999999984 57789999999999999999999875321110 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHH
Q 036879 971 AYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLL 1009 (1029)
Q Consensus 971 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1009 (1029)
....+..++..+.+++.+||+.||++|||+.|++++..
T Consensus 236 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 236 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp -CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred -CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 00111234567899999999999999999999998653
No 227
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.4e-37 Score=370.51 Aligned_cols=247 Identities=26% Similarity=0.426 Sum_probs=196.5
Q ss_pred ceeccCcceEEEEEEec---CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEeccCC
Q 036879 744 NLLGKGSFGSVYKGTLS---DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLEYMPN 818 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~---~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 818 (1029)
+.||+|+||+||+|.+. .++.||||+++.... ...+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 468899999976532 335789999999999999999999999975 457899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC--cee
Q 036879 819 GSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS--MTQ 896 (1029)
Q Consensus 819 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~ 896 (1029)
|+|.+++.. ...+++..+..++.||+.||+||| ++|||||||||+||+++.++.+||+|||+|+.+..... ...
T Consensus 454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 999999954 456899999999999999999999 67799999999999999999999999999987654322 122
Q ss_pred ccccCCccccCccC----CCCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhh
Q 036879 897 TQTLATIGYMAPEW----KLSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDA 971 (1029)
Q Consensus 897 ~~~~gt~~y~aPE~----~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 971 (1029)
....+|+.|+|||+ .++.++|||||||++|||++ |+.||......+. ...+... .
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--------------~~~i~~~------~ 589 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--------------TAMLEKG------E 589 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------------HHHHHTT------C
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcC------C
Confidence 33456789999998 36789999999999999998 9999976321110 0111100 0
Q ss_pred hhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 972 YLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 972 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
....+..++.++.++|..||+.||++||+++++++.|+++..++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 11122346788999999999999999999999999999988765
No 228
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=338.58 Aligned_cols=248 Identities=26% Similarity=0.354 Sum_probs=198.1
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||+|.+.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4678999999999999999999876 68999999987543 34678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 99999999999766778999999999999999999999 67899999999999999999999999999987644322
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhh
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKED 970 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 970 (1029)
......|++.|+|||.+ ++.++||||||+++|||++|+.||......... .. .. ....
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------------~~-~~----~~~~ 242 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-------------FM-IP----TNPP 242 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HH-HH----HSCC
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-------------HH-Hh----cCCC
Confidence 22345689999999983 578999999999999999999999753211100 00 00 0000
Q ss_pred hhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 971 AYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 971 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.....+..++..+.+++.+||+.||++|||+.+++++
T Consensus 243 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 243 PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0001122346778999999999999999999999874
No 229
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.4e-37 Score=344.58 Aligned_cols=264 Identities=23% Similarity=0.307 Sum_probs=196.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467889999999999999999976 689999999865532 23456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||+++++|.++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999988888764 4556999999999999999999999 77899999999999999999999999999986644322
Q ss_pred ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh--ccchhhhhh------
Q 036879 894 MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND--SLHGKIINV------ 960 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~------ 960 (1029)
......|++.|+|||++ ++.++||||+||++|||++|+.||......+. +...... .........
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhccc
Confidence 22345689999999973 56789999999999999999999976422111 0000000 000000000
Q ss_pred ----hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 ----VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ----~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...... ...........++..+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIK-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCS-SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCcccc-ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 0000111122457789999999999999999999999974
No 230
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-37 Score=346.68 Aligned_cols=268 Identities=23% Similarity=0.285 Sum_probs=196.8
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc-----hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-----GTLRSFDAECEILGSIRHRNLVKIISTCSSDHF 808 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 808 (1029)
...++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34678999999999999999999975 689999999875422 123568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||+++ +|.+++......+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999975 899998777777899999999999999999999 677999999999999999999999999999876
Q ss_pred CCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc---cchhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS---LHGKIINV 960 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~ 960 (1029)
..... ......+|+.|+|||++ ++.++||||+||++|||++|.+||......+. +....... ....+.+.
T Consensus 163 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 163 GSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSSST
T ss_pred cCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHcCCCChhhhhhh
Confidence 43322 23345689999999974 45689999999999999999999875321111 11000000 00000000
Q ss_pred ---hhhhhhhh--hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 961 ---VDINLLQK--EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 961 ---~d~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.+...... ..+.......++..+.+++.+|++.||++|||++|++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000000 0000111123467899999999999999999999999853
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-36 Score=340.31 Aligned_cols=247 Identities=26% Similarity=0.349 Sum_probs=193.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--------chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--------EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 807 (1029)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999875 68999999987542 122345889999999999999999999997665
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc---EEEEccCC
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV---ACLSDFGI 884 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~---~kl~Dfg~ 884 (1029)
.++||||+++++|.+++. ....+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 799999999999999885 4557899999999999999999999 678999999999999987654 99999999
Q ss_pred ceecCCCCCceeccccCCccccCccCC-------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhh
Q 036879 885 SKLLGDETSMTQTQTLATIGYMAPEWK-------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKI 957 (1029)
Q Consensus 885 a~~~~~~~~~~~~~~~gt~~y~aPE~~-------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 957 (1029)
+....... ......||+.|+|||++ ++.++|||||||++|||++|+.||........ +...+..
T Consensus 164 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~------ 234 (322)
T 2ycf_A 164 SKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITS------ 234 (322)
T ss_dssp CEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHH------
T ss_pred ceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHh------
Confidence 98765432 12235689999999973 56789999999999999999999975322111 1110000
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH
Q 036879 958 INVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT 1006 (1029)
Q Consensus 958 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1006 (1029)
............++..+.+++.+||+.||++|||+.|+++
T Consensus 235 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 ---------GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ---------TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---------CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000001112335678899999999999999999999986
No 232
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.6e-37 Score=333.37 Aligned_cols=245 Identities=25% Similarity=0.389 Sum_probs=192.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467999999999999999999986 79999999997543 2235678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCC
Q 036879 812 VLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDE 891 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 891 (1029)
||||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999998654 45899999999999999999999 667999999999999999999999999999876443
Q ss_pred CCceeccccCCccccCccCCC-----CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 892 TSMTQTQTLATIGYMAPEWKL-----SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 892 ~~~~~~~~~gt~~y~aPE~~~-----~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.. .....+++.|+|||... +.++||||+|+++|||++|+.||....... .. ..+....
T Consensus 165 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~---------~~~~~~~- 227 (276)
T 2h6d_A 165 EF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-----LF---------KKIRGGV- 227 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH---------HHHHHCC-
T ss_pred cc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HH---------HHhhcCc-
Confidence 22 22346899999999853 457999999999999999999996531110 00 0000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..++..+.+++.+|++.||++|||++|++++
T Consensus 228 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 ------FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00112345678999999999999999999999985
No 233
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.9e-37 Score=353.90 Aligned_cols=245 Identities=17% Similarity=0.219 Sum_probs=189.1
Q ss_pred hCCCCCCceeccCcceEEEEEEe-cCCcEEEEEEeecc---cchhhHHHHHHHH---HHhcCCCCceEEEE-------EE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-SDGMQIAVKVFNLE---LEGTLRSFDAECE---ILGSIRHRNLVKII-------ST 802 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 802 (1029)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++ ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 47999999999743 2345678899994 55556899999998 66
Q ss_pred EecCC-----------------eEEEEEeccCCCCHHHHHhcCCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 036879 803 CSSDH-----------------FKALVLEYMPNGSLENWMYNKNR------SFDILQRLNMVIDVASALEYLHYDHPTPI 859 (1029)
Q Consensus 803 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~Lh~~~~~gi 859 (1029)
+...+ ..++||||+ +|+|.+++..... .+++..+..++.||+.||+||| +.||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 65553 278999999 6899999965322 2335788889999999999999 6789
Q ss_pred EEcCCCCCCEEECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCC---------------CCCCcchhHHHHH
Q 036879 860 IHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK---------------LSRKGDVYSYGII 924 (1029)
Q Consensus 860 vH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~---------------~~~~~DvwSlGvi 924 (1029)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++ ++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2233457 999999983 5678999999999
Q ss_pred HHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHH
Q 036879 925 LMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEA 1004 (1029)
Q Consensus 925 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ev 1004 (1029)
+|||++|+.||........ ...+ . .. ...++..+.+++.+||+.||++|||+.|+
T Consensus 303 l~elltg~~Pf~~~~~~~~--~~~~-----------~-----~~-------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG--SEWI-----------F-----RS-------CKNIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHHHHSSCCC------CC--SGGG-----------G-----SS-------CCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHHHHCCCCCcccccccc--hhhh-----------h-----hh-------ccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 9999999999965321111 0000 0 00 01235678999999999999999999999
Q ss_pred HH--HHHHhHHhh
Q 036879 1005 LT--KLLKIRNTL 1015 (1029)
Q Consensus 1005 l~--~L~~i~~~~ 1015 (1029)
++ .++.+.+..
T Consensus 358 l~hp~f~~~~~~~ 370 (377)
T 3byv_A 358 METPEYEQLRTEL 370 (377)
T ss_dssp HTSHHHHHHHHHH
T ss_pred hhChHHHHHHHHH
Confidence 97 555555443
No 234
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-36 Score=334.28 Aligned_cols=240 Identities=19% Similarity=0.263 Sum_probs=195.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999986 79999999998643 33456788999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC----------------
Q 036879 813 LEYMPNGSLENWMYNK---NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---------------- 873 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---------------- 873 (1029)
|||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999654 256899999999999999999999 678999999999999984
Q ss_pred ---CCcEEEEccCCceecCCCCCceeccccCCccccCccCCC-----CCCcchhHHHHHHHHHhcCCCCCCccccccccc
Q 036879 874 ---SMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKL-----SRKGDVYSYGIILMETFTKKKPTDELFVGEISL 945 (1029)
Q Consensus 874 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 945 (1029)
...+||+|||.+....... ...||+.|+|||++. +.++|||||||++|||++|++|+..... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~ 237 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----W 237 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----H
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----H
Confidence 4489999999998765432 234899999999843 3489999999999999999987643210 0
Q ss_pred chhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 946 KSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 946 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
. ....... ...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 238 ~------------~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 H------------EIRQGRL-------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp H------------HHHTTCC-------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H------------HHHcCCC-------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 0000000 01112346778999999999999999999999875
No 235
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.5e-37 Score=336.55 Aligned_cols=248 Identities=25% Similarity=0.311 Sum_probs=186.0
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
..++|++.+.||+|+||+||+|+.. +|+.||+|+++.... ...+.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3567899999999999999999974 799999999976532 2233455566668889999999999999999999999
Q ss_pred EeccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 813 LEYMPNGSLENWMYN---KNRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
|||++ |+|.+++.. ....+++..+..++.|++.|++||| ++ ||+||||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 588777654 4667999999999999999999999 55 7999999999999999999999999999876
Q ss_pred CCCCCceeccccCCccccCccCC--------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK--------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
..... .....||+.|+|||++ ++.++||||+||++|||++|+.||.........+.. .
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------------~ 226 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ------------V 226 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH------------H
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH------------H
Confidence 44322 2234689999999984 456899999999999999999999753211111111 1
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........ ....++..+.+++.+||+.||++|||+.|++++
T Consensus 227 ~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 227 VEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HHSCCCCC------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hccCCCCc------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 11000000 012346678999999999999999999999984
No 236
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.5e-37 Score=338.87 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=194.4
Q ss_pred hCCCCCCceeccCcceEEEEEEec--CCc--EEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS--DGM--QIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~--~~~--~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 809 (1029)
.++|++.+.||+|+||+||+|++. +++ .||||+++... ....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457889999999999999999853 333 68999987542 344678899999999999999999999998765 7
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876677999999999999999999999 6789999999999999999999999999998775
Q ss_pred CCCCc--eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhh
Q 036879 890 DETSM--TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVD 962 (1029)
Q Consensus 890 ~~~~~--~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 962 (1029)
..... ......+++.|+|||.. ++.++||||||+++|||++ |+.||......+. .. ....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~--------~~~~ 239 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-----LH--------KIDK 239 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----HH--------HHHT
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH-----HH--------HHHc
Confidence 43322 12234578889999984 5678999999999999999 9999975321110 00 0000
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHH
Q 036879 963 INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRN 1013 (1029)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~ 1013 (1029)
. ......+..++..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 240 ~------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 E------GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp S------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred c------CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 0 00011122456789999999999999999999999999988764
No 237
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.7e-36 Score=334.54 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=200.8
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---------chhhHHHHHHHHHHhcCC-CCceEEEEEEEe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---------EGTLRSFDAECEILGSIR-HRNLVKIISTCS 804 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 804 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999976 78999999997543 122456889999999995 999999999999
Q ss_pred cCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCC
Q 036879 805 SDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGI 884 (1029)
Q Consensus 805 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~ 884 (1029)
..+..++||||+++++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999865 356899999999999999999999 77899999999999999999999999999
Q ss_pred ceecCCCCCceeccccCCccccCccCC----------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc
Q 036879 885 SKLLGDETSMTQTQTLATIGYMAPEWK----------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 885 a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
+........ .....+++.|+|||++ ++.++||||||+++|||++|+.||....... ...
T Consensus 171 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~------- 239 (298)
T 1phk_A 171 SCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--MLR------- 239 (298)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH-------
T ss_pred hhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--HHH-------
Confidence 987654322 2335689999999973 5678999999999999999999986531110 000
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 955 GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 955 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
....... ....+....++..+.+++.+||+.||++|||+.|++++
T Consensus 240 ----~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 ----MIMSGNY----QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp ----HHHHTCC----CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ----HHhcCCc----ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0000000 00001112356779999999999999999999999873
No 238
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-36 Score=369.56 Aligned_cols=256 Identities=21% Similarity=0.364 Sum_probs=203.6
Q ss_pred HhCCCCCCceeccCcceEEEEEEec----CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS----DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKA 810 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 810 (1029)
..++|++.+.||+|+||.||+|++. .+..||||.++... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 3467889999999999999999874 25679999987543 3345679999999999999999999999854 5679
Q ss_pred EEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCC
Q 036879 811 LVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGD 890 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 890 (1029)
+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999877778999999999999999999999 67899999999999999999999999999987655
Q ss_pred CCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 891 ETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 891 ~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
..........+|+.|+|||++ ++.++|||||||++|||++ |+.||.+....+. .. .....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~~-----------~i~~~-- 608 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IG-----------RIENG-- 608 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HH-----------HHHHT--
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--HH-----------HHHcC--
Confidence 443333445678899999983 6778999999999999997 9999875321110 00 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
.....+..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 609 -----~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 609 -----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 001112345678999999999999999999999999999987643
No 239
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.7e-37 Score=341.81 Aligned_cols=257 Identities=20% Similarity=0.266 Sum_probs=200.5
Q ss_pred CHHHHHHHhCCCCCC-ceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcC-CCCceEEEEEEE
Q 036879 729 SYQELFRATDGFSEN-NLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSI-RHRNLVKIISTC 803 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 803 (1029)
.+.......++|.+. +.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.+ +||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 334444556677777 88999999999999876 69999999997653 23356789999999999 569999999999
Q ss_pred ecCCeEEEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEE
Q 036879 804 SSDHFKALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACL 879 (1029)
Q Consensus 804 ~~~~~~~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl 879 (1029)
...+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEE
Confidence 9999999999999999999988543 457999999999999999999999 778999999999999997 789999
Q ss_pred EccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 880 SDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
+|||+++....... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+.. .
T Consensus 176 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~--------- 243 (327)
T 3lm5_A 176 VDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY-L--------- 243 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-H---------
T ss_pred eeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-H---------
Confidence 99999987654322 2335699999999984 577899999999999999999999653211110 0
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...... ..........++..+.+++.+||+.||++|||++|++++
T Consensus 244 ---~i~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 244 ---NISQVN----VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ---HHHHTC----CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---HHHhcc----cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000000 000011112346678999999999999999999999875
No 240
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.9e-37 Score=343.24 Aligned_cols=248 Identities=25% Similarity=0.337 Sum_probs=196.2
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHH-HhcCCCCceEEEEEEEecCCeEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEI-LGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
..++|++.+.||+|+||+||+|+.. +|+.||||+++... ......+..|..+ ++.++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 4567888999999999999999974 79999999997653 2334455556655 7888999999999999999999999
Q ss_pred EeccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 813 LEYMPNGSLENWMYN---KNRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
|||+++ +|.+++.. ....+++..+..++.||+.||+||| ++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888764 5678999999999999999999999 54 7999999999999999999999999999876
Q ss_pred CCCCCceeccccCCccccCccCC--------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK--------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
... .......||+.|+|||++ ++.++|||||||++|||++|+.||.........+. ..
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~------------~~ 270 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK------------QV 270 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH------------HH
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH------------HH
Confidence 432 122335699999999983 46689999999999999999999975321111111 11
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
+....... ....++..+.+++.+||+.||++|||+.|++++
T Consensus 271 ~~~~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 271 VEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHSCCCCC------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hcCCCCCC------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11000000 012346779999999999999999999999984
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=338.13 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=193.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEe-----------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCS----------- 804 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 804 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467899999999999999999986 58999999998776666788999999999999999999999873
Q ss_pred ---cCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC-CCCcEEEE
Q 036879 805 ---SDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN-ESMVACLS 880 (1029)
Q Consensus 805 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~-~~~~~kl~ 880 (1029)
+....++||||++ |+|.+++. ...+++..+..++.|++.||+||| +.||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE--QGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhh--cCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 69999884 356899999999999999999999 67899999999999997 67799999
Q ss_pred ccCCceecCCCCC--ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc-
Q 036879 881 DFGISKLLGDETS--MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS- 952 (1029)
Q Consensus 881 Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~- 952 (1029)
|||+++....... .......++..|+|||.. ++.++|||||||++|||++|+.||......+. ........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 9999986643211 112334578999999963 56689999999999999999999976322111 00000000
Q ss_pred --cchhhhhh-------hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 953 --LHGKIINV-------VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 953 --~~~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..+...+. ..................++.++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000000 00000000001111123457789999999999999999999999875
No 242
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.7e-37 Score=345.99 Aligned_cols=261 Identities=22% Similarity=0.278 Sum_probs=181.2
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecC------
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSD------ 806 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 806 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3578999999999999999999865 78999999987542 33456788999999999999999999998654
Q ss_pred CeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 807 HFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
...++||||+ +++|.+++.. ..+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5679999999 7899998854 56999999999999999999999 7789999999999999999999999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch-----------
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN----------- 950 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~----------- 950 (1029)
..... .....||+.|+|||++ ++.++||||+||++|||++|+.||.+....+. +.....
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHT
T ss_pred ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 65432 2335789999999973 57789999999999999999999976321110 000000
Q ss_pred hccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 951 DSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 951 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..........+..................+..+.+++.+|+..||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000000000000000000011112345678999999999999999999999975
No 243
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-37 Score=337.33 Aligned_cols=249 Identities=22% Similarity=0.339 Sum_probs=198.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEe--cCCeEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCS--SDHFKAL 811 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 811 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999876 78999999997643 334567899999999999999999999874 4678899
Q ss_pred EEeccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEEcCCCCCCEEECCCCcEEEEccC
Q 036879 812 VLEYMPNGSLENWMYNK---NRSFDILQRLNMVIDVASALEYLHYDHPTP-----IIHCDLNPSNILLNESMVACLSDFG 883 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~g-----ivH~Dlk~~Nill~~~~~~kl~Dfg 883 (1029)
||||+++++|.+++... ...+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998653 345899999999999999999999 555 9999999999999999999999999
Q ss_pred CceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhh
Q 036879 884 ISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIIN 959 (1029)
Q Consensus 884 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1029)
.+........ ......|++.|+|||.. ++.++||||||+++|||++|+.||......+ ... .
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~--------~--- 227 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAG--------K--- 227 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH--------H---
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HHH--------H---
Confidence 9986644322 12234689999999984 5678999999999999999999997532110 000 0
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHH
Q 036879 960 VVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLL 1009 (1029)
Q Consensus 960 ~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~ 1009 (1029)
...... ...+..++..+.+++.+||+.||++|||+.|+++++.
T Consensus 228 i~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 228 IREGKF-------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred Hhhccc-------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 000000 0112235677999999999999999999999998764
No 244
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.6e-37 Score=338.25 Aligned_cols=260 Identities=23% Similarity=0.309 Sum_probs=183.8
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEE
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 811 (1029)
....++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 345678999999999999999999865 78999999987543 3345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCC
Q 036879 812 VLEYMPNGSLENWMYN-------KNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGI 884 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~ 884 (1029)
||||+++++|.+++.. ....+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999864 3456899999999999999999999 67899999999999999999999999999
Q ss_pred ceecCCCCC----ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 885 SKLLGDETS----MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 885 a~~~~~~~~----~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
+........ .......||+.|+|||+. ++.++|||||||++|||++|+.||........... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-----~~~~ 242 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-----TLQN 242 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-----HHTS
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-----Hhcc
Confidence 876543211 112234689999999973 68899999999999999999999976322111000 0000
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.... . ............++..+.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~-----~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 243 DPPS-----L-ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SCCC-----T-TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCc-----c-ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000 0 00000000112245678999999999999999999999974
No 245
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.5e-36 Score=341.85 Aligned_cols=265 Identities=20% Similarity=0.278 Sum_probs=199.6
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecC-----Ce
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSD-----HF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 808 (1029)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999876 78899999997543 33456789999999999999999999999654 46
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||++ ++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 105 ~~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999996 599998854 45899999999999999999999 778999999999999999999999999999876
Q ss_pred CCCCCce--eccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch---hccchhhh
Q 036879 889 GDETSMT--QTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN---DSLHGKII 958 (1029)
Q Consensus 889 ~~~~~~~--~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~ 958 (1029)
....... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+. +..... ....+.+.
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHH
Confidence 5332211 2335799999999973 67889999999999999999999976322111 111000 00000000
Q ss_pred hhhh--------hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 959 NVVD--------INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 959 ~~~d--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+ ................++..+.+++.+|++.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 000000000111112346778999999999999999999999974
No 246
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.2e-36 Score=343.75 Aligned_cols=262 Identities=21% Similarity=0.260 Sum_probs=200.8
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchh-----------------hHHHHHHHHHHhcCCCCceEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGT-----------------LRSFDAECEILGSIRHRNLVKI 799 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 799 (1029)
.++|++.+.||+|+||.||+|+. +|+.||||.+....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 99999999997543221 1789999999999999999999
Q ss_pred EEEEecCCeEEEEEeccCCCCHHHH------HhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEcCCCCCCEEE
Q 036879 800 ISTCSSDHFKALVLEYMPNGSLENW------MYNK-NRSFDILQRLNMVIDVASALEYLHYDHP-TPIIHCDLNPSNILL 871 (1029)
Q Consensus 800 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-~givH~Dlk~~Nill 871 (1029)
++++.+.+..++||||+++++|.++ +... ...+++..+..++.|++.|++||| + .||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5432 567999999999999999999999 5 789999999999999
Q ss_pred CCCCcEEEEccCCceecCCCCCceeccccCCccccCccCCCCC------CcchhHHHHHHHHHhcCCCCCCccccccccc
Q 036879 872 NESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKLSR------KGDVYSYGIILMETFTKKKPTDELFVGEISL 945 (1029)
Q Consensus 872 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 945 (1029)
+.++.+||+|||.+...... ......|++.|+|||+..+. ++||||+||++|||++|+.||........ .
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE-L 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-H
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-H
Confidence 99999999999999876443 33445789999999985432 79999999999999999999975422111 1
Q ss_pred chhchhccchhhhhhhhhhhhh-hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 946 KSRVNDSLHGKIINVVDINLLQ-KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 946 ~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...+..... .+.......... ...........++..+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 110000000 000000000000 0000011113456789999999999999999999999973
No 247
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-36 Score=342.57 Aligned_cols=269 Identities=23% Similarity=0.309 Sum_probs=196.8
Q ss_pred HHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec-------
Q 036879 734 FRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS------- 805 (1029)
Q Consensus 734 ~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 805 (1029)
....++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999874 79999999987543 223479999999999999999999843
Q ss_pred -------------------------------CCeEEEEEeccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHH
Q 036879 806 -------------------------------DHFKALVLEYMPNGSLENWMY---NKNRSFDILQRLNMVIDVASALEYL 851 (1029)
Q Consensus 806 -------------------------------~~~~~lV~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~L 851 (1029)
....++||||++ |+|.+++. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334789999997 58777765 3456799999999999999999999
Q ss_pred HhcCCCCcEEcCCCCCCEEEC-CCCcEEEEccCCceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHH
Q 036879 852 HYDHPTPIIHCDLNPSNILLN-ESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIIL 925 (1029)
Q Consensus 852 h~~~~~givH~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil 925 (1029)
| +.||+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||++ ++.++||||+||++
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9 88899999999999998 689999999999987654332 2345689999999973 57789999999999
Q ss_pred HHHhcCCCCCCcccccccccchhchh---ccchhhhhhh----hhhh--hhhhhhhhHHHHHHHHHHHHHHHHccccccc
Q 036879 926 METFTKKKPTDELFVGEISLKSRVND---SLHGKIINVV----DINL--LQKEDAYLTAKEQCVSSVLSLAMQCTRESAE 996 (1029)
Q Consensus 926 ~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~----d~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 996 (1029)
|||++|+.||.+....+. +...+.. ...+.+..+. +... ..........+..++..+.+++.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQ-LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999976322111 1111100 0000000000 0000 0000001112233567799999999999999
Q ss_pred CCCCHHHHHHH--HHHhHH
Q 036879 997 ERINIKEALTK--LLKIRN 1013 (1029)
Q Consensus 997 ~Rpt~~evl~~--L~~i~~ 1013 (1029)
+|||+.|++++ ++.+++
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 99999999963 455544
No 248
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=333.93 Aligned_cols=247 Identities=21% Similarity=0.304 Sum_probs=195.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc----chhhHHHHHHHHHHhcCCCCceEEEEEEE--ecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL----EGTLRSFDAECEILGSIRHRNLVKIISTC--SSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 809 (1029)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 578999999999999999999975 78999999997643 23456799999999999999999999998 445678
Q ss_pred EEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 810 ALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
++||||++++ +.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77776543 457999999999999999999999 678999999999999999999999999999876
Q ss_pred CCC-CCceeccccCCccccCccCCC------CCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 889 GDE-TSMTQTQTLATIGYMAPEWKL------SRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 889 ~~~-~~~~~~~~~gt~~y~aPE~~~------~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
... .........|++.|+|||+.. +.++||||+||++|||++|+.||...... ... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~---------~~i 225 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-----KLF---------ENI 225 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHH---------HHH
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-----HHH---------HHH
Confidence 432 222233456899999999842 45799999999999999999999753110 000 000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
... ....+..++..+.+++.+||+.||++|||++|++++-
T Consensus 226 ~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 226 GKG-------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp HHC-------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred hcC-------CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 000 0011223566789999999999999999999999863
No 249
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.5e-37 Score=350.15 Aligned_cols=258 Identities=12% Similarity=0.101 Sum_probs=182.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc---hhhHHHHHHHHHHhcC--CCCceEEEE-------EEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE---GTLRSFDAECEILGSI--RHRNLVKII-------STC 803 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 803 (1029)
...|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999975 789999999987542 3355677885544444 699988855 444
Q ss_pred ecC-----------------CeEEEEEeccCCCCHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCcE
Q 036879 804 SSD-----------------HFKALVLEYMPNGSLENWMYNKNRSFDILQR------LNMVIDVASALEYLHYDHPTPII 860 (1029)
Q Consensus 804 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~Lh~~~~~giv 860 (1029)
... ...++||||++ |+|.+++......+++..+ ..++.||+.||+||| ++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 332 33799999998 8999999765555555666 778899999999999 77899
Q ss_pred EcCCCCCCEEECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCC
Q 036879 861 HCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKP 934 (1029)
Q Consensus 861 H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p 934 (1029)
||||||+||+++.++.+||+|||+|+..... .....+|+.|+|||++ ++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999876432 1134577999999984 46689999999999999999999
Q ss_pred CCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH--HHHHhH
Q 036879 935 TDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT--KLLKIR 1012 (1029)
Q Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~--~L~~i~ 1012 (1029)
|.................. ... ..........++..+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 293 f~~~~~~~~~~~~~~~~~~------~~~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRV------PGT------DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTS------CCC------CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCCcCcccccchhhhhhhh------ccc------cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 9875332211111000000 000 00000011234677899999999999999999999986 344444
Q ss_pred Hh
Q 036879 1013 NT 1014 (1029)
Q Consensus 1013 ~~ 1014 (1029)
..
T Consensus 361 ~~ 362 (371)
T 3q60_A 361 NE 362 (371)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 250
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-37 Score=342.82 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=196.3
Q ss_pred HHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEec----
Q 036879 732 ELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSS---- 805 (1029)
Q Consensus 732 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 805 (1029)
++....++|++.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 33446788999999999999999999975 78999999987543 3446788999999999 89999999999976
Q ss_pred --CCeEEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEcc
Q 036879 806 --DHFKALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDF 882 (1029)
Q Consensus 806 --~~~~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Df 882 (1029)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeC
Confidence 467899999999999999997643 56899999999999999999999 678999999999999999999999999
Q ss_pred CCceecCCCCCceeccccCCccccCccCC---------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc
Q 036879 883 GISKLLGDETSMTQTQTLATIGYMAPEWK---------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL 953 (1029)
Q Consensus 883 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~---------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 953 (1029)
|++........ ......|++.|+|||++ ++.++|||||||++|||++|+.||........ ...
T Consensus 174 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~-- 245 (326)
T 2x7f_A 174 GVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFL-- 245 (326)
T ss_dssp TTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----HHH--
T ss_pred cCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-----HHH--
Confidence 99986643221 22335689999999974 46789999999999999999999965321100 000
Q ss_pred chhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 954 HGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 954 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
+........ ....++..+.+++.+||..||++|||++|++++
T Consensus 246 ---~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 ---IPRNPAPRL---------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ---HHHSCCCCC---------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---hhcCccccC---------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 012245678999999999999999999999974
No 251
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.4e-36 Score=339.80 Aligned_cols=262 Identities=19% Similarity=0.225 Sum_probs=189.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCC------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDH------ 807 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 807 (1029)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 467999999999999999999875 78999999997642 334567889999999999999999999997654
Q ss_pred eEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 808 FKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 808 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..++||||++ ++|.+++. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 7899999996 57888874 34889999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh----------cc
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND----------SL 953 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----------~~ 953 (1029)
..... ......||+.|+|||++ ++.++||||+||++|||++|+.||.+....+. +...+.. ..
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTS
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHh
Confidence 64322 22345789999999984 67899999999999999999999976322110 0000000 00
Q ss_pred chhhhhhhhhhh-----------hhh-hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 954 HGKIINVVDINL-----------LQK-EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 954 ~~~~~~~~d~~~-----------~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
...+........ ... ...........+..+.+++.+|+..||++|||++|++++-
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000000000 000 0000112234577899999999999999999999999853
No 252
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.8e-36 Score=369.03 Aligned_cols=246 Identities=20% Similarity=0.272 Sum_probs=200.7
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 809 (1029)
...++|++.+.||+|+||+||+|+.. +++.||||++++.. ....+.+..|.+++..+ +||+|+++++++++.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 35678999999999999999999976 68899999998642 33456788899999988 799999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecC
Q 036879 810 ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLG 889 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 889 (1029)
|+||||+++|+|.+++... ..+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999999654 46999999999999999999999 7789999999999999999999999999998643
Q ss_pred CCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
.... ......||+.|+|||++ ++.++|||||||++|||++|+.||......+. . ..+....
T Consensus 494 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-----~--------~~i~~~~- 558 (674)
T 3pfq_A 494 WDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-----F--------QSIMEHN- 558 (674)
T ss_dssp CTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----H--------HHHHSSC-
T ss_pred cCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-----H--------HHHHhCC-
Confidence 3322 23346799999999984 67899999999999999999999976321110 0 0011000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH-----HHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI-----KEALT 1006 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~-----~evl~ 1006 (1029)
...+...+.++.+++.+||+.||++||++ +|+++
T Consensus 559 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 -------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11123456789999999999999999987 77765
No 253
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.2e-37 Score=348.42 Aligned_cols=262 Identities=24% Similarity=0.316 Sum_probs=200.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467999999999999999999976 78999999998653 3345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCc
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSM 894 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 894 (1029)
|+++++|.+++... ..+++..+..++.|++.|++|||+. .||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999998653 4689999999999999999999942 27999999999999999999999999999755321
Q ss_pred eeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc----------------
Q 036879 895 TQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH---------------- 954 (1029)
Q Consensus 895 ~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---------------- 954 (1029)
......||+.|+|||++ ++.++||||+||++|||++|+.||......+... .......
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL--MFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH--HHC--------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhcccccccCCCCCCCcccCCCc
Confidence 12235689999999984 5668999999999999999999997532221100 0000000
Q ss_pred -----------hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 955 -----------GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 955 -----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
....+..+....... .......++.++.+++.+||+.||++|||++|++++-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000011111000000 0000112466799999999999999999999999853
No 254
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.8e-36 Score=346.33 Aligned_cols=262 Identities=19% Similarity=0.232 Sum_probs=196.6
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC--------CCceEEEEEEEe---
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR--------HRNLVKIISTCS--- 804 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 804 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 478999999999999999999865 7899999999754 334567889999999985 788999999987
Q ss_pred -cCCeEEEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEECCCC------
Q 036879 805 -SDHFKALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLNESM------ 875 (1029)
Q Consensus 805 -~~~~~~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~~~~------ 875 (1029)
.....++||||+ ++++.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 566789999999 56666666544 467999999999999999999999 66 899999999999999775
Q ss_pred -------------------------------------------cEEEEccCCceecCCCCCceeccccCCccccCccCC-
Q 036879 876 -------------------------------------------VACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK- 911 (1029)
Q Consensus 876 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~- 911 (1029)
.+||+|||.|...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 8999999999876432 2335689999999984
Q ss_pred ---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccc----hhchhccchhhhhhh----------h------------
Q 036879 912 ---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLK----SRVNDSLHGKIINVV----------D------------ 962 (1029)
Q Consensus 912 ---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~----------d------------ 962 (1029)
++.++|||||||++|||++|+.||........... ..............+ .
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 67899999999999999999999975332211000 000000000000000 0
Q ss_pred -hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 963 -INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 963 -~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.............+...+..+.+++.+||+.||++|||++|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000000111234567889999999999999999999999874
No 255
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.2e-36 Score=334.98 Aligned_cols=270 Identities=21% Similarity=0.307 Sum_probs=192.1
Q ss_pred CchhHHHHHHHHHHhccCCCCCcccCCC----CCCCCCCceeeEEEcC--------CCCceEEEecccccccccCCccCC
Q 036879 2 NVGRDQSALLALKAHVTNDPLNVLASNW----STNTSVCNWFGVTCSP--------RHRRVTALNLAYMGLLGTIPPELG 69 (1029)
Q Consensus 2 ~~~~~~~al~~~~~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~~~~p~~~~ 69 (1029)
.+..|++||++||+++..||.+++++ | ....++|.|.||+|.. ...+|+.|+|+++++. .+|+.++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~-w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSA-WRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHH-HHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhh-hcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 56789999999999998889999988 8 5678899999999952 3467888899888887 8888888
Q ss_pred CCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccC------
Q 036879 70 NLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICN------ 143 (1029)
Q Consensus 70 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------ 143 (1029)
++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~--~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR--ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC--CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc--cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 8888888888888888 88888888888888888888888 56888888888888888888888788877654
Q ss_pred ---ccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCc
Q 036879 144 ---ISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPS 220 (1029)
Q Consensus 144 ---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~ 220 (1029)
+++|++|+|++|+++ .+|..+.++++|++|++++|++++ +|.
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~----------------------------------l~~ 223 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA----------------------------------LGP 223 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC----------------------------------CCG
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc----------------------------------Cch
Confidence 667777777777776 666666666666666666665542 233
Q ss_pred ccccccccceEEcccccccCCCCccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccC
Q 036879 221 TLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTA 300 (1029)
Q Consensus 221 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 300 (1029)
.+..+++|++|+|++|++.+.+|..|+++++|+ +|+|++|.+.+.+|..+.++++|++|+|++
T Consensus 224 ~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~-----------------~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 286 (328)
T 4fcg_A 224 AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK-----------------RLILKDCSNLLTLPLDIHRLTQLEKLDLRG 286 (328)
T ss_dssp GGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC-----------------EEECTTCTTCCBCCTTGGGCTTCCEEECTT
T ss_pred hhccCCCCCEEECcCCcchhhhHHHhcCCCCCC-----------------EEECCCCCchhhcchhhhcCCCCCEEeCCC
Confidence 455555566666666665555555555444333 444555555555555555555555555555
Q ss_pred cccCCCCCchhhhcccccceEeecCcccC
Q 036879 301 NNLLGNLPSNIGHSLPNLQQLILGGNRLT 329 (1029)
Q Consensus 301 N~l~~~lp~~~~~~l~~L~~L~L~~N~l~ 329 (1029)
|++.+.+|..+.. +++|+.+++..|.+.
T Consensus 287 n~~~~~iP~~l~~-L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 287 CVNLSRLPSLIAQ-LPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCCCCGGGGG-SCTTCEEECCGGGSC
T ss_pred CCchhhccHHHhh-ccCceEEeCCHHHHH
Confidence 5555555555542 555555555554443
No 256
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.7e-36 Score=331.83 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=189.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec----------
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS---------- 805 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 805 (1029)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457899999999999999999975 7999999999654 3445778999999999999999999998854
Q ss_pred ---CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEcc
Q 036879 806 ---DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDF 882 (1029)
Q Consensus 806 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Df 882 (1029)
....++||||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45678999999999999999877777889999999999999999999 677999999999999999999999999
Q ss_pred CCceecCCCC-------------CceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccc
Q 036879 883 GISKLLGDET-------------SMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEIS 944 (1029)
Q Consensus 883 g~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 944 (1029)
|.+....... ........|++.|+|||++ ++.++||||+||++|||++ ||........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~- 236 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN- 236 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH-
Confidence 9998654321 1112335689999999973 5678999999999999998 5532111000
Q ss_pred cchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 945 LKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
... .+.. ..... ....+..++..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~--------~~~~-~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ILK--------KLRS-VSIEF------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHH--------HHHS-TTCCC------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHH--------hccc-ccccc------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 000 0000 00000 001112345668999999999999999999999974
No 257
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.7e-36 Score=331.29 Aligned_cols=264 Identities=24% Similarity=0.335 Sum_probs=197.8
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc--hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEEe
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE--GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 814 (1029)
++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999976 789999999875532 234678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 815 YMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
|++ ++|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999987653 56899999999999999999999 67899999999999999999999999999987643322
Q ss_pred ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc---chhhhhhh---h
Q 036879 894 MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL---HGKIINVV---D 962 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~---d 962 (1029)
......+|+.|+|||.. ++.++|||||||++|||++|+.||......+. +........ ...+.... +
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCchhhhhHhhcCcc
Confidence 22335689999999973 57789999999999999999999976322111 000000000 00000000 0
Q ss_pred --hhhhh-hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 963 --INLLQ-KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 963 --~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..... ...........++.++.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 0000011112346778999999999999999999999874
No 258
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.2e-36 Score=338.67 Aligned_cols=265 Identities=23% Similarity=0.249 Sum_probs=197.2
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecC-----Ce
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSD-----HF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 808 (1029)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3568999999999999999999976 78999999997543 33456788999999999999999999988654 67
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||||++ ++|.+++.. ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 89 ~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999996 699998865 46899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCc---------eeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch----
Q 036879 889 GDETSM---------TQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN---- 950 (1029)
Q Consensus 889 ~~~~~~---------~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---- 950 (1029)
...... ......||+.|+|||++ ++.++||||+||++|||++|+.||........ +.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCC
Confidence 532211 11224689999999963 56689999999999999999999976321110 000000
Q ss_pred --------hccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 951 --------DSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 951 --------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........+...................++.++.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000000000000011122457788999999999999999999999984
No 259
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.5e-36 Score=346.93 Aligned_cols=193 Identities=25% Similarity=0.322 Sum_probs=167.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcC------CCCceEEEEEEEecCCeE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSI------RHRNLVKIISTCSSDHFK 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 809 (1029)
..+|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|+++++.+ .|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 567999999999999999999876 6899999999754 23346677888888777 577999999999999999
Q ss_pred EEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc--EEEEccCCce
Q 036879 810 ALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV--ACLSDFGISK 886 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~--~kl~Dfg~a~ 886 (1029)
++||||+. ++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++. +||+|||+|.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 69999887654 45999999999999999999999 667999999999999999887 9999999997
Q ss_pred ecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcc
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDEL 938 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~ 938 (1029)
..... .....||+.|+|||++ ++.++|||||||++|||++|++||...
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 65432 2235689999999983 688999999999999999999999764
No 260
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6e-36 Score=340.59 Aligned_cols=259 Identities=20% Similarity=0.283 Sum_probs=193.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeE----
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFK---- 809 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 809 (1029)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467889999999999999999875 79999999997643 33356788999999999999999999999876654
Q ss_pred --EEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 810 --ALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 810 --~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
++||||++ ++|.+++ ...+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHT---TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHh---hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 6888876 344899999999999999999999 67899999999999999999999999999986
Q ss_pred cCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch-----------h
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN-----------D 951 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----------~ 951 (1029)
.... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+. +..... .
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTT
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCcHHHHHH
Confidence 5432 2335689999999973 57789999999999999999999976321111 000000 0
Q ss_pred ccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 952 SLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 952 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...........................++..+.+++.+|++.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000000000000000111122346789999999999999999999999975
No 261
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.3e-35 Score=336.43 Aligned_cols=335 Identities=19% Similarity=0.216 Sum_probs=230.3
Q ss_pred CCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCccc
Q 036879 290 ISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDEL 369 (1029)
Q Consensus 290 l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~ 369 (1029)
+++++.|++++|.+. .+|..++..+++|++|+|++|++++..+..|..+++|++|++++|.+.+..|..+
T Consensus 44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~--------- 113 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVF--------- 113 (390)
T ss_dssp GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTT---------
T ss_pred cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHh---------
Confidence 455666666666653 5555555556666666666666665555566666666666666666655444332
Q ss_pred ccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccccccccc
Q 036879 370 GFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIG 449 (1029)
Q Consensus 370 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 449 (1029)
..+++|++|++++|+++...+..+..+.+ |++|++++|++++..|..|.++++|++|+|++|++++. .+.
T Consensus 114 ------~~l~~L~~L~L~~n~l~~l~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~ 183 (390)
T 3o6n_A 114 ------QNVPLLTVLVLERNDLSSLPRGIFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLS 183 (390)
T ss_dssp ------TTCTTCCEEECCSSCCCCCCTTTTTTCTT-CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGG
T ss_pred ------cCCCCCCEEECCCCccCcCCHHHhcCCCC-CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccc
Confidence 35566666666666666433333455554 67777777777766666777777777777777777743 245
Q ss_pred CCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEE
Q 036879 450 RLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNV 529 (1029)
Q Consensus 450 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 529 (1029)
.+++|+.|++++|.+++. ...++|++|++++|.+...... ..++|+.|++++|++++. ..+..+++|+.|
T Consensus 184 ~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 253 (390)
T 3o6n_A 184 LIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEV 253 (390)
T ss_dssp GCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cccccceeeccccccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEE
Confidence 567777777777777532 3345677777777777644322 236788888888888754 567788888888
Q ss_pred EccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc
Q 036879 530 NLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 530 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
+|++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 254 DLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp ECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred ECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc
Confidence 888888887778888888888888888888874 5666677888888888888888 56667778888888888888888
Q ss_pred CcCchhhhcccccceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCCC
Q 036879 610 GEIPNSLKALSLLKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 610 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.. + +..+++|+.|++++|++++.... ..+..+....+.+++..|+++
T Consensus 332 ~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 332 TL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred ee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 54 3 66778888888888888874321 234455566677888888765
No 262
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=344.39 Aligned_cols=195 Identities=23% Similarity=0.321 Sum_probs=150.2
Q ss_pred CCCCC-CceeccCcceEEEEEEec---CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEe--cCCeEEE
Q 036879 738 DGFSE-NNLLGKGSFGSVYKGTLS---DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCS--SDHFKAL 811 (1029)
Q Consensus 738 ~~~~~-~~~lg~G~fg~V~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 811 (1029)
+.|++ .++||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34555 458999999999999965 57899999987542 2356889999999999999999999994 4778999
Q ss_pred EEeccCCCCHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE----CCCCcEEE
Q 036879 812 VLEYMPNGSLENWMYNK--------NRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL----NESMVACL 879 (1029)
Q Consensus 812 V~E~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill----~~~~~~kl 879 (1029)
||||++ ++|.+++... ...+++..+..++.||+.||+||| +.||+||||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 5888877422 224899999999999999999999 6779999999999999 77899999
Q ss_pred EccCCceecCCCCC--ceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcc
Q 036879 880 SDFGISKLLGDETS--MTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDEL 938 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~ 938 (1029)
+|||+|+.+..... .......||+.|+|||++ ++.++||||+||++|||++|++||...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999987643211 222345789999999974 566899999999999999999999753
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.6e-36 Score=327.41 Aligned_cols=249 Identities=26% Similarity=0.316 Sum_probs=199.9
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999976 78999999987653 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCceecC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGISKLLG 889 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a~~~~ 889 (1029)
|||+++++|.+++... ..+++..+..++.|++.|++||| +.||+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999988543 46899999999999999999999 678999999999999975 4479999999998664
Q ss_pred CCCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhh
Q 036879 890 DETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLL 966 (1029)
Q Consensus 890 ~~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 966 (1029)
.... .....+++.|+|||.+ ++.++||||+|+++|+|++|+.||......+ ....+ ...
T Consensus 176 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~-----------~~~--- 237 (287)
T 2wei_A 176 QNTK--MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRV-----------ETG--- 237 (287)
T ss_dssp CCSS--CSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH-----------HHC---
T ss_pred CCCc--cccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHH-----------HcC---
Confidence 4322 1234588999999984 5778999999999999999999997532111 00000 000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 967 QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 967 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
......+....++..+.+++.+|++.||++|||+.|++++
T Consensus 238 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 238 -KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -CCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000011112346778999999999999999999999984
No 264
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=342.28 Aligned_cols=257 Identities=21% Similarity=0.345 Sum_probs=197.9
Q ss_pred HHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
...++|++.+.||+|+||.||+|+... .||+|+++... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 346789999999999999999998754 59999987543 23345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++......+++..+..++.|++.|++||| +.||+||||||+||+++ ++.+||+|||++.......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999999776668999999999999999999999 67899999999999998 6899999999987553211
Q ss_pred ----CceeccccCCccccCccCC-------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccch
Q 036879 893 ----SMTQTQTLATIGYMAPEWK-------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHG 955 (1029)
Q Consensus 893 ----~~~~~~~~gt~~y~aPE~~-------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 955 (1029)
........|++.|+|||++ ++.++|||||||++|||++|+.||........ ..
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~----- 253 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-----IW----- 253 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-----HH-----
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HH-----
Confidence 1122234588999999984 35679999999999999999999975321111 00
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhhc
Q 036879 956 KIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTLL 1016 (1029)
Q Consensus 956 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~~ 1016 (1029)
........... +..++.++.+++.+||..||++|||+.++++.|+.+.+...
T Consensus 254 ~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 254 QMGTGMKPNLS---------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp HHHTTCCCCCC---------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred HhccCCCCCCC---------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00000000000 01235568999999999999999999999999999887643
No 265
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-35 Score=340.82 Aligned_cols=261 Identities=22% Similarity=0.307 Sum_probs=190.7
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC------eEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH------FKA 810 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 810 (1029)
..+|++.+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346888999999999999999988777799998865432 2347999999999999999999985433 378
Q ss_pred EEEeccCCCCHHHHH--hcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC-CCCcEEEEccCCcee
Q 036879 811 LVLEYMPNGSLENWM--YNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN-ESMVACLSDFGISKL 887 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l--~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~-~~~~~kl~Dfg~a~~ 887 (1029)
+||||++++.+.... ......+++..+..++.|+++||+||| ++||+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999765433322 234567999999999999999999999 77899999999999999 899999999999987
Q ss_pred cCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch---hccchhhhh
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN---DSLHGKIIN 959 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~ 959 (1029)
...... .....||+.|+|||++ ++.++||||+||++|||++|+.||.+....+. +...+. ....+.+..
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHh
Confidence 644332 2345689999999973 57789999999999999999999976321111 111100 000000000
Q ss_pred h----hhhhhhh--hhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 960 V----VDINLLQ--KEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 960 ~----~d~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
+ ....... ........+..++.++.+++.+||+.||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0 0000000 0000001112256789999999999999999999999985
No 266
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.4e-36 Score=334.15 Aligned_cols=250 Identities=25% Similarity=0.315 Sum_probs=178.8
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc-hhhHHHHHHHH-HHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-GTLRSFDAECE-ILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... .....+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999975 799999999976532 33445556665 778889999999999999999999999
Q ss_pred eccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 814 EYMPNGSLENWMYN----KNRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 814 E~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
||+++ +|.+++.. ....+++..+..++.|++.|++||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88877642 3567899999999999999999999 55 7999999999999999999999999999866
Q ss_pred CCCCCceeccccCCccccCccCC--------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK--------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~--------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
..... .....||+.|+|||++ ++.++|||||||++|||++|+.||.........+..... +...
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~-- 248 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK----GDPP-- 248 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCC----SCCC--
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhc----CCCC--
Confidence 43322 2234689999999985 567899999999999999999999753221111111100 0000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.... .....++..+.+++.+||+.||++|||+.|++++
T Consensus 249 ---~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 249 ---QLSN------SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CCCC------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCCC------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000 0011245678999999999999999999999874
No 267
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.1e-35 Score=339.78 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=189.6
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec----C--CeEE
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS----D--HFKA 810 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~--~~~~ 810 (1029)
.+|+..+.||+|+||+||+|++. +|+.||||++.... +...+|+++++.++||||+++++++.. . ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35788899999999999999986 69999999986542 233479999999999999999998843 1 2357
Q ss_pred EEEeccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC-CcEEEEccCCce
Q 036879 811 LVLEYMPNGSLENWMY---NKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES-MVACLSDFGISK 886 (1029)
Q Consensus 811 lV~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~-~~~kl~Dfg~a~ 886 (1029)
+||||+++ ++.+.+. .....+++..+..++.||++||+||| +.||+||||||+||+++.+ +.+||+|||+|+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 6666553 34567999999999999999999999 7889999999999999955 678999999998
Q ss_pred ecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh---ccchhhh
Q 036879 887 LLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND---SLHGKII 958 (1029)
Q Consensus 887 ~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~ 958 (1029)
....... .....||+.|+|||++ ++.++||||+||++|||++|+.||.+....+ .+...+.. ...+.+.
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 7644322 2335789999999973 5678999999999999999999997632111 11111110 0001111
Q ss_pred hhh----hhhhhhh--hhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 959 NVV----DINLLQK--EDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 959 ~~~----d~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.+. +..+... .......+...+.++.+++.+||..||++|||+.|++++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 100 0000000 000000112345779999999999999999999999974
No 268
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.4e-35 Score=331.95 Aligned_cols=270 Identities=21% Similarity=0.255 Sum_probs=187.7
Q ss_pred HHHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEecCC---
Q 036879 732 ELFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSSDH--- 807 (1029)
Q Consensus 732 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 807 (1029)
......++|++.+.||+|+||.||+|+.. +|+.||||++.... .......+|++.++.++||||+++++++...+
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 44567889999999999999999999975 78999999986542 23345677888889999999999999986533
Q ss_pred ----eEEEEEeccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC-CCcEEE
Q 036879 808 ----FKALVLEYMPNGSLENWMY---NKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE-SMVACL 879 (1029)
Q Consensus 808 ----~~~lV~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~-~~~~kl 879 (1029)
..++||||+++ ++.+.+. .....+++..+..++.|++.|++||| .|+.||+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 27899999975 5554443 35567899999999999999999999 33567999999999999996 899999
Q ss_pred EccCCceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhcc-
Q 036879 880 SDFGISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSL- 953 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~- 953 (1029)
+|||+++....... .....||+.|+|||++ ++.++|||||||++|||++|+.||........ +...+....
T Consensus 174 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 250 (360)
T 3e3p_A 174 CDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIVRVLGC 250 (360)
T ss_dssp CCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCC
T ss_pred eeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHHHHcCC
Confidence 99999987654332 2345689999999973 57789999999999999999999976321111 111110000
Q ss_pred -chhhhhhhhh-----hhh-----hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 954 -HGKIINVVDI-----NLL-----QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 954 -~~~~~~~~d~-----~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
........+. ... ............++..+.+++.+||+.||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000000 000 00000000111246789999999999999999999999985
No 269
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.4e-35 Score=331.94 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=197.0
Q ss_pred HhCCCCCCceeccCcceEEEEEEe--cCCcEEEEEEeecccc--hhhHHHHHHHHHHhcC---CCCceEEEEEEEe----
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTL--SDGMQIAVKVFNLELE--GTLRSFDAECEILGSI---RHRNLVKIISTCS---- 804 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~--~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 804 (1029)
..++|++.+.||+|+||.||+|+. .+|+.||+|+++.... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 467899999999999999999997 3688999999875432 2234677788877766 8999999999987
Q ss_pred -cCCeEEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEcc
Q 036879 805 -SDHFKALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDF 882 (1029)
Q Consensus 805 -~~~~~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Df 882 (1029)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999997 69999987654 45899999999999999999999 778999999999999999999999999
Q ss_pred CCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchh---ccch
Q 036879 883 GISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVND---SLHG 955 (1029)
Q Consensus 883 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~ 955 (1029)
|++....... ......|++.|+|||+. ++.++|||||||++|||++|+.||........ +...... ....
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGG
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcc
Confidence 9998654322 22345689999999983 67789999999999999999999976322110 0000000 0000
Q ss_pred hhhhhhh---hhhh-hhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 956 KIINVVD---INLL-QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 956 ~~~~~~d---~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.+..... .... ............++..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 0000 00000011122356778999999999999999999999964
No 270
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.5e-35 Score=330.46 Aligned_cols=259 Identities=20% Similarity=0.290 Sum_probs=197.4
Q ss_pred hCCCCCCceeccCcceEEEEEEe-c-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCC------ceEEEEEEEecCCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTL-S-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHR------NLVKIISTCSSDHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~-~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 808 (1029)
.++|++.+.||+|+||.||+|.. . +++.||||+++.. ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999987 3 6899999998754 33456788999999988665 49999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC--------------
Q 036879 809 KALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE-------------- 873 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~-------------- 873 (1029)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 899999987654 36899999999999999999999 678999999999999987
Q ss_pred -----CCcEEEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccc
Q 036879 874 -----SMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEIS 944 (1029)
Q Consensus 874 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 944 (1029)
++.+||+|||++...... .....||+.|+|||++ ++.++||||+||++|||++|+.||......+.
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH- 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH-
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-
Confidence 678999999999875432 2235689999999983 57789999999999999999999975322111
Q ss_pred cchhchhccc---hhh-h----------------------hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCC
Q 036879 945 LKSRVNDSLH---GKI-I----------------------NVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEER 998 (1029)
Q Consensus 945 ~~~~~~~~~~---~~~-~----------------------~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 998 (1029)
...+..... ..+ . ..+..... ...........++..+.+++.+||+.||++|
T Consensus 243 -~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 243 -LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp -HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred -HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCc-chhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 000000000 000 0 00000000 0000001122457789999999999999999
Q ss_pred CCHHHHHHH
Q 036879 999 INIKEALTK 1007 (1029)
Q Consensus 999 pt~~evl~~ 1007 (1029)
||++|++++
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999875
No 271
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-35 Score=329.63 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=194.6
Q ss_pred HHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeeccc--chhhHHHHHHHHHHhcCC--CCceEEEEEEEecCCe
Q 036879 733 LFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLEL--EGTLRSFDAECEILGSIR--HRNLVKIISTCSSDHF 808 (1029)
Q Consensus 733 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~ 808 (1029)
+....++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 334567799999999999999999998889999999997543 334577899999999997 5999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.++||| +.+++|.+++... ..+++..+..++.|+++||+||| +.||+||||||+||++++ +.+||+|||++...
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999999 5588999999654 56899999999999999999999 678999999999999964 89999999999876
Q ss_pred CCCCCc-eeccccCCccccCccCC---------------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhc
Q 036879 889 GDETSM-TQTQTLATIGYMAPEWK---------------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDS 952 (1029)
Q Consensus 889 ~~~~~~-~~~~~~gt~~y~aPE~~---------------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 952 (1029)
...... ......|++.|+|||.+ ++.++|||||||++|||++|+.||.........
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-------- 248 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-------- 248 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH--------
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH--------
Confidence 443221 22335689999999984 344799999999999999999999653211110
Q ss_pred cchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 953 LHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 953 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
+....+.... ...+..++..+.+++.+||+.||++||+++|++++-
T Consensus 249 ----~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 249 ----LHAIIDPNHE------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp ----HHHHHCTTSC------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ----HHHHHhcccc------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1111111100 011112356789999999999999999999999854
No 272
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.9e-35 Score=331.60 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=172.1
Q ss_pred HhCCCCCCc-eeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCceEEEEEEEec----CCeE
Q 036879 736 ATDGFSENN-LLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNLVKIISTCSS----DHFK 809 (1029)
Q Consensus 736 ~~~~~~~~~-~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 809 (1029)
..++|.+.+ .||+|+||+||+|+.. +|+.||||++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 6999999999999976 79999999986542 222233344677799999999999876 4557
Q ss_pred EEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a 885 (1029)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999997654 46999999999999999999999 678999999999999976 556999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVV 961 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1029)
....... .....+|+.|+|||++ ++.++||||+||++|||++|+.||........... ... .+
T Consensus 179 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~-----~~---- 245 (336)
T 3fhr_A 179 KETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKR-----RI---- 245 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHH-----hh----
Confidence 8664322 2235689999999985 45689999999999999999999975422211000 000 00
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 962 DINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 962 d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
. .............++..+.+++.+||+.||++|||++|++++-
T Consensus 246 ~---~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 246 R---LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred h---ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 0000000011123467789999999999999999999999854
No 273
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=342.00 Aligned_cols=245 Identities=22% Similarity=0.330 Sum_probs=185.9
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEEec
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
..+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +|||||++++++.+....++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 346888899999999997665566899999999865432 3456899999999 899999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC-----CCcEEEEccCCceecCC
Q 036879 816 MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE-----SMVACLSDFGISKLLGD 890 (1029)
Q Consensus 816 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~-----~~~~kl~Dfg~a~~~~~ 890 (1029)
++ |+|.+++........+..+..++.||+.||+||| +.||+||||||+||+++. ...+||+|||+|+....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 95 6999999877666666677899999999999999 677999999999999953 34688999999987653
Q ss_pred CCC--ceeccccCCccccCccCCC-------CCCcchhHHHHHHHHHhc-CCCCCCcccccccccchhchhccchhhhhh
Q 036879 891 ETS--MTQTQTLATIGYMAPEWKL-------SRKGDVYSYGIILMETFT-KKKPTDELFVGEISLKSRVNDSLHGKIINV 960 (1029)
Q Consensus 891 ~~~--~~~~~~~gt~~y~aPE~~~-------~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 960 (1029)
... .......||+.|+|||++. +.++||||+||++|||++ |+.||.......... .
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--------------~ 241 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--------------L 241 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--------------H
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--------------H
Confidence 321 2233457999999999853 447999999999999999 899986432111100 0
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH
Q 036879 961 VDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT 1006 (1029)
Q Consensus 961 ~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1006 (1029)
...... .....+...+..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSL----DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCC----TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCc----cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000000 000011223556889999999999999999999995
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.7e-36 Score=332.60 Aligned_cols=239 Identities=22% Similarity=0.299 Sum_probs=196.3
Q ss_pred HHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch------hhHHHHHHHHHHhcCC--CCceEEEEEEEec
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG------TLRSFDAECEILGSIR--HRNLVKIISTCSS 805 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 805 (1029)
...++|++.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34678999999999999999999865 7899999999765321 2355778999999996 5999999999999
Q ss_pred CCeEEEEEeccCC-CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC-CCCcEEEEccC
Q 036879 806 DHFKALVLEYMPN-GSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN-ESMVACLSDFG 883 (1029)
Q Consensus 806 ~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~-~~~~~kl~Dfg 883 (1029)
.+..++||||+.+ ++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++ .++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 899999865 456899999999999999999999 77899999999999999 78999999999
Q ss_pred CceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhh
Q 036879 884 ISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKII 958 (1029)
Q Consensus 884 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1029)
++....... .....||+.|+|||++ .+.++|||||||++|||++|+.||..... .
T Consensus 196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~---------- 255 (320)
T 3a99_A 196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------I---------- 255 (320)
T ss_dssp TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------H----------
T ss_pred ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------h----------
Confidence 998765432 2235689999999973 35678999999999999999999965210 0
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 959 NVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 959 ~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..... ..+..++.++.+++.+||+.||++|||++|++++
T Consensus 256 --~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 256 --IRGQV--------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --HHCCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --hcccc--------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0011235678999999999999999999999874
No 275
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=334.73 Aligned_cols=259 Identities=20% Similarity=0.275 Sum_probs=191.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe-----
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF----- 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 808 (1029)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467889999999999999999875 79999999997643 2335678899999999999999999999987654
Q ss_pred -EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 809 -KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 809 -~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
.++||||++ ++|.+++. ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 489999996 68887663 35899999999999999999999 67799999999999999999999999999976
Q ss_pred cCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhch-----------h
Q 036879 888 LGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVN-----------D 951 (1029)
Q Consensus 888 ~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----------~ 951 (1029)
.... .....+|+.|+|||++ ++.++||||+||++|||++|+.||......+. +..... .
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHHHHHCBCCHHHHTT
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHH
Confidence 5332 2235689999999973 56789999999999999999999976321110 000000 0
Q ss_pred ccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 952 SLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 952 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
...........................++..+.+++.+|++.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000000000000000011112356789999999999999999999999975
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=332.09 Aligned_cols=241 Identities=24% Similarity=0.347 Sum_probs=188.0
Q ss_pred HHHHhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc------hhhHHHHHHHHHHhcC----CCCceEEEEE
Q 036879 733 LFRATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE------GTLRSFDAECEILGSI----RHRNLVKIIS 801 (1029)
Q Consensus 733 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 801 (1029)
.....++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+++++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999874 789999999975432 1234466789999888 8999999999
Q ss_pred EEecCCeEEEEEec-cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC-CCCcEEE
Q 036879 802 TCSSDHFKALVLEY-MPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN-ESMVACL 879 (1029)
Q Consensus 802 ~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~-~~~~~kl 879 (1029)
++...+..++|||| +.+++|.+++.. ...+++..+..++.|++.||+||| +.||+||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 789999999965 346899999999999999999999 66799999999999999 8999999
Q ss_pred EccCCceecCCCCCceeccccCCccccCccCC-----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccc
Q 036879 880 SDFGISKLLGDETSMTQTQTLATIGYMAPEWK-----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLH 954 (1029)
Q Consensus 880 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 954 (1029)
+|||++....... .....|++.|+|||++ .+.++||||+||++|||++|+.||.....
T Consensus 182 ~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------------- 244 (312)
T 2iwi_A 182 IDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------------- 244 (312)
T ss_dssp CCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------------
T ss_pred EEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------------
Confidence 9999998765432 2335689999999973 23479999999999999999999965210
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 955 GKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 955 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
..... ...+..++..+.+++.+||+.||++|||++|++++
T Consensus 245 -----~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 -----ILEAE--------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----HHHTC--------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----Hhhhc--------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00112345678999999999999999999999984
No 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.1e-35 Score=340.40 Aligned_cols=245 Identities=24% Similarity=0.336 Sum_probs=181.5
Q ss_pred CCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEEeccC
Q 036879 739 GFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVLEYMP 817 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~ 817 (1029)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 345568899999999987766789999999987542 35678899999876 89999999999999999999999995
Q ss_pred CCCHHHHHhcCCCCC------CHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCC-------------CcEE
Q 036879 818 NGSLENWMYNKNRSF------DILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNES-------------MVAC 878 (1029)
Q Consensus 818 ~gsL~~~l~~~~~~~------~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~-------------~~~k 878 (1029)
|+|.+++....... .+..+..++.||+.||+||| +.||+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999996543221 22345789999999999999 6789999999999999754 4899
Q ss_pred EEccCCceecCCCCCc---eeccccCCccccCccCC-----------CCCCcchhHHHHHHHHHhc-CCCCCCccccccc
Q 036879 879 LSDFGISKLLGDETSM---TQTQTLATIGYMAPEWK-----------LSRKGDVYSYGIILMETFT-KKKPTDELFVGEI 943 (1029)
Q Consensus 879 l~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~-----------~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~ 943 (1029)
|+|||+|+........ ......||+.|+|||++ ++.++|||||||++|||++ |+.||......+.
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 9999999877543221 12235699999999974 4668999999999999999 9999975322111
Q ss_pred ccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH
Q 036879 944 SLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT 1006 (1029)
Q Consensus 944 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1006 (1029)
.+. .. ...... ........++.++.+++.+||+.||++|||+.|+++
T Consensus 249 ~i~---~~--------~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NII---RG--------IFSLDE-----MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHH---HT--------CCCCCC-----CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHh---cC--------CCCccc-----ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 000 00 000000 000012345678999999999999999999999986
No 278
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-34 Score=349.95 Aligned_cols=334 Identities=19% Similarity=0.219 Sum_probs=222.3
Q ss_pred CCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccc
Q 036879 291 SSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELG 370 (1029)
Q Consensus 291 ~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~ 370 (1029)
.+++.|++++|.+. .+|..++..+++|++|+|++|.+++..|..|..+++|+.|++++|.+.+..|..+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---------- 119 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVF---------- 119 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTT----------
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHH----------
Confidence 44455555555543 4444444445555555555555555555555555555555555555554443322
Q ss_pred cccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccC
Q 036879 371 FLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGR 450 (1029)
Q Consensus 371 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 450 (1029)
..+++|++|+|++|.+++..+..|..+.+ |++|+|++|.+++..|..|.++++|++|+|++|.+++. + +..
T Consensus 120 -----~~l~~L~~L~L~~n~l~~l~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~ 190 (597)
T 3oja_B 120 -----QNVPLLTVLVLERNDLSSLPRGIFHNTPK-LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSL 190 (597)
T ss_dssp -----TTCTTCCEEECCSSCCCCCCTTTTTTCTT-CCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGG
T ss_pred -----cCCCCCCEEEeeCCCCCCCCHHHhccCCC-CCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhh
Confidence 24555666666666665444444455554 66666666666666666677777777777777777643 2 445
Q ss_pred CCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEE
Q 036879 451 LQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVN 530 (1029)
Q Consensus 451 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 530 (1029)
+++|+.|++++|.+++ +....+|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..+++|+.|+
T Consensus 191 l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~ 260 (597)
T 3oja_B 191 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVD 260 (597)
T ss_dssp CTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEE
T ss_pred hhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEE
Confidence 6667777777776653 233456777777777776443332 2578888888888875 36778888888888
Q ss_pred ccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccC
Q 036879 531 LSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 531 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++
T Consensus 261 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 261 LSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp CCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 88888888888888888888888888888884 5667777888888888888888 577778888889999999998885
Q ss_pred cCchhhhcccccceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCCC
Q 036879 611 EIPNSLKALSLLKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 611 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.. +..+++|+.|++++|+++|.... ..+..+....+.+++..|+.+
T Consensus 339 ~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 339 LK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred cC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 53 56678888899999998875422 234555566678888888874
No 279
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.3e-35 Score=335.51 Aligned_cols=262 Identities=15% Similarity=0.234 Sum_probs=194.5
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-----------CCceEEEEEEEe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-----------HRNLVKIISTCS 804 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 804 (1029)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 467999999999999999999974 7899999998754 234467888999998886 899999999987
Q ss_pred cCC----eEEEEEeccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEEC------
Q 036879 805 SDH----FKALVLEYMPNGSLENWMYNK-NRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLN------ 872 (1029)
Q Consensus 805 ~~~----~~~lV~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~------ 872 (1029)
..+ ..++||||+ +++|.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 644 789999999 89999999764 345999999999999999999999 65 899999999999994
Q ss_pred CCCcEEEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccc-h
Q 036879 873 ESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLK-S 947 (1029)
Q Consensus 873 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~-~ 947 (1029)
..+.+||+|||++...... .....||+.|+|||++ ++.++|||||||++|||++|+.||........... .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4458999999999876432 2234689999999983 67889999999999999999999975322111000 0
Q ss_pred hchhcc--chhhhh-h----------hh-------------hhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCH
Q 036879 948 RVNDSL--HGKIIN-V----------VD-------------INLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINI 1001 (1029)
Q Consensus 948 ~~~~~~--~~~~~~-~----------~d-------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~ 1001 (1029)
...... .+.+.. . .. .............+..++..+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 000000 000000 0 00 000000011112235678889999999999999999999
Q ss_pred HHHHHH
Q 036879 1002 KEALTK 1007 (1029)
Q Consensus 1002 ~evl~~ 1007 (1029)
+|++++
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999985
No 280
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=9.7e-35 Score=332.10 Aligned_cols=196 Identities=28% Similarity=0.377 Sum_probs=167.5
Q ss_pred HhCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CC-----ceEEEEEEEecCCe
Q 036879 736 ATDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HR-----NLVKIISTCSSDHF 808 (1029)
Q Consensus 736 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 808 (1029)
..++|++.+.||+|+||+||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4678999999999999999999876 7889999999754 234566788899888884 54 49999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC--CCCcEEEEccCCc
Q 036879 809 KALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN--ESMVACLSDFGIS 885 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~--~~~~~kl~Dfg~a 885 (1029)
.++||||++ ++|.+++.... ..+++..+..++.|++.||+|||. ++.|||||||||+||+++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 59999987654 568999999999999999999994 246899999999999995 5788999999999
Q ss_pred eecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcc
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDEL 938 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~ 938 (1029)
+..... .....||+.|+|||++ ++.++|||||||++|||++|+.||...
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876442 2235689999999984 678999999999999999999999753
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.9e-35 Score=322.02 Aligned_cols=255 Identities=35% Similarity=0.562 Sum_probs=229.6
Q ss_pred hcceecccccccc--ccccccCCcCcCcEEEecC-ccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEe
Q 036879 406 MDVLYLSACNIKG--SIPSEIGNLNNLTTLHLET-NELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFY 482 (1029)
Q Consensus 406 L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 482 (1029)
++.|++++|++++ .+|..|.++++|++|+|++ |.+.+.+|..|..+++|++|+|++|.+++..+..|..+++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 6777777777777 7788888888888888884 888878888888888888888888888878888888888888888
Q ss_pred cCCCcccCccccccccccccceeeccCccccCCCCCCccCCC-CCcEEEccCCcccCcCCccccccccccEEEccCCcCC
Q 036879 483 SDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLR-DILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLS 561 (1029)
Q Consensus 483 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 561 (1029)
+++|.+++..|..|..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++..|..+..++ |+.|++++|.++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 888888888899999999999999999999988899999988 899999999999988999999987 999999999999
Q ss_pred CCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCCCC
Q 036879 562 GEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHGGP 641 (1029)
Q Consensus 562 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 641 (1029)
+..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|....
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 88999999999999999999999976665 88899999999999999999999999999999999999999999999888
Q ss_pred CCccCcccccCCCCCCCCCCC
Q 036879 642 FTNLSSQSFVGNKGLCGAPEL 662 (1029)
Q Consensus 642 ~~~l~~~~~~~n~~~c~~~~~ 662 (1029)
++++..+.+.+||++||.|..
T Consensus 290 l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTSS
T ss_pred ccccChHHhcCCCCccCCCCC
Confidence 999999999999999998853
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=327.93 Aligned_cols=248 Identities=25% Similarity=0.295 Sum_probs=180.7
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccch--hhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEG--TLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456888899999999999999986 7999999999765322 2334555666788889999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPT-PIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
||+ ++.+..+.......+++..+..++.|+++||+||| ++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 56666666555677999999999999999999999 53 79999999999999999999999999997664432
Q ss_pred CceeccccCCccccCccCC---------CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWK---------LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDI 963 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~---------~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 963 (1029)
. .....+++.|+|||++ ++.++|||||||++|||++|+.||.........+. .....
T Consensus 180 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------------~~~~~ 245 (318)
T 2dyl_A 180 A--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT------------KVLQE 245 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH------------HHHHS
T ss_pred c--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH------------HHhcc
Confidence 2 2334689999999984 45689999999999999999999975211111000 00000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHH
Q 036879 964 NLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTK 1007 (1029)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~ 1007 (1029)
.. ........++..+.+++.+||+.||++|||++|++++
T Consensus 246 ~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 246 EP-----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC-----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC-----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 0000011245678999999999999999999999974
No 283
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-34 Score=328.35 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=195.0
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CC-cEEEEEEeecccchhhHHHHHHHHHHhcCCCCc------eEEEEEEEecCCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DG-MQIAVKVFNLELEGTLRSFDAECEILGSIRHRN------LVKIISTCSSDHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 808 (1029)
.++|++.+.||+|+||+||+|+.. ++ +.||+|+++.. ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 568999999999999999999875 44 78999999754 334567888999999997665 9999999999999
Q ss_pred EEEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE----------------
Q 036879 809 KALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL---------------- 871 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill---------------- 871 (1029)
.++||||+ ++++.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 667777776544 57999999999999999999999 7889999999999999
Q ss_pred ---CCCCcEEEEccCCceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccc
Q 036879 872 ---NESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEIS 944 (1029)
Q Consensus 872 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 944 (1029)
+.++.+||+|||+++...... ....||+.|+|||++ ++.++||||+||++|||++|+.||......+.
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~- 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH- 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred ccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 568899999999998754322 235689999999984 57789999999999999999999975322110
Q ss_pred cchhchhccchhhhhhhhhh------------hh-------------hhhhhhhHHHHHHHHHHHHHHHHcccccccCCC
Q 036879 945 LKSRVNDSLHGKIINVVDIN------------LL-------------QKEDAYLTAKEQCVSSVLSLAMQCTRESAEERI 999 (1029)
Q Consensus 945 ~~~~~~~~~~~~~~~~~d~~------------~~-------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 999 (1029)
...+..........+.... .. .............+..+.+++.+||+.||++||
T Consensus 248 -~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 248 -LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp -HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred -HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 0000000000000000000 00 000000001123456899999999999999999
Q ss_pred CHHHHHHH
Q 036879 1000 NIKEALTK 1007 (1029)
Q Consensus 1000 t~~evl~~ 1007 (1029)
|++|++++
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999864
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-34 Score=316.04 Aligned_cols=234 Identities=12% Similarity=0.077 Sum_probs=185.9
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999986 58999999998653 23347789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++.. . ....++..++.|++.||+||| ++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~--~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT--S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EECCCEEEHHHHHTT--C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEecCCCCHHHHHhc--C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999843 2 356678899999999999999 7789999999999999999999998544
Q ss_pred CceeccccCCccccCccCCCCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhh
Q 036879 893 SMTQTQTLATIGYMAPEWKLSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAY 972 (1029)
Q Consensus 893 ~~~~~~~~gt~~y~aPE~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 972 (1029)
|++| ++.++|||||||++|||++|+.||.+......... ......+. ....
T Consensus 175 ------------~~~~---~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--~~~~~~~~------------~~~~ 225 (286)
T 3uqc_A 175 ------------TMPD---ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--AERDTAGQ------------PIEP 225 (286)
T ss_dssp ------------CCTT---CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--CCBCTTSC------------BCCH
T ss_pred ------------ccCC---CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--HHHHhccC------------CCCh
Confidence 3333 46789999999999999999999976432211000 00000000 0000
Q ss_pred hHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHHHHhHHhh
Q 036879 973 LTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKLLKIRNTL 1015 (1029)
Q Consensus 973 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L~~i~~~~ 1015 (1029)
......++..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 226 ~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 226 ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 11122356779999999999999999 9999999999987543
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-33 Score=324.42 Aligned_cols=313 Identities=19% Similarity=0.208 Sum_probs=278.4
Q ss_pred ccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCC
Q 036879 315 LPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGV 394 (1029)
Q Consensus 315 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 394 (1029)
+.+|+.|++++|.++...+..|..+++|++|++++|.+.+..+..+ ..+++|++|++++|++++.
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---------------~~l~~L~~L~L~~n~l~~~ 108 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAF---------------AYAHTIQKLYMGFNAIRYL 108 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTT---------------TTCTTCCEEECCSSCCCCC
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhc---------------cCCCCcCEEECCCCCCCcC
Confidence 7899999999999998777778999999999999999987665444 4789999999999999988
Q ss_pred CCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccC
Q 036879 395 LPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCG 474 (1029)
Q Consensus 395 ~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 474 (1029)
.|..+..+.. |++|++++|+++...+..|.++++|++|+|++|++++..+..|..+++|++|++++|++++. .+..
T Consensus 109 ~~~~~~~l~~-L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~ 184 (390)
T 3o6n_A 109 PPHVFQNVPL-LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSL 184 (390)
T ss_dssp CTTTTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGG
T ss_pred CHHHhcCCCC-CCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cccc
Confidence 8888999887 99999999999976666789999999999999999988888899999999999999999865 4667
Q ss_pred CCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEE
Q 036879 475 LRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKID 554 (1029)
Q Consensus 475 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 554 (1029)
+++|+.|++++|.+.+ +...++|+.|++++|.++.+... ..++|+.|++++|.+++. ..+..+++|++|+
T Consensus 185 l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 254 (390)
T 3o6n_A 185 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVD 254 (390)
T ss_dssp CTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred ccccceeecccccccc-----cCCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEE
Confidence 8999999999999874 34457899999999999876432 257899999999999963 5789999999999
Q ss_pred ccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 555 LSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 555 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
+++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+++.
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 255 LSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp CCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 99999998889999999999999999999995 6777788999999999999999 667778999999999999999987
Q ss_pred CCCCCCCCCccCcccccCCCCCCCCC
Q 036879 635 QVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 635 ~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.. ...+.+++.+.+.+|||.|++.
T Consensus 333 ~~--~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 333 LK--LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp CC--CCTTCCCSEEECCSSCEEHHHH
T ss_pred eC--chhhccCCEEEcCCCCccchhH
Confidence 53 4567899999999999999874
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7e-33 Score=312.77 Aligned_cols=305 Identities=23% Similarity=0.379 Sum_probs=211.2
Q ss_pred ccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccce
Q 036879 265 EIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTL 344 (1029)
Q Consensus 265 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 344 (1029)
.+++|+.|++++|.++.. | .+..+++|++|++++|.+. .+|. +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred hcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 456777777777777643 3 3677777777777777775 4444 33577777777777777642 24555555555
Q ss_pred ecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceecccccccccccccc
Q 036879 345 IDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEI 424 (1029)
Q Consensus 345 L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~ 424 (1029)
|++++|.+.+..+ +..+++|+.|+++ +|.....++ .+
T Consensus 115 L~l~~n~i~~~~~-----------------~~~l~~L~~L~l~-------------------------~n~~~~~~~-~~ 151 (347)
T 4fmz_A 115 LYLNEDNISDISP-----------------LANLTKMYSLNLG-------------------------ANHNLSDLS-PL 151 (347)
T ss_dssp EECTTSCCCCCGG-----------------GTTCTTCCEEECT-------------------------TCTTCCCCG-GG
T ss_pred EECcCCcccCchh-----------------hccCCceeEEECC-------------------------CCCCccccc-ch
Confidence 5555555543211 2234444444444 443332222 25
Q ss_pred CCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccce
Q 036879 425 GNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRT 504 (1029)
Q Consensus 425 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 504 (1029)
..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++
T Consensus 152 ~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~ 225 (347)
T 4fmz_A 152 SNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNS 225 (347)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCE
T ss_pred hhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCE
Confidence 666777777777777764333 6677777777777777765443 6667777777777777765544 777888888
Q ss_pred eeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccc
Q 036879 505 LSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKF 584 (1029)
Q Consensus 505 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 584 (1029)
|++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 226 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 226 LKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred EEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcC
Confidence 8888888876554 77888888888888888753 4578888888888888888754 4578888899999999988
Q ss_pred cccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCc
Q 036879 585 QGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 585 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 633 (1029)
++..|..+..+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 300 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 300 GNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 88888888888899999999999887666 788888999999998875
No 287
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-34 Score=344.28 Aligned_cols=271 Identities=21% Similarity=0.268 Sum_probs=196.3
Q ss_pred hCCCCCCceeccCcceEEEEEEec-CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEec------CCe
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSS------DHF 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 808 (1029)
.++|++.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 478999999999999999999875 78999999987653 3345678999999999999999999999765 677
Q ss_pred EEEEEeccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCc---EEEEccC
Q 036879 809 KALVLEYMPNGSLENWMYNKNR--SFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMV---ACLSDFG 883 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~---~kl~Dfg 883 (1029)
.++||||+++|+|.+++..... .+++..+..++.|++.|++||| +.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999976432 5888999999999999999999 678999999999999997664 9999999
Q ss_pred CceecCCCCCceeccccCCccccCccCC----CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchh--h
Q 036879 884 ISKLLGDETSMTQTQTLATIGYMAPEWK----LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGK--I 957 (1029)
Q Consensus 884 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~ 957 (1029)
.+........ .....||+.|+|||++ ++.++||||+||++|||++|+.||........ +...+....... .
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-WHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-SSTTCC------CCS
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-hhhhhhcccchhhhh
Confidence 9987654322 2345799999999984 57799999999999999999999965311100 000000000000 0
Q ss_pred hhhhhhh--hhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHH-----HHHHHHhHH
Q 036879 958 INVVDIN--LLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEA-----LTKLLKIRN 1013 (1029)
Q Consensus 958 ~~~~d~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~ev-----l~~L~~i~~ 1013 (1029)
.+..... ..............++..+.+++..|+..||++|||++|+ .+.++.+.+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000000 0000000011123357789999999999999999999884 455555544
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8e-34 Score=313.18 Aligned_cols=232 Identities=20% Similarity=0.281 Sum_probs=180.3
Q ss_pred hCCCCCC-ceeccCcceEEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHH-hcCCCCceEEEEEEEec----CCeE
Q 036879 737 TDGFSEN-NLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEIL-GSIRHRNLVKIISTCSS----DHFK 809 (1029)
Q Consensus 737 ~~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 809 (1029)
.++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3556666 77999999999999875 7899999998643 4577888887 66699999999999876 6778
Q ss_pred EEEEeccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECC---CCcEEEEccCCc
Q 036879 810 ALVLEYMPNGSLENWMYNKN-RSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNE---SMVACLSDFGIS 885 (1029)
Q Consensus 810 ~lV~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~---~~~~kl~Dfg~a 885 (1029)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997654 46999999999999999999999 778999999999999998 889999999999
Q ss_pred eecCCCCCceeccccCCccccCccCCCCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 886 KLLGDETSMTQTQTLATIGYMAPEWKLSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 886 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
...... .++.++||||+||++|||++|+.||......... ........
T Consensus 168 ~~~~~~-------------------~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~~~~~------------ 215 (299)
T 3m2w_A 168 KETTGE-------------------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIR------------ 215 (299)
T ss_dssp EECTTC-------------------GGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCSSC------------
T ss_pred cccccc-------------------cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-HHHHHHHh------------
Confidence 764321 1356899999999999999999999753221110 00000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHHHH
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALTKL 1008 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~~L 1008 (1029)
.............++..+.+++.+||+.||++|||++|++++-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 216 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0000000111133567899999999999999999999999853
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-33 Score=338.54 Aligned_cols=313 Identities=19% Similarity=0.197 Sum_probs=281.5
Q ss_pred ccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCC
Q 036879 315 LPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGV 394 (1029)
Q Consensus 315 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 394 (1029)
+.+++.|++++|.+...++..|..+++|+.|++++|.+.+..|..+ ..+++|+.|+|++|.+++.
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~---------------~~l~~L~~L~L~~n~l~~~ 114 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAF---------------AYAHTIQKLYMGFNAIRYL 114 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTT---------------TTCTTCCEEECCSSCCCCC
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHh---------------cCCCCCCEEECCCCcCCCC
Confidence 6899999999999998888889999999999999999998766554 4789999999999999998
Q ss_pred CCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccC
Q 036879 395 LPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCG 474 (1029)
Q Consensus 395 ~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 474 (1029)
.|..|+.+.. |++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..
T Consensus 115 ~~~~~~~l~~-L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~ 190 (597)
T 3oja_B 115 PPHVFQNVPL-LTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSL 190 (597)
T ss_dssp CTTTTTTCTT-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGG
T ss_pred CHHHHcCCCC-CCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhh
Confidence 8888999987 999999999999777777899999999999999999888889999999999999999998753 566
Q ss_pred CCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEE
Q 036879 475 LRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKID 554 (1029)
Q Consensus 475 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 554 (1029)
+++|+.|++++|.+++ +...++|+.|++++|.++.+.+.. .++|+.|+|++|.+++ +..+..+++|+.|+
T Consensus 191 l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~ 260 (597)
T 3oja_B 191 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVD 260 (597)
T ss_dssp CTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEE
T ss_pred hhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEE
Confidence 7899999999999874 345678999999999998665433 3689999999999996 57899999999999
Q ss_pred ccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 555 LSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 555 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++++
T Consensus 261 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 261 LSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp CCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCC
Confidence 99999999999999999999999999999995 6777888999999999999999 678888999999999999999987
Q ss_pred CCCCCCCCCccCcccccCCCCCCCCC
Q 036879 635 QVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 635 ~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.. ...+..+..+.+.+|||.|++.
T Consensus 339 ~~--~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 339 LK--LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CC--CCTTCCCSEEECCSSCEEHHHH
T ss_pred cC--hhhcCCCCEEEeeCCCCCChhH
Confidence 64 4567889999999999999874
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.1e-34 Score=348.11 Aligned_cols=239 Identities=19% Similarity=0.268 Sum_probs=193.1
Q ss_pred hCCCCCCceeccCcceEEEEEEec--CCcEEEEEEeeccc-chhhHHHHHHHHHHhcCCCCceEEEEEEEecCCe-----
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLS--DGMQIAVKVFNLEL-EGTLRSFDAECEILGSIRHRNLVKIISTCSSDHF----- 808 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 808 (1029)
.++|++.+.||+|+||+||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 468999999999999999999975 68999999986543 3445678999999999999999999999987554
Q ss_pred EEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 809 KALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 809 ~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.|+||||+++++|.+++.. .+++..+..++.||+.||+||| ++|||||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999987643 6899999999999999999999 6789999999999999985 8999999999876
Q ss_pred CCCCCceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhh
Q 036879 889 GDETSMTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINL 965 (1029)
Q Consensus 889 ~~~~~~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 965 (1029)
... ....||++|+|||++ .+.++|||||||++|||++|.+||.........
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~--------------------- 285 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP--------------------- 285 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---------------------
T ss_pred ccC-----CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccccc---------------------
Confidence 543 235699999999984 467899999999999999999887652111110
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHcccccccCCC-CHHHHHHHHHHhHHh
Q 036879 966 LQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERI-NIKEALTKLLKIRNT 1014 (1029)
Q Consensus 966 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-t~~evl~~L~~i~~~ 1014 (1029)
. .......+..+.+++.+||+.||++|| +++++.+.+..+.+.
T Consensus 286 -~-----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 -E-----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp -T-----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred -c-----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0 000112346789999999999999999 567777777766543
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-32 Score=308.46 Aligned_cols=303 Identities=22% Similarity=0.373 Sum_probs=223.7
Q ss_pred cccccccccceeecccccc-----cccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccc
Q 036879 245 EIGNITMLKGLYLVYTNLT-----GEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQ 319 (1029)
Q Consensus 245 ~~~~l~~L~~L~l~~n~l~-----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~ 319 (1029)
.+..+++|+.|++.++.+. ..+++|++|+|++|++++..+ +.++++|++|++++|.+. .+| .+ ..+++|+
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~-~~-~~l~~L~ 113 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DIS-AL-QNLTNLR 113 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GG-TTCTTCS
T ss_pred cchhcccccEEEEeCCccccchhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-Cch-HH-cCCCcCC
Confidence 4567899999999999987 357889999999999996544 999999999999999997 555 33 4699999
Q ss_pred eEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccc
Q 036879 320 QLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISI 399 (1029)
Q Consensus 320 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 399 (1029)
+|+|++|++++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~----------------~~~~l~~L~~L~l~~~~~~~~~~--- 172 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS----------------PLSNMTGLNYLTVTESKVKDVTP--- 172 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG----------------GGTTCTTCCEEECCSSCCCCCGG---
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc----------------chhhCCCCcEEEecCCCcCCchh---
Confidence 99999999996544 9999999999999997654332 24467777888887777663322
Q ss_pred cCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCc
Q 036879 400 GNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLS 479 (1029)
Q Consensus 400 ~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 479 (1029)
+..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+
T Consensus 173 ------------------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~ 224 (347)
T 4fmz_A 173 ------------------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLN 224 (347)
T ss_dssp ------------------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred ------------------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCC
Confidence 3344555555555555553222 5555556666666665554433 55555666
Q ss_pred EEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCc
Q 036879 480 EFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRND 559 (1029)
Q Consensus 480 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 559 (1029)
+|++++|++++..+ +..+++|++|++++|+++++ ..+..+++|+.|++++|++++. ..+..+++|+.|++++|+
T Consensus 225 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 225 SLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred EEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc
Confidence 66666666654433 67777788888888877754 4577788888888888888753 357788888888888888
Q ss_pred CCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc
Q 036879 560 LSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 560 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
+++..|..|..+++|+.|+|++|++++..| +..+++|++|++++|+|+
T Consensus 299 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 887778888888888999999998886655 778888999999998876
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-34 Score=329.67 Aligned_cols=236 Identities=18% Similarity=0.204 Sum_probs=176.0
Q ss_pred CCCCCCceeccCcceEEEEEEec-CCcEEEEEEeecccc---hhhHHHHHHHHHHhcCCC-Cce---------------E
Q 036879 738 DGFSENNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE---GTLRSFDAECEILGSIRH-RNL---------------V 797 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------------v 797 (1029)
..|...+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| ++. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34667789999999999999965 799999999874432 235779999999999977 211 1
Q ss_pred E------EEEEEec-----CCeEEEEEeccCCCCHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 036879 798 K------IISTCSS-----DHFKALVLEYMPNGSLENWMY------NKNRSFDILQRLNMVIDVASALEYLHYDHPTPII 860 (1029)
Q Consensus 798 ~------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~giv 860 (1029)
. ++.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+||| ++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1 1111111 12346777766 789999884 22445778899999999999999999 77899
Q ss_pred EcCCCCCCEEECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCC--------------CCCCcchhHHHHHHH
Q 036879 861 HCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWK--------------LSRKGDVYSYGIILM 926 (1029)
Q Consensus 861 H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~--------------~~~~~DvwSlGvil~ 926 (1029)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ ++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999865432 233457 999999986 455899999999999
Q ss_pred HHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHcccccccCCCCHHHHHH
Q 036879 927 ETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVLSLAMQCTRESAEERINIKEALT 1006 (1029)
Q Consensus 927 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~evl~ 1006 (1029)
||++|+.||......+. .. ..+... ..++..+.+++.+||+.||++||++.|+++
T Consensus 309 elltg~~Pf~~~~~~~~--~~---------------~~~~~~--------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG--SE---------------WIFRSC--------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSC--SG---------------GGGSSC--------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhh--HH---------------HHHhhc--------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999976321111 00 000000 123467899999999999999999988876
Q ss_pred H
Q 036879 1007 K 1007 (1029)
Q Consensus 1007 ~ 1007 (1029)
+
T Consensus 364 ~ 364 (413)
T 3dzo_A 364 T 364 (413)
T ss_dssp S
T ss_pred C
Confidence 4
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.2e-31 Score=300.40 Aligned_cols=288 Identities=20% Similarity=0.267 Sum_probs=178.4
Q ss_pred CCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCccccc
Q 036879 292 SLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGF 371 (1029)
Q Consensus 292 ~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~ 371 (1029)
+|+.+++++|.+. .+|..++ ++|+.|+|++|.+++..|..|.++++|++|++++|.+++..|..
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------ 97 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKA------------ 97 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG------------
T ss_pred cCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhH------------
Confidence 5677777777775 6666553 46777777777777666666777777777777777666544433
Q ss_pred ccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccc--ccccccc
Q 036879 372 LTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTG--SIPKAIG 449 (1029)
Q Consensus 372 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~ 449 (1029)
+..+++|++|++++|+++ .+|..+. ..|++|++++|++++..+..|.++++|++|++++|.++. ..+..+.
T Consensus 98 ---~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 170 (332)
T 2ft3_A 98 ---FSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD 170 (332)
T ss_dssp ---STTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC
T ss_pred ---hhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCccccc
Confidence 235666777777777666 3444333 236666666666665555556666666666666666642 4455555
Q ss_pred CCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEE
Q 036879 450 RLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNV 529 (1029)
Q Consensus 450 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 529 (1029)
.+ +|++|++++|++++. |..+. ++|++|++++|++++..+..|..+++|+.|
T Consensus 171 ~l-~L~~L~l~~n~l~~l-------------------------~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 171 GL-KLNYLRISEAKLTGI-------------------------PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SC-CCSCCBCCSSBCSSC-------------------------CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred CC-ccCEEECcCCCCCcc-------------------------Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 55 666666666666532 22221 456666666666665555566666666666
Q ss_pred EccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccC------CCCCCEEeC
Q 036879 530 NLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGG------LTSLNFLDM 603 (1029)
Q Consensus 530 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~L 603 (1029)
+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|.. ..+|+.|++
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l 301 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISL 301 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEEC
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEe
Confidence 66666666555556666666666666666666 55556666666666666666666555555543 356778888
Q ss_pred cCCccc--CcCchhhhcccccceeeccCCC
Q 036879 604 SSNNLS--GEIPNSLKALSLLKFLNLSFNG 631 (1029)
Q Consensus 604 s~N~l~--~~~~~~~~~l~~L~~L~l~~N~ 631 (1029)
++|.++ +..|..|..+++|+.+++++|+
T Consensus 302 ~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecCcccccccCcccccccchhhhhhccccc
Confidence 888776 5667777788888888887774
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.5e-31 Score=296.68 Aligned_cols=267 Identities=22% Similarity=0.264 Sum_probs=218.8
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLY 458 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 458 (1029)
++|+.|++++|.+++..|..+.++.. |++|++++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQH-LYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTT-CCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCC-CcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 45677777777777666667777765 778888888888777888888888888888888888 4555444 7888888
Q ss_pred eccccccCcccccccCCCCCcEEecCCCccc--CccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcc
Q 036879 459 LQHNKLQGSITTDLCGLRSLSEFYSDGNELN--GSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSL 536 (1029)
Q Consensus 459 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 536 (1029)
+++|++++..+..|..+++|+.|++++|.++ +..+..+..+ +|++|++++|+++++ |..+. ++|+.|++++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI-PKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC-CSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc-Ccccc--CCCCEEECCCCcC
Confidence 9888888877778888888999999988885 3778888888 999999999999974 44443 7899999999999
Q ss_pred cCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhh
Q 036879 537 NGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSL 616 (1029)
Q Consensus 537 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 616 (1029)
++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|++|++++|++++..+..|
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 9888899999999999999999999888889999999999999999999 788889999999999999999998887777
Q ss_pred hc------ccccceeeccCCCCcC--CCCC-CCCCCccCcccccCCC
Q 036879 617 KA------LSLLKFLNLSFNGLQG--QVPH-GGPFTNLSSQSFVGNK 654 (1029)
Q Consensus 617 ~~------l~~L~~L~l~~N~l~~--~~~~-~~~~~~l~~~~~~~n~ 654 (1029)
.. .+.|+.|++++|++.. ..|. ...++.+..+.+.+|.
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 65 3679999999999983 3332 2345666677777663
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3e-31 Score=296.99 Aligned_cols=289 Identities=22% Similarity=0.263 Sum_probs=157.2
Q ss_pred CCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCccccc
Q 036879 292 SLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGF 371 (1029)
Q Consensus 292 ~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~ 371 (1029)
+|+.++++++.+. .+|..++ ++|+.|+|++|++++..+..|.++++|++|++++|.+.+..|..+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----------- 96 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF----------- 96 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTT-----------
T ss_pred CCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHh-----------
Confidence 3455555555553 4444332 345555555555555544455555555555555555544433332
Q ss_pred ccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccc--ccccccc
Q 036879 372 LTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTG--SIPKAIG 449 (1029)
Q Consensus 372 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~ 449 (1029)
..+++|++|++++|+++ .+|..+. ..|++|++++|++++..+..|.++++|++|+|++|.++. ..+..|.
T Consensus 97 ----~~l~~L~~L~Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 168 (330)
T 1xku_A 97 ----APLVKLERLYLSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168 (330)
T ss_dssp ----TTCTTCCEEECCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred ----cCCCCCCEEECCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc
Confidence 24455566666666555 3333332 235666666666665555566666667777777766642 4455666
Q ss_pred CCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEE
Q 036879 450 RLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNV 529 (1029)
Q Consensus 450 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 529 (1029)
.+++|++|++++|.++..... +. ++|++|++++|+++++.|..|..+++|+.|
T Consensus 169 ~l~~L~~L~l~~n~l~~l~~~-------------------------~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 169 GMKKLSYIRIADTNITTIPQG-------------------------LP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp GCTTCCEEECCSSCCCSCCSS-------------------------CC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred CCCCcCEEECCCCccccCCcc-------------------------cc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 666666666666666532221 11 344555555555554444455555555555
Q ss_pred EccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccC------CCCCCEEeC
Q 036879 530 NLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGG------LTSLNFLDM 603 (1029)
Q Consensus 530 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~L 603 (1029)
+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|.. ...|+.|++
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l 300 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSL 300 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEEC
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEe
Confidence 55555555444445555555555555555555 44555555555555555555555444444432 356777777
Q ss_pred cCCcccC--cCchhhhcccccceeeccCCC
Q 036879 604 SSNNLSG--EIPNSLKALSLLKFLNLSFNG 631 (1029)
Q Consensus 604 s~N~l~~--~~~~~~~~l~~L~~L~l~~N~ 631 (1029)
++|.+.. ..|..|..+..++.++|++|+
T Consensus 301 ~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 301 FSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ecCcccccccCccccccccceeEEEecccC
Confidence 7777653 556677777777777777774
No 296
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.8e-33 Score=315.87 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=182.0
Q ss_pred hCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc--------hhhHHHHHHHHHHhcCC---------CCceEEE
Q 036879 737 TDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE--------GTLRSFDAECEILGSIR---------HRNLVKI 799 (1029)
Q Consensus 737 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~l 799 (1029)
.++|++.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45688899999999999999998 789999999986531 23367889999998886 7777777
Q ss_pred EEEE-----------------ec-------------CCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 036879 800 ISTC-----------------SS-------------DHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALE 849 (1029)
Q Consensus 800 ~~~~-----------------~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 849 (1029)
.+.+ .+ .+..++||||+++|++.+.+. +..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~--~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR--TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT--TTCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH--hcCCCHHHHHHHHHHHHHHHH
Confidence 6654 22 678999999999997766663 356899999999999999999
Q ss_pred HHH-hcCCCCcEEcCCCCCCEEECCCC--------------------cEEEEccCCceecCCCCCceeccccCCccccCc
Q 036879 850 YLH-YDHPTPIIHCDLNPSNILLNESM--------------------VACLSDFGISKLLGDETSMTQTQTLATIGYMAP 908 (1029)
Q Consensus 850 ~Lh-~~~~~givH~Dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aP 908 (1029)
||| +. ||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 999 55 499999999999999887 9999999999876432 24699999999
Q ss_pred cCCC---CCCcchhHHHHH-HHHHhcCCCCCCcccccccccchhchhccchhhhhhhhhhhhhhhhhhhHHHHHHHHHHH
Q 036879 909 EWKL---SRKGDVYSYGII-LMETFTKKKPTDELFVGEISLKSRVNDSLHGKIINVVDINLLQKEDAYLTAKEQCVSSVL 984 (1029)
Q Consensus 909 E~~~---~~~~DvwSlGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 984 (1029)
|++. +.++||||+|++ .+++++|..||.... |.... ........ ..........+..++.++.
T Consensus 247 E~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~--------~~~~~----~~~~~~~~-~~~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 247 DLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVL--------WLHYL----TDKMLKQM-TFKTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHH--------HHHHH----HHHHHHTC-CCSSCCCSHHHHHHHHHHH
T ss_pred hhhcCCCccceehhhhhCCCCcccccccCCCcchh--------hhhHH----HHhhhhhh-ccCcccchhhhhhcCHHHH
Confidence 9954 557999998777 778899999975410 00000 00000000 0001111223456788999
Q ss_pred HHHHHcccccccCCCCHHHHH-HH
Q 036879 985 SLAMQCTRESAEERINIKEAL-TK 1007 (1029)
Q Consensus 985 ~li~~cl~~dP~~Rpt~~evl-~~ 1007 (1029)
+++.+|++.| |++|++ ++
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999966 999988 53
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.3e-30 Score=291.80 Aligned_cols=267 Identities=20% Similarity=0.238 Sum_probs=214.9
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLY 458 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 458 (1029)
++|+.|++++|++++..+..+.++.+ |++|++++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKN-LHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTT-CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhccCCC-CCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 35666777777776665656666665 777777777777777778888888888888888887 4554443 6788888
Q ss_pred eccccccCcccccccCCCCCcEEecCCCcccC--ccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcc
Q 036879 459 LQHNKLQGSITTDLCGLRSLSEFYSDGNELNG--SLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSL 536 (1029)
Q Consensus 459 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 536 (1029)
+++|++++..+..|.++++|+.|++++|.+.. ..+..|.++++|++|++++|+++.+ |..+. ++|+.|++++|++
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-PQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-CSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC-Ccccc--ccCCEEECCCCcC
Confidence 88888887777778888888888888888853 6788899999999999999999864 44443 8999999999999
Q ss_pred cCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhh
Q 036879 537 NGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSL 616 (1029)
Q Consensus 537 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 616 (1029)
++..|..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 9888999999999999999999999888889999999999999999999 788899999999999999999998877777
Q ss_pred hc------ccccceeeccCCCCcCC--CCC-CCCCCccCcccccCC
Q 036879 617 KA------LSLLKFLNLSFNGLQGQ--VPH-GGPFTNLSSQSFVGN 653 (1029)
Q Consensus 617 ~~------l~~L~~L~l~~N~l~~~--~~~-~~~~~~l~~~~~~~n 653 (1029)
.. .+.|+.|++++|++... .|. ......+..+.+.+|
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 54 37899999999999752 222 233455666666666
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.1e-34 Score=338.77 Aligned_cols=315 Identities=22% Similarity=0.170 Sum_probs=163.7
Q ss_pred CCcccCCCCcEEEccCcccCCCCCchhhhccc----ccceEeecCcccCC----CCCcccccccccceecCCCccccCCC
Q 036879 285 PEIINISSLTVLSLTANNLLGNLPSNIGHSLP----NLQQLILGGNRLTG----PIPSSISNASMLTLIDMPYNLFSGFI 356 (1029)
Q Consensus 285 ~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~----~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~ 356 (1029)
..+..+++|++|+|++|.+.+..+..++..++ +|++|+|++|+++. .++..+..+++|+.|++++|.+.+..
T Consensus 50 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 129 (461)
T 1z7x_W 50 SALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAG 129 (461)
T ss_dssp HHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHH
T ss_pred HHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHH
Confidence 33444455555555555544323333333333 45555555555552 23445555555555555555543221
Q ss_pred CCCCCCCCCCcccccccc-cccccccceeeccCCcCCCCC----CccccCchhhhcceeccccccccccccccC-----C
Q 036879 357 PNSLGFCHPYDELGFLTS-LTNCKDLRKLILSENPLSGVL----PISIGNLSNAMDVLYLSACNIKGSIPSEIG-----N 426 (1029)
Q Consensus 357 p~~~~~~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~-----~ 426 (1029)
+..+. .. ....++|++|++++|++++.. +..+..+++ |++|++++|.+++..+..+. .
T Consensus 130 ~~~l~-----------~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~-L~~L~L~~n~i~~~~~~~l~~~l~~~ 197 (461)
T 1z7x_W 130 LQLLC-----------EGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD-FKELTVSNNDINEAGVRVLCQGLKDS 197 (461)
T ss_dssp HHHHH-----------HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTT-CCEEECCSSBCHHHHHHHHHHHHHHS
T ss_pred HHHHH-----------HHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCC-CCEEECcCCCcchHHHHHHHHHHhcC
Confidence 11110 00 112345666666666655432 222222232 55555555555443333332 2
Q ss_pred cCcCcEEEecCcccccc----ccccccCCCCCCEEEeccccccCccc-----ccccCCCCCcEEecCCCcccCc----cc
Q 036879 427 LNNLTTLHLETNELTGS----IPKAIGRLQKLQGLYLQHNKLQGSIT-----TDLCGLRSLSEFYSDGNELNGS----LP 493 (1029)
Q Consensus 427 l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~~l~~L~~L~l~~N~l~~~----~~ 493 (1029)
.++|++|+|++|.+++. ++..+..+++|++|++++|.++.... ..+..+++|++|++++|.++.. ++
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 44667777777766642 35556666677777777776654322 1222456666666666666543 45
Q ss_pred cccccccccceeeccCccccCCCCCCccC-----CCCCcEEEccCCcccCc----CCccccccccccEEEccCCcCCCCC
Q 036879 494 QCLDSLISLRTLSLGFNRLTSVIPSSLWS-----LRDILNVNLSSNSLNGT----LPVEIGNLKVVTKIDLSRNDLSGEI 564 (1029)
Q Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 564 (1029)
..+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 55556666777777766665433332222 24666666666666643 3344455566666666666665443
Q ss_pred CccccC-----cccccccccccccccc----cCCccccCCCCCCEEeCcCCcccCc
Q 036879 565 PSSIGD-----LKNMQHLSLADNKFQG----SIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 565 p~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
+..+.. .++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 433332 4566666666666664 4555555666666666666666543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=7.9e-34 Score=333.87 Aligned_cols=381 Identities=20% Similarity=0.163 Sum_probs=224.5
Q ss_pred cchhccccccccCCCCc-ccccccccceEEcccccccC----CCCccccccccccceeeccccccc--------ccC---
Q 036879 204 LAELHLAYNQLSGQIPS-TLFECKQLKILSLSVNNFIG----SIPREIGNITMLKGLYLVYTNLTG--------EIQ--- 267 (1029)
Q Consensus 204 L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~n~l~~--------~l~--- 267 (1029)
+++|+|++|+++..... .+..+++|++|+|++|++++ .++..+..+++|+.|++++|.+.+ .+.
T Consensus 5 l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 84 (461)
T 1z7x_W 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPS 84 (461)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTT
T ss_pred ceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCC
Confidence 44455555554432222 25566777777777777653 234555566666666666665542 122
Q ss_pred -cccEEEccCCcccC----CCCCCcccCCCCcEEEccCcccCCCCCchhhh----cccccceEeecCcccCCCC----Cc
Q 036879 268 -GLQVLALSSNRLTG----VIPPEIINISSLTVLSLTANNLLGNLPSNIGH----SLPNLQQLILGGNRLTGPI----PS 334 (1029)
Q Consensus 268 -~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~----~l~~L~~L~L~~N~l~~~~----p~ 334 (1029)
+|++|+|++|+|+. .++..+..+++|++|+|++|.+.+..+..+.. ..++|++|+|++|++++.. +.
T Consensus 85 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 164 (461)
T 1z7x_W 85 CKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHH
Confidence 57788888888774 45777778888888888888775433433332 2346777888777777532 34
Q ss_pred ccccccccceecCCCccccCCCCCCCCCCCCCcccccccccc-cccccceeeccCCcCCCCCCccccCchhhhcceeccc
Q 036879 335 SISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLT-NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSA 413 (1029)
Q Consensus 335 ~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~ 413 (1029)
.+..+++|+.|++++|.+....+..+. ..+. ..++|++|++++|.+++....
T Consensus 165 ~l~~~~~L~~L~L~~n~i~~~~~~~l~-----------~~l~~~~~~L~~L~L~~n~l~~~~~~---------------- 217 (461)
T 1z7x_W 165 VLRAKPDFKELTVSNNDINEAGVRVLC-----------QGLKDSPCQLEALKLESCGVTSDNCR---------------- 217 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHH-----------HHHHHSCCCCCEEECTTSCCBTTHHH----------------
T ss_pred HHhhCCCCCEEECcCCCcchHHHHHHH-----------HHHhcCCCCceEEEccCCCCcHHHHH----------------
Confidence 444455666666666555422111100 0000 123455555555544421000
Q ss_pred cccccccccccCCcCcCcEEEecCccccccc-----cccccCCCCCCEEEeccccccCc----ccccccCCCCCcEEecC
Q 036879 414 CNIKGSIPSEIGNLNNLTTLHLETNELTGSI-----PKAIGRLQKLQGLYLQHNKLQGS----ITTDLCGLRSLSEFYSD 484 (1029)
Q Consensus 414 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~ 484 (1029)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|++++|.++.. .+..+..+++|++|+++
T Consensus 218 -----~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 218 -----DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp -----HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT
T ss_pred -----HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC
Confidence 13444555666666666666665322 22223456666666666666543 33444556666666666
Q ss_pred CCcccCccccccccc-----cccceeeccCccccCC----CCCCccCCCCCcEEEccCCcccCcCCccccc-----cccc
Q 036879 485 GNELNGSLPQCLDSL-----ISLRTLSLGFNRLTSV----IPSSLWSLRDILNVNLSSNSLNGTLPVEIGN-----LKVV 550 (1029)
Q Consensus 485 ~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L 550 (1029)
+|.+++..+..+... ++|++|+|++|.+++. ++..+..+++|+.|++++|.+++..+..+.. .++|
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 372 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL 372 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCC
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCce
Confidence 666655444444332 5777777777777654 3455666678888888888777654544443 5688
Q ss_pred cEEEccCCcCCC----CCCccccCcccccccccccccccccCCcccc-----CCCCCCEEeCcCCcccCcCchhh
Q 036879 551 TKIDLSRNDLSG----EIPSSIGDLKNMQHLSLADNKFQGSIPDSLG-----GLTSLNFLDMSSNNLSGEIPNSL 616 (1029)
Q Consensus 551 ~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~ 616 (1029)
+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.....+. ...+|+.|++.++.+....++.+
T Consensus 373 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l 447 (461)
T 1z7x_W 373 RVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 447 (461)
T ss_dssp CEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred EEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHH
Confidence 888888888875 5677777788888888888888764222221 23468888888887775554443
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=5.2e-31 Score=293.83 Aligned_cols=283 Identities=21% Similarity=0.277 Sum_probs=210.4
Q ss_pred CCCCCcccCCCCC--CCCCCceeeEEEcCCC--CceEEEecccccccccCCccC--CCCcCCCeEeccCcccccCCcccc
Q 036879 19 NDPLNVLASNWST--NTSVCNWFGVTCSPRH--RRVTALNLAYMGLLGTIPPEL--GNLSFLSLLNVTNNSFSGTLPIQL 92 (1029)
Q Consensus 19 ~~~~~~~~~~w~~--~~~~c~w~gv~c~~~~--~~v~~l~l~~~~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p~~~ 92 (1029)
.|+...|.+ |.. ..|+|+|.++-|.... ..+. ...+.... .+|..+ ...+.++.|+|++|+++ .+|..+
T Consensus 26 ~~~~~aLl~-~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 26 RPYHDVLSQ-WQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCHHHHHHH-HHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred chHHHHHHH-HHHhccCCchhhhhhhccccccccccc--ccCCcchh-hhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 355566766 754 3578999998884221 1111 11111111 122222 23577899999999998 888889
Q ss_pred ccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCc
Q 036879 93 SNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLL 172 (1029)
Q Consensus 93 ~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 172 (1029)
+++++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+....
T Consensus 101 ~~l~~L~~L~L~~n~l~--~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~--- 174 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM--ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD--- 174 (328)
T ss_dssp GGGTTCSEEEEESSCCC--CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC---
T ss_pred hhCCCCCEEECCCCCcc--chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc---
Confidence 99999999999999998 57888999999999999999988 7898999999999999999888878887665410
Q ss_pred ccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccc
Q 036879 173 AIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITML 252 (1029)
Q Consensus 173 ~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 252 (1029)
+.+. +. ...+|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..++++++|
T Consensus 175 --------~~~~---~~----------~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L 231 (328)
T 4fcg_A 175 --------ASGE---HQ----------GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKL 231 (328)
T ss_dssp ---------CCC---EE----------ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTC
T ss_pred --------chhh---hc----------cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCC
Confidence 0000 00 0124555566666666 567778888888888888888874 56667666554
Q ss_pred cceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCC
Q 036879 253 KGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPI 332 (1029)
Q Consensus 253 ~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~ 332 (1029)
+ +|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+. .+++|++|+|++|.+.+.+
T Consensus 232 ~-----------------~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 232 E-----------------ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp C-----------------EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCC
T ss_pred C-----------------EEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhc
Confidence 4 778888888888888899999999999999888888888876 5899999999999999899
Q ss_pred CcccccccccceecCCCcccc
Q 036879 333 PSSISNASMLTLIDMPYNLFS 353 (1029)
Q Consensus 333 p~~l~~l~~L~~L~ls~N~l~ 353 (1029)
|..+.++++|+.++++.+.+.
T Consensus 294 P~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 294 PSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CGGGGGSCTTCEEECCGGGSC
T ss_pred cHHHhhccCceEEeCCHHHHH
Confidence 999999998888888877664
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=278.29 Aligned_cols=275 Identities=21% Similarity=0.247 Sum_probs=218.4
Q ss_pred ceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccc--ccccccCCCCCCEEEe
Q 036879 382 RKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGS--IPKAIGRLQKLQGLYL 459 (1029)
Q Consensus 382 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L 459 (1029)
+.++++++.++ .+|..+. ..+++|++++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 56788888877 5555443 2478888888888866556688888999999999988733 2566778888999999
Q ss_pred ccccccCcccccccCCCCCcEEecCCCcccCccc-cccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 460 QHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLP-QCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 460 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
++|.++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 9998874 45568888899999999998887665 678888999999999999988888888889999999999999886
Q ss_pred -cCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhh
Q 036879 539 -TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLK 617 (1029)
Q Consensus 539 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 617 (1029)
..|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|++|+|++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 5788888999999999999999887788888899999999999999877777888889999999999999988888888
Q ss_pred ccc-ccceeeccCCCCcCCCCCCC---CCCccCcccccCCCCCCCCCC
Q 036879 618 ALS-LLKFLNLSFNGLQGQVPHGG---PFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 618 ~l~-~L~~L~l~~N~l~~~~~~~~---~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
.++ +|+.|++++|++++..+... .+.....+....+...|..|.
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 884 89999999999987654311 112223333455666676653
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=285.43 Aligned_cols=257 Identities=19% Similarity=0.171 Sum_probs=166.7
Q ss_pred ccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEe
Q 036879 380 DLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYL 459 (1029)
Q Consensus 380 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 459 (1029)
+|++|++++|++++..+..+..+.+ |++|++++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVN-LQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTT-CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred cCcEEECCCCcCcccCHHHhccCCC-CCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 4556666666665544445555554 666666666666655666666677777777777776544445666677777777
Q ss_pred ccccccCccc-ccccCCCCCcEEecCCC-cccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCccc
Q 036879 460 QHNKLQGSIT-TDLCGLRSLSEFYSDGN-ELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLN 537 (1029)
Q Consensus 460 ~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 537 (1029)
++|++++... ..|..+++|++|++++| .+....+..|.++++|++|++++|++++..|..+..+++|++|++++|+++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 7777665544 45666677777777666 355555666777777777777777777766777777777777777777776
Q ss_pred CcCCccccccccccEEEccCCcCCCCCCcccc---Ccccccccccccccccc----cCCccccCCCCCCEEeCcCCcccC
Q 036879 538 GTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIG---DLKNMQHLSLADNKFQG----SIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 538 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
...+..+..+++|+.|++++|.+++..+..+. ....++.++|++|.+++ .+|..+..+++|++|+|++|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 44333444567777777777777755444332 24445555665555554 356667777778888888887774
Q ss_pred cCchhhhcccccceeeccCCCCcCCCC
Q 036879 611 EIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 611 ~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
..+..|..+++|+.|++++|+++|.+|
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 444445777778888888877777665
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=283.97 Aligned_cols=280 Identities=19% Similarity=0.163 Sum_probs=243.7
Q ss_pred cccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 377 NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 377 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
.++.....++++|.++ .+|..+.. .+++|++++|++++..+..|.++++|++|+|++|++++..|..|..+++|++
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~~---~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLTE---AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCCT---TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCeEeeCCCCCcc-cccccccc---cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 4556667899999998 66766553 4999999999999877779999999999999999999888889999999999
Q ss_pred EEeccccccCcccccccCCCCCcEEecCCCcccCccc-cccccccccceeeccCc-cccCCCCCCccCCCCCcEEEccCC
Q 036879 457 LYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLP-QCLDSLISLRTLSLGFN-RLTSVIPSSLWSLRDILNVNLSSN 534 (1029)
Q Consensus 457 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N 534 (1029)
|+|++|++++..+..|..+++|++|++++|+++...+ ..|..+++|++|++++| .++++.+..|.++++|+.|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999998888889999999999999999996655 58999999999999999 588888889999999999999999
Q ss_pred cccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCcccc---CCCCCCEEeCcCCcccC-
Q 036879 535 SLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLG---GLTSLNFLDMSSNNLSG- 610 (1029)
Q Consensus 535 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~- 610 (1029)
++++..|..+..+++|++|++++|+++...+..+..+++|+.|+|++|++++..+..+. ....++.++|++|.+++
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 99998899999999999999999999754444456689999999999999976655443 35778899999998886
Q ss_pred ---cCchhhhcccccceeeccCCCCcCCCCCC-CCCCccCcccccCCCCCCCCC
Q 036879 611 ---EIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 611 ---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
.+|..+..+++|+.|++++|+++..++.. ..+.++..+.+.+||+.|+||
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 46788999999999999999999544443 578899999999999999886
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=284.67 Aligned_cols=252 Identities=24% Similarity=0.290 Sum_probs=225.4
Q ss_pred ccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEe
Q 036879 380 DLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYL 459 (1029)
Q Consensus 380 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 459 (1029)
..+.++.+++.++ .+|..+. ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 3567888888888 6676655 34889999999999888899999999999999999999888889999999999999
Q ss_pred ccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccC-ccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 460 QHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGF-NRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 460 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
++|+++...+..|..+++|++|++++|++....+..|..+++|++|+|++ |.++.+.+..|.++++|+.|+|++|+++.
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 99999988888899999999999999999988888999999999999998 56666666789999999999999999984
Q ss_pred cCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhc
Q 036879 539 TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKA 618 (1029)
Q Consensus 539 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 618 (1029)
+| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 45 4888999999999999999888999999999999999999999888899999999999999999999888888999
Q ss_pred ccccceeeccCCCCcCCCC
Q 036879 619 LSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 619 l~~L~~L~l~~N~l~~~~~ 637 (1029)
+++|+.|+|++|++.|...
T Consensus 278 l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTCCEEECCSSCEECSST
T ss_pred ccCCCEEEcCCCCccCCCC
Confidence 9999999999999987653
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.5e-28 Score=285.62 Aligned_cols=252 Identities=22% Similarity=0.259 Sum_probs=221.3
Q ss_pred ccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEe
Q 036879 380 DLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYL 459 (1029)
Q Consensus 380 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 459 (1029)
....++.+++.++ .+|..+. ..+++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3467888888887 5665554 34889999999999888889999999999999999999888888999999999999
Q ss_pred ccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccC-ccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 460 QHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGF-NRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 460 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
++|+++...+..|..+++|++|++++|++....+..|..+++|++|++++ |.+..+.+..|.++++|+.|+|++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999988888899999999999999999988888899999999999998 66666666789999999999999999985
Q ss_pred cCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhc
Q 036879 539 TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKA 618 (1029)
Q Consensus 539 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 618 (1029)
. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 3 4 5888999999999999999888999999999999999999999888899999999999999999999888888899
Q ss_pred ccccceeeccCCCCcCCCC
Q 036879 619 LSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 619 l~~L~~L~l~~N~l~~~~~ 637 (1029)
+++|+.|+|++|++.+...
T Consensus 289 l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCEECSTT
T ss_pred ccCCCEEEccCCCcCCCCC
Confidence 9999999999999987654
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4.7e-29 Score=298.73 Aligned_cols=294 Identities=28% Similarity=0.343 Sum_probs=222.1
Q ss_pred CCcccCCCCCCCCCCceeeEEE------cCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccc
Q 036879 22 LNVLASNWSTNTSVCNWFGVTC------SPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNL 95 (1029)
Q Consensus 22 ~~~~~~~w~~~~~~c~w~gv~c------~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 95 (1029)
..+.++ |..+.+||.|+|..| .+....++.|+++++++. .+|..+. ++|+.|+|++|+|+ .+|. .+
T Consensus 9 ~~~w~~-W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 9 DAVWSA-WRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp -CHHHH-HHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHH-HHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 345555 887889999977542 222345889999999998 9999886 89999999999998 6776 57
Q ss_pred cCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccc
Q 036879 96 RRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAID 175 (1029)
Q Consensus 96 ~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 175 (1029)
++|++|+|++|+|+. +|. .+++|++|+|++|++++ +|. .+++|+.|++++|+++ .+|.. +++|++|+
T Consensus 81 ~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~ 147 (622)
T 3g06_A 81 PELRTLEVSGNQLTS--LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELS 147 (622)
T ss_dssp TTCCEEEECSCCCSC--CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEE
T ss_pred CCCCEEEcCCCcCCc--CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEE
Confidence 899999999999995 565 67999999999999994 665 6789999999999999 57764 48899999
Q ss_pred cCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccce
Q 036879 176 LSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGL 255 (1029)
Q Consensus 176 ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 255 (1029)
+++|++++++... .+|+.|++++|+|++ +| ..+++|+.|+|++|++++ +|..+
T Consensus 148 Ls~N~l~~l~~~~-------------~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~~--------- 200 (622)
T 3g06_A 148 VSDNQLASLPALP-------------SELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTLP--------- 200 (622)
T ss_dssp CCSSCCSCCCCCC-------------TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCC---------
T ss_pred CcCCcCCCcCCcc-------------CCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCcc---------
Confidence 9999998754321 256778888888885 45 456889999999998874 44322
Q ss_pred eecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcc
Q 036879 256 YLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSS 335 (1029)
Q Consensus 256 ~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~ 335 (1029)
++|+.|++++|.|+. +|.. +++|++|+|++|+++ .+| ..+++|+.|+|++|+|++ +|.
T Consensus 201 -----------~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~-~lp----~~l~~L~~L~Ls~N~L~~-lp~- 258 (622)
T 3g06_A 201 -----------SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLP----VLPSELKELMVSGNRLTS-LPM- 258 (622)
T ss_dssp -----------TTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-
T ss_pred -----------chhhEEECcCCcccc-cCCC---CCCCCEEEccCCccC-cCC----CCCCcCcEEECCCCCCCc-CCc-
Confidence 345567777777773 3432 367888888888776 466 235778888888888874 443
Q ss_pred cccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCch
Q 036879 336 ISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLS 403 (1029)
Q Consensus 336 l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 403 (1029)
.+++|+.|++++|.++ .+|.. +..+++|+.|+|++|++++..|..+..+.
T Consensus 259 --~~~~L~~L~Ls~N~L~-~lp~~---------------l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 --LPSGLLSLSVYRNQLT-RLPES---------------LIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp --CCTTCCEEECCSSCCC-SCCGG---------------GGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred --ccccCcEEeCCCCCCC-cCCHH---------------HhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 5577888888888877 44433 44778888889999988888888766544
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.5e-28 Score=272.04 Aligned_cols=258 Identities=19% Similarity=0.229 Sum_probs=214.2
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccc--cccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGS--IPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
++|++|++++|+++...+..+..+.+ |++|++++|+++.. .+..+..+++|++|+|++|.++ .+|..+..+++|++
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQ-LTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTT-CSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCEEECCCCccCccCHhHhhcccc-CCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 45666777777766444444556554 77777777777632 3566677889999999999998 56777889999999
Q ss_pred EEeccccccCccc-ccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccC-CCCCCccCCCCCcEEEccCC
Q 036879 457 LYLQHNKLQGSIT-TDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTS-VIPSSLWSLRDILNVNLSSN 534 (1029)
Q Consensus 457 L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N 534 (1029)
|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|++++ ..|..+..+++|+.|++++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 9999999987766 678889999999999999998889999999999999999999987 68889999999999999999
Q ss_pred cccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCC-CCCEEeCcCCcccCcCc
Q 036879 535 SLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLT-SLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 535 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~ 613 (1029)
++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..+
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99988899999999999999999999987777899999999999999999999999999884 99999999999986533
Q ss_pred --hhhhcccccceeeccCCCCcCCCCC
Q 036879 614 --NSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 614 --~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
.....+...+.+.+..+.+.|..|.
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hHHHHHHHHhhhhhhccccccccCCch
Confidence 2234456666777788888887665
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=7.7e-29 Score=271.19 Aligned_cols=251 Identities=23% Similarity=0.243 Sum_probs=136.7
Q ss_pred ceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEecc
Q 036879 382 RKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQH 461 (1029)
Q Consensus 382 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (1029)
+.++++++.++ .+|..+. ..+++|++++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCCC---CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 56777777766 3444332 2366666666666655555666666666666666666655566666666666666666
Q ss_pred cc-ccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcC
Q 036879 462 NK-LQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTL 540 (1029)
Q Consensus 462 N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 540 (1029)
|. ++...+..|..+++ |++|++++|++++..|..|..+++|++|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGR------------------------LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp CTTCCCCCTTTTTTCTT------------------------CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCccccCHHHhcCCcC------------------------CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 65 55444444444444 455555555544444444555555555555555555444
Q ss_pred CccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhccc
Q 036879 541 PVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALS 620 (1029)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 620 (1029)
+..++.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 44455555555555555555544444455555555555555555555555555555555555555555554445555555
Q ss_pred ccceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCCC
Q 036879 621 LLKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 621 ~L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
+|+.|++++|++.+..+....+.++.......+...|..|
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 5555555555555544332222333333444444455444
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.7e-28 Score=283.09 Aligned_cols=251 Identities=21% Similarity=0.236 Sum_probs=229.1
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
...++.++++++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457888888998 6676664 6899999999999988889999999999999999999999999999999999999999
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccC-CcccCcCCccccccccccEEEccCCcCCCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSS-NSLNGTLPVEIGNLKVVTKIDLSRNDLSGEI 564 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 564 (1029)
|+++...+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++ |.++...+..|.++++|+.|+|++|.++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 999988888999999999999999999998888999999999999999 5566556668999999999999999998 45
Q ss_pred CccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC-CCCC
Q 036879 565 PSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPFT 643 (1029)
Q Consensus 565 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~ 643 (1029)
| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+.. ..+.
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 5 4889999999999999999988999999999999999999999999999999999999999999999876653 5678
Q ss_pred ccCcccccCCCCCCCCCC
Q 036879 644 NLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 644 ~l~~~~~~~n~~~c~~~~ 661 (1029)
++..+.+.+|||.|+|..
T Consensus 280 ~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 280 HLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TCCEEECCSSCEECSSTT
T ss_pred CCCEEEcCCCCccCCCCc
Confidence 888999999999999953
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.8e-28 Score=283.19 Aligned_cols=251 Identities=21% Similarity=0.232 Sum_probs=228.9
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
...++.+++.++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456888888888 5676554 6899999999999988899999999999999999999999999999999999999999
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccC-CcccCcCCccccccccccEEEccCCcCCCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSS-NSLNGTLPVEIGNLKVVTKIDLSRNDLSGEI 564 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 564 (1029)
|+++...+..|..+++|++|+|++|+++++.+..|..+++|+.|++++ |.++...+..|.++++|+.|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 999988889999999999999999999988888999999999999999 566655566799999999999999999854
Q ss_pred CccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC-CCCC
Q 036879 565 PSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG-GPFT 643 (1029)
Q Consensus 565 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~ 643 (1029)
| .+..+++|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|+.|+|++|++++.++.. ..+.
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 5889999999999999999988999999999999999999999999999999999999999999999766653 5678
Q ss_pred ccCcccccCCCCCCCCCC
Q 036879 644 NLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 644 ~l~~~~~~~n~~~c~~~~ 661 (1029)
++..+.+.+|||.|+|..
T Consensus 291 ~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 291 YLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TCCEEECCSSCEECSTTT
T ss_pred CCCEEEccCCCcCCCCCc
Confidence 888999999999999963
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.6e-28 Score=263.77 Aligned_cols=253 Identities=21% Similarity=0.242 Sum_probs=171.4
Q ss_pred cceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccc
Q 036879 342 LTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIP 421 (1029)
Q Consensus 342 L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p 421 (1029)
-+.++.+++.+.. +|.. -.++|++|++++|.+++..+..+..+.+ |++|++++|++++..|
T Consensus 13 ~~~~~c~~~~l~~-ip~~-----------------~~~~l~~L~l~~n~i~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~ 73 (285)
T 1ozn_A 13 KVTTSCPQQGLQA-VPVG-----------------IPAASQRIFLHGNRISHVPAASFRACRN-LTILWLHSNVLARIDA 73 (285)
T ss_dssp SCEEECCSSCCSS-CCTT-----------------CCTTCSEEECTTSCCCEECTTTTTTCTT-CCEEECCSSCCCEECT
T ss_pred CeEEEcCcCCccc-CCcC-----------------CCCCceEEEeeCCcCCccCHHHcccCCC-CCEEECCCCccceeCH
Confidence 3678888888873 3422 2468999999999999888888988887 9999999999998889
Q ss_pred cccCCcCcCcEEEecCcc-ccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccccccccc
Q 036879 422 SEIGNLNNLTTLHLETNE-LTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLI 500 (1029)
Q Consensus 422 ~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 500 (1029)
..|.++++|++|+|++|. +++..|..|..+++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..++
T Consensus 74 ~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 153 (285)
T 1ozn_A 74 AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG 153 (285)
T ss_dssp TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCC
Confidence 999999999999999997 8877788999999999999999999866665565555555555555555544444455555
Q ss_pred ccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccc
Q 036879 501 SLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLA 580 (1029)
Q Consensus 501 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 580 (1029)
+|++|+|++|+++++.+ ..+..+++|+.|++++|.+++..|..|..+++|+.|+|+
T Consensus 154 ~L~~L~l~~n~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 209 (285)
T 1ozn_A 154 NLTHLFLHGNRISSVPE------------------------RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209 (285)
T ss_dssp TCCEEECCSSCCCEECT------------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CccEEECCCCcccccCH------------------------HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCC
Confidence 55555555555544433 345555555555555555555555555555556666666
Q ss_pred cccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 581 DNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 581 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
+|++++..+..+..+++|++|+|++|+++...+. ..-...++.+..+.|.+.|..|.
T Consensus 210 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 210 ANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp SSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESG
T ss_pred CCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCch
Confidence 6665544444555666666666666666543321 11223344455566666665554
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.5e-29 Score=280.42 Aligned_cols=266 Identities=21% Similarity=0.225 Sum_probs=146.0
Q ss_pred CCCCCCCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCccc-ccCCccccc-------cccCCce
Q 036879 29 WSTNTSVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSF-SGTLPIQLS-------NLRRLKY 100 (1029)
Q Consensus 29 w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~ 100 (1029)
|.....|+.|..+........++.++++++.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++
T Consensus 24 ~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~ 99 (312)
T 1wwl_A 24 WSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQE 99 (312)
T ss_dssp GGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCE
T ss_pred hHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccE
Confidence 43333444444443332333444555555555 445444332 55555555555 233444443 4555555
Q ss_pred eecccccccCCCCCCcC--CCCCccceeccccccccCCCcccccCc-----cccCeEeccCCcCcccCCccccCCCcCcc
Q 036879 101 LSFRSNNFSSIEIPPWL--DSFPKLEHLYLDGNSFIGTIPPSICNI-----SSLLTLDLSFNQLQGHVPSSILNIPSLLA 173 (1029)
Q Consensus 101 L~l~~N~l~~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 173 (1029)
|+|++|+++. .+|..+ ..+++|++|+|++|++++. |+.++.+ ++|++|+|++|++++..|..|.++++|++
T Consensus 100 L~L~~n~l~~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 100 LTLENLEVTG-TAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEBCBS-CCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEccCCcccc-hhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 5555555543 234333 4555555555555555533 4444444 45555555555555444455555555555
Q ss_pred cccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCccc--ccccccceEEcccccccCC--CCc-cccc
Q 036879 174 IDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTL--FECKQLKILSLSVNNFIGS--IPR-EIGN 248 (1029)
Q Consensus 174 L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~--~p~-~~~~ 248 (1029)
|++++|++.+..+ .|..+ ..+++|++|+|++|++++. ++. .+.+
T Consensus 178 L~Ls~N~l~~~~~-------------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 226 (312)
T 1wwl_A 178 LDLSDNPELGERG-------------------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAA 226 (312)
T ss_dssp EECCSCTTCHHHH-------------------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHT
T ss_pred EECCCCCcCcchH-------------------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhc
Confidence 5555554432100 12222 5566777777777766521 111 1122
Q ss_pred cccccceeecccccccccCcccEEEccCCcccCCCC-CCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcc
Q 036879 249 ITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIP-PEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNR 327 (1029)
Q Consensus 249 l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~ 327 (1029)
+++|++|+|++|+|++..| ..+..+++|++|+|++|.++ .+|..++ ++|++|+|++|+
T Consensus 227 -----------------l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~---~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 227 -----------------RVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP---AKLSVLDLSYNR 285 (312)
T ss_dssp -----------------TCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC---SEEEEEECCSSC
T ss_pred -----------------CCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc---CCceEEECCCCC
Confidence 2455677888888877665 45666788888888888886 7777665 678888888888
Q ss_pred cCCCCCcccccccccceecCCCccccC
Q 036879 328 LTGPIPSSISNASMLTLIDMPYNLFSG 354 (1029)
Q Consensus 328 l~~~~p~~l~~l~~L~~L~ls~N~l~~ 354 (1029)
|++. |. +..+++|++|++++|.+++
T Consensus 286 l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 286 LDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8865 44 7777777777777777653
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.2e-29 Score=298.23 Aligned_cols=237 Identities=19% Similarity=0.214 Sum_probs=167.3
Q ss_pred cccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 377 NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 377 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
.+++|+.|+|++|.+++..|..|..++. |++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTT-CCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCC-CCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 4457888888888887777777777765 7788888888776555 7777788888888887774322 267788
Q ss_pred EEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCcc-CCCCCcEEEccCCc
Q 036879 457 LYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLW-SLRDILNVNLSSNS 535 (1029)
Q Consensus 457 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~ 535 (1029)
|++++|.+++..+.. +++|+.|++++|.+++..|..|+.+++|++|+|++|.+++..|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 888888777665543 46677777777777777777777777777777777777776666665 57777777777777
Q ss_pred ccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc-CcCch
Q 036879 536 LNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS-GEIPN 614 (1029)
Q Consensus 536 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~ 614 (1029)
|++.. .+..+++|+.|+|++|.+++. |..|..+++|+.|+|++|+|++ +|..+..+++|+.|++++|.++ +.+|.
T Consensus 181 l~~~~--~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred ccccc--ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 77542 233477777777777777743 3346777777777777777774 5666777777777777777776 55666
Q ss_pred hhhcccccceeecc
Q 036879 615 SLKALSLLKFLNLS 628 (1029)
Q Consensus 615 ~~~~l~~L~~L~l~ 628 (1029)
.+..++.|+.++++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 66666666666664
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.5e-29 Score=275.30 Aligned_cols=249 Identities=20% Similarity=0.200 Sum_probs=208.8
Q ss_pred cccccccceeeccCCcCCCCCCccccCchhhhcceeccccccc-cccccccC-------CcCcCcEEEecCccccccccc
Q 036879 375 LTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIK-GSIPSEIG-------NLNNLTTLHLETNELTGSIPK 446 (1029)
Q Consensus 375 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~ 446 (1029)
+...++|+.|++++|.+ .+|..+... ++.|++++|+++ ..+|..+. ++++|++|+|++|++++..|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34667899999999998 667665543 888999999994 45666555 689999999999999988888
Q ss_pred cc--cCCCCCCEEEeccccccCcccccccCC-----CCCcEEecCCCcccCccccccccccccceeeccCccccCC--CC
Q 036879 447 AI--GRLQKLQGLYLQHNKLQGSITTDLCGL-----RSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSV--IP 517 (1029)
Q Consensus 447 ~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~ 517 (1029)
.+ ..+++|++|+|++|++++. +..+..+ ++|++|++++|++.+..|..|+.+++|++|+|++|++.+. .+
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8899999999999999887 6777766 8999999999999988889999999999999999998764 23
Q ss_pred CC--ccCCCCCcEEEccCCcccC---cCCccccccccccEEEccCCcCCCCCC-ccccCcccccccccccccccccCCcc
Q 036879 518 SS--LWSLRDILNVNLSSNSLNG---TLPVEIGNLKVVTKIDLSRNDLSGEIP-SSIGDLKNMQHLSLADNKFQGSIPDS 591 (1029)
Q Consensus 518 ~~--~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~ 591 (1029)
.. +..+++|++|+|++|++++ .....+..+++|+.|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 33 3889999999999999983 222344678999999999999998775 56677899999999999999 77877
Q ss_pred ccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 592 LGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 592 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
+. ++|++|||++|+|++. |. +..+++|+.|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 76 8999999999999966 65 8899999999999999985
No 315
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.4e-29 Score=307.69 Aligned_cols=433 Identities=15% Similarity=0.083 Sum_probs=284.2
Q ss_pred cCCccccCCCcCcccccCCCcCc---ccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccc
Q 036879 160 HVPSSILNIPSLLAIDLSNNQFS---GPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVN 236 (1029)
Q Consensus 160 ~~p~~~~~l~~L~~L~ls~N~l~---~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 236 (1029)
.++..+..+++|+.|+++++... +..|..++... ...++..+..+++|++|+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~---------------------~~~l~~l~~~~~~L~~L~L~~~ 122 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYV---------------------TPWVTEISNNLRQLKSVHFRRM 122 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBC---------------------HHHHHHHHHHCTTCCEEEEESC
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccc---------------------hHHHHHHHhhCCCCCeEEeecc
Confidence 34455667888999999886532 12221111000 0001112235677777777777
Q ss_pred cccCCCCcccccc--ccccceeecccc-cc--------cccCcccEEEccCCcccCC----CCCCcccCCCCcEEEccCc
Q 036879 237 NFIGSIPREIGNI--TMLKGLYLVYTN-LT--------GEIQGLQVLALSSNRLTGV----IPPEIINISSLTVLSLTAN 301 (1029)
Q Consensus 237 ~l~~~~p~~~~~l--~~L~~L~l~~n~-l~--------~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N 301 (1029)
.+++..+..++.. .+|+.|++.+|. ++ ..+++|++|+|++|.+++. ++..+.++++|++|+|++|
T Consensus 123 ~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n 202 (592)
T 3ogk_B 123 IVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMT 202 (592)
T ss_dssp BCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTC
T ss_pred EecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeecc
Confidence 7666555556553 347777777665 22 2457888999999988765 3334567889999999999
Q ss_pred ccCC----CCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCccccccccccc
Q 036879 302 NLLG----NLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTN 377 (1029)
Q Consensus 302 ~l~~----~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~ 377 (1029)
.+.+ .++. ++..+++|++|+|++|.+.+ +|..+..+++|+.|+++..... .+. ......+..
T Consensus 203 ~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~~----------~~~~~~l~~ 268 (592)
T 3ogk_B 203 EFAKISPKDLET-IARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IGM----------PEKYMNLVF 268 (592)
T ss_dssp CCSSCCHHHHHH-HHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TTC----------TTSSSCCCC
T ss_pred CCCccCHHHHHH-HHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc--cch----------HHHHHHhhc
Confidence 8862 2222 23357899999999998886 6688888999999998863222 110 011233556
Q ss_pred ccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccc-cccCCcCcCcEEEecCccccc-cccccccCCCCCC
Q 036879 378 CKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIP-SEIGNLNNLTTLHLETNELTG-SIPKAIGRLQKLQ 455 (1029)
Q Consensus 378 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~ 455 (1029)
+++|+.|+++++.. ..+|..+..+++ |++|++++|.+++... ..+..+++|++|+|+ +.+.. .++..+..+++|+
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~-L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQ-IRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGG-CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCC
T ss_pred cccccccCccccch-hHHHHHHhhcCC-CcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCC
Confidence 78889999888643 356666666665 8899999988765444 346788899999998 44442 3444456788899
Q ss_pred EEEec-----------cccccCccccc-ccCCCCCcEEecCCCcccCcccccccc-ccccceeecc----CccccCC---
Q 036879 456 GLYLQ-----------HNKLQGSITTD-LCGLRSLSEFYSDGNELNGSLPQCLDS-LISLRTLSLG----FNRLTSV--- 515 (1029)
Q Consensus 456 ~L~L~-----------~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~--- 515 (1029)
+|+++ .|.++...... +..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 99998 35665443322 345788888888888888777777765 8888888885 6777753
Q ss_pred --CCCCccCCCCCcEEEccCC--cccCcCCcccc-ccccccEEEccCCcCCCC-CCccccCcccccccccccccccccC-
Q 036879 516 --IPSSLWSLRDILNVNLSSN--SLNGTLPVEIG-NLKVVTKIDLSRNDLSGE-IPSSIGDLKNMQHLSLADNKFQGSI- 588 (1029)
Q Consensus 516 --~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~- 588 (1029)
++..+.++++|+.|++++| .+++..+..+. .+++|+.|++++|++++. ++..+..+++|+.|+|++|++++..
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 2333666888888888743 36554444443 377888888888888753 3445567788888888888876543
Q ss_pred CccccCCCCCCEEeCcCCcccCcCchhh-hcccccceeeccCC
Q 036879 589 PDSLGGLTSLNFLDMSSNNLSGEIPNSL-KALSLLKFLNLSFN 630 (1029)
Q Consensus 589 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N 630 (1029)
+..+..+++|++|+|++|+++......+ ..++.+....+..+
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 3334567888888888888876543333 35566655555444
No 316
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=8.2e-30 Score=309.68 Aligned_cols=456 Identities=15% Similarity=0.113 Sum_probs=252.1
Q ss_pred CCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCccc---ccCCccccc------------cccCCc
Q 036879 35 VCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSF---SGTLPIQLS------------NLRRLK 99 (1029)
Q Consensus 35 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l---~~~~p~~~~------------~l~~L~ 99 (1029)
|++|.++.+.. ++ .+.+.. .....++..+..+++|+.|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--RE--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CC--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--cc--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45799995432 11 122221 12223344566788899999987532 134444433 789999
Q ss_pred eeecccccccCCCCCCcCCC-CCc-cceecccccc-ccC-CCcccccCccccCeEeccCCcCccc----CCccccCCCcC
Q 036879 100 YLSFRSNNFSSIEIPPWLDS-FPK-LEHLYLDGNS-FIG-TIPPSICNISSLLTLDLSFNQLQGH----VPSSILNIPSL 171 (1029)
Q Consensus 100 ~L~l~~N~l~~~~~p~~~~~-l~~-L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 171 (1029)
+|+|++|.++.. .+.++.. +++ |++|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|
T Consensus 116 ~L~L~~~~i~~~-~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 116 SVHFRRMIVSDL-DLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp EEEEESCBCCHH-HHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred eEEeeccEecHH-HHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999988752 2444544 344 9999999987 221 2334445789999999999998755 34456678999
Q ss_pred cccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCcccccccc
Q 036879 172 LAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITM 251 (1029)
Q Consensus 172 ~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 251 (1029)
+.|++++|.+++.... .++..+.++++|+.|++++|.+.+ +|..+.++++
T Consensus 195 ~~L~L~~n~~~~~~~~-----------------------------~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~ 244 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPK-----------------------------DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAAN 244 (592)
T ss_dssp CEEECTTCCCSSCCHH-----------------------------HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTT
T ss_pred cEEEeeccCCCccCHH-----------------------------HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhH
Confidence 9999999988632110 112334455666666666666553 4555555555
Q ss_pred ccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCC
Q 036879 252 LKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGP 331 (1029)
Q Consensus 252 L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~ 331 (1029)
|+.|+++....... ....+..+..+++|+.|+++++.. +.+|..+. .+++|++|+|++|.+++.
T Consensus 245 L~~L~l~~~~~~~~--------------~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~-~~~~L~~L~Ls~~~l~~~ 308 (592)
T 3ogk_B 245 LEEFCGGSLNEDIG--------------MPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFP-FAAQIRKLDLLYALLETE 308 (592)
T ss_dssp CCEEEECBCCCCTT--------------CTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGG-GGGGCCEEEETTCCCCHH
T ss_pred HHhhcccccccccc--------------hHHHHHHhhccccccccCccccch-hHHHHHHh-hcCCCcEEecCCCcCCHH
Confidence 55544432111000 011222333344444444444322 13333222 244444444444443322
Q ss_pred CC-cccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccC-----------CcCCCCCCccc
Q 036879 332 IP-SSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSE-----------NPLSGVLPISI 399 (1029)
Q Consensus 332 ~p-~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~-----------N~l~~~~p~~~ 399 (1029)
.. ..+..+++|+.|+++ +.+... ........+++|++|++++ |.+++.....+
T Consensus 309 ~~~~~~~~~~~L~~L~L~-~~~~~~--------------~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l 373 (592)
T 3ogk_B 309 DHCTLIQKCPNLEVLETR-NVIGDR--------------GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIAL 373 (592)
T ss_dssp HHHHHHTTCTTCCEEEEE-GGGHHH--------------HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHH
T ss_pred HHHHHHHhCcCCCEEecc-CccCHH--------------HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHH
Confidence 11 223444444444444 222110 0001122445555555552 33332211111
Q ss_pred -cCchhhhcceeccccccccccccccCC-cCcCcEEEec----Ccccccc-----ccccccCCCCCCEEEeccc--cccC
Q 036879 400 -GNLSNAMDVLYLSACNIKGSIPSEIGN-LNNLTTLHLE----TNELTGS-----IPKAIGRLQKLQGLYLQHN--KLQG 466 (1029)
Q Consensus 400 -~~l~~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~L~~N--~l~~ 466 (1029)
..+++ |++|+++.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+..+++|++|++++| .+++
T Consensus 374 ~~~~~~-L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~ 452 (592)
T 3ogk_B 374 AQGCQE-LEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD 452 (592)
T ss_dssp HHHCTT-CSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH
T ss_pred HhhCcc-CeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH
Confidence 11222 666666666666555555544 6677777775 5666642 3334566777777777643 2544
Q ss_pred ccccccc-CCCCCcEEecCCCcccC-ccccccccccccceeeccCccccCC-CCCCccCCCCCcEEEccCCcccCcCCcc
Q 036879 467 SITTDLC-GLRSLSEFYSDGNELNG-SLPQCLDSLISLRTLSLGFNRLTSV-IPSSLWSLRDILNVNLSSNSLNGTLPVE 543 (1029)
Q Consensus 467 ~~~~~~~-~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 543 (1029)
.....+. .+++|++|++++|++++ ..+..+.++++|++|+|++|.+++. ++..+..+++|+.|+|++|++++.....
T Consensus 453 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~ 532 (592)
T 3ogk_B 453 LGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDL 532 (592)
T ss_dssp HHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTG
T ss_pred HHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHH
Confidence 4433333 36777778887777765 3344557778888888888887643 3334456788888888888887653333
Q ss_pred c-cccccccEEEccCC
Q 036879 544 I-GNLKVVTKIDLSRN 558 (1029)
Q Consensus 544 ~-~~l~~L~~L~Ls~N 558 (1029)
+ ..++.+....+..+
T Consensus 533 l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 533 MQMARPYWNIELIPSR 548 (592)
T ss_dssp GGGCCTTEEEEEECCC
T ss_pred HHHhCCCcEEEEecCc
Confidence 3 34566666555544
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.4e-28 Score=271.33 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=208.4
Q ss_pred ccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCC
Q 036879 376 TNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQ 455 (1029)
Q Consensus 376 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 455 (1029)
..+++|++|+|++|++++..|..+..+.+ |++|++++|++++..+ |..+++|++|+|++|+|++. + ..++|+
T Consensus 31 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~ 102 (317)
T 3o53_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIE 102 (317)
T ss_dssp TTGGGCSEEECTTSCCCCCCHHHHTTCTT-CCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCC
T ss_pred ccCCCCCEEECcCCccCcCCHHHhhCCCc-CCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcC
Confidence 35668888888888888777778888876 8999999999886655 88899999999999999853 2 348999
Q ss_pred EEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCcc-CCCCCcEEEccCC
Q 036879 456 GLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLW-SLRDILNVNLSSN 534 (1029)
Q Consensus 456 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N 534 (1029)
+|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|+|++|++++..+..+. .+++|+.|+|++|
T Consensus 103 ~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 103 TLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp EEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 9999999998766554 57899999999999988888999999999999999999988777764 7899999999999
Q ss_pred cccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc-CcCc
Q 036879 535 SLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS-GEIP 613 (1029)
Q Consensus 535 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~ 613 (1029)
.+++. + ....+++|++|+|++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|
T Consensus 180 ~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~ 255 (317)
T 3o53_A 180 FIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (317)
T ss_dssp CCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHH
T ss_pred cCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHH
Confidence 99865 3 23458999999999999985 4556899999999999999999 57888999999999999999998 7888
Q ss_pred hhhhcccccceeecc-CCCCcCCCC
Q 036879 614 NSLKALSLLKFLNLS-FNGLQGQVP 637 (1029)
Q Consensus 614 ~~~~~l~~L~~L~l~-~N~l~~~~~ 637 (1029)
..+..+++|+.|+++ .+.++|..|
T Consensus 256 ~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 256 DFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred HHHhccccceEEECCCchhccCCch
Confidence 899999999999998 445665444
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=8.5e-28 Score=266.97 Aligned_cols=255 Identities=20% Similarity=0.202 Sum_probs=118.6
Q ss_pred EEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccc
Q 036879 295 VLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTS 374 (1029)
Q Consensus 295 ~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~ 374 (1029)
.++++.+.+. ..+..++..+++|++|+|++|++++..|..|..+++|+.|++++|.+.+..+
T Consensus 14 i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----------------- 75 (317)
T 3o53_A 14 IEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD----------------- 75 (317)
T ss_dssp EESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-----------------
T ss_pred Eeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-----------------
Confidence 3444444443 3334444445555555555555555555555555555555555555543211
Q ss_pred cccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCC
Q 036879 375 LTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKL 454 (1029)
Q Consensus 375 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 454 (1029)
+..+++|++|++++|++++..+ .+ .|++|++++|++++..+.. +++|++|+|++|++++..+..+..+++|
T Consensus 76 ~~~l~~L~~L~Ls~n~l~~l~~-----~~-~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L 146 (317)
T 3o53_A 76 LESLSTLRTLDLNNNYVQELLV-----GP-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV 146 (317)
T ss_dssp ETTCTTCCEEECCSSEEEEEEE-----CT-TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSE
T ss_pred hhhcCCCCEEECcCCccccccC-----CC-CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCC
Confidence 2344555555555555542211 11 2444444444444333322 3445555555555554444455555555
Q ss_pred CEEEeccccccCccccccc-CCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccC
Q 036879 455 QGLYLQHNKLQGSITTDLC-GLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSS 533 (1029)
Q Consensus 455 ~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 533 (1029)
++|+|++|++++..+..+. .+++|++|++++|.+++..+ ...+++|++|+|++|+++++.+ .+..+++|+.|+|++
T Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~ 223 (317)
T 3o53_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRN 223 (317)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTT
T ss_pred CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcC
Confidence 5555555555444333332 33444444444444432211 1124445555555555543322 244445555555555
Q ss_pred CcccCcCCccccccccccEEEccCCcCC-CCCCccccCcccccccccc
Q 036879 534 NSLNGTLPVEIGNLKVVTKIDLSRNDLS-GEIPSSIGDLKNMQHLSLA 580 (1029)
Q Consensus 534 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~ 580 (1029)
|+++ .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+++
T Consensus 224 N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 224 NKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp SCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred Cccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 5554 23444444455555555555554 3344444445555555554
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.3e-28 Score=287.33 Aligned_cols=182 Identities=16% Similarity=0.096 Sum_probs=130.8
Q ss_pred eccCcceEEEEEEe-cCCcEEEEEEeeccc----------chhhHHHHHHHHHHhcC-CCCceEEEEEEEecCCeEEEEE
Q 036879 746 LGKGSFGSVYKGTL-SDGMQIAVKVFNLEL----------EGTLRSFDAECEILGSI-RHRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 746 lg~G~fg~V~~~~~-~~~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 813 (1029)
.+.|++|.+..++. .-|+.||+|.+.+.. +...+.|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 56677776666543 368899999997542 22345799999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCC
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETS 893 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 893 (1029)
||++|++|.+++.+ ...++.. +|+.||+.||+|+| ++|||||||||+|||++.+|.+||+|||+|+.......
T Consensus 322 Eyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999965 4456654 58899999999999 78899999999999999999999999999987654332
Q ss_pred ceeccccCCccccCccCC---CCCCcchhHHHHHHHHHhcCCCCC
Q 036879 894 MTQTQTLATIGYMAPEWK---LSRKGDVYSYGIILMETFTKKKPT 935 (1029)
Q Consensus 894 ~~~~~~~gt~~y~aPE~~---~~~~~DvwSlGvil~elltg~~p~ 935 (1029)
.....+||++|||||++ ...++|+||+|++++++.++..|+
T Consensus 395 -~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 -WPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH
T ss_pred -cccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh
Confidence 23346799999999996 455799999999988887765553
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.9e-25 Score=267.47 Aligned_cols=268 Identities=28% Similarity=0.364 Sum_probs=162.6
Q ss_pred cccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecC
Q 036879 268 GLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDM 347 (1029)
Q Consensus 268 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 347 (1029)
+++.|++++|.|+ .+|..+. ++|++|+|++|++. .+|. .+++|++|+|++|+|++ +|. .+++|++|++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 5778999999888 5666655 78888888888886 6776 36788888888888874 333 4556666666
Q ss_pred CCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCc
Q 036879 348 PYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNL 427 (1029)
Q Consensus 348 s~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l 427 (1029)
++|.+++. |. .+++|+.|++++|++++ +|.. +
T Consensus 109 s~N~l~~l-~~------------------~l~~L~~L~L~~N~l~~-lp~~----------------------------l 140 (622)
T 3g06_A 109 FSNPLTHL-PA------------------LPSGLCKLWIFGNQLTS-LPVL----------------------------P 140 (622)
T ss_dssp CSCCCCCC-CC------------------CCTTCCEEECCSSCCSC-CCCC----------------------------C
T ss_pred cCCcCCCC-CC------------------CCCCcCEEECCCCCCCc-CCCC----------------------------C
Confidence 66665532 11 12445555555555542 2221 2
Q ss_pred CcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeec
Q 036879 428 NNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSL 507 (1029)
Q Consensus 428 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 507 (1029)
++|++|+|++|+|++ +|. .+++|+.|++++|.+++.. ..+++|+.|++++|.+++ +|. .+++|+.|++
T Consensus 141 ~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L 208 (622)
T 3g06_A 141 PGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWA 208 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCC-CCC---ccchhhEEEC
Confidence 445555555555542 222 1234555555555554322 223444444444444443 222 1356666677
Q ss_pred cCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccccccc
Q 036879 508 GFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGS 587 (1029)
Q Consensus 508 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 587 (1029)
++|.++.+ |. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .
T Consensus 209 ~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 209 YNNRLTSL-PA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp CSSCCSSC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-S
T ss_pred cCCccccc-CC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-c
Confidence 77776643 22 23667777777777774 44 34567777777777776 3444 4567777777777777 5
Q ss_pred CCccccCCCCCCEEeCcCCcccCcCchhhhccc
Q 036879 588 IPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALS 620 (1029)
Q Consensus 588 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 620 (1029)
+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 677777777777777777777777776666554
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=273.12 Aligned_cols=243 Identities=16% Similarity=0.186 Sum_probs=209.2
Q ss_pred hhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecC
Q 036879 405 AMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSD 484 (1029)
Q Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 484 (1029)
.|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 49999999999999889999999999999999999997665 9999999999999999986553 3899999999
Q ss_pred CCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCcccc-ccccccEEEccCCcCCCC
Q 036879 485 GNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIG-NLKVVTKIDLSRNDLSGE 563 (1029)
Q Consensus 485 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 563 (1029)
+|.+++..+.. +++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 99999877654 57899999999999999999999999999999999999998888886 799999999999999966
Q ss_pred CCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC-CCCC-CCC
Q 036879 564 IPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG-QVPH-GGP 641 (1029)
Q Consensus 564 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~-~~~ 641 (1029)
|. +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.+ .+|. ...
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred -cc-cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 32 44689999999999999964 4559999999999999999995 67789999999999999999984 3322 233
Q ss_pred CCccCccccc-------CCCCCCCCCC
Q 036879 642 FTNLSSQSFV-------GNKGLCGAPE 661 (1029)
Q Consensus 642 ~~~l~~~~~~-------~n~~~c~~~~ 661 (1029)
+..+..+... +|++.|.++.
T Consensus 261 l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 261 NQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp CHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred CCCCcEEeccccccccCCCcccccCCc
Confidence 4455555554 7888888763
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=8.9e-26 Score=244.54 Aligned_cols=212 Identities=22% Similarity=0.289 Sum_probs=178.8
Q ss_pred CCCCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCC
Q 036879 32 NTSVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSI 111 (1029)
Q Consensus 32 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 111 (1029)
+.++|.|.|+.|.+. ..++.++++++++. .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+++.+
T Consensus 1 ~~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 1 NEALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CCccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 358999999888754 34678999999998 7888765 6899999999999977777899999999999999999953
Q ss_pred CCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCC
Q 036879 112 EIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNT 191 (1029)
Q Consensus 112 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 191 (1029)
. +..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++.++..+..
T Consensus 77 ~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 77 P-AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp C-TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred C-hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 2 345688999999999999999766677899999999999999999877888999999999999999999887765432
Q ss_pred CCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceee
Q 036879 192 SPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYL 257 (1029)
Q Consensus 192 ~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 257 (1029)
..+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++
T Consensus 156 ---------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 156 ---------LTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp ---------CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ---------CcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 236788889999999887888999999999999999999766666777766664333
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.4e-25 Score=244.02 Aligned_cols=210 Identities=22% Similarity=0.207 Sum_probs=152.3
Q ss_pred cCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeecc
Q 036879 429 NLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLG 508 (1029)
Q Consensus 429 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 508 (1029)
+|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45556666666554444455556666666666666655555556666666666666666666666677777777777777
Q ss_pred CccccCCCCCCccCCCCCcEEEccCCcccCc-CCccccccccccEEEccCCcCCCCCCccccCccccc----cccccccc
Q 036879 509 FNRLTSVIPSSLWSLRDILNVNLSSNSLNGT-LPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQ----HLSLADNK 583 (1029)
Q Consensus 509 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~ 583 (1029)
+|++++..+..+..+++|+.|++++|++++. +|..++.+++|+.|++++|++++..+..|..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7777776666777788888888888888753 477888888888888888888877777777777777 78888998
Q ss_pred ccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCC
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG 639 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 639 (1029)
+++..+..+. ..+|++|+|++|++++..+..+..+++|+.|++++|+++|.+|..
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 8865555554 447999999999998777777888899999999999888876643
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.7e-24 Score=234.55 Aligned_cols=205 Identities=23% Similarity=0.290 Sum_probs=126.4
Q ss_pred CcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccC
Q 036879 430 LTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGF 509 (1029)
Q Consensus 430 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 509 (1029)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|++++|.++...+..|..+++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 344444444444 2333222 3444555555555444444444445555555555555544455556666666666666
Q ss_pred ccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCC
Q 036879 510 NRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIP 589 (1029)
Q Consensus 510 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 589 (1029)
|+++++.+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 66666666666666667777777777766666666677777777777777765555556777777777777777776555
Q ss_pred ccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 590 DSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 590 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
..|..+++|++|+|++|++++..+..+..+++|+.|++++|++.+..+
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 667777777777777777776666667777777777777776665443
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=4.2e-28 Score=294.78 Aligned_cols=391 Identities=16% Similarity=0.132 Sum_probs=221.9
Q ss_pred cccccceEEcccccccCCCCcccc-ccccccceeeccc-ccc--------cccCcccEEEccCCcccCCCCCCcc----c
Q 036879 224 ECKQLKILSLSVNNFIGSIPREIG-NITMLKGLYLVYT-NLT--------GEIQGLQVLALSSNRLTGVIPPEII----N 289 (1029)
Q Consensus 224 ~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~n-~l~--------~~l~~L~~L~Ls~N~l~~~~p~~~~----~ 289 (1029)
.+++|++|+|++|.+++..+..+. .+++|+.|++.+| .++ ..+++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 345555555555555544444443 4555555555555 222 1456777888888887765544443 5
Q ss_pred CCCCcEEEccCcccCCCCCc----hhhhcccccceEeecCc-ccCCCCCcccccccccceecCCCccccCCCCCCCCCCC
Q 036879 290 ISSLTVLSLTANNLLGNLPS----NIGHSLPNLQQLILGGN-RLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCH 364 (1029)
Q Consensus 290 l~~L~~L~Ls~N~l~~~lp~----~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 364 (1029)
+++|++|+|++|. +.++. .+...+++|++|+|++| .+.+ ++..+..+++|+.|+++.+... ..+..+
T Consensus 183 ~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~-~~~~~~---- 254 (594)
T 2p1m_B 183 YTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE-VRPDVY---- 254 (594)
T ss_dssp CCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC-CCHHHH----
T ss_pred CCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc-cchhhH----
Confidence 6689999999886 23332 22234689999999988 4443 7777888888888886654310 000000
Q ss_pred CCccccccccccccccccee-eccCCcCCCCCCccccCchhhhcceecccccccccccc-ccCCcCcCcEEEecCccccc
Q 036879 365 PYDELGFLTSLTNCKDLRKL-ILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPS-EIGNLNNLTTLHLETNELTG 442 (1029)
Q Consensus 365 ~~~~~~~~~~l~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 442 (1029)
......+.++++|+.| .+.+... +.++..+..+++ |+.|++++|.+++.... .+..+++|++|++++| ++.
T Consensus 255 ----~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~-L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~ 327 (594)
T 2p1m_B 255 ----SGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSR-LTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED 327 (594)
T ss_dssp ----HHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTT-CCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH
T ss_pred ----HHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhCC-CCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH
Confidence 0111235567777777 3433222 123333333333 77777777776643222 2456777888888877 432
Q ss_pred c-ccccccCCCCCCEEEecc---------ccccCccccccc-CCCCCcEEecCCCcccCccccccc-cccccceeecc--
Q 036879 443 S-IPKAIGRLQKLQGLYLQH---------NKLQGSITTDLC-GLRSLSEFYSDGNELNGSLPQCLD-SLISLRTLSLG-- 508 (1029)
Q Consensus 443 ~-~~~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls-- 508 (1029)
. ++.....+++|++|++++ +.++......+. ++++|+.|.+..|.+++.....+. .+++|+.|+++
T Consensus 328 ~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 328 AGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecc
Confidence 2 222333577788887733 444433333333 366777777777777655555554 46777777777
Q ss_pred C----ccccCCC-----CCCccCCCCCcEEEccCCcccCcCCccccc-cccccEEEccCCcCCCCCCccc-cCccccccc
Q 036879 509 F----NRLTSVI-----PSSLWSLRDILNVNLSSNSLNGTLPVEIGN-LKVVTKIDLSRNDLSGEIPSSI-GDLKNMQHL 577 (1029)
Q Consensus 509 ~----N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 577 (1029)
+ |.+++.. +..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L 486 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKL 486 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEE
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEE
Confidence 3 4454221 11245566777777766 555444444444 6667777777777665444444 456777777
Q ss_pred ccccccccccCCc-cccCCCCCCEEeCcCCcccCcCchhh-hcccccceeeccCC
Q 036879 578 SLADNKFQGSIPD-SLGGLTSLNFLDMSSNNLSGEIPNSL-KALSLLKFLNLSFN 630 (1029)
Q Consensus 578 ~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N 630 (1029)
+|++|++++.... ....+++|++|++++|+++......+ ..+++|+...+..+
T Consensus 487 ~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~ 541 (594)
T 2p1m_B 487 EIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER 541 (594)
T ss_dssp EEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSS
T ss_pred ECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 7777776544333 23346677777777776653333333 34555555444444
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.2e-24 Score=236.75 Aligned_cols=226 Identities=21% Similarity=0.224 Sum_probs=195.2
Q ss_pred eeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccc
Q 036879 383 KLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHN 462 (1029)
Q Consensus 383 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 462 (1029)
.++.++..+. .+|..+. ..+++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 4556666665 4555443 34889999999999877778999999999999999999777778999999999999999
Q ss_pred cccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCC-CCCCccCCCCCcEEEccCCcccCcCC
Q 036879 463 KLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSV-IPSSLWSLRDILNVNLSSNSLNGTLP 541 (1029)
Q Consensus 463 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p 541 (1029)
++++..+..|.++++|++|++++|.+.+..+..+..+++|++|++++|+++++ +|..|..+++|+.|+|++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99988888999999999999999999988888899999999999999999875 58899999999999999999998888
Q ss_pred cccccccccc----EEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCc
Q 036879 542 VEIGNLKVVT----KIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 542 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
..+..+++|+ .|++++|.+++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8888888888 899999999966555554 4589999999999997777778999999999999999997554
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.3e-24 Score=235.49 Aligned_cols=204 Identities=24% Similarity=0.257 Sum_probs=136.4
Q ss_pred cCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccc
Q 036879 424 IGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLR 503 (1029)
Q Consensus 424 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 503 (1029)
+.++++++++++++|.++ .+|..+. ++++.|+|++|.+++..+..|..+++|+.|++++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 567788888888888888 4555543 5788888888888877777777777777777777777654332 5667777
Q ss_pred eeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccc
Q 036879 504 TLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 504 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 583 (1029)
+|+|++|+++ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777776 345566666666667776666666555666666666666666666665555556666666666666666
Q ss_pred ccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 66544445566666666666666666 445555555556666665555554
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=1.5e-28 Score=298.76 Aligned_cols=461 Identities=14% Similarity=0.096 Sum_probs=218.5
Q ss_pred CCceeeEEEcCCCCceEEEecccccccccCCc-cCCCCcCCCeEeccCccccc---CCcc------------ccccccCC
Q 036879 35 VCNWFGVTCSPRHRRVTALNLAYMGLLGTIPP-ELGNLSFLSLLNVTNNSFSG---TLPI------------QLSNLRRL 98 (1029)
Q Consensus 35 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~-~~~~l~~L~~L~l~~n~l~~---~~p~------------~~~~l~~L 98 (1029)
|++|.++.. .....++++... +..|. .+..+++|+.|+|+++.... ..|. .+..+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 557999821 223345554432 22332 34567888999998875321 2221 23457788
Q ss_pred ceeecccccccCCCCCCcCC-CCCccceeccccc-cccCC-CcccccCccccCeEeccCCcCcccCCcccc----CCCcC
Q 036879 99 KYLSFRSNNFSSIEIPPWLD-SFPKLEHLYLDGN-SFIGT-IPPSICNISSLLTLDLSFNQLQGHVPSSIL----NIPSL 171 (1029)
Q Consensus 99 ~~L~l~~N~l~~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L 171 (1029)
++|+|++|.++... +..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|
T Consensus 108 ~~L~L~~~~~~~~~-~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L 186 (594)
T 2p1m_B 108 EEIRLKRMVVTDDC-LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSL 186 (594)
T ss_dssp CEEEEESCBCCHHH-HHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCC
T ss_pred CeEEeeCcEEcHHH-HHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcC
Confidence 88888888776432 23333 5778888888888 44422 445555788888888888887654433333 55677
Q ss_pred cccccCCCcCcccCCCCCCCCCcccccccccccchhccccc-cccCCCCcccccccccceEEcccc-------cccCCCC
Q 036879 172 LAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYN-QLSGQIPSTLFECKQLKILSLSVN-------NFIGSIP 243 (1029)
Q Consensus 172 ~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N-~l~~~~p~~l~~l~~L~~L~Ls~N-------~l~~~~p 243 (1029)
+.|++++|. .. .. ...+..+.-...+|++|++++| .+.+ +|..+..+++|+.|+++.+ .+.+ ++
T Consensus 187 ~~L~l~~~~-~~-~~----~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~ 258 (594)
T 2p1m_B 187 VSLNISCLA-SE-VS----FSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LS 258 (594)
T ss_dssp CEEECTTCC-SC-CC----HHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HH
T ss_pred cEEEecccC-Cc-CC----HHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HH
Confidence 777777775 10 00 0000111011123344444443 2221 3334444444444442222 1111 12
Q ss_pred ccccccccccceeecccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEee
Q 036879 244 REIGNITMLKGLYLVYTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLIL 323 (1029)
Q Consensus 244 ~~~~~l~~L~~L~l~~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L 323 (1029)
..+.++++|+.|. .+.+... +.++..+..+++|++|+|++|.+.+.....+...+++|++|++
T Consensus 259 ~~l~~~~~L~~Ls----------------~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l 321 (594)
T 2p1m_B 259 VALSGCKELRCLS----------------GFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWV 321 (594)
T ss_dssp HHHHTCTTCCEEE----------------CCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEE
T ss_pred HHHhcCCCccccc----------------CCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeC
Confidence 2233333333221 1111111 1122222234444444444444332212222223444444444
Q ss_pred cCcccCCC-CCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccC-
Q 036879 324 GGNRLTGP-IPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGN- 401 (1029)
Q Consensus 324 ~~N~l~~~-~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~- 401 (1029)
++| ++.. ++.....+++|+.|+++.+.-.| ..+.+.+++.....+..
T Consensus 322 ~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g------------------------------~~~~~~l~~~~l~~l~~~ 370 (594)
T 2p1m_B 322 LDY-IEDAGLEVLASTCKDLRELRVFPSEPFV------------------------------MEPNVALTEQGLVSVSMG 370 (594)
T ss_dssp EGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC------------------------------SSCSSCCCHHHHHHHHHH
T ss_pred cCc-cCHHHHHHHHHhCCCCCEEEEecCcccc------------------------------cccCCCCCHHHHHHHHHh
Confidence 444 2210 11111123333333332110000 00112222111111111
Q ss_pred chhhhcceeccccccccccccccC-CcCcCcEEEec--C----cccccc-----ccccccCCCCCCEEEeccccccCccc
Q 036879 402 LSNAMDVLYLSACNIKGSIPSEIG-NLNNLTTLHLE--T----NELTGS-----IPKAIGRLQKLQGLYLQHNKLQGSIT 469 (1029)
Q Consensus 402 l~~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~~~ 469 (1029)
++ .|+.|.++.|++++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|++|+|++ .++....
T Consensus 371 ~~-~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 371 CP-KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp CT-TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred ch-hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 11 244454444555443333333 35666666666 3 444421 122245566677777755 4444444
Q ss_pred ccccC-CCCCcEEecCCCcccCcccccc-ccccccceeeccCccccCCCCC-CccCCCCCcEEEccCCcccCcCCccc-c
Q 036879 470 TDLCG-LRSLSEFYSDGNELNGSLPQCL-DSLISLRTLSLGFNRLTSVIPS-SLWSLRDILNVNLSSNSLNGTLPVEI-G 545 (1029)
Q Consensus 470 ~~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~ 545 (1029)
..+.. +++|+.|++++|.+++..+..+ ..+++|++|+|++|.+++.... ....+++|+.|++++|.++......+ .
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~ 528 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQ 528 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHH
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHH
Confidence 44443 6667777777776655544444 5677788888888877543332 34457788888888887754333333 4
Q ss_pred ccccccEEEccCCcC
Q 036879 546 NLKVVTKIDLSRNDL 560 (1029)
Q Consensus 546 ~l~~L~~L~Ls~N~l 560 (1029)
.++.|+...+..+.-
T Consensus 529 ~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 529 KMPKLNVEVIDERGA 543 (594)
T ss_dssp HCTTEEEEEECSSSC
T ss_pred hCCCCEEEEecCCCc
Confidence 556776666665543
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=7.5e-24 Score=231.36 Aligned_cols=197 Identities=25% Similarity=0.299 Sum_probs=114.4
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
++.+++++|+++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|.+++..+. ..+++|+.|++++
T Consensus 12 l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~ 86 (290)
T 1p9a_G 12 HLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSH 86 (290)
T ss_dssp CCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCS
T ss_pred ccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCC
Confidence 555666666665 3333332 4556666666666655555566666666666666666544332 4555666666666
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIP 565 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 565 (1029)
|+++ .+|..+..+++|++|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 87 N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 165 (290)
T 1p9a_G 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA 165 (290)
T ss_dssp SCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT
T ss_pred CcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCH
Confidence 6665 445555566666666666666665555556666666666666666665555555566666666666666664444
Q ss_pred ccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc
Q 036879 566 SSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 566 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 166 ~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 166 GLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred HHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 44555666666666666665 45555555556666666666654
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4.1e-24 Score=231.61 Aligned_cols=220 Identities=22% Similarity=0.271 Sum_probs=177.2
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
+..+++..+.+.+. ..+..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++. ..+..+++|++|++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 34455555555533 234567788888888888773 33 477788888888888888753 3677788888888888
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIP 565 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 565 (1029)
|.+++..+..|..+++|++|+|++|+++++.+..|..+++|+.|++++|++++..+..++.+++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 88887778888888899999999999888888888888999999999999987777778889999999999999987777
Q ss_pred ccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 566 SSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 566 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
..|..+++|+.|+|++|++++..+..+..+++|++|+|++|.+++. ++.|+.|+++.|.++|.+|.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 7788899999999999999987777788899999999999988754 44688888999999988876
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=3.1e-24 Score=232.58 Aligned_cols=231 Identities=24% Similarity=0.286 Sum_probs=192.4
Q ss_pred cccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 377 NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 377 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
.+..+..+++.++.+.+.. ....+.. ++.|++++|.++. + ..+..+++|++|+|++|.+++ + ..+..+++|++
T Consensus 17 ~~~~l~~l~l~~~~~~~~~--~~~~l~~-L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~ 89 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDAV--TQNELNS-IDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTY 89 (272)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTT-CCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCE
T ss_pred hHHHHHHHHhcCccccccc--ccccccc-eeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCE
Confidence 3455666777777665432 2333443 7788888888873 2 357888999999999999985 3 36888999999
Q ss_pred EEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcc
Q 036879 457 LYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSL 536 (1029)
Q Consensus 457 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 536 (1029)
|+|++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+++++.+..|..+++|+.|++++|++
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 99999999988888889999999999999999988888899999999999999999988888889999999999999999
Q ss_pred cCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhh
Q 036879 537 NGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSL 616 (1029)
Q Consensus 537 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 616 (1029)
++..+..++.+++|+.|++++|++++..|..|..+++|+.|+|++|++.+. +++|++|+++.|+++|.+|..+
T Consensus 170 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 987777889999999999999999988888889999999999999988754 4578899999999999999888
Q ss_pred hcccc
Q 036879 617 KALSL 621 (1029)
Q Consensus 617 ~~l~~ 621 (1029)
+.++.
T Consensus 243 ~~~~~ 247 (272)
T 3rfs_A 243 GSVAP 247 (272)
T ss_dssp SCBCG
T ss_pred cccCC
Confidence 76643
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.1e-24 Score=258.18 Aligned_cols=181 Identities=15% Similarity=0.180 Sum_probs=140.8
Q ss_pred CCCceeccCcceEEEEEEecCCcEEEEEEeecccc--------hhhHHHHHHHHHHhcCCCCceEEEEEEEecCCeEEEE
Q 036879 741 SENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE--------GTLRSFDAECEILGSIRHRNLVKIISTCSSDHFKALV 812 (1029)
Q Consensus 741 ~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 812 (1029)
...+.||+|+||+||+|.. .++.+|+|....... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 578899998654321 1234589999999999999999666565566777999
Q ss_pred EeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCC
Q 036879 813 LEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDET 892 (1029)
Q Consensus 813 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 892 (1029)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+||+++. .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999854 5689999999999999 777999999999999999 99999999999875432
Q ss_pred Cce------eccccCCccccCccCC------CCCCcchhHHHHHHHHHhcCCCCCC
Q 036879 893 SMT------QTQTLATIGYMAPEWK------LSRKGDVYSYGIILMETFTKKKPTD 936 (1029)
Q Consensus 893 ~~~------~~~~~gt~~y~aPE~~------~~~~~DvwSlGvil~elltg~~p~~ 936 (1029)
... .....||+.|||||++ ++..+|+||..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 1245799999999984 5667899999999888888877764
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.5e-23 Score=218.95 Aligned_cols=196 Identities=19% Similarity=0.207 Sum_probs=112.9
Q ss_pred cCcEEEecCccccccccccccCCCCCCEEEecccc-ccCcccccccCCCCCcEEecCC-CcccCccccccccccccceee
Q 036879 429 NLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNK-LQGSITTDLCGLRSLSEFYSDG-NELNGSLPQCLDSLISLRTLS 506 (1029)
Q Consensus 429 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~ 506 (1029)
+|++|+|++|+|++..+..|..+++|++|++++|+ ++.+.+..|.++++|++|++++ |+++...+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44444444444444333344444445555555443 4444444444444444444444 444444455566666666666
Q ss_pred ccCccccCCCCCCccCCCCCc---EEEccCC-cccCcCCcccccccccc-EEEccCCcCCCCCCccccCccccccccccc
Q 036879 507 LGFNRLTSVIPSSLWSLRDIL---NVNLSSN-SLNGTLPVEIGNLKVVT-KIDLSRNDLSGEIPSSIGDLKNMQHLSLAD 581 (1029)
Q Consensus 507 Ls~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 581 (1029)
+++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ .|++++|+++...+..|.. ++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 66666665 333 56666666 6677776 66655555666677777 7777777776333333333 6777777777
Q ss_pred cc-ccccCCccccCC-CCCCEEeCcCCcccCcCchhhhcccccceeeccCC
Q 036879 582 NK-FQGSIPDSLGGL-TSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFN 630 (1029)
Q Consensus 582 N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 630 (1029)
|+ +++..+..|.++ ++|++|+|++|++++..+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 74 765555666777 7777777777777744333 4556666666654
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.2e-22 Score=215.54 Aligned_cols=206 Identities=17% Similarity=0.191 Sum_probs=178.5
Q ss_pred CCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcc-ccccccccccCCCCCCEEEecc-ccccCcc
Q 036879 391 LSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNE-LTGSIPKAIGRLQKLQGLYLQH-NKLQGSI 468 (1029)
Q Consensus 391 l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~ 468 (1029)
++ .+|. +.. .+++|++++|++++..+..|.++++|++|+|++|+ +++..+..|..+++|++|++++ |++++..
T Consensus 23 l~-~ip~-~~~---~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 23 IQ-RIPS-LPP---STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp CS-SCCC-CCT---TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred cc-ccCC-CCC---cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 54 5565 332 58999999999998888899999999999999997 8877777899999999999999 9999888
Q ss_pred cccccCCCCCcEEecCCCcccCccccccccccccc---eeeccCc-cccCCCCCCccCCCCCc-EEEccCCcccCcCCcc
Q 036879 469 TTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLR---TLSLGFN-RLTSVIPSSLWSLRDIL-NVNLSSNSLNGTLPVE 543 (1029)
Q Consensus 469 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~ 543 (1029)
+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| +++++.+..|.++++|+ .|++++|+++...+..
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~ 175 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYA 175 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTT
T ss_pred HHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhh
Confidence 8899999999999999999986 555 88889998 9999999 99988888999999999 9999999999544445
Q ss_pred ccccccccEEEccCCc-CCCCCCccccCc-ccccccccccccccccCCccccCCCCCCEEeCcCCc
Q 036879 544 IGNLKVVTKIDLSRND-LSGEIPSSIGDL-KNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNN 607 (1029)
Q Consensus 544 ~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 607 (1029)
+.. ++|+.|++++|+ +++..+..|..+ ++|+.|+|++|+|++ +|.. .+++|+.|+++++.
T Consensus 176 ~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 176 FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 555 899999999995 997777889999 999999999999995 5543 57899999999873
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.7e-24 Score=243.52 Aligned_cols=236 Identities=18% Similarity=0.191 Sum_probs=105.4
Q ss_pred cccceeeccCCcCCCCCC----ccccCchhhhcceeccccccccccccccCCc-----CcCcEEEecCcccccccccccc
Q 036879 379 KDLRKLILSENPLSGVLP----ISIGNLSNAMDVLYLSACNIKGSIPSEIGNL-----NNLTTLHLETNELTGSIPKAIG 449 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p----~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~ 449 (1029)
++|++|+|++|.+++..+ ..+..++..|++|+|++|+|++..+..|..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 346666666666654444 3333443225555555555554444444443 5555555555555543333222
Q ss_pred ----CC-CCCCEEEeccccccCccccccc----C-CCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCC
Q 036879 450 ----RL-QKLQGLYLQHNKLQGSITTDLC----G-LRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSS 519 (1029)
Q Consensus 450 ----~l-~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 519 (1029)
.+ ++|++|+|++|++++..+..+. . .++|++|++++|+++...+..+ +..
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l--------------------~~~ 161 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL--------------------IQI 161 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH--------------------HHH
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH--------------------HHH
Confidence 22 4555555555555444333322 1 1344444444444443222211 112
Q ss_pred ccCCC-CCcEEEccCCcccCcCCccccc----c-ccccEEEccCCcCCCC----CCccccC-cccccccccccccccccC
Q 036879 520 LWSLR-DILNVNLSSNSLNGTLPVEIGN----L-KVVTKIDLSRNDLSGE----IPSSIGD-LKNMQHLSLADNKFQGSI 588 (1029)
Q Consensus 520 ~~~l~-~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~ 588 (1029)
+..++ +|+.|+|++|++++..+..+.. + ++|+.|||++|.+++. ++..+.. .++|+.|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 22222 4555555555554433332222 2 3555555555555432 2222222 235555555555554432
Q ss_pred C----ccccCCCCCCEEeCcCCcccCcCch-------hhhcccccceeeccCCCCcC
Q 036879 589 P----DSLGGLTSLNFLDMSSNNLSGEIPN-------SLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 589 ~----~~~~~l~~L~~L~Ls~N~l~~~~~~-------~~~~l~~L~~L~l~~N~l~~ 634 (1029)
+ ..+..+++|++|+|++|.+++..+. .+..+++|+.||+++|++..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 2 2233445555555555554332222 33344555555555555543
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=224.14 Aligned_cols=202 Identities=20% Similarity=0.185 Sum_probs=143.3
Q ss_pred cCcCcEEEecCccccccccccc--cCCCCCCEEEeccccccCccc----ccccCCCCCcEEecCCCcccCcccccccccc
Q 036879 427 LNNLTTLHLETNELTGSIPKAI--GRLQKLQGLYLQHNKLQGSIT----TDLCGLRSLSEFYSDGNELNGSLPQCLDSLI 500 (1029)
Q Consensus 427 l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 500 (1029)
+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|++.+..+..|+.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3456666666666666666655 666666666666666665332 3344566777777777777667777777777
Q ss_pred ccceeeccCccccC---CC-CCCccCCCCCcEEEccCCcccCcCCc----cccccccccEEEccCCcCCCCCCccccCc-
Q 036879 501 SLRTLSLGFNRLTS---VI-PSSLWSLRDILNVNLSSNSLNGTLPV----EIGNLKVVTKIDLSRNDLSGEIPSSIGDL- 571 (1029)
Q Consensus 501 ~L~~L~Ls~N~l~~---~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l- 571 (1029)
+|++|+|++|++.+ .. +..+..+++|++|+|++|+++. ++. .++.+++|++|||++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 77777777777654 22 2334677788888888888863 232 24677888888888888887777777666
Q ss_pred --ccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 572 --KNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 572 --~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
++|+.|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|++++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 68888888888888 5677664 7888999999998854 33 6778888999999998874
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5e-22 Score=212.46 Aligned_cols=179 Identities=23% Similarity=0.274 Sum_probs=106.7
Q ss_pred CcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccC
Q 036879 430 LTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGF 509 (1029)
Q Consensus 430 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 509 (1029)
.++++++++.++ .+|..+. ++++.|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 445555555555 3443332 3555555555555555444455555555555555555555555566666666666666
Q ss_pred ccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCC
Q 036879 510 NRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIP 589 (1029)
Q Consensus 510 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 589 (1029)
|+++++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 66666555666666666666666666665555555666666666666666665555556666666666666666665555
Q ss_pred ccccCCCCCCEEeCcCCcccCc
Q 036879 590 DSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 590 ~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
..|..+++|++|+|++|++++.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHhCCCCCCEEEeeCCceeCC
Confidence 5666666666666666666644
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=6.7e-23 Score=226.72 Aligned_cols=200 Identities=17% Similarity=0.202 Sum_probs=156.2
Q ss_pred hcceecccccccccccccc--CCcCcCcEEEecCcccccccc----ccccCCCCCCEEEeccccccCcccccccCCCCCc
Q 036879 406 MDVLYLSACNIKGSIPSEI--GNLNNLTTLHLETNELTGSIP----KAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLS 479 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 479 (1029)
|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..|..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 7888888888888888887 888888888888888886444 3445788888888888888888888888888888
Q ss_pred EEecCCCcccCc--c--ccccccccccceeeccCccccCCCCC---CccCCCCCcEEEccCCcccCcCCcccccc---cc
Q 036879 480 EFYSDGNELNGS--L--PQCLDSLISLRTLSLGFNRLTSVIPS---SLWSLRDILNVNLSSNSLNGTLPVEIGNL---KV 549 (1029)
Q Consensus 480 ~L~l~~N~l~~~--~--~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~ 549 (1029)
+|++++|++.+. . +..+..+++|++|+|++|+++...+. .+..+++|++|+|++|++++..|..+..+ ++
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 252 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSA 252 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTT
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCc
Confidence 888888887642 1 23346788888888888888743221 35677888888888888887777777766 58
Q ss_pred ccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccC
Q 036879 550 VTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 550 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|+|+.
T Consensus 253 L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 253 LNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 888888888888 5666664 7888888888888853 43 6777888888888888873
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2.5e-22 Score=221.50 Aligned_cols=193 Identities=26% Similarity=0.388 Sum_probs=110.5
Q ss_pred CcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccccccccccccee
Q 036879 426 NLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTL 505 (1029)
Q Consensus 426 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 505 (1029)
.+++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|++++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 34455555555555542 22 34455555555555555544333 45555555555555555432 245566666666
Q ss_pred eccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccccc
Q 036879 506 SLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQ 585 (1029)
Q Consensus 506 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 585 (1029)
+|++|+++++.+ +..+++|+.|++++|++++..+ ++.+++|+.|++++|++++..+ +..+++|+.|+|++|+++
T Consensus 113 ~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 666666655322 5666666666666666664332 5666666666666666664322 666666666666666666
Q ss_pred ccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcC
Q 036879 586 GSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 586 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
+..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 4332 5666666666776666664442 5666666667776666664
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.8e-24 Score=245.88 Aligned_cols=213 Identities=20% Similarity=0.271 Sum_probs=138.1
Q ss_pred cCCcCcCcEEEecCcc---ccccccccc-------cCCCCCCEEEeccccccC----cccccccCCCCCcEEecCCCccc
Q 036879 424 IGNLNNLTTLHLETNE---LTGSIPKAI-------GRLQKLQGLYLQHNKLQG----SITTDLCGLRSLSEFYSDGNELN 489 (1029)
Q Consensus 424 ~~~l~~L~~L~L~~N~---l~~~~~~~~-------~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~ 489 (1029)
|..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|.++. ..+..+..+++|+.|++++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 4455666666666642 333333333 456666666666666655 24445556666666666666665
Q ss_pred Cccccccc----cc---------cccceeeccCcccc-CCCC---CCccCCCCCcEEEccCCcccC-----cCCcccccc
Q 036879 490 GSLPQCLD----SL---------ISLRTLSLGFNRLT-SVIP---SSLWSLRDILNVNLSSNSLNG-----TLPVEIGNL 547 (1029)
Q Consensus 490 ~~~~~~~~----~l---------~~L~~L~Ls~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l 547 (1029)
...+..+. .+ ++|++|+|++|+++ ...+ ..+..+++|+.|+|++|+++. ..|..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 43333333 33 67777777777776 2233 355567777777777777762 334467777
Q ss_pred ccccEEEccCCcCC----CCCCccccCccccccccccccccccc----CCcccc--CCCCCCEEeCcCCcccC----cCc
Q 036879 548 KVVTKIDLSRNDLS----GEIPSSIGDLKNMQHLSLADNKFQGS----IPDSLG--GLTSLNFLDMSSNNLSG----EIP 613 (1029)
Q Consensus 548 ~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~--~l~~L~~L~Ls~N~l~~----~~~ 613 (1029)
++|+.|+|++|.++ ..+|..+..+++|+.|+|++|+|++. ++..+. .+++|++|+|++|++++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 78888888888875 45667777788888888888888765 455553 37888888888888886 366
Q ss_pred hhh-hcccccceeeccCCCCcCCC
Q 036879 614 NSL-KALSLLKFLNLSFNGLQGQV 636 (1029)
Q Consensus 614 ~~~-~~l~~L~~L~l~~N~l~~~~ 636 (1029)
..+ .++++|+.|++++|++++..
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHhcCCCceEEEccCCcCCcch
Confidence 666 56788888888888887543
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=9.7e-22 Score=210.23 Aligned_cols=183 Identities=19% Similarity=0.203 Sum_probs=166.3
Q ss_pred CCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEc
Q 036879 452 QKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNL 531 (1029)
Q Consensus 452 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 531 (1029)
...++++++++.++..+. .+. ++++.|++++|.+.+..+..|.++++|++|+|++|+++++.+..|..+++|+.|+|
T Consensus 14 ~~~~~l~~~~~~l~~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDSVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSSCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCccccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 457889999999985544 333 68999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCc
Q 036879 532 SSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 532 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888899999999999999999977777889999999999999999977777899999999999999999988
Q ss_pred CchhhhcccccceeeccCCCCcCCCC
Q 036879 612 IPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 612 ~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
.+..+..+++|+.|++++|++++...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 88899999999999999999998643
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=3.8e-24 Score=244.80 Aligned_cols=269 Identities=17% Similarity=0.224 Sum_probs=197.5
Q ss_pred CCCcccccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCC---CCCCccccCchhhhc
Q 036879 331 PIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLS---GVLPISIGNLSNAMD 407 (1029)
Q Consensus 331 ~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~~L~ 407 (1029)
.++..+..+++|+.|++++|.+....+..+ ...+..+++|+.|+|++|.+. +.+|..+..
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l-----------~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~------ 85 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWL-----------SENIASKKDLEIAEFSDIFTGRVKDEIPEALRL------ 85 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHH-----------HHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHH-----------HHHHHhCCCccEEeCcccccCccccchhHHHHH------
Confidence 566777777777777777777764433222 123456677777777775432 222322211
Q ss_pred ceeccccccccccccccCCcCcCcEEEecCccccc----cccccccCCCCCCEEEeccccccCcccccccC----C----
Q 036879 408 VLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTG----SIPKAIGRLQKLQGLYLQHNKLQGSITTDLCG----L---- 475 (1029)
Q Consensus 408 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---- 475 (1029)
+...|..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.++...+..+.. +
T Consensus 86 ------------l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~ 153 (386)
T 2ca6_A 86 ------------LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNK 153 (386)
T ss_dssp ------------HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhh
Confidence 11334677888888888888886 36777888888888888888886554444433 3
Q ss_pred -----CCCcEEecCCCccc-Cccc---cccccccccceeeccCccccC-----CCCCCccCCCCCcEEEccCCccc----
Q 036879 476 -----RSLSEFYSDGNELN-GSLP---QCLDSLISLRTLSLGFNRLTS-----VIPSSLWSLRDILNVNLSSNSLN---- 537 (1029)
Q Consensus 476 -----~~L~~L~l~~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~---- 537 (1029)
++|+.|++++|+++ ...+ ..+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++
T Consensus 154 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~ 233 (386)
T 2ca6_A 154 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 233 (386)
T ss_dssp HHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred hcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH
Confidence 78899999999887 3444 467788999999999999973 45558889999999999999996
Q ss_pred CcCCccccccccccEEEccCCcCCCC----CCccc--cCcccccccccccccccc----cCCccc-cCCCCCCEEeCcCC
Q 036879 538 GTLPVEIGNLKVVTKIDLSRNDLSGE----IPSSI--GDLKNMQHLSLADNKFQG----SIPDSL-GGLTSLNFLDMSSN 606 (1029)
Q Consensus 538 ~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N 606 (1029)
..+|..+..+++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|+|++ .+|..+ .++++|++|+|++|
T Consensus 234 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 234 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred HHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 56788899999999999999999865 45666 348999999999999997 477777 66899999999999
Q ss_pred cccCcCc--hhh-hcccccceeecc
Q 036879 607 NLSGEIP--NSL-KALSLLKFLNLS 628 (1029)
Q Consensus 607 ~l~~~~~--~~~-~~l~~L~~L~l~ 628 (1029)
++++..+ ..+ ..++.++.+++.
T Consensus 314 ~l~~~~~~~~~l~~~l~~~~~~~l~ 338 (386)
T 2ca6_A 314 RFSEEDDVVDEIREVFSTRGRGELD 338 (386)
T ss_dssp BSCTTSHHHHHHHHHHHHHTCCEEC
T ss_pred cCCcchhHHHHHHHHhhhcCcchhh
Confidence 9998774 333 345666655553
No 343
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=7.1e-24 Score=240.04 Aligned_cols=267 Identities=18% Similarity=0.186 Sum_probs=183.7
Q ss_pred eEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCccccccccccccc-ccceeeccCCcCCCCCCcc
Q 036879 320 QLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCK-DLRKLILSENPLSGVLPIS 398 (1029)
Q Consensus 320 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~ 398 (1029)
.+.|+.|.+++.+|..+...++|+.|++++|.+.+..+..+ ...+..++ +|++|+|++|++++..+..
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l-----------~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 70 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVEL-----------IQAFANTPASVTSLNLSGNSLGFKNSDE 70 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHH-----------HHHHHTCCTTCCEEECCSSCGGGSCHHH
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHH-----------HHHHHhCCCceeEEECcCCCCCHHHHHH
Confidence 46899999999999988888889999999999986544211 13456777 8999999999999887877
Q ss_pred ccCc----hhhhcceeccccccccccccccCCc-----CcCcEEEecCcccccccccccc----C-CCCCCEEEeccccc
Q 036879 399 IGNL----SNAMDVLYLSACNIKGSIPSEIGNL-----NNLTTLHLETNELTGSIPKAIG----R-LQKLQGLYLQHNKL 464 (1029)
Q Consensus 399 ~~~l----~~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l 464 (1029)
+..+ ...|++|+|++|++++..+..+... ++|++|+|++|+|++..+..+. . .++|++|+|++|.+
T Consensus 71 l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 71 LVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred HHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 7775 1349999999999998777755544 8999999999999976665544 3 36999999999999
Q ss_pred cCcccccc----cCCC-CCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCC-CCCcEEEccCCcccC
Q 036879 465 QGSITTDL----CGLR-SLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSL-RDILNVNLSSNSLNG 538 (1029)
Q Consensus 465 ~~~~~~~~----~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~ 538 (1029)
+......+ ...+ +|++|++++|++++..+..+... +... ++|+.|+|++|.|++
T Consensus 151 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 151 GIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECTTSCGGG
T ss_pred CHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCCCCCEEECCCCCCCh
Confidence 86544333 3333 56666666666655444433322 1112 244444444444443
Q ss_pred c----CCccccc-cccccEEEccCCcCCCCCC----ccccCccccccccccccccccc-------CCccccCCCCCCEEe
Q 036879 539 T----LPVEIGN-LKVVTKIDLSRNDLSGEIP----SSIGDLKNMQHLSLADNKFQGS-------IPDSLGGLTSLNFLD 602 (1029)
Q Consensus 539 ~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~-------~~~~~~~l~~L~~L~ 602 (1029)
. ++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|++||
T Consensus 211 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~Ld 290 (362)
T 3goz_A 211 KSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVD 290 (362)
T ss_dssp SCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEEC
T ss_pred hHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEe
Confidence 1 2333333 3466777777777665433 2345567778888888874432 334677888899999
Q ss_pred CcCCcccCcCchhhh
Q 036879 603 MSSNNLSGEIPNSLK 617 (1029)
Q Consensus 603 Ls~N~l~~~~~~~~~ 617 (1029)
+++|++....+..+.
T Consensus 291 L~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 291 KNGKEIHPSHSIPIS 305 (362)
T ss_dssp TTSCBCCGGGCHHHH
T ss_pred cCCCcCCCcchHHHH
Confidence 999998876554443
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.8e-23 Score=231.81 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=201.9
Q ss_pred ccceeeccCCcCCCCCCccccCc-hhhhcceeccccccccccccccCCcCcCcEEEecCcccccc-ccccccCCCCCCEE
Q 036879 380 DLRKLILSENPLSGVLPISIGNL-SNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGS-IPKAIGRLQKLQGL 457 (1029)
Q Consensus 380 ~L~~L~Ls~N~l~~~~p~~~~~l-~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 457 (1029)
.++.+++++|.+. +..+..+ ...++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3677888888765 4444444 12388889999988876665 55789999999999998865 77888899999999
Q ss_pred EeccccccCcccccccCCCCCcEEecCCC-cccC-ccccccccccccceeeccCc-cccCC-CCCCccCCC-CCcEEEcc
Q 036879 458 YLQHNKLQGSITTDLCGLRSLSEFYSDGN-ELNG-SLPQCLDSLISLRTLSLGFN-RLTSV-IPSSLWSLR-DILNVNLS 532 (1029)
Q Consensus 458 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~-~~~~~~~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~-~L~~L~Ls 532 (1029)
+|++|.+++..+..+..+++|++|++++| .+++ ..+..+..+++|++|++++| .+++. ++..+..++ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999988888888888999999999999 6775 36777889999999999999 88864 566788899 99999999
Q ss_pred CC--ccc-CcCCccccccccccEEEccCCc-CCCCCCccccCccccccccccccc-ccccCCccccCCCCCCEEeCcCCc
Q 036879 533 SN--SLN-GTLPVEIGNLKVVTKIDLSRND-LSGEIPSSIGDLKNMQHLSLADNK-FQGSIPDSLGGLTSLNFLDMSSNN 607 (1029)
Q Consensus 533 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 607 (1029)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 455 4567778889999999999999 777778889999999999999995 33222236888999999999999
Q ss_pred ccCcCchhhhccc-ccceeeccCCCCcCCCCC
Q 036879 608 LSGEIPNSLKALS-LLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 608 l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~ 638 (1029)
++. ..+..+. .+..|++++|++++..|.
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 442 3445553 488888999999998775
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4.6e-22 Score=223.92 Aligned_cols=245 Identities=16% Similarity=0.173 Sum_probs=123.1
Q ss_pred ceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCcccccccc-ccccCCCCCCE-EEe
Q 036879 382 RKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIP-KAIGRLQKLQG-LYL 459 (1029)
Q Consensus 382 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~L 459 (1029)
++++.++++++ .+|..+. ..+++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| .+|.+++++++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45666666665 4444332 224555555555554334445555555555555555433222 33444444433 333
Q ss_pred ccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccC-CcccC
Q 036879 460 QHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSS-NSLNG 538 (1029)
Q Consensus 460 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~ 538 (1029)
+.|++ +...|..|..+++|++|++++|+++.+.+..+....++..|++++ |+++.
T Consensus 88 ~~N~l------------------------~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 88 KANNL------------------------LYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp EETTC------------------------CEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCE
T ss_pred cCCcc------------------------cccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccc
Confidence 34444 445555555556666666666666555555555555555555543 44554
Q ss_pred cCCccccccc-cccEEEccCCcCCCCCCccccCccccccccccc-ccccccCCccccCCCCCCEEeCcCCcccCcCchhh
Q 036879 539 TLPVEIGNLK-VVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLAD-NKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSL 616 (1029)
Q Consensus 539 ~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 616 (1029)
..+..|..+. .++.|+|++|+|+. +|.......+|+.|++++ |.++...++.|.++++|++|||++|+|+...+..+
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~ 222 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 222 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC
T ss_pred ccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh
Confidence 4444444443 45666666666653 333333345566666653 45553333455666666666666666664444444
Q ss_pred hcccccceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCC
Q 036879 617 KALSLLKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGA 659 (1029)
Q Consensus 617 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~ 659 (1029)
.++++|+.+++ .--..+|....++++..+.+ .+++.|.+
T Consensus 223 ~~L~~L~~l~~---~~l~~lP~l~~l~~L~~l~l-~~~~~c~~ 261 (350)
T 4ay9_X 223 ENLKKLRARST---YNLKKLPTLEKLVALMEASL-TYPSHCCA 261 (350)
T ss_dssp TTCCEEECTTC---TTCCCCCCTTTCCSCCEEEC-SCHHHHHH
T ss_pred ccchHhhhccC---CCcCcCCCchhCcChhhCcC-CCCccccc
Confidence 44333333322 22224444444555555444 35555544
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=5.6e-22 Score=218.78 Aligned_cols=215 Identities=21% Similarity=0.381 Sum_probs=166.1
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLY 458 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 458 (1029)
..+..+.+..+.+.+.+. ...+.+ ++.|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 19 ~~~~~~~l~~~~~~~~~~--~~~l~~-L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTVT--QADLDG-ITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHTTCSSTTSEEC--HHHHHT-CCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHhCCCCcCceec--HHHcCC-cCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 334444555555553322 233443 7777777777774 34 57778888888888888885433 88888888888
Q ss_pred eccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 459 LQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 459 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
|++|++++. ..+..+++|+.|++++|++++.. .+..+++|++|++++|+++++.+ +..+++|+.|++++|++++
T Consensus 92 L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 92 LSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCSCCCSCC--GGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ccCCcCCCc--hhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 888888764 36788888888888888887643 38889999999999999987654 8889999999999999986
Q ss_pred cCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcC
Q 036879 539 TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEI 612 (1029)
Q Consensus 539 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 612 (1029)
..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 443 8899999999999999985543 8889999999999999996553 888999999999999998543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.4e-22 Score=227.11 Aligned_cols=253 Identities=15% Similarity=0.228 Sum_probs=124.4
Q ss_pred CcEEEccCcccCCCCCchhhhcc--cccceEeecCcccCCCCCcccccccccceecCCCccccCCCCCCCCCCCCCcccc
Q 036879 293 LTVLSLTANNLLGNLPSNIGHSL--PNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELG 370 (1029)
Q Consensus 293 L~~L~Ls~N~l~~~lp~~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~ 370 (1029)
++.+++++|.+. |..+. .+ ++++.|++++|.+.+..+. +..+++|+.|++++|.+.+.
T Consensus 49 ~~~l~l~~~~~~---~~~~~-~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~--------------- 108 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTG-RLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS--------------- 108 (336)
T ss_dssp SSEEECTTCBCC---HHHHH-HHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH---------------
T ss_pred heeeccccccCC---HHHHH-hhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH---------------
Confidence 678888888764 33333 35 6778888888877765544 33445555555555544321
Q ss_pred cccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCc-ccccc-ccccc
Q 036879 371 FLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETN-ELTGS-IPKAI 448 (1029)
Q Consensus 371 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~ 448 (1029)
.+|..+..+++ |++|++++|++++..+..|+.+++|++|+|++| .+++. ++..+
T Consensus 109 -----------------------~~~~~~~~~~~-L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~ 164 (336)
T 2ast_B 109 -----------------------TLHGILSQCSK-LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL 164 (336)
T ss_dssp -----------------------HHHHHHTTBCC-CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH
T ss_pred -----------------------HHHHHHhhCCC-CCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH
Confidence 02222222222 334444444443344444445555555555555 44431 34445
Q ss_pred cCCCCCCEEEeccc-cccCc-ccccccCCC-CCcEEecCCC--ccc-CccccccccccccceeeccCcc-ccCCCCCCcc
Q 036879 449 GRLQKLQGLYLQHN-KLQGS-ITTDLCGLR-SLSEFYSDGN--ELN-GSLPQCLDSLISLRTLSLGFNR-LTSVIPSSLW 521 (1029)
Q Consensus 449 ~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~ 521 (1029)
..+++|++|++++| .+++. .+..+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+.
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 55555555555555 55432 233344444 4555555544 222 2344445555556666666555 4444444555
Q ss_pred CCCCCcEEEccCCc-ccCcCCccccccccccEEEccCCcCCCCCCccccCc-ccccccccccccccccCCcccc
Q 036879 522 SLRDILNVNLSSNS-LNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDL-KNMQHLSLADNKFQGSIPDSLG 593 (1029)
Q Consensus 522 ~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~ 593 (1029)
.+++|+.|++++|. ++......++.+++|+.|++++| ++ ...+..+ ..|+.|++++|++++..|..++
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 55555555555553 22111123455555555555555 22 1223333 2245555555555555554443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.4e-21 Score=218.03 Aligned_cols=247 Identities=16% Similarity=0.137 Sum_probs=181.9
Q ss_pred cccccccceecCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccc
Q 036879 336 ISNASMLTLIDMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACN 415 (1029)
Q Consensus 336 l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~ 415 (1029)
++.+.. +.++-+++.++ .+|..+ .+++++|+|++|+|+...+.+|.++.+ |++|+|++|+
T Consensus 6 ~C~C~~-~~v~C~~~~Lt-~iP~~l-----------------~~~l~~L~Ls~N~i~~i~~~~f~~l~~-L~~L~Ls~N~ 65 (350)
T 4ay9_X 6 ICHCSN-RVFLCQESKVT-EIPSDL-----------------PRNAIELRFVLTKLRVIQKGAFSGFGD-LEKIEISQND 65 (350)
T ss_dssp SSEEET-TEEEEESTTCC-SCCTTC-----------------CTTCSEEEEESCCCSEECTTSSTTCTT-CCEEEEECCT
T ss_pred ccEeeC-CEEEecCCCCC-ccCcCc-----------------CCCCCEEEccCCcCCCcCHHHHcCCCC-CCEEECcCCC
Confidence 344433 67788888887 445322 257999999999999766678899987 9999999999
Q ss_pred cccccc-cccCCcCcCcE-EEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC-CcccCcc
Q 036879 416 IKGSIP-SEIGNLNNLTT-LHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG-NELNGSL 492 (1029)
Q Consensus 416 l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~ 492 (1029)
+.+.+| .+|.++++|.+ +.++.|+|++..|..|..+++|++|++++|+++...+..+....++..+++.+ |++....
T Consensus 66 i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 66 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp TCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred CCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 976555 57899998875 67778999988889999999999999999999988887777777888888754 6677666
Q ss_pred cccccccc-ccceeeccCccccCCCCCCccCCCCCcEEEccC-CcccCcCCccccccccccEEEccCCcCCCCCCccccC
Q 036879 493 PQCLDSLI-SLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSS-NSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGD 570 (1029)
Q Consensus 493 ~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 570 (1029)
+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |.++.+.+..|.++++|+.|||++|+|+...+..|.+
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred ccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 66777664 57778888888876555554 345677777764 6666554556777788888888888887554555655
Q ss_pred cccccccccccccccccCCccccCCCCCCEEeCcCCc
Q 036879 571 LKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNN 607 (1029)
Q Consensus 571 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 607 (1029)
+++|+.+++ +.++ .+| .+..+++|+.++++++.
T Consensus 225 L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 225 LKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred chHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 555555544 3344 455 36677777777776654
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.3e-21 Score=231.31 Aligned_cols=212 Identities=25% Similarity=0.358 Sum_probs=129.9
Q ss_pred ccCCCCCCCCCC-----ceeeE-EEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCC
Q 036879 25 LASNWSTNTSVC-----NWFGV-TCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRL 98 (1029)
Q Consensus 25 ~~~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (1029)
+.+ |..+.++| .|.|+ +|.. ++++.|+|+++++.+ ||+.+. ++|+.|+|++|+|+ .+| ..+++|
T Consensus 33 l~~-W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDK-WEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHH-HHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHH-HhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 445 87677788 79999 7863 478888888888875 887764 77888888888887 666 446777
Q ss_pred ceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCC
Q 036879 99 KYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSN 178 (1029)
Q Consensus 99 ~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 178 (1029)
++|+|++|+|+. +|. +.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++
T Consensus 103 ~~L~Ls~N~l~~--ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 103 EYLDACDNRLST--LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CEEECCSSCCSC--CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEEccCCCCCC--cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 777777777774 455 443 77777777777774 555 46677777777777763 554 345555555555
Q ss_pred CcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeec
Q 036879 179 NQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLV 258 (1029)
Q Consensus 179 N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 258 (1029)
|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. +|
T Consensus 170 N~L~~----------------------------------lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L------ 202 (571)
T 3cvr_A 170 NQLTF----------------------------------LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN------ 202 (571)
T ss_dssp SCCSC----------------------------------CCC-CC--TTCCEEECCSSCCS-SCCC-CC-----------
T ss_pred CCCCC----------------------------------cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh------
Confidence 55443 333 33 56677777777666 4444 332 11
Q ss_pred ccccccccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchh
Q 036879 259 YTNLTGEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNI 311 (1029)
Q Consensus 259 ~n~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~ 311 (1029)
....+.|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+
T Consensus 203 ----~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 203 ----HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp ---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred ----hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 111122345555555555 345555555555555555555554444443
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=6.1e-21 Score=197.75 Aligned_cols=186 Identities=20% Similarity=0.282 Sum_probs=125.3
Q ss_pred CCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCC
Q 036879 34 SVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEI 113 (1029)
Q Consensus 34 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 113 (1029)
..|.|.+|.|+.. ++. .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+++.+.
T Consensus 5 C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~- 68 (208)
T 2o6s_A 5 CSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP- 68 (208)
T ss_dssp CEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC-
T ss_pred CEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC-
Confidence 4589999999743 222 455443 346777777777777555556677777777777777777431
Q ss_pred CCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCCCCCCC
Q 036879 114 PPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSP 193 (1029)
Q Consensus 114 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~ 193 (1029)
+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+.++++|++|++++|++++.++..+..
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-- 146 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR-- 146 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT--
T ss_pred hhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc--
Confidence 334577777777777777777555555677777777777777777555556777777777777777777666654321
Q ss_pred cccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCcccccccc
Q 036879 194 LQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITM 251 (1029)
Q Consensus 194 l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 251 (1029)
..+|++|++++|.+.+ .+++|++|+++.|+++|.+|..++++..
T Consensus 147 -------l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 147 -------LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -------CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -------CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 1245666666666543 3456777777777777777777776654
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=2.5e-21 Score=209.84 Aligned_cols=141 Identities=17% Similarity=0.154 Sum_probs=114.0
Q ss_pred HHHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc------------------hhhHHHHHHHHHHhcCC
Q 036879 731 QELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE------------------GTLRSFDAECEILGSIR 792 (1029)
Q Consensus 731 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 792 (1029)
..+......|++.+.||+|+||.||+|+..+|+.||+|.++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455667778899999999999999997799999999864321 13456889999999999
Q ss_pred CCceEEEEEEEecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEEC
Q 036879 793 HRNLVKIISTCSSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLN 872 (1029)
Q Consensus 793 h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~ 872 (1029)
| +++++++.. +..++||||+++++|.+ +.. .....++.|++.|++||| +.||+||||||+||+++
T Consensus 163 ~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 G---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp T---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred C---CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 4 555555543 45589999999999987 421 234579999999999999 77899999999999999
Q ss_pred CCCcEEEEccCCcee
Q 036879 873 ESMVACLSDFGISKL 887 (1029)
Q Consensus 873 ~~~~~kl~Dfg~a~~ 887 (1029)
++.+||+|||+|+.
T Consensus 228 -~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE 241 (282)
T ss_dssp -TTEEEECCCTTCEE
T ss_pred -CCcEEEEECCCCeE
Confidence 99999999999963
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.9e-20 Score=191.67 Aligned_cols=162 Identities=27% Similarity=0.268 Sum_probs=98.0
Q ss_pred cCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeecc
Q 036879 429 NLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLG 508 (1029)
Q Consensus 429 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 508 (1029)
+|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444445555555555555555554444444555555555555555555555556666666666666
Q ss_pred CccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccC
Q 036879 509 FNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSI 588 (1029)
Q Consensus 509 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 588 (1029)
+|+++++.+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 666666666566666666666666666665555556666677777777776543 3446667777777777777
Q ss_pred CccccCCCC
Q 036879 589 PDSLGGLTS 597 (1029)
Q Consensus 589 ~~~~~~l~~ 597 (1029)
|.+++.++.
T Consensus 182 p~~~~~l~~ 190 (208)
T 2o6s_A 182 RNSAGSVAP 190 (208)
T ss_dssp BCTTSSBCT
T ss_pred eccCccccC
Confidence 766665543
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=6.5e-20 Score=216.82 Aligned_cols=168 Identities=25% Similarity=0.323 Sum_probs=106.3
Q ss_pred cCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeecc
Q 036879 429 NLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLG 508 (1029)
Q Consensus 429 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 508 (1029)
+|++|+|++|+|+ .+| ..+++|++|+|++|+|+++ +. +.. +|+.|++++|++++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-p~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-PE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-CC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-ch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 3444444444444 233 2234444444444444432 22 222 44444555554444 333 45677777777
Q ss_pred CccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccc-------ccccccc
Q 036879 509 FNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNM-------QHLSLAD 581 (1029)
Q Consensus 509 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~L~~ 581 (1029)
+|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 777776 333 46777888888888775 555 55 78888888888887 5555 554 66 8899999
Q ss_pred ccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccc
Q 036879 582 NKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSL 621 (1029)
Q Consensus 582 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 621 (1029)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 9998 57887878899999999999998888888877654
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=3.2e-21 Score=236.85 Aligned_cols=204 Identities=19% Similarity=0.155 Sum_probs=110.3
Q ss_pred chhHHHHHHHHHHhccCCCCCcccCCC-CCCCCCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCC-----e
Q 036879 3 VGRDQSALLALKAHVTNDPLNVLASNW-STNTSVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLS-----L 76 (1029)
Q Consensus 3 ~~~~~~al~~~~~~~~~~~~~~~~~~w-~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~-----~ 76 (1029)
+..|++||+++..++....+..-+. | ...+.++.|.+++++. .+++.|+|..+++.+ +|..+.....|. .
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~ 205 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQ-PTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDE 205 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCC-CcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccC
Confidence 4678899999998875443333334 6 4455678899999974 579999999998875 455443332222 2
Q ss_pred EeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCc
Q 036879 77 LNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQ 156 (1029)
Q Consensus 77 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 156 (1029)
++++.|.+. ..|..+..+++|++|+|++|++. .+|..+..+++|++|+|++|+|+ .+|..|+++++|++|+|++|+
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~--~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF--NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS--CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCC--CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 334445554 56778888999999999999988 56777888899999999999988 788889999999999999999
Q ss_pred CcccCCccccCCCcCcccccCCCcCcccCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccc
Q 036879 157 LQGHVPSSILNIPSLLAIDLSNNQFSGPMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVN 236 (1029)
Q Consensus 157 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 236 (1029)
|+ .+|..|.++++|++|+|++|.|+. +|..|+.|++|++|+|++|
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~~----------------------------------lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVTT----------------------------------LPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCCC----------------------------------CCSSTTSCTTCCCEECTTS
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCCc----------------------------------cChhhhcCCCccEEeCCCC
Confidence 98 788888888888888888887753 3455666777777777777
Q ss_pred cccCCCCcccccc
Q 036879 237 NFIGSIPREIGNI 249 (1029)
Q Consensus 237 ~l~~~~p~~~~~l 249 (1029)
++++.+|..+..+
T Consensus 327 ~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 327 PLEKQFLKILTEK 339 (727)
T ss_dssp CCCSHHHHHHHHH
T ss_pred ccCCCChHHHhhc
Confidence 7777666666543
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=4.1e-20 Score=192.99 Aligned_cols=137 Identities=23% Similarity=0.256 Sum_probs=94.3
Q ss_pred ccceeeccCccccCCCC-CCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccc
Q 036879 501 SLRTLSLGFNRLTSVIP-SSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSL 579 (1029)
Q Consensus 501 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 579 (1029)
.+++|+|++|+|+++.+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 34566666666665533 34666666667777777666666666677777777777777777666666777777777777
Q ss_pred ccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 580 ADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 580 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|+|+|.++
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7777776666777777777777777777776667777777777777777777776544
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2e-19 Score=189.08 Aligned_cols=163 Identities=20% Similarity=0.226 Sum_probs=133.3
Q ss_pred CCCCCCCCceeeEEEcCCCCceEEEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccc
Q 036879 29 WSTNTSVCNWFGVTCSPRHRRVTALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNF 108 (1029)
Q Consensus 29 w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 108 (1029)
|..+.+.|+|.+|.|+.. ++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 12 ~~~~~~~Cs~~~v~c~~~------------~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK------------RH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp CCCTTCEEETTEEECTTS------------CC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccCC------------Cc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 556788999999999743 22 37777654 8899999999999988899999999999999999999
Q ss_pred cCCCCCCcCCCCCccceeccccccccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcccCCCC
Q 036879 109 SSIEIPPWLDSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSGPMPSI 188 (1029)
Q Consensus 109 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 188 (1029)
+.++ +..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++.+
T Consensus 77 ~~i~-~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~--- 151 (229)
T 3e6j_A 77 GALP-VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP--- 151 (229)
T ss_dssp CCCC-TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC---
T ss_pred CCcC-hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC---
Confidence 8532 355789999999999999999766667889999999999999998 78888888888888888888776433
Q ss_pred CCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCC
Q 036879 189 YNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGS 241 (1029)
Q Consensus 189 ~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (1029)
+..|..+++|+.|+|++|.+...
T Consensus 152 ------------------------------~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 152 ------------------------------HGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp ------------------------------TTTTTTCTTCCEEECTTSCBCTT
T ss_pred ------------------------------HHHHhCCCCCCEEEeeCCCccCC
Confidence 33455677788888888887643
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=6.1e-20 Score=191.65 Aligned_cols=136 Identities=20% Similarity=0.282 Sum_probs=87.9
Q ss_pred cccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccc
Q 036879 500 ISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSL 579 (1029)
Q Consensus 500 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 579 (1029)
++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666555556666666666666666666555666666666666666666666544455666666666666
Q ss_pred ccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCC
Q 036879 580 ADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQ 635 (1029)
Q Consensus 580 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 635 (1029)
++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 66666666666666666677777777766666666666666666666666666653
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.5e-19 Score=197.43 Aligned_cols=187 Identities=22% Similarity=0.402 Sum_probs=110.6
Q ss_pred ceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCc
Q 036879 408 VLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNE 487 (1029)
Q Consensus 408 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 487 (1029)
.+.+..+.+++..+ +..+++|+.|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|+.|++++|.
T Consensus 28 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 33444444443222 3456667777777777663 33 36666777777777777765443 5556666666666666
Q ss_pred ccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCcc
Q 036879 488 LNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSS 567 (1029)
Q Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 567 (1029)
+++. ..+..+++|++|+|++|+++++ ..+..+++|+.|++++|++++. ..++.+++|+.|++++|++++..|
T Consensus 102 l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 102 VKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 5532 2366666666666666666653 3455666666666666666643 455666666666666666664433
Q ss_pred ccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccC
Q 036879 568 IGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 568 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
+..+++|+.|+|++|+|++ ++ .+..+++|+.|++++|+++.
T Consensus 174 l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 5666666666666666663 33 25666666666666666654
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.7e-19 Score=202.15 Aligned_cols=177 Identities=23% Similarity=0.203 Sum_probs=100.7
Q ss_pred cEEEecCccccccccccccCCCCCCEEEeccccccCccccccc-CCCCCcEEecCCCcccCccccccccccccceeeccC
Q 036879 431 TTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLC-GLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGF 509 (1029)
Q Consensus 431 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 509 (1029)
+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888888 4565543 3578888888888766665555 566666666666666555555555555555555555
Q ss_pred ccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCC
Q 036879 510 NRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIP 589 (1029)
Q Consensus 510 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 589 (1029)
|+|+++.+..|.++++|+.|+|++|+|++..|. .|..+++|+.|+|++|+|++..+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~------------------------~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN------------------------AFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTT------------------------TTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHH------------------------HhCCcccCCEEECCCCcCCeeCH
Confidence 555554444455555555555555555544444 44444445555555555443222
Q ss_pred ccc---cCCCCCCEEeCcCCcccCcCchhhhcccc--cceeeccCCCCcC
Q 036879 590 DSL---GGLTSLNFLDMSSNNLSGEIPNSLKALSL--LKFLNLSFNGLQG 634 (1029)
Q Consensus 590 ~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~l~~N~l~~ 634 (1029)
..| ..+++|+.|||++|+|++..+..+..++. ++.|+|++|+|.+
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 223 34566666666666666554455555554 2556666666554
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=1.6e-19 Score=197.28 Aligned_cols=193 Identities=23% Similarity=0.358 Sum_probs=166.3
Q ss_pred cCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceee
Q 036879 427 LNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLS 506 (1029)
Q Consensus 427 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 506 (1029)
+.++..+.+..+.+++.. .+..+++|++|++++|.++.. ..+..+++|+.|++++|++++..+ +..+++|++|+
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 344556677788877533 356789999999999999865 348889999999999999997665 99999999999
Q ss_pred ccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccc
Q 036879 507 LGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQG 586 (1029)
Q Consensus 507 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 586 (1029)
|++|+++++ ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++
T Consensus 97 l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 999999874 3489999999999999999964 5688999999999999999865 678999999999999999997
Q ss_pred cCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCC
Q 036879 587 SIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQ 635 (1029)
Q Consensus 587 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 635 (1029)
..| +..+++|++|+|++|++++. + .+..+++|+.|++++|+++..
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 655 89999999999999999954 4 489999999999999999863
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=5.2e-19 Score=211.60 Aligned_cols=184 Identities=23% Similarity=0.401 Sum_probs=108.3
Q ss_pred CcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCcccccccccccccee
Q 036879 426 NLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTL 505 (1029)
Q Consensus 426 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 505 (1029)
.+++|+.|+|++|.|.. ++ .+..+++|+.|+|++|++++..+ +..+++|+.|+|++|.+.+. ..+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEE
Confidence 34444444444444442 22 24444455555555554443333 44444444444444444431 245666666666
Q ss_pred eccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccccc
Q 036879 506 SLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQ 585 (1029)
Q Consensus 506 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 585 (1029)
+|++|+|+++ ..+..+++|+.|+|++|+|++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 6666666653 3466667777777777777643 456777777777777777775544 777777777777777777
Q ss_pred ccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccc
Q 036879 586 GSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLK 623 (1029)
Q Consensus 586 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 623 (1029)
+. ..+..+++|+.|+|++|++++.....+..+..+.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~ 224 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPN 224 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcCCcccccccEEecc
Confidence 53 3477777788888888877755444444443333
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.9e-18 Score=181.50 Aligned_cols=137 Identities=24% Similarity=0.258 Sum_probs=90.3
Q ss_pred cccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccc
Q 036879 500 ISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSL 579 (1029)
Q Consensus 500 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 579 (1029)
++|++|+|++|+|+++.|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 55666666666666666666666666666666666666555555666666666666666666555555666677777777
Q ss_pred ccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 580 ADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 580 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|++.|.++
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 777776 566666667777777777777776555666667777777777776665543
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=5.2e-19 Score=199.76 Aligned_cols=176 Identities=22% Similarity=0.225 Sum_probs=149.9
Q ss_pred cceeccccccccccccccCCcCcCcEEEecCcccccccccccc-CCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 407 DVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIG-RLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 407 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
+.+++++++++ .+|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57999999999 5676554 4689999999999987788887 999999999999999999999999999999999999
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccc---cccccccEEEccCCcCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEI---GNLKVVTKIDLSRNDLSG 562 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 562 (1029)
|+|+...+..|..+++|++|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888999999999999999999999999999999999999999999996555555 567888888888888886
Q ss_pred CCCccccCccc--cccccccccccc
Q 036879 563 EIPSSIGDLKN--MQHLSLADNKFQ 585 (1029)
Q Consensus 563 ~~p~~~~~l~~--L~~L~L~~N~l~ 585 (1029)
..+..|..++. |+.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 55566666665 356666666665
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.9e-18 Score=180.22 Aligned_cols=116 Identities=21% Similarity=0.289 Sum_probs=63.7
Q ss_pred ccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccc
Q 036879 495 CLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNM 574 (1029)
Q Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 574 (1029)
.|..+++|++|+|++|+|+++.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|
T Consensus 51 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 130 (220)
T 2v9t_B 51 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNL 130 (220)
T ss_dssp SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCC
Confidence 33344444444444444444444444444555555555555544434444555555555555555555555556666666
Q ss_pred cccccccccccccCCccccCCCCCCEEeCcCCcccC
Q 036879 575 QHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 575 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 610 (1029)
+.|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 131 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 131 NLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 666666666665555556666666777777776653
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=1e-18 Score=209.00 Aligned_cols=194 Identities=25% Similarity=0.375 Sum_probs=140.5
Q ss_pred ccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEE
Q 036879 378 CKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGL 457 (1029)
Q Consensus 378 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 457 (1029)
+..+..+.++.+.+.+..+ +..+.. |+.|++++|.|... + .|..+++|+.|+|++|+|++..+ +..+++|+.|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~-L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNS-IDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTT-CCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCC-CCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3445556666666554333 233333 67777777777643 3 47777888888888888875444 7778888888
Q ss_pred EeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCccc
Q 036879 458 YLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLN 537 (1029)
Q Consensus 458 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 537 (1029)
+|++|.+++. ..+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|+|+
T Consensus 93 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 93 FLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp ECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred ECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 8888887653 2677778888888888888753 4577888888888888888865 56778888888888888888
Q ss_pred CcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccC
Q 036879 538 GTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSI 588 (1029)
Q Consensus 538 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 588 (1029)
+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+..
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred Cchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 6555 78888888888888888753 35788888888888888887543
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.4e-20 Score=224.08 Aligned_cols=190 Identities=20% Similarity=0.252 Sum_probs=135.0
Q ss_pred CCCCccceeccccccccCCCcccccCccccCeEeccCCc-------------CcccCCccccCCCcCcccc-cCCCcCcc
Q 036879 118 DSFPKLEHLYLDGNSFIGTIPPSICNISSLLTLDLSFNQ-------------LQGHVPSSILNIPSLLAID-LSNNQFSG 183 (1029)
Q Consensus 118 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-ls~N~l~~ 183 (1029)
...++|+.|+|++|+++ .+|+.++++++|+.|++++|. +.+.+|..+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566777777777776 667777777777777776654 4456667777777777777 6666543
Q ss_pred cCCCCCCCCCcccccccccccchhccccccccCCCCcccccccccceEEcccccccCCCCccccccccccceeecccccc
Q 036879 184 PMPSIYNTSPLQNIDMQYNSLAELHLAYNQLSGQIPSTLFECKQLKILSLSVNNFIGSIPREIGNITMLKGLYLVYTNLT 263 (1029)
Q Consensus 184 ~~~~~~~~~~l~~l~l~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 263 (1029)
.|..+.+++|.++...+ ..|+.|+|++|++++ +|. |+++++|+
T Consensus 424 -------------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~---------- 466 (567)
T 1dce_A 424 -------------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVT---------- 466 (567)
T ss_dssp -------------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCC----------
T ss_pred -------------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCc----------
Confidence 45666677777664222 247888888888875 565 66665544
Q ss_pred cccCcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCC-Cccccccccc
Q 036879 264 GEIQGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPI-PSSISNASML 342 (1029)
Q Consensus 264 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L 342 (1029)
.|+|++|+|+ .+|..+.++++|++|+|++|.++ .+| .+. .+++|++|+|++|+|++.. |..|..+++|
T Consensus 467 -------~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp-~l~-~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 467 -------HLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVA-NLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp -------EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGT-TCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred -------EeecCccccc-ccchhhhcCCCCCEEECCCCCCC-CCc-ccC-CCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 6777777777 66778888888888888888886 467 444 5888888888888888776 8888888888
Q ss_pred ceecCCCccccCCCC
Q 036879 343 TLIDMPYNLFSGFIP 357 (1029)
Q Consensus 343 ~~L~ls~N~l~~~~p 357 (1029)
+.|++++|.+++.+|
T Consensus 536 ~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 536 VLLNLQGNSLCQEEG 550 (567)
T ss_dssp CEEECTTSGGGGSSS
T ss_pred CEEEecCCcCCCCcc
Confidence 888888888876554
No 367
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.8e-18 Score=179.03 Aligned_cols=157 Identities=22% Similarity=0.269 Sum_probs=118.8
Q ss_pred cEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCc
Q 036879 431 TTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFN 510 (1029)
Q Consensus 431 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 510 (1029)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ +..|..+++|++|+|++|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~-----------------------~~~~~~l~~L~~L~L~~N 67 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEA-----------------------TGIFKKLPQLRKINFSNN 67 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECC-----------------------CCCGGGCTTCCEEECCSS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCc-----------------------hhhhccCCCCCEEECCCC
Confidence 46777777777 3454443 245666666666653321 234667777777777777
Q ss_pred cccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCc
Q 036879 511 RLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPD 590 (1029)
Q Consensus 511 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 590 (1029)
+|+++.+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|.
T Consensus 68 ~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 68 KITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred cCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 77777777788888888888888888877777788888888888888888877788888888888889989988887788
Q ss_pred cccCCCCCCEEeCcCCcccCcCc
Q 036879 591 SLGGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 591 ~~~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
.|..+++|++|+|++|.+++..+
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECSGG
T ss_pred HhcCCCCCCEEEecCcCCcCCCc
Confidence 88889999999999999886544
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.2e-20 Score=224.41 Aligned_cols=217 Identities=19% Similarity=0.183 Sum_probs=130.4
Q ss_pred ccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCC
Q 036879 376 TNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQ 455 (1029)
Q Consensus 376 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 455 (1029)
..+++|+.|+|++|+++ .+|..++++.+ |+.|++++|......|.. +..+.+.+..|..+..+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~-L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKE-LQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHH-HHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHH-HHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhcc
Confidence 45666777777777765 56666666665 666666554421111100 011123345566666666666
Q ss_pred EEE-eccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCC
Q 036879 456 GLY-LQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSN 534 (1029)
Q Consensus 456 ~L~-L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 534 (1029)
.|+ ++.|.+. +|..+.+.+|.++...+ ..|+.|+|++|+|++ +|. |..+++|+.|+|++|
T Consensus 413 ~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 666 5555442 33344444554443222 136667777777765 344 677777777777777
Q ss_pred cccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccC-CccccCCCCCCEEeCcCCcccCcCc
Q 036879 535 SLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSI-PDSLGGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 535 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
+|+ .+|..++.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 776 566677777777777777777764 45 6777777777777777777655 6777777777777777777775544
Q ss_pred h---hhhcccccceeec
Q 036879 614 N---SLKALSLLKFLNL 627 (1029)
Q Consensus 614 ~---~~~~l~~L~~L~l 627 (1029)
. .+..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 2 2334666766653
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.1e-18 Score=187.30 Aligned_cols=167 Identities=21% Similarity=0.311 Sum_probs=96.7
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCC
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDG 485 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 485 (1029)
+..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|++++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~------------------- 77 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD------------------- 77 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-------------------
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-------------------
Confidence 455566666665332 35555666666666666552 33 45555555555555555543
Q ss_pred CcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCC
Q 036879 486 NELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIP 565 (1029)
Q Consensus 486 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 565 (1029)
..+ +..+++|++|+|++|+++++.+ +.. ++|+.|+|++|++++. ..+..+++|+.|++++|++++. +
T Consensus 78 -----~~~--l~~l~~L~~L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 78 -----LSP--LKDLTKLEELSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V 144 (263)
T ss_dssp -----CGG--GTTCSSCCEEECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G
T ss_pred -----Chh--hccCCCCCEEECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h
Confidence 222 5555666666666666654322 112 6666666666666642 2466666666777777666643 2
Q ss_pred ccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCc
Q 036879 566 SSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 566 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 466666666666666666644 4566666777777777766644
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=6.6e-18 Score=181.35 Aligned_cols=171 Identities=23% Similarity=0.341 Sum_probs=119.0
Q ss_pred cccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 377 NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 377 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
.+.+++.+++++|.+++.. .+..+.. |+.|++++|+++. ++ .+..+++|++|+|++|+|++..+ +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~-L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSG-VQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTT-CSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCc-CcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 5778899999999998543 4666665 9999999999994 45 78999999999999999996544 999999999
Q ss_pred EEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcc
Q 036879 457 LYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSL 536 (1029)
Q Consensus 457 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 536 (1029)
|+|++|++++..... . ++|+.| +|++|+++++ ..+..+++|+.|+|++|++
T Consensus 90 L~L~~N~l~~l~~~~--~-~~L~~L------------------------~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 90 LSVNRNRLKNLNGIP--S-ACLSRL------------------------FLDNNELRDT--DSLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp EECCSSCCSCCTTCC--C-SSCCEE------------------------ECCSSCCSBS--GGGTTCTTCCEEECTTSCC
T ss_pred EECCCCccCCcCccc--c-CcccEE------------------------EccCCccCCC--hhhcCcccccEEECCCCcC
Confidence 999999997543211 1 444444 4555544432 2355555555555555555
Q ss_pred cCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccccccc
Q 036879 537 NGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGS 587 (1029)
Q Consensus 537 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 587 (1029)
++. + .++.+++|+.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 141 ~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 141 KSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 532 2 455666666666666666644 4566666667777777766643
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=4.4e-18 Score=173.45 Aligned_cols=130 Identities=22% Similarity=0.321 Sum_probs=69.6
Q ss_pred cEEecCCCcccCccccccccccccceeeccCccccCCCCC-CccCCCCCcEEEccCCcccCcCCccccccccccEEEccC
Q 036879 479 SEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPS-SLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSR 557 (1029)
Q Consensus 479 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 557 (1029)
+.+++++|+++ .+|..+.. +|++|+|++|+|+++.+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555554 33333322 555555555555554443 355555555555555555555555555555555555555
Q ss_pred CcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCc
Q 036879 558 NDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 558 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 555555555555555555555555555555555555555555555555555543
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.2e-17 Score=171.18 Aligned_cols=153 Identities=20% Similarity=0.272 Sum_probs=86.8
Q ss_pred CCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccce
Q 036879 425 GNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRT 504 (1029)
Q Consensus 425 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 504 (1029)
..+++|++|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--------------------------~~~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--------------------------YNPISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--------------------------CGGGTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--------------------------chhhhcCCCCCE
Confidence 55677788888888777 445 57777777777777776531 123455556666
Q ss_pred eeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCc-CCCCCCccccCccccccccccccc
Q 036879 505 LSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRND-LSGEIPSSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 505 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~ 583 (1029)
|++++|++++..+..+..+++|+.|++++|++++..|..++.+++|++|++++|. ++ .+| .+..+++|+.|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 6666666655555555555555555555555555455555555555555555555 33 233 34555555555555555
Q ss_pred ccccCCccccCCCCCCEEeCcCCccc
Q 036879 584 FQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 584 l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
+++ ++ .+..+++|++|++++|++.
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccC
Confidence 553 22 3445555555555555543
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=4.7e-18 Score=208.74 Aligned_cols=223 Identities=23% Similarity=0.261 Sum_probs=109.5
Q ss_pred cccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEE
Q 036879 379 KDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLY 458 (1029)
Q Consensus 379 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 458 (1029)
+.++.|+|.+|.+.. .+.. .++.++|+.|.|. .+++..|.+. ..+..|..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~------~l~~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA------LLQHKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCc-chhh------HhhcCccCccccc--------------Ccccccccee-cChhhhccCCCCcEEE
Confidence 445666666666553 1211 1344445544443 2234445554 4566666667777777
Q ss_pred eccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccC
Q 036879 459 LQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNG 538 (1029)
Q Consensus 459 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 538 (1029)
|++|.+. .++..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..|..+++|+.|+|++|.|+
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~- 306 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT- 306 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-
Confidence 7777766 33333446677777777777777 67788888899999999999988 56888889999999999999997
Q ss_pred cCCccccccccccEEEccCCcCCCCCCccccCccc-ccccccccccccccCCccccCCCCCCEEeCcCC--------ccc
Q 036879 539 TLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKN-MQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSN--------NLS 609 (1029)
Q Consensus 539 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~ 609 (1029)
.+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .|+
T Consensus 307 ~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~ 380 (727)
T 4b8c_D 307 TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQ 380 (727)
T ss_dssp CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------------
T ss_pred ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCcc
Confidence 67878999999999999999999888888766432 345889999999887754 456777777 333
Q ss_pred CcCchhhhcccccceeeccCCCCc
Q 036879 610 GEIPNSLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 610 ~~~~~~~~~l~~L~~L~l~~N~l~ 633 (1029)
+..+..+..+..+....+++|-+.
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---------------------CCC
T ss_pred ccccchhhcccccceeeeeccccc
Confidence 333344445555555566666554
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.4e-17 Score=170.53 Aligned_cols=154 Identities=15% Similarity=0.230 Sum_probs=129.7
Q ss_pred cCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcE
Q 036879 449 GRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILN 528 (1029)
Q Consensus 449 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 528 (1029)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-------------------------~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-------------------------DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCS-------------------------CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-------------------------ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCE
Confidence 45566677777766664 334 57788899999999998764 347889999999
Q ss_pred EEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccc-ccccCCccccCCCCCCEEeCcCCc
Q 036879 529 VNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNK-FQGSIPDSLGGLTSLNFLDMSSNN 607 (1029)
Q Consensus 529 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 607 (1029)
|++++|++++..+..++.+++|++|++++|++++..|..+..+++|+.|+|++|+ ++ .+| .+..+++|++|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 9999999998889999999999999999999998888999999999999999998 66 555 68999999999999999
Q ss_pred ccCcCchhhhcccccceeeccCCCCcC
Q 036879 608 LSGEIPNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 608 l~~~~~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
+++. + .+..+++|+.|++++|++.+
T Consensus 171 i~~~-~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHDY-R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-T-TGGGCSSCCEEEECBC----
T ss_pred CcCh-H-HhccCCCCCEEEeeCcccCC
Confidence 9964 4 78899999999999999864
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.9e-17 Score=165.70 Aligned_cols=155 Identities=27% Similarity=0.350 Sum_probs=110.8
Q ss_pred ceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCc-cccccccccEEEccCCcCCCCCCccccCccccccccccc
Q 036879 503 RTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPV-EIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLAD 581 (1029)
Q Consensus 503 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 581 (1029)
+++++++|.++. +|..+. .+|+.|++++|+|++..+. .|+.+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 677888888864 444443 2778888888888765554 477788888888888888877777788888888888888
Q ss_pred ccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCCCCCCCCccCcccccCCCCCCCCC
Q 036879 582 NKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHGGPFTNLSSQSFVGNKGLCGAP 660 (1029)
Q Consensus 582 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~ 660 (1029)
|+|++..+..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|+|+|..+......++....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 8888777777778888888888888888777777888888888888888887765532111223333455566667665
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=1.3e-17 Score=178.42 Aligned_cols=139 Identities=18% Similarity=0.236 Sum_probs=106.8
Q ss_pred CCCCCCceeccCcceEEEEEEe-cCCcE--EEEEEeecccch------------------------hhHHHHHHHHHHhc
Q 036879 738 DGFSENNLLGKGSFGSVYKGTL-SDGMQ--IAVKVFNLELEG------------------------TLRSFDAECEILGS 790 (1029)
Q Consensus 738 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~--vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~ 790 (1029)
.-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++++
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3367789999999999999998 68989 999987543111 11367899999999
Q ss_pred CCCCce--EEEEEEEecCCeEEEEEeccCC-C----CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcC
Q 036879 791 IRHRNL--VKIISTCSSDHFKALVLEYMPN-G----SLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCD 863 (1029)
Q Consensus 791 l~h~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~D 863 (1029)
+.|+++ +..+++ ...++||||+.+ | +|.++... .++..+..++.|++.|++|||. +.||+|||
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrD 196 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHAD 196 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSS
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCC
Confidence 988754 344432 245899999942 3 77776532 2244677899999999999993 33699999
Q ss_pred CCCCCEEECCCCcEEEEccCCceec
Q 036879 864 LNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 864 lk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
|||.|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999765
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.6e-17 Score=185.09 Aligned_cols=215 Identities=11% Similarity=0.064 Sum_probs=102.9
Q ss_pred hcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEecccc----ccCcccccccCCCCCc-E
Q 036879 406 MDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNK----LQGSITTDLCGLRSLS-E 480 (1029)
Q Consensus 406 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L~-~ 480 (1029)
|+.|+|.+ +++.+.+.+|.++++|+.|++++|.+..+.+.+|..+.++..+.+..+. ........|.++..|+ .
T Consensus 103 L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~ 181 (329)
T 3sb4_A 103 LEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETT 181 (329)
T ss_dssp CCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEE
T ss_pred CcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccccee
Confidence 44444444 4444444455555555555555555554445555555444444444321 1222333444444444 2
Q ss_pred EecCCCcccCcccccc----ccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEcc
Q 036879 481 FYSDGNELNGSLPQCL----DSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLS 556 (1029)
Q Consensus 481 L~l~~N~l~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 556 (1029)
+.+.... .++..+ -...++..+.+.++-...........+++|+.|+|++|+++.+.+..|.++++|+.|+|.
T Consensus 182 i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 182 IQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred EEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 2222211 011111 122334444443331110000001124555555555555555555555666666666665
Q ss_pred CCcCCCCCCccccCccccc-ccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceee
Q 036879 557 RNDLSGEIPSSIGDLKNMQ-HLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLN 626 (1029)
Q Consensus 557 ~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 626 (1029)
+| ++.+.+..|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|++++|+++.+.+.+|.++++|+.++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 55 5444455566666666 666655 55544556666666666666666666655555666666666654
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=5.4e-17 Score=180.80 Aligned_cols=100 Identities=8% Similarity=-0.017 Sum_probs=45.4
Q ss_pred CCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCc-EEEccCCcccCcCCccccccccccEEEc
Q 036879 477 SLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDIL-NVNLSSNSLNGTLPVEIGNLKVVTKIDL 555 (1029)
Q Consensus 477 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 555 (1029)
+|+.+++.+|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .+++++ .++.+.+.+|.++++|+.|++
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 3333333333333333344444444444444444 4444444444444444 444444 344344444555555555555
Q ss_pred cCCcCCCCCCccccCcccccccc
Q 036879 556 SRNDLSGEIPSSIGDLKNMQHLS 578 (1029)
Q Consensus 556 s~N~l~~~~p~~~~~l~~L~~L~ 578 (1029)
++|.++.+.+..|.++++|+.++
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 55555444444555555555443
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=1e-16 Score=163.28 Aligned_cols=131 Identities=27% Similarity=0.388 Sum_probs=107.9
Q ss_pred ceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccc
Q 036879 503 RTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADN 582 (1029)
Q Consensus 503 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 582 (1029)
+.+++++|.++. +|..+ .++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 567888888875 44433 257888888888888 56788888889999999999998877788888999999999999
Q ss_pred cccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 583 KFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 583 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|+|.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9988777888889999999999999987777778888899999998888887543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=5.8e-16 Score=154.14 Aligned_cols=133 Identities=22% Similarity=0.239 Sum_probs=85.9
Q ss_pred cccceeeccCcccc-CCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccc
Q 036879 500 ISLRTLSLGFNRLT-SVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLS 578 (1029)
Q Consensus 500 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 578 (1029)
++|+.|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 44555566666666666666666643 5566666666677777766655666666667777777
Q ss_pred cccccccccC-CccccCCCCCCEEeCcCCcccCcCc---hhhhcccccceeeccCCCCcC
Q 036879 579 LADNKFQGSI-PDSLGGLTSLNFLDMSSNNLSGEIP---NSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 579 L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
|++|+|++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 7777776432 1566677777777777777775544 466777777777777777653
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=7.2e-16 Score=153.47 Aligned_cols=136 Identities=25% Similarity=0.280 Sum_probs=104.7
Q ss_pred CCCcEEecCCCccc-CccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEE
Q 036879 476 RSLSEFYSDGNELN-GSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKID 554 (1029)
Q Consensus 476 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 554 (1029)
++|+.|++++|+++ +.+|..+..+++|++|+|++|.++++ ..+..+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 45666677888888888888888865 7788888888888888888876777777788899999
Q ss_pred ccCCcCCCCC-CccccCcccccccccccccccccCC---ccccCCCCCCEEeCcCCcccCcCch
Q 036879 555 LSRNDLSGEI-PSSIGDLKNMQHLSLADNKFQGSIP---DSLGGLTSLNFLDMSSNNLSGEIPN 614 (1029)
Q Consensus 555 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~ 614 (1029)
|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.++ .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 9999888543 2678888999999999999985544 47888899999999999887 4443
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=7.2e-16 Score=150.09 Aligned_cols=129 Identities=21% Similarity=0.254 Sum_probs=102.5
Q ss_pred ccccceeeccCcccc-CCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccc
Q 036879 499 LISLRTLSLGFNRLT-SVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHL 577 (1029)
Q Consensus 499 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 577 (1029)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..++.+++|++|++++|.+++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367777888888877 56677777888888888888888754 677888888888888888887677777778888888
Q ss_pred cccccccccc-CCccccCCCCCCEEeCcCCcccCcCc---hhhhcccccceeeccC
Q 036879 578 SLADNKFQGS-IPDSLGGLTSLNFLDMSSNNLSGEIP---NSLKALSLLKFLNLSF 629 (1029)
Q Consensus 578 ~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~ 629 (1029)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888863 34778888899999999999887666 5788888899888864
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.2e-15 Score=151.35 Aligned_cols=132 Identities=24% Similarity=0.275 Sum_probs=82.0
Q ss_pred ceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccc
Q 036879 503 RTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADN 582 (1029)
Q Consensus 503 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 582 (1029)
+.+++++|+++.+ |..+ .++|+.|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4555566665543 2222 245666666666666555555666666666666666666555555666666666777666
Q ss_pred cccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCcCCCC
Q 036879 583 KFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVP 637 (1029)
Q Consensus 583 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 637 (1029)
+|++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|++++.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6665555556666677777777777765555556666677777777776666544
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.9e-15 Score=153.78 Aligned_cols=127 Identities=20% Similarity=0.285 Sum_probs=111.7
Q ss_pred EEecccccccccCCccCCCCcCCCeEeccCcccccCCccccccccCCceeecccccccCCCCCCcCCCCCccceeccccc
Q 036879 52 ALNLAYMGLLGTIPPELGNLSFLSLLNVTNNSFSGTLPIQLSNLRRLKYLSFRSNNFSSIEIPPWLDSFPKLEHLYLDGN 131 (1029)
Q Consensus 52 ~l~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~p~~~~~l~~L~~L~Ls~N 131 (1029)
.++++++++. ++|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+.+. +..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~-~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLS-NQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCC-TTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeC-HhHccCCCCCCEEECCCC
Confidence 3566677776 7887764 68999999999998 88899999999999999999999743 567999999999999999
Q ss_pred cccCCCcccccCccccCeEeccCCcCcccCCccccCCCcCcccccCCCcCcc
Q 036879 132 SFIGTIPPSICNISSLLTLDLSFNQLQGHVPSSILNIPSLLAIDLSNNQFSG 183 (1029)
Q Consensus 132 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 183 (1029)
+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998777889999999999999999996666679999999999999999863
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=8.7e-15 Score=166.40 Aligned_cols=241 Identities=10% Similarity=0.132 Sum_probs=151.5
Q ss_pred ccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEe
Q 036879 380 DLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYL 459 (1029)
Q Consensus 380 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 459 (1029)
+|+.+.+..+ ++.....+|.+. .|+.+.+.. .++.+.+.+|.++++|+.++|.+|+++.+...+|. ..+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~--~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS--TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC--CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCCC--CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 3555555444 333333344442 255566654 45545566777777777777777777755455555 467777777
Q ss_pred ccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCccc--
Q 036879 460 QHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLN-- 537 (1029)
Q Consensus 460 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-- 537 (1029)
.++ ++.+...+|.++++|+.+.+.+| ++.+...+|.+ .+|+.+.+ .|.++.+...+|.++++|+.+.+.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 644 66666677777777777777654 55566666666 66777777 34456566677777777777777766654
Q ss_pred ---CcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCch
Q 036879 538 ---GTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPN 614 (1029)
Q Consensus 538 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 614 (1029)
.+.+..|.++++|+.++|. +.++.+....|.++.+|+.++|..| ++...+.+|.++ +|+.|++++|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 3455667777777777776 3465555666777777777777444 554556667777 777777777776655556
Q ss_pred hhhccc-ccceeeccCCCC
Q 036879 615 SLKALS-LLKFLNLSFNGL 632 (1029)
Q Consensus 615 ~~~~l~-~L~~L~l~~N~l 632 (1029)
.|.+++ .++.|++..+.+
T Consensus 364 ~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SCCCSCTTCCEEEECGGGH
T ss_pred cccCCCCCccEEEeCHHHH
Confidence 666663 456666655443
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=1.9e-14 Score=163.54 Aligned_cols=205 Identities=13% Similarity=0.173 Sum_probs=97.9
Q ss_pred cccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCccccccccccccCCCCCCE
Q 036879 377 NCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQG 456 (1029)
Q Consensus 377 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 456 (1029)
+|++|+.+++++|+++......|. .. .|+.+.+.. .++.+...+|.++++|+.++|..| ++.+...+|.+ .+|+.
T Consensus 178 ~c~~L~~l~l~~n~l~~I~~~aF~-~~-~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~ 252 (401)
T 4fdw_A 178 YCYNLKKADLSKTKITKLPASTFV-YA-GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITT 252 (401)
T ss_dssp TCTTCCEEECTTSCCSEECTTTTT-TC-CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSE
T ss_pred CcccCCeeecCCCcceEechhhEe-ec-ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccE
Confidence 444555555555544422222222 12 244444442 244444555666666666666553 34344445554 45666
Q ss_pred EEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcc
Q 036879 457 LYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSL 536 (1029)
Q Consensus 457 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 536 (1029)
+.+ .|.++.+...+|.++++|+.+.+.+|.+. .+.+..+.+.+|.++++|+.+.|. +.+
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~-------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN-------------------DDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC-------------------CCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred EEe-CCCccEEChhHhhCCCCCCEEEeCCcccc-------------------CCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 665 33344444455555555555554444332 000012344445555555555554 234
Q ss_pred cCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCC-CCCEEeCcCCccc
Q 036879 537 NGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLT-SLNFLDMSSNNLS 609 (1029)
Q Consensus 537 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 609 (1029)
+.+...+|.++++|+.++|..| ++.+.+..|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 4444445555555555555333 443444555555 555555555555544445555552 4566666655543
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.5e-15 Score=147.73 Aligned_cols=128 Identities=25% Similarity=0.287 Sum_probs=97.5
Q ss_pred CCCcEEecCCCccc-CccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEE
Q 036879 476 RSLSEFYSDGNELN-GSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKID 554 (1029)
Q Consensus 476 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 554 (1029)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45555555555555 45666677777888888888887765 6777888888888888888876777777788888888
Q ss_pred ccCCcCCCC-CCccccCcccccccccccccccccCC---ccccCCCCCCEEeCcC
Q 036879 555 LSRNDLSGE-IPSSIGDLKNMQHLSLADNKFQGSIP---DSLGGLTSLNFLDMSS 605 (1029)
Q Consensus 555 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~ 605 (1029)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|++||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888753 34778888888899999998886555 4678888899888864
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=2.7e-16 Score=174.03 Aligned_cols=143 Identities=16% Similarity=0.157 Sum_probs=103.0
Q ss_pred HHHHHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccc--------------hh--------hHHHHHHHHHHh
Q 036879 732 ELFRATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELE--------------GT--------LRSFDAECEILG 789 (1029)
Q Consensus 732 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~--------------~~--------~~~~~~E~~~l~ 789 (1029)
.+.....-|++.+.||+|+||.||+|...+|+.||||+++.... .. .....+|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 34344445899999999999999999998999999998753210 00 011245677777
Q ss_pred cCCCCceE--EEEEEEecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCC
Q 036879 790 SIRHRNLV--KIISTCSSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPS 867 (1029)
Q Consensus 790 ~l~h~niv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~ 867 (1029)
++.+.++. ..+++ . ..++||||++|++|.++.. . .....++.|++.++.||| +.|||||||||.
T Consensus 169 rL~~~gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~ 234 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ--S--RHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLA---KHGLIHGDFNEF 234 (397)
T ss_dssp HHHHTTCSCCCEEEE--E--TTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTT
T ss_pred HHHhcCCCCCeeeec--c--CceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHH
Confidence 77544432 22222 1 2369999999988865321 1 234567899999999999 678999999999
Q ss_pred CEEECCCC----------cEEEEccCCceec
Q 036879 868 NILLNESM----------VACLSDFGISKLL 888 (1029)
Q Consensus 868 Nill~~~~----------~~kl~Dfg~a~~~ 888 (1029)
|||+++++ .+.|+||+-+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 99998776 3899999977643
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=1.1e-14 Score=146.08 Aligned_cols=132 Identities=21% Similarity=0.257 Sum_probs=104.8
Q ss_pred cEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCC
Q 036879 479 SEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRN 558 (1029)
Q Consensus 479 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 558 (1029)
+.+++++|+++. +|..+ .++|++|++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 344555555543 33322 257888888888888777777888888888888888888777777888999999999999
Q ss_pred cCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCc
Q 036879 559 DLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIP 613 (1029)
Q Consensus 559 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 613 (1029)
++++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9987777778889999999999999997666667889999999999999987655
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.1e-15 Score=147.41 Aligned_cols=132 Identities=16% Similarity=0.209 Sum_probs=80.5
Q ss_pred cccccccceeeccCccccCCCCCCccCCC-CCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccc
Q 036879 496 LDSLISLRTLSLGFNRLTSVIPSSLWSLR-DILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNM 574 (1029)
Q Consensus 496 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 574 (1029)
+..+++|+.|++++|+++.+ |. +..+. +|+.|+|++|.|++. ..+..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34455566666666666543 33 33333 666666666666643 456666666666666666664444444666677
Q ss_pred cccccccccccccCCc--cccCCCCCCEEeCcCCcccCcCch----hhhcccccceeeccCCCCc
Q 036879 575 QHLSLADNKFQGSIPD--SLGGLTSLNFLDMSSNNLSGEIPN----SLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 575 ~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~ 633 (1029)
+.|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|. .+..+++|+.||+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777765 3444 5666777777777777776 3344 3667777777777777654
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=2.5e-13 Score=155.08 Aligned_cols=319 Identities=9% Similarity=0.076 Sum_probs=196.1
Q ss_pred EEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCc
Q 036879 271 VLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYN 350 (1029)
Q Consensus 271 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 350 (1029)
.+.|.+ .++.+...+|.++++|+.++|..+ +. .++...|.+..+|+.+.+..+ +.......|.++..+........
T Consensus 75 ~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~ 150 (394)
T 4fs7_A 75 EIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGV 150 (394)
T ss_dssp EEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTC
T ss_pred EEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeecccccccccCccc
Confidence 444542 355455667777777777777644 43 566666666777777666544 33344455555543333222222
Q ss_pred cccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcC
Q 036879 351 LFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNL 430 (1029)
Q Consensus 351 ~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L 430 (1029)
..-+ -.+|.++++|+.+.+.++. .......|.+... |+.+.+..+ ++.....+|.+...|
T Consensus 151 ~~i~-----------------~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~-L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 151 TVIG-----------------DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGK-LKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp CEEC-----------------TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTT-CCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred cccc-----------------hhhhcccCCCcEEecCCcc-ceeccccccCCCC-ceEEEcCCC-ceEeCchhhcccccc
Confidence 1110 1235677788888886553 2234444555544 777777665 454556677777778
Q ss_pred cEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCc
Q 036879 431 TTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFN 510 (1029)
Q Consensus 431 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 510 (1029)
+.+.+..+... +...+....+|+.+.+..+ ++.+....|.+...|+.+.+..+... ....+|..+..++.+....+
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 77777766543 2333444567777777543 34455667777777777777766443 56667777777777777665
Q ss_pred cccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCc
Q 036879 511 RLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPD 590 (1029)
Q Consensus 511 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 590 (1029)
.+ ....|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+....|.++.+|+.+++..| ++.....
T Consensus 287 ~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 287 IV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp EE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred ee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 43 3356777777777777654 55556667777777777777644 55455667777777777777666 6655566
Q ss_pred cccCCCCCCEEeCcCCcccCcCchhhhccccccee
Q 036879 591 SLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFL 625 (1029)
Q Consensus 591 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 625 (1029)
+|.++.+|+.+++..+ ++ .+...|.+.++|+.+
T Consensus 361 aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777777777777654 33 234556666666543
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=2.4e-16 Score=161.60 Aligned_cols=134 Identities=22% Similarity=0.272 Sum_probs=105.2
Q ss_pred ccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcc
Q 036879 493 PQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLK 572 (1029)
Q Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 572 (1029)
|..+..+++|++|+|++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++ +| .+..++
T Consensus 41 ~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~ 115 (198)
T 1ds9_A 41 DATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLV 115 (198)
T ss_dssp HHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHH
T ss_pred hHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCC
Confidence 3477888888888888888876 45 7788888888888888888 567777778888888888888885 44 578888
Q ss_pred cccccccccccccccCC-ccccCCCCCCEEeCcCCcccCcCch----------hhhcccccceeeccCCCCc
Q 036879 573 NMQHLSLADNKFQGSIP-DSLGGLTSLNFLDMSSNNLSGEIPN----------SLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 573 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~l~~N~l~ 633 (1029)
+|+.|+|++|++++..+ ..+..+++|++|++++|++++.+|. .+..+++|+.|| +|+++
T Consensus 116 ~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 89999999998885332 4678888899999999988876554 377888888886 66665
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.8e-14 Score=144.51 Aligned_cols=129 Identities=16% Similarity=0.170 Sum_probs=93.1
Q ss_pred CCCCcEEecCCCcccCccccccccc-cccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEE
Q 036879 475 LRSLSEFYSDGNELNGSLPQCLDSL-ISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKI 553 (1029)
Q Consensus 475 l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 553 (1029)
..+|++|++++|+++. ++. +..+ ++|++|+|++|+|+++ ..|..+++|+.|+|++|+|++..+..+..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3344444444444442 233 3333 3788888888888765 577788888888888888886555555888888888
Q ss_pred EccCCcCCCCCCc--cccCcccccccccccccccccCCcc----ccCCCCCCEEeCcCCccc
Q 036879 554 DLSRNDLSGEIPS--SIGDLKNMQHLSLADNKFQGSIPDS----LGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 554 ~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~ 609 (1029)
++++|+++ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|++||+++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888886 4554 7888888999999999988 45654 788899999999999876
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.2e-13 Score=137.47 Aligned_cols=105 Identities=22% Similarity=0.278 Sum_probs=49.8
Q ss_pred cceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccc
Q 036879 502 LRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLAD 581 (1029)
Q Consensus 502 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 581 (1029)
.+.+++++|+++. +|..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3455566655554 23222 24455555555555544444444555555555555555444344444444444444444
Q ss_pred ccccccCCccccCCCCCCEEeCcCCccc
Q 036879 582 NKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 582 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
|+|++..+..|..+++|++|+|++|+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 4444333334444444444444444444
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=9.5e-16 Score=157.07 Aligned_cols=156 Identities=22% Similarity=0.293 Sum_probs=108.5
Q ss_pred cCCcCcCcEEEecCccccccccc------cccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccc
Q 036879 424 IGNLNNLTTLHLETNELTGSIPK------AIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLD 497 (1029)
Q Consensus 424 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 497 (1029)
+.....++.++++.+.+++..|. .|..+++|++|++++|.+++ +| .+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-------------------------l~-~~~ 67 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-------------------------IS-SLS 67 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-------------------------CC-CHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-------------------------cc-ccc
Confidence 33445666666666666655554 66666666666666666653 33 566
Q ss_pred cccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCC-ccccCcccccc
Q 036879 498 SLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIP-SSIGDLKNMQH 576 (1029)
Q Consensus 498 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 576 (1029)
.+++|++|++++|+++. +|..+..+++|+.|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.
T Consensus 68 ~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 68 GMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 66777777777777763 45566666777777777777775 34 57778888888888888874332 46788888888
Q ss_pred cccccccccccCCcc----------ccCCCCCCEEeCcCCcccC
Q 036879 577 LSLADNKFQGSIPDS----------LGGLTSLNFLDMSSNNLSG 610 (1029)
Q Consensus 577 L~L~~N~l~~~~~~~----------~~~l~~L~~L~Ls~N~l~~ 610 (1029)
|++++|++++.+|.. +..+++|+.|| +|.++.
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 888888888766553 77888999887 777763
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.45 E-value=1.5e-12 Score=148.66 Aligned_cols=318 Identities=11% Similarity=0.062 Sum_probs=222.7
Q ss_pred ccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeecCcccCCCCCcccccccccceecCCCccccCCCCC
Q 036879 279 LTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLIDMPYNLFSGFIPN 358 (1029)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 358 (1029)
++.+-..+|.++.+|+.+.|.. .++ .++...|.++.+|+.++|.++ ++.+....|.+++.|+.+.+..+- ......
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l-~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLML-KSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTC-CEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCce-eeecce
Confidence 4556677899999999999974 465 788888888999999999765 666777888888888888776552 222222
Q ss_pred CCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccCCcCcCcEEEecCc
Q 036879 359 SLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIGNLNNLTTLHLETN 438 (1029)
Q Consensus 359 ~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N 438 (1029)
+| ..+..+....... +.......|.+... |+.+.+.++. ......+|.++.+|+.+++..|
T Consensus 135 aF---------------~~~~~~~~~~~~~--~~~i~~~aF~~c~~-L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 135 AF---------------KGCDFKEITIPEG--VTVIGDEAFATCES-LEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TT---------------TTCCCSEEECCTT--CCEECTTTTTTCTT-CCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT
T ss_pred ee---------------ecccccccccCcc--ccccchhhhcccCC-CcEEecCCcc-ceeccccccCCCCceEEEcCCC
Confidence 22 2332222222222 12123344555554 7777776543 3355667888888888888766
Q ss_pred cccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCC
Q 036879 439 ELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPS 518 (1029)
Q Consensus 439 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (1029)
++.+...+|.++..|+.+.+..+... ....+....+|+.+.+..+ +......+|..+..|+.+.+..+..+ +...
T Consensus 196 -~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~ 270 (394)
T 4fs7_A 196 -LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGS 270 (394)
T ss_dssp -CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSC
T ss_pred -ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eecc
Confidence 44455677778888888877766542 2233334467777777543 34456677888888888888877554 6777
Q ss_pred CccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCC
Q 036879 519 SLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSL 598 (1029)
Q Consensus 519 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 598 (1029)
.|.....++.+....+.+. ...|..+.+|+.+.+.++ ++.+....|.++.+|+.++|..+ ++.....+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 8888888888888776543 456788889999988765 65566778888999999999754 765667888889999
Q ss_pred CEEeCcCCcccCcCchhhhcccccceeeccCC
Q 036879 599 NFLDMSSNNLSGEIPNSLKALSLLKFLNLSFN 630 (1029)
Q Consensus 599 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 630 (1029)
+.+++..| ++.+...+|.++++|+.+++..+
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 99999877 77677788999999999888654
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2.7e-13 Score=135.24 Aligned_cols=87 Identities=23% Similarity=0.268 Sum_probs=42.2
Q ss_pred ccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeec
Q 036879 548 KVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNL 627 (1029)
Q Consensus 548 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 627 (1029)
++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444555555555555554433333444555555555555555444444555555555555
Q ss_pred cCCCCcC
Q 036879 628 SFNGLQG 634 (1029)
Q Consensus 628 ~~N~l~~ 634 (1029)
++|+|.+
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 5555444
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=8.5e-13 Score=131.16 Aligned_cols=111 Identities=21% Similarity=0.235 Sum_probs=97.0
Q ss_pred CCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCc
Q 036879 525 DILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMS 604 (1029)
Q Consensus 525 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 604 (1029)
..+.|++++|+++. +|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35789999999984 666553 789999999999998888899999999999999999997777778999999999999
Q ss_pred CCcccCcCchhhhcccccceeeccCCCCcCCCCC
Q 036879 605 SNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 605 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
+|+|++..+..|..+++|+.|+|++|++++.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9999988778899999999999999999987653
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=1.2e-12 Score=130.40 Aligned_cols=106 Identities=20% Similarity=0.265 Sum_probs=89.5
Q ss_pred ceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCcccccccccccc
Q 036879 503 RTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADN 582 (1029)
Q Consensus 503 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 582 (1029)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 678888888874 455443 78889999999999888888999999999999999999766677889999999999999
Q ss_pred cccccCCccccCCCCCCEEeCcCCcccCc
Q 036879 583 KFQGSIPDSLGGLTSLNFLDMSSNNLSGE 611 (1029)
Q Consensus 583 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 611 (1029)
+|++..+..|..+++|++|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99976666799999999999999999844
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=5.6e-14 Score=158.16 Aligned_cols=168 Identities=23% Similarity=0.249 Sum_probs=87.2
Q ss_pred cCcCcEEEecCccccccccccccCC-----CCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccc
Q 036879 427 LNNLTTLHLETNELTGSIPKAIGRL-----QKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLIS 501 (1029)
Q Consensus 427 l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 501 (1029)
+++|+.|+|++|.|+......+... ++|++|+|++|.++......+. ..+++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~-----------------------~~L~~ 127 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLL-----------------------PVFLR 127 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTH-----------------------HHHHT
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHH-----------------------HHHHh
Confidence 3567788888887774333333322 5677777777776533222221 12334
Q ss_pred cceeeccCccccCCCCCCc-----cCCCCCcEEEccCCcccCc----CCccccccccccEEEccCCcCCCCC----Cccc
Q 036879 502 LRTLSLGFNRLTSVIPSSL-----WSLRDILNVNLSSNSLNGT----LPVEIGNLKVVTKIDLSRNDLSGEI----PSSI 568 (1029)
Q Consensus 502 L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~ 568 (1029)
|+.|+|++|.|+......+ ...++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 5555555555543222222 1234555566666555431 2223345556666666666665322 3334
Q ss_pred cCcccccccccccccccccC----CccccCCCCCCEEeCcCCcccCcCchhhh
Q 036879 569 GDLKNMQHLSLADNKFQGSI----PDSLGGLTSLNFLDMSSNNLSGEIPNSLK 617 (1029)
Q Consensus 569 ~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 617 (1029)
...++|+.|+|++|.|++.. +..+...++|++|||++|.|+......+.
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 44556666666666665432 23333456677777777776654444443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=1.4e-10 Score=132.25 Aligned_cols=133 Identities=11% Similarity=0.160 Sum_probs=69.6
Q ss_pred ccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccC
Q 036879 491 SLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGD 570 (1029)
Q Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 570 (1029)
....+|.++..|+.+.+..+.. .+...+|.++.+|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+....|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 4445566666666666654433 2455566666666666664 3344445555666666666666543 44344555666
Q ss_pred cccccccccccccccccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCC
Q 036879 571 LKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFN 630 (1029)
Q Consensus 571 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 630 (1029)
+.+|+.+.|..+ ++.....+|.++.+|+.+++.+|.... ..+.....|+.+.+..|
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 666666666443 443444566666666666666654331 23444455555555444
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=7.6e-14 Score=157.06 Aligned_cols=185 Identities=14% Similarity=0.165 Sum_probs=106.6
Q ss_pred hhcceeccccccccccccccCCc-----CcCcEEEecCccccccccccc-cCCCCCCEEEeccccccCccccccc-----
Q 036879 405 AMDVLYLSACNIKGSIPSEIGNL-----NNLTTLHLETNELTGSIPKAI-GRLQKLQGLYLQHNKLQGSITTDLC----- 473 (1029)
Q Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~----- 473 (1029)
.++.|+|++|.|+......+... ++|++|+|++|.|+......+ ..+++|++|+|++|.++......++
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 48899999999986555554433 799999999999985433333 3467899999999998755444432
Q ss_pred CCCCCcEEecCCCcccCccccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCc----CCcccccccc
Q 036879 474 GLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGT----LPVEIGNLKV 549 (1029)
Q Consensus 474 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 549 (1029)
..++|++|+|++|.|+...... ++..+...++|++|+|++|.|++. ++..+...++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~--------------------l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~ 212 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAV--------------------LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQ 212 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHH--------------------HHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSC
T ss_pred cCCccceeeCCCCCCChHHHHH--------------------HHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCC
Confidence 2345555555555554321111 122223444455555555555432 2334455566
Q ss_pred ccEEEccCCcCCCCC----CccccCcccccccccccccccccCCccccCC---C--CCCEEe--CcCCccc
Q 036879 550 VTKIDLSRNDLSGEI----PSSIGDLKNMQHLSLADNKFQGSIPDSLGGL---T--SLNFLD--MSSNNLS 609 (1029)
Q Consensus 550 L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l---~--~L~~L~--Ls~N~l~ 609 (1029)
|+.|+|++|.|++.. +..+...++|+.|+|++|.|++.....+..+ . .|+.+. +..|.++
T Consensus 213 L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 213 LQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred cCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 777777777666432 2333445677777777777775544444332 1 155665 5555554
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=1.2e-11 Score=138.58 Aligned_cols=132 Identities=16% Similarity=0.128 Sum_probs=85.1
Q ss_pred eeeccCc-cccCCCCCCccCCCCCcEEEccC-CcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccc
Q 036879 504 TLSLGFN-RLTSVIPSSLWSLRDILNVNLSS-NSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLAD 581 (1029)
Q Consensus 504 ~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 581 (1029)
.++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 6764 444 77777777777775 777766666777777777777777777777777777777777777777
Q ss_pred ccccccCCccccCCCCCCEEeCcCCcccCcCc-hhhhcccccceeeccCCCCcCCCCC
Q 036879 582 NKFQGSIPDSLGGLTSLNFLDMSSNNLSGEIP-NSLKALSLLKFLNLSFNGLQGQVPH 638 (1029)
Q Consensus 582 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~ 638 (1029)
|+|++..+..|..++ |+.|+|++|++...-. .+|..........+..+.+++..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777755555555554 7778888877764322 2333333333344445556555444
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=5.3e-12 Score=141.51 Aligned_cols=132 Identities=17% Similarity=0.179 Sum_probs=108.4
Q ss_pred cEEEccCC-cccCcCCccccccccccEEEccC-CcCCCCCCccccCcccccccccccccccccCCccccCCCCCCEEeCc
Q 036879 527 LNVNLSSN-SLNGTLPVEIGNLKVVTKIDLSR-NDLSGEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMS 604 (1029)
Q Consensus 527 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 604 (1029)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45789998 8985 777 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcccCcCchhhhcccccceeeccCCCCcCCCCCC--CCCCccCcccccCCCCCCCCCC
Q 036879 605 SNNLSGEIPNSLKALSLLKFLNLSFNGLQGQVPHG--GPFTNLSSQSFVGNKGLCGAPE 661 (1029)
Q Consensus 605 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~~l~~~~~~~n~~~c~~~~ 661 (1029)
+|+|++.++..|..++ |+.|+|.+|+|.+...-. ..+.......+..+...|.+|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 9999988877887776 999999999999865421 0111112233445677787764
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.22 E-value=3.7e-10 Score=128.70 Aligned_cols=309 Identities=10% Similarity=0.151 Sum_probs=204.8
Q ss_pred ccEEEccCCcccCCCCCCcccCCCCcEEEccCcc---cCCCCCchhhhcccccceEeecCcccCCCCCccccccccccee
Q 036879 269 LQVLALSSNRLTGVIPPEIINISSLTVLSLTANN---LLGNLPSNIGHSLPNLQQLILGGNRLTGPIPSSISNASMLTLI 345 (1029)
Q Consensus 269 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 345 (1029)
|+.+.+-+ .++.+-..+|.++++|+.+.++.|. ++ .+....|....+|+.+.+..+ ++.+....|..+.+|+.+
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 33455543 3555667788888888888887664 43 566777766777887777654 554666777888888888
Q ss_pred cCCCccccCCCCCCCCCCCCCcccccccccccccccceeeccCCcCCCCCCccccCchhhhcceeccccccccccccccC
Q 036879 346 DMPYNLFSGFIPNSLGFCHPYDELGFLTSLTNCKDLRKLILSENPLSGVLPISIGNLSNAMDVLYLSACNIKGSIPSEIG 425 (1029)
Q Consensus 346 ~ls~N~l~~~~p~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L~~n~l~~~~p~~~~ 425 (1029)
.+..+... ... ..+..+..|+.+.+..+ +.......|.. . .|+.+.+..+-.. ....+|.
T Consensus 143 ~lp~~~~~-I~~---------------~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~-~l~~i~ip~~~~~-i~~~af~ 202 (394)
T 4gt6_A 143 TIPEGVTS-VAD---------------GMFSYCYSLHTVTLPDS-VTAIEERAFTG-T-ALTQIHIPAKVTR-IGTNAFS 202 (394)
T ss_dssp ECCTTCCE-ECT---------------TTTTTCTTCCEEECCTT-CCEECTTTTTT-C-CCSEEEECTTCCE-ECTTTTT
T ss_pred cccceeee-ecc---------------cceecccccccccccce-eeEeccccccc-c-ceeEEEECCcccc-cccchhh
Confidence 87654321 111 12446677777777654 33233334433 2 2666666654333 5566788
Q ss_pred CcCcCcEEEecCcccccccccc--------------ccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCc
Q 036879 426 NLNNLTTLHLETNELTGSIPKA--------------IGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGS 491 (1029)
Q Consensus 426 ~l~~L~~L~L~~N~l~~~~~~~--------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 491 (1029)
+..+++......+.... .... +.....+..+.+. +.++.+...+|.++.+|+.+.+.++.. .+
T Consensus 203 ~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I 279 (394)
T 4gt6_A 203 ECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SI 279 (394)
T ss_dssp TCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EE
T ss_pred hccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccc-ee
Confidence 88888888777665542 2211 1122334444443 334456677889999999999876654 37
Q ss_pred cccccccccccceeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCc
Q 036879 492 LPQCLDSLISLRTLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDL 571 (1029)
Q Consensus 492 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 571 (1029)
...+|.++++|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.+....|.++
T Consensus 280 ~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C 356 (394)
T 4gt6_A 280 GTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNC 356 (394)
T ss_dssp CTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTC
T ss_pred cCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCC
Confidence 77889999999999996 5677788889999999999999865 66677789999999999999765 665667889999
Q ss_pred ccccccccccccccccCCccccCCCCCCEEeCcCCccc
Q 036879 572 KNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 572 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
.+|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 357 ~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 357 TALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred CCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 999999999987652 46777889999998887664
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=2.7e-11 Score=129.89 Aligned_cols=145 Identities=17% Similarity=0.138 Sum_probs=115.6
Q ss_pred HHhCCCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEecCCeEEEEE
Q 036879 735 RATDGFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 735 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 813 (1029)
...+.|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 44567888888899999999999754 6899999987543233456889999999884 677889999999889999999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDH-------------------------------------- 855 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-------------------------------------- 855 (1029)
||++|.++.+... +......++.+++++++.||...
T Consensus 90 e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999987531 11234478899999999999711
Q ss_pred ------------------CCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 856 ------------------PTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 856 ------------------~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
..+++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799999775
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=3.5e-10 Score=121.05 Aligned_cols=137 Identities=17% Similarity=0.136 Sum_probs=101.5
Q ss_pred CCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCc--eEEEEEEEecCCeEEEEEecc
Q 036879 739 GFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRN--LVKIISTCSSDHFKALVLEYM 816 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~E~~ 816 (1029)
.|.+....+.|..+.||++...+|..+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333456669999998777888999997643 2356789999999985444 566888888888889999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDH----------------------------------------- 855 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~----------------------------------------- 855 (1029)
+|.++. . .. . ....++.++++.++.||...
T Consensus 98 ~G~~l~--~-~~---~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--S-SH---L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--T-SC---C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--c-Cc---C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998874 2 11 1 12356788888888888532
Q ss_pred --------------CCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 856 --------------PTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 856 --------------~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
..+++|||++|.||+++.++.+.|+|||.+..
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998877778999998753
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.99 E-value=1.7e-08 Score=114.35 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=28.8
Q ss_pred CcccEEEccCCcccCCCCCCcccCCCCcEEEccCcccCCCCCchhhhcccccceEeec
Q 036879 267 QGLQVLALSSNRLTGVIPPEIINISSLTVLSLTANNLLGNLPSNIGHSLPNLQQLILG 324 (1029)
Q Consensus 267 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~l~~L~~L~L~ 324 (1029)
.+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++ .++...|.+. +|+.+.+-
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~ 99 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGM 99 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECC
Confidence 3455555543 355455566666666666666533 43 5555555433 45555443
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.97 E-value=3.7e-08 Score=111.52 Aligned_cols=165 Identities=12% Similarity=0.095 Sum_probs=77.3
Q ss_pred cCCcCcCcEEEecCccccccccccccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccc
Q 036879 424 IGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLR 503 (1029)
Q Consensus 424 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 503 (1029)
+.....+..+.+..+.-. .....+....+|+.+.+..+ +..+....|.+...|+.+.+..+ ++.+...+|.++.+|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 333344444444433222 33444555555666655443 33344445555555555555433 3334444555555555
Q ss_pred eeeccCccccCCCCCCccCCCCCcEEEccCCcccCcCCccccccccccEEEccCCcCCCCCCccccCccccccccccccc
Q 036879 504 TLSLGFNRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNK 583 (1029)
Q Consensus 504 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 583 (1029)
.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~- 343 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS- 343 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-
Confidence 5555432 33344445555555555555555554444445555555555555433 33333444555555555555433
Q ss_pred ccccCCccccC
Q 036879 584 FQGSIPDSLGG 594 (1029)
Q Consensus 584 l~~~~~~~~~~ 594 (1029)
++.+...+|.+
T Consensus 344 v~~I~~~aF~~ 354 (379)
T 4h09_A 344 ITLIESGAFEG 354 (379)
T ss_dssp CCEECTTTTTT
T ss_pred cCEEchhHhhC
Confidence 33233344443
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.93 E-value=4.9e-11 Score=125.75 Aligned_cols=139 Identities=23% Similarity=0.247 Sum_probs=76.7
Q ss_pred CCceeeEEEcCCCCceEEEeccc---ccccccCCcc-C-----------------------CCCcCCCe--EeccCcccc
Q 036879 35 VCNWFGVTCSPRHRRVTALNLAY---MGLLGTIPPE-L-----------------------GNLSFLSL--LNVTNNSFS 85 (1029)
Q Consensus 35 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~~~~p~~-~-----------------------~~l~~L~~--L~l~~n~l~ 85 (1029)
-|+|.|+.|++...+|+.+...+ ..+.+.++++ + ...+.|.. ++++.|...
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 38999999998877887665544 3444555432 1 11222222 444555322
Q ss_pred ---cCCccccccccCCceeecccccccCCC-CCCcCCCCCccceeccccccccCCCcccccCcc--ccCeEeccCCcCcc
Q 036879 86 ---GTLPIQLSNLRRLKYLSFRSNNFSSIE-IPPWLDSFPKLEHLYLDGNSFIGTIPPSICNIS--SLLTLDLSFNQLQG 159 (1029)
Q Consensus 86 ---~~~p~~~~~l~~L~~L~l~~N~l~~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~ 159 (1029)
+.++....++++|++|+|++|+|+.+. +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 111222245666667777777666532 344555666666666666666643 2334443 66666666666665
Q ss_pred cCCc-------cccCCCcCcccc
Q 036879 160 HVPS-------SILNIPSLLAID 175 (1029)
Q Consensus 160 ~~p~-------~~~~l~~L~~L~ 175 (1029)
.+|. .+..+|+|+.||
T Consensus 235 ~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 235 TFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCcchhHHHHHHHHCcccCeEC
Confidence 5542 244556665554
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=9.7e-10 Score=122.36 Aligned_cols=184 Identities=13% Similarity=0.137 Sum_probs=97.0
Q ss_pred ccCCcCcCcEEEecCcccc---------ccccccccCCCCCCEEEecccc-ccCcccccccCCCCCcEEecCCCcccCcc
Q 036879 423 EIGNLNNLTTLHLETNELT---------GSIPKAIGRLQKLQGLYLQHNK-LQGSITTDLCGLRSLSEFYSDGNELNGSL 492 (1029)
Q Consensus 423 ~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 492 (1029)
+...+++|+.|.+..+... +.+...+..+|+|+.|+|++|. +. . +. + .+++|+.|.+..+.+....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~-l-~~-~-~~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS-I-GK-K-PRPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB-C-CS-C-BCTTCSEEEEECSBCCHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce-e-cc-c-cCCCCcEEEEecCCCChHH
Confidence 3445667777777654321 1233455667778888877763 21 1 11 2 2556666666655554333
Q ss_pred ccccc--cccccceeeccC--ccccCCCCCCccCCCCCcEEEccCCcccCcCCccc--cccccccEEEccCCcCCCCCCc
Q 036879 493 PQCLD--SLISLRTLSLGF--NRLTSVIPSSLWSLRDILNVNLSSNSLNGTLPVEI--GNLKVVTKIDLSRNDLSGEIPS 566 (1029)
Q Consensus 493 ~~~~~--~l~~L~~L~Ls~--N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~ 566 (1029)
...+. .+++|+.|+|+. |...+.. .+.+ +...+ ..+++|+.|+|++|.+++..+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~------------------~~~~-l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDG------------------DMNV-FRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCS------------------CGGG-TGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccch------------------hHHH-HHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 33333 455565555542 1111000 0000 00111 2356677777777666533322
Q ss_pred cc---cCcccccccccccccccccC----CccccCCCCCCEEeCcCCcccCcCchhhhc-ccccceeeccCCC
Q 036879 567 SI---GDLKNMQHLSLADNKFQGSI----PDSLGGLTSLNFLDMSSNNLSGEIPNSLKA-LSLLKFLNLSFNG 631 (1029)
Q Consensus 567 ~~---~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~l~~N~ 631 (1029)
.+ ..+++|+.|+|+.|.|++.. +..+..+++|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 22 24677788888877777642 333345678888888888877544444433 2 3557888776
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.84 E-value=4.7e-09 Score=117.95 Aligned_cols=142 Identities=12% Similarity=0.203 Sum_probs=107.2
Q ss_pred CCceeccCcceEEEEEEecCCcEEEEEEee--ccc-chhhHHHHHHHHHHhcCC--CCceEEEEEEEecC---CeEEEEE
Q 036879 742 ENNLLGKGSFGSVYKGTLSDGMQIAVKVFN--LEL-EGTLRSFDAECEILGSIR--HRNLVKIISTCSSD---HFKALVL 813 (1029)
Q Consensus 742 ~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~ 813 (1029)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45779999999999998754 678888775 322 123457889999999996 45688899988776 4578999
Q ss_pred eccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 036879 814 EYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDH-------------------------------------- 855 (1029)
Q Consensus 814 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-------------------------------------- 855 (1029)
||++|..+.+. ....++..++..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99998877431 2234678888899999999999999631
Q ss_pred -----------------CCCcEEcCCCCCCEEECCCCc--EEEEccCCcee
Q 036879 856 -----------------PTPIIHCDLNPSNILLNESMV--ACLSDFGISKL 887 (1029)
Q Consensus 856 -----------------~~givH~Dlk~~Nill~~~~~--~kl~Dfg~a~~ 887 (1029)
..+++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998864
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=9e-10 Score=122.63 Aligned_cols=169 Identities=20% Similarity=0.275 Sum_probs=108.1
Q ss_pred cccCCCCCCEEEeccccccCcccccccCCCCCcEEecCCCcccCccccccccccccceeeccCcc-ccCCCCCCccCCCC
Q 036879 447 AIGRLQKLQGLYLQHNKLQGSITTDLCGLRSLSEFYSDGNELNGSLPQCLDSLISLRTLSLGFNR-LTSVIPSSLWSLRD 525 (1029)
Q Consensus 447 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~ 525 (1029)
+...+++|+.|.+..+...... + +... .+.+...+..+++|+.|+|++|. +. .+. + .+++
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~---i-----------s~~~-~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~-~~~~ 194 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQE---I-----------SWIE-QVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-K-PRPN 194 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCC---G-----------GGCB-CCBCHHHHHTCTTCCEEEEECCBTCB--CCS-C-BCTT
T ss_pred hhhhcchhhheeecCcchhhcc---c-----------cccc-ccCHHHHHhcCCCCcEEEEeCCCCce--ecc-c-cCCC
Confidence 3556778888888765332100 0 0000 01233455667778888887763 22 222 3 3778
Q ss_pred CcEEEccCCcccCcCCcccc--ccccccEEEccC--CcCCCC-----CCccc--cCcccccccccccccccccCCcccc-
Q 036879 526 ILNVNLSSNSLNGTLPVEIG--NLKVVTKIDLSR--NDLSGE-----IPSSI--GDLKNMQHLSLADNKFQGSIPDSLG- 593 (1029)
Q Consensus 526 L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~- 593 (1029)
|+.|+|..+.++......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+++..+..+.
T Consensus 195 L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~ 274 (362)
T 2ra8_A 195 LKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE 274 (362)
T ss_dssp CSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH
T ss_pred CcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh
Confidence 88888888887644333443 678888888863 221111 11122 2478999999999999864443332
Q ss_pred --CCCCCCEEeCcCCcccCcC----chhhhcccccceeeccCCCCcC
Q 036879 594 --GLTSLNFLDMSSNNLSGEI----PNSLKALSLLKFLNLSFNGLQG 634 (1029)
Q Consensus 594 --~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~ 634 (1029)
.+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.++.
T Consensus 275 a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 275 SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 5789999999999998643 3444678999999999998874
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.76 E-value=9.3e-09 Score=112.55 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=123.6
Q ss_pred CceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcC-CCCc--eEEEEEEEecCC---eEEEEEecc
Q 036879 743 NNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSI-RHRN--LVKIISTCSSDH---FKALVLEYM 816 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lV~E~~ 816 (1029)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+ .+.. +.+.+......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56889986433 3456789999999887 3332 445555543333 458999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 036879 817 PNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDH----------------------------------------- 855 (1029)
Q Consensus 817 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~----------------------------------------- 855 (1029)
+|.++.+... ..++..++..++.++++.++.||...
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 23567778888889999998888511
Q ss_pred --------------CCCcEEcCCCCCCEEECC--CCcEEEEccCCceecCCCCCceeccc----cCC-------ccc--c
Q 036879 856 --------------PTPIIHCDLNPSNILLNE--SMVACLSDFGISKLLGDETSMTQTQT----LAT-------IGY--M 906 (1029)
Q Consensus 856 --------------~~givH~Dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~----~gt-------~~y--~ 906 (1029)
...++|+|++|.||+++. ...+.++||+.+.............. .+. .+| .
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 145899999999999998 56688999999875432111100000 000 011 1
Q ss_pred C-ccCC--CCCCcchhHHHHHHHHHhcCCCCCC
Q 036879 907 A-PEWK--LSRKGDVYSYGIILMETFTKKKPTD 936 (1029)
Q Consensus 907 a-PE~~--~~~~~DvwSlGvil~elltg~~p~~ 936 (1029)
. |+.. .....+.|++|.++|++.+|+.+|.
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 2221 1112589999999999999988763
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=1.1e-08 Score=107.82 Aligned_cols=105 Identities=22% Similarity=0.289 Sum_probs=67.2
Q ss_pred ccCCCCCcE--EEccCCccc---CcCCccccccccccEEEccCCcCCC--CCCccccCcccccccccccccccccCCccc
Q 036879 520 LWSLRDILN--VNLSSNSLN---GTLPVEIGNLKVVTKIDLSRNDLSG--EIPSSIGDLKNMQHLSLADNKFQGSIPDSL 592 (1029)
Q Consensus 520 ~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 592 (1029)
|...+.|.. ++++.|+.. +..+....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444444444 555666433 1112222456778888888888876 3345666788888888888888754 223
Q ss_pred cCCC--CCCEEeCcCCcccCcCc-------hhhhcccccceee
Q 036879 593 GGLT--SLNFLDMSSNNLSGEIP-------NSLKALSLLKFLN 626 (1029)
Q Consensus 593 ~~l~--~L~~L~Ls~N~l~~~~~-------~~~~~l~~L~~L~ 626 (1029)
..+. +|++|+|++|.+++.+| ..+..+|+|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 88899999998887665 2467788888775
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.38 E-value=9.5e-07 Score=97.18 Aligned_cols=137 Identities=17% Similarity=0.206 Sum_probs=102.6
Q ss_pred CCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCC----CceEEEEEEEecCCeEEEEEe
Q 036879 739 GFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRH----RNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lV~E 814 (1029)
.+...+.++.|....||+. |..+++|+.... .....+.+|+++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 677899976432 223568899999888865 234455554 45689999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 036879 815 YMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHP-------------------------------------- 856 (1029)
Q Consensus 815 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-------------------------------------- 856 (1029)
|++|.++.+... ..++..+...++.++++.++.||....
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864331 235666777888888888888885422
Q ss_pred ----------------------CCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 857 ----------------------TPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 857 ----------------------~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
..++|+|++|.||+++.+..+.|+||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999767799999988643
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=6.3e-08 Score=97.17 Aligned_cols=117 Identities=10% Similarity=0.119 Sum_probs=57.4
Q ss_pred cccccccccccceeeccCc-cccCC----CCCCccCCCCCcEEEccCCcccCcC----CccccccccccEEEccCCcCCC
Q 036879 492 LPQCLDSLISLRTLSLGFN-RLTSV----IPSSLWSLRDILNVNLSSNSLNGTL----PVEIGNLKVVTKIDLSRNDLSG 562 (1029)
Q Consensus 492 ~~~~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~ 562 (1029)
+...+...+.|++|+|++| .|... +...+...++|++|+|++|.|+... ...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445566677777777777 66532 2233444556666666666665321 2223334555666666665553
Q ss_pred C----CCccccCccccccccc--ccccccccC----CccccCCCCCCEEeCcCCcc
Q 036879 563 E----IPSSIGDLKNMQHLSL--ADNKFQGSI----PDSLGGLTSLNFLDMSSNNL 608 (1029)
Q Consensus 563 ~----~p~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l 608 (1029)
. +...+...+.|++|+| ++|.|+... ...+...+.|++|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2 1223333444555555 444444321 12222234444444444444
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=2.5e-08 Score=100.07 Aligned_cols=116 Identities=18% Similarity=0.180 Sum_probs=70.8
Q ss_pred CCccCCCCCcEEEccCC-cccCc----CCccccccccccEEEccCCcCCCCC----CccccCccccccccccccccccc-
Q 036879 518 SSLWSLRDILNVNLSSN-SLNGT----LPVEIGNLKVVTKIDLSRNDLSGEI----PSSIGDLKNMQHLSLADNKFQGS- 587 (1029)
Q Consensus 518 ~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~- 587 (1029)
..+...+.|++|+|++| .|... +...+...++|++|+|++|.|.... ...+...++|++|+|++|.|++.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34555677777777777 66632 2333455567777777777776432 22334446677777777777653
Q ss_pred ---CCccccCCCCCCEEeC--cCCcccCcC----chhhhcccccceeeccCCCCc
Q 036879 588 ---IPDSLGGLTSLNFLDM--SSNNLSGEI----PNSLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 588 ---~~~~~~~l~~L~~L~L--s~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 633 (1029)
+...+...+.|++|+| ++|.|+... ...+...+.|+.|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2445555667777777 667776432 233444567777777777664
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=5.8e-06 Score=88.48 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=99.2
Q ss_pred eeccCcce-EEEEEEec-CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEecCCeEEEEEeccCCCCH
Q 036879 745 LLGKGSFG-SVYKGTLS-DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSSDHFKALVLEYMPNGSL 821 (1029)
Q Consensus 745 ~lg~G~fg-~V~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gsL 821 (1029)
.+..|..| .||+.... ++..+++|+-... ....+.+|+++++.+. +-.|.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45566666 68988765 5678999986533 4567888999998884 33477888999989999999999999888
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------------
Q 036879 822 ENWMYNKNRSFDILQRLNMVIDVASALEYLHYD----------------------------------------------- 854 (1029)
Q Consensus 822 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~----------------------------------------------- 854 (1029)
.+..... ......+..+++..++.||..
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7754321 123345666777777777742
Q ss_pred --------CCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 855 --------HPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 855 --------~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
....++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999887778999998753
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=3.4e-06 Score=90.82 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=61.4
Q ss_pred CCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCC---ceEEEEEEEecCCeEEEEEeccC
Q 036879 741 SENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHR---NLVKIISTCSSDHFKALVLEYMP 817 (1029)
Q Consensus 741 ~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~~~ 817 (1029)
...+.+|.|.++.||++...+|+.++||+...........+..|++.++.+++. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999996543333346789999999999765 577887763 3589999999
Q ss_pred CCCH
Q 036879 818 NGSL 821 (1029)
Q Consensus 818 ~gsL 821 (1029)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8874
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=5.7e-06 Score=90.18 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=96.9
Q ss_pred CceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCC---ceEEEEEEEe-cCCeEEEEEeccCC
Q 036879 743 NNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHR---NLVKIISTCS-SDHFKALVLEYMPN 818 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~E~~~~ 818 (1029)
.+.++.|....||+. |..+++|+... ......+.+|+++++.+.+. .|.+.+.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888999999987 57788898532 23456789999999999642 3566676664 45667899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 036879 819 GSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYD-------------------------------------------- 854 (1029)
Q Consensus 819 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-------------------------------------------- 854 (1029)
.++.+... ..++..+...++.++++.++.||..
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88876321 1234455555666666666666642
Q ss_pred -------------CCCCcEEcCCCCCCEEECC---CCc-EEEEccCCcee
Q 036879 855 -------------HPTPIIHCDLNPSNILLNE---SMV-ACLSDFGISKL 887 (1029)
Q Consensus 855 -------------~~~givH~Dlk~~Nill~~---~~~-~kl~Dfg~a~~ 887 (1029)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 455 58999997754
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=1.4e-05 Score=89.28 Aligned_cols=142 Identities=9% Similarity=0.131 Sum_probs=90.5
Q ss_pred CCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCc--eEEEEEEEecC-CeEEEEEeccC
Q 036879 741 SENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRN--LVKIISTCSSD-HFKALVLEYMP 817 (1029)
Q Consensus 741 ~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~E~~~ 817 (1029)
...+.++.|....+|+... ++..+++|..... ..+..|+.+++.+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456789999999999875 5788999987433 35888999998886433 56677776654 66899999998
Q ss_pred CCCHHHH---------------H---hcCC-C---C------------CCHHHH---------------------HHHHH
Q 036879 818 NGSLENW---------------M---YNKN-R---S------------FDILQR---------------------LNMVI 842 (1029)
Q Consensus 818 ~gsL~~~---------------l---~~~~-~---~------------~~~~~~---------------------~~i~~ 842 (1029)
|.++.+. + +... . . -.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 7655311 0 1100 0 0 001100 01111
Q ss_pred HHHHHHHHHHhc-CCCCcEEcCCCCCCEEECCCCcEEEEccCCceec
Q 036879 843 DVASALEYLHYD-HPTPIIHCDLNPSNILLNESMVACLSDFGISKLL 888 (1029)
Q Consensus 843 ~i~~~l~~Lh~~-~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 888 (1029)
.+....+++... ....++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 122222333211 1246899999999999988878889999988653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.04 E-value=3.7e-06 Score=94.09 Aligned_cols=79 Identities=8% Similarity=-0.006 Sum_probs=56.3
Q ss_pred cee-ccCcceEEEEEEec-------CCcEEEEEEeeccc---chhhHHHHHHHHHHhcCC-C--CceEEEEEEEecC---
Q 036879 744 NLL-GKGSFGSVYKGTLS-------DGMQIAVKVFNLEL---EGTLRSFDAECEILGSIR-H--RNLVKIISTCSSD--- 806 (1029)
Q Consensus 744 ~~l-g~G~fg~V~~~~~~-------~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 806 (1029)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88989999998764 26788999865432 112356788999988884 2 3577788887655
Q ss_pred CeEEEEEeccCCCCHH
Q 036879 807 HFKALVLEYMPNGSLE 822 (1029)
Q Consensus 807 ~~~~lV~E~~~~gsL~ 822 (1029)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4568999999886653
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.78 E-value=5.7e-05 Score=83.71 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=79.9
Q ss_pred ceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCC--CceEEEEE------EEecCCeEEEEEec
Q 036879 744 NLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRH--RNLVKIIS------TCSSDHFKALVLEY 815 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lV~E~ 815 (1029)
+.++.|..+.||+....+| .+++|+.... ...+..|+++++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987655 5899988752 1334455665555521 12333332 12346678899999
Q ss_pred cCCCCHH-----H---------HHhc--CCC--C---------CCHHHH-------------------------------
Q 036879 816 MPNGSLE-----N---------WMYN--KNR--S---------FDILQR------------------------------- 837 (1029)
Q Consensus 816 ~~~gsL~-----~---------~l~~--~~~--~---------~~~~~~------------------------------- 837 (1029)
++|..+. + .++. ... + ..|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986432 1 1111 100 0 122211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 838 LNMVIDVASALEYLHY----------DHPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 838 ~~i~~~i~~~l~~Lh~----------~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
..+..++.+++++|+. ....+++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224445666653 135789999999999999888899999999775
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.78 E-value=5.4e-05 Score=85.84 Aligned_cols=75 Identities=12% Similarity=0.057 Sum_probs=49.7
Q ss_pred CceeccCcceEEEEEEec-CCcEEEEEEeecccc-------hhhHHHHHHHHHHhcCCC--C-ceEEEEEEEecCCeEEE
Q 036879 743 NNLLGKGSFGSVYKGTLS-DGMQIAVKVFNLELE-------GTLRSFDAECEILGSIRH--R-NLVKIISTCSSDHFKAL 811 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~-~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 811 (1029)
.+.+|.|.++.||++... +++.|+||....... .....+..|+++++.+.. | .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467999999999999764 568899998653221 123456789999887732 3 344566543 344579
Q ss_pred EEeccCCC
Q 036879 812 VLEYMPNG 819 (1029)
Q Consensus 812 V~E~~~~g 819 (1029)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=5.2e-06 Score=80.88 Aligned_cols=87 Identities=15% Similarity=0.162 Sum_probs=54.6
Q ss_pred CCCCcEEEccCCcccCcCCccccccccccEEEccCCc-CCCCCCccccCc----cccccccccccc-ccccCCccccCCC
Q 036879 523 LRDILNVNLSSNSLNGTLPVEIGNLKVVTKIDLSRND-LSGEIPSSIGDL----KNMQHLSLADNK-FQGSIPDSLGGLT 596 (1029)
Q Consensus 523 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~ 596 (1029)
-..|+.||++++.|+...-..+..+++|+.|+|++|. |++..-..+..+ ++|++|+|++|. |++..-..+..++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3467777777777776555566677777777777774 554333444443 357777777763 6655445566667
Q ss_pred CCCEEeCcCCc-cc
Q 036879 597 SLNFLDMSSNN-LS 609 (1029)
Q Consensus 597 ~L~~L~Ls~N~-l~ 609 (1029)
+|++|+|+++. ++
T Consensus 140 ~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 NLKYLFLSDLPGVK 153 (176)
T ss_dssp TCCEEEEESCTTCC
T ss_pred CCCEEECCCCCCCC
Confidence 77777777763 44
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.68 E-value=8.4e-06 Score=79.42 Aligned_cols=84 Identities=18% Similarity=0.159 Sum_probs=49.1
Q ss_pred ccccEEEccCCcCCCCCCccccCccccccccccccc-ccccCCccccCC----CCCCEEeCcCC-cccCcCchhhhcccc
Q 036879 548 KVVTKIDLSRNDLSGEIPSSIGDLKNMQHLSLADNK-FQGSIPDSLGGL----TSLNFLDMSSN-NLSGEIPNSLKALSL 621 (1029)
Q Consensus 548 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N-~l~~~~~~~~~~l~~ 621 (1029)
..|+.||++++.++...-..+..+++|+.|+|++|. |++..-..++.+ ++|++|+|++| ++|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666665544555666666666666663 554443444443 25666666665 365544445556666
Q ss_pred cceeeccCCC
Q 036879 622 LKFLNLSFNG 631 (1029)
Q Consensus 622 L~~L~l~~N~ 631 (1029)
|+.|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666654
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.53 E-value=0.00036 Score=75.55 Aligned_cols=137 Identities=13% Similarity=0.111 Sum_probs=92.1
Q ss_pred CCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCC---CCceEEEEEEEecCCeEEEEEeccCC
Q 036879 742 ENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIR---HRNLVKIISTCSSDHFKALVLEYMPN 818 (1029)
Q Consensus 742 ~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~E~~~~ 818 (1029)
..+.|+.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+.+++++....+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 356799999999999876 4678889987643 3567889999998883 36788889888888889999999998
Q ss_pred CCHH--------H---HHhcCCC--C-------------------CCHHHHH---HHHHH----------------HH-H
Q 036879 819 GSLE--------N---WMYNKNR--S-------------------FDILQRL---NMVID----------------VA-S 846 (1029)
Q Consensus 819 gsL~--------~---~l~~~~~--~-------------------~~~~~~~---~i~~~----------------i~-~ 846 (1029)
..+. + .++.... . -+|.... ++..+ +. .
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 1 1122111 1 1343321 11111 11 1
Q ss_pred HHHHHHh-cCCCCcEEcCCCCCCEEECCCCcEEEEccC
Q 036879 847 ALEYLHY-DHPTPIIHCDLNPSNILLNESMVACLSDFG 883 (1029)
Q Consensus 847 ~l~~Lh~-~~~~givH~Dlk~~Nill~~~~~~kl~Dfg 883 (1029)
..+.|.. ....++||+|+.+.|++++.++ +.|+||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1223321 2246799999999999999887 8899974
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.29 E-value=0.00048 Score=74.11 Aligned_cols=79 Identities=16% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCCceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCC-C--CceEEEEEEEecCCeEEEEEec
Q 036879 739 GFSENNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIR-H--RNLVKIISTCSSDHFKALVLEY 815 (1029)
Q Consensus 739 ~~~~~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lV~E~ 815 (1029)
.....+.+|.|..+.||+.+..+|+.|.+|+...........+..|++.|+.+. . -.+.+.+++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 444567899999999999999999999999876544444456889999998884 2 2344555542 23689999
Q ss_pred cCCCCH
Q 036879 816 MPNGSL 821 (1029)
Q Consensus 816 ~~~gsL 821 (1029)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 877643
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.24 E-value=0.00077 Score=76.85 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=46.1
Q ss_pred CCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCCCC-------CCcchhHHHHHHHHH
Q 036879 856 PTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKLS-------RKGDVYSYGIILMET 928 (1029)
Q Consensus 856 ~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~DvwSlGvil~el 928 (1029)
...++|||++|.||+++.++ ++++||+.+..-............-...|.+|+.... ...++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 67899999999999999876 9999999987543221111000001123555544221 123445677777777
Q ss_pred hcCC
Q 036879 929 FTKK 932 (1029)
Q Consensus 929 ltg~ 932 (1029)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.08 E-value=0.00012 Score=72.65 Aligned_cols=41 Identities=10% Similarity=0.229 Sum_probs=19.7
Q ss_pred ccccccceeeccCc-cccCC----CCCCccCCCCCcEEEccCCccc
Q 036879 497 DSLISLRTLSLGFN-RLTSV----IPSSLWSLRDILNVNLSSNSLN 537 (1029)
Q Consensus 497 ~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 537 (1029)
.+-+.|+.|+|++| +|... +.+++..-+.|+.|+|++|+|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 34455666666653 55321 2233344445555555555554
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.00058 Score=63.36 Aligned_cols=56 Identities=23% Similarity=0.301 Sum_probs=30.1
Q ss_pred cccccccccc-ccCCccccCCCCCCEEeCcCCcccCcCchhhhcccccceeeccCCCCc
Q 036879 576 HLSLADNKFQ-GSIPDSLGGLTSLNFLDMSSNNLSGEIPNSLKALSLLKFLNLSFNGLQ 633 (1029)
Q Consensus 576 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 633 (1029)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|+|.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3444455543 12343333 35666666666666555556666666666655544443
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.05 E-value=0.0024 Score=69.82 Aligned_cols=155 Identities=12% Similarity=0.132 Sum_probs=86.5
Q ss_pred CHHHHHHHhCCCCC-----CceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCc--eEEEEE
Q 036879 729 SYQELFRATDGFSE-----NNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRN--LVKIIS 801 (1029)
Q Consensus 729 ~~~~~~~~~~~~~~-----~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~ 801 (1029)
+.+++......|.. .+.|+.|....+|+....+| .+++|+.... .....+..|+++++.+.... +.+++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 34444444445554 24566788889999987665 6889987652 12345667888877763212 233332
Q ss_pred E------EecCCeEEEEEeccCCCCHH-----HH---------HhcC----CCC----C---CHHHHHH-----------
Q 036879 802 T------CSSDHFKALVLEYMPNGSLE-----NW---------MYNK----NRS----F---DILQRLN----------- 839 (1029)
Q Consensus 802 ~------~~~~~~~~lV~E~~~~gsL~-----~~---------l~~~----~~~----~---~~~~~~~----------- 839 (1029)
. ....+..++||+|++|..+. .+ ++.. ... . .|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1 12245678999999876431 10 1111 000 0 1221100
Q ss_pred -HHHHHHHHHHHHHhc----CCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 840 -MVIDVASALEYLHYD----HPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 840 -i~~~i~~~l~~Lh~~----~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
+...+.+.+++++.. ...+++|+|+.+.||+++.+..+.++||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 24579999999999999987666899999775
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.99 E-value=0.00014 Score=72.13 Aligned_cols=42 Identities=10% Similarity=0.223 Sum_probs=25.0
Q ss_pred CcCcCcEEEecCc-ccccc----ccccccCCCCCCEEEeccccccCc
Q 036879 426 NLNNLTTLHLETN-ELTGS----IPKAIGRLQKLQGLYLQHNKLQGS 467 (1029)
Q Consensus 426 ~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 467 (1029)
+-+.|++|+|++| +|... +..++...+.|+.|+|++|.|...
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ 85 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDS 85 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChH
Confidence 3456777777764 66521 234455566677777777776533
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.92 E-value=0.0031 Score=69.02 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=82.2
Q ss_pred ceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCC--ceEEEEEE-----EecCCeEEEEEecc
Q 036879 744 NLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHR--NLVKIIST-----CSSDHFKALVLEYM 816 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lV~E~~ 816 (1029)
..++ |....||+....+|+.+++|...... .....+..|.++++.+... .+++++.. ....+..++|||++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 88889999887778789999986331 2345667788888777321 24444443 12245668899999
Q ss_pred CCCCHH-----HH---------Hhc--C------CCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 036879 817 PNGSLE-----NW---------MYN--K------NRSFDILQR----LNM---------------VIDVASALEYLHYD- 854 (1029)
Q Consensus 817 ~~gsL~-----~~---------l~~--~------~~~~~~~~~----~~i---------------~~~i~~~l~~Lh~~- 854 (1029)
+|..+. .+ ++. . ....++... ..+ ...+...++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875421 11 110 0 011222111 000 11112223333221
Q ss_pred ---CCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 855 ---HPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 855 ---~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
...+++|||+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245689999999999999 4 899999997754
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.86 E-value=0.0041 Score=68.32 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=75.0
Q ss_pred ceeccCcceE-EEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCC--CceEEEEEEEecCCeEEEEEeccCCCC
Q 036879 744 NLLGKGSFGS-VYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRH--RNLVKIISTCSSDHFKALVLEYMPNGS 820 (1029)
Q Consensus 744 ~~lg~G~fg~-V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~gs 820 (1029)
+.++.|+... +|+....+|..+++|...... ...+..|+++++.+.. -.+.+++.+....+ ++|||++++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554444 667765446778777654321 1344567777766632 23556666644444 68999997777
Q ss_pred HHHHHhcCC-------------------------CCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 036879 821 LENWMYNKN-------------------------RSFDILQRL-------N-------------MVIDVASALEYLH--- 852 (1029)
Q Consensus 821 L~~~l~~~~-------------------------~~~~~~~~~-------~-------------i~~~i~~~l~~Lh--- 852 (1029)
+.+++.... ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655442110 112211100 0 0011112222221
Q ss_pred hcCCCCcEEcCCCCCCEEECCC----CcEEEEccCCceec
Q 036879 853 YDHPTPIIHCDLNPSNILLNES----MVACLSDFGISKLL 888 (1029)
Q Consensus 853 ~~~~~givH~Dlk~~Nill~~~----~~~kl~Dfg~a~~~ 888 (1029)
.....+++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1135679999999999999874 78999999988653
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.71 E-value=0.0024 Score=71.03 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=82.3
Q ss_pred ceeccCcceEEEEEEec--------CCcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEecCCeEEEEEe
Q 036879 744 NLLGKGSFGSVYKGTLS--------DGMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 814 (1029)
+.+..|-...+|+.... +++.+++|+.... ........+|.++++.+. +.-..++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 56777888899998864 2478999986322 223455678999988883 3223566776653 28999
Q ss_pred ccCCCCHHH-----------H---H---hcC----CCCCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 036879 815 YMPNGSLEN-----------W---M---YNK----NRSFD--ILQRLNMVIDVAS-------------------ALEYLH 852 (1029)
Q Consensus 815 ~~~~gsL~~-----------~---l---~~~----~~~~~--~~~~~~i~~~i~~-------------------~l~~Lh 852 (1029)
|++|.++.. . + +.. .+... +.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998765421 0 0 111 11122 3444445544322 223332
Q ss_pred ----h-cCCCCcEEcCCCCCCEEECCC----CcEEEEccCCcee
Q 036879 853 ----Y-DHPTPIIHCDLNPSNILLNES----MVACLSDFGISKL 887 (1029)
Q Consensus 853 ----~-~~~~givH~Dlk~~Nill~~~----~~~kl~Dfg~a~~ 887 (1029)
. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123568999999999999876 7899999998753
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.63 E-value=0.0018 Score=70.14 Aligned_cols=128 Identities=14% Similarity=0.141 Sum_probs=75.3
Q ss_pred CceeccCcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCCCCce-EEEEEEEecCCeEEEEEecc-CCCC
Q 036879 743 NNLLGKGSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNL-VKIISTCSSDHFKALVLEYM-PNGS 820 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~-~~gs 820 (1029)
.+.|+.|....+|+. ..+++|+....... .....+|+++++.+...++ .+++++.. +.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 678999999999998 56888887643211 1233568877777632222 45555443 3346899999 6554
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------------
Q 036879 821 LENWMYNKNRSFDILQRLNMVIDVASALEYLHY----------------------------------------------- 853 (1029)
Q Consensus 821 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~----------------------------------------------- 853 (1029)
+....... +..++.++++.|+-+|.
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 42100000 00112222222222221
Q ss_pred ---cCCCCcEEcCCCCCCEEECCCCcEEEEccCCcee
Q 036879 854 ---DHPTPIIHCDLNPSNILLNESMVACLSDFGISKL 887 (1029)
Q Consensus 854 ---~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 887 (1029)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12345899999999999 5667789999998864
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.53 E-value=0.0037 Score=71.10 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=48.9
Q ss_pred CceeccCcceEEEEEEecC--------CcEEEEEEeecccchhhHHHHHHHHHHhcCCCCc-eEEEEEEEecCCeEEEEE
Q 036879 743 NNLLGKGSFGSVYKGTLSD--------GMQIAVKVFNLELEGTLRSFDAECEILGSIRHRN-LVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 813 (1029)
.+.|+.|....||++...+ +..+++|+.... .....+..|..+++.+...+ ..++++.+.. .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888889999998753 578999987432 11245557898888874223 3566776542 3899
Q ss_pred eccCCCC
Q 036879 814 EYMPNGS 820 (1029)
Q Consensus 814 E~~~~gs 820 (1029)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9997643
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.27 E-value=0.012 Score=58.65 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=67.6
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCceecCCCCCceecc
Q 036879 819 GSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISKLLGDETSMTQTQ 898 (1029)
Q Consensus 819 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 898 (1029)
-+|.+.+...+.++++.+++.++.|.+.+|.-.-..... ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------------
Confidence 389999999999999999999999999998776321111 1223457889999999988763 1110
Q ss_pred ccCCccccCccCCC---CCCcchhHHHHHHHHHhcCCCC
Q 036879 899 TLATIGYMAPEWKL---SRKGDVYSYGIILMETFTKKKP 934 (1029)
Q Consensus 899 ~~gt~~y~aPE~~~---~~~~DvwSlGvil~elltg~~p 934 (1029)
.....+.|||... +.+.=|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGYSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSSSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhccccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122456888754 5677899999999999885555
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.26 E-value=0.0048 Score=57.10 Aligned_cols=56 Identities=21% Similarity=0.369 Sum_probs=37.5
Q ss_pred EEEccCCcCC-CCCCccccCcccccccccccccccccCCccccCCCCCCEEeCcCCccc
Q 036879 552 KIDLSRNDLS-GEIPSSIGDLKNMQHLSLADNKFQGSIPDSLGGLTSLNFLDMSSNNLS 609 (1029)
Q Consensus 552 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 609 (1029)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 23444332 35777777777777655666777788888888888775
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.21 E-value=0.017 Score=63.39 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=42.9
Q ss_pred CcceEEEEEEecCCcEEEEEEeecccchhhHHHHHHHHHHhcCC---CCceEEEEEE------EecCCeEEEEEeccCCC
Q 036879 749 GSFGSVYKGTLSDGMQIAVKVFNLELEGTLRSFDAECEILGSIR---HRNLVKIIST------CSSDHFKALVLEYMPNG 819 (1029)
Q Consensus 749 G~fg~V~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lV~E~~~~g 819 (1029)
|....||+....+| .+++|+...... ..|+++++.+. -|.+++.+.. ....+..++||||++|.
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 33679999987777 899998765431 35666665552 2224455432 23356788999999887
Q ss_pred CH
Q 036879 820 SL 821 (1029)
Q Consensus 820 sL 821 (1029)
.+
T Consensus 107 ~~ 108 (339)
T 3i1a_A 107 NG 108 (339)
T ss_dssp BT
T ss_pred cC
Confidence 55
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.14 E-value=0.013 Score=66.91 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=47.8
Q ss_pred CceeccCcceEEEEEEecC-CcEEEEEEeecccchhhHHHHHHHHHHhcCCCCce-EEEEEEEecCCeEEEEEeccCCCC
Q 036879 743 NNLLGKGSFGSVYKGTLSD-GMQIAVKVFNLELEGTLRSFDAECEILGSIRHRNL-VKIISTCSSDHFKALVLEYMPNGS 820 (1029)
Q Consensus 743 ~~~lg~G~fg~V~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~gs 820 (1029)
.+.|+.|-...+|+....+ +..+++|+....... .-.-.+|..+++.+...++ .++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3568888889999998764 578889987433211 1122588999888854444 56777763 2 25999998754
Q ss_pred H
Q 036879 821 L 821 (1029)
Q Consensus 821 L 821 (1029)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.10 E-value=0.0061 Score=67.97 Aligned_cols=72 Identities=10% Similarity=0.241 Sum_probs=43.5
Q ss_pred ceeccCcceEEEEEEecC---------CcEEEEEEeecccchhhHHHHHHHHHHhcCCCCc-eEEEEEEEecCCeEEEEE
Q 036879 744 NLLGKGSFGSVYKGTLSD---------GMQIAVKVFNLELEGTLRSFDAECEILGSIRHRN-LVKIISTCSSDHFKALVL 813 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 813 (1029)
+.++.|....+|+....+ +..+++|+...... .......|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 457788888999998653 26888888754322 1123467888888774323 44666554 2 26899
Q ss_pred eccCCCC
Q 036879 814 EYMPNGS 820 (1029)
Q Consensus 814 E~~~~gs 820 (1029)
||++|.+
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.30 E-value=0.038 Score=61.60 Aligned_cols=139 Identities=17% Similarity=0.226 Sum_probs=81.2
Q ss_pred ceeccCcceEEEEEEecC--------CcEEEEEEeecccch------------------hhHHHHHHHHHHhcCC-CCce
Q 036879 744 NLLGKGSFGSVYKGTLSD--------GMQIAVKVFNLELEG------------------TLRSFDAECEILGSIR-HRNL 796 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~~--------~~~vAvK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 796 (1029)
+.+..|-...+|+....+ +..|.+++.-...+. .......|.++++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999988653 367888876433211 0112335888888874 4445
Q ss_pred EEEEEEEecCCeEEEEEeccCCCCHHH-------H----------HhcC----CCCCC--HHHHHHHHHHHH--------
Q 036879 797 VKIISTCSSDHFKALVLEYMPNGSLEN-------W----------MYNK----NRSFD--ILQRLNMVIDVA-------- 845 (1029)
Q Consensus 797 v~l~~~~~~~~~~~lV~E~~~~gsL~~-------~----------l~~~----~~~~~--~~~~~~i~~~i~-------- 845 (1029)
.++++++..+ +|+||++|-+|.. . ++.. .+... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5777776532 8999998654421 0 0111 11122 223333333221
Q ss_pred --------------HHH----HHHHh-cCCCCcEEcCCCCCCEEECCC------CcEEEEccCCce
Q 036879 846 --------------SAL----EYLHY-DHPTPIIHCDLNPSNILLNES------MVACLSDFGISK 886 (1029)
Q Consensus 846 --------------~~l----~~Lh~-~~~~givH~Dlk~~Nill~~~------~~~kl~Dfg~a~ 886 (1029)
+-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 134568999999999999876 789999999775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.07 E-value=0.11 Score=58.42 Aligned_cols=73 Identities=11% Similarity=0.230 Sum_probs=47.4
Q ss_pred ceeccCcceEEEEEEecC--------CcEEEEEEeecccchhhHHHHHHHHHHhcCC-CCceEEEEEEEecCCeEEEEEe
Q 036879 744 NLLGKGSFGSVYKGTLSD--------GMQIAVKVFNLELEGTLRSFDAECEILGSIR-HRNLVKIISTCSSDHFKALVLE 814 (1029)
Q Consensus 744 ~~lg~G~fg~V~~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E 814 (1029)
+.+..|-...+|+....+ +..+++|+..... ...-...+|.++++.+. +.-..++++.+. -+.|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 457778888999998753 5789999864332 22223467888888874 322445555442 268999
Q ss_pred ccCCCCH
Q 036879 815 YMPNGSL 821 (1029)
Q Consensus 815 ~~~~gsL 821 (1029)
|++|.++
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9988653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=85.24 E-value=0.39 Score=53.76 Aligned_cols=30 Identities=37% Similarity=0.406 Sum_probs=25.4
Q ss_pred CcEEcCCCCCCEEE------CCCCcEEEEccCCcee
Q 036879 858 PIIHCDLNPSNILL------NESMVACLSDFGISKL 887 (1029)
Q Consensus 858 givH~Dlk~~Nill------~~~~~~kl~Dfg~a~~ 887 (1029)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567899999998753
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.98 E-value=0.36 Score=55.10 Aligned_cols=61 Identities=11% Similarity=0.053 Sum_probs=18.2
Q ss_pred CCCceeccCcceEEEEEEecC-CcEEEE------EEeeccc--chhhHHHHHHHHHHhcCCCCceEEEEEEEe
Q 036879 741 SENNLLGKGSFGSVYKGTLSD-GMQIAV------KVFNLEL--EGTLRSFDAECEILGSIRHRNLVKIISTCS 804 (1029)
Q Consensus 741 ~~~~~lg~G~fg~V~~~~~~~-~~~vAv------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 804 (1029)
...+.+| ||.||+|.+.. ..+||| |..+... ......+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999998763 468888 7655322 223456888999999999999999987753
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=70.52 E-value=5 Score=39.79 Aligned_cols=122 Identities=12% Similarity=0.247 Sum_probs=80.9
Q ss_pred CCCceEEEEEEEecCCeEEEEEeccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEcCCCCCCEEE
Q 036879 792 RHRNLVKIISTCSSDHFKALVLEYMPNGSLENWMYNKNRSFDILQRLNMVIDVASALEYLHYDHPTPIIHCDLNPSNILL 871 (1029)
Q Consensus 792 ~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~givH~Dlk~~Nill 871 (1029)
.||+.+.. .+-.+.+...+.++.-+ ....| ..-+..+...+++++.+|+...++++ + =+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f--~~ik~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPF--DNIKSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEG--GGGGGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCH--HHHHhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEEE
Confidence 68888866 45566666555555433 22222 12345778899999999998886665 2 4788999999999
Q ss_pred CCCCcEEEEccCCceecCCCCCceeccccCCccccCccCCCCCCcchh-HHHHHHHHHhcCCCCCCccccccc
Q 036879 872 NESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKLSRKGDVY-SYGIILMETFTKKKPTDELFVGEI 943 (1029)
Q Consensus 872 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~Dvw-SlGvil~elltg~~p~~~~~~~~~ 943 (1029)
+.++.+++.-.|+-..+. |. ..+ ..|.| .+=+++..+++++..|++...+..
T Consensus 113 ~~~~~p~i~~RGik~~l~------------------P~-~~~-ee~fL~qyKAliiall~~K~~Fe~l~~G~l 165 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVD------------------PL-PVS-EAEFLTRYKALVICAFNEKQSFDALVEGNL 165 (215)
T ss_dssp CTTSCEEESCCEETTTBS------------------CC-CCC-HHHHHHHHHHHHHHHHCTTCCHHHHHHSCG
T ss_pred cCCCCEEEEEccCccCCC------------------CC-CCC-HHHHHHHHHHHHHHHHcCCCCHHHHHcChH
Confidence 999999998766543221 11 001 12333 467889999999999876544433
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=65.26 E-value=1 Score=31.92 Aligned_cols=11 Identities=18% Similarity=0.181 Sum_probs=4.7
Q ss_pred hhhheeeeccc
Q 036879 699 LSVVLIRRQKR 709 (1029)
Q Consensus 699 ~~~~~~~r~k~ 709 (1029)
++++++|||+.
T Consensus 30 ~~~~~~RRr~~ 40 (44)
T 2ks1_B 30 GIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHhhhhHh
Confidence 33444444443
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.86 E-value=21 Score=35.42 Aligned_cols=114 Identities=13% Similarity=0.170 Sum_probs=76.1
Q ss_pred CCCceEEEEEEEecCCeEEEEEeccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEEcCCCCCCE
Q 036879 792 RHRNLVKIISTCSSDHFKALVLEYMPNG-SLENWMYNKNRSFDILQRLNMVIDVASALE-YLHYDHPTPIIHCDLNPSNI 869 (1029)
Q Consensus 792 ~h~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~Lh~~~~~givH~Dlk~~Ni 869 (1029)
.||+. --.+-.+++...+.++.-+++ +.. .+ +..+...+++++.+|+...+ +++ .-+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 67887 333446677766666654333 333 23 34678889999988887776 554 358889999999
Q ss_pred EECCCCcEEEEccCCceecCCCCCceeccccCCccccCccCCCCCCcchh-HHHHHHHHHhcCCCCCCc
Q 036879 870 LLNESMVACLSDFGISKLLGDETSMTQTQTLATIGYMAPEWKLSRKGDVY-SYGIILMETFTKKKPTDE 937 (1029)
Q Consensus 870 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~Dvw-SlGvil~elltg~~p~~~ 937 (1029)
+++.++.+++.-.|+-..+ +|.- . ...|.| .+=+++..++.++..|++
T Consensus 116 ~f~~~~~p~i~hRGi~~~l------------------pP~e-~-~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL------------------PPDE-W-DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTTB------------------SSCS-C-CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCcccC------------------CCCC-C-CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877644322 2221 0 112333 467888999999988765
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.82 E-value=28 Score=29.74 Aligned_cols=16 Identities=13% Similarity=0.084 Sum_probs=6.9
Q ss_pred CccccccccccEEEcc
Q 036879 541 PVEIGNLKVVTKIDLS 556 (1029)
Q Consensus 541 p~~~~~l~~L~~L~Ls 556 (1029)
..+|.+|.+|+.+.+.
T Consensus 36 ~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 36 DGMFSGCTALEKLILT 51 (100)
T ss_dssp TTSSTTCTTCCCEEEC
T ss_pred HHHHhccCCccEEEEc
Confidence 3344444444444443
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=39.65 E-value=7.6 Score=27.49 Aligned_cols=10 Identities=30% Similarity=0.414 Sum_probs=4.2
Q ss_pred hhheeeeccc
Q 036879 700 SVVLIRRQKR 709 (1029)
Q Consensus 700 ~~~~~~r~k~ 709 (1029)
+++++|||+.
T Consensus 30 ~~~~~RRRr~ 39 (44)
T 2l2t_A 30 FAVYVRRKSI 39 (44)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHhhhhhh
Confidence 3444444433
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.60 E-value=69 Score=27.21 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=30.6
Q ss_pred ccccccccccCCcCcCcEEEecCccccccccccccCCCCCCEEEeccc
Q 036879 415 NIKGSIPSEIGNLNNLTTLHLETNELTGSIPKAIGRLQKLQGLYLQHN 462 (1029)
Q Consensus 415 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 462 (1029)
.++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444455667777777777777655 34355666777777777777654
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.91 E-value=14 Score=26.05 Aligned_cols=10 Identities=30% Similarity=0.564 Sum_probs=4.4
Q ss_pred hhheeeeccc
Q 036879 700 SVVLIRRQKR 709 (1029)
Q Consensus 700 ~~~~~~r~k~ 709 (1029)
+++++|||+.
T Consensus 31 ~~~~~RRR~~ 40 (44)
T 2jwa_A 31 FGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHCS
T ss_pred HHhheehhhh
Confidence 3444444443
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.76 E-value=9.6e+02 Score=27.60 Aligned_cols=46 Identities=22% Similarity=0.148 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHH--HHHHHHhcCCCCcEEcCCCCCCEEECCCCcEEEEccCCce
Q 036879 834 ILQRLNMVIDVAS--ALEYLHYDHPTPIIHCDLNPSNILLNESMVACLSDFGISK 886 (1029)
Q Consensus 834 ~~~~~~i~~~i~~--~l~~Lh~~~~~givH~Dlk~~Nill~~~~~~kl~Dfg~a~ 886 (1029)
+..+..++..+|- .+.|+=. =+|=.++||+++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILG-------igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILG-------VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeee-------ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 4445555555442 4555541 24778999999999999999999873
Done!