Your job contains 1 sequence.
>036883
FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK
ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI
QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM
RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGAKSIK
KVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036883
(277 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A8K979 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 310 3.2e-35 2
UNIPROTKB|F1P8R6 - symbol:ERI2 "Uncharacterized protein" ... 299 6.4e-34 2
MGI|MGI:1918401 - symbol:Eri2 "exoribonuclease 2" species... 302 1.3e-33 2
UNIPROTKB|E1BJE4 - symbol:ERI2 "Uncharacterized protein" ... 297 9.2e-33 2
UNIPROTKB|A6QLH5 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 356 1.4e-32 1
UNIPROTKB|O43414 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 356 1.4e-32 1
MGI|MGI:2153887 - symbol:Eri3 "exoribonuclease 3" species... 355 1.8e-32 1
UNIPROTKB|E2RAN5 - symbol:ERI3 "Uncharacterized protein" ... 352 3.7e-32 1
RGD|1583889 - symbol:Eri2 "ERI1 exoribonuclease family me... 296 8.0e-32 2
WB|WBGene00019724 - symbol:M02B7.2 species:6239 "Caenorha... 346 1.6e-31 1
ZFIN|ZDB-GENE-050522-292 - symbol:zgc:111991 "zgc:111991"... 289 2.0e-30 2
WB|WBGene00019825 - symbol:R02D3.8 species:6239 "Caenorha... 332 4.9e-30 1
UNIPROTKB|E1BVJ4 - symbol:ERI2 "Uncharacterized protein" ... 322 5.6e-29 1
DICTYBASE|DDB_G0283113 - symbol:eriA "RNA exonuclease" sp... 321 7.1e-29 1
ZFIN|ZDB-GENE-050522-39 - symbol:eri1 "exoribonuclease 1"... 317 1.9e-28 1
UNIPROTKB|Q8IV48 - symbol:ERI1 "3'-5' exoribonuclease 1" ... 304 4.5e-27 1
UNIPROTKB|I3LQQ1 - symbol:ERI1 "Uncharacterized protein" ... 299 1.5e-26 1
UNIPROTKB|Q5ZL01 - symbol:ERI1 "Uncharacterized protein" ... 296 3.2e-26 1
UNIPROTKB|Q32LA2 - symbol:THEX1 "Uncharacterized protein"... 295 4.0e-26 1
UNIPROTKB|E2QU14 - symbol:ERI1 "Uncharacterized protein" ... 295 4.0e-26 1
MGI|MGI:1914526 - symbol:Eri1 "exoribonuclease 1" species... 293 6.6e-26 1
RGD|1308378 - symbol:Eri1 "exoribonuclease 1" species:101... 287 2.9e-25 1
UNIPROTKB|H0Y4B0 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 223 1.5e-24 2
UNIPROTKB|G3MZQ7 - symbol:ERI1 "Uncharacterized protein" ... 272 1.1e-23 1
WB|WBGene00001332 - symbol:eri-1 species:6239 "Caenorhabd... 268 1.9e-22 1
UNIPROTKB|F1ML00 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 254 9.0e-22 1
UNIPROTKB|B4DEX5 - symbol:ERI3 "Prion protein interacting... 254 9.0e-22 1
RGD|1595859 - symbol:Eri3 "ERI1 exoribonuclease family me... 246 6.3e-21 1
UNIPROTKB|F1NBT2 - symbol:F1NBT2 "Uncharacterized protein... 241 2.1e-20 1
UNIPROTKB|F6UGJ8 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 241 2.1e-20 1
UNIPROTKB|F1S331 - symbol:ERI3 "Uncharacterized protein" ... 241 2.1e-20 1
UNIPROTKB|F6QUN3 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 238 4.4e-20 1
WB|WBGene00000797 - symbol:crn-4 species:6239 "Caenorhabd... 227 6.5e-19 1
UNIPROTKB|H3BN77 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 203 2.3e-16 1
POMBASE|SPBC30B4.08 - symbol:eri1 "double-strand siRNA ri... 147 4.4e-14 2
UNIPROTKB|Q81K63 - symbol:kapD "Sporulation inhibitor Kap... 175 2.1e-13 1
TIGR_CMR|BA_5142 - symbol:BA_5142 "sporulation inhibitor ... 175 2.1e-13 1
UNIPROTKB|I3L645 - symbol:ERI2 "Uncharacterized protein" ... 171 6.0e-13 1
TAIR|locus:2083636 - symbol:AT3G15140 "AT3G15140" species... 185 8.0e-13 1
UNIPROTKB|Q9KS82 - symbol:VC1377 "Putative uncharacterize... 157 2.8e-11 1
TIGR_CMR|VC_1377 - symbol:VC_1377 "conserved hypothetical... 157 2.8e-11 1
TIGR_CMR|BA_3593 - symbol:BA_3593 "exonuclease family pro... 112 0.00042 1
UNIPROTKB|G4MV21 - symbol:MGG_07327 "Asparagine-rich prot... 114 0.00067 2
>UNIPROTKB|A8K979 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 OrthoDB:EOG4F1X2H EMBL:AK127391
EMBL:AK292594 EMBL:BC010503 EMBL:AB040937 IPI:IPI00027086
IPI:IPI00444503 IPI:IPI00555642 IPI:IPI00872685
RefSeq:NP_001136197.1 RefSeq:NP_542394.2 UniGene:Hs.248437
ProteinModelPortal:A8K979 SMR:A8K979 STRING:A8K979
PhosphoSite:A8K979 PRIDE:A8K979 DNASU:112479
Ensembl:ENST00000300005 Ensembl:ENST00000357967
Ensembl:ENST00000389345 Ensembl:ENST00000563117
Ensembl:ENST00000564349 Ensembl:ENST00000569729 GeneID:112479
KEGG:hsa:112479 UCSC:uc002dhs.3 UCSC:uc002dht.3 UCSC:uc002dhu.1
CTD:112479 GeneCards:GC16M020791 HGNC:HGNC:30541 HPA:HPA035384
neXtProt:NX_A8K979 PharmGKB:PA164719245 HOGENOM:HOG000112417
HOVERGEN:HBG097018 InParanoid:A8K979 OMA:PFLLPSW GenomeRNAi:112479
NextBio:78594 Bgee:A8K979 CleanEx:HS_ERI2 Genevestigator:A8K979
Uniprot:A8K979
Length = 691
Score = 310 (114.2 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 74/189 (39%), Positives = 102/189 (53%)
Query: 20 HPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA 79
H QEIIEFP +I + FQ YV+P P+L++FC ELTGI+Q QVD G+ L
Sbjct: 54 HSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFCMELTGIKQAQVDEGVPLKIC 113
Query: 80 LYFHDKWL--LQM--------GLNNTNFS------VVTWSDWDCQVMLESECRIKKIQKP 123
L KW+ +Q G++ + S VTWSDWD V LE EC+ K++ KP
Sbjct: 114 LSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKP 173
Query: 124 AYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRG 183
+ N WI+LR + + L A++ G+ + GR H GLDD+ N A L ++R G
Sbjct: 174 VFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDG 233
Query: 184 FKFSITKSL 192
IT+SL
Sbjct: 234 CVMKITRSL 242
Score = 203 (76.5 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 1 FEYYVVIDFEATCDKE-RNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP +I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWL 87
ELTGI+Q QVD G+ L L KW+
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWI 121
Score = 104 (41.7 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 642
>UNIPROTKB|F1P8R6 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OMA:ALDCLPM EMBL:AAEX03004472 Ensembl:ENSCAFT00000028477
Uniprot:F1P8R6
Length = 658
Score = 299 (110.3 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 72/187 (38%), Positives = 103/187 (55%)
Query: 22 QEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY 81
QEI+EFP EI + F YV+P P+L++FC ELTGI+Q QVD G+ L L
Sbjct: 56 QEIVEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSEFCMELTGIKQAQVDEGVPLRICLS 115
Query: 82 FHDKWLLQM----------GLNN-TNFSV-----VTWSDWDCQVMLESECRIKKIQKPAY 125
KW+ ++ G+++ +N V VTWSDWD V LE EC+ K++ KP +
Sbjct: 116 QFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVF 175
Query: 126 FNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
N WI+LRV + + L A++ G+ + G+ H GLDD+ N A L ++R G
Sbjct: 176 LNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGQEHSGLDDSRNTAMLAWKMIRDGCL 235
Query: 186 FSITKSL 192
IT+SL
Sbjct: 236 MKITRSL 242
Score = 194 (73.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 40/88 (45%), Positives = 53/88 (60%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + H QEI+EFP EI + F YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHQSQEIVEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWL 87
ELTGI+Q QVD G+ L L KW+
Sbjct: 94 MELTGIKQAQVDEGVPLRICLSQFCKWI 121
Score = 102 (41.0 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATTS 277
C CG +S + V+ GP G F+ C G + NR CC YF+W S
Sbjct: 585 CKCGRRSKRLVVTNNGPNHGKVFYCCPVGKYQENR-KCCGYFKWEQAS 631
>MGI|MGI:1918401 [details] [associations]
symbol:Eri2 "exoribonuclease 2" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918401 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 GeneTree:ENSGT00530000063205
HSSP:Q8IV48 CTD:112479 HOVERGEN:HBG097018 EMBL:AK029056
EMBL:AK135821 EMBL:AK160698 EMBL:AK165163 EMBL:BC090961
IPI:IPI00404329 RefSeq:NP_081974.3 UniGene:Mm.274160
ProteinModelPortal:Q5BKS4 SMR:Q5BKS4 PhosphoSite:Q5BKS4
PRIDE:Q5BKS4 Ensembl:ENSMUST00000150844 GeneID:71151 KEGG:mmu:71151
UCSC:uc009jlu.2 InParanoid:Q5BKS4 NextBio:333139 Bgee:Q5BKS4
Genevestigator:Q5BKS4 Uniprot:Q5BKS4
Length = 688
Score = 302 (111.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 78/210 (37%), Positives = 107/210 (50%)
Query: 14 DKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNG 73
D + + P EIIEFP EI + F YV+P P+L++FC ELTGI+Q QVD G
Sbjct: 49 DGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEG 107
Query: 74 ITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTWSDWDCQVMLESECRI 117
+ L L KW+ ++ T +F+ VTWSDWD V LE ECR
Sbjct: 108 VPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRR 167
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K++ KP + N WI+LR + + L A++ G+ + GR H GLDD+ N A L
Sbjct: 168 KQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAW 227
Query: 178 VIMRRGFKFSITKSLTP---QANPNCLTWN 204
++R G IT+SL + NP L N
Sbjct: 228 KMIRDGCLMKITRSLNKVLTKKNPKILARN 257
Score = 184 (69.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 39/96 (40%), Positives = 54/96 (56%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
+ Y +V+DFE+TC + H EIIEFP EI + F YV+P P+L++FC
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT 95
ELTGI+Q QVD G+ L L KW+ ++ T
Sbjct: 94 TELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQT 129
Score = 97 (39.2 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + +R CC YF+W T
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDR-KCCGYFKWEQT 639
>UNIPROTKB|E1BJE4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 Pfam:PF00929 GO:GO:0008270
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02057647 IPI:IPI00687052
ProteinModelPortal:E1BJE4 Ensembl:ENSBTAT00000008456 OMA:ALDCLPM
Uniprot:E1BJE4
Length = 689
Score = 297 (109.6 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 77/210 (36%), Positives = 107/210 (50%)
Query: 14 DKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNG 73
D +R+ QE++EFP EI + F YV+P P+L++FC ELTGI+Q QVD G
Sbjct: 49 DGKRH-RSQEVVEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFCVELTGIKQAQVDEG 107
Query: 74 ITLGEALYFHDKWLLQMGLNN-----TNFS-----------VVTWSDWDCQVMLESECRI 117
+ L L KW+ ++ T S VTWSDWD V LE EC+
Sbjct: 108 VPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVTWSDWDLGVCLEYECKR 167
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K++ KP + N WI+LRV + + L A++ G+ + GR H GLDD+ N A L
Sbjct: 168 KQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGREHFGLDDSRNTALLAW 227
Query: 178 VIMRRGFKFSITKSLTPQAN---PNCLTWN 204
++R G IT+SL + PN T N
Sbjct: 228 KMIRDGCLMKITRSLNKVSTKRIPNIFTRN 257
Score = 195 (73.7 bits), Expect = 8.1e-21, Sum P(2) = 8.1e-21
Identities = 41/105 (39%), Positives = 58/105 (55%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
F+Y ++IDFE+TC + H QE++EFP EI + F YV+P P+L++FC
Sbjct: 34 FDYLIIIDFESTCWNDGKRHRSQEVVEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSD 104
ELTGI+Q QVD G+ L L KW+ ++ T SD
Sbjct: 94 VELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSD 138
Score = 94 (38.1 bits), Expect = 9.2e-33, Sum P(2) = 9.2e-33
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + + GP G F+ C G + R CC YF+W T
Sbjct: 595 CKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKR-KCCGYFKWEQT 640
>UNIPROTKB|A6QLH5 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 EMBL:BC147967 IPI:IPI00692999
RefSeq:NP_001106713.1 UniGene:Bt.5101 ProteinModelPortal:A6QLH5
Ensembl:ENSBTAT00000020671 GeneID:540516 KEGG:bta:540516 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 InParanoid:A6QLH5
OMA:FPALTEH OrthoDB:EOG4ZKJMJ NextBio:20878677 ArrayExpress:A6QLH5
Uniprot:A6QLH5
Length = 337
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 83/195 (42%), Positives = 111/195 (56%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL-AGLIWQ--GRVHCGLDDAINIAR 174
+ YF QWINL+ +S G C K + ++ GL Q GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQT 333
>UNIPROTKB|O43414 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 EMBL:AL035417 CTD:79033 HOVERGEN:HBG108293
OrthoDB:EOG4ZKJMJ EMBL:AF007157 EMBL:AK290567 EMBL:AL390776
EMBL:AC004254 EMBL:BC001072 EMBL:BC004456 IPI:IPI00020701
IPI:IPI00644349 IPI:IPI00888358 RefSeq:NP_076971.1
UniGene:Hs.731413 PDB:2XRI PDBsum:2XRI ProteinModelPortal:O43414
SMR:O43414 STRING:O43414 PhosphoSite:O43414 PaxDb:O43414
PRIDE:O43414 DNASU:79033 Ensembl:ENST00000372257
Ensembl:ENST00000372259 GeneID:79033 KEGG:hsa:79033 UCSC:uc001clt.3
GeneCards:GC01M044686 HGNC:HGNC:17276 HPA:HPA027147 MIM:609917
neXtProt:NX_O43414 PharmGKB:PA164719272 EvolutionaryTrace:O43414
GenomeRNAi:79033 NextBio:67747 ArrayExpress:O43414 Bgee:O43414
CleanEx:HS_ERI3 Genevestigator:O43414 Uniprot:O43414
Length = 337
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 83/195 (42%), Positives = 111/195 (56%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL-AGLIWQ--GRVHCGLDDAINIAR 174
+ YF QWINL+ +S G C K + ++ GL Q GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQT 333
>MGI|MGI:2153887 [details] [associations]
symbol:Eri3 "exoribonuclease 3" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2153887
GO:GO:0005886 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HSSP:Q8IV48 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 OMA:FPALTEH
OrthoDB:EOG4ZKJMJ EMBL:AK083017 EMBL:AK144107 EMBL:AL645740
EMBL:AL671520 EMBL:BC079640 EMBL:BC116685 EMBL:BC117540
EMBL:AY029599 IPI:IPI00225264 IPI:IPI00471104 IPI:IPI00649884
RefSeq:NP_536717.2 UniGene:Mm.235891 ProteinModelPortal:Q8C460
SMR:Q8C460 STRING:Q8C460 PhosphoSite:Q8C460 PaxDb:Q8C460
PRIDE:Q8C460 DNASU:140546 Ensembl:ENSMUST00000037127
Ensembl:ENSMUST00000125312 Ensembl:ENSMUST00000144373 GeneID:140546
KEGG:mmu:140546 UCSC:uc008uis.1 UCSC:uc008uit.1 InParanoid:Q8C460
ChiTaRS:ERI3 NextBio:369851 Bgee:Q8C460 CleanEx:MM_PRNPIP1
Genevestigator:Q8C460 Uniprot:Q8C460
Length = 337
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 83/195 (42%), Positives = 110/195 (56%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +VML +C
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL-AGLIWQ--GRVHCGLDDAINIAR 174
+ YF QWINL+ +S G C K + ++ GL Q GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQT 333
>UNIPROTKB|E2RAN5 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:79033 OMA:FPALTEH
EMBL:AAEX03009798 EMBL:AAEX03009797 RefSeq:XP_850849.2
Ensembl:ENSCAFT00000007745 GeneID:475384 KEGG:cfa:475384
Uniprot:E2RAN5
Length = 337
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 82/195 (42%), Positives = 111/195 (56%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL-AGLIWQ--GRVHCGLDDAINIAR 174
+ YF QWINL+ +S G C K + ++ GL Q GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSIT 189
++ + +GF F T
Sbjct: 319 IMKTLAYQGFIFKQT 333
>RGD|1583889 [details] [associations]
symbol:Eri2 "ERI1 exoribonuclease family member 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
RGD:1583889 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OrthoDB:EOG4F1X2H CTD:112479 OMA:ALDCLPM IPI:IPI00958369
RefSeq:NP_001178043.1 UniGene:Rn.198513 ProteinModelPortal:D4A625
Ensembl:ENSRNOT00000019747 GeneID:691484 KEGG:rno:691484
UCSC:RGD:1583889 NextBio:743149 Uniprot:D4A625
Length = 687
Score = 296 (109.3 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 76/210 (36%), Positives = 106/210 (50%)
Query: 14 DKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNG 73
D + + P EIIEFP EI + F YV+P P+L++FC ELTGI+Q QVD G
Sbjct: 49 DGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQVQVDEG 107
Query: 74 ITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTWSDWDCQVMLESECRI 117
+ L L KW+ ++ +F+ VTWSDWD V LE EC+
Sbjct: 108 VPLKICLSQFCKWIHKLQQQKKISFATGDSEPSTPEVKPCAFVTWSDWDLGVCLEYECKR 167
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K++ KP + N WI+LR + + L A++ G+ + GR H GLDD+ N A L
Sbjct: 168 KQLLKPVFLNSWIDLRATYKLFYNRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAW 227
Query: 178 VIMRRGFKFSITKSLTP---QANPNCLTWN 204
++R G IT+SL + NP L N
Sbjct: 228 KMIRDGCLMKITRSLNKVLTKKNPKILARN 257
Score = 186 (70.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
++Y +V+DFE+TC + H EIIEFP EI + F YV+P P+L++FC
Sbjct: 34 YDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWL 87
ELTGI+Q QVD G+ L L KW+
Sbjct: 94 TELTGIKQVQVDEGVPLKICLSQFCKWI 121
Score = 86 (35.3 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + ++ +C +YF+W T
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQEDKKSC-SYFKWEQT 639
>WB|WBGene00019724 [details] [associations]
symbol:M02B7.2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353 EMBL:FO081251
PIR:T29900 RefSeq:NP_500418.1 ProteinModelPortal:Q94285 SMR:Q94285
STRING:Q94285 PaxDb:Q94285 EnsemblMetazoa:M02B7.2 GeneID:187397
KEGG:cel:CELE_M02B7.2 UCSC:M02B7.2 CTD:187397 WormBase:M02B7.2
InParanoid:Q94285 OMA:CTWINIK NextBio:935118 Uniprot:Q94285
Length = 266
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 78/195 (40%), Positives = 105/195 (53%)
Query: 1 FEYYVVIDFEATC-DKERN-LHP-QEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC D + +HP QEIIEFP I F Y++PT P LT
Sbjct: 58 FDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYIKPTEFPRLTS 117
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LT I Q VD L E L D WL + L NF+ VT DWD +V L SE +
Sbjct: 118 FCTSLTRIIQEMVDEKPKLPEVLSEFDSWLKEDSRLKQGNFAFVTCGDWDLKVALPSEAK 177
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I+ P YFNQWIN++ +++ + + + + L QGR+H G+DD NI ++
Sbjct: 178 FKNIEIPEYFNQWINVKKAYAEHTNHFAKGMTQLLAIYKLQHQGRLHSGIDDVANICEIV 237
Query: 177 SVIMRRGFKFSITKS 191
+ R G + IT S
Sbjct: 238 RCLGRDGHNYRITGS 252
>ZFIN|ZDB-GENE-050522-292 [details] [associations]
symbol:zgc:111991 "zgc:111991" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-050522-292 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BC095637 IPI:IPI00607271 RefSeq:NP_001018476.1
UniGene:Dr.89386 HSSP:Q8IV48 ProteinModelPortal:Q502M8 PRIDE:Q502M8
GeneID:553667 KEGG:dre:553667 eggNOG:NOG304111 InParanoid:Q502M8
OrthoDB:EOG4F1X2H NextBio:20880400 Uniprot:Q502M8
Length = 555
Score = 289 (106.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 74/204 (36%), Positives = 106/204 (51%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
F + ++IDFE+TC +E++ QEIIEFP + + F +YV+P P+L+ FC
Sbjct: 32 FSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCT 91
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL--LQ-----MGLNNTNFSV--------VTWSDW 105
ELTGI Q QVD+ L L +WL LQ + L +++ + VTWSDW
Sbjct: 92 ELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDW 151
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D V L EC+ K++ P WI+LR + + L+ A+ G+ + GR H G
Sbjct: 152 DLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSG 211
Query: 166 LDDAINIARLLSVIMRRGFKFSIT 189
L DA N A L +M G + SIT
Sbjct: 212 LVDARNTALLAQRMMTDGCQLSIT 235
Score = 75 (31.5 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 23/97 (23%), Positives = 39/97 (40%)
Query: 181 RRGFKFSITKSLTP--QANP-NCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGAK 237
RR S+ K+ P ++ P + LT + P +++ H C CG +
Sbjct: 434 RRCVSSSVFKTPPPLLRSGPLSPLTHSLGRIAAPLSVHAHTHALKQKVKVTSPLCVCGRR 493
Query: 238 SIKKVIQRPGPKRGSFFFGCGNWTPNRGA-CCNYFQW 273
+ + + GP G F+ C N C++FQW
Sbjct: 494 ARRLTVGNGGPNHGRVFYCCPRRRSNTHTHTCDFFQW 530
>WB|WBGene00019825 [details] [associations]
symbol:R02D3.8 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO081663
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353
OMA:PYFMEWI PIR:T15066 PIR:T28707 RefSeq:NP_499887.1
ProteinModelPortal:Q9TZZ9 SMR:Q9TZZ9 STRING:Q9TZZ9
EnsemblMetazoa:R02D3.8 GeneID:176845 KEGG:cel:CELE_R02D3.8
UCSC:R02D3.8 CTD:176845 WormBase:R02D3.8 InParanoid:Q9TZZ9
NextBio:894262 Uniprot:Q9TZZ9
Length = 266
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 77/195 (39%), Positives = 102/195 (52%)
Query: 1 FEYYVVIDFEATC-DKERN-LHP-QEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC D + +HP QEIIEFP I F YV+PT P LT
Sbjct: 58 FDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPTECPRLTS 117
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL + L D WL + L F+ VT DWD +V L +E +
Sbjct: 118 FCTSLTGIIQEMVDEKPTLPQVLSEFDSWLKEDSRLEKGKFAFVTCGDWDLKVALPNEAK 177
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I P YFNQWIN++ ++ + + + + L QGR H G+DD NI ++
Sbjct: 178 FKNIGIPEYFNQWINVKKASAEHTNHFAKGIAQLLAIYKLQHQGRHHSGIDDVANICEIV 237
Query: 177 SVIMRRGFKFSITKS 191
+ G + IT S
Sbjct: 238 RCLGMNGHNYQITGS 252
>UNIPROTKB|E1BVJ4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:PFLLPSW
EMBL:AADN02064630 IPI:IPI00578773 ProteinModelPortal:E1BVJ4
Ensembl:ENSGALT00000003470 Uniprot:E1BVJ4
Length = 241
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 76/208 (36%), Positives = 111/208 (53%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
F++ +V+DFE+TC ++ EIIEFP I A F T+V+P +P+L++FC
Sbjct: 32 FDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQEQPVLSEFCT 91
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMG-----LNNTNF-----------SVVTWSD 104
LTG+ Q QVD G+ L L KWL ++ L +++ + VTW+D
Sbjct: 92 TLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCTFVTWTD 151
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V L EC+ K++ KP FN WI+L+ + + L A++ GL + GR H
Sbjct: 152 WDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPKGLSGALQYVGLAFVGREHS 211
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N ARL ++ G ITKSL
Sbjct: 212 GLDDSRNTARLAWRLICDGCVLKITKSL 239
>DICTYBASE|DDB_G0283113 [details] [associations]
symbol:eriA "RNA exonuclease" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0283113
Pfam:PF00929 GenomeReviews:CM000153_GR GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AAFI02000050
eggNOG:COG5018 RefSeq:XP_639244.1 ProteinModelPortal:Q54RJ2
EnsemblProtists:DDB0231961 GeneID:8623930 KEGG:ddi:DDB_G0283113
InParanoid:Q54RJ2 OMA:KRHEMEI ProtClustDB:CLSZ2728980
Uniprot:Q54RJ2
Length = 220
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 61/196 (31%), Positives = 103/196 (52%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
F+Y +V+DFEATC+K+ QEIIEFP E ++ F+ YV+P P L+ FC
Sbjct: 21 FKYLIVLDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREYVKPIINPNLSKFCT 80
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL---LQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
ELTGI+Q V+N + L H W L + + + V DWD L + ++
Sbjct: 81 ELTGIKQETVENAALFPDVLKSHCDWFFESLPKDIQSDEYCFVCCGDWDLLQCLPKQLKL 140
Query: 118 -KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ KP+Y ++WIN++ ++ + + + + +GR HCGL D++NI+++L
Sbjct: 141 CNNLSKPSYLSKWINIKKQYTLFYNRPSFGMTNMLRELNIPLEGRHHCGLSDSLNISKIL 200
Query: 177 SVIMRRGFKFSITKSL 192
++ G F + ++
Sbjct: 201 KRMIEEGCNFDLVSTM 216
>ZFIN|ZDB-GENE-050522-39 [details] [associations]
symbol:eri1 "exoribonuclease 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 SMART:SM00479 SMART:SM00513
Pfam:PF00929 ZFIN:ZDB-GENE-050522-39 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOGENOM:HOG000006635
HOVERGEN:HBG048925 EMBL:BX511222 EMBL:BC095343 IPI:IPI00631298
RefSeq:NP_001018450.1 UniGene:Dr.15106 SMR:Q503G0
Ensembl:ENSDART00000065671 GeneID:553641 KEGG:dre:553641
InParanoid:Q503G0 NextBio:20880375 Uniprot:Q503G0
Length = 337
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 71/199 (35%), Positives = 105/199 (52%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLT 56
F+Y V+DFEATC+ E N LH EIIEFP EI+ FQ YV+P P L+
Sbjct: 115 FDYICVVDFEATCE-ENNPPDYLH--EIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLS 171
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC +LTGI Q VD T + L WL + L + +T WD L ++C
Sbjct: 172 EFCVKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQC 231
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEA--VELAGLIWQGRVHCGLDDAINIA 173
++ +I+ P + +WIN+R + + R K +E G+ + GR HCGLDD+ NIA
Sbjct: 232 KLSRIRYPQFARKWINIRKSYGNFYKVPRTQTKLICMLENLGMEYDGRPHCGLDDSRNIA 291
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + + + L
Sbjct: 292 RIAIHMLKDGCQLRVNECL 310
>UNIPROTKB|Q8IV48 [details] [associations]
symbol:ERI1 "3'-5' exoribonuclease 1" species:9606 "Homo
sapiens" [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0031125 "rRNA 3'-end processing"
evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337
Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513
Pfam:PF00929 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
DrugBank:DB00131 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 EMBL:AY310909 EMBL:AK291062 EMBL:AL137679
EMBL:BC035279 IPI:IPI00216873 PIR:T46432 RefSeq:NP_699163.2
UniGene:Hs.20000 PDB:1W0H PDB:1ZBH PDB:1ZBU PDBsum:1W0H PDBsum:1ZBH
PDBsum:1ZBU ProteinModelPortal:Q8IV48 SMR:Q8IV48 STRING:Q8IV48
PhosphoSite:Q8IV48 DMDM:45476938 PaxDb:Q8IV48 PeptideAtlas:Q8IV48
PRIDE:Q8IV48 DNASU:90459 Ensembl:ENST00000250263
Ensembl:ENST00000519292 Ensembl:ENST00000523898 GeneID:90459
KEGG:hsa:90459 UCSC:uc003wsk.2 CTD:90459 GeneCards:GC08P008900
HGNC:HGNC:23994 HPA:CAB033838 MIM:608739 neXtProt:NX_Q8IV48
PharmGKB:PA164719226 HOGENOM:HOG000006635 HOVERGEN:HBG048925
InParanoid:Q8IV48 OMA:ICVIDFE OrthoDB:EOG4NGGN1 PhylomeDB:Q8IV48
EvolutionaryTrace:Q8IV48 GenomeRNAi:90459 NextBio:76770
ArrayExpress:Q8IV48 Bgee:Q8IV48 CleanEx:HS_ERI1
Genevestigator:Q8IV48 GermOnline:ENSG00000104626 GO:GO:0071204
GO:GO:0071207 Uniprot:Q8IV48
Length = 349
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 71/199 (35%), Positives = 105/199 (52%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC+ E N P+ EIIEFP EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATCE-EGN-PPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELG-TKYKYSLLTDGSWDMSKFLNIQC 243
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIA
Sbjct: 244 QLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIA 303
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 304 RIAVRMLQDGCELRINEKM 322
>UNIPROTKB|I3LQQ1 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 Ensembl:ENSSSCT00000031051 Uniprot:I3LQQ1
Length = 313
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 70/199 (35%), Positives = 104/199 (52%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC+ E N P+ EIIEFP EI FQ YVRP L+D
Sbjct: 91 YDYICIIDFEATCE-EGN-PPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 148
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 149 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELG-TKYKYSILTDGSWDMSKFLNIQC 207
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 208 RLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 267
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + + + +
Sbjct: 268 RIAVRMLQDGCELRVNEKM 286
>UNIPROTKB|Q5ZL01 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 Gene3D:1.10.720.30
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408
KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205
CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:AADN02009127
EMBL:AJ719933 IPI:IPI00571536 RefSeq:NP_001006450.1
UniGene:Gga.2609 SMR:Q5ZL01 Ensembl:ENSGALT00000018669
GeneID:422629 KEGG:gga:422629 InParanoid:Q5ZL01 NextBio:20825234
Uniprot:Q5ZL01
Length = 327
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 68/198 (34%), Positives = 104/198 (52%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC+ E N P+ EIIEFP EI FQ YV+P P L++
Sbjct: 105 YDYICVVDFEATCE-EGN-PPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINPKLSE 162
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L W+ Q L ++ ++T WD L +CR
Sbjct: 163 FCVGLTGITQDIVDKADTFPQVLQNVVDWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCR 222
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +I+ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 223 VSRIKHPSFAKKWINIRKSYGNFYKVPRNQTKLMIMLEKLGMSYDGRPHSGLDDSKNIAR 282
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 283 IAIRMLQDGCQLRVNEKM 300
>UNIPROTKB|Q32LA2 [details] [associations]
symbol:THEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOVERGEN:HBG048925
OMA:ICVIDFE EMBL:DAAA02060421 EMBL:BC109681 IPI:IPI00692488
RefSeq:NP_001033281.1 UniGene:Bt.22450 SMR:Q32LA2
Ensembl:ENSBTAT00000012775 GeneID:540728 KEGG:bta:540728
InParanoid:Q32LA2 NextBio:20878798 Uniprot:Q32LA2
Length = 349
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 69/199 (34%), Positives = 104/199 (52%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC+ E N P+ EIIEFP EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATCE-EGN-PPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELG-TKYKYSILTDGSWDMSKFLNIQC 243
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 244 QLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 303
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + + + +
Sbjct: 304 RIAVRMLQDGCELRVNEKM 322
>UNIPROTKB|E2QU14 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 CTD:90459 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 EMBL:AAEX03010431 RefSeq:XP_539997.2
Ensembl:ENSCAFT00000010754 GeneID:482882 KEGG:cfa:482882
NextBio:20857381 Uniprot:E2QU14
Length = 349
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 70/199 (35%), Positives = 103/199 (51%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC+ E N P+ EIIEFP EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATCE-EGN-PPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G + ++T WD L +C
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELG-TKYKYCILTDGSWDMSKFLNIQC 243
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 244 RLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 303
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 304 RIAVRMLQDGCELRINEKM 322
>MGI|MGI:1914526 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IDA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=IDA] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IDA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 MGI:MGI:1914526 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175
GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OrthoDB:EOG4NGGN1
GO:GO:0071204 GO:GO:0071207 EMBL:AK014041 EMBL:AK014410
EMBL:AK050230 EMBL:AK165026 EMBL:AK172005 EMBL:BC046412
IPI:IPI00330329 RefSeq:NP_080343.4 UniGene:Mm.207534
ProteinModelPortal:Q7TMF2 SMR:Q7TMF2 STRING:Q7TMF2
PhosphoSite:Q7TMF2 PRIDE:Q7TMF2 Ensembl:ENSMUST00000033927
GeneID:67276 KEGG:mmu:67276 UCSC:uc009lky.2 InParanoid:Q3TNT0
NextBio:324080 Bgee:Q7TMF2 CleanEx:MM_THEX1 Genevestigator:Q7TMF2
GermOnline:ENSMUSG00000031527 Uniprot:Q7TMF2
Length = 345
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 69/199 (34%), Positives = 102/199 (51%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ PA+ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 RLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 300 RIAVRMLQDGCELRINEKI 318
>RGD|1308378 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO;ISS]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA
3'-end processing" evidence=ISO;ISS] [GO:0043022 "ribosome binding"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISO;ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISO;ISS] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828
IPI:IPI00364660 RefSeq:NP_001014165.1 UniGene:Rn.17469
ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:Q5FVR4 PRIDE:Q5FVR4
Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159
UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391
Genevestigator:Q5FVR4 GermOnline:ENSRNOG00000011448 Uniprot:Q5FVR4
Length = 345
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 68/199 (34%), Positives = 102/199 (51%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ +++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 QLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + L
Sbjct: 300 RIAVRMLQDGCELRINEKL 318
>UNIPROTKB|H0Y4B0 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
EMBL:AL390776 HGNC:HGNC:17276 ProteinModelPortal:H0Y4B0 SMR:H0Y4B0
PRIDE:H0Y4B0 Ensembl:ENST00000456170 Bgee:H0Y4B0 Uniprot:H0Y4B0
Length = 204
Score = 223 (83.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 50/114 (43%), Positives = 64/114 (56%)
Query: 22 QEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY 81
QEIIEFP EI + F YV+P P LT FC ELTGI Q VD +L + L
Sbjct: 2 QEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 61
Query: 82 FHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLR 133
D+W+ + GL + N S+ VT DWD +VML +C+ + YF QWINL+
Sbjct: 62 RVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLK 115
Score = 72 (30.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 160 GRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
GR H G+DD NIA ++ + RGF F T
Sbjct: 171 GRPHSGIDDCKNIANIMKTLAYRGFIFKQT 200
Score = 45 (20.9 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPN 263
CY ++ +K PG K SF GC W N
Sbjct: 128 CYQSEEAQRKE-NTPGVKAYSFAMGC--WPKN 156
>UNIPROTKB|G3MZQ7 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02070439
Ensembl:ENSBTAT00000064195 OMA:PQLSKFC Uniprot:G3MZQ7
Length = 349
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 64/199 (32%), Positives = 103/199 (51%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC+ E N P+ EIIEF EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATCE-EGN-PPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELG-TKYKYSILTDGSWDMSKFLNIQC 243
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ +++ P + +WI+++ + + R +K + E G+ + G H GLDD+ N+A
Sbjct: 244 QLSRLKYPPFAKKWISIQKSYGNFYKVPRSQIKLTIMLEKLGMDYDGWPHSGLDDSKNVA 303
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + + + +
Sbjct: 304 RIAVRMLQDGCELRVNEKM 322
>WB|WBGene00001332 [details] [associations]
symbol:eri-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0048609 "multicellular organismal
reproductive process" evidence=IMP] [GO:0006401 "RNA catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP;IDA]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP;IDA] [GO:0007281 "germ cell development"
evidence=IGI;IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0005737 GO:GO:0008406
GO:GO:0002119 GO:GO:0016246 GO:GO:0003676 GO:GO:0003723
GO:GO:0006401 GO:GO:0009790 GO:GO:0048609 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0045132 GO:GO:0000175 eggNOG:COG5018
GeneTree:ENSGT00530000063205 GO:GO:0000467 EMBL:FO081716 PIR:T32575
PIR:T32576 RefSeq:NP_741292.1 RefSeq:NP_741293.1
ProteinModelPortal:O44406 SMR:O44406 IntAct:O44406 STRING:O44406
PaxDb:O44406 PRIDE:O44406 EnsemblMetazoa:T07A9.5b GeneID:176868
KEGG:cel:CELE_T07A9.5 UCSC:T07A9.5b CTD:176868 WormBase:T07A9.5a
WormBase:T07A9.5b HOGENOM:HOG000020044 InParanoid:O44406
OMA:LIDVREM NextBio:894366 Uniprot:O44406
Length = 582
Score = 268 (99.4 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 65/204 (31%), Positives = 101/204 (49%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + IDFE TC + +P EIIE P +II+ F+TYVRP P L++FC
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCM 207
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL--LQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+ T I Q VD EAL W+ +G N+ F+ VT D ++ +C +
Sbjct: 208 QFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLS 267
Query: 119 KIQKPAYFNQWINLRVPFSKVF-----GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I+ P F +IN++ F + F G+ + ++ +E L + G H GLDDA NIA
Sbjct: 268 NIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIA 327
Query: 174 RLLSVIMRRGFKFSITKSLTPQAN 197
+ +M+ + I + + + N
Sbjct: 328 AIAIQMMKLKIELRINQKCSYKEN 351
>UNIPROTKB|F1ML00 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 UniGene:Bt.5101 EMBL:DAAA02009029
EMBL:DAAA02009030 IPI:IPI00903627 ProteinModelPortal:F1ML00
SMR:F1ML00 Ensembl:ENSBTAT00000034295 ArrayExpress:F1ML00
Uniprot:F1ML00
Length = 160
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 64/158 (40%), Positives = 86/158 (54%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 -SV-VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL- 153
S+ VT DWD +VML +C+ + YF QWINL+ +S G C K + ++
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 154 AGLIWQ--GRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
GL Q GR H G+DD NIA ++ + RGF F T
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQT 156
>UNIPROTKB|B4DEX5 [details] [associations]
symbol:ERI3 "Prion protein interacting protein, isoform
CRA_d" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
EMBL:CH471059 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
HOGENOM:HOG000218353 EMBL:AL390776 IPI:IPI00644349
UniGene:Hs.731413 HGNC:HGNC:17276 EMBL:AK293833 SMR:B4DEX5
STRING:B4DEX5 Ensembl:ENST00000537474 UCSC:uc010okv.2
HOVERGEN:HBG058704 Uniprot:B4DEX5
Length = 160
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 64/158 (40%), Positives = 86/158 (54%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 -SV-VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-EL- 153
S+ VT DWD +VML +C+ + YF QWINL+ +S G C K + ++
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMG---CWPKNGLLDMN 118
Query: 154 AGLIWQ--GRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
GL Q GR H G+DD NIA ++ + RGF F T
Sbjct: 119 KGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQT 156
>RGD|1595859 [details] [associations]
symbol:Eri3 "ERI1 exoribonuclease family member 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 RGD:1595859
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 OrthoDB:EOG4ZKJMJ IPI:IPI00769247
ProteinModelPortal:D4AA56 Ensembl:ENSRNOT00000026222
UCSC:RGD:1595859 Uniprot:D4AA56
Length = 253
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 53/112 (47%), Positives = 69/112 (61%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVM 110
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +VM
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVM 253
>UNIPROTKB|F1NBT2 [details] [associations]
symbol:F1NBT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:AADN02012702
IPI:IPI00601169 Ensembl:ENSGALT00000016435 OMA:ISXNISK
Uniprot:F1NBT2
Length = 222
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/112 (46%), Positives = 69/112 (61%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 112 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 170
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVM 110
ELTGI Q VD +L + L D+W+ + GL + + S+ VT DWD +VM
Sbjct: 171 ELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVM 222
>UNIPROTKB|F6UGJ8 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI01011710 ProteinModelPortal:F6UGJ8 SMR:F6UGJ8
Ensembl:ENST00000457571 ArrayExpress:F6UGJ8 Bgee:F6UGJ8
Uniprot:F6UGJ8
Length = 250
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/111 (46%), Positives = 68/111 (61%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 141 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 199
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQV 109
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +V
Sbjct: 200 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKV 250
>UNIPROTKB|F1S331 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:FPALTEH
EMBL:CU929772 Ensembl:ENSSSCT00000004352 Uniprot:F1S331
Length = 252
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/111 (46%), Positives = 68/111 (61%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQV 109
ELTGI Q VD +L + L D+W+ + GL + N S+ VT DWD +V
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKV 252
>UNIPROTKB|F6QUN3 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI00943355 ProteinModelPortal:F6QUN3 SMR:F6QUN3
Ensembl:ENST00000452396 ArrayExpress:F6QUN3 Bgee:F6QUN3
Uniprot:F6QUN3
Length = 176
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 53/124 (42%), Positives = 68/124 (54%)
Query: 20 HPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA 79
HP EIIEFP EI + F YV+P P LT FC ELTGI Q VD +L +
Sbjct: 43 HPGEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQV 102
Query: 80 LYFHDKWLLQMGLNNTNF-SV-VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
L D+W+ + GL + N S+ VT DWD +VML +C+ + YF QWINL+ +S
Sbjct: 103 LERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS 162
Query: 138 KVFG 141
G
Sbjct: 163 FAMG 166
>WB|WBGene00000797 [details] [associations]
symbol:crn-4 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0006309 "apoptotic DNA fragmentation"
evidence=IGI;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0000737
"DNA catabolic process, endonucleolytic" evidence=IDA] [GO:0000738
"DNA catabolic process, exonucleolytic" evidence=IDA] [GO:0006401
"RNA catabolic process" evidence=IDA] [GO:0004536
"deoxyribonuclease activity" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005622
GO:GO:0006401 GO:GO:0003697 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006309 GO:GO:0004540 GO:GO:0008408 GO:GO:0004520
EMBL:AY303578 EMBL:FO080097 PIR:T30086 RefSeq:NP_508415.1
UniGene:Cel.11543 PDB:3CG7 PDB:3CM5 PDB:3CM6 PDBsum:3CG7
PDBsum:3CM5 PDBsum:3CM6 ProteinModelPortal:Q10905 SMR:Q10905
STRING:Q10905 PaxDb:Q10905 EnsemblMetazoa:AH9.2 GeneID:180536
KEGG:cel:CELE_AH9.2 UCSC:AH9.2 CTD:180536 WormBase:AH9.2
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000016569
InParanoid:Q10905 OMA:DLWRIAQ EvolutionaryTrace:Q10905
NextBio:909784 GO:GO:0000738 Uniprot:Q10905
Length = 298
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 61/214 (28%), Positives = 95/214 (44%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIA--CFQTYVRPTFEPLLTDF 58
F+ +++DFE T D +P E+I+F +I F YV+P LT
Sbjct: 8 FDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKN 67
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C + TGI Q +D T +WL+ +GL F+ V S D + + + ++
Sbjct: 68 CVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLS 127
Query: 119 KIQKPAYFNQWINLRVPFSKVFG-------DVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
IQ PA+F Q+INL F+ N+ + E L GR H +DD +N
Sbjct: 128 NIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCLN 187
Query: 172 IARLLSVIMRRGFKFSITKSLTPQANPNCLTWNR 205
IA +L ++ G K ++ + LT C +W R
Sbjct: 188 IATILQRMINMGAKVTVNELLTC-----CASWRR 216
>UNIPROTKB|H3BN77 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 EMBL:AC004381
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC002394 HGNC:HGNC:30541
ProteinModelPortal:H3BN77 SMR:H3BN77 Ensembl:ENST00000568805
Bgee:H3BN77 Uniprot:H3BN77
Length = 156
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 1 FEYYVVIDFEATCDKE-RNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP +I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWL 87
ELTGI+Q QVD G+ L L KW+
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWI 121
>POMBASE|SPBC30B4.08 [details] [associations]
symbol:eri1 "double-strand siRNA ribonuclease Eri1"
species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0032296 "double-stranded RNA-specific ribonuclease activity"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060906 "negative regulation of chromatin silencing by small
RNA" evidence=IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 PROSITE:PS50800 SMART:SM00479 Pfam:PF00929
PomBase:SPBC30B4.08 GO:GO:0005829 GO:GO:0046872 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0000175 eggNOG:COG5018
EMBL:AB004539 GO:GO:0000467 RefSeq:XP_001713129.1
ProteinModelPortal:Q08I43 EnsemblFungi:SPBC30B4.08.1 GeneID:2540347
KEGG:spo:SPBC30B4.08 OMA:HETIELP OrthoDB:EOG45MRFR NextBio:20801475
GO:GO:0032296 GO:GO:0060906 Uniprot:Q08I43
Length = 313
Score = 147 (56.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 3 YYVVIDFEATCDKERNLH-PQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKE 61
Y +++D EATC++ EIIE P II F +YVRP+ P L+D+CK
Sbjct: 81 YLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYCKS 140
Query: 62 LTGIQQHQVDNGITLGEAL 80
LTGIQQ VD + L
Sbjct: 141 LTGIQQCTVDKAPIFSDVL 159
Score = 92 (37.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 21/87 (24%), Positives = 43/87 (49%)
Query: 105 WDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
WD L + + K+ P + ++++R + V+ R N+ +E GL ++G H
Sbjct: 205 WDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQFEGSEH 264
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITK 190
G+DDA N++R++ + +F +
Sbjct: 265 RGIDDARNLSRIVKKMCSENVEFECNR 291
>UNIPROTKB|Q81K63 [details] [associations]
symbol:kapD "Sporulation inhibitor KapD" species:1392
"Bacillus anthracis" [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=ISS] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
GO:GO:0030435 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 RefSeq:NP_847328.1 RefSeq:YP_021796.1
RefSeq:YP_031023.1 ProteinModelPortal:Q81K63 DNASU:1084512
EnsemblBacteria:EBBACT00000011210 EnsemblBacteria:EBBACT00000018196
EnsemblBacteria:EBBACT00000023106 GeneID:1084512 GeneID:2814688
GeneID:2847892 KEGG:ban:BA_5142 KEGG:bar:GBAA_5142 KEGG:bat:BAS4780
HOGENOM:HOG000098478 KO:K06348 OMA:FEFTMPE ProtClustDB:PRK07748
BioCyc:BANT260799:GJAJ-4858-MONOMER
BioCyc:BANT261594:GJ7F-5019-MONOMER Uniprot:Q81K63
Length = 207
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + +K L ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFSELV---EK--LAEYEKRCKPTIVTWGNMDMKV-LKHNCEKAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 VDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>TIGR_CMR|BA_5142 [details] [associations]
symbol:BA_5142 "sporulation inhibitor KapD" species:198094
"Bacillus anthracis str. Ames" [GO:0004527 "exonuclease activity"
evidence=ISS] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0030435 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 RefSeq:NP_847328.1
RefSeq:YP_021796.1 RefSeq:YP_031023.1 ProteinModelPortal:Q81K63
DNASU:1084512 EnsemblBacteria:EBBACT00000011210
EnsemblBacteria:EBBACT00000018196 EnsemblBacteria:EBBACT00000023106
GeneID:1084512 GeneID:2814688 GeneID:2847892 KEGG:ban:BA_5142
KEGG:bar:GBAA_5142 KEGG:bat:BAS4780 HOGENOM:HOG000098478 KO:K06348
OMA:FEFTMPE ProtClustDB:PRK07748
BioCyc:BANT260799:GJAJ-4858-MONOMER
BioCyc:BANT261594:GJ7F-5019-MONOMER Uniprot:Q81K63
Length = 207
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + +K L ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFSELV---EK--LAEYEKRCKPTIVTWGNMDMKV-LKHNCEKAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 VDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>UNIPROTKB|I3L645 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:FP016068
Ensembl:ENSSSCT00000025016 OMA:NDGKCHW Uniprot:I3L645
Length = 110
Score = 171 (65.3 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 35/68 (51%), Positives = 44/68 (64%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
F+Y VVIDFE+TC + H QEIIEFP EI + F TYV+P P+L++FC
Sbjct: 34 FDYLVVIDFESTCWNDGKCHWSQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPILSEFC 93
Query: 60 KELTGIQQ 67
ELTGI+Q
Sbjct: 94 MELTGIKQ 101
>TAIR|locus:2083636 [details] [associations]
symbol:AT3G15140 "AT3G15140" species:3702 "Arabidopsis
thaliana" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
HSSP:Q8IV48 HOGENOM:HOG000218353 EMBL:AP001299 EMBL:AF419612
EMBL:AY079112 IPI:IPI00525491 RefSeq:NP_566502.1 UniGene:At.27380
ProteinModelPortal:Q8W566 SMR:Q8W566 EnsemblPlants:AT3G15140.1
GeneID:820745 KEGG:ath:AT3G15140 TAIR:At3g15140 InParanoid:Q8W566
OMA:PYFMEWI PhylomeDB:Q8W566 ProtClustDB:CLSN2688393
Genevestigator:Q8W566 Uniprot:Q8W566
Length = 337
Score = 185 (70.2 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 58/222 (26%), Positives = 95/222 (42%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPT--FEPLLTDF 58
F +++VID E EI+EFP E++ F +VRPT E + +
Sbjct: 126 FNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKY 176
Query: 59 CK----ELTGIQQHQVDNGITLGEALYFHDKWLLQ---------MGLNNTNFSVVTWSDW 105
+ EL G+ + D I + + + WL + GLN+ F VT +W
Sbjct: 177 IEGKYGEL-GVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAF--VTCGNW 233
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D + + +C + I P YF +WINL+ + +G + + G+ G H G
Sbjct: 234 DIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLG 293
Query: 166 LDDAINIARLLSVIMRRG--FKFSITKSLTPQANPNCLTWNR 205
+DD NI R++ ++ G K + +S + N L NR
Sbjct: 294 IDDTKNITRVVQRMLSEGAVLKLTARRSKSNMRNVEFLFKNR 335
>UNIPROTKB|Q9KS82 [details] [associations]
symbol:VC1377 "Putative uncharacterized protein VC1377"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 Pfam:PF00929
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AE004217 PIR:A82207 RefSeq:NP_231021.1
ProteinModelPortal:Q9KS82 DNASU:2614831 GeneID:2614831
KEGG:vch:VC1377 PATRIC:20081824 OMA:DAWNIAA ProtClustDB:CLSK874348
Uniprot:Q9KS82
Length = 176
Score = 157 (60.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 52/175 (29%), Positives = 80/175 (45%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE EI+ Q +V+P + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEISL-FCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E + + G +N ++ +W D ++L +ECR K +
Sbjct: 66 GITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSV 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 171
>TIGR_CMR|VC_1377 [details] [associations]
symbol:VC_1377 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR012337
Pfam:PF00929 GenomeReviews:AE003852_GR GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AE004217 PIR:A82207
RefSeq:NP_231021.1 ProteinModelPortal:Q9KS82 DNASU:2614831
GeneID:2614831 KEGG:vch:VC1377 PATRIC:20081824 OMA:DAWNIAA
ProtClustDB:CLSK874348 Uniprot:Q9KS82
Length = 176
Score = 157 (60.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 52/175 (29%), Positives = 80/175 (45%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE EI+ Q +V+P + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEISL-FCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E + + G +N ++ +W D ++L +ECR K +
Sbjct: 66 GITPRKIEKQGRPLAEVI---QSMVKNFGGSNKIYA--SWGRDD--LILLNECREKGLSV 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 171
>TIGR_CMR|BA_3593 [details] [associations]
symbol:BA_3593 "exonuclease family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0006308 "DNA catabolic process"
evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0016797 "exonuclease activity, active with either ribo- or
deoxyribonucleic acids and producing 3'-phosphomonoesters"
evidence=ISS] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
RefSeq:NP_845863.2 ProteinModelPortal:Q81YF6 DNASU:1086387
EnsemblBacteria:EBBACT00000012965 GeneID:1086387 KEGG:ban:BA_3593
PATRIC:18784782 HOGENOM:HOG000095015 ProtClustDB:PRK06722
Uniprot:Q81YF6
Length = 273
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 6 VIDFEATCDKERNLHPQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFCKELTGI 65
+ D E ++ P EI++ ++I F V+P LT +LTGI
Sbjct: 1 MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGAR--LTRHTTKLTGI 58
Query: 66 QQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAY 125
+ + I + + +K++ +G ++ F VTW D + L +C + ++ P
Sbjct: 59 TKKDL---IGVEKFPQIIEKFIRFIG-EDSIF--VTWGKEDYR-FLSHDCTLHSVECPCM 111
Query: 126 FNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 112 EKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>UNIPROTKB|G4MV21 [details] [associations]
symbol:MGG_07327 "Asparagine-rich protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 Pfam:PF00929 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:CM001232 RefSeq:XP_003715562.1
EnsemblFungi:MGG_07327T0 GeneID:2683223 KEGG:mgr:MGG_07327
Uniprot:G4MV21
Length = 629
Score = 114 (45.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 38/142 (26%), Positives = 60/142 (42%)
Query: 4 YVVIDFEATCDKERNLH----PQEIIEFPXXXXXXXXXEIIACFQTYVRPTFEPLLTDFC 59
YVV+ TCD E ++ E+IE E + V+P P+ T C
Sbjct: 16 YVVLHAATTCD-EHGVYVTKDSAEVIELGWILLDAKTLEELHHESVLVKPVNTPI-TPLC 73
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRIK 118
LT + V N T +A+ D + + + N +F VT+ WD +V L E R K
Sbjct: 74 TSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVTFEAWDLRVQLPREARDK 133
Query: 119 KIQKPAYF--NQWINLRVPFSK 138
+ P Y ++ +LR + +
Sbjct: 134 SVVLPPYLQHSRTFDLRTEYQR 155
Score = 42 (19.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 166 LDDAINIARLLSVIMRRGFKFS-----ITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHT 220
+D+AI +AR+L ++R+ +T+ L +A+ R L + PH
Sbjct: 209 MDEAITLARVLRGLIRKSQPLQDHPDVLTRPLDARADVRAFLSERSKVLHMSGL---PHD 265
Query: 221 SLIHEFE 227
+ E E
Sbjct: 266 TTQSELE 272
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.476 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 277 268 0.00096 114 3 11 22 0.41 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 623 (66 KB)
Total size of DFA: 265 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.96u 0.10s 21.06t Elapsed: 00:00:01
Total cpu time: 20.96u 0.10s 21.06t Elapsed: 00:00:01
Start: Fri May 10 10:17:17 2013 End: Fri May 10 10:17:18 2013