BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036883
(277 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296087843|emb|CBI35099.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/280 (65%), Positives = 216/280 (77%), Gaps = 8/280 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK +N HPQEIIEFPSV+VS V+G++ ACFQTYVRPT +L+DFCK
Sbjct: 243 FQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQILSDFCK 302
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ NTNF+VVTWS+WDC+VMLESECR KKI
Sbjct: 303 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 362
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG V CNLKEAVE+AGL WQGR HCGLDDA N ARLL+ +M
Sbjct: 363 RKPPYFNRWINLKVPFREVFGGVWCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLM 422
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTP-----PHTSLIHEFEDCRYCYCG 235
RGFKFSIT SL QA + +W + L Y P P L H YCYCG
Sbjct: 423 HRGFKFSITNSLMWQATDHPESWKQSPELSSFPEYHPQKLREPTIPLFHYHP---YCYCG 479
Query: 236 AKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
KS K ++++PGPK+GSFFFGCGNWT RGA C+YF+WA+
Sbjct: 480 VKSSKGMVRKPGPKQGSFFFGCGNWTAARGARCHYFEWAS 519
>gi|359487133|ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853630 [Vitis vinifera]
Length = 415
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/280 (65%), Positives = 216/280 (77%), Gaps = 8/280 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK +N HPQEIIEFPSV+VS V+G++ ACFQTYVRPT +L+DFCK
Sbjct: 138 FQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQILSDFCK 197
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ NTNF+VVTWS+WDC+VMLESECR KKI
Sbjct: 198 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTNFAVVTWSNWDCRVMLESECRFKKI 257
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG V CNLKEAVE+AGL WQGR HCGLDDA N ARLL+ +M
Sbjct: 258 RKPPYFNRWINLKVPFREVFGGVWCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLM 317
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTP-----PHTSLIHEFEDCRYCYCG 235
RGFKFSIT SL QA + +W + L Y P P L H YCYCG
Sbjct: 318 HRGFKFSITNSLMWQATDHPESWKQSPELSSFPEYHPQKLREPTIPLFHYHP---YCYCG 374
Query: 236 AKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
KS K ++++PGPK+GSFFFGCGNWT RGA C+YF+WA+
Sbjct: 375 VKSSKGMVRKPGPKQGSFFFGCGNWTAARGARCHYFEWAS 414
>gi|255578253|ref|XP_002529994.1| conserved hypothetical protein [Ricinus communis]
gi|223530517|gb|EEF32399.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/278 (64%), Positives = 213/278 (76%), Gaps = 3/278 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKERN HPQEIIEFPSV+VS V+G++ ACFQTYVRPT L+DFCK
Sbjct: 133 FQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCK 192
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ NT+F+VVTWS+WDC+VMLESECR KKI
Sbjct: 193 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNTSFAVVTWSNWDCRVMLESECRFKKI 252
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG VRCNLKEAVE+AGL WQGR HCGLDDA N ARLL+ +M
Sbjct: 253 RKPPYFNRWINLKVPFREVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLAFLM 312
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIH--EFEDCRYCYCGAKS 238
R+G KFSIT SL Q L + P + Y P +H F CYCG KS
Sbjct: 313 RKGIKFSITNSLMWQTTDGSLALKQSPDRLP-SPYQPCKMKELHVPVFHYYPICYCGVKS 371
Query: 239 IKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATT 276
K ++++PGPK+GSFFFGCGNWT RG C YF+WA+T
Sbjct: 372 SKAMVRKPGPKQGSFFFGCGNWTAARGPRCQYFEWAST 409
>gi|357515343|ref|XP_003627960.1| ERI1 exoribonuclease [Medicago truncatula]
gi|355521982|gb|AET02436.1| ERI1 exoribonuclease [Medicago truncatula]
gi|388515457|gb|AFK45790.1| unknown [Medicago truncatula]
Length = 415
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 215/285 (75%), Gaps = 15/285 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ +VVIDFEATCDK++N HPQEIIEFPSV+VS V+G++ ACFQTYVRPT L+DFCK
Sbjct: 137 FQNFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCK 196
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ N NF+VVTWS+WDC+VMLESECR KKI
Sbjct: 197 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLESECRFKKI 256
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLRVPFS+VFG VRCNLKEAVE+AGL WQGR HCGLDDA N ARLL+++M
Sbjct: 257 RKPPYFNRWINLRVPFSEVFGAVRCNLKEAVEIAGLAWQGRAHCGLDDAKNTARLLALLM 316
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPH---------TSLIHEFEDCRY 231
RGFKFSIT S+ Q L W + P+ PH T +I C
Sbjct: 317 HRGFKFSITNSIMWQTADRSLIWKQ----SPEQPSAYPHFPFKARDMNTPIIQYHHPC-- 370
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATT 276
CYCG KS + ++++PGPK+GS FFGCGNWT RGA C+YF+WA+
Sbjct: 371 CYCGVKSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWASA 415
>gi|356556782|ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max]
Length = 414
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/282 (62%), Positives = 215/282 (76%), Gaps = 10/282 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK++N HPQEIIEFPSV+VS ++G++ ACFQTYVRPT LLTDFCK
Sbjct: 137 FQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTCNQLLTDFCK 196
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ N+NF+VVTWS+WDC+VMLESECR KKI
Sbjct: 197 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTWSNWDCRVMLESECRFKKI 256
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLR+PF +VFG VRCNLKEAVE+AGL WQGR HCGLDDA N A LL+++M
Sbjct: 257 RKPPYFNRWINLRIPFREVFGAVRCNLKEAVEIAGLAWQGRAHCGLDDAKNTAHLLALLM 316
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSL------IHEFEDCRYCYC 234
RGFKFSIT S+ Q L W + P+ PH+ I + +C+C
Sbjct: 317 HRGFKFSITNSIMWQTADRPLMWKQ----SPEQPIVFPHSPYKAKDITIPVVQYHPFCFC 372
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATT 276
G KS + ++++P PK+GS FFGCGNWT RGACC YF+WA+
Sbjct: 373 GVKSSRGMVRKPCPKQGSLFFGCGNWTATRGACCRYFEWASN 414
>gi|356548831|ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
Length = 414
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 219/284 (77%), Gaps = 14/284 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK++N HPQEIIEFPSV+VS ++G++ ACFQTYVRPT LL+DFCK
Sbjct: 137 FQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTCNQLLSDFCK 196
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ N+NF+VVTWS+WDC+VMLESECR KKI
Sbjct: 197 DLTGIQQIQVDRGVTLSEALLRHDKWLEKKGIKNSNFAVVTWSNWDCRVMLESECRFKKI 256
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLR+PF +VFG V+CNLKEAVE+AGL WQGR HCGLDDA N ARLL+++M
Sbjct: 257 RKPPYFNRWINLRIPFREVFGAVKCNLKEAVEIAGLAWQGRAHCGLDDAKNTARLLALLM 316
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPH--------TSLIHEFEDCRYC 232
RGFKFSIT S+ Q L W + P+ PH T+ + ++ +C
Sbjct: 317 HRGFKFSITNSIMWQTADRPLMWKQ----SPEQPIVFPHCPYKAKDITTPVVQYHP--FC 370
Query: 233 YCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATT 276
+CG KS + ++++PGPK+GS FFGCGNWT RGA C+YF+WA+
Sbjct: 371 FCGVKSSRGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWASN 414
>gi|449458085|ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
Length = 414
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/284 (61%), Positives = 216/284 (76%), Gaps = 16/284 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK+RN HPQEIIEFPSV+V+ V+G + ACFQTYVRPT L+DFC+
Sbjct: 137 FQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACFQTYVRPTCNQHLSDFCR 196
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL + G+ NTNF+VVTWS+WDC+VMLESECR KKI
Sbjct: 197 DLTGIQQIQVDRGVTLNEALLRHDKWLEKRGIKNTNFAVVTWSNWDCRVMLESECRFKKI 256
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG RCNLKEAVE+AGL W+GR HCGLDDA N ARLL++IM
Sbjct: 257 RKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWEGRAHCGLDDAKNTARLLALIM 316
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAM---------YTPPHTSLIHEFEDCRY 231
+GF+FSIT SL Q L W + P+ + P H ++ F Y
Sbjct: 317 HKGFRFSITNSLMWQTTDCPLQWKQ----SPETVTFPPQPPMKPKPMHIPIVQYFP---Y 369
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
C+CG +S + ++++PGPK+GSFFFGCGNWT +GA C+YF+WAT
Sbjct: 370 CFCGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFEWAT 413
>gi|118489625|gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 409
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/277 (63%), Positives = 212/277 (76%), Gaps = 3/277 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKERN HPQEIIEFPSV+VS V+G++ ACFQTYVRPT LL+DFCK
Sbjct: 133 FQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 192
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL G+ NT F+VVTWS+WDC+VMLESECR KKI
Sbjct: 193 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTKFAVVTWSNWDCRVMLESECRFKKI 252
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF ++FG RC LKEAVE+AGL WQGR HCGLDDA N ARLL+++M
Sbjct: 253 RKPPYFNRWINLKVPFHEIFGGARC-LKEAVEMAGLHWQGRAHCGLDDAKNTARLLALLM 311
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHE--FEDCRYCYCGAKS 238
RG +FSIT SL + L+ + A + P IH F +C+CG KS
Sbjct: 312 HRGIRFSITNSLMWHTTDSSLSCKQSTENLSLAPHQPHKLKEIHTPVFPYHPFCFCGVKS 371
Query: 239 IKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
K ++++PGPK+GS FFGCGNWT NRGA C+YF+WA+
Sbjct: 372 SKGMVRKPGPKQGSLFFGCGNWTANRGARCHYFEWAS 408
>gi|224057242|ref|XP_002299190.1| predicted protein [Populus trichocarpa]
gi|222846448|gb|EEE83995.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/277 (63%), Positives = 211/277 (76%), Gaps = 3/277 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKERN HPQEIIEFPSV+VS V+G++ ACFQTYVRPT LL+DFCK
Sbjct: 133 FQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCK 192
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL G+ NT F+VVTWS+WDC+VMLESECR KKI
Sbjct: 193 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTKFAVVTWSNWDCRVMLESECRFKKI 252
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +FG RC LKEAVE+AGL WQGR HCGLDDA N ARLL+++M
Sbjct: 253 RKPPYFNRWINLKVPFCDIFGGARC-LKEAVEMAGLHWQGRAHCGLDDAKNTARLLALLM 311
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIH--EFEDCRYCYCGAKS 238
RRG +FSIT SL + L+ + A + P IH F +C+CG KS
Sbjct: 312 RRGIRFSITNSLMWHTTDSSLSCKQSAENLSLAPHQPHKLKEIHIPVFPYHPFCFCGVKS 371
Query: 239 IKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
K ++++PGPK+GS FFGCGNWT RGA C+YF+WA+
Sbjct: 372 SKGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWAS 408
>gi|225435848|ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
Length = 425
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/288 (59%), Positives = 215/288 (74%), Gaps = 13/288 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKE+N HPQEIIEFPSV+V+ ++G++ FQ YVRPT LL+DFCK
Sbjct: 138 FQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLEDSFQIYVRPTCNHLLSDFCK 197
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVDNG+ L EAL HD+WL Q G+ +TNF+VVTWSDWDC+VMLESECR K+I
Sbjct: 198 ELTGIQQIQVDNGVLLSEALLMHDRWLEQKGIKHTNFAVVTWSDWDCRVMLESECRFKRI 257
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG++RCNLKEAV+ AGL+W+GR HCGLDDA N ARLL+ IM
Sbjct: 258 RKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLWEGRAHCGLDDAKNTARLLAHIM 317
Query: 181 RRGFKFSITKSLTPQANP---------NCL---TWNRHHFLEPQAMYTPPHTSLIHEFED 228
RGF+FSIT SL Q+ +C + H P + H + +D
Sbjct: 318 HRGFRFSITNSLIWQSTERPSIRQQFHDCQYGPIQHPHKLKHPLGPFMRFHPIPVEPEKD 377
Query: 229 C-RYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
YC+CG +S ++++++PGP GSFFFGCGNWT RGA C+YF+WAT
Sbjct: 378 LGTYCFCGVRSSRQMLRKPGPMHGSFFFGCGNWTAARGALCSYFEWAT 425
>gi|218187984|gb|EEC70411.1| hypothetical protein OsI_01406 [Oryza sativa Indica Group]
Length = 544
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/289 (58%), Positives = 211/289 (73%), Gaps = 16/289 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKE N HPQEIIEFPSV+V+ +G++ A FQTYVRP + LLTDFCK
Sbjct: 258 FQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAYNQLLTDFCK 317
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ L EAL HDKWL + G+ + NF+VVTWS+WDC+VMLESECR+K+I
Sbjct: 318 ELTGIQQIQVDRGVPLSEALLMHDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRI 377
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG VRCNLKEAV+L+GL W+GR HCGLDDA N ARLL+++M
Sbjct: 378 RKPPYFNRWINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLM 437
Query: 181 RRGFKFSITKSLTPQANPNCLTW----------NRHHFLEPQAMYTP----PHTSLIHEF 226
RGFKFSIT SL Q+ P +T N+ H + M +P P+ +
Sbjct: 438 HRGFKFSITNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMGSPVQVNPYAGIT--V 495
Query: 227 EDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
+ YC+CG S KV RPGP G +F+GCGNWT RGA C+Y+ W +
Sbjct: 496 KKPMYCHCGVLSQIKVTYRPGPMHGRYFYGCGNWTSTRGANCDYWVWLS 544
>gi|224072947|ref|XP_002303940.1| predicted protein [Populus trichocarpa]
gi|222841372|gb|EEE78919.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 211/281 (75%), Gaps = 11/281 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKERN HPQEIIEFPSV+VS V+G++ ACFQTYVRPT L+DFCK
Sbjct: 123 FQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQHLSDFCK 182
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGIQQ QVD G+TL EAL HDKWL G+ NT+F+VVTWS+WDC+VMLESECR KKI
Sbjct: 183 DLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTSFAVVTWSNWDCRVMLESECRFKKI 242
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF ++FG RC LKEAVE+AGL WQGR HCGLDDA N ARLL+++M
Sbjct: 243 RKPPYFNRWINLKVPFCEIFGGARC-LKEAVEMAGLEWQGRAHCGLDDAKNTARLLALLM 301
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTS------LIHEFEDCRYCYC 234
RG +FSIT SL + L + P+ + PH I F +C+C
Sbjct: 302 HRGIRFSITNSLMWNTTDSSLPCKQ----SPENLSFSPHQPQKLKEMRIPVFPYHPFCFC 357
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
G KS K ++++PGPK+GS FFGCGNWT RGA C+YF+WA+
Sbjct: 358 GVKSSKGMVRKPGPKQGSLFFGCGNWTATRGARCHYFEWAS 398
>gi|115435988|ref|NP_001042752.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|56783678|dbj|BAD81090.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|56784201|dbj|BAD81586.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|113532283|dbj|BAF04666.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|215737104|dbj|BAG96033.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618206|gb|EEE54338.1| hypothetical protein OsJ_01314 [Oryza sativa Japonica Group]
Length = 411
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/289 (58%), Positives = 211/289 (73%), Gaps = 16/289 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKE N HPQEIIEFPSV+V+ +G++ A FQTYVRP + LLTDFCK
Sbjct: 125 FQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAYNQLLTDFCK 184
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ L EAL HDKWL + G+ + NF+VVTWS+WDC+VMLESECR+K+I
Sbjct: 185 ELTGIQQIQVDRGVPLSEALLMHDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRI 244
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG VRCNLKEAV+L+GL W+GR HCGLDDA N ARLL+++M
Sbjct: 245 RKPPYFNRWINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLM 304
Query: 181 RRGFKFSITKSLTPQANPNCLT----------WNRHHFLEPQAMYTP----PHTSLIHEF 226
RGFKFSIT SL Q+ P +T N+ H + M +P P+ +
Sbjct: 305 HRGFKFSITNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMGSPVQVNPYAGIT--V 362
Query: 227 EDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
+ YC+CG S KV RPGP G +F+GCGNWT RGA C+Y+ W +
Sbjct: 363 KKPMYCHCGVLSQIKVTYRPGPMHGRYFYGCGNWTSTRGANCDYWVWLS 411
>gi|414877071|tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea mays]
Length = 433
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 206/302 (68%), Gaps = 27/302 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK N PQEIIEFPSV+V+ +G++ CFQTYVRPT+ LTDFCK
Sbjct: 132 FQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCK 191
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ LGEAL HDKWL G+ NTNF++VTWS+WDC++MLESECR K+I
Sbjct: 192 ELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRI 251
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLRVPF +V+GDVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 252 RKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLM 311
Query: 181 RRGFKFSITKSLT--PQANPNCLTWNRH-------------------------HFLEPQA 213
RGFKFSIT SL P A P H P +
Sbjct: 312 HRGFKFSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPAS 371
Query: 214 MYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
+ P + + + YCYCG S V+++PGP +G +FFGCGNWT R A C YF W
Sbjct: 372 LVNPSYATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAW 431
Query: 274 AT 275
A+
Sbjct: 432 AS 433
>gi|414877072|tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]
Length = 436
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 206/302 (68%), Gaps = 27/302 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK N PQEIIEFPSV+V+ +G++ CFQTYVRPT+ LTDFCK
Sbjct: 135 FQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCK 194
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ LGEAL HDKWL G+ NTNF++VTWS+WDC++MLESECR K+I
Sbjct: 195 ELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRI 254
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLRVPF +V+GDVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 255 RKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLM 314
Query: 181 RRGFKFSITKSLT--PQANPNCLTWNRH-------------------------HFLEPQA 213
RGFKFSIT SL P A P H P +
Sbjct: 315 HRGFKFSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPAS 374
Query: 214 MYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
+ P + + + YCYCG S V+++PGP +G +FFGCGNWT R A C YF W
Sbjct: 375 LVNPSYATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAW 434
Query: 274 AT 275
A+
Sbjct: 435 AS 436
>gi|226492270|ref|NP_001146741.1| uncharacterized protein LOC100280343 [Zea mays]
gi|219888569|gb|ACL54659.1| unknown [Zea mays]
Length = 427
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/302 (56%), Positives = 206/302 (68%), Gaps = 27/302 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK N PQEIIEFPSV+V+ +G++ CFQTYVRPT+ LTDFCK
Sbjct: 126 FQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCK 185
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ LGEAL HDKWL G+ NTNF++VTWS+WDC++MLESECR K+I
Sbjct: 186 ELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRI 245
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLRVPF +V+GDVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 246 RKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLM 305
Query: 181 RRGFKFSITKSLT--PQANPNCLTWNRH-------------------------HFLEPQA 213
RGFKFSIT SL P A P H P +
Sbjct: 306 HRGFKFSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPAS 365
Query: 214 MYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
+ P + + + YCYCG S V+++PGP +G +FFGCGNWT R A C YF W
Sbjct: 366 LVNPSYATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAW 425
Query: 274 AT 275
A+
Sbjct: 426 AS 427
>gi|242057047|ref|XP_002457669.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
gi|241929644|gb|EES02789.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
Length = 424
Score = 349 bits (895), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 170/288 (59%), Positives = 208/288 (72%), Gaps = 13/288 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK N PQEIIEFPSV+V+ +G++ CFQTYVRPT+ LTDFCK
Sbjct: 137 FQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCK 196
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ LGEAL HDKWL G+ NTNF++VTWS+WDC+ MLESECR K+I
Sbjct: 197 ELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRTMLESECRFKRI 256
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +V+GDVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 257 RKPPYFNRWINLKVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALMM 316
Query: 181 RRGFKFSITKSL----TPQANPNCLTWNR-----HHFLEPQAMYTPP----HTSLIHEFE 227
RGFKFSIT SL PQ+ L+ +R +P+ M P + +
Sbjct: 317 HRGFKFSITNSLVWQPAPQSTTCQLSPDRSPDPVQQQQKPKEMLGSPVQVNPYATSAGKD 376
Query: 228 DCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
YCYCG S V+++PGP +G +FFGCGNWT R A C YF WA+
Sbjct: 377 RAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 424
>gi|195629706|gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]
Length = 437
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 206/303 (67%), Gaps = 28/303 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK N PQEIIEFPSV+V+ +G++ CFQTYVRPT+ LTDFCK
Sbjct: 135 FQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPTYHQFLTDFCK 194
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ LGEAL HDKWL G+ NTNF++VTWS+WDC++MLESECR K+I
Sbjct: 195 ELTGIQQIQVDRGVPLGEALLMHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRI 254
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINLRVPF +V+GDVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 255 RKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLM 314
Query: 181 RRGFKFSITKSLT--PQANPNCLTWNRH-------------------------HFLEPQA 213
RGFKFSIT SL P A P H P +
Sbjct: 315 HRGFKFSITNSLVWQPAAAPQSTAATCHFSPDRSPDPVVVQLQHQHQQHKPKEALGSPAS 374
Query: 214 MYTPPHTSLIHEFED-CRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQ 272
P + + +D YCYCG S V+++PGP +G +FFGCGNWT R A C YF
Sbjct: 375 QVNPSYAATPAGGKDRAMYCYCGVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFA 434
Query: 273 WAT 275
WA+
Sbjct: 435 WAS 437
>gi|296083880|emb|CBI24268.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 346 bits (888), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 210/287 (73%), Gaps = 32/287 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKE+N HPQEIIEFPSV+V+ ++G++ FQ YVRPT LL+DFCK
Sbjct: 165 FQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLEDSFQIYVRPTCNHLLSDFCK 224
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVDNG+ L EAL HD+WL Q G+ +TNF+VVTWSDWDC+VMLESECR K+I
Sbjct: 225 ELTGIQQIQVDNGVLLSEALLMHDRWLEQKGIKHTNFAVVTWSDWDCRVMLESECRFKRI 284
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +VFG++RCNLKEAV+ AGL+W+GR HCGLDDA N ARLL+ IM
Sbjct: 285 RKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLWEGRAHCGLDDAKNTARLLAHIM 344
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCG----- 235
RGF+FSIT N L W Q+ P S+ +F DC+Y
Sbjct: 345 HRGFRFSIT---------NSLIW--------QSTERP---SIRQQFHDCQYGPIQHPHKL 384
Query: 236 -------AKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
+S ++++++PGP GSFFFGCGNWT RGA C+YF+WAT
Sbjct: 385 KHPLGPFMRSSRQMLRKPGPMHGSFFFGCGNWTAARGALCSYFEWAT 431
>gi|357131416|ref|XP_003567334.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 425
Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 168/290 (57%), Positives = 205/290 (70%), Gaps = 15/290 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDKE N HPQEIIEFPSV+V+ +G++ A FQTYVRP + LTDFCK
Sbjct: 136 FQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAYHQNLTDFCK 195
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QVD G+ L EAL HDKWL G+ + NF+VVTWS+WDC+VMLESECR K I
Sbjct: 196 ELTGIQQIQVDRGVPLSEALLMHDKWLEDKGIKHKNFAVVTWSNWDCRVMLESECRFKSI 255
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL+VPF +++G VRCNLK+AV+LAGL W+GR HCGLDDA N ARLL+++M
Sbjct: 256 RKPPYFNRWINLKVPFQEMYGGVRCNLKDAVQLAGLTWEGRAHCGLDDARNTARLLALLM 315
Query: 181 RRGFKFSITKSLTPQANPNCLTWN--RHHFLEP-------QAMYTPPHTSL------IHE 225
RGFKFSIT SL Q P +T LEP + M PH +
Sbjct: 316 HRGFKFSITNSLVWQPAPQQITCQPLPDRSLEPTQLQQKAKEMLLGPHVQVNPYAGSTAG 375
Query: 226 FEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
+ YCYCG S V+++PGP +G +F+GCGNWT R A C YF WA+
Sbjct: 376 KDKPMYCYCGVLSRWSVVRKPGPMQGRYFYGCGNWTVTRRAICPYFAWAS 425
>gi|294461520|gb|ADE76321.1| unknown [Picea sitchensis]
Length = 436
Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 196/297 (65%), Gaps = 32/297 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCD L PQEIIEFPSV+V+G++G + F TY++P + P+LTDFCK
Sbjct: 141 FQYFVVIDFEATCDMGTRLSPQEIIEFPSVLVNGMTGRLEGHFHTYIKPVYHPVLTDFCK 200
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ QV G++L EAL HD WL + G+ NTNF+VVTWSDWDC+VMLESEC +K I
Sbjct: 201 ELTGIQQSQVIGGVSLSEALLMHDNWLEERGVKNTNFAVVTWSDWDCKVMLESECNLKGI 260
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+KP YFN+WINL++PF FG +RCNLK AVE AGL W+GR H GLDDA N ARLL +M
Sbjct: 261 RKPNYFNRWINLKLPFYDSFGQLRCNLKGAVEFAGLTWEGRAHSGLDDAKNTARLLLDLM 320
Query: 181 RRGFKFSITKS-LTPQANPNCLTWNRHHFLEPQAMYTPPHT----SLIH----------- 224
RRG K +IT S L AN + L P M PP T SL+
Sbjct: 321 RRGIKLTITNSMLYASANGSTL---------PLPMQEPPKTGVSRSLVSQGSGQSLDSGP 371
Query: 225 -------EFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWA 274
E + C+CG S K VI++PGP+ G FFGCG W+ RGA C +F+WA
Sbjct: 372 WLNTTDVEKDTGALCFCGVPSNKCVIKKPGPRHGKTFFGCGKWSITRGAACEFFEWA 428
>gi|302755050|ref|XP_002960949.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
gi|300171888|gb|EFJ38488.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
Length = 397
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCD PQEIIEFPSV+V+ S + FQTYV+PTF P LTDFCK
Sbjct: 109 FDYFVVIDFEATCDSTV-FFPQEIIEFPSVLVAVHSLSVEDSFQTYVKPTFNPQLTDFCK 167
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI+Q QVDNG+ L EAL HDKWL G+ + F V+TW+DWDC+VML+ ECR+K +
Sbjct: 168 RLTGIEQTQVDNGMALAEALVKHDKWLEDKGVKSKRFGVITWTDWDCKVMLDFECRLKGL 227
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
KP+YFN+WINL+ F + FGD + NLK+AV+ AGL WQGR HCGLDDA N A L ++
Sbjct: 228 TKPSYFNKWINLKSCFQEKFGD-KFNLKKAVQHAGLQWQGREHCGLDDAKNTASLAMELV 286
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLE--PQAMYTPPHTSLIHEFEDC----RYCYC 234
RRG + T+ + + +T F+ + + P +S I E CYC
Sbjct: 287 RRGMQIGFTQHQS--SRKPAITNISSEFMPKLKKILEALPRSSDIDETSITVGADNLCYC 344
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
G K +++++ GP +G FF CGNWT G C YF+W
Sbjct: 345 GVKCKTRLVRKAGPNQGKFFLSCGNWTLTEGGKCTYFEW 383
>gi|302767276|ref|XP_002967058.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
gi|300165049|gb|EFJ31657.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
Length = 397
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCD PQEIIEFPSV+V+ S + FQTYV+PTF P LTDFCK
Sbjct: 109 FDYFVVIDFEATCDSTV-FFPQEIIEFPSVLVAVHSLSVEDSFQTYVKPTFNPQLTDFCK 167
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI+Q QVDNG+ L EAL HDKWL G+ + F V+TW+DWDC+VML+ ECR+K +
Sbjct: 168 RLTGIEQTQVDNGMALAEALVKHDKWLEDKGVKSKRFGVITWTDWDCKVMLDFECRLKGL 227
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
KP+YFN+WINL+ F + FGD + NLK+AV+ AGL WQGR HCGLDDA N A L ++
Sbjct: 228 TKPSYFNKWINLKSCFQEKFGD-KFNLKKAVQHAGLQWQGREHCGLDDAKNTASLAMELV 286
Query: 181 RRGFKFSITKSLTPQANPNCLTWNRHHFLE--PQAMYTPPHTSLIHEFEDC----RYCYC 234
+RG + T+ + + +T F+ + + P +S I E CYC
Sbjct: 287 KRGMQIGFTQHQS--SRKPAITNISSEFMPKLKKILEALPRSSDIDETSITVGADNLCYC 344
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
G K +++++ GP +G FF CGNWT G C YF+W
Sbjct: 345 GVKCKTRLVRKAGPNQGKFFLSCGNWTLTEGGKCTYFEW 383
>gi|242087831|ref|XP_002439748.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
gi|241945033|gb|EES18178.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
Length = 283
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 176/293 (60%), Gaps = 31/293 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VVIDFEATC + ++PQEIIEFPSV+V G +G ++ F+TYVRP P LTDFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGI Q VD G+TL EAL HD+WL G +VVTW DWDC+ MLE ECR K I
Sbjct: 62 DLTGITQGDVDAGVTLAEALGMHDRWLEAHGAKLGKLAVVTWGDWDCRTMLEGECRFKGI 121
Query: 121 QKPAYFNQWINLRVPFSKVFG--DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+KP YF+ WINLR+PFS FG +VR L++A+ AGL W+GR+HCGLDDA+N A LL
Sbjct: 122 EKPHYFDDWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 179 IMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMY--------TPPHTSLIHEFEDCR 230
+MRRG IT SL P+ +P EP+A P C
Sbjct: 182 LMRRGTLLKITGSLAPKRSPP--------RPEPKAALPCVGPRSVVPTLPPQPQVPLPCA 233
Query: 231 Y---------CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWA 274
C+CG S V+ PG +G +F+GCG WTP C++F WA
Sbjct: 234 AATGMDTVPCCFCGVASKLGVVATPGQMQGHYFYGCGWWTPT----CSFFMWA 282
>gi|242078527|ref|XP_002444032.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
gi|241940382|gb|EES13527.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
Length = 283
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 176/293 (60%), Gaps = 31/293 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VVIDFEATC + ++PQEIIEFPSV+V G +G ++ F+TYVRP P LTDFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGI Q VD G+TL EAL HD+WL G +VVTW DWDC+ ML+ ECR K I
Sbjct: 62 DLTGITQGDVDAGVTLAEALDMHDRWLEAHGAKLGKLAVVTWGDWDCRTMLDRECRFKGI 121
Query: 121 QKPAYFNQWINLRVPFSKVFG--DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+KP YF+ WINLR+PFS FG +VR L++A+ AGL W+GR+HCGLDDA+N A LL
Sbjct: 122 EKPHYFDDWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 179 IMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMY--------TPPHTSLIHEFEDCR 230
+MRRG IT SL P+ +P EP+A P C
Sbjct: 182 LMRRGTLLKITGSLEPKRSPP--------RPEPKAALPCVGPRSVVPTLPPQPQAPLPCA 233
Query: 231 Y---------CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWA 274
C+CG S V+ PG +G +F+GCG WTP C++F WA
Sbjct: 234 AAAGMDTVPCCFCGVASKLGVVATPGQMQGHYFYGCGWWTPT----CSFFMWA 282
>gi|242078557|ref|XP_002444047.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
gi|241940397|gb|EES13542.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
Length = 287
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 179/290 (61%), Gaps = 19/290 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VVIDFEATC + ++PQEIIEFPSV+V G +G ++ F+TYVRP P LTDFC+
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRPRHHPRLTDFCR 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGI Q VD G++L EAL HD WL G +VVTW DWDC+ MLE ECR K I
Sbjct: 62 DLTGITQGDVDAGVSLAEALEMHDHWLEAHGAKLGKLAVVTWGDWDCRTMLEGECRFKGI 121
Query: 121 QKPAYFNQWINLRVPFSKVFG--DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+KP YF+ WINLR+PFS FG +VR L++A+ AGL W+GR+HCGLDDA+N A LL
Sbjct: 122 EKPHYFDHWINLRLPFSAAFGVGNVRFTLQDAIRKAGLQWEGRLHCGLDDALNTAHLLVE 181
Query: 179 IMRRGFKFSITKSLTP-QANPNCLTWNRHHFLEPQAMYTPPHT------------SLIHE 225
+MRRG IT SL P Q+ P + P+++ + T +
Sbjct: 182 LMRRGTLLKITASLAPTQSPPRPQPKAALPCVGPRSVVSTLPTQPQPQPQLPLPCAAATG 241
Query: 226 FEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
+ C+CG S V+ PG +G +F+GCG WTP C++F WAT
Sbjct: 242 MDTVPCCFCGVASKLGVVATPGQMQGHYFYGCGWWTP----ICSFFMWAT 287
>gi|357122926|ref|XP_003563164.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 310
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 175/282 (62%), Gaps = 11/282 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ +VV+DFEA C+K+ ++PQEIIEFPSV+V G +G + + F+ YVRP P+LTDFC+
Sbjct: 27 FDCFVVVDFEAICEKDARIYPQEIIEFPSVLVDGATGRLASAFRRYVRPRHHPVLTDFCR 86
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL---NNTNFSVVTWSDWDCQVMLESECRI 117
ELTGI+Q VD G+ L EAL HD WL + L F+VVTW DWDC+ ML+ ECR
Sbjct: 87 ELTGIRQEDVDGGVDLAEALRLHDAWLEETMLATKKGGRFAVVTWGDWDCRSMLDKECRF 146
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + KPAYF++WINLRVPF FG R L+EAV AGL W+GR+HCGLDDAIN LL
Sbjct: 147 KGLTKPAYFDRWINLRVPFQAAFGGSGRVTLQEAVRAAGLEWEGRLHCGLDDAINTEYLL 206
Query: 177 SVIMRRGFKFSITKSLT--PQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRY--C 232
+M++G + +IT SL P + + + + P +H C
Sbjct: 207 VEVMQQGVQLAITGSLALPPPSKQQVVLPPPPQPQLQEILRPQPR---LHNGGAVAVGCC 263
Query: 233 YCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWA 274
YCG + + V+ GP +G +F+GCGN TP C+YF WA
Sbjct: 264 YCGLLARRGVVVASGPMQGKYFYGCGNLTPAMRPMCHYFMWA 305
>gi|115438614|ref|NP_001043587.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|54290428|dbj|BAD61298.1| unknown protein [Oryza sativa Japonica Group]
gi|113533118|dbj|BAF05501.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|215693971|dbj|BAG89138.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 169/275 (61%), Gaps = 12/275 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VV+DFEATC++ R ++PQEIIEFP+V+V +G +++ F+ YVRP P LTDFC+
Sbjct: 27 FDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFCR 86
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD G+ L EAL HD+WL G+ F+VVTW D DC+ MLE ECR K
Sbjct: 87 ELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRFK 146
Query: 119 KIQKPAYFNQWINLRVPFSKVF--GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I KPAYF++W++LRV F F G R L+EAV AGL W GR+HCGLDDA N ARLL
Sbjct: 147 GIAKPAYFDRWVDLRVHFEAAFGGGGQRVKLQEAVRAAGLEWVGRLHCGLDDACNTARLL 206
Query: 177 SVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGA 236
++RRG SIT SL P A P + + P + + CYCG
Sbjct: 207 VELLRRGVPISITGSL-PAAPPPLEQARKQQQQQEMQQLLVPCGAAV-------CCYCGV 258
Query: 237 KSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYF 271
S V+ PG + F+GCGNWT GA C +F
Sbjct: 259 ASTGGVMAMPGSTQRRCFYGCGNWTAVSGATCPFF 293
>gi|125571192|gb|EAZ12707.1| hypothetical protein OsJ_02624 [Oryza sativa Japonica Group]
Length = 304
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 131/275 (47%), Positives = 168/275 (61%), Gaps = 12/275 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VV+DFEATC++ R ++PQEIIEFP+V+V +G +++ F+ YVRP P LTDFC+
Sbjct: 27 FDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFCR 86
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD G+ L EAL HD+WL G+ F+VVTW D DC+ MLE ECR K
Sbjct: 87 ELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRFK 146
Query: 119 KIQKPAYFNQWINLRVPFSKVF--GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I KPAYF++W++LRV F F G R L+EAV AGL W GR+HCGLDDA ARLL
Sbjct: 147 GIAKPAYFDRWVDLRVHFEAAFGGGGQRVKLQEAVRAAGLEWVGRLHCGLDDACKTARLL 206
Query: 177 SVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGA 236
++RRG SIT SL P A P + + P + + CYCG
Sbjct: 207 VELLRRGVPISITGSL-PAAPPPLEQARKQQQQQEMQQLLVPCGAAV-------CCYCGV 258
Query: 237 KSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYF 271
S V+ PG + F+GCGNWT GA C +F
Sbjct: 259 ASTGGVMAMPGSTQRRCFYGCGNWTAVSGATCPFF 293
>gi|125526866|gb|EAY74980.1| hypothetical protein OsI_02878 [Oryza sativa Indica Group]
Length = 304
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/275 (47%), Positives = 168/275 (61%), Gaps = 12/275 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VV+DFEATC++ R ++PQEIIEFP+V+V +G +++ F+ YVRP P LTDFC+
Sbjct: 27 FDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRPRHHPRLTDFCR 86
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD G+ L EAL HD+WL G+ F+VVTW D DC+ MLE ECR K
Sbjct: 87 ELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGGGRFAVVTWGDADCRTMLEQECRFK 146
Query: 119 KIQKPAYFNQWINLRVPFSKVF--GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I KPAYF++W++LRV F F G R L+EAV AGL W GR+HCGLDDA N ARLL
Sbjct: 147 GIAKPAYFDRWVDLRVHFEAAFGGGGRRVKLQEAVRAAGLEWVGRLHCGLDDACNTARLL 206
Query: 177 SVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGA 236
++RRG SIT SL P A P + + P + + CYCG
Sbjct: 207 VELLRRGVPISITGSL-PAAPPPLEQARKQQQQQEMQQLLVPCGAAV-------CCYCGV 258
Query: 237 KSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYF 271
S V+ G + F+GCGNWT GA C +F
Sbjct: 259 ASTGGVMAMRGSTQRRCFYGCGNWTAVSGATCPFF 293
>gi|326487924|dbj|BAJ89801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 165/272 (60%), Gaps = 27/272 (9%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ + PQEIIEFP+V+V G +G + + F+ YVRP PLLT FC+ELTGI+Q
Sbjct: 20 FEATCVKDARIFPQEIIEFPAVLVDGATGRMESAFRRYVRPKHHPLLTQFCRELTGIRQE 79
Query: 69 QVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQKP 123
VD G+ LGEAL+ HD WL + N +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 80 DVDGGVDLGEALWLHDDWLKEATAGAGNKRSVRLAVVTWGDWDCRTMLEFECRFKGIEKP 139
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF+QWINLRVPF F G R NL+EAV AGL W+GR+HCGLDDA+ ARLL IMRR
Sbjct: 140 SYFDQWINLRVPFQAAFGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALKTARLLVAIMRR 199
Query: 183 GFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHTSLIHEFEDCRYCYCGAKSIKKV 242
G K +IT SL P + L +PQ PH S + CYCG +
Sbjct: 200 GVKITITGSLAPPLSAPILQ-------QPQ-----PHMSSYGGYSGTCLCYCG------L 241
Query: 243 IQRPGPKRGSFFFGCGNWTPNRGACCNYFQWA 274
R G +G F GC NW P GA F W+
Sbjct: 242 ANRGGVMQGKCFSGCANWGPAMGA---QFGWS 270
>gi|115485705|ref|NP_001067996.1| Os11g0525900 [Oryza sativa Japonica Group]
gi|77551213|gb|ABA94010.1| exonuclease family protein, expressed [Oryza sativa Japonica Group]
gi|113645218|dbj|BAF28359.1| Os11g0525900 [Oryza sativa Japonica Group]
Length = 319
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 178/294 (60%), Gaps = 27/294 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA-CFQTYVRPTFEPLLTDFC 59
F Y+VVID EATC++ R ++PQEIIEF SVVV G +GE +A F+ YVRP LTD+C
Sbjct: 20 FAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRPLHHRELTDYC 79
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--------NFSVVTWSDWDCQVML 111
+ELTGI Q VD G+ L EAL HD WL G+ N F+VVTW DWDC+ ML
Sbjct: 80 RELTGIAQADVDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGDWDCRTML 139
Query: 112 ESECRIKKI---QKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCG 165
E ECR K I KP YF++WINL+VPF +VF G R L+EA+ +AGL ++GR H G
Sbjct: 140 EGECRFKGIIGDGKPEYFDRWINLKVPFRQVFDRGGARRIGLEEALAVAGLAFEGRPHSG 199
Query: 166 LDDAINIARLLSVIMRR--GFKFSITKSLTPQANPN----CLTWNRHHFLEPQAMYTPPH 219
LDDA N ARLL+++MRR G + +IT SL P P + + A
Sbjct: 200 LDDARNTARLLALLMRRRGGVRLAITGSLPPPPRPPSQLVAIGASAAATPAAAAPGVGGG 259
Query: 220 TSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
+ +H YC CG S V +RPGP +G FFGCG WTP RGA C+YF W
Sbjct: 260 GARVH------YCQCGVASRVGVARRPGPTQGRRFFGCGRWTPARGAVCSYFVW 307
>gi|326529429|dbj|BAK04661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 167/327 (51%), Gaps = 67/327 (20%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ + PQEIIEFP+V+V G +G I + F+ YVRP P+LT FC+ELTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGRIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 69 QVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQKP 123
VD G+ LGEAL+ HD WL N +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF+QWINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IMRR
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 183 GFKFSITKSLTP------------------------------QANPNCLTWNRHHFLEPQ 212
G K +IT SL P + P T L P
Sbjct: 204 GVKMTITGSLAPLLPFEQEQQPRTSTCGGSPALAPPPLPFEQKQQPRTSTCGGSLALAPP 263
Query: 213 AMYTPPHTS---------------------LIHEFEDCRYC----YCGAKSIKKVIQRPG 247
PP T H C YCG V + G
Sbjct: 264 IQQQPPRTGPCDGSFPLVPAPIQQKQQQRPQPHIISPCGGSSATWYCG------VTTKGG 317
Query: 248 PKRGSFFFGCGNWTPNRGACCNYFQWA 274
+ G+ GC NWTP GA Y+ W+
Sbjct: 318 MEPGAMQSGCTNWTPAMGAVSPYYMWS 344
>gi|326490993|dbj|BAK05596.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 148/228 (64%), Gaps = 23/228 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F++++V+DFEATC+K+ ++PQEIIEFP+V+V G +G + + F+ Y+RP P LT FC+
Sbjct: 51 FDFFLVVDFEATCEKDARIYPQEIIEFPAVLVDGATGHLASAFRCYIRPKHHPALTKFCR 110
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-------NTNFSVVTWSDWDCQVMLES 113
+LTGI+Q VD G+ LG+AL HD WL + +VVTW DWDC+ MLE
Sbjct: 111 DLTGIRQEDVDGGVDLGQALRLHDAWLKAATTTGAGTKRCDGRLAVVTWGDWDCRTMLEF 170
Query: 114 ECRIKKIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
ECR K I+KP+YF++WINLRVPF G R NL+EAV +AGL W+GR+HCGLDDA N
Sbjct: 171 ECRFKGIEKPSYFDRWINLRVPFQAALGSGGRVNLQEAVRVAGLDWEGRLHCGLDDARNT 230
Query: 173 ARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPHT 220
ARLL+ +M RG K SIT SL L P PPHT
Sbjct: 231 ARLLADLMLRGVKMSITDSLA---------------LPPPIQRQPPHT 263
>gi|326504778|dbj|BAK06680.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 167/325 (51%), Gaps = 65/325 (20%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ + PQEIIEFP+V+V G +G I + F+ YVRP P+LT FC+ELTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGCIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 69 QVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQKP 123
VD G+ LGEAL+ HD WL N +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF+QWINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IMRR
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 183 GFKFSITKSLTP----------------------------QANPNCLTWNRHHFLEPQAM 214
G K +IT SL P + P T L P
Sbjct: 204 GVKMTITGSLAPLPLFEQEQQPRTSTCGGSPALAPPPFEQKQQPRTSTCGGPLVLAPPIQ 263
Query: 215 YTPPHTS---------------------LIHEFEDCRYC----YCGAKSIKKVIQRPGPK 249
PP T H C YCG V + G +
Sbjct: 264 QQPPRTGPCDGSFPLVLAPIQQKQQQWPQPHIISPCGGSSATWYCG------VATKGGME 317
Query: 250 RGSFFFGCGNWTPNRGACCNYFQWA 274
G+ GC NWTP GA Y+ W+
Sbjct: 318 PGAMQSGCTNWTPAMGAVSPYYLWS 342
>gi|326508370|dbj|BAJ99452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 167/325 (51%), Gaps = 65/325 (20%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ + PQEIIEFP+V+V G +G I + F+ YVRP P+LT FC+ELTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGRIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 69 QVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQKP 123
VD G+ LGEAL+ HD WL N +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF+QWINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IMRR
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 183 GFKFSITKSLTP----------------------------QANPNCLTWNRHHFLEPQAM 214
G K +IT SL P + P T L P
Sbjct: 204 GVKMTITGSLVPLPLFEQEQQPRTSTCGGSLAPAPPPFEQKQQPRTSTCGGPLVLAPPIQ 263
Query: 215 YTPPHTS---------------------LIHEFEDCRYC----YCGAKSIKKVIQRPGPK 249
PP T H C YCG V + G +
Sbjct: 264 QQPPCTGPCDGSFPLVLAPIQQKQQQWPQPHIISPCGGSSATWYCG------VATKGGME 317
Query: 250 RGSFFFGCGNWTPNRGACCNYFQWA 274
G+ GC NWTP GA Y+ W+
Sbjct: 318 PGAMQSGCTNWTPAMGAVPPYYLWS 342
>gi|326499798|dbj|BAJ90734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 167/325 (51%), Gaps = 65/325 (20%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ + PQEIIEFP+V+V G +G I + F+ YVRP P+LT FC+ELTGI+Q
Sbjct: 24 FEATCLKDARIFPQEIIEFPAVLVDGATGCIESAFRRYVRPKHHPVLTQFCRELTGIRQE 83
Query: 69 QVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQKP 123
+D G+ LGEAL+ HD WL N +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 84 DLDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF+QWINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IMRR
Sbjct: 144 SYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 183 GFKFSITKSLTP----------------------------QANPNCLTWNRHHFLEPQAM 214
G K +IT SL P + P T L P
Sbjct: 204 GVKMTITGSLAPLPLFEQEQQPRTSTCGGSPALAPPPFEQKQQPRTSTCGGPLVLAPPIQ 263
Query: 215 YTPPHTS---------------------LIHEFEDCRYC----YCGAKSIKKVIQRPGPK 249
PP T H C YCG V + G +
Sbjct: 264 QQPPRTGPCDGSFPLVLAPIQQKQQQWPQPHIISPCGGSSATWYCG------VATKGGME 317
Query: 250 RGSFFFGCGNWTPNRGACCNYFQWA 274
G+ GC NWTP GA Y+ W+
Sbjct: 318 PGAMQSGCTNWTPAMGAVSPYYLWS 342
>gi|326518256|dbj|BAJ92491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 140/194 (72%), Gaps = 6/194 (3%)
Query: 9 FEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQH 68
FEATC K+ ++PQEIIEFP+V+V G SG I + F+ YVRP P+LT FC++LTGI+Q
Sbjct: 24 FEATCVKDARIYPQEIIEFPAVLVDGASGRIESSFRRYVRPKHHPVLTQFCRKLTGIRQE 83
Query: 69 QVDNGITLGEALYFHDKWL--LQMGLNNT---NFSVVTWSDWDCQVMLESECRIKKIQKP 123
VD G+ LGEAL+ HD WL G ++ +VVTW DWDC+ MLE ECR K I+KP
Sbjct: 84 DVDGGVDLGEALWLHDAWLKAATAGAGSSRRVQLAVVTWGDWDCRTMLEFECRFKGIEKP 143
Query: 124 AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+YF++WINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IMRR
Sbjct: 144 SYFDRWINLRVPFQAALGGGGRVNLEEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRR 203
Query: 183 GFKFSITKSLTPQA 196
G K +IT SL P A
Sbjct: 204 GVKMTITGSLAPPA 217
>gi|238015266|gb|ACR38668.1| unknown [Zea mays]
Length = 221
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 140/221 (63%), Gaps = 27/221 (12%)
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG 141
HDKWL G+ NTNF++VTWS+WDC++MLESECR K+I+KP YFN+WINLRVPF +V+G
Sbjct: 1 MHDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYG 60
Query: 142 DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLT--PQANPN 199
DVRCNLKEAV+LAGL W+GR HCGLDDA N ARLL+++M RGFKFSIT SL P A P
Sbjct: 61 DVRCNLKEAVQLAGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQPAAAPQ 120
Query: 200 CLTWNRH-------------------------HFLEPQAMYTPPHTSLIHEFEDCRYCYC 234
H P ++ P + + + YCYC
Sbjct: 121 STAATCHFSPDRSPDPVVVQLQHQQQQHKPKEALGSPASLVNPSYATPAGGKDRAMYCYC 180
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
G S V+++PGP +G +FFGCGNWT R A C YF WA+
Sbjct: 181 GVLSRWSVVRKPGPMQGRYFFGCGNWTATRRAICPYFAWAS 221
>gi|215692771|dbj|BAG88201.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 144/208 (69%), Gaps = 16/208 (7%)
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG 141
HDKWL + G+ + NF+VVTWS+WDC+VMLESECR+K+I+KP YFN+WINL+VPF +VFG
Sbjct: 1 MHDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFG 60
Query: 142 DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCL 201
VRCNLKEAV+L+GL W+GR HCGLDDA N ARLL+++M RGFKFSIT SL Q+ P +
Sbjct: 61 GVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSITNSLVWQSAPQSI 120
Query: 202 TW----------NRHHFLEPQAMYTP----PHTSLIHEFEDCRYCYCGAKSIKKVIQRPG 247
T N+ H + M +P P+ + + YC+CG S KV RPG
Sbjct: 121 TCQSSPAHSPYPNQSHHKPMEVMGSPVQVNPYAGIT--VKKPMYCHCGVLSQIKVTYRPG 178
Query: 248 PKRGSFFFGCGNWTPNRGACCNYFQWAT 275
P G +F+GCGNWT RGA C+Y+ W +
Sbjct: 179 PMHGRYFYGCGNWTSTRGANCDYWVWLS 206
>gi|242084190|ref|XP_002442520.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
gi|241943213|gb|EES16358.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
Length = 238
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 130/199 (65%), Gaps = 5/199 (2%)
Query: 8 DFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
DF+ATC K + ++PQEIIEF SV+VSG +G++ + F TYVRP P LTD+C++L GI+Q
Sbjct: 40 DFKATCKKGKQINPQEIIEFSSVLVSGSTGQLESTFHTYVRPRLHPKLTDYCRDLNGIRQ 99
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTN---FSVVTWSDWDCQVMLESECRIKKIQKPA 124
VD G+ L AL H WL +MG ++ F VVTW +WDC+ MLE ECR+K I +P
Sbjct: 100 KDVDAGMELAVALRMHGTWLQEMGTKKSSHFCFVVVTWGNWDCRSMLEPECRLKGIDRPL 159
Query: 125 YFNQWINLRVPFSKVFGDV--RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
YF++WINLR+PF FG + +L +AV + G+ W+GR DDA N A LL +MRR
Sbjct: 160 YFDRWINLRIPFVATFGGSKPKADLADAVRMVGMEWEGRPRGASDDARNTALLLRELMRR 219
Query: 183 GFKFSITKSLTPQANPNCL 201
G + IT SL P P L
Sbjct: 220 GVELGITSSLVPMLAPQLL 238
>gi|357119528|ref|XP_003561489.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 244
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 6/207 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIAC-FQTYVRPTFEPLLTDFC 59
+Y+VV+DF+ATC+K +PQEIIEF SV+V V+G + F +Y+RP P+LTDFC
Sbjct: 32 LDYFVVVDFKATCEKGLMFNPQEIIEFSSVLVDPVTGNSESPPFHSYLRPQERPVLTDFC 91
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN---TNFSVVTWSDWDCQVMLESECR 116
+E GIQQ VD GI L EAL H+ WL + F++VTW DWDC+ ML+ ECR
Sbjct: 92 REYNGIQQTDVDKGIVLAEALPKHEAWLKEAETKKGRALRFAIVTWGDWDCRSMLDRECR 151
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGD--VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
K + P YF+QWI+L++PF FG + + +A+ AGL+W+GR + G +A N AR
Sbjct: 152 HKGVASPQYFHQWIDLKIPFMDKFGREYIPGSALKALTEAGLLWEGRRNGGFYNAHNKAR 211
Query: 175 LLSVIMRRGFKFSITKSLTPQANPNCL 201
LL ++++G +FSIT L + P L
Sbjct: 212 LLGFLVQQGVQFSITSKLEQKPAPKLL 238
>gi|443705651|gb|ELU02084.1| hypothetical protein CAPTEDRAFT_224647 [Capitella teleta]
Length = 394
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 157/321 (48%), Gaps = 45/321 (14%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFE+TC ++ PQEIIEFP+V+++ +GEI A FQ YV P P+L+ FC+
Sbjct: 35 FAYLIVLDFESTCWQDTKFKPQEIIEFPAVLLNTSNGEIEAHFQKYVVPLEYPILSAFCQ 94
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM------------GLNNTNFSVVTWSDWDCQ 108
+LTGI Q QVD+GI + L WL ++ + + VTWSDWD
Sbjct: 95 QLTGITQAQVDDGIPINHCLRSFTTWLQKIKQERNLVFNSVTDATSKGCTFVTWSDWDLG 154
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
V L +ECR K+++ PA N WI+LR + +G L +++ G+ + GR HCGLDD
Sbjct: 155 VCLRNECRRKQLRCPAELNSWIDLRAAYKTFYGRQPNGLNGSLKDLGMDYDGREHCGLDD 214
Query: 169 AINIARLLSVIMRRGFKFSITKSLTPQANPNCLT-------WNRHHFLEP---------- 211
A N A+L +M G +ITK+L + P LT N+ P
Sbjct: 215 AKNTAKLAWRMMCDGCILNITKTLDQGSIPIQLTALQPRVPANKRQAPAPLTSHMSNCSS 274
Query: 212 -----------QAMYTPPHTSLIHEFEDC-RYCYCGAKSIKKVIQRPGPKRGSFFFGCGN 259
++ Y P L + C CG ++ + V Q PGP G FF C
Sbjct: 275 VNDSVIGVTVNESSYRTPCNGLAPPLKRTPPMCQCGRRAKRHVTQTPGPNSGRTFFSCPQ 334
Query: 260 --WTPNRGAC--CNYFQWATT 276
+ + G C +F+W T
Sbjct: 335 RCYKSSDGKTFGCGFFKWEDT 355
>gi|194882086|ref|XP_001975144.1| GG22157 [Drosophila erecta]
gi|190658331|gb|EDV55544.1| GG22157 [Drosophila erecta]
Length = 223
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 4 YSYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIEAEFHKYILPIESPRLS 62
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNTNF----SVVTWS 103
+C ELTGIQQ VD+G+ L AL +WL + +N +N + VTW+
Sbjct: 63 TYCTELTGIQQKTVDSGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNIMGNCAFVTWT 122
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K AYFNQWI++R + + CN +A+E GL ++GR H
Sbjct: 123 DWDFGICLSKECTRKRMRKAAYFNQWIDVRAVYRSWYQYRPCNFTDALEHVGLAFEGRAH 182
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++R G FSITK LTP Q NPNC+
Sbjct: 183 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNPNCV 222
>gi|125534582|gb|EAY81130.1| hypothetical protein OsI_36313 [Oryza sativa Indica Group]
Length = 192
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 12/152 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA-CFQTYVRPTFEPLLTDFC 59
F Y+VVID EATC++ R ++PQEIIEF SVVV G +GE +A F+ YVRP LTD+C
Sbjct: 20 FAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRPLHHRELTDYC 79
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--------NFSVVTWSDWDCQVML 111
+ELTGI Q VD G+ L EAL HD WL G+ N F+VVTW DWDC+ ML
Sbjct: 80 RELTGIAQADVDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGDWDCRTML 139
Query: 112 ESECRIKKI---QKPAYFNQWINLRVPFSKVF 140
E ECR K I KP YF++WINL+VPF +++
Sbjct: 140 EGECRFKGIIGDGKPEYFDRWINLKVPFRQIY 171
>gi|326492964|dbj|BAJ90338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 123/267 (46%), Gaps = 65/267 (24%)
Query: 67 QHQVDNGITLGEALYFHDKWLLQMGLNNTN-----FSVVTWSDWDCQVMLESECRIKKIQ 121
Q VD G+ LGEAL+ HD WL N +VVTW DWDC+ MLE ECR K I+
Sbjct: 19 QEDVDGGVDLGEALWLHDAWLKAATAGAGNRRSGRLAVVTWGDWDCRTMLEFECRFKGIE 78
Query: 122 KPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
KP+YF+QWINLRVPF G R NL+EAV AGL W+GR+HCGLDDA+N ARLL+ IM
Sbjct: 79 KPSYFDQWINLRVPFQVALGGGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIM 138
Query: 181 RRGFKFSITKSLTP----------------------------QANPNCLTWNRHHFLEPQ 212
RRG K +IT SL P + P T L P
Sbjct: 139 RRGVKMTITGSLVPLPLFEQEQQPRTSTCGGSLAQAPPPFEQKQQPRTSTCGGPLVLAPP 198
Query: 213 AMYTPPHTS---------------------LIHEFEDCRYC----YCGAKSIKKVIQRPG 247
PP T H C YCG V + G
Sbjct: 199 IQQQPPCTGPCDGSFPLVLAPIQQKQQQWPQPHIISPCGGSSATWYCG------VATKGG 252
Query: 248 PKRGSFFFGCGNWTPNRGACCNYFQWA 274
+ G+ GC NWTP GA Y+ W+
Sbjct: 253 MEPGAMQSGCTNWTPAMGAVPPYYLWS 279
>gi|195431874|ref|XP_002063953.1| GK15944 [Drosophila willistoni]
gi|194160038|gb|EDW74939.1| GK15944 [Drosophila willistoni]
Length = 281
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIEFP+V+V+ +G++ A F Y+ P P L+
Sbjct: 62 YSYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKVEAEFHKYIMPIESPRLS 120
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWS 103
+C ELTGIQQ VDNGI L AL +WL + M +N N + VTW+
Sbjct: 121 SYCTELTGIQQKTVDNGIPLQTALMMFHEWLRKELRARNLVLPKMSKSNILGNCAFVTWT 180
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K YFNQWI++R + + + CN +A+ GL ++GR H
Sbjct: 181 DWDFGICLAKECSRKRMRKAVYFNQWIDVRAIYREWYKYRPCNFSDALAHVGLAFEGRAH 240
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L ++R G F+ITK LTP Q NPNC+
Sbjct: 241 SGIDDAKNLGSLTCKMVRDGALFAITKDLTPYQQLNPNCV 280
>gi|195486290|ref|XP_002091443.1| GE12237 [Drosophila yakuba]
gi|194177544|gb|EDW91155.1| GE12237 [Drosophila yakuba]
Length = 223
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 4 YTYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIEAEFHKYILPFESPRLS 62
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNTNF----SVVTWS 103
+C ELTGIQQ VD+G+ L AL +WL + +N +N + VTW+
Sbjct: 63 TYCTELTGIQQKTVDSGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNILGNCAFVTWT 122
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K AYFNQWI++R + + CN +A+ GL ++GR H
Sbjct: 123 DWDFGICLAKECTRKRMRKAAYFNQWIDVRAIYRSWYQYRPCNFTDALSHVGLAFEGRAH 182
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++R G FSITK LTP Q NPNC+
Sbjct: 183 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNPNCV 222
>gi|195382354|ref|XP_002049895.1| GJ21843 [Drosophila virilis]
gi|194144692|gb|EDW61088.1| GJ21843 [Drosophila virilis]
Length = 286
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F Y + +DFEATC E+ PQ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 67 FSYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPRLS 125
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWS 103
+C ELTGI+Q VD G+ L AL +WL + M +N N + VTW+
Sbjct: 126 TYCTELTGIEQKTVDTGVPLQTALMMFHEWLRKELRARNLLLPKMSKSNILGNCAFVTWT 185
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K YFNQWI++R + + + CN +A+ GL ++GR H
Sbjct: 186 DWDFGICLHKECTRKRMRKAPYFNQWIDVRAVYREWYKYRPCNFSDALSHVGLAFEGRAH 245
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++R G FSITK LTP Q NPNC+
Sbjct: 246 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNPNCV 285
>gi|195027065|ref|XP_001986404.1| GH20546 [Drosophila grimshawi]
gi|193902404|gb|EDW01271.1| GH20546 [Drosophila grimshawi]
Length = 288
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F Y + +DFEATC E+ PQ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 69 FSYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPFESPRLS 127
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWS 103
+C ELTGI Q VD+G+ L AL +WL + M +N N + VTW+
Sbjct: 128 TYCTELTGIDQKTVDSGVPLQTALMMFHEWLRKELRARNLLLPKMAKSNILGNCAFVTWT 187
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K YFNQWI++R + + + CN +A+ GL ++GR H
Sbjct: 188 DWDFGICLHKECSRKRMRKAPYFNQWIDVRAIYREWYKYRPCNFTDALSHVGLAFEGRAH 247
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++R G FSITK LTP Q NPNC+
Sbjct: 248 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNPNCV 287
>gi|195585608|ref|XP_002082573.1| GD11641 [Drosophila simulans]
gi|194194582|gb|EDX08158.1| GD11641 [Drosophila simulans]
Length = 281
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 128/217 (58%), Gaps = 18/217 (8%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y + +DFEATC + + + EIIEFP+V+V+ +G+I + F Y+ P P L+
Sbjct: 62 YSYVIAVDFEATCWENQAPPHWREAEIIEFPAVLVNLKTGKIESEFHQYILPIESPRLST 121
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLL-----------QMGLNNT--NFSVVTWSD 104
+C ELTGIQQ VD+GI L A+ ++WL +M +N N + VTW+D
Sbjct: 122 YCTELTGIQQKTVDSGIPLTTAIVMFNEWLRHEIRTRNLTLPKMNKSNVLGNCAFVTWTD 181
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KPAYFNQWI++R + + CN +A+ GL ++GR H
Sbjct: 182 WDFGICLAKECNRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGRAHS 241
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPN 199
G+DDA N+ L+ +MR G FSITK LTP Q NPN
Sbjct: 242 GIDDAKNLGALMCKMMRDGALFSITKDLTPYQQLNPN 278
>gi|291233033|ref|XP_002736458.1| PREDICTED: Eri3 protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 3/196 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATC+K ++PQEIIE P + + + E A F TYV+PT P+LT FC
Sbjct: 20 YNYFLVLDFEATCEKSTKIYPQEIIEIPVLKIHAKTFETEAIFHTYVQPTANPILTPFCT 79
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q V + EAL DKW+L GL T F VT DWD + ML +C+
Sbjct: 80 ELTGITQDVVCGKPKIEEALKMLDKWMLDQGLLDGETAFVFVTCGDWDLKTMLPGQCKYF 139
Query: 119 KIQKPAYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
++ YF WIN++ PFS+V ++R +L E +++ L GR H G+DD NIA +L
Sbjct: 140 RLPIANYFKSWINIKRPFSEVVRPNIRVDLMEMLQMLDLEHHGRHHSGIDDTKNIANILQ 199
Query: 178 VIMRRGFKFSITKSLT 193
+ +RG KF T LT
Sbjct: 200 ELAKRGCKFKATSGLT 215
>gi|170053941|ref|XP_001862902.1| exonuclease [Culex quinquefasciatus]
gi|167874372|gb|EDS37755.1| exonuclease [Culex quinquefasciatus]
Length = 369
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 15/209 (7%)
Query: 1 FEYYVVIDFEATCDKERNLH--PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F Y VV+DFEATC E+++ EIIEFP+V+++ V+G++ A FQ +V P P L++F
Sbjct: 155 FRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQFQQFVMPVENPRLSEF 214
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM-------------GLNNTNFSVVTWSDW 105
C +LTGI+Q QV+ G+ L L KWL Q+ G + + + TWSDW
Sbjct: 215 CTKLTGIRQDQVEGGVPLKTCLPLFGKWLKQVLGERGLVLPKTDPGNQSGSVAFATWSDW 274
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D L EC K+I+KPA F+QWI++R + K + N EA++ GL ++GR H G
Sbjct: 275 DFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHRPLNFGEALDKRGLGFEGRPHSG 334
Query: 166 LDDAINIARLLSVIMRRGFKFSITKSLTP 194
LDD+ N+ARL++ + + G F ITK L P
Sbjct: 335 LDDSKNLARLITRMCKDGANFVITKDLRP 363
>gi|194756028|ref|XP_001960281.1| GF13284 [Drosophila ananassae]
gi|190621579|gb|EDV37103.1| GF13284 [Drosophila ananassae]
Length = 284
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 127/220 (57%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 65 YTYVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPRLS 123
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWS 103
+C ELTGIQQ VD G+ L AL +WL + M +N N + VTW+
Sbjct: 124 TYCTELTGIQQKTVDGGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVTWT 183
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K AYFNQWI++R + + CN +A+ GL ++GR H
Sbjct: 184 DWDFGICLAKECTRKRMRKAAYFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLAFEGRAH 243
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++ G FSITK LTP Q N NC+
Sbjct: 244 SGIDDAKNLGALMCKMVSDGALFSITKDLTPYQQLNANCV 283
>gi|170051987|ref|XP_001862016.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
gi|167872972|gb|EDS36355.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
Length = 260
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 15/209 (7%)
Query: 1 FEYYVVIDFEATCDKERNLH--PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F Y VV+DFEATC E+++ EIIEFP+V+++ V+G++ A FQ +V P P L++F
Sbjct: 46 FRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQFQQFVMPVENPRLSEF 105
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM-------------GLNNTNFSVVTWSDW 105
C +LTGI+Q QV+ G+ L L KWL Q+ G + + + TWSDW
Sbjct: 106 CTKLTGIRQDQVEGGVPLKTCLPLFGKWLKQVLGERGLVLPKTDPGNQSGSVAFATWSDW 165
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D L EC K+I+KPA F+QWI++R + K + N EA++ GL ++GR H G
Sbjct: 166 DFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHRPLNFGEALDKRGLGFEGRPHSG 225
Query: 166 LDDAINIARLLSVIMRRGFKFSITKSLTP 194
LDD+ N+ARL++ + + G F ITK L P
Sbjct: 226 LDDSKNLARLITRMCKDGANFVITKDLRP 254
>gi|348540662|ref|XP_003457806.1| PREDICTED: ERI1 exoribonuclease 2-like [Oreochromis niloticus]
Length = 628
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 16/208 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +VIDFE+TC +E+N QEIIEFP+V+++ +GE+ + F TYV+P P+L+DFC
Sbjct: 32 FSYLIVIDFESTCWREKNNRSQEIIEFPAVLLNTSTGEVESEFHTYVQPQEHPILSDFCT 91
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL----LQMGLNNTNF------------SVVTWSD 104
ELTGI Q QV+ GI L L +WL L+MG+ N + +TWSD
Sbjct: 92 ELTGITQMQVEAGIPLQICLSRFSRWLQNLQLEMGVAFANKDQRCSGPSQKLCTFLTWSD 151
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V L+ EC+ K++ KP N WI+LR + + L A++ G+ + GR H
Sbjct: 152 WDLGVCLQYECKRKQLHKPDVLNSWIDLRSTYRLFYNRKPKGLNGALQDLGIQFSGREHS 211
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDDA N A+L + +MR G IT+SL
Sbjct: 212 GLDDARNTAQLAARMMRDGCIMKITRSL 239
>gi|195346611|ref|XP_002039851.1| GM15878 [Drosophila sechellia]
gi|194135200|gb|EDW56716.1| GM15878 [Drosophila sechellia]
Length = 281
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 18/217 (8%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y + +DFEATC + + + EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 62 YSYVIAVDFEATCWENQAPPHWREAEIIEFPAVLVNLKTGKIEAEFHQYILPIESPRLST 121
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ------MGLNNTNFS-------VVTWSD 104
+C ELTGIQQ VD+GI L A+ +WL + L TN S VTW+D
Sbjct: 122 YCTELTGIQQKTVDSGIPLQTAMVMFHEWLRNEMRARNLTLPKTNKSNILGNCAFVTWTD 181
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+K AYFNQWI++R + + CN +A+ GL ++GR H
Sbjct: 182 WDFGICLAKECNRKGIRKAAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGRAHS 241
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPN 199
G+DDA N+ L+ +MR G FSITK LTP Q NPN
Sbjct: 242 GIDDAKNLGALMCKMMRDGALFSITKDLTPYQQLNPN 278
>gi|410917872|ref|XP_003972410.1| PREDICTED: ERI1 exoribonuclease 2-like [Takifugu rubripes]
Length = 359
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 152/313 (48%), Gaps = 57/313 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +VIDFE+TC +E+N + QEIIEFP+V+++ +GE+ + F TYV+P P L+ FC
Sbjct: 33 FSHLIVIDFESTCWREKNNYSQEIIEFPAVLLNACTGEVESEFHTYVQPQEHPTLSGFCT 92
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL----LQMGL---NNTNFSV-----------VTW 102
ELTGI Q QV+ GI L + +WL + MGL NN + +TW
Sbjct: 93 ELTGITQMQVEAGIPLQICMSRFSRWLQNLQMNMGLVFPNNPQMASAAAASRNLCTFLTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V L+ ECR K+I KP N WI+LR + + LK A++ G+ + GR
Sbjct: 153 SDWDLGVCLQYECRRKQIHKPDVLNSWIDLRGTYRLFYDRKPKGLKGALQDLGIQFAGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT------PQANPNCL------TWNRHHFLE 210
H GLDDA N A+L + +MR G +T+SLT P A P+ + T
Sbjct: 213 HSGLDDARNTAQLAARMMRDGCVMKVTRSLTRVSGRHPMA-PSVVKHICGNTAGDDKEEN 271
Query: 211 PQAMYTPPHTSLIHEFEDCR--------------------------YCYCGAKSIKKVIQ 244
P+ + + + D R C CG ++ ++++
Sbjct: 272 PKPHFGLAKDASLRHLCDARGKLCDANILCARSNCSLTGGQRVTSPLCSCGRRAKRQLVS 331
Query: 245 RPGPKRGSFFFGC 257
GP G FF C
Sbjct: 332 NGGPNHGRGFFCC 344
>gi|432847752|ref|XP_004066132.1| PREDICTED: ERI1 exoribonuclease 2-like [Oryzias latipes]
Length = 504
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 26/247 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +VIDFE+TC +E+N QEIIEFP+V+++ +G+I + F T+V+P P L++FC
Sbjct: 32 FSYLIVIDFESTCWREKNTSSQEIIEFPAVLLNTSTGDIDSEFHTFVQPQEHPTLSEFCT 91
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL----LQMGL--------NNTNFSV------VTW 102
ELTGI Q QV+ G+ L L +WL L+MG ++++ S +TW
Sbjct: 92 ELTGITQVQVEAGLPLQICLSRFTRWLQSLQLEMGFTFPNKQQGSSSSLSTQKLCTFLTW 151
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V L+ EC+ K++ KP FN WI+LR + + L A++ GL + GR
Sbjct: 152 SDWDLGVCLQYECKRKQLHKPDVFNNWIDLRSTYRLWYNRKPKGLNGALQDLGLQFDGRE 211
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL--TP------QANPNCLTWNRHHFLEPQAM 214
H GLDDA N ARL + +MR G IT+SL TP N LT N L
Sbjct: 212 HSGLDDARNTARLAAKMMRDGCVMKITRSLDRTPVVVKGVTGNATRLTNNTKEKLTVSKN 271
Query: 215 YTPPHTS 221
T P TS
Sbjct: 272 ETGPSTS 278
>gi|221330522|ref|NP_726151.2| snipper, isoform G [Drosophila melanogaster]
gi|159884093|gb|ABX00725.1| IP11159p [Drosophila melanogaster]
gi|220902332|gb|AAM68201.2| snipper, isoform G [Drosophila melanogaster]
Length = 384
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 20/217 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ P+ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 165 YSYVIAVDFEATC-WEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRLS 223
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLL-----------QMGLNNT--NFSVVTWS 103
+C ELTGIQQ VD+G+ L A+ ++WL +M +N N + VTW+
Sbjct: 224 AYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWT 283
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K I+KPAYFNQWI++R + + CN +A+ GL ++G+ H
Sbjct: 284 DWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKAH 343
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANP 198
G+DDA N+ L+ ++R G FSITK LTP Q NP
Sbjct: 344 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNP 380
>gi|24657520|ref|NP_726149.1| snipper, isoform F [Drosophila melanogaster]
gi|24657528|ref|NP_726150.1| snipper, isoform E [Drosophila melanogaster]
gi|10727027|gb|AAF46791.2| snipper, isoform E [Drosophila melanogaster]
gi|21626519|gb|AAM68200.1| snipper, isoform F [Drosophila melanogaster]
Length = 223
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 20/217 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ P+ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 4 YSYVIAVDFEATC-WEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRLS 62
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLL-----------QMGLNNT--NFSVVTWS 103
+C ELTGIQQ VD+G+ L A+ ++WL +M +N N + VTW+
Sbjct: 63 AYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWT 122
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K I+KPAYFNQWI++R + + CN +A+ GL ++G+ H
Sbjct: 123 DWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKAH 182
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANP 198
G+DDA N+ L+ ++R G FSITK LTP Q NP
Sbjct: 183 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNP 219
>gi|28573607|ref|NP_611632.3| snipper, isoform D [Drosophila melanogaster]
gi|16769080|gb|AAL28759.1| LD16074p [Drosophila melanogaster]
gi|28380656|gb|AAM68199.2| snipper, isoform D [Drosophila melanogaster]
gi|220943044|gb|ACL84065.1| CG42257-PD [synthetic construct]
gi|220953182|gb|ACL89134.1| CG42257-PD [synthetic construct]
Length = 281
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 20/217 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ P+ EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 62 YSYVIAVDFEATC-WEKQAPPEWREAEIIEFPAVLVNLKTGKIEAEFHQYILPFESPRLS 120
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLL-----------QMGLNNT--NFSVVTWS 103
+C ELTGIQQ VD+G+ L A+ ++WL +M +N N + VTW+
Sbjct: 121 AYCTELTGIQQKTVDSGMPLRTAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWT 180
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K I+KPAYFNQWI++R + + CN +A+ GL ++G+ H
Sbjct: 181 DWDFGICLAKECSRKGIRKPAYFNQWIDVRAIYRSWYKYRPCNFTDALSHVGLAFEGKAH 240
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANP 198
G+DDA N+ L+ ++R G FSITK LTP Q NP
Sbjct: 241 SGIDDAKNLGALMCKMVRDGALFSITKDLTPYQQLNP 277
>gi|11138061|dbj|BAB17734.1| OSJNBa0036E02.8 [Oryza sativa Japonica Group]
Length = 161
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 16/161 (9%)
Query: 129 WINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSI 188
WINL+VPF +VFG VRCNLKEAV+L+GL W+GR HCGLDDA N ARLL+++M RGFKFSI
Sbjct: 3 WINLKVPFQEVFGGVRCNLKEAVQLSGLTWEGRAHCGLDDARNTARLLALLMHRGFKFSI 62
Query: 189 TKSLTPQANPNCLTW----------NRHHFLEPQAMYTP----PHTSLIHEFEDCRYCYC 234
T SL Q+ P +T N+ H + M +P P+ + + YC+C
Sbjct: 63 TNSLVWQSAPQSITCQSSPAHSPYPNQSHHKPMEVMGSPVQVNPYAGIT--VKKPMYCHC 120
Query: 235 GAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWAT 275
G S KV RPGP G +F+GCGNWT RGA C+Y+ W +
Sbjct: 121 GVLSQIKVTYRPGPMHGRYFYGCGNWTSTRGANCDYWVWLS 161
>gi|195122902|ref|XP_002005949.1| GI18816 [Drosophila mojavensis]
gi|193911017|gb|EDW09884.1| GI18816 [Drosophila mojavensis]
Length = 223
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F + + +DFEATC E+ PQ EIIEFP+V+V+ +G+I + F YV P P L+
Sbjct: 4 FSHVIAVDFEATC-WEKQAPPQWREAEIIEFPAVLVNLKTGKIESEFHKYVMPIESPRLS 62
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ------MGLNNT-------NFSVVTWS 103
+C ELTGI+Q VD G+ L AL +WL + + L T N + VTW+
Sbjct: 63 TYCTELTGIEQKTVDTGVPLQTALMMFHEWLRKELRSRNLILPKTSKSNLLGNCAFVTWT 122
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K YFNQW+++R + + + CN +A+ GL ++GR H
Sbjct: 123 DWDFGICLHKECTRKRMRKAPYFNQWVDVRAIYREWYKYRPCNFSDALSHVGLAFEGRAH 182
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++R G FSITK LTP NPNC+
Sbjct: 183 SGIDDAKNLGALMYKMVRDGALFSITKDLTPYQTLNPNCI 222
>gi|290992875|ref|XP_002679059.1| exonuclease III protein [Naegleria gruberi]
gi|284092674|gb|EFC46315.1| exonuclease III protein [Naegleria gruberi]
Length = 220
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 121/190 (63%), Gaps = 1/190 (0%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y++V+DFEA+CD + EIIEFP+V ++ + +I F YV+P P+LTDFCK
Sbjct: 14 FDYFLVLDFEASCDDKIKNFRNEIIEFPTVAINAKTVKIDHEFHYYVKPKANPILTDFCK 73
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGIQQ +DNG+ + L FH++W++ ++ N F+ VT DWD + M+ +CR +
Sbjct: 74 ELTGIQQDWIDNGVEFEDVLKFHNQWMMDNFISKNLTFAFVTCGDWDLKTMITKQCRKEN 133
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
I+ P+YF+ W+N++ +++++ + + + L G+ H G+DD NIAR+L +
Sbjct: 134 IKVPSYFSSWVNIKKKYTEIYSKHVHGMTDMLNHMKLELIGKHHSGIDDCKNIARILCEM 193
Query: 180 MRRGFKFSIT 189
+++G + IT
Sbjct: 194 LKQGKQIDIT 203
>gi|358336849|dbj|GAA55310.1| ERI1 exoribonuclease 3 [Clonorchis sinensis]
Length = 230
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y++V+DFEATC++ R L P EIIEFP V ++ + + F Y++P F P LTDFC
Sbjct: 36 FKYFLVLDFEATCERNRKLRPAEIIEFPVVKLNSQTLLEESIFHHYIQPVFHPELTDFCT 95
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--NFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VDN L E L D+WL++ L T F+ VT DWD + ML S+CR
Sbjct: 96 ELTGIIQDMVDNQPRLEEVLQLFDEWLVKEKLTGTENTFTFVTCGDWDLRTMLPSQCREL 155
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P YF QWIN++ F V G +L + L QGR H G+DDA NIA +L
Sbjct: 156 GIPVPHYFRQWINIKQTFQDVRGLFPHSLPHMLSDLDLPLQGRHHSGIDDARNIATVLCQ 215
Query: 179 IMRRGFKFSITKSLT 193
+++ G IT SL
Sbjct: 216 LIKLGAVPDITGSLA 230
>gi|440791054|gb|ELR12308.1| exonuclease [Acanthamoeba castellanii str. Neff]
Length = 277
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 117/211 (55%), Gaps = 21/211 (9%)
Query: 3 YYVVIDFEATCDKE--RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y+VV+D EATCD++ RN +PQEIIEF +V+ S + E+ FQ YV+P P+LT FC
Sbjct: 63 YFVVLDLEATCDEDWNRNFYPQEIIEFSAVLWSTATHEVEDTFQVYVKPLVHPVLTPFCH 122
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL------------------NNTNFSVVTW 102
LTGI Q VDNG +L E L +WL + L ++ F + TW
Sbjct: 123 HLTGIHQEWVDNGASLQECLQMFHEWLERHDLLLAPRPTSTMPASTSITTTSSAFWLATW 182
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGR 161
SDWD MLE++C + K YFNQW++L+ + + + R L EAV GL W+G
Sbjct: 183 SDWDLGTMLEAQCIRTCLDKEPYFNQWVDLKQLYMRYYSKKFRVKLSEAVASLGLGWEGA 242
Query: 162 VHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
HC LDD N +RLL I+ G +T +L
Sbjct: 243 EHCALDDCRNTSRLLGKIIEHGHPVYLTSAL 273
>gi|291390710|ref|XP_002711856.1| PREDICTED: exoribonuclease 2 [Oryctolagus cuniculus]
Length = 689
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 131/224 (58%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +GEI + F TYV+P P+L++FC
Sbjct: 34 FQYLIVIDFESTCWNDGKHHHNQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIVFSTGVSEPSSSEVQPCTFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
GLDD+ N A L ++R G IT+SL + NPN LT N
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNPNILTRN 257
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC+YF+W T
Sbjct: 595 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYHENR-KCCDYFKWEQT 640
>gi|195154276|ref|XP_002018048.1| GL16972 [Drosophila persimilis]
gi|198460377|ref|XP_002138824.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
gi|194113844|gb|EDW35887.1| GL16972 [Drosophila persimilis]
gi|198136995|gb|EDY69382.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 124/216 (57%), Gaps = 18/216 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIEFP+V+V+ +G++ A F TYV P P L+
Sbjct: 4 YTYAISVDFEATC-WEKQAPPQWRESEIIEFPAVLVNLKTGKVEAEFHTYVMPLESPRLS 62
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ------MGLNNTNFS-------VVTWS 103
++C ELTGIQQ V+ G+ L AL +WL + L TN S VTW+
Sbjct: 63 NYCTELTGIQQKTVEAGVPLQTALNLFCEWLRNELRVRNLVLPKTNKSNILGNCAFVTWT 122
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+I+KPA FNQWI+ R + + + CN +A+ L ++GR H
Sbjct: 123 DWDFGICLAKECTRKRIRKPACFNQWIDARAIYREWYKYRPCNFADALSHVDLAFEGRAH 182
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ ++R G FSITK LTP N
Sbjct: 183 SGIDDAKNLGALICKMVRDGALFSITKDLTPYQQLN 218
>gi|301604764|ref|XP_002932007.1| PREDICTED: ERI1 exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 693
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 16/208 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FEY ++IDFE+TC K+ QEIIEFP+V+++ +GEI + F TYV+P P+L++FC
Sbjct: 35 FEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVANGEIESEFHTYVQPQEHPILSEFCT 94
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM----------------GLNNTNFSVVTWSD 104
ELTGI+Q QVDNG+ L L + W+ ++ + + VTWSD
Sbjct: 95 ELTGIKQLQVDNGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSAAEHKMCAFVTWSD 154
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V L ECR K+++KP N WI+LR + + L A++ G+ + GR H
Sbjct: 155 WDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHS 214
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A+L ++R G ITKSL
Sbjct: 215 GLDDSRNTAKLAWRMIRDGCVMKITKSL 242
>gi|126334116|ref|XP_001366655.1| PREDICTED: ERI1 exoribonuclease 2 [Monodelphis domestica]
Length = 696
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 138/257 (53%), Gaps = 32/257 (12%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y ++IDFE+TC + ++ + QEIIEFP+V+++ ++GEI + FQTYV+P P+L+ FC
Sbjct: 35 FDYLIIIDFESTCWNDGKHHYSQEIIEFPAVLLNTLTGEIESEFQTYVQPEEHPILSKFC 94
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKW--LLQMG---------LNNTNFSV-----VTWS 103
ELTGI+Q QVD G+ L L KW L+Q NN+ V VTWS
Sbjct: 95 IELTGIKQAQVDEGVPLKICLSQFCKWIHLIQQQKKITFAPSITNNSASEVKSCAFVTWS 154
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE ECR K+++KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 155 DWDLGVCLEYECRRKQLRKPIFLNSWIDLRATYKLFYRRKPKGLSGALQELGIEFSGREH 214
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL--------TPQANPNCLTWNRHHFLEPQAMY 215
GLDD+ N A L ++R G ITKSL +P LT N Q
Sbjct: 215 SGLDDSRNTAHLAWRMIRDGCIMKITKSLDKVPPSKKSPDYVARALTLN-------QTED 267
Query: 216 TPPHTSLIHEFEDCRYC 232
TP H + I +C
Sbjct: 268 TPGHENTIQTSSTDGFC 284
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ + GP G F+ C G + NR C YF+W T
Sbjct: 603 CNCGRRSKRLIVSKNGPNHGKAFYSCPVGKYQKNRKN-CGYFKWEQT 648
>gi|348584174|ref|XP_003477847.1| PREDICTED: ERI1 exoribonuclease 2-like [Cavia porcellus]
Length = 690
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 22/226 (9%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +VIDFE+TC + ++ + QEIIEFP+V+++ +GEI + F TYV+P P+L++FC
Sbjct: 34 YDYIIVIDFESTCWNDGKHHNSQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPVLSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF----------------SVVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ F + VTWS
Sbjct: 94 IELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIFFTTGISEPSTCEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLT-----PQANPNCLTWN 204
GLDD+ N A L +++ G ITKSL P+ NPN L N
Sbjct: 214 SGLDDSRNTALLAWKMIKDGCLMKITKSLNKVSGVPKKNPNILARN 259
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR C+YF+W T
Sbjct: 596 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKP-CDYFKWEQT 641
>gi|148227894|ref|NP_001089039.1| ERI1 exoribonuclease 2 [Xenopus laevis]
gi|82179168|sp|Q5HZL1.1|ERI2_XENLA RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|57032602|gb|AAH88972.1| Exod1 protein [Xenopus laevis]
Length = 687
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 16/208 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FEY ++IDFE+TC K+ QEIIEFP+V+++ +GEI + F TYV+P P+L+DFC
Sbjct: 35 FEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDFCT 94
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM----------------GLNNTNFSVVTWSD 104
ELTGI Q QVD+G+ L L + W+ ++ + + VTWSD
Sbjct: 95 ELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTWSD 154
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V L ECR K+++KP N WI+LR + + L A++ G+ + GR H
Sbjct: 155 WDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGREHS 214
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A+L S ++ G ITKSL
Sbjct: 215 GLDDSRNTAKLASRMICDGCVMKITKSL 242
>gi|395514593|ref|XP_003761499.1| PREDICTED: ERI1 exoribonuclease 2 [Sarcophilus harrisii]
Length = 685
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 132/223 (59%), Gaps = 23/223 (10%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y ++IDFE+TC D +R+ + QEIIEFP+V+++ ++GEI + FQTYV+P P+L+ F
Sbjct: 35 FDYLIIIDFESTCWNDGKRH-YSQEIIEFPAVLLNTLTGEIESEFQTYVQPEEHPVLSKF 93
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-----------LNNTNFSV-----VTW 102
C ELTGI+Q QVD G+ L L KW+ + +N+ V VTW
Sbjct: 94 CVELTGIKQAQVDEGVPLKICLSQFCKWIQVIQQQKKIIFAPSVRDNSASDVKLCAFVTW 153
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE ECR K+++KP + N W++LR + + L A++ G+ + GR
Sbjct: 154 SDWDLGVCLEYECRRKQLRKPVFLNSWVDLRATYKIFYRRKPKGLSGALQELGIEFSGRE 213
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL--TPQA--NPNCL 201
H GLDD+ N A L ++R G ITKSL P + +PNC+
Sbjct: 214 HSGLDDSRNTAHLAWRMIRDGCIMKITKSLDKVPHSAKSPNCV 256
>gi|383415517|gb|AFH30972.1| ERI1 exoribonuclease 2 isoform 1 [Macaca mulatta]
Length = 690
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 21/224 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT--PQANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL P N + L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKNSSILARN 256
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 596 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 641
>gi|355756611|gb|EHH60219.1| ERI1 exoribonuclease 2 [Macaca fascicularis]
Length = 690
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 21/224 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT--PQANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL P N + L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKNSSILARN 256
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 596 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 641
>gi|344294294|ref|XP_003418853.1| PREDICTED: ERI1 exoribonuclease 2 [Loxodonta africana]
Length = 684
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 125/224 (55%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+ +++ +GEI + F +V+P PLL++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAALLNTSTGEIESEFHAFVQPQEHPLLSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF----------------SVVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ F + VTWS
Sbjct: 94 MELTGIKQVQVDEGVPLKICLSQFCKWIHKIQQQKKIFFATEVLDPSSSKVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYKRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
GLDD+ N A L ++R G IT+SL + NPN L N
Sbjct: 214 SGLDDSRNTAHLAWKMIRDGCLMKITRSLNKVPTKRNPNILARN 257
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR C YF+W T
Sbjct: 590 CKCGRRSKRLVVSNNGPNHGKVFYCCPTGKYQENRKQ-CGYFKWEQT 635
>gi|402907864|ref|XP_003916681.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 2 [Papio
anubis]
Length = 690
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 21/224 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT--PQANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL P N + L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKNSSILARN 256
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 596 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 641
>gi|297283615|ref|XP_001084714.2| PREDICTED: ERI1 exoribonuclease 2-like [Macaca mulatta]
gi|355710023|gb|EHH31487.1| ERI1 exoribonuclease 2 [Macaca mulatta]
Length = 690
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 130/224 (58%), Gaps = 21/224 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT--PQANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL P N + L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKNSSILARN 256
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 596 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 641
>gi|242014471|ref|XP_002427913.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212512397|gb|EEB15175.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 386
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F YYVVIDFEATCD ++ + QEIIEFP+V+V+ +I CF+ Y +P P L+ +C
Sbjct: 102 FPYYVVIDFEATCDNKK-IDRQEIIEFPAVLVNSKKQKIEDCFRMYCKPRINPKLSQYCM 160
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQ--MGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q QVDN T + L ++ WL + +G N ++VVT +WD L S+C
Sbjct: 161 ELTGITQEQVDNAETFDKVLSHYNNWLKKHNLGTKNKRYAVVTDGNWDMSKFLVSQCHYS 220
Query: 119 KIQKPAYFNQWINLRVPFSKVF--GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P + W+NL+ F + G+ R LK +E+ + + GR HCGLDDA NIAR+L
Sbjct: 221 NVPIPKWGKTWVNLKKTFKNFYQKGENRICLKTMLEMLNMEFIGRPHCGLDDAKNIARIL 280
Query: 177 SVIMRRGFKFSITKSLT 193
++ G I + L
Sbjct: 281 LKMIYDGSNIQINERLA 297
>gi|431908545|gb|ELK12140.1| Exonuclease domain-containing protein 1 [Pteropus alecto]
Length = 529
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 128/224 (57%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC E H QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNEGKRHQSQEIIEFPAVLLNTSNGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G+++ + S VTWS
Sbjct: 94 MELTGIKQDQVDEGVPLKICLSQFCKWIHKIQQEKKITFATGISDLSTSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
GLDD+ N A L ++R G IT+ L + NPN L N
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCSMKITRCLNKVPTKKNPNILARN 257
>gi|195999854|ref|XP_002109795.1| hypothetical protein TRIADDRAFT_20827 [Trichoplax adhaerens]
gi|190587919|gb|EDV27961.1| hypothetical protein TRIADDRAFT_20827, partial [Trichoplax
adhaerens]
Length = 229
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 1 FEYYVVIDFEATCDKERN-LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F Y ++IDFEATC K+ + + EIIEFP+V+++ ++ +I A F YV+PT P L++FC
Sbjct: 3 FSYVIIIDFEATCWKDNSSRYSSEIIEFPAVLLNVLTQQIEAVFHQYVQPTINPKLSEFC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV------------------VT 101
K LTGI Q QVD+GI L L KWL ++ + N N + VT
Sbjct: 63 KTLTGITQKQVDDGIPLATCLVSFRKWLDEI-IKNKNIRLFNKNCRDAGHKNYYNCIFVT 121
Query: 102 WSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGR 161
WSDWD V L EC+ K+I+ P F QWI+LR + + +G L ++E GL + GR
Sbjct: 122 WSDWDIGVCLYYECKKKQIKLPTEFYQWIDLRALYKRFYGKKPTGLNGSMESVGLKFIGR 181
Query: 162 VHCGLDDAINIARLLSVIMRRGFKFSITKSLT 193
H GLDD+ N ARL S ++ G +TK +
Sbjct: 182 EHSGLDDSKNTARLCSKMVHDGCVLDVTKRIA 213
>gi|157116964|ref|XP_001652909.1| exonuclease [Aedes aegypti]
gi|108876231|gb|EAT40456.1| AAEL007801-PA [Aedes aegypti]
Length = 234
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 17/211 (8%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +VIDFEATC + + EIIEFP+V+++ +G+I + F+ +V P P L+D
Sbjct: 18 FQYLIVIDFEATCWPAEDAQKWKKNEIIEFPAVLLNLSNGQIESEFRQFVMPIENPRLSD 77
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF--------------SVVTWS 103
FC +LTGI+Q QV+NG+ L L D+WL + L + + TW+
Sbjct: 78 FCIQLTGIRQDQVENGVPLHTCLSLFDRWLKKNVLGDRGLILPKMAPSNPTGTVAFATWT 137
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD L EC KKI K YF+QWI++R + + + +A+ G+ ++GR H
Sbjct: 138 DWDLGSCLTKECTRKKINKAGYFDQWIDVRAIYKTFYQHNPKSFADALTTLGMRFEGRPH 197
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
G+DD+ NIAR+++ + R G F ITK L P
Sbjct: 198 SGMDDSKNIARVVAKMRREGANFIITKDLRP 228
>gi|327284033|ref|XP_003226743.1| PREDICTED: ERI1 exoribonuclease 2-like [Anolis carolinensis]
Length = 260
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y ++IDFE+TC + R + QEIIEFP+V+++ GEI + F YV+P PLL++FC
Sbjct: 35 FDYLIIIDFESTCWNDRRKCYSQEIIEFPAVLLNTSDGEIESEFHMYVQPQEHPLLSEFC 94
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGL-NNTNFS---------------VVTWS 103
ELTGI Q QVD+G+ L L KW+ ++ N F+ VTWS
Sbjct: 95 TELTGITQSQVDDGVPLHICLSQFSKWIQKIQKEKNIIFTSGHSSCAASEGKLCAFVTWS 154
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V L EC+ K+++KP N WI+LR + + LK A++ G+I+ GR H
Sbjct: 155 DWDLGVCLHYECKRKQLRKPDILNSWIDLRATYKVFYSRKPQGLKGALQDVGIIFAGREH 214
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G ITK+L
Sbjct: 215 SGLDDSRNTAHLAWRMIRDGCVMKITKTL 243
>gi|218505680|ref|NP_001136197.1| ERI1 exoribonuclease 2 isoform 1 [Homo sapiens]
gi|190359336|sp|A8K979.2|ERI2_HUMAN RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|119587241|gb|EAW66837.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_b [Homo sapiens]
Length = 691
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSL 242
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 642
>gi|332845430|ref|XP_003315043.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan troglodytes]
gi|410218774|gb|JAA06606.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410257124|gb|JAA16529.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410290502|gb|JAA23851.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
Length = 691
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSL 242
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 642
>gi|332224715|ref|XP_003261514.1| PREDICTED: ERI1 exoribonuclease 2 [Nomascus leucogenys]
Length = 689
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKSCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSL 242
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 595 CKCGRRSKRLVVSNNGPNHGKIFYCCPIGKYQENR-KCCGYFKWEQT 640
>gi|426381460|ref|XP_004057358.1| PREDICTED: ERI1 exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 691
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSL 242
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 597 CKCGRRSKRLVVSNNGPNHGKVFYCCPVGKYQENR-KCCGYFKWEQT 642
>gi|301784463|ref|XP_002927641.1| PREDICTED: ERI1 exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 679
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 19/210 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ QEIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-QSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM-------------GLNNTNFSV---VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ L N + VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LRV + +G L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPKGLSGALQEVGIEFLGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL 192
H GLDD+ N A L ++R G IT+SL
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 585 CKCGRRSKRLVVSNYGPNHGKVFYCCPVGKYQENR-KCCGYFKWEQT 630
>gi|281339701|gb|EFB15285.1| hypothetical protein PANDA_017444 [Ailuropoda melanoleuca]
Length = 672
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 19/210 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ QEIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 27 FDYLIVIDFESTCWNDGKRH-QSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEF 85
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM-------------GLNNTNFSV---VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ L N + VTW
Sbjct: 86 CMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAEVKLCAFVTW 145
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LRV + +G L A++ G+ + GR
Sbjct: 146 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPKGLSGALQEVGIEFLGRE 205
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL 192
H GLDD+ N A L ++R G IT+SL
Sbjct: 206 HSGLDDSRNTALLAWKMIRDGCLMKITRSL 235
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 578 CKCGRRSKRLVVSNYGPNHGKVFYCCPVGKYQENR-KCCGYFKWEQT 623
>gi|218505674|ref|NP_542394.2| ERI1 exoribonuclease 2 isoform 2 [Homo sapiens]
gi|119587240|gb|EAW66836.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_a [Homo sapiens]
Length = 328
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 25/237 (10%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQA--------NPNCLTWNRHHFLEPQ 212
GLDD+ N A L ++R G IT+SL N + + ++H FL+ +
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSLNKGPFLLPSWTWNSDLASGDQHAFLQQE 270
>gi|332845434|ref|XP_003315045.1| PREDICTED: ERI1 exoribonuclease 2 isoform 3 [Pan troglodytes]
gi|397481790|ref|XP_003812120.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 328
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 25/237 (10%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQA--------NPNCLTWNRHHFLEPQ 212
GLDD+ N A L ++R G IT+SL N + + ++H FL+ +
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSLNKGPFLLPSWTWNSDLASGDQHAFLQQE 270
>gi|14714721|gb|AAH10503.1| Exoribonuclease 2 [Homo sapiens]
gi|123996651|gb|ABM85927.1| exonuclease domain containing 1 [synthetic construct]
gi|123996653|gb|ABM85928.1| exonuclease domain containing 1 [synthetic construct]
gi|307684634|dbj|BAJ20357.1| ERI1 exoribonuclease family member 2 [synthetic construct]
Length = 328
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 25/237 (10%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQA--------NPNCLTWNRHHFLEPQ 212
GLDD+ N A L ++R G IT+SL N + + ++H FL+ +
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSLNKGPFLLPSWTWNSDLASGDQHAFLKQE 270
>gi|34534279|dbj|BAC86956.1| unnamed protein product [Homo sapiens]
Length = 279
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 135/246 (54%), Gaps = 34/246 (13%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP----------------QANPNC-LTWNRH 206
GLDD+ N A L ++R G IT+SL + NP+ + + H
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSLNKVVPKGIHAVPKLSHQQKNNPSLFMKKSLH 273
Query: 207 HFLEPQ 212
H + PQ
Sbjct: 274 HLIAPQ 279
>gi|345305381|ref|XP_001508438.2| PREDICTED: ERI1 exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 757
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 128/221 (57%), Gaps = 20/221 (9%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ + QEIIEFP+V+++ +GEI + FQ YV+P P+L++FC
Sbjct: 35 FDYLIVIDFESTCWNDGKHHYSQEIIEFPAVLLNTSTGEIESEFQCYVQPQEHPILSEFC 94
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ + G++N S VTWS
Sbjct: 95 IELTGIKQAQVDEGVPLKICLSQFCKWIQMIQQKKKIIFAPGISNPATSEVKSCAFVTWS 154
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K+++KP N WI+LR + + L A++ GL + G+ H
Sbjct: 155 DWDLGVCLEYECKRKQLRKPEILNSWIDLRATYKLFYMRKPKGLSGALQDLGLKFSGQEH 214
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLT---PQANPNCL 201
GLDD+ N A L ++ G ITKSL P+ N +CL
Sbjct: 215 SGLDDSRNTAHLAWRMIGDGCIMKITKSLNTVQPKKNSSCL 255
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 211 PQAMYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCG-NWTPNRGACCN 269
P+ TPP C CG ++ + V+ GP RG F+ C + G C+
Sbjct: 596 PRVRMTPP------------LCNCGRRAKRLVVSNNGPNRGRAFYSCPVGKSKGNGKSCS 643
Query: 270 YFQWATT 276
YF+W T
Sbjct: 644 YFKWEKT 650
>gi|332845432|ref|XP_003315044.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan troglodytes]
gi|397481788|ref|XP_003812119.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan paniscus]
Length = 279
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 135/246 (54%), Gaps = 34/246 (13%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP----------------QANPNC-LTWNRH 206
GLDD+ N A L ++R G IT+SL + NP+ + + H
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCVMKITRSLNKVVPKGIHAVPKLSHQQKNNPSLFMKKSLH 273
Query: 207 HFLEPQ 212
H + PQ
Sbjct: 274 HLIAPQ 279
>gi|351710291|gb|EHB13210.1| Exonuclease domain-containing protein 1, partial [Heterocephalus
glaber]
Length = 684
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 130/223 (58%), Gaps = 19/223 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +VIDFE+TC + ++ + QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 29 YDYLIVIDFESTCWNDGKHHNNQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSEFC 88
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q Q+D G+ L L KW+ ++ G+++ + S VTWS
Sbjct: 89 MELTGIKQAQIDEGVPLKICLSQFCKWIHKIQQEKKIVFTPGVSDPSTSEVKLCAFVTWS 148
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 149 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREH 208
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL--TPQANPNCLTWN 204
GLDD+ N A L ++R G IT+ L P+ NP+ L N
Sbjct: 209 SGLDDSRNTALLAWKMIRDGCLMKITRCLKQVPKKNPSLLARN 251
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR C+YF+W T
Sbjct: 590 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKR-CDYFKWEQT 635
>gi|403277084|ref|XP_003930207.1| PREDICTED: ERI1 exoribonuclease 2 [Saimiri boliviensis boliviensis]
Length = 690
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 125/210 (59%), Gaps = 19/210 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + F YV+P +P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFHAYVQPQEQPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKKIIFAAGVSEPSTSEVNLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRSTYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL 192
H GLDD+ N A L ++R G IT+SL
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSL 242
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 596 CKCGRRSRRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFRWEQT 641
>gi|432119658|gb|ELK38559.1| ERI1 exoribonuclease 2 [Myotis davidii]
Length = 698
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 129/224 (57%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC +E H QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 47 FDYLIVIDFESTCWEEGKRHRTQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFC 106
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G+++ S VTWS
Sbjct: 107 MELTGIKQAQVDEGVPLKICLSQFCKWIQKVQQQKKIIFATGVSDLPTSEVKLCAFVTWS 166
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR H
Sbjct: 167 DWDLGVCLEYECKRKQLFKPVFLNAWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGREH 226
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKS---LTPQANPNCLTWN 204
GLDD+ N A L ++R G IT+S + + NPN L N
Sbjct: 227 SGLDDSRNTALLAWKMIRDGCLMKITRSWNKVHTKKNPNILGRN 270
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 604 CRCGRRSKRLVVSNNGPNHGRVFYCCPIGKYQENRN-CCGYFKWEQT 649
>gi|390366041|ref|XP_790825.3| PREDICTED: ERI1 exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 631
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 15/216 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +VIDFE+TC K++ QEIIEFP+V+++ +G++ + FQ YV P P+L+DFC
Sbjct: 35 FSYLIVIDFESTCWKDKKNTSQEIIEFPAVLLNTTTGQLESEFQQYVMPDEHPVLSDFCT 94
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQ------MGLNNTNFSV------VTWSDWDCQ 108
ELTGI Q QV+NG+ L L WL + + N + VTWSDWD
Sbjct: 95 ELTGISQEQVENGVPLFICLNKFTSWLKKIESEKNLAYNRSTDDTRKLCTFVTWSDWDLS 154
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
V L EC+ K++ KP+ N WI+ R + + L A++ G+ + GR H GLDD
Sbjct: 155 VCLRYECQRKQLYKPSALNHWIDARAVYRNFYQRKPKGLSGALQEVGIEFAGRQHSGLDD 214
Query: 169 AINIARLLSVIMRRGFKFSITKSL---TPQANPNCL 201
A N A L+ +++ G F ITK++ T +A P+ L
Sbjct: 215 AKNTAILVWRMIQDGCHFKITKTIQSGTLKAIPSAL 250
>gi|302844761|ref|XP_002953920.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
gi|300260732|gb|EFJ44949.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
Length = 201
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 3/192 (1%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+ ++V+D EATC K R+L+P EIIE ++++ S + FQ++VRPT PLL FC E
Sbjct: 1 DLFLVLDLEATCTKCRSLYPIEIIEVSALLLDAHSLATLGEFQSHVRPTEHPLLDPFCVE 60
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV--VTWSDWDCQVMLESECRIKK 119
LTGI+Q QVD LG+ L +WL +G S+ VTW+DWD ++ LE+EC ++
Sbjct: 61 LTGIEQEQVDTAPLLGDVLLRFQQWLEGLGAFGGAKSLLPVTWTDWDLKICLETECGWRQ 120
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +P Y +W NL+ + + +L++ VE GL WQGR H GLDD+ N A L +
Sbjct: 121 LPRPPYLRRWCNLKRVYGARYRRA-SSLQKCVEALGLRWQGRAHNGLDDSRNTAMLAVRM 179
Query: 180 MRRGFKFSITKS 191
+R G ++T S
Sbjct: 180 VRDGCVLTVTDS 191
>gi|354499797|ref|XP_003511992.1| PREDICTED: ERI1 exoribonuclease 2 [Cricetulus griseus]
Length = 687
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 123/223 (55%), Gaps = 19/223 (8%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +VIDFE+TC K+ H EIIEFP+V++S +GEI + F YV+P P+L++FC
Sbjct: 34 YDYLIVIDFESTCWKDGKHHNSPEIIEFPAVLLSTATGEIESEFHAYVQPQEHPVLSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWL----------LQMGLNNTNFSV-----VTWSD 104
ELTGI+Q QVD G+ L L KW+ L G + V VTWSD
Sbjct: 94 TELTGIKQVQVDEGVPLKICLSQFCKWIHKIQQQKKIILATGDLEPSTEVKLCAFVTWSD 153
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V LE ECR K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 WDLGVCLEYECRRKQLLKPVFLNSWIDLRATYKLFYKRKPKGLSGALQEVGIEFSGREHS 213
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 214 GLDDSRNTALLAWKMIRDGCLMKITRSLNKVLTKKNPKILVKN 256
>gi|221132558|ref|XP_002167097.1| PREDICTED: 3'-5' exoribonuclease 1-like [Hydra magnipapillata]
Length = 287
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 1/192 (0%)
Query: 2 EYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+YYVVIDFEATCD+ + EIIEFP+V+V + EI++ F +Y RP P+L++FCK
Sbjct: 95 DYYVVIDFEATCDEPNPSGFQHEIIEFPAVLVKTSTLEIVSEFHSYCRPVINPVLSEFCK 154
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI Q QV++ L DKWL Q + F + T WD L+++C+ I
Sbjct: 155 SLTGITQVQVESSSVFEVVLQRFDKWLKQQVMPTETFCIATDGPWDLDRFLKNQCKTLNI 214
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
Q P YF++W+N+R F + + N++ ++ G+ ++GR H G+DDA NIAR+L ++
Sbjct: 215 QIPHYFHRWVNIRKHFYNYYKINQANVELMLQHLGMEFEGRPHRGIDDARNIARILIQLI 274
Query: 181 RRGFKFSITKSL 192
R G I +SL
Sbjct: 275 RDGADPLINESL 286
>gi|338712792|ref|XP_003362770.1| PREDICTED: ERI1 exoribonuclease 2 [Equus caballus]
Length = 689
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 125/224 (55%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKW----------LLQMGLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW G+ + + S VTWS
Sbjct: 94 VELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKITFASGVADLSTSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ GL + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYKRKPKGLSGALQEVGLEFLGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
GLDD+ N A L ++R G IT+ L + NPN L N
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCFMKITRPLKKVPTKKNPNILARN 257
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG + + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 595 CKCGRRCKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 640
>gi|296219709|ref|XP_002756006.1| PREDICTED: ERI1 exoribonuclease 2 [Callithrix jacchus]
Length = 687
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 19/210 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ H QEIIEFP+V+++ +G+I + F YV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-HSQEIIEFPAVLLNTSTGQIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFAAGVSEPSTSEVNLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSL 192
H GLDD+ N A L +++ G IT+SL
Sbjct: 213 HSGLDDSRNTALLAWKMIKDGCLMKITRSL 242
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 593 CKCGRRSRRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFEWEQT 638
>gi|427781641|gb|JAA56272.1| Putative eri1 exoribonuclease 3 [Rhipicephalus pulchellus]
Length = 256
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y++++DFEATC E+ + PQEIIEFP + V+G + E + F TYV+P P LT FC
Sbjct: 69 YDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQAHPQLTAFC 128
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGI Q VD+ L E L D W+ + GL +T+ DWD Q ML S+C
Sbjct: 129 TELTGIVQDMVDDQPHLQEVLSRFDDWMREQGLLQARTVFITFGDWDLQKMLPSQCAYLG 188
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
I P Y +WINL+ F++ G L +A+ L GR H G+DD N+ +L++ +
Sbjct: 189 IPVPPYMTRWINLKRAFAECTGHWPKTLLDALRFCRLPHLGRHHSGIDDCRNLTQLVAWL 248
Query: 180 MRRGFKFS 187
RG++F+
Sbjct: 249 ASRGYQFA 256
>gi|158253677|gb|AAI54112.1| LOC100127672 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F TYV+P P LT FC
Sbjct: 78 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQLTPFCT 136
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD TL + L D+W+ + GL + + VT DWD ++ML +C
Sbjct: 137 ELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLPGQCEYL 196
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+Q YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 197 GLQVADYFKQWINLKKAYSFAIGTWPKNGLLDMNKGMSLQHIGRPHSGIDDCRNIANIMK 256
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 257 TLAHRGFIFKQT 268
>gi|410985044|ref|XP_003998835.1| PREDICTED: ERI1 exoribonuclease 2 [Felis catus]
Length = 685
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 128/225 (56%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y +VIDFE+TC D +R+ QEIIEFP+V++S +GEI + F TYV+P P+L++F
Sbjct: 34 FDYLIVIDFESTCWNDGKRH-QSQEIIEFPAVLLSTSTGEIESEFHTYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEAL----------YFHDKWLLQMGLNNTNFS------VVTW 102
C ELTGI+Q QVD G+ L L K + G+++ + S VTW
Sbjct: 93 CMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNPKILARN 257
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G FF C G + NR CC YF+W T
Sbjct: 591 CKCGRRSKRLVVSNNGPNHGKVFFCCPNGKYQENR-KCCGYFKWEQT 636
>gi|26325030|dbj|BAC26269.1| unnamed protein product [Mus musculus]
Length = 688
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 125/225 (55%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ T +F+ VTW
Sbjct: 93 CTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE ECR K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRNGCLMKITRSLNKVLTKKNPKILARN 257
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + +R CC YF+W T
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDR-KCCGYFKWEQT 639
>gi|146327084|gb|AAI41731.1| LOC100049744 protein [Xenopus laevis]
Length = 273
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F TYV+P P LT FC
Sbjct: 79 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQLTPFCT 137
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD TL + L D+W+ + GL + + VT DWD ++ML +C
Sbjct: 138 ELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLPGQCEYL 197
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+Q YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 198 GLQVADYFKQWINLKKAYSFAIGTWPKNGLLDMNKGMSLQHIGRPHSGIDDCRNIANIMK 257
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 258 TLAHRGFIFKQT 269
>gi|166998659|ref|NP_001107798.1| Snipper [Tribolium castaneum]
gi|156447793|gb|ABU63675.1| Snipper [Tribolium castaneum]
Length = 232
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 113/206 (54%), Gaps = 18/206 (8%)
Query: 1 FEYYVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F+Y +V+DFEATC D +N P EIIEFP V+ + +IIA FQ YV P P L+
Sbjct: 28 FDYLLVLDFEATCWSNGDPRKN--PAEIIEFPVVLYDVKNAKIIAEFQQYVMPVENPKLS 85
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNF-----------SVVTWSD 104
DFC ELTGIQQHQVDNG+ L L +W+ + M L + +F + TWSD
Sbjct: 86 DFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMSLYDMDFPNGESQATKTCAFATWSD 145
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD L EC K I+ + +WI++R F + L A+ GL ++G HC
Sbjct: 146 WDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYIRRPFIGLAGALAELGLTFEGTEHC 205
Query: 165 GLDDAINIARLLSVIMRRGFKFSITK 190
GL DA N ARL+ ++ +G +T+
Sbjct: 206 GLHDARNTARLVGKMVDKGVVLQLTR 231
>gi|405971378|gb|EKC36217.1| Exonuclease domain-containing protein 1, partial [Crassostrea
gigas]
Length = 590
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 14/206 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +++D+E+TC +++ QEIIEFP+V+++ ++G + + F YV P +P+L+DFCK
Sbjct: 31 FSYLIILDYESTCWEQKKFQTQEIIEFPAVLLNTLTGVVESEFHYYVMPEEQPMLSDFCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM----GL-------NNTNFS---VVTWSDWD 106
+LTGI Q QVDNGI L L WL ++ GL ++T S VTWSDWD
Sbjct: 91 QLTGITQEQVDNGIPLRLCLRKFSHWLDKLQREKGLVFDPPSEDSTEASYTTFVTWSDWD 150
Query: 107 CQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGL 166
L +EC+ K++ KP+ N WI+LR + K + L A++ G+ ++GR H G+
Sbjct: 151 LGTCLLNECKRKQLLKPSQLNNWIDLRATYRKFYDRKPNGLNGALQDLGIEFEGREHSGI 210
Query: 167 DDAINIARLLSVIMRRGFKFSITKSL 192
DA N A L +M G ITKSL
Sbjct: 211 VDARNTATLAYRMMCDGCVMKITKSL 236
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQW 273
C CG +S ++++Q PGP G FFF C C +F+W
Sbjct: 488 CKCGRRSKRRMVQSPGPNLGRFFFSCSGVKSIDRNGCGFFKW 529
>gi|308492914|ref|XP_003108647.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
gi|308248387|gb|EFO92339.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
Length = 280
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 117/217 (53%), Gaps = 8/217 (3%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
FEY +++DFEATC + L QEIIEFP V +S + I F YVRPT P LT
Sbjct: 63 FEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTESPKLTS 122
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL L DKWL + L N NF+ VT DWD +V L +E +
Sbjct: 123 FCTSLTGIIQEMVDEKPTLSGVLEEFDKWLKEDSRLENNNFAFVTCGDWDLKVALPNEAK 182
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I P YF+QWIN++ +++ D + + +++ L QGR H G+DD NI ++
Sbjct: 183 FKNIPIPDYFHQWINVKKAYAEHTNDFARGMMQLLKIYKLQHQGRHHSGIDDVANICEVV 242
Query: 177 SVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQA 213
+ + G + IT + P+ + NR F E A
Sbjct: 243 RCLGKDGHNYRITSN----DQPSTTSSNRRRFREAVA 275
>gi|61098180|ref|NP_081974.3| ERI1 exoribonuclease 2 [Mus musculus]
gi|81888440|sp|Q5BKS4.1|ERI2_MOUSE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|60688299|gb|AAH90961.1| Exonuclease domain containing 1 [Mus musculus]
gi|74138480|dbj|BAE38055.1| unnamed protein product [Mus musculus]
gi|74189274|dbj|BAE22676.1| unnamed protein product [Mus musculus]
Length = 688
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 125/225 (55%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ T +F+ VTW
Sbjct: 93 CTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE ECR K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVLTKKNPKILARN 257
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + +R CC YF+W T
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDR-KCCGYFKWEQT 639
>gi|74141341|dbj|BAE35962.1| unnamed protein product [Mus musculus]
Length = 636
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 125/225 (55%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ T +F+ VTW
Sbjct: 93 CTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE ECR K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVLTKKNPKILARN 257
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQW 273
C CG +S + ++ GP G F+ C G + +R CC YF+W
Sbjct: 594 CKCGRRSKRLIVSNNGPNHGKAFYCCPVGKYQQDR-KCCGYFKW 636
>gi|270002199|gb|EEZ98646.1| hypothetical protein TcasGA2_TC001174 [Tribolium castaneum]
Length = 232
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 113/206 (54%), Gaps = 18/206 (8%)
Query: 1 FEYYVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F+Y +V+DFEATC D +N P EIIEFP V+ + +IIA FQ YV P P L+
Sbjct: 28 FDYLLVLDFEATCWSNGDPRKN--PAEIIEFPVVLYDVKNAKIIAEFQQYVMPVENPKLS 85
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNF-----------SVVTWSD 104
DFC ELTGIQQHQVDNG+ L L +W+ + M L + +F + TWSD
Sbjct: 86 DFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMRLYDMDFPNGESQAAKTCAFATWSD 145
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD L EC K I+ + +WI++R F + L A+ GL ++G HC
Sbjct: 146 WDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYIRRPFIGLSGALAELGLTFEGTEHC 205
Query: 165 GLDDAINIARLLSVIMRRGFKFSITK 190
GL DA N ARL+ ++ +G +T+
Sbjct: 206 GLHDARNTARLVGKMVDKGVVLQLTR 231
>gi|321477963|gb|EFX88921.1| hypothetical protein DAPPUDRAFT_311056 [Daphnia pulex]
Length = 349
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCD--KERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F++YV+ID+EATC+ K N QEIIEFP+V+++ GE+ F++Y RP PLLT+F
Sbjct: 113 FDFYVIIDYEATCELLKHSNFK-QEIIEFPAVLLNCQKGEVEDEFRSYCRPVLNPLLTEF 171
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRI 117
C ELTGI Q VD E L ++WL + L + +F++VT WD L+++C +
Sbjct: 172 CTELTGITQDDVDKAPLFHEVLTSFEEWLQKKKLGSKYSFAIVTDGPWDIGYFLKNQCAL 231
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
KI+ P Y WIN+R F+ + + L ++L G +QGR H GLDDA NIA ++
Sbjct: 232 SKIEFPTYCKYWINIRKTFANFYNTGKMPLSTMIQLIGREFQGRAHSGLDDARNIAFIVQ 291
Query: 178 VIMRRGFKFSITKSLT 193
+++ G + + L
Sbjct: 292 RLVKDGARVVFNEKLA 307
>gi|387913954|gb|AFK10586.1| prion protein interacting protein [Callorhinchus milii]
Length = 276
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 109/194 (56%), Gaps = 4/194 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ ++V+DFEA CDKE + PQEIIEFP V + G + EI + F TYV+P P LT FC
Sbjct: 82 YHNFLVLDFEAACDKEL-IKPQEIIEFPVVRLHGRTLEIQSVFHTYVQPEAHPQLTPFCT 140
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD TL AL D+W+ GL N N VT DWD + ML +C+
Sbjct: 141 ELTGIVQSMVDGQPTLQRALQMVDEWMKNEGLLDPNVNSIFVTCGDWDLRKMLPGQCQYL 200
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K+ P YF +WINL+ + + L VE L GR+H G+DD NIA ++
Sbjct: 201 KLPVPDYFKKWINLKKAYGTAMETYPKSGLPCMVEGLALSHIGRLHSGIDDCKNIANIMK 260
Query: 178 VIMRRGFKFSITKS 191
+ R+GF F T S
Sbjct: 261 ELARKGFIFKETGS 274
>gi|391342996|ref|XP_003745801.1| PREDICTED: ERI1 exoribonuclease 3-like [Metaseiulus occidentalis]
Length = 245
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 109/196 (55%), Gaps = 2/196 (1%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F ++V+DFEATC++ PQEIIEFP + +S + E ++ F TYVRP P L+DFC
Sbjct: 49 FSNFLVMDFEATCNRAGPKPFPQEIIEFPVLNLSADTFEEVSRFHTYVRPDVHPELSDFC 108
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGI Q V++ L E L +KWL GLN N VT+ +WD L+ +C
Sbjct: 109 TELTGIMQSMVEDQPNLEETLKLFEKWLEDNGLNTENSIPVTFGNWDLATALKRQCSYLG 168
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
I P QWIN++ P + L +E AGL +QGR H G+DD NIA+LL +
Sbjct: 169 IDVPPILQQWINIKYPIFYFWRSWPRGLSHCLEKAGLEFQGRAHSGIDDCTNIAQLLKYL 228
Query: 180 MRRGFKFSIT-KSLTP 194
R F T K ++P
Sbjct: 229 GERNMIFKPTNKGMSP 244
>gi|300798138|ref|NP_001178043.1| ERI1 exoribonuclease 2 [Rattus norvegicus]
Length = 687
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 125/225 (55%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 YDYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTW 102
C ELTGI+Q QVD G+ L L KW+ ++ +F+ VTW
Sbjct: 93 CTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQKKISFATGDSEPSTPEVKPCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYNRKPKGLSGALQEVGIEFSGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTP---QANPNCLTWN 204
H GLDD+ N A L ++R G IT+SL + NP L N
Sbjct: 213 HSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVLTKKNPKILARN 257
>gi|194771098|ref|XP_001967613.1| GF13954 [Drosophila ananassae]
gi|190622727|gb|EDV38251.1| GF13954 [Drosophila ananassae]
Length = 282
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 122/220 (55%), Gaps = 20/220 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y + +DFEATC E+ PQ EIIE P+V+V+ +G+I A F Y+ P P L+
Sbjct: 63 YTYVIAVDFEATC-WEKQAPPQWREAEIIECPAVLVNLKTGKIEAEFHKYIMPIESPRLS 121
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNT----NFSVVTWS 103
+C ELTG QQ D + L AL +WL + +N + N + VTW+
Sbjct: 122 TYCTELTGFQQKTGDGEVPLQTALMMFHEWLRKELRARNLTLPKMNKSDVLGNCAFVTWT 181
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD + L EC K+++K +YFNQWI++R + CN +A+ GL ++GR H
Sbjct: 182 DWDFGICLAKECTRKRMRKASYFNQWIDVRAINRSWYKYRPCNFSDALSHVGLAFEGRAH 241
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTP--QANPNCL 201
G+DDA N+ L+ ++ G FSITK LTP Q N NC+
Sbjct: 242 WGIDDAKNLGALMCKMVIDGALFSITKDLTPYQQLNANCV 281
>gi|426254403|ref|XP_004020868.1| PREDICTED: ERI1 exoribonuclease 2 [Ovis aries]
Length = 689
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y ++IDFE+TC + ++ QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 34 FDYLIIIDFESTCWNDGKHHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSV---------------VTWS 103
ELTGI+Q QVD G+ L L F F+ VTWS
Sbjct: 94 MELTGIRQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTISDISTSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL---TPQANPNCLTWN 204
GLDD+ N A L ++R G IT+SL + + NPN T N
Sbjct: 214 FGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRNPNIFTRN 257
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + + GP G F+ C G + R CC YF+W T
Sbjct: 595 CKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKR-KCCGYFKWEQT 640
>gi|403291855|ref|XP_003936978.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 314
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 120 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 178
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 179 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 238
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 239 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 295
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 296 IMKTLAYRGFIFKQT 310
>gi|308452945|ref|XP_003089242.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
gi|308241498|gb|EFO85450.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
Length = 264
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 117/217 (53%), Gaps = 8/217 (3%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
FEY +++DFEATC + L QEIIEFP V +S + I F YVRPT LT
Sbjct: 47 FEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTESSKLTS 106
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL + L +KWL + L N NF+ VT DWD +V L +E +
Sbjct: 107 FCTSLTGIIQEMVDEKPTLSDVLEEFNKWLKEDSRLENNNFAFVTCGDWDLKVALPNEAK 166
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I P YF+QWIN++ +++ D + + +++ L QGR H G+DD NI ++
Sbjct: 167 FKNIPIPDYFHQWINVKKAYAEHTNDFARGMMQLLKIYKLQHQGRHHSGIDDVANICEVV 226
Query: 177 SVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQA 213
+ + G + IT + P+ + NR F E A
Sbjct: 227 RCLGKDGHNYRITSN----DQPSTTSSNRRRFREAVA 259
>gi|441634258|ref|XP_004089825.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Nomascus leucogenys]
Length = 314
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 120 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 178
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 179 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 238
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 239 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 295
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 296 IMKTLAYRGFIFKQT 310
>gi|164420717|ref|NP_001106713.1| ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|166989902|sp|A6QLH5.1|ERI3_BOVIN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|151556386|gb|AAI47968.1| ERI3 protein [Bos taurus]
gi|296488926|tpg|DAA31039.1| TPA: ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|440907277|gb|ELR57437.1| ERI1 exoribonuclease 3 [Bos grunniens mutus]
Length = 337
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|291399043|ref|XP_002715197.1| PREDICTED: prion protein interacting protein [Oryctolagus
cuniculus]
Length = 337
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|351696855|gb|EHA99773.1| Prion protein-interacting protein [Heterocephalus glaber]
Length = 337
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|348552232|ref|XP_003461932.1| PREDICTED: ERI1 exoribonuclease 3-like [Cavia porcellus]
Length = 337
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|297278520|ref|XP_001093178.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Macaca mulatta]
Length = 335
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 141 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 199
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 200 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 259
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 260 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 316
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 317 IMKTLAYRGFIFKQTS 332
>gi|149693719|ref|XP_001497227.1| PREDICTED: ERI1 exoribonuclease 3 [Equus caballus]
Length = 337
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|410032833|ref|XP_003949440.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Pan troglodytes]
Length = 314
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 120 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 178
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 179 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 238
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 239 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 295
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 296 IMKTLAYRGFIFKQT 310
>gi|390465848|ref|XP_002750780.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Callithrix jacchus]
Length = 337
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|74136559|ref|NP_076971.1| ERI1 exoribonuclease 3 [Homo sapiens]
gi|332259224|ref|XP_003278687.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Nomascus leucogenys]
gi|332808745|ref|XP_513102.3| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Pan troglodytes]
gi|426329367|ref|XP_004025712.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Gorilla gorilla
gorilla]
gi|172045564|sp|O43414.2|ERI3_HUMAN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|158254566|dbj|BAF83256.1| unnamed protein product [Homo sapiens]
gi|162319286|gb|AAI56813.1| Exoribonuclease 3 [synthetic construct]
gi|261860912|dbj|BAI46978.1| exoribonuclease 3 [synthetic construct]
gi|380816434|gb|AFE80091.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|384949372|gb|AFI38291.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|410207994|gb|JAA01216.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410250276|gb|JAA13105.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410290452|gb|JAA23826.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333785|gb|JAA35839.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333787|gb|JAA35840.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333789|gb|JAA35841.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
Length = 337
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|397483348|ref|XP_003812865.1| PREDICTED: ERI1 exoribonuclease 3 [Pan paniscus]
Length = 314
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 120 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 178
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 179 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 238
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 239 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 295
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 296 IMKTLAYRGFIFKQT 310
>gi|344287723|ref|XP_003415602.1| PREDICTED: ERI1 exoribonuclease 3 [Loxodonta africana]
Length = 337
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|395857747|ref|XP_003801246.1| PREDICTED: ERI1 exoribonuclease 3 [Otolemur garnettii]
Length = 337
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPIADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|431910041|gb|ELK13128.1| Prion protein-interacting protein [Pteropus alecto]
Length = 337
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|2852640|gb|AAC19158.1| unknown [Homo sapiens]
Length = 397
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 203 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 261
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 262 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 321
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 322 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 378
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 379 IMKTLAYRGFIFKQTS 394
>gi|12855883|dbj|BAB30489.1| unnamed protein product [Mus musculus]
Length = 274
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 118/209 (56%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ Y +V+DFE+TC + H EIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSV---------------VTWS 103
ELTGI+Q QVD G+ L L KW+ ++ T +F+ VTWS
Sbjct: 94 TELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE ECR K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 154 DWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGREH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTALLAWKMIRDGCLMKITRSL 242
>gi|33859765|ref|NP_536717.2| ERI1 exoribonuclease 3 [Mus musculus]
gi|81913994|sp|Q8C460.1|ERI3_MOUSE RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|26350187|dbj|BAC38733.1| unnamed protein product [Mus musculus]
gi|74184336|dbj|BAE25703.1| unnamed protein product [Mus musculus]
gi|109733321|gb|AAI16686.1| Exoribonuclease 3 [Mus musculus]
Length = 337
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|293347578|ref|XP_001071982.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
gi|392348242|ref|XP_233435.5| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|149035532|gb|EDL90213.1| similar to prion protein interacting protein 1, isoform CRA_a
[Rattus norvegicus]
Length = 337
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + RGF F T
Sbjct: 319 IMKTLAYRGFIFKQTS 334
>gi|426215380|ref|XP_004001950.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Ovis aries]
Length = 259
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 183
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 184 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 240
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 241 IMKTLAYRGFIFKQT 255
>gi|297278522|ref|XP_002801563.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Macaca mulatta]
gi|390465850|ref|XP_003733476.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Callithrix jacchus]
gi|390465852|ref|XP_003733477.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Callithrix jacchus]
gi|403291851|ref|XP_003936976.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403291853|ref|XP_003936977.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403291857|ref|XP_003936979.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426329369|ref|XP_004025713.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Gorilla gorilla
gorilla]
gi|119627449|gb|EAX07044.1| prion protein interacting protein, isoform CRA_c [Homo sapiens]
gi|194387402|dbj|BAG60065.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 183
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 184 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 240
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 241 IMKTLAYRGFIFKQT 255
>gi|156372383|ref|XP_001629017.1| predicted protein [Nematostella vectensis]
gi|156216008|gb|EDO36954.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 22/213 (10%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y VVIDFE+TC +K RN P EIIEFP+VVVS +GEI++ F+ +V PT L++F
Sbjct: 5 FDYLVVIDFESTCWKEKRRNSAP-EIIEFPAVVVSTSTGEIVSEFRQFVSPTEHSRLSEF 63
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMG------------------LNNTNFSV- 99
C +LTGI Q QVD GI +G L +WL ++ ++ +++
Sbjct: 64 CTKLTGITQDQVDAGIPIGACLVLFSRWLKELQQLKGIRFMSDITRPNGRPIDQAKWAMS 123
Query: 100 VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQ 159
VTWSDWD + L++EC K+ P WI+L+ + K + L A++ G+ +
Sbjct: 124 VTWSDWDIGICLKNECLRKRHLVPPELRSWIDLKATYKKFYSRKPDGLAGALKDLGIRFD 183
Query: 160 GRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
GR H GLDDA N A L ++R G S+T SL
Sbjct: 184 GREHSGLDDARNTAALAWRMVRDGCVISVTSSL 216
>gi|449508749|ref|XP_002190758.2| PREDICTED: ERI1 exoribonuclease 3 [Taeniopygia guttata]
Length = 278
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 84 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 142
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + + VT DWD +VML +C+
Sbjct: 143 ELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPGQCQYL 202
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 203 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMK 262
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 263 TLAHRGFIFKQT 274
>gi|187469812|gb|AAI67080.1| Unknown (protein for IMAGE:8363520) [Rattus norvegicus]
Length = 292
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 98 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 156
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 157 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 216
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 217 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 273
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 274 IMKTLAYRGFIFKQT 288
>gi|109730985|gb|AAI17541.1| Eri3 protein [Mus musculus]
Length = 296
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 102 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 160
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 161 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 220
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 221 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 277
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 278 IMKTLAYRGFIFKQT 292
>gi|449266425|gb|EMC77478.1| Prion protein-interacting protein [Columba livia]
Length = 274
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 80 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 138
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + + VT DWD +VML +C+
Sbjct: 139 ELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPGQCQYL 198
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 199 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMK 258
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 259 TLAHRGFIFKQT 270
>gi|392340620|ref|XP_003754131.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|392348244|ref|XP_003750052.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
Length = 296
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 102 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 160
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 161 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 220
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 221 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 277
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 278 IMKTLAYRGFIFKQT 292
>gi|148698603|gb|EDL30550.1| prion protein interacting protein 1, isoform CRA_a [Mus musculus]
Length = 259
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 183
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 184 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 240
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 241 IMKTLAYRGFIFKQT 255
>gi|118094519|ref|XP_422418.2| PREDICTED: ERI1 exoribonuclease 3 [Gallus gallus]
Length = 265
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 111/192 (57%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 71 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 129
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + + VT DWD +VML +C+
Sbjct: 130 ELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPGQCQYL 189
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 190 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMK 249
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 250 TLAHRGFIFKQT 261
>gi|28174986|gb|AAH21405.2| Eri3 protein [Mus musculus]
Length = 264
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 70 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 128
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 129 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 188
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 189 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 245
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 246 IMKTLAYRGFIFKQT 260
>gi|198477158|ref|XP_002136734.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
gi|198145039|gb|EDY71751.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P +P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ + + K + + A+E L +QGR H
Sbjct: 124 WDFGICLAKECARKNIRKPTCFNQWIDAKAIYQKWYKYRPFSFNNALEHVRLTFQGRAHS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G FSITK LTP N
Sbjct: 184 GIDDAKNLGSLICKMFRDGAPFSITKDLTPHKELN 218
>gi|195162333|ref|XP_002022010.1| GL14415 [Drosophila persimilis]
gi|194103908|gb|EDW25951.1| GL14415 [Drosophila persimilis]
Length = 223
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ + + K + N +A+ L +QGR H
Sbjct: 124 WDFETCLAKECARKNIRKPTCFNQWIDAKAIYKKWYKYHPFNFGKALAHVRLTFQGRAHS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G SITK LTPQ N
Sbjct: 184 GIDDAKNLGNLICKMFREGAPLSITKDLTPQEELN 218
>gi|307776322|pdb|2XRI|A Chain A, Crystal Structure Of Human Eri1 Exoribonuclease 3
Length = 224
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 30 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 88
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 89 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 148
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 149 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 205
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 206 IMKTLAYRGFIFKQT 220
>gi|119627448|gb|EAX07043.1| prion protein interacting protein, isoform CRA_b [Homo sapiens]
Length = 206
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 12 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 70
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 71 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 130
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 131 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 187
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 188 IMKTLAYRGFIFKQT 202
>gi|307169180|gb|EFN61996.1| Prion protein-interacting protein [Camponotus floridanus]
Length = 236
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FEY +V+DFEATCDK+ L PQEIIE P V +S ++ F Y+RP P LT FC
Sbjct: 24 FEYLLVMDFEATCDKQVTLQPQEIIELPCVALSTSDWKLKDTFHAYIRPRVYPKLTPFCI 83
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD+ + KWL++ G + S VT +WD + ML ++C +
Sbjct: 84 ELTGIMQEMVDDQPCFADVFSKFRKWLIEGGYFDRSDKSSFVTCGNWDLKTMLPNQCNLD 143
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F QWI L+ F G +LK+ + L QGR+H G+DD N+ ++
Sbjct: 144 NITLPDEFKQWIELKHTFCDSTGYYPRSLKDMLTRLDLSMQGRLHSGIDDVKNMVSIIQA 203
Query: 179 IMRR-GFKFSITKSLTPQA 196
+ R +F IT SLT A
Sbjct: 204 LKERYNTQFKITSSLTNSA 222
>gi|156405487|ref|XP_001640763.1| predicted protein [Nematostella vectensis]
gi|156227899|gb|EDO48700.1| predicted protein [Nematostella vectensis]
Length = 277
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
YY VIDFEATC+KE + EIIEFP+V+V+ + EI FQ Y +P +P LT FC+E
Sbjct: 87 YYCVIDFEATCEKENPEGYQHEIIEFPAVLVNAKTLEIEGEFQQYCKPLLKPRLTKFCQE 146
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-FSVVTWSDWDCQVMLESECRIKKI 120
LTGI Q VD + L WL + G+ T+ F+VVT WD Q L ++C I I
Sbjct: 147 LTGISQETVDKSDNFPQVLDNFHIWLKERGIGTTHKFAVVTDGPWDIQRFLVTQCEICNI 206
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P + ++INLR + + F ++C L E +E GL ++GR H GLDD+ NIAR+L ++
Sbjct: 207 NLPKWSRKYINLRKHY-RNFYKMKCKLSEMLENLGLEFEGRPHSGLDDSRNIARILIKML 265
Query: 181 RRGFKFS 187
+ G S
Sbjct: 266 KDGGDLS 272
>gi|387015834|gb|AFJ50036.1| ERI1 exoribonuclease 3-like [Crotalus adamanteus]
Length = 257
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 63 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 121
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + VT DWD +VML +C+
Sbjct: 122 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPTVKSIFVTCGDWDLKVMLPGQCQYL 181
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 182 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMK 241
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 242 TLAHRGFIFKQT 253
>gi|198477156|ref|XP_002136733.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
gi|198145038|gb|EDY71750.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P +P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ + + K + + A+E L +QGR H
Sbjct: 124 WDFGICLAKECARKNIRKPTCFNQWIDAKSIYQKWYKYRPFSFNNALEHVRLTFQGRAHS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G FSITK LTP N
Sbjct: 184 GIDDAKNLGSLICKMFRDGAPFSITKDLTPHKELN 218
>gi|345780904|ref|XP_850849.2| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Canis lupus
familiaris]
gi|410967106|ref|XP_003990063.1| PREDICTED: ERI1 exoribonuclease 3 [Felis catus]
Length = 337
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 262 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 318
Query: 175 LLSVIMRRGFKFSITK 190
++ + +GF F T
Sbjct: 319 IMKTLAYQGFIFKQTS 334
>gi|354470182|ref|XP_003497438.1| PREDICTED: ERI1 exoribonuclease 3-like [Cricetulus griseus]
Length = 296
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 111/195 (56%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 102 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 160
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 161 ELTGIIQAMVDGQPRLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 220
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 221 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 277
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 278 IMKTLAYRGFIFKQT 292
>gi|242078555|ref|XP_002444046.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
gi|241940396|gb|EES13541.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
Length = 122
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 83/119 (69%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+++VVIDFEATC + ++PQEIIEF SV+V G +G ++ F+TYVRP P LTDF +
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFTSVLVDGATGRTLSTFRTYVRPRHHPCLTDFYR 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LTGI Q VD G++L EAL HD+WL + G +VVTW DWDC+ M E ECR K
Sbjct: 62 DLTGITQDDVDAGVSLAEALEMHDRWLEEHGAKLGKLAVVTWGDWDCRTMPEGECRFKS 120
>gi|195162325|ref|XP_002022006.1| GL14410 [Drosophila persimilis]
gi|195162327|ref|XP_002022007.1| GL14411 [Drosophila persimilis]
gi|195162329|ref|XP_002022008.1| GL14412 [Drosophila persimilis]
gi|194103904|gb|EDW25947.1| GL14410 [Drosophila persimilis]
gi|194103905|gb|EDW25948.1| GL14411 [Drosophila persimilis]
gi|194103906|gb|EDW25949.1| GL14412 [Drosophila persimilis]
Length = 223
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ R + K + + A+E L +QGR +
Sbjct: 124 WDFGICLAKECARKNIRKPTCFNQWIDARAIYKKWYKYCPFSFNNALEHVRLTFQGRAYS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G FSITK LTP N
Sbjct: 184 GIDDAKNLGSLICKMFRDGAPFSITKDLTPHKELN 218
>gi|321471838|gb|EFX82810.1| hypothetical protein DAPPUDRAFT_195366 [Daphnia pulex]
Length = 228
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
FE +V+DFEATCD +R + PQEIIEFP + V E + F YV+P P LT FC
Sbjct: 34 FERLLVLDFEATCDSQRGTIRPQEIIEFPVLNVETNGFETVGTFHRYVKPQVHPTLTPFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
LTGI Q V++ L E + KWLL L N F+VVT DWD + +L +
Sbjct: 94 TSLTGIIQDMVEDAAPLKEVMEDFHKWLLSQHLLNKEFAVVTCGDWDLKELLPRQFLHTG 153
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
PAYF WIN+++ F++ G NL + A L+ GR+H G+DD NIA ++ +
Sbjct: 154 QVVPAYFKSWINIKMIFAESTGVYPRNLPHMLSHAKLVHFGRLHSGIDDCHNIAAVVRFL 213
Query: 180 MRRGFKFSITKSL 192
RR ++ +T L
Sbjct: 214 GRRSSQWRLTSFL 226
>gi|73977201|ref|XP_862517.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Canis lupus
familiaris]
gi|301781887|ref|XP_002926358.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 1 [Ailuropoda
melanoleuca]
Length = 259
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 183
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 184 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 240
Query: 175 LLSVIMRRGFKFSIT 189
++ + +GF F T
Sbjct: 241 IMKTLAYQGFIFKQT 255
>gi|344238514|gb|EGV94617.1| Prion protein-interacting protein [Cricetulus griseus]
Length = 206
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 111/195 (56%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 12 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 70
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 71 ELTGIIQAMVDGQPRLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYL 130
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 131 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 187
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 188 IMKTLAYRGFIFKQT 202
>gi|195162323|ref|XP_002022005.1| GL14409 [Drosophila persimilis]
gi|194103903|gb|EDW25946.1| GL14409 [Drosophila persimilis]
Length = 223
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVESPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ R + K + + A+E L +QGR +
Sbjct: 124 WDFGICLAKECARKNIRKPTCFNQWIDARAIYKKWYKYCPFSFNNALEHVRLTFQGRAYS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G FSITK LTP N
Sbjct: 184 GIDDAKNLGILICKMFRDGAPFSITKDLTPHKELN 218
>gi|198477154|ref|XP_002136732.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198477160|ref|XP_002136735.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
gi|198145037|gb|EDY71749.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198145040|gb|EDY71752.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 114/215 (53%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+++V+ +G + A F YV P +P L++
Sbjct: 4 FTYAISVDFEATCWVNQPAQQFRLSEIIEFPAILVNLKTGMVEAEFHKYVMPVEKPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ + + K + + A+E L +QGR H
Sbjct: 124 WDFGICLAKECARKNIRKPTCFNQWIDAKAIYQKWYKYRPFSFNNALEHVRLTFQGRAHS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DDA N+ L+ + R G FSIT LTP N
Sbjct: 184 GIDDAKNLGSLICKMFRDGAPFSITMDLTPHKELN 218
>gi|432094495|gb|ELK26058.1| ERI1 exoribonuclease 3, partial [Myotis davidii]
Length = 333
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + + PQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 139 YHYFLVLDFEATCDKPQ-IQPQEIIEFPILKLNGRTMEIESTFHMYVQPVIHPQLTPFCT 197
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD ++ML +C+
Sbjct: 198 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKIMLPGQCQYL 257
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA
Sbjct: 258 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIAN 314
Query: 175 LLSVIMRRGFKFSIT 189
++ + RGF F T
Sbjct: 315 IMKTLAYRGFIFKQT 329
>gi|345802232|ref|XP_851106.2| PREDICTED: ERI1 exoribonuclease 2 [Canis lupus familiaris]
Length = 679
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 17/209 (8%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPVLSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEAL----------YFHDKWLLQMGLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L K + G+++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + G+ H
Sbjct: 154 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGIEFLGQEH 213
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 214 SGLDDSRNTAMLAWKMIRDGCLMKITRSL 242
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQW 273
C CG +S + V+ GP G F+ C G + NR CC YF+W
Sbjct: 585 CKCGRRSKRLVVTNNGPNHGKVFYCCPVGKYQENR-KCCGYFKW 627
>gi|330800009|ref|XP_003288032.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
gi|325081920|gb|EGC35419.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
Length = 231
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 112/201 (55%), Gaps = 9/201 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y +V+DFEATC+K++ QEIIEFPSV+V+ + EI++ F+ Y +P P LT FC
Sbjct: 30 FKYLIVLDFEATCEKDQKFPNQEIIEFPSVIVNTETLEIVSTFREYCKPLIVPKLTAFCT 89
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL--------LQMGLNNTNFSVVTWSDWDCQVMLE 112
ELTGI+Q VDN L H +WL + + N VT DWD + L+
Sbjct: 90 ELTGIKQETVDNADLFPNVLKRHYQWLEESLPGVIVNGQIINDQICFVTCGDWDLRQCLQ 149
Query: 113 SECRI-KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
+ ++ I P YF +WIN+++ F+ + + + L +GR HCGL D++N
Sbjct: 150 KQLKLCNNIPTPNYFKKWINIKLQFTDFYSKPSYGMTNMLRELNLELEGRHHCGLSDSLN 209
Query: 172 IARLLSVIMRRGFKFSITKSL 192
IAR++ ++ G F+I L
Sbjct: 210 IARIVKKMLAAGCIFNIISKL 230
>gi|440906215|gb|ELR56504.1| ERI1 exoribonuclease 2, partial [Bos grunniens mutus]
Length = 682
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 120/224 (53%), Gaps = 20/224 (8%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y ++IDFE+TC + H QEIIEFP+V+++ +GEI + F YV+P P+L++FC
Sbjct: 27 FDYLIIIDFESTCWNDGKRHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEFC 86
Query: 60 KELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSV---------------VTWS 103
ELTGI+Q QVD G+ L L F F+ VTWS
Sbjct: 87 VELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVTWS 146
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVH 163
DWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR H
Sbjct: 147 DWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGREH 206
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQAN---PNCLTWN 204
GLDD+ N A L ++R G IT+SL + PN T N
Sbjct: 207 FGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRIPNIFTRN 250
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + + GP G F+ C G + R CC YF+W T
Sbjct: 588 CKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKR-KCCGYFKWEQT 633
>gi|329663381|ref|NP_001192506.1| ERI1 exoribonuclease 2 [Bos taurus]
gi|296473339|tpg|DAA15454.1| TPA: ERI1 exoribonuclease family member 2 [Bos taurus]
Length = 689
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 22/225 (9%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y ++IDFE+TC D +R+ QEIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 FDYLIIIDFESTCWNDGKRH-RSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPILSEF 92
Query: 59 CKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSV---------------VTW 102
C ELTGI+Q QVD G+ L L F F+ VTW
Sbjct: 93 CVELTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTSEVKLCAFVTW 152
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
SDWD V LE EC+ K++ KP + N WI+LRV + + L A++ G+ + GR
Sbjct: 153 SDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYRRKPKGLSGALQEVGMQFLGRE 212
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTPQAN---PNCLTWN 204
H GLDD+ N A L ++R G IT+SL + PN T N
Sbjct: 213 HFGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRIPNIFTRN 257
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + + GP G F+ C G + R CC YF+W T
Sbjct: 595 CKCGRRSKRLTVSNNGPNHGKVFYCCPVGKYQEKR-KCCGYFKWEQT 640
>gi|363739793|ref|XP_424602.3| PREDICTED: ERI1 exoribonuclease 2 [Gallus gallus]
Length = 671
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 26/258 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F++ +V+DFE+TC ++ EIIEFP+V+++ +G I A F T+V+P +P+L++FC
Sbjct: 21 FDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQEQPVLSEFCT 80
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF----------------SVVTWSD 104
LTG+ Q QVD G+ L L KWL ++ + VTW+D
Sbjct: 81 TLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCTFVTWTD 140
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V L EC+ K++ KP FN WI+L+ + + L A++ GL + GR H
Sbjct: 141 WDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPKGLSGALQYVGLAFVGREHS 200
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLT---PQANPNCLTWNRHHFLEPQAMYTPPHTS 221
GLDD+ N ARL ++ G ITKSL P+ N T N + A T P +S
Sbjct: 201 GLDDSRNTARLAWRLICDGCVLKITKSLDKSYPRKNLISRTLNTN-----SADKTLPGSS 255
Query: 222 LIHEFEDCRYCYCGAKSI 239
E R C A S+
Sbjct: 256 --SSLETSRDRTCKANSL 271
>gi|340368534|ref|XP_003382806.1| PREDICTED: ERI1 exoribonuclease 3-like [Amphimedon queenslandica]
Length = 209
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKER--NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
YY+V+DFEATC+ + PQEIIEFP + V+ + E F TYVRPT PLLT F
Sbjct: 10 LSYYLVLDFEATCNASHLPSPRPQEIIEFPVLAVNAKTLETEKIFHTYVRPTSHPLLTPF 69
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECR 116
C +LTGI Q QVD TL E L WL G + F VT DWD + ML +C+
Sbjct: 70 CTQLTGITQSQVDGQPTLPEVLRSFHSWLETNGFLEPSVRFCFVTCGDWDLKTMLPGQCK 129
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P YF W+N++ F ++ G + +E + +GR H G+DD+ NIA++L
Sbjct: 130 YFDWPVPEYFRSWMNIKFVFQRLTGVKAKGMPHMLEYFKIPLEGRHHSGIDDSRNIAKIL 189
Query: 177 SVIMRRGFKFSITKSL 192
+ + R T +L
Sbjct: 190 TRLARIESNLQPTTTL 205
>gi|118366139|ref|XP_001016288.1| exonuclease family protein [Tetrahymena thermophila]
gi|89298055|gb|EAR96043.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 559
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 114/204 (55%), Gaps = 7/204 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
EY VIDFE TCD+E+ L QEIIEFP VV+ EII F ++VRPT P+LT FC
Sbjct: 58 LEYLFVIDFECTCDEEKRLKIQEIIEFPIVVIDLRKKEIIDRFHSFVRPTQYPILTPFCT 117
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL---LQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+LTGI Q QVD+ TL E L D++L ++ GL SV+ D D + L E
Sbjct: 118 KLTGITQEQVDSAPTLPEVLKEVDRFLEKYIKDGLQKV--SVLNDCDSDIRNFLRKETTF 175
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K I F ++I+LR F + N+ + GL ++G HCGLDDA NIAR+
Sbjct: 176 KGIPVKPVFKEFIDLRRIFPVKISEKPTNIDHMLSCVGLTFEGVKHCGLDDATNIARVAL 235
Query: 178 VIMRRGFKFS--ITKSLTPQANPN 199
I +R + ++ + + + P NP+
Sbjct: 236 EIAKRDYIYTEHLKEHMYPYDNPH 259
>gi|327271053|ref|XP_003220302.1| PREDICTED: ERI1 exoribonuclease 3-like [Anolis carolinensis]
Length = 229
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 4/192 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P LT FC
Sbjct: 35 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHSQLTPFCT 93
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + + VT DWD +VML +C+
Sbjct: 94 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPGQCQYL 153
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ YF QWINL+ +S G + L + + L GR H G+DD NIA ++
Sbjct: 154 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMK 213
Query: 178 VIMRRGFKFSIT 189
+ RGF F T
Sbjct: 214 TLAHRGFIFKQT 225
>gi|195162331|ref|XP_002022009.1| GL14413 [Drosophila persimilis]
gi|194103907|gb|EDW25950.1| GL14413 [Drosophila persimilis]
Length = 223
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 112/215 (52%), Gaps = 16/215 (7%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F Y + +DFEATC + EIIEFP+ +V+ +G + A F YV P P L++
Sbjct: 4 FTYAISVDFEATCWENQPAQQFRLSEIIEFPANLVNLKTGMVEAEFHKYVMPVESPQLSE 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
+C LTGIQQ V+ G+ L AL +WL + M + N N VTW++
Sbjct: 64 YCTSLTGIQQKTVEAGVPLQTALNSFIEWLKKELSARNLVLPKMSMTNPQGNCFFVTWTN 123
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K I+KP FNQWI+ + + K + + A+E L +QGR H
Sbjct: 124 WDFETCLAKECARKNIRKPTCFNQWIDAKAIYKKWYKYCPFSFNNALEHVRLTFQGRAHS 183
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+ DA N+ L+ + R G FSITK LTP N
Sbjct: 184 GMHDAKNLGSLICKMFRDGAPFSITKDLTPHKELN 218
>gi|118400656|ref|XP_001032650.1| exonuclease family protein [Tetrahymena thermophila]
gi|89286993|gb|EAR84987.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 215
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 116/196 (59%), Gaps = 9/196 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACF-QTYVRPTFEPLLTDFC 59
F+Y +++DFEATC+K L QEIIEFP VV+ + +I+ F Y++P+ P LT FC
Sbjct: 11 FDYLLILDFEATCEKNVKLECQEIIEFPVVVLDVKNQQILDVFFHHYIKPSVNPKLTAFC 70
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGI+Q QVDNGI+L EAL +L Q L ++F+ +T D+D L E KK
Sbjct: 71 TELTGIKQEQVDNGISLQEALAQLTLFLEQNKLIGSSFTFITCGDFDLGNCLRREALYKK 130
Query: 120 IQKPAYFNQWINLRVPFSKVF-------GDVRC-NLKEAVELAGLIWQGRVHCGLDDAIN 171
I+ P Y +IN++ F K + GD R ++ ++ L G H G+DD+ N
Sbjct: 131 IEIPQYLKNYINIKKVFPKQYYPKQKKEGDNRLPDMVGMLQGLNLKLDGHHHSGIDDSKN 190
Query: 172 IARLLSVIMRRGFKFS 187
IA++ ++++GFKF+
Sbjct: 191 IAKIALTLLQKGFKFN 206
>gi|443698717|gb|ELT98575.1| hypothetical protein CAPTEDRAFT_130678 [Capitella teleta]
Length = 328
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 3/194 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+++Y+V+DFEATC+ + + P EIIEFP VV+ G + +++ F +YVRPT P+LTDFC
Sbjct: 78 YDFYLVVDFEATCE-DSHTWPHEIIEFPIVVIDGKTHQVVDEFHSYVRPTINPVLTDFCI 136
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
LTGI Q QVD+ E L + WL + + VT WD + +C+
Sbjct: 137 SLTGISQDQVDSSPLFPEVLTSVESWLHRNKYCGKGVRSAFVTDGPWDMSRFMYLQCKHS 196
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + N W+N+R + + R +L++ +E G+ ++GR HCGLDD NIAR+
Sbjct: 197 NLAFPRWANTWVNIRKTYCNFYHFKRTSLRKMLENMGMSFEGRPHCGLDDTRNIARIAQR 256
Query: 179 IMRRGFKFSITKSL 192
+++ G ++ + L
Sbjct: 257 MLQDGSPLNVNERL 270
>gi|17541516|ref|NP_500418.1| Protein M02B7.2 [Caenorhabditis elegans]
gi|373937875|emb|CCD70202.1| Protein M02B7.2 [Caenorhabditis elegans]
Length = 266
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 1 FEYYVVIDFEATCDK--ERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC + +HP QEIIEFP V +S I F Y++PT P LT
Sbjct: 58 FDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYIKPTEFPRLTS 117
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LT I Q VD L E L D WL + L NF+ VT DWD +V L SE +
Sbjct: 118 FCTSLTRIIQEMVDEKPKLPEVLSEFDSWLKEDSRLKQGNFAFVTCGDWDLKVALPSEAK 177
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I+ P YFNQWIN++ +++ + + + + L QGR+H G+DD NI ++
Sbjct: 178 FKNIEIPEYFNQWINVKKAYAEHTNHFAKGMTQLLAIYKLQHQGRLHSGIDDVANICEIV 237
Query: 177 SVIMRRGFKFSITKS 191
+ R G + IT S
Sbjct: 238 RCLGRDGHNYRITGS 252
>gi|393907515|gb|EFO17571.2| exonuclease [Loa loa]
Length = 267
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC++ + P QEIIEFP + +SG + E I+ F YV+PT P+LT FC
Sbjct: 59 FDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKPTERPILTSFC 118
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN------TNFSVVTWSDWDCQVMLES 113
ELTGI Q V + +L E L DKWL+ L N ++F+ +T DWD V+L S
Sbjct: 119 TELTGIVQETVASQESLPEVLDAFDKWLINSNLINADHSMKSHFTFITCGDWDLGVLLPS 178
Query: 114 ECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
E + ++ P YF +WINL+ F K G +L + L GR+H G+DD N+
Sbjct: 179 EANYRNLKLPDYFKRWINLKKAFCKWNGYFAKSLTVMLHDLELNHLGRLHSGIDDVRNMC 238
Query: 174 RLLSVIMRRGFKFSIT 189
++ + + G F T
Sbjct: 239 QITRSLAKSGCVFQNT 254
>gi|443697836|gb|ELT98134.1| hypothetical protein CAPTEDRAFT_225969 [Capitella teleta]
Length = 212
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 108/195 (55%), Gaps = 3/195 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y++V+DFEATCD + + PQEIIEFP + V+ + E+ + F YV P L+ FC
Sbjct: 18 FDYFLVLDFEATCDDKVQVDPQEIIEFPVLKVNAKTFEVESTFHQYVEPRVHKQLSPFCV 77
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN--TNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD L L KW+ GL N F VT DWD + ML S+ +
Sbjct: 78 ELTGIIQDMVDGQQHLEAVLGDFQKWMQDEGLLNEGVKFIFVTCGDWDLKKMLPSQAKYF 137
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
I P + WIN++ PF+ V G + ++ E ++ + GR H G+DD NIA++L
Sbjct: 138 DIAYPDHMKSWINIKRPFTDVVGQYPKNDMMEMLQKLNIAHTGRHHSGIDDCKNIAKILR 197
Query: 178 VIMRRGFKFSITKSL 192
I +G+ F T SL
Sbjct: 198 GIALKGYCFRCTLSL 212
>gi|407425460|gb|EKF39438.1| hypothetical protein MOQ_000337 [Trypanosoma cruzi marinkellei]
Length = 541
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC++ R L EIIEFP V++ S I+ FQ YVRP P+L+DFC
Sbjct: 68 FDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHHILTEFQRYVRPVVNPILSDFCT 127
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLESECR 116
ELTGI Q VD T ++L G ++ VT DWD + ML S+ R
Sbjct: 128 ELTGITQSVVDTAKTFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLR 187
Query: 117 I-----KKIQKPAYFNQWINLRVPFSKV----FGDVRCNLKEAVELAGLIWQGRVHCGLD 167
I P F +W NL+VP + G V +LKE + GL +GR H G+D
Sbjct: 188 TTAKTGTAIVAPPTFRRWCNLKVPMRAIAPTKAGGV-FDLKEMLAAVGLPLKGRHHSGID 246
Query: 168 DAINIARLLSVIMRRGFKFSIT 189
D NIA ++ ++RRG + T
Sbjct: 247 DCRNIASIVQELLRRGHVIAPT 268
>gi|71651495|ref|XP_814425.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879394|gb|EAN92574.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 284
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC++ R L EIIEFP V++ S I+ FQ YVRP P+L+DFC
Sbjct: 56 FDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCT 115
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLESECR 116
ELTGI+Q VD T ++L G ++ VT DWD + ML S+ R
Sbjct: 116 ELTGIKQSVVDAAETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLR 175
Query: 117 IKK-----IQKPAYFNQWINLRVPFSKVF-GDVRC--NLKEAVELAGLIWQGRVHCGLDD 168
+ I P+ F +W NL+VP + R +L+E + GL +GR H G+DD
Sbjct: 176 TTEKTGTAIVAPSTFRRWCNLKVPMRTIVPTKARGIFDLREMLAAVGLPLKGRHHSGIDD 235
Query: 169 AINIARLLSVIMRRGFKFSIT 189
NIA ++ ++RRG + T
Sbjct: 236 CRNIASVVQELLRRGHVIAPT 256
>gi|71662500|ref|XP_818256.1| phosphotransferase [Trypanosoma cruzi strain CL Brener]
gi|70883496|gb|EAN96405.1| phosphotransferase, putative [Trypanosoma cruzi]
Length = 539
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC++ R L EIIEFP V++ S I+ FQ YVRP P+L+DFC
Sbjct: 56 FDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCT 115
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLESECR 116
ELTGI+Q VD T ++L G ++ VT DWD + ML S+ R
Sbjct: 116 ELTGIKQSVVDAAETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLR 175
Query: 117 IKK-----IQKPAYFNQWINLRVPFSKVF-GDVRC--NLKEAVELAGLIWQGRVHCGLDD 168
+ I P+ F +W NL+VP + R +L+E + GL +GR H G+DD
Sbjct: 176 TTEKTGTAIVAPSTFRRWCNLKVPMRTIVPTKARGIFDLREMLAAVGLPLKGRHHSGIDD 235
Query: 169 AINIARLLSVIMRRGFKFSIT 189
NIA ++ ++RRG + T
Sbjct: 236 CRNIASVVQELLRRGHVIAPT 256
>gi|395730614|ref|XP_003780607.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 3 [Pongo
abelii]
Length = 316
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + YV+P P LT FC
Sbjct: 120 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTXHMYVQPVVHPQLTPFCT 178
Query: 61 ELTGIQQHQV--DNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECR 116
ELTGI Q V D +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 179 ELTGIIQAMVEMDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQ 238
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NI
Sbjct: 239 YLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNI 295
Query: 173 ARLLSVIMRRGFKFSIT 189
A ++ + RGF F T
Sbjct: 296 ANIMKTLAYRGFIFKQT 312
>gi|407860369|gb|EKG07376.1| hypothetical protein TCSYLVIO_001498 [Trypanosoma cruzi]
Length = 550
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC++ R L EIIEFP V++ S I+ FQ YVRP P+L+DFC
Sbjct: 67 FDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPVVNPILSDFCT 126
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLESECR 116
ELTGI+Q VD T ++L G ++ VT DWD + ML S+ R
Sbjct: 127 ELTGIKQSVVDAAETFPLVFDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLKTMLPSQLR 186
Query: 117 IKK-----IQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ I P F +W NL+VP + +++E + GL +GR H G+DD
Sbjct: 187 TTEKTGTAIVAPPTFRRWCNLKVPMRAIVPTKARGMFDMREMLAAVGLPLKGRHHSGIDD 246
Query: 169 AINIARLLSVIMRRGFKFSIT 189
NIA ++ ++RRG + T
Sbjct: 247 CRNIASVVQELLRRGHVIAPT 267
>gi|328877052|gb|EGG25415.1| putative RNase III [Dictyostelium fasciculatum]
Length = 297
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y VV+DFEATCD + QE+IEFPSV+V +++A F YVRP + P L+ FC
Sbjct: 61 FKYIVVLDFEATCDDGTKIKNQEVIEFPSVIVDVEKQQVVAQFAEYVRPVYNPTLSAFCT 120
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN--------FSVVTWSDWDCQVMLE 112
+LTGIQQ VD+ H K+L+ L N F+V+ DWD ML
Sbjct: 121 QLTGIQQATVDSADIFENVFKRHFKFLVDNKLLQENGARNEENPFAVLCCGDWDLLQMLP 180
Query: 113 SECRIKK--------IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
++CRI K + P YF +WIN++ F K + + + + GR H
Sbjct: 181 AQCRINKNESGELHYLPPPNYFTEWINVKKIFEKNYNMSAYGMANMLRQLSIPLVGRHHS 240
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKS 191
G+DD NI+ ++ ++++G F IT +
Sbjct: 241 GIDDCRNISSIVIAMLKKGCLFEITTT 267
>gi|289739411|gb|ADD18453.1| 3' histone exonuclease 1 [Glossina morsitans morsitans]
Length = 226
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 105/184 (57%), Gaps = 16/184 (8%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y + +DFEATC + + EIIEFP+V+V+ +G+I A F Y+ P P L+
Sbjct: 43 YDYVICVDFEATCWENQAPPRWRESEIIEFPAVLVNLKTGKIEAEFHKYIMPIESPKLSA 102
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSD 104
FC +LTGI Q VDNGI L AL +WL + M +N N + V+W+D
Sbjct: 103 FCTKLTGIAQKTVDNGIPLQTALMMFQEWLRKELRARHLSLPKMTKDNKLGNCAFVSWTD 162
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD + L EC K+++KP YFNQWI+LR + K + N +A+ GL +QGR H
Sbjct: 163 WDFGICLHKECSRKRLKKPPYFNQWIDLRAIYKKWYKYQPLNFADALRHVGLSFQGREHS 222
Query: 165 GLDD 168
G+DD
Sbjct: 223 GIDD 226
>gi|427778455|gb|JAA54679.1| Putative exonuclease [Rhipicephalus pulchellus]
Length = 283
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 28/215 (13%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y++++DFEATC E+ + PQEIIEFP + V+G + E + F TYV+P P LT FC
Sbjct: 69 YDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQAHPQLTAFC 128
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR--- 116
ELTGI Q VD+ L E L D W+ + GL +T+ DWD Q ML S+C
Sbjct: 129 TELTGIVQDMVDDQPHLQEVLSRFDDWMREQGLLQARTVFITFGDWDLQKMLPSQCAYLG 188
Query: 117 --------------IKK----------IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVE 152
++K I P Y +WINL+ F++ G L +A+
Sbjct: 189 XXARTVFITFGDWDLQKMLPSQCAYLGIPVPPYMTRWINLKRAFAECTGHWPKTLLDALR 248
Query: 153 LAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFS 187
L GR H G+DD N+ +L++ + RG++F+
Sbjct: 249 FCRLPHLGRHHSGIDDCRNLTQLVAWLASRGYQFA 283
>gi|66472468|ref|NP_001018476.1| ERI1 exoribonuclease 2 [Danio rerio]
gi|82228769|sp|Q502M8.1|ERI2_DANRE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|63100865|gb|AAH95637.1| Zgc:111991 [Danio rerio]
Length = 555
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 111/204 (54%), Gaps = 15/204 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + ++IDFE+TC +E++ QEIIEFP+V++S SG + + F +YV+P P+L+ FC
Sbjct: 32 FSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPVLSAFCT 91
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMG-------LNNTNFSV--------VTWSDW 105
ELTGI Q QVD+ L L +WL + L +++ + VTWSDW
Sbjct: 92 ELTGITQDQVDSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQLCAFVTWSDW 151
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D V L EC+ K++ P WI+LR + + L+ A+ G+ + GR H G
Sbjct: 152 DLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPKGLRGALLDLGIEFTGREHSG 211
Query: 166 LDDAINIARLLSVIMRRGFKFSIT 189
L DA N A L +M G + SIT
Sbjct: 212 LVDARNTALLAQRMMTDGCQLSIT 235
>gi|432943748|ref|XP_004083266.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oryzias latipes]
Length = 342
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 113/198 (57%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC+++ LH EIIEFP V+++ + +I+ FQ+YV+P P L+D
Sbjct: 120 YDYICVVDFEATCEEDNPSDFLH--EIIEFPLVLINTHTLQIVDTFQSYVKPELNPKLSD 177
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-FSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD + L KWL + L + ++++T WD L +CR
Sbjct: 178 FCVTLTGITQEMVDEADPFPQVLQRVVKWLQERDLGTKHKYAILTDGSWDMSKFLNIQCR 237
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRC--NLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ +I+ P + +WIN+R + + R L +E G+ ++GR HCGLDD+ NIAR
Sbjct: 238 VSRIRYPQFAKKWINIRKSYGNFYKLPRSQTKLSTMLEKLGMKYEGRPHCGLDDSRNIAR 297
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 298 IAVRMLQDGCQLRVNERM 315
>gi|256083202|ref|XP_002577838.1| prion interactor pint1 [Schistosoma mansoni]
gi|360044777|emb|CCD82325.1| putative prion interactor pint1 [Schistosoma mansoni]
Length = 191
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTG 64
+V+DFEATC+++R L EIIEFP ++++ + + A F YVRPT P+L+DFC ELTG
Sbjct: 1 MVLDFEATCEQDRKLPVAEIIEFPVLMINASTLQTEAVFHRYVRPTINPVLSDFCTELTG 60
Query: 65 IQQHQVDNGITLGEALYFHDKWLLQMGLNNT--NFSVVTWSDWDCQVMLESECRIKKIQK 122
I Q VD+ L L + +L LN F+ VT D D + ML +C+ I
Sbjct: 61 IIQSMVDDQPDLPTVLKIFNSFLDANNLNTIPYQFAFVTCGDCDLKTMLPRQCKALGIDV 120
Query: 123 PAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
P YF QWINL+ + V G + + + GR H G+DD NIA +L ++R
Sbjct: 121 PDYFKQWINLKQVYCNVMGQFPFGMMSMLSGLNIKHTGRHHSGIDDCHNIANILRELIRC 180
Query: 183 GFKFSITKSL 192
G +T ++
Sbjct: 181 GATLDVTGNI 190
>gi|307191666|gb|EFN75140.1| Prion protein-interacting protein [Harpegnathos saltator]
Length = 225
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FEY +V+DFEATC+K + L PQEIIE P V+S ++ F Y++P P+LT FC
Sbjct: 12 FEYLLVMDFEATCEKHQPLKPQEIIELPCAVLSTRDWKLKDVFHEYIKPRVHPILTPFCT 71
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSV-VTWSDWDCQVMLESECRIK 118
ELTGI Q VDN + +WL + G + +N S VT +WD +VML S+C++
Sbjct: 72 ELTGIIQDIVDNQPYFPDVFSNFCEWLTKGGYFDESNKSTFVTCGNWDLKVMLPSQCKLD 131
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F QWI+L+ FS+ +L + + + QGR+H G+DD N+ ++
Sbjct: 132 GITLPDQFKQWIDLKHTFSEFSMYYPRSLPDMLTRLNIPLQGRLHSGIDDVKNMVAIIQT 191
Query: 179 IMRR-GFKFSITKSLT 193
+ + +F IT S T
Sbjct: 192 LQEKYNVQFKITSSST 207
>gi|167522769|ref|XP_001745722.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776071|gb|EDQ89693.1| predicted protein [Monosiga brevicollis MX1]
Length = 320
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 17/206 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FE V+DFEATC++ER+ P EIIE P++++ SGE++ FQTYVRP P L+ FC
Sbjct: 98 FELVCVMDFEATCEEERSPFPHEIIEIPAILLDAKSGELLDTFQTYVRPKLNPQLSKFCT 157
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL------LQMGLNNTNFSVVTWSD--WDCQVMLE 112
LTGI Q QVD EA + +L + + + V+ SD WD + L
Sbjct: 158 NLTGITQDQVDAAKLFPEAWQDFEDFLGKAVQKFKASHDVDDVRVLCASDGPWDFRDFLA 217
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVF-----GDVRC----NLKEAVELAGLIWQGRVH 163
+C++ ++ PA QW+++R +K F G R L ++ GL ++GR H
Sbjct: 218 FQCQLSQMDYPAVCQQWMDVRKRLTKHFKLKWAGPERAAYATGLDFMLQAVGLTFEGRPH 277
Query: 164 CGLDDAINIARLLSVIMRRGFKFSIT 189
G+DD+ NIARL+ V++ G + S+T
Sbjct: 278 SGIDDSRNIARLVQVLIDEGAQLSVT 303
>gi|326929461|ref|XP_003210882.1| PREDICTED: ERI1 exoribonuclease 2-like [Meleagris gallopavo]
Length = 716
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 110/201 (54%), Gaps = 16/201 (7%)
Query: 8 DFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
DFE+TC ++ EIIEFP+V+++ +G I A F +V+P +P+L++FC LTG+ Q
Sbjct: 70 DFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHAFVQPQEQPVLSEFCTALTGVTQ 129
Query: 68 HQVDNGITLGEALYFHDKWLLQM---------------GLNNTNF-SVVTWSDWDCQVML 111
QVD G+ L L KWL ++ + T + VTW+DWD V L
Sbjct: 130 KQVDEGVPLHICLSQFLKWLQKIQKEKKFLFISETPSNAIPETKLCAFVTWTDWDLGVCL 189
Query: 112 ESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
EC+ K+++KP FN WI+L+ + + L A++ GL + GR H GLDD+ N
Sbjct: 190 HYECKRKQLRKPDIFNSWIDLKATYRAFYNRKPKGLSGALQDLGLAFVGREHSGLDDSRN 249
Query: 172 IARLLSVIMRRGFKFSITKSL 192
ARL ++ G ITKSL
Sbjct: 250 TARLAWRLICDGCVLKITKSL 270
>gi|403364890|gb|EJY82220.1| Phosphotransferase [Oxytricha trifallax]
Length = 460
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 119/225 (52%), Gaps = 27/225 (12%)
Query: 1 FEYYVVIDFEATCDK-ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y V DFE C++ +NL EIIEFP V++ + +++A FQTYV+PT P LT+FC
Sbjct: 232 FDYICVYDFECQCEEGTKNLTFNEIIEFPVVIIDVKAQKVVAEFQTYVKPTLHPELTEFC 291
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LTGI+Q QVD G+T+ EA+ ++L + G+ + F ++ D+D M E K
Sbjct: 292 TKLTGIEQKQVDEGVTIKEAIQLVHEFLGKNGVLESEFVFLSCGDFDGNQM-RREALHKG 350
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV-----------------ELAGLIWQGRV 162
P Y +WIN++ F K D + E + EL GL +GR
Sbjct: 351 FDVPNYLKRWINIKKVFPKHLFDEKAAKNEVIFVKDVKKSAVSGMPHMLELCGLELEGRH 410
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLT--------PQANPN 199
H G+DD NIAR ++ GF+F+ L+ PQ++PN
Sbjct: 411 HSGIDDCKNIARCAIKCLQEGFQFTQGMVLSHPFSIDEQPQSDPN 455
>gi|268552995|ref|XP_002634480.1| Hypothetical protein CBG10739 [Caenorhabditis briggsae]
Length = 279
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHP----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F+Y +++DFEATC +E +L P QEIIEFP V +S I F YVRPT P L+
Sbjct: 64 FDYLLILDFEATC-QENSLGPMLPVQEIIEFPVVQLSTSDWSEIRRFHQYVRPTECPKLS 122
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q VD+ T+ L D+W+ + L NF+ VT DWD +V L +E
Sbjct: 123 SFCTTLTGIIQEMVDDKPTISNVLENFDEWMKEDSRLEKGNFAFVTCGDWDLKVALTNEA 182
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ K ++ P YF QWIN++ ++ + + +++ L +GR H G+DD NI +
Sbjct: 183 KFKNLKIPEYFTQWINVKKAYAAHTNHFAKGMTQLLKIYDLQHKGRHHSGIDDVANICEI 242
Query: 176 LSVIMRRGFKFSITKS 191
+ + + G + IT S
Sbjct: 243 VRCLGKDGHNYRITSS 258
>gi|56758854|gb|AAW27567.1| SJCHGC03520 protein [Schistosoma japonicum]
Length = 201
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y++V+DFEATC+K+ + EIIEFP ++V+ + + F YVRPT P+L+DFC
Sbjct: 7 FAYFMVLDFEATCEKDIKIPDPEIIEFPVLMVNAYTLHTESIFHHYVRPTINPVLSDFCT 66
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN--NTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q +++ L L D +L + L F+ VT DWD ++ML +C++
Sbjct: 67 ELTGIIQSMIEDEPELPSILKMFDLFLDKNNLKICPYKFAFVTCGDWDLKIMLPQQCKLL 126
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F QWINL+ + V G ++ + + GR H G+DD NIA +L
Sbjct: 127 GIDVPDCFKQWINLKQVYCDVMGQFPFSMMSMLAGLNIKHTGRHHSGIDDCRNIANILCE 186
Query: 179 IMRRGFKFSITKSL 192
++R G IT ++
Sbjct: 187 LIRCGATPDITGNI 200
>gi|118387765|ref|XP_001026985.1| exonuclease family protein [Tetrahymena thermophila]
gi|89308755|gb|EAS06743.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 251
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII-ACFQTYVRPTFEPLLTDFC 59
F++ +++DFEATC + L+ QEIIEFP V++ I+ F TYV+PT+ P+LT FC
Sbjct: 18 FDFLLILDFEATCSNDEKLNVQEIIEFPIVILDLKKNVILPEYFHTYVKPTYHPILTKFC 77
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELT I Q QVDNG+ L A+ D++L +MG+ + F+ V D+D L E + KK
Sbjct: 78 TELTHITQEQVDNGVILESAIQQADEFLNKMGIIDKKFAFVCCGDFDLGQCLRLEAKFKK 137
Query: 120 IQKPAYFNQWINLRVPFSKVF---GDVRCN----LKEAVELAGLIWQGRVHCGLDDAINI 172
I P YF Q+IN++ F K + ++ N + ++ L QG H GLDD+ NI
Sbjct: 138 INYPQYFKQYINIKKQFPKEWYTESIIKWNKPPGMVAMLKAINLELQGTHHSGLDDSKNI 197
Query: 173 ARLLSVIMRRG 183
AR+ ++
Sbjct: 198 ARIAQFMVEHN 208
>gi|332023240|gb|EGI63496.1| Prion protein-interacting protein [Acromyrmex echinatior]
Length = 218
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+EY +V+DFEATC++ L PQEIIE P VVS ++ F TYV+P P LT FC
Sbjct: 12 YEYLLVMDFEATCERYTVLKPQEIIELPCAVVSTCDWKLKDMFHTYVKPRVHPTLTPFCT 71
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--NFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD+ +WL + G + S VT +WD + ML S+C +
Sbjct: 72 ELTGIMQETVDDQPYFANVFSNFCEWLTKGGYFDKPEKSSFVTCGNWDLKTMLPSQCALD 131
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F QW+ L+ F + G +LK+ + + +GR+H G+DD N+ ++ V
Sbjct: 132 GITLPDQFKQWVELKYIFCESTGYYPKSLKDMLVRLNVPLKGRLHSGIDDVKNMVSIILV 191
Query: 179 IMRR-GFKFSITKSLTPQA 196
+ + +F IT SLT A
Sbjct: 192 LKEKYNTQFKITSSLTTSA 210
>gi|281337568|gb|EFB13152.1| hypothetical protein PANDA_015995 [Ailuropoda melanoleuca]
Length = 365
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 115/220 (52%), Gaps = 32/220 (14%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLR------VPFSKVF--------GDVRCNLKEAVELAG--------- 155
+ YF QWINL+ VP + G+ + + K++ G
Sbjct: 262 GLPVADYFKQWINLKKVLKRGVPSGRTASLEEQAGKGESKSHCKKSSFAMGCWPKNGLLD 321
Query: 156 ------LIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
L GR H G+DD NIA ++ + +GF F T
Sbjct: 322 MNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYQGFIFKQT 361
>gi|341890887|gb|EGT46822.1| hypothetical protein CAEBREN_23366 [Caenorhabditis brenneri]
Length = 273
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 1 FEYYVVIDFEATCDKERN--LHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
EY +V+DFEATC + + P QEIIEFP V + + F YVRPT P LT
Sbjct: 63 LEYLLVLDFEATCQENARGPMQPVQEIIEFPVVQLRTSDWAEVRRFHQYVRPTECPKLTS 122
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL L D W+ + L NF+ VT DWD +V L +E +
Sbjct: 123 FCTSLTGIIQEMVDRQPTLSAVLEDFDAWMKEDSRLKTGNFAFVTCGDWDLKVALPNEAK 182
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K IQ P Y QWIN++ ++ + E +++ L QGR H G+DD NI ++
Sbjct: 183 FKNIQTPEYMKQWINVKKAYAAHTNHFARGMPELLKIYNLKLQGRHHSGIDDVANICEIV 242
Query: 177 SVIMRRGFKFSITKS 191
+ + G + IT S
Sbjct: 243 RCLGKDGHNYRITGS 257
>gi|410918560|ref|XP_003972753.1| PREDICTED: 3'-5' exoribonuclease 1-like [Takifugu rubripes]
Length = 340
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y V+DFEATC D + H EIIEFP V+++ + EI+ FQ YV+P P L+DF
Sbjct: 118 YDYICVVDFEATCEVDNPSDFH-HEIIEFPMVLINTHTLEIVDSFQEYVKPELNPQLSDF 176
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRI 117
C +LTGI Q VD + L WL + L ++++T WD L +C+I
Sbjct: 177 CVKLTGITQKMVDEADSFPAVLERVVAWLQERELGTKYKYAILTDGSWDMSKFLNIQCQI 236
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+I+ P + +WIN+R + + R L +E GL + GR HCGLDD+ NIAR+
Sbjct: 237 SRIRYPQFAKKWINIRKSYRNFYKVSRTQTKLSTMLEKLGLTYSGRPHCGLDDSRNIARI 296
Query: 176 LSVIMRRGFKFSITKSL 192
+++ G + + + +
Sbjct: 297 AVRMLQDGCQLRVNERM 313
>gi|147900544|ref|NP_001089554.1| exoribonuclease 1 [Xenopus laevis]
gi|67678439|gb|AAH97876.1| Thex1 protein [Xenopus laevis]
Length = 348
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y VIDFEATC+ +L +P EIIEFP V+++ + EI FQ YVRP P L++FC
Sbjct: 126 YDYICVIDFEATCEAGNSLDYPHEIIEFPIVLLNTHTLEIEDVFQCYVRPEINPQLSEFC 185
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q VD T L +W+ + L + ++++T WD L +CRI
Sbjct: 186 VNLTGITQDTVDKSDTFPNVLRSVVEWMREKELGSKYKYAILTDGSWDMSKFLNMQCRIS 245
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLK--EAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ P + +WIN+R + + R K +E G+ + GR+H GLDD+ NIAR+
Sbjct: 246 RLKYPRFAKKWINIRKSYGNFYKVPRTQTKLTTMLEKLGMTYNGRLHSGLDDSKNIARIA 305
Query: 177 SVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 306 AHMLQDGCELRVNERM 321
>gi|17541752|ref|NP_499887.1| Protein R02D3.8 [Caenorhabditis elegans]
gi|351064690|emb|CCD73172.1| Protein R02D3.8 [Caenorhabditis elegans]
Length = 266
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 1 FEYYVVIDFEATCDK--ERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC + +HP QEIIEFP V +S I F YV+PT P LT
Sbjct: 58 FDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPTECPRLTS 117
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL + L D WL + L F+ VT DWD +V L +E +
Sbjct: 118 FCTSLTGIIQEMVDEKPTLPQVLSEFDSWLKEDSRLEKGKFAFVTCGDWDLKVALPNEAK 177
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K I P YFNQWIN++ ++ + + + + L QGR H G+DD NI ++
Sbjct: 178 FKNIGIPEYFNQWINVKKASAEHTNHFAKGIAQLLAIYKLQHQGRHHSGIDDVANICEIV 237
Query: 177 SVIMRRGFKFSITKS 191
+ G + IT S
Sbjct: 238 RCLGMNGHNYQITGS 252
>gi|355557931|gb|EHH14711.1| hypothetical protein EGK_00679 [Macaca mulatta]
Length = 365
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLR-------VPFSKVFGDVRCNLKE------AVELAGLIWQ------ 159
+ YF QWINL+ + + KE A A W
Sbjct: 262 GLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFAMGCWPKNGLLD 321
Query: 160 ----------GRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
GR H G+DD NIA ++ + RGF F T
Sbjct: 322 MNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQT 361
>gi|355745231|gb|EHH49856.1| hypothetical protein EGM_00583 [Macaca fascicularis]
Length = 365
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 143 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 201
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 202 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 261
Query: 119 KIQKPAYFNQWINLR-------VPFSKVFGDVRCNLKE------AVELAGLIWQ------ 159
+ YF QWINL+ + + KE A A W
Sbjct: 262 GLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFAMGCWPKNGLLD 321
Query: 160 ----------GRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
GR H G+DD NIA ++ + RGF F T
Sbjct: 322 MNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQT 361
>gi|66811074|ref|XP_639244.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
gi|60467872|gb|EAL65886.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
Length = 220
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y +V+DFEATC+K+ QEIIEFPSV+++ + E ++ F+ YV+P P L+ FC
Sbjct: 21 FKYLIVLDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREYVKPIINPNLSKFCT 80
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL---LQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
ELTGI+Q V+N + L H W L + + + V DWD L + ++
Sbjct: 81 ELTGIKQETVENAALFPDVLKSHCDWFFESLPKDIQSDEYCFVCCGDWDLLQCLPKQLKL 140
Query: 118 -KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ KP+Y ++WIN++ ++ + + + + +GR HCGL D++NI+++L
Sbjct: 141 CNNLSKPSYLSKWINIKKQYTLFYNRPSFGMTNMLRELNIPLEGRHHCGLSDSLNISKIL 200
Query: 177 SVIMRRGFKFSITKSL 192
++ G F + ++
Sbjct: 201 KRMIEEGCNFDLVSTM 216
>gi|291236484|ref|XP_002738169.1| PREDICTED: CG7896-like [Saccoglossus kowalevskii]
Length = 1408
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y VVID+EATC+KE + EIIEFP V+++ + ++ F+T+ RP P L+DFC
Sbjct: 1086 FDYLVVIDYEATCEKENPTDYVHEIIEFPVVLINSKTLKMEKEFRTFCRPVLHPKLSDFC 1145
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q QVD + L + WL + L + +F++VT WD L +C +
Sbjct: 1146 TELTGITQAQVDGAPLFSDVLDQFENWLEENKLGSEYSFAIVTDGPWDIICFLNVQCVLS 1205
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+I P Y +WIN+R FS + R L ++ G+ ++GR H G+ D NIAR++
Sbjct: 1206 QISFPEYARRWINIRKLFSNYYHTRRLKLTLMLDHLGMTFEGRQHSGIADCRNIARIMVK 1265
Query: 179 IMRRG 183
++ G
Sbjct: 1266 LLEDG 1270
>gi|256080351|ref|XP_002576445.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645551|emb|CCD59791.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 232
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 14/196 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ ++DFE+TC ++ P EIIEFP V++ V+G +I FQ++V+PT P L+ FC
Sbjct: 29 LRWFFILDFESTCFEDDIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENPELSVFCS 88
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN--------NTNFSVVTWSDWDCQVMLE 112
LTGIQQ V+N TL L + WL + N T+ VTW+DWD L
Sbjct: 89 NLTGIQQCDVENAPTLAVVLRKFEHWLRKAKENLGCSFKGQPTSAIFVTWTDWDISTCLW 148
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDV------RCNLKEAVELAGLIWQGRVHCGL 166
ECR KK+ P I+L+ F + G R LK+A+ L GL ++GR H G+
Sbjct: 149 DECRRKKLPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDALNLIGLHFEGRPHRGI 208
Query: 167 DDAINIARLLSVIMRR 182
DDA N +RLL ++ +
Sbjct: 209 DDARNTSRLLLHLLSK 224
>gi|322787625|gb|EFZ13665.1| hypothetical protein SINV_06869 [Solenopsis invicta]
Length = 254
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 3/199 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
FEY +V+DFEATC++ + + PQEIIE P V+S ++ F +YV+P P LT FC
Sbjct: 38 FEYLLVLDFEATCERYQVIKPQEIIELPCAVLSTHDWKLKDMFHSYVKPRVHPTLTPFCT 97
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN--TNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VD + +WL + G + S VT +WD + ML ++C +
Sbjct: 98 ELTGIMQETVDGQPYFVDVFPIFCEWLTKRGYFDRPEKSSFVTCGNWDLKTMLPNQCDLD 157
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN-IARLLS 177
I P F QWI+L+ F + G +LK+ + + +GR+H G+DD N I+ +L+
Sbjct: 158 GIAPPDQFKQWIDLKHMFCESTGYYPKSLKDMLARLNMPLKGRLHSGIDDVKNMISIMLA 217
Query: 178 VIMRRGFKFSITKSLTPQA 196
+ + +F IT SLT A
Sbjct: 218 LKEKYNTQFKITSSLTTSA 236
>gi|157870091|ref|XP_001683596.1| putative phosphotransferase [Leishmania major strain Friedlin]
gi|68126662|emb|CAJ04503.1| putative phosphotransferase [Leishmania major strain Friedlin]
Length = 582
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 26/216 (12%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC+ +R + E+IEFP V++ + +A FQ YVRP P+L+ FC
Sbjct: 55 FDAYVVLDFEATCEADRRISDAEVIEFPMVLIDARTATPVAEFQRYVRPVKNPVLSRFCT 114
Query: 61 ELTGIQQHQVDN----GITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLE 112
ELTGI Q V + EAL F L + GL + ++ VVT DWD + ML
Sbjct: 115 ELTGITQDMVSRCDPFPVVYCEALQF----LAEAGLGDAPPMRSYCVVTCGDWDLKTMLP 170
Query: 113 SECRIKKIQ-KPAYFNQWINLRVPFSKVFGDVR-------------CNLKEAVELAGLIW 158
++ R+ Q P F +W NL+ S++ + + +++ GL
Sbjct: 171 AQMRVSGQQGTPLSFQRWCNLKKRMSQLGFGNGSGCGGGAAPPLGPSGMPDMLQMLGLPL 230
Query: 159 QGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
QGR H G+DD N+A L ++RRG +T S P
Sbjct: 231 QGRQHSGIDDCRNLAAALCTLLRRGLVIDVTFSTAP 266
>gi|341877999|gb|EGT33934.1| hypothetical protein CAEBREN_06895 [Caenorhabditis brenneri]
Length = 215
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 1 FEYYVVIDFEATCDKERN--LHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
EY +V+DFEATC + + P QEIIEFP V + I F YVRP P LT
Sbjct: 5 LEYLLVLDFEATCQENSKGPMQPVQEIIEFPVVQLRTSDWAEIRRFHQYVRPIECPKLTS 64
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD TL L D W+ + L NF+ VT DWD +V L +E +
Sbjct: 65 FCTSLTGIIQEMVDGQPTLSAVLEDFDAWMKEDSRLKTGNFAFVTCGDWDLKVALPNEAK 124
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K IQ P Y QWIN++ ++ + E +++ L QGR H G+DD NI ++
Sbjct: 125 FKNIQIPEYMKQWINVKKAYAAHTNHFARGMPELLKIYNLKLQGRHHSGIDDVANICEIV 184
Query: 177 SVIMRRGFKFSITKS 191
+ + G + IT S
Sbjct: 185 RCLGKDGHNYRITGS 199
>gi|47218345|emb|CAG04177.1| unnamed protein product [Tetraodon nigroviridis]
Length = 340
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y V+DFEATC D + H EIIEFP V+++ + EI+ F+ YV+P P L+DF
Sbjct: 118 YDYICVVDFEATCEVDNPSDYH-HEIIEFPMVLINTHTLEIVDSFREYVKPELNPQLSDF 176
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRI 117
C +LTGI Q VD L WL + L ++++T WD L +C+I
Sbjct: 177 CVKLTGITQKMVDKAEPFPAVLERAVAWLQERELGTKYKYAILTDGSWDMSKFLNIQCQI 236
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+I+ P + +WIN+R + + R L +E GL + GR HCGLDD+ NIAR+
Sbjct: 237 SRIRYPQFAKKWINIRKAYRNFYKVSRTQTKLSTMLEKLGLTYNGRPHCGLDDSRNIARI 296
Query: 176 LSVIMRRGFKFSITKSL 192
+++ G + + + +
Sbjct: 297 AVRMLQDGCQLRVNERM 313
>gi|339249059|ref|XP_003373517.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970336|gb|EFV54297.1| conserved hypothetical protein [Trichinella spiralis]
Length = 747
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
E +V+DFEATCD+ + PQEIIEFP V S I++ F +YVRP P L+ FC
Sbjct: 551 LENLLVLDFEATCDQPIQIEPQEIIEFPCVNFSLKEDRIVSQFHSYVRPEVHPNLSSFCT 610
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTWSDWDCQVMLESECR 116
LTGI Q V+N TL E L D WL + L +++VT WD L ++C+
Sbjct: 611 NLTGIVQDMVNNQPTLTEVLTQFDGWLAEQQLLTDEQRDKWTMVTCGSWDLNYQLRNQCK 670
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P YF WIN++ G+ +L ++ G+ +GR+H G+DD NI R +
Sbjct: 671 WMGHPVPLYFKSWINIKKIACNATGNYPKSLIAMMQSLGVEHEGRLHSGIDDVKNIVRTV 730
Query: 177 SVIMRRGFKFSITKS 191
+ RR F +T S
Sbjct: 731 QELKRRKQPFYVTDS 745
>gi|401422814|ref|XP_003875894.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492134|emb|CBZ27408.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 584
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 25/215 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC+ +R + E+IEFP V+V + +A FQ YVRP P+L+ FC
Sbjct: 55 FDAYVVLDFEATCEADRRIADAEVIEFPMVLVDARTATPVAEFQRYVRPVKNPVLSRFCT 114
Query: 61 ELTGIQQHQVDN----GITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLE 112
ELTGI Q V + EAL F L + GL + ++ VVT DWD + ML
Sbjct: 115 ELTGITQDMVRGRDPFPMVYCEALQF----LAEAGLGDAPPMRSYCVVTCGDWDLKTMLP 170
Query: 113 SECRIKKIQ-KPAYFNQWINLRVPFSKVFGDVRCN------------LKEAVELAGLIWQ 159
++ R+ Q P F +W NL+ S++ + + +++ GL Q
Sbjct: 171 AQLRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGGGGPAPPLGLSWIPDMLQMVGLPMQ 230
Query: 160 GRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
GR H G+DD N+A +L ++RRG +T S TP
Sbjct: 231 GRHHSGIDDCRNLAAVLCALLRRGLVIDVTFSSTP 265
>gi|66472518|ref|NP_001018450.1| 3'-5' exoribonuclease 1 [Danio rerio]
gi|63100708|gb|AAH95343.1| Exoribonuclease 1 [Danio rerio]
gi|182888732|gb|AAI64140.1| Eri1 protein [Danio rerio]
Length = 337
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHP---QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y V+DFEATC E N P EIIEFP V++ + EI+ FQ YV+P P L++
Sbjct: 115 FDYICVVDFEATC--EENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSE 172
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC +LTGI Q VD T + L WL + L + +T WD L ++C+
Sbjct: 173 FCVKLTGITQEMVDEAKTFHQVLKRAISWLQEKELGTKYKYMFLTDGSWDMGKFLHTQCK 232
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKE--AVELAGLIWQGRVHCGLDDAINIAR 174
+ +I+ P + +WIN+R + + R K +E G+ + GR HCGLDD+ NIAR
Sbjct: 233 LSRIRYPQFARKWINIRKSYGNFYKVPRTQTKLICMLENLGMEYDGRPHCGLDDSRNIAR 292
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + L
Sbjct: 293 IAIHMLKDGCQLRVNECL 310
>gi|328768674|gb|EGF78720.1| hypothetical protein BATDEDRAFT_32150, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 265
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ Y+V D EATCD + E+IEFP + + G + E ++ F+ Y RP P LTDFC
Sbjct: 78 YRIYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRPILHPTLTDFC 137
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM-----GLNNTNFSVVTWSD--WDCQVMLE 112
K+ TGI Q Q D +W+L + G++ V+ +D WD + LE
Sbjct: 138 KQFTGITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDLRDFLE 197
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
E IQ+P + + IN+R +++++G + NL ++ G++++GR HCG DDA N+
Sbjct: 198 KEFIYSNIQRPDFMRKIINIRSLYTELYGKEKTNLDGMLKGLGMVFEGREHCGFDDASNV 257
Query: 173 ARLL 176
AR+L
Sbjct: 258 ARIL 261
>gi|348521266|ref|XP_003448147.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oreochromis niloticus]
Length = 341
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC+++ LH EIIEFP V+++ + EI+ FQ YV+P P L+D
Sbjct: 119 YDYICVVDFEATCEEDNPSDFLH--EIIEFPMVLINTHTLEIVDTFQEYVKPELNPQLSD 176
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC +LTGI Q VD L WL + L ++++T WD L +CR
Sbjct: 177 FCVKLTGITQKMVDEADPFPVVLQRVVSWLQERELGTKYKYAILTDGSWDMSKFLNIQCR 236
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ +I+ P + +WIN+R + + R L +E GL ++GR H GLDD+ NIAR
Sbjct: 237 VSRIKYPPFAKKWINIRKSYGNFYKVPRTQTKLSTMLEKLGLTYEGRPHSGLDDSRNIAR 296
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 297 IAVRMLQDGCQLRVNERM 314
>gi|261327259|emb|CBH10235.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 452
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 12/226 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ + + +P EIIE P V+V G + F++YVRP PLLT F
Sbjct: 141 FDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRRGVVDKERSFRSYVRPQRNPLLTPF 200
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK LTGI Q VD+ TL E + ++W + ++ T WD + + ++
Sbjct: 201 CKALTGITQEDVDSAPTLQEVVKLFEQWYTETIPRGAKVALATDGPWDLKNFVHEHSILR 260
Query: 119 K-IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P F +++++R F+ F L +E L ++GR HCG DDA+NIARL
Sbjct: 261 DHISFPTIFYEYLDIRTTFAHFFNRGTPLKLVPMLERLQLTFEGREHCGFDDAVNIARLA 320
Query: 177 SVIMRRG--FKFSITKSLTPQAN---PNCLTWNRHH---FLEPQAM 214
+MR G F + + LT + + PN + R +L+P +
Sbjct: 321 VSMMRAGCVFNYLVAIPLTDEFHYDMPNTALYRRKEGSGYLDPDVV 366
>gi|327279889|ref|XP_003224688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Anolis carolinensis]
Length = 343
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y VIDFEATC++ L EIIEFP V+++ + EI FQ YV+P P L+DFC
Sbjct: 122 YDYICVIDFEATCEEGNQLEFTHEIIEFPIVLINTRTLEIEDTFQQYVKPVINPQLSDFC 181
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q +VD + L W+ Q L + +++++T WD L +CR+
Sbjct: 182 INLTGISQERVDKADEFPKVLQSVIDWMKQKELGSRYSYAILTDGSWDMSKFLNIQCRVN 241
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ PA+ +WIN+R + + R L +E G+ + GR H GLDD+ NIA++
Sbjct: 242 RLRYPAFAKKWINIRKSYGNFYKVPRNQTKLSTMLEKLGMDYDGRPHSGLDDSRNIAQIA 301
Query: 177 SVIMRRGFKFSITKSL 192
+++ G + + ++L
Sbjct: 302 IRMLQDGCELRVNETL 317
>gi|72387357|ref|XP_844103.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360611|gb|AAX81022.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800635|gb|AAZ10544.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 452
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 12/226 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ + + +P EIIE P V+V G + F++YVRP PLLT F
Sbjct: 141 FDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRRGVVDKERSFRSYVRPQRNPLLTPF 200
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK LTGI Q VD+ TL E + ++W + ++ T WD + + ++
Sbjct: 201 CKALTGITQEDVDSAPTLQEVVKLFEQWYTETIPRGAKVALATDGPWDLKNFVHEHSILR 260
Query: 119 K-IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P F +++++R F+ F L +E L ++GR HCG DDA+NIARL
Sbjct: 261 DHISFPTIFYEYLDIRTTFAHFFNRGTPLKLVPMLERLQLTFEGREHCGFDDAVNIARLA 320
Query: 177 SVIMRRG--FKFSITKSLTPQAN---PNCLTWNRHH---FLEPQAM 214
+MR G F + + LT + + PN + R +L+P +
Sbjct: 321 VSMMRAGCVFNYLVAIPLTDEFHYDMPNTALYRRKEGSGYLDPDVV 366
>gi|398015969|ref|XP_003861173.1| phosphotransferase, putative [Leishmania donovani]
gi|322499398|emb|CBZ34471.1| phosphotransferase, putative [Leishmania donovani]
Length = 570
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 112/215 (52%), Gaps = 25/215 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC+++R + E+IEFP ++V + +A FQ YVRP P+L+ FC
Sbjct: 55 FDAYVVLDFEATCEEDRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVKNPVLSRFCT 114
Query: 61 ELTGIQQHQVDN----GITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLE 112
ELTGI Q V + EAL F L + GL + ++ VVT DWD + ML
Sbjct: 115 ELTGITQDMVSGRDPFPVVYCEALQF----LAEAGLGDAPPMRSYCVVTCGDWDLKTMLP 170
Query: 113 SECRIKKIQ-KPAYFNQWINLRVPFSKVFGDVR------------CNLKEAVELAGLIWQ 159
++ R+ Q P F +W NL+ S++ + + +++ GL Q
Sbjct: 171 AQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQMLGLPLQ 230
Query: 160 GRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
GR H G+DD N+ +L ++RRG +T S P
Sbjct: 231 GRHHSGIDDCRNLTAVLCALLRRGLVIDVTFSTAP 265
>gi|403307233|ref|XP_003944109.1| PREDICTED: uncharacterized protein LOC101050958 [Saimiri
boliviensis boliviensis]
Length = 745
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 523 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTRLSD 580
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 581 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 640
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
I +I+ P++ +WIN+R + + R K A+ E G+ + GR HCGLDD+ NIAR
Sbjct: 641 ISRIKYPSFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMDYDGRPHCGLDDSKNIAR 700
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 701 IAVRMLQDGCELRINEKM 718
>gi|146087811|ref|XP_001465911.1| putative phosphotransferase [Leishmania infantum JPCM5]
gi|134070012|emb|CAM68342.1| putative phosphotransferase [Leishmania infantum JPCM5]
Length = 570
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 111/215 (51%), Gaps = 25/215 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YVV+DFEATC+ +R + E+IEFP ++V + +A FQ YVRP P+L+ FC
Sbjct: 55 FDAYVVLDFEATCEADRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVKNPVLSRFCT 114
Query: 61 ELTGIQQHQVDN----GITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLE 112
ELTGI Q V + EAL F L + GL + ++ VVT DWD + ML
Sbjct: 115 ELTGITQDMVSGRDPFPVVYCEALQF----LAEAGLGDAPPMRSYCVVTCGDWDLKTMLP 170
Query: 113 SECRIKKIQ-KPAYFNQWINLRVPFSKVFGDVR------------CNLKEAVELAGLIWQ 159
++ R+ Q P F +W NL+ S++ + + +++ GL Q
Sbjct: 171 AQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQMLGLPLQ 230
Query: 160 GRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
GR H G+DD N+ +L ++RRG +T S P
Sbjct: 231 GRHHSGIDDCRNLTAVLCALLRRGLVIDVTFSTAP 265
>gi|402854302|ref|XP_003891813.1| PREDICTED: ERI1 exoribonuclease 3 [Papio anubis]
Length = 458
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 240 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 298
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 299 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 358
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+ YF QWINL+ +S G + ++ + + L + GR H G+ ++ I
Sbjct: 359 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIGQSLRI 413
>gi|296221910|ref|XP_002756956.1| PREDICTED: 3'-5' exoribonuclease 1 [Callithrix jacchus]
Length = 348
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 126 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTRLSD 183
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T L W+ L +S++T WD L +C+
Sbjct: 184 FCISLTGITQDQVDRADTFPHVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 243
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
I +I+ P++ +WIN+R + + R K A+ E G+ + GR HCGLDD+ NIAR
Sbjct: 244 ISRIKYPSFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMDYDGRPHCGLDDSKNIAR 303
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 304 IAVRMLQDGCELRINEKM 321
>gi|297698262|ref|XP_002826233.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pongo abelii]
Length = 691
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 19/211 (9%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y +VIDFE+TC + ++ H QEIIEFP+V+++ +G+I + FQ YV+P P+L++FC
Sbjct: 34 FDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQPQEHPILSEFC 93
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWS 103
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWS
Sbjct: 94 MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSEVKLCAFVTWS 153
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRV-PFSKVFGDVRCN-LKEAVELAGLIWQGR 161
DWD V LE EC+ K++ K + + ++R +++F + L A++ G+ + GR
Sbjct: 154 DWDLGVCLEYECKRKQLFKTSEKSLKDDIRAKSTARLFYRRKPKGLSGALQEVGIEFSGR 213
Query: 162 VHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
H GLDD+ N + L ++R G IT+SL
Sbjct: 214 EHSGLDDSRNTSLLAWKMIRDGCVMKITRSL 244
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR C YF+W T
Sbjct: 598 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRK--CGYFKWEQT 642
>gi|321468566|gb|EFX79550.1| hypothetical protein DAPPUDRAFT_4269 [Daphnia pulex]
Length = 199
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 1 FEYYVVIDFEATCDKERN-LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y+V+IDFE TC +N QEIIEFP+++++G +G I F ++ +P P LT+FC
Sbjct: 2 FDYFVIIDFEGTCGFLKNPCGIQEIIEFPAILLNGHNGSIEDEFHSFCQPVLNPSLTNFC 61
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--NFSVVTWSDWDCQVMLESECRI 117
K+LTGI Q VD + ++WL + + + +F+VVT D + L+ +CRI
Sbjct: 62 KKLTGITQDAVDKAPLFKDVFVSFEEWLKKNKVIGSYYSFAVVTDDPNDIRQFLQKQCRI 121
Query: 118 KKIQKPAYFNQWINLRVPFSKVF--GDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+I P Y WIN+++ F+ + G+++C +LK + G +QGR H G+DDA NIA
Sbjct: 122 SEIDFPTYCQNWINIKIIFAHFYKNGNMQCLSLKNMIRDIGCEFQGRAHSGIDDARNIAS 181
Query: 175 LLSVIM 180
++ ++
Sbjct: 182 IVQRLL 187
>gi|405958600|gb|EKC24712.1| 3'-5' exoribonuclease 1 [Crassostrea gigas]
Length = 405
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y ++IDFEATC + + EIIEFP+V+V + EI+ F + +P P LT+FC
Sbjct: 149 YDYLIIIDFEATCQENNLNYNHEIIEFPAVLVDCHTREIVDEFHEFCKPIINPRLTEFCC 208
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQ--MGLNNTNFSVVTWSDWDCQVMLESECRIK 118
LTGI Q VD L + W+ +G+++T F+VVT WD L+ +C
Sbjct: 209 GLTGITQDVVDKADEFPAVLERMESWMSSHYLGVDHT-FAVVTDGPWDMSRFLQMQCNFS 267
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
KI P + +WIN+R +S + R NL+E + GL +QG HCGL D+ NIAR+
Sbjct: 268 KIHFPHWGKKWINIRKAYSSYYSCKRMNLEEMLINLGLKFQGTQHCGLHDSRNIARIAIQ 327
Query: 179 IMRRG 183
++ G
Sbjct: 328 LLNDG 332
>gi|387015830|gb|AFJ50034.1| 3'-5' exoribonuclease 1-like [Crotalus adamanteus]
Length = 338
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y VIDFEATC+ E+N P+ EIIEFP V+++ + +I FQ YV+P P L+D
Sbjct: 117 YNYICVIDFEATCE-EKN-QPEFIHEIIEFPIVLLNTQTLQIEDTFQQYVKPEINPQLSD 174
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q V+ + L W+ Q L + ++S++T WD L +CR
Sbjct: 175 FCINLTGISQELVEKADEFPKVLQRVVDWMKQKELGSKYSYSILTDGSWDMSKFLNIQCR 234
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRC--NLKEAVELAGLIWQGRVHCGLDDAINIAR 174
I +++ P++ +WIN+R + + RC L +E G+ + GR H GLDD+ NIAR
Sbjct: 235 ISRLKYPSFAKKWINIRKSYGNFYKVPRCQTKLSTMLEKLGMDYDGRPHSGLDDSKNIAR 294
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + L
Sbjct: 295 IAIRMLQDGCELRVNERL 312
>gi|321478169|gb|EFX89127.1| hypothetical protein DAPPUDRAFT_41461 [Daphnia pulex]
Length = 231
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 18/208 (8%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+YYVVID+EATCD+ N + QEIIEFP+V+++ +G++ A FQ+Y RP PLLT
Sbjct: 26 FDYYVVIDYEATCDENHNNFDKNNQEIIEFPAVLLNCHTGKVEAEFQSYCRPVINPLLTK 85
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
+C +LTGI Q+ VD + + L +KWL + L + +F+++T D L+ +C
Sbjct: 86 YCIKLTGITQNIVDKAPSFHDVLASFEKWLQKKKLGSEYSFAILTDGSKDVGHFLKRQCV 145
Query: 117 IKKIQKPAYFNQWINLRVPFSKVF------------GDVRCNLKEAVELAGLIWQGRVHC 164
+ +I P Y WIN+R F+ + D N+ ++ G +QG+ H
Sbjct: 146 LSQIDIPEYCKYWINIRKSFTNFYQTNDLQYFARLANDTVLNI--MIKEIGCKFQGKPHS 203
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDDA NIA + +++ G + L
Sbjct: 204 GLDDARNIAYVAQCLLQDGASLVFNEKL 231
>gi|444721415|gb|ELW62152.1| ERI1 exoribonuclease 3 [Tupaia chinensis]
Length = 349
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 163 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 221
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 222 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 281
Query: 119 KIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+ YF QWINL+ +S G + ++ + + L + GR H G+ ++++
Sbjct: 282 GLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIGQFLHMS 337
>gi|345322776|ref|XP_001508919.2| PREDICTED: 3'-5' exoribonuclease 1-like [Ornithorhynchus anatinus]
Length = 387
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y VIDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 165 YDYICVIDFEATC--EEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSD 222
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L +W+ Q L +S++T WD L +CR
Sbjct: 223 FCINLTGITQDVVDRADTFPQVLQKVVEWMRQKELGTKYKYSILTDGSWDMSKFLTIQCR 282
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
I ++ PA+ +WIN+R + + R K A+ E G+ + GR H GLDD+ NIAR
Sbjct: 283 ISHLKYPAFAKKWINIRKSYGNFYKVPRSQTKLAIMLEKLGMSYAGRPHSGLDDSKNIAR 342
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 343 IAVRMLQDGCQLRVNEKM 360
>gi|326925262|ref|XP_003208837.1| PREDICTED: ERI1 exoribonuclease 3-like [Meleagris gallopavo]
Length = 484
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 162 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 220
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV--VTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + + VT DWD +VML +C+
Sbjct: 221 ELTGIIQGMVDGQPSLQQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKVMLPGQCQYL 280
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAI 170
+ YF QWINL+ +S G + L + + L GR H G++ +
Sbjct: 281 GLPVADYFKQWINLKKAYSFAMGSWPKNGLLDMNKGLNLQHIGRPHSGIEKEL 333
>gi|389601394|ref|XP_001565349.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505025|emb|CAM42259.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 575
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 112/209 (53%), Gaps = 19/209 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ Y+V+D EATC+ R + E+IEFP V+V + +A FQ YVRP P+L+ FC
Sbjct: 49 FDAYIVLDLEATCEAGRRITDAEVIEFPMVLVDPRTATQVAEFQRYVRPVKNPMLSRFCT 108
Query: 61 ELTGIQQHQVDN----GITLGEALYFHDKWLLQMGLNNT----NFSVVTWSDWDCQVMLE 112
ELTGI Q+ V + + EAL F L + GL + ++ VVT DWD + ML
Sbjct: 109 ELTGITQNMVSHRDPFPVVYCEALQF----LAEAGLGDAPPLRSYCVVTCGDWDLKTMLP 164
Query: 113 SECRIKKIQ-KPAYFNQWINLRVPFSKVF---GDVR---CNLKEAVELAGLIWQGRVHCG 165
S+ RI Q P F +W NL+ S + G R ++ + + + GL QGR H G
Sbjct: 165 SQIRISGQQGTPLSFQRWCNLKKYMSGLGLRDGGERGGPTDMPDMLRILGLPHQGRHHSG 224
Query: 166 LDDAINIARLLSVIMRRGFKFSITKSLTP 194
+DD NIA +L +++RG T + P
Sbjct: 225 IDDCRNIAAVLCALLKRGLVVDTTFATEP 253
>gi|340720676|ref|XP_003398758.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus terrestris]
Length = 623
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFE TC K + PQEIIEFP VS S E+ F Y++P + P LT FC
Sbjct: 413 FNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKPKYHPQLTPFCT 472
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VDN + E WL + + N + VT DWD + ML S+C ++
Sbjct: 473 ELTGIIQDLVDNQLYFPEVFGTFCNWLEEHKYFKDGNNSAFVTCGDWDLKFMLPSQCELE 532
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F +WINL+ F NL + + L G++H G+ D N+ +++
Sbjct: 533 NISLPKQFMKWINLKGSFCDATDHYPRNLTDMLSHLNLPLVGKLHSGISDVKNMVQIIQA 592
Query: 179 I 179
+
Sbjct: 593 L 593
>gi|395835562|ref|XP_003790746.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 657
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 25 IEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHD 84
IEFP+V+++ +G+I + F YV+P P+L++FC ELTGI+Q QVD G L L
Sbjct: 31 IEFPAVLLNTSTGDIESEFHAYVQPQEHPILSEFCMELTGIKQAQVDEGAPLKICLSQFC 90
Query: 85 KWL----------LQMGLNNTNFS------VVTWSDWDCQVMLESECRIKKIQKPAYFNQ 128
KW+ G++ + S VTWSDWD V LE EC+ K++ KP + N
Sbjct: 91 KWIHNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNS 150
Query: 129 WINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSI 188
WI+LR + + L A++ G+ + GR H GLDD+ N A L ++R G + I
Sbjct: 151 WIDLRAIYKLFYRRKPKGLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCQMKI 210
Query: 189 TKSL---TPQANPNCLTWN 204
T+SL + + NP L N
Sbjct: 211 TRSLNKVSAKKNPRILATN 229
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + R CC+YF+W T
Sbjct: 563 CKCGRRSKRLLVSNNGPNHGKVFYCCPIGKFQEKR-KCCDYFKWEET 608
>gi|324519006|gb|ADY47259.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC++ + P QEIIEFP V + + +A F YV PT P+LT FC
Sbjct: 66 FDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPVLTSFC 125
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--------NFSVVTWSDWDCQVML 111
LTGI Q VDN + L + L +WL Q L + +++ VT DWD +L
Sbjct: 126 TNLTGIVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGDWDLGTIL 185
Query: 112 ESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
E + + P YF WINL+ + G +L + + GR+H G+DD IN
Sbjct: 186 PQEASFRGLHLPPYFGSWINLKKAYRNAKGYFPNSLMVMLNDLQIPHTGRLHSGIDDVIN 245
Query: 172 IARLLSVIMRRGFKFSITKSLT 193
I ++ + G+ T LT
Sbjct: 246 ICAIVRKLCEDGYLLENTSYLT 267
>gi|256080349|ref|XP_002576444.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645552|emb|CCD59792.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 224
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 104/189 (55%), Gaps = 14/189 (7%)
Query: 8 DFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
+FE+TC ++ P EIIEFP V++ V+G +I FQ++V+PT P L+ FC LTGIQQ
Sbjct: 28 NFESTCFEDDIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENPELSVFCSNLTGIQQ 87
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLN--------NTNFSVVTWSDWDCQVMLESECRIKK 119
V+N TL L + WL + N T+ VTW+DWD L ECR KK
Sbjct: 88 CDVENAPTLAVVLRKFEHWLRKAKENLGCSFKGQPTSAIFVTWTDWDISTCLWDECRRKK 147
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV------RCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+ P I+L+ F + G R LK+A+ L GL ++GR H G+DDA N +
Sbjct: 148 LPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDALNLIGLHFEGRPHRGIDDARNTS 207
Query: 174 RLLSVIMRR 182
RLL ++ +
Sbjct: 208 RLLLHLLSK 216
>gi|332244613|ref|XP_003271468.1| PREDICTED: 3'-5' exoribonuclease 1 [Nomascus leucogenys]
Length = 349
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR+HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRLHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|324520531|gb|ADY47658.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC++ + P QEIIEFP V + + +A F YV PT P+LT FC
Sbjct: 66 FDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPVLTSFC 125
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT--------NFSVVTWSDWDCQVML 111
LTGI Q VDN + L + L +WL Q L + +++ VT DWD +L
Sbjct: 126 TNLTGIVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGDWDLGTIL 185
Query: 112 ESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
E + + P YF WINL+ + G +L + + GR+H G+DD IN
Sbjct: 186 PQEASFRGLHLPPYFGSWINLKKAYRNAKGYFPNSLMVMLNDLQIPHTGRLHSGIDDVIN 245
Query: 172 IARLLSVIMRRGFKFSITKSLT 193
I ++ + G+ T LT
Sbjct: 246 ICAIVRKLCEDGYLLENTSYLT 267
>gi|301603560|ref|XP_002931486.1| PREDICTED: ERI1 exoribonuclease 3 [Xenopus (Silurana) tropicalis]
Length = 338
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F TYV+P P LT FC
Sbjct: 127 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHTYVQPVVHPQLTPFCT 185
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD TL + L D+W+ + GL + + VT DWD ++ML +C
Sbjct: 186 ELTGIIQDMVDGQPTLSQVLERVDEWMAKEGLLDPSVKSIFVTCGDWDLKLMLPGQCEYL 245
Query: 119 KIQKPAYFNQWINLR 133
+Q YF QWINL+
Sbjct: 246 GLQVADYFKQWINLK 260
>gi|449500377|ref|XP_002196066.2| PREDICTED: 3'-5' exoribonuclease 1-like [Taeniopygia guttata]
Length = 355
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC E P+ EIIEFP V+V+ + EI FQ YV+P P L+D
Sbjct: 133 YDYICVVDFEATC--EEGNPPEFVHEIIEFPVVLVNTRTLEIEDTFQQYVKPEINPKLSD 190
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD + L +W+ Q L ++S++T WD L ++CR
Sbjct: 191 FCISLTGITQDIVDKADIFPQVLQNVIEWMRQRELGTKYSYSMLTDGSWDMSKFLNTQCR 250
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELA--GLIWQGRVHCGLDDAINIAR 174
I +I+ P++ +WIN+R + + R K + L G+ + GR H GLDD+ NIAR
Sbjct: 251 ISRIKYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLENLGMNYDGRPHSGLDDSKNIAR 310
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + +
Sbjct: 311 IAIRMLQDGCDLRVNERI 328
>gi|383849952|ref|XP_003700597.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Megachile rotundata]
Length = 609
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFE+TC++ + PQEIIEFP VS + I F YV+P P LT FC
Sbjct: 420 FNYLLVVDFESTCERYVKMQPQEIIEFPCAAVSTRTWNIENVFHEYVKPKINPELTPFCT 479
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VDN E KW+ + N VT DWD + ML +C++
Sbjct: 480 ELTGIIQDMVDNQPHFPEVFDKFCKWIEEHNYFTEGNNCVYVTCGDWDMKSMLPQQCKLD 539
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F +WINL+ F V +LK+ + L GR+H G++D N+ R++
Sbjct: 540 NIPVPDHFQKWINLKNIFCDVTQYYPRSLKDMLAFLKLPLHGRLHSGINDVENMVRIIQA 599
Query: 179 IMRR 182
+ +
Sbjct: 600 LQAK 603
>gi|126330776|ref|XP_001373310.1| PREDICTED: 3'-5' exoribonuclease 1-like [Monodelphis domestica]
Length = 432
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y VIDFEATC++ EIIEFP V+++ + EI FQ YVRP L+DFC
Sbjct: 210 YDYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFC 269
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q VD T + L +W+ L T +S++T WD L +C+I
Sbjct: 270 ISLTGITQDMVDRAATFPQVLRNVVEWMKLKELGTTYKYSILTDGSWDMSKFLNIQCQIS 329
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIARLL 176
+++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR+
Sbjct: 330 RLRYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEKLGMSYDGRPHSGLDDSKNIARIA 389
Query: 177 SVIMRRGFKFSITKSL 192
++R G + + + +
Sbjct: 390 VRMLRDGCELRVNEKM 405
>gi|297682312|ref|XP_002818868.1| PREDICTED: 3'-5' exoribonuclease 1 [Pongo abelii]
Length = 349
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|402877563|ref|XP_003902493.1| PREDICTED: 3'-5' exoribonuclease 1 [Papio anubis]
Length = 349
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKI 322
>gi|380790199|gb|AFE66975.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|383422639|gb|AFH34533.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|384944050|gb|AFI35630.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKI 322
>gi|355779519|gb|EHH63995.1| 3'-5' exoribonuclease 1 [Macaca fascicularis]
Length = 349
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKI 322
>gi|426358763|ref|XP_004046664.1| PREDICTED: 3'-5' exoribonuclease 1 [Gorilla gorilla gorilla]
Length = 349
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|355697746|gb|EHH28294.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKI 322
>gi|345487306|ref|XP_003425664.1| PREDICTED: ERI1 exoribonuclease 3-like [Nasonia vitripennis]
Length = 225
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTG 64
+V+DFEATC K+ L PQEIIEFP +VVS ++ F YV+P P L+DFC ELTG
Sbjct: 27 LVLDFEATCVKDVILKPQEIIEFPCLVVSTEDWQVKDAFHEYVKPRINPKLSDFCTELTG 86
Query: 65 IQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
I Q ++N E W+ + VT DWD +VML S+C + I
Sbjct: 87 IMQETLENEEHFPEVFSKFCSWIEDGNYFDEKDKSAFVTCGDWDLKVMLPSQCELDNINV 146
Query: 123 PAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
P Y +WINL+ F + +L + + + +QG+ HCG+DD N+ R++ + +
Sbjct: 147 PDYLKEWINLKSSFCLMTKYYPRSLADMLRHLNMKFQGKNHCGIDDVHNMTRVIQKLADK 206
>gi|114623463|ref|XP_001136735.1| PREDICTED: 3'-5' exoribonuclease 1 isoform 1 [Pan troglodytes]
gi|410057587|ref|XP_003954240.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan troglodytes]
gi|410216504|gb|JAA05471.1| exoribonuclease 1 [Pan troglodytes]
gi|410253534|gb|JAA14734.1| exoribonuclease 1 [Pan troglodytes]
gi|410287450|gb|JAA22325.1| exoribonuclease 1 [Pan troglodytes]
gi|410333459|gb|JAA35676.1| exoribonuclease 1 [Pan troglodytes]
Length = 349
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|449278956|gb|EMC86684.1| Exonuclease domain-containing protein 1, partial [Columba livia]
Length = 186
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 16/184 (8%)
Query: 25 IEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHD 84
+EFP+V+++ +GEI A F TYV+P P+L+DFCKELTGI Q QVD + L L
Sbjct: 1 VEFPAVLLNTATGEIEAEFHTYVQPQKHPVLSDFCKELTGITQSQVDEAVPLNICLSQFW 60
Query: 85 KWLLQMGLNNTNF----------------SVVTWSDWDCQVMLESECRIKKIQKPAYFNQ 128
KW+ ++ + VTW+DWD V L+ EC+ K+++KP N
Sbjct: 61 KWIQKIQREKKIIFSSDIPSHSTSEAKLCTFVTWTDWDLGVCLQYECKRKQLRKPDILNS 120
Query: 129 WINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSI 188
WI+L+ + + L A++ G+ + GR H GLDD+ N ARL ++ G +
Sbjct: 121 WIDLKATYRTFYNRKPKGLSGALQDLGIAFAGREHSGLDDSRNTARLAWRLICDGCVLKV 180
Query: 189 TKSL 192
TKSL
Sbjct: 181 TKSL 184
>gi|241686335|ref|XP_002411687.1| exonuclease, putative [Ixodes scapularis]
gi|215504479|gb|EEC13973.1| exonuclease, putative [Ixodes scapularis]
Length = 337
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC +E+ HPQEIIEFP + V+G S ++ + F YV+P L+ FC
Sbjct: 103 FDYFLVLDFEATCSREKPPPHPQEIIEFPVLKVNGRSFQVESTFHQYVQPRVHRELSSFC 162
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGL---NNTNFSVVTWSDWDCQVMLESECR 116
ELTGI Q VD E L +W+ GL + VT+ DWD Q ML S+C
Sbjct: 163 TELTGIIQDMVDEQPFFEEVLEKFHQWMCSEGLLGPPEKRVAFVTFGDWDLQKMLPSQCS 222
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGL 166
KI P Y WINL+ F + G L E +E L GR H G+
Sbjct: 223 YFKIPVPEYLTSWINLKKAFVEATGHWPKTLPETLEYCRLEQVGRHHSGI 272
>gi|343958098|dbj|BAK62904.1| histone mRNA 3'-exonuclease 1 [Pan troglodytes]
Length = 271
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 49 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 106
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L +W+ L +S++T WD L +C+
Sbjct: 107 FCISLTGITQDQVDRADTFPQVLKKVIEWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 166
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 167 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 226
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 227 IAVRMLQDGCELRINEKM 244
>gi|158255560|dbj|BAF83751.1| unnamed protein product [Homo sapiens]
gi|261858590|dbj|BAI45817.1| exoribonuclease 1 [synthetic construct]
Length = 349
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|397467350|ref|XP_003805385.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan paniscus]
Length = 345
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 123 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 180
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 181 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 240
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 241 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 300
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 301 IAVRMLQDGCELRINEKM 318
>gi|449270665|gb|EMC81322.1| 3'-5' exoribonuclease 1, partial [Columba livia]
Length = 312
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC E P+ EIIEFP V+++ + EI FQ YV+P P L++
Sbjct: 90 YDYICVVDFEATC--EEGNPPEFVHEIIEFPVVLLNTRTLEIEDTFQQYVKPEINPKLSN 147
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L +W+ Q L +S++T WD L +CR
Sbjct: 148 FCINLTGITQEVVDKADTFPQVLQNVIEWMRQWELGTKYTYSMLTDGSWDMSKFLNIQCR 207
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
I +I+ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 208 ISRIKYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEQLGMNYDGRPHSGLDDSKNIAR 267
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 268 IAIRMLQDGCELRVNEQM 285
>gi|161612020|gb|AAI55978.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
gi|161612114|gb|AAI55988.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y VIDFEATC++ + + EIIEFP V+++ + EI FQ YVRP P L++FC
Sbjct: 123 YDYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFC 182
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q VD + L W+ + L ++++T WD L +CR+
Sbjct: 183 VNLTGITQDIVDKSDIFPDVLRSVVDWMREKELGTKYKYAILTDGSWDMSKFLNMQCRVS 242
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLK--EAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ P + +WIN+R + + R K +E G+ + GR+H G+DD+ NIAR+
Sbjct: 243 RLKYPRFAKKWINIRKSYGNFYKVPRTQTKLTTMLEKLGMTYDGRLHSGVDDSKNIARIA 302
Query: 177 SVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 303 AHMLQDGCELRVNERM 318
>gi|31543184|ref|NP_699163.2| 3'-5' exoribonuclease 1 [Homo sapiens]
gi|45476938|sp|Q8IV48.3|ERI1_HUMAN RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-end-specific exoribonuclease;
AltName: Full=Histone mRNA 3'-exonuclease 1; AltName:
Full=Protein 3'hExo; Short=HEXO
gi|23271401|gb|AAH35279.1| Exoribonuclease 1 [Homo sapiens]
gi|33520761|gb|AAQ21219.1| 3' exoribonuclease [Homo sapiens]
gi|119585973|gb|EAW65569.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|119585974|gb|EAW65570.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|123979876|gb|ABM81767.1| three prime histone mRNA exonuclease 1 [synthetic construct]
gi|123994641|gb|ABM84922.1| three prime histone mRNA exonuclease 1 [synthetic construct]
Length = 349
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|342180402|emb|CCC89879.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 382
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F+Y +V+D EATCD +P EIIE P V+V G + F +YVRP P+LT F
Sbjct: 67 FDYLIVVDVEATCDDNSKNYPHEIIELPGVLVDVRRGIVDKQRSFHSYVRPRRNPILTPF 126
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ-VMLESECRI 117
CK LTGI+Q VD +L E + ++W ++ + T WD + + E
Sbjct: 127 CKALTGIKQEDVDRAPSLPEVVKLFEEWYMETIPLGAKVVLATDGPWDLKNFVYEHSVLR 186
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F ++I++R FS F V L + L ++GR HCG DDA+NIARL
Sbjct: 187 DHVSFPTLFWEYIDIRTTFSNHFNRGVPIKLTAMLHRMHLEFEGRQHCGFDDAVNIARLA 246
Query: 177 SVIMRRG 183
+MR G
Sbjct: 247 VAMMRAG 253
>gi|350412671|ref|XP_003489724.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus impatiens]
Length = 618
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFE TC K + PQEIIEFP VS S E+ F Y++P + P LT FC
Sbjct: 413 FNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKPKYHPQLTPFCT 472
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q VDN E WL + + + + VT DWD + ML S+C ++
Sbjct: 473 ELTGIIQDLVDNQPYFPEVFGTFCNWLEEHKYFKDGNDSAFVTCGDWDLKFMLPSQCELE 532
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P F +WINL+ F NL + + L G++H G+ D N+ +++
Sbjct: 533 NISLPKQFMKWINLKGSFCDAVDHYPRNLTDMLLHLKLPLIGKLHSGMSDVENMVQIIQA 592
Query: 179 IMRR 182
+ R
Sbjct: 593 LQSR 596
>gi|390361519|ref|XP_781221.3| PREDICTED: ERI1 exoribonuclease 3-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 100/193 (51%), Gaps = 3/193 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y++V+DFEATC + PQE+IEFP + VSG + E A F YV P + +FC
Sbjct: 76 FDYFLVLDFEATCLDNERIEPQEVIEFPVLKVSGKTFETEATFHQYVEPQVHGV-GEFCT 134
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN--TNFSVVTWSDWDCQVMLESECRIK 118
LTGI V T + L W+ + GL + F VT DWD + M S+C
Sbjct: 135 RLTGITPDMVKGQPTFADTLKLFHVWMEKEGLVDPEVKFIFVTCGDWDLKTMFPSQCAHF 194
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ +YF +W+N++ F+ V + + +E + GR H G+DD NIA +L
Sbjct: 195 ELPYHSYFRRWLNIKKAFATVTSHYPKGMMQMLERLNIPHVGRHHSGIDDCRNIANILQA 254
Query: 179 IMRRGFKFSITKS 191
+ + +KF T S
Sbjct: 255 LALKRYKFKQTGS 267
>gi|119585972|gb|EAW65568.1| three prime histone mRNA exonuclease 1, isoform CRA_a [Homo
sapiens]
Length = 288
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 66 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 123
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 124 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 183
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR HCGLDD+ NIAR
Sbjct: 184 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIAR 243
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 244 IAVRMLQDGCELRINEKM 261
>gi|335307056|ref|XP_003360688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Sus scrofa]
Length = 525
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 303 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 360
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +CR
Sbjct: 361 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCR 420
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 421 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 480
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 481 IAVRMLQDGCELRVNEKM 498
>gi|344281397|ref|XP_003412466.1| PREDICTED: 3'-5' exoribonuclease 1-like [Loxodonta africana]
Length = 388
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 166 YDYICIIDFEATC--EEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSD 223
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 224 FCINLTGITQDQVDRADTFPQVLKKVTDWMKLKELGTKYKYSILTDGSWDMNKFLNIQCQ 283
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ ++GR H GLDD+ NIAR
Sbjct: 284 LSRLRYPPFAKRWINIRKSYGNFYKVPRSQTKLTIMLEKLGMSYEGRPHSGLDDSKNIAR 343
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 344 IAVRMLQDGCELRVNEKI 361
>gi|119627447|gb|EAX07042.1| prion protein interacting protein, isoform CRA_a [Homo sapiens]
Length = 213
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIK 118
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C+
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYL 183
Query: 119 KIQKPAYFNQWINLR 133
+ YF QWINL+
Sbjct: 184 GLPVADYFKQWINLK 198
>gi|395541883|ref|XP_003772866.1| PREDICTED: 3'-5' exoribonuclease 1 [Sarcophilus harrisii]
Length = 469
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y VIDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 247 YDYICVIDFEATC--EEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSD 304
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L W+ L +S++T WD L +C+
Sbjct: 305 FCINLTGITQDMVDRADTFPQVLRNVVDWMRLKELGTKYKYSILTDGSWDMSKFLNIQCQ 364
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
I +++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 365 ISRLRYPSFAKKWINIRKSYGNFYKVPRNQTKLTIMLEKLGMSYDGRPHSGLDDSKNIAR 424
Query: 175 LLSVIMRRGFKFSITKSL 192
+ ++R G + + + +
Sbjct: 425 IAVRMLRDGCELRVNEKM 442
>gi|410956121|ref|XP_003984693.1| PREDICTED: 3'-5' exoribonuclease 1 [Felis catus]
Length = 349
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKSKELGTKYKYCILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|320168778|gb|EFW45677.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 234
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFEA CD+ PQEIIEFP+VV+ + EI+ F YVRP P+LT FC
Sbjct: 11 FRYLLVLDFEAVCDEVTRPKPQEIIEFPTVVLDTTTLEIVGSFHKYVRPVSHPILTPFCT 70
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL----------------------LQMGLNNTNFS 98
LTGI Q V T E H W+ + ++
Sbjct: 71 TLTGITQDMVSGQATFQEVFDEHLAWIQSFWKSLPPAANADADAASTASSSIPSEAPTWA 130
Query: 99 VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIW 158
VT DWD L + + PA + QWIN++ F+ +G + +++ L
Sbjct: 131 FVTCGDWDLNRALPDQLAALGKKSPAPYRQWINIKKEFAVKYGVSPPGMTAMLDMLRLDL 190
Query: 159 QGRVHCGLDDAINIARLLSVIMRRGFKFSITKS 191
GR H G+DD NIA + ++R G F IT +
Sbjct: 191 VGRHHSGIDDCRNIAAVAKEMLRDGHVFEITGT 223
>gi|340052991|emb|CCC47277.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 434
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 6/199 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F++ +V+D EATC+++ + +P EIIE P V+V G I F++YVRP P+LTDF
Sbjct: 120 FDFLIVVDVEATCERKNDNYPHEIIELPGVLVDVRRGVIDKGRSFRSYVRPIINPILTDF 179
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ-VMLESECRI 117
CK LTGI Q VD L + + ++W + T WD + + E
Sbjct: 180 CKSLTGITQENVDGAPVLQDVVKLFEEWYRRTIPAGAKVVFATDGPWDLKNFVYEHSIMR 239
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P+ F +++++R F+ F + L++ + L ++GR H G DD++NIARL
Sbjct: 240 DHVRFPSIFYEYVDIRTTFANYFNKGKLIKLEDMLHRMNLQFEGRPHSGFDDSVNIARLA 299
Query: 177 SVIMRRG--FKFSITKSLT 193
+M+ G F + ++ LT
Sbjct: 300 LSMMKAGCVFNYLVSIPLT 318
>gi|73979366|ref|XP_539997.2| PREDICTED: 3'-5' exoribonuclease 1 [Canis lupus familiaris]
Length = 349
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|440896880|gb|ELR48688.1| 3'-5' exoribonuclease 1 [Bos grunniens mutus]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 305 IAVRMLQDGCELRVNEKM 322
>gi|241896984|ref|NP_001155946.1| exoribonuclease 1 [Acyrthosiphon pisum]
Length = 340
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F Y+VVID EATC + + EIIEFP+V+V +II FQ +V+P+ P L++FC
Sbjct: 92 FPYFVVIDIEATCTENNPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPSINPKLSEFC 151
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECRIK 118
+LTGI Q Q+DN + L KWL + L FS+VT +D L +C +
Sbjct: 152 IKLTGITQDQIDNADSFEVCLTRFTKWLEEHELGIKHKFSIVTDGPFDMARFLYGQCLMS 211
Query: 119 KIQKPAYFNQWINLRVPF------SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+I P + +WIN+R F +V V CNL + + ++G H GLDD+ NI
Sbjct: 212 EIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEFEGNPHSGLDDSFNI 271
Query: 173 ARLLSVIMRRG 183
+R+ ++ G
Sbjct: 272 SRICIRLLEDG 282
>gi|324515366|gb|ADY46181.1| 3'-5' exonuclease eri-1 [Ascaris suum]
Length = 402
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+EY+VV+DFE TC+ E + EIIEFP+V++ + I+ F ++VRP P L++FC
Sbjct: 147 YEYFVVMDFECTCEDEVYEYEHEIIEFPAVLIDVRNRRIVDTFHSHVRPRINPKLSEFCS 206
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLL--QMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
LTG+ Q VDN + + W+ ++G NN ++ VT WD + +C
Sbjct: 207 RLTGVTQEMVDNALPFVDVFDSFRMWMQSHRLGHNNARYAFVTDGPWDIAKFFQMQCLQS 266
Query: 119 KIQK-PAYFNQWINLRVPF----SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+ P F +IN+R F K + NL + G+ ++GR HCGLDD+ NIA
Sbjct: 267 GLGSVPHDFRHYINIRKAFLNKYLKGHHAQKTNLSGMLSELGMTFEGREHCGLDDSKNIA 326
Query: 174 RLLSVIMRRGFKFSITKSLT 193
R++ ++ + I + +
Sbjct: 327 RIVIRMLEDRSELRINERIA 346
>gi|84000359|ref|NP_001033281.1| 3'-5' exoribonuclease 1 [Bos taurus]
gi|81673840|gb|AAI09682.1| Three prime histone mRNA exonuclease 1 [Bos taurus]
gi|296472395|tpg|DAA14510.1| TPA: three prime histone mRNA exonuclease 1 [Bos taurus]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 305 IAVRMLQDGCELRVNEKM 322
>gi|355686523|gb|AER98084.1| exoribonuclease 1 [Mustela putorius furo]
Length = 348
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|152941094|gb|ABS44984.1| histone mRNA 3' end-specific exonuclease [Bos taurus]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 305 IAVRMLQDGCELRVNEKM 322
>gi|57530089|ref|NP_001006450.1| 3'-5' exoribonuclease 1 [Gallus gallus]
gi|53130526|emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus]
Length = 327
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 107/198 (54%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y V+DFEATC E P+ EIIEFP V+++ + EI FQ YV+P P L++
Sbjct: 105 YDYICVVDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINPKLSE 162
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L W+ Q L ++ ++T WD L +CR
Sbjct: 163 FCVGLTGITQDIVDKADTFPQVLQNVVDWMRQRELGTKYSYCMLTDGSWDMSKFLNIQCR 222
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +I+ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 223 VSRIKHPSFAKKWINIRKSYGNFYKVPRNQTKLMIMLEKLGMSYDGRPHSGLDDSKNIAR 282
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 283 IAIRMLQDGCQLRVNEKM 300
>gi|301787585|ref|XP_002929208.1| PREDICTED: 3'-5' exoribonuclease 1-like [Ailuropoda melanoleuca]
Length = 349
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKQVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|428181691|gb|EKX50554.1| hypothetical protein GUITHDRAFT_103781 [Guillardia theta CCMP2712]
Length = 656
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 105/209 (50%), Gaps = 46/209 (22%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEP-LLTDFC 59
F+Y VV+DFE TCD ++ L P EIIEFPSV+ VR +F P ++++F
Sbjct: 26 FDYLVVLDFEWTCDNKKKLEPLEIIEFPSVL---------------VRTSFPPKIVSEF- 69
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGL------NNTNFSVVTWSDWDCQVMLES 113
Q VD G+ L +A+ H +WL Q GL ++ F+ VTWSD D L S
Sbjct: 70 -------QEMVDAGVHLEDAIEMHRQWLEQHGLLPAEGAASSTFTFVTWSDADIMFALHS 122
Query: 114 ECRIKKIQKPAYFNQWINLRVPF----------------SKVFGDVRCNLKEAVELAGLI 157
E KI +P+YFN WINL+V S D L+ VE G+
Sbjct: 123 EFSRLKIARPSYFNNWINLKVSLPSLPHSLLSRQQLLYKSHFKKDAVGGLQACVERLGIS 182
Query: 158 WQGRVHCGLDDAINIARLLSVIMRRGFKF 186
+QGR H GL D+ N A ++ ++ GF+F
Sbjct: 183 FQGRAHSGLVDSRNTAAIVMKMLNEGFQF 211
>gi|426256336|ref|XP_004021796.1| PREDICTED: LOW QUALITY PROTEIN: 3'-5' exoribonuclease 1 [Ovis
aries]
Length = 337
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 115 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 172
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 173 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 232
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 233 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 292
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 293 IAVRMLQDGCELRVNEKM 310
>gi|355686536|gb|AER98088.1| exoribonuclease 3 [Mustela putorius furo]
Length = 176
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 20 HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA 79
HPQEIIEFP + ++G + EI + F YV+P P LT FC ELTGI Q VD +L +
Sbjct: 1 HPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQV 60
Query: 80 LYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
L D+W+ + GL + N VT DWD +VML +C+ + YF QWINL+ +S
Sbjct: 61 LERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS 120
Query: 138 KVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
G + ++ + + L + GR H G+DD NIA ++ + +GF F T
Sbjct: 121 FAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIANIMKTLAYQGFIFKQT 173
>gi|417399372|gb|JAA46706.1| Putative 3'-5' exoribonuclease 1 [Desmodus rotundus]
Length = 349
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 10/199 (5%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP V+++ + EI FQ YVRP L+
Sbjct: 127 YDYICIIDFEATCE-EGNPPEFLH--EIIEFPVVLLNTHTLEIEDTFQQYVRPEMNAQLS 183
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
DFC LTGI Q QVD T + L W+ L + ++T WD L +C
Sbjct: 184 DFCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLHIQC 243
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ K++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 244 QLSKLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 303
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + + + +
Sbjct: 304 RIAVRMLQDGCELRVNEKM 322
>gi|395850252|ref|XP_003797709.1| PREDICTED: 3'-5' exoribonuclease 1 [Otolemur garnettii]
Length = 349
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLHIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ PA+ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 305 IAVRMLQDGCELRVNEKM 322
>gi|444302267|pdb|4HXH|B Chain B, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
gi|444302270|pdb|4HXH|E Chain E, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
Length = 303
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 73 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 130
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 131 FCISLTGITQDQVDRADTFPQVLKKVIDWXKLKELG-TKYKYSLLTDGSWDXSKFLNIQC 189
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELA--GLIWQGRVHCGLDDAINIA 173
++ +++ P + +WIN+R + + R K + L G + GR HCGLDD+ NIA
Sbjct: 190 QLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSKNIA 249
Query: 174 RLLSVIMRRGFKFSITK 190
R+ ++ G + I +
Sbjct: 250 RIAVRXLQDGCELRINE 266
>gi|281345321|gb|EFB20905.1| hypothetical protein PANDA_019321 [Ailuropoda melanoleuca]
Length = 311
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 89 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 146
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 147 FCINLTGITQDQVDRADTFPQVLKQVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCR 206
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 207 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 266
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 267 IAVRMLQDGCELRINEKM 284
>gi|45476845|sp|Q7TMF2.2|ERI1_MOUSE RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-exonuclease 1
gi|28204890|gb|AAH46412.1| Exoribonuclease 1 [Mus musculus]
gi|74179153|dbj|BAE42771.1| unnamed protein product [Mus musculus]
gi|148703505|gb|EDL35452.1| three prime histone mRNA exonuclease 1 [Mus musculus]
Length = 345
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP V+++ + EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ PA+ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 RLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 300 RIAVRMLQDGCELRINEKI 318
>gi|432117301|gb|ELK37688.1| 3'-5' exoribonuclease 1 [Myotis davidii]
Length = 349
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTGTLEIEDTFQQYVRPEVNTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +CR
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRGQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|194226477|ref|XP_001915858.1| PREDICTED: 3'-5' exoribonuclease 1 [Equus caballus]
Length = 349
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L W+ L +S++T WD L +CR
Sbjct: 185 FCINLTGITQDLVDGADTFPQVLRKVVDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCR 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|323455145|gb|EGB11014.1| hypothetical protein AURANDRAFT_6072, partial [Aureococcus
anophagefferens]
Length = 194
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVS---GVSGEIIA--CFQTYVRPT 50
+ Y VV+DFE TC + + EIIEFP+VVV G S ++ A FQ +VRPT
Sbjct: 1 YRYLVVVDFECTCVADTTYQKKTPFSHEIIEFPAVVVDLTLGESQDVFARPTFQRFVRPT 60
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVM 110
P L+DFC +LTGI Q VD L + L WL + L +++ WD +
Sbjct: 61 ERPRLSDFCTKLTGISQETVDAAEPLADVLAAFRAWLEEQNLAPGTYAMAADGPWDLRKF 120
Query: 111 LESECRIKKIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDA 169
L EC K + + W+++ + K + R NL+ + L GL ++GR H GLDDA
Sbjct: 121 LLGECARKHLAADPRWRTWVDVSLHLRKHYDVKRPGNLENKLALLGLAFEGRPHSGLDDA 180
Query: 170 INIARLLSVIMRRG 183
NIARL + R G
Sbjct: 181 RNIARLALRLRRDG 194
>gi|26379605|dbj|BAB29127.2| unnamed protein product [Mus musculus]
Length = 345
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP V+++ + EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNDQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ PA+ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 RLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 300 RIAIRMLQDGCELRINEKI 318
>gi|165905605|ref|NP_080343.4| 3'-5' exoribonuclease 1 [Mus musculus]
gi|26380424|dbj|BAB29333.2| unnamed protein product [Mus musculus]
gi|74228094|dbj|BAE38007.1| unnamed protein product [Mus musculus]
Length = 345
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP V+++ + EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHTLEIEDTFQQYVRPEVNDQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLSIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
R+ +++ PA+ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 RLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + +
Sbjct: 300 RIAIRMLQDGCELRINEKI 318
>gi|260801283|ref|XP_002595525.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
gi|229280772|gb|EEN51537.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
Length = 222
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
Query: 2 EYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+YY V+DFEATC K R EIIEF +V+V G + ++ F + RP P+L FCK
Sbjct: 8 KYYCVVDFEATCIKPRRADFRTEIIEFGAVIVDGSNFQMADEFHEFCRPVENPVLHQFCK 67
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGIQQ VD+ KWL GL ++NF++VT +DC ++ S+C + ++
Sbjct: 68 ELTGIQQDTVDSADPFPVVFDRFQKWLSNRGLIDSNFALVTDGIFDCNQIMRSQCEVSQM 127
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRC-------NLKEAVELAGLIWQGRVHCGLDDAINIA 173
P++ ++ N+++ + + G +R + + + G+ +G++H + DA NI
Sbjct: 128 SFPSFARRFSNIKIHYMQFMG-IRLRRGQPTPRIPDMLRALGISQEGQLHSAISDARNIC 186
Query: 174 RLLSVIMRR 182
R++ + RR
Sbjct: 187 RIMEALSRR 195
>gi|62859267|ref|NP_001016146.1| exoribonuclease 1 [Xenopus (Silurana) tropicalis]
gi|89268181|emb|CAJ81479.1| exonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y VIDFEATC++ + + EIIEFP V+++ + EI FQ YVRP P L++FC
Sbjct: 123 YDYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFC 182
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q VD + L W+ + L ++++T WD L +CR+
Sbjct: 183 VNLTGITQDIVDKSDIFPDVLRSVVDWMREKELGTKYKYAILTDGSWDMSKFLNMQCRVS 242
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLK--EAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ P + +WIN+ + + R K +E G+ + GR+H G+DD+ NIAR+
Sbjct: 243 RLKYPRFAKKWINICKSYGNFYKVPRTQTKLTTMLEKLGMTYDGRLHSGVDDSKNIARIA 302
Query: 177 SVIMRRGFKFSITKSL 192
+ +++ G + + + +
Sbjct: 303 AHMLQDGCELRVNERM 318
>gi|55670498|pdb|1W0H|A Chain A, Crystallographic Structure Of The Nuclease Domain Of
3'hexo, A Deddh Family Member, Bound To Ramp
Length = 204
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 9 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 66
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC LTGI Q QVD T + L W L ++G +S++T WD L +C
Sbjct: 67 FCISLTGITQDQVDRADTFPQVLKKVIDWXKLKELG-TKYKYSLLTDGSWDXSKFLNIQC 125
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELA--GLIWQGRVHCGLDDAINIA 173
++ +++ P + +WIN+R + + R K + L G + GR HCGLDD+ NIA
Sbjct: 126 QLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSKNIA 185
Query: 174 RLLSVIMRRGFKFSITK 190
R+ ++ G + I +
Sbjct: 186 RIAVRXLQDGCELRINE 202
>gi|449476440|ref|XP_002192871.2| PREDICTED: ERI1 exoribonuclease 2 [Taeniopygia guttata]
Length = 451
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 16/184 (8%)
Query: 25 IEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHD 84
+EFP+V+++ +G I + F YV+P P+L++FC ELTGI Q+QVD G+ L L
Sbjct: 30 VEFPAVLLNTSTGAIESEFHMYVQPQEHPILSEFCTELTGITQNQVDQGVPLNICLSQFL 89
Query: 85 KWLLQMGLNNT-NFSV---------------VTWSDWDCQVMLESECRIKKIQKPAYFNQ 128
KW+ ++ FS VTW+DWD V L EC+ K+++KP N
Sbjct: 90 KWVQKLQKEKKITFSTDSQSNSTSEAKACAFVTWTDWDLGVCLHYECKRKQLRKPDILNS 149
Query: 129 WINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSI 188
WI+L+ + + L A++ G+ ++GR H GLDD+ N ARL ++ G +
Sbjct: 150 WIDLKATYRAFYNRKPKGLNGALQDLGIAFEGREHSGLDDSRNTARLAWRLICDGCVLKV 209
Query: 189 TKSL 192
TKSL
Sbjct: 210 TKSL 213
>gi|340369543|ref|XP_003383307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Amphimedon queenslandica]
Length = 301
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 1 FEYYVVIDFEATCDK-ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +V+DFEATC+ + + EIIEFP ++ + +I+ F +Y RP L+ FC
Sbjct: 97 LKFLLVLDFEATCESVNSSDYIHEIIEFPVQLLDISTLKIVDTFHSYCRPCLNEKLSSFC 156
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
+LTGI+Q VD T E +W+ + L NFS+VT WD + L +C +
Sbjct: 157 TKLTGIEQSIVDKAPTFAEVFDDFTEWMEERELGTKHNFSLVTDCPWDIRECLFPQCALS 216
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
K+ P Y ++WI+ R FS + NL + G+ ++GR H GLDD+ NIAR++S
Sbjct: 217 KVSFPHYASKWIDARKLFSSFYQISSGNLANMLTQLGMSFEGREHSGLDDSKNIARIVSQ 276
Query: 179 IMRRG 183
++ G
Sbjct: 277 LISDG 281
>gi|209154444|gb|ACI33454.1| Histone mRNA 3-exonuclease 1 [Salmo salar]
Length = 346
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 12/200 (6%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y V+DFEATC+++ EIIEFP V+++ + EI FQ YVRP L++FC
Sbjct: 124 YDYICVVDFEATCEQDNPADFTHEIIEFPMVLLNTHTLEIEDTFQEYVRPEVNTQLSEFC 183
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
+LTGI Q VD+ T + L WL + L ++++T WD + ++CR+
Sbjct: 184 VKLTGITQKMVDDADTFPDVLEQVVLWLQEKELGTKYKYTLLTDGSWDMSKFMNTQCRLN 243
Query: 119 KIQKPAYFNQWINLRVPFSKVFGD------VRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
++ P + +WIN++ K++G+ + L +E GL ++GR H GLDD+ NI
Sbjct: 244 SLRYPQFAKKWINIK----KLYGNFYKVPRTQTKLSSMLEKLGLKYEGRPHSGLDDSRNI 299
Query: 173 ARLLSVIMRRGFKFSITKSL 192
A + +++ G + I + +
Sbjct: 300 AHIAMRMLQDGCQLRINERM 319
>gi|226372150|gb|ACO51700.1| Histone mRNA 3-exonuclease 1 [Rana catesbeiana]
Length = 348
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDK-ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +IDFEATC+ + EIIEFP V+++ + EI FQ YV+P +P L++FC
Sbjct: 126 YDYICIIDFEATCEGGNATDYVHEIIEFPIVLLNTRTLEIEDTFQRYVKPEIKPQLSEFC 185
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q +D T L W+ Q L ++++T WD L +CR+
Sbjct: 186 INLTGITQDIIDQADTFPVVLQSVVDWMRQKELGTKYKYAILTDGSWDMSKFLNMQCRVS 245
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIARLL 176
+I+ P + +WIN+R + + R K V E G+ + GR+H GLDD+ NIAR+
Sbjct: 246 RIKYPRFAKKWINIRKCYGNFYKVPRNQTKLTVMLEKLGMSYIGRLHSGLDDSKNIARIA 305
Query: 177 SVIMRRGFKFSITKSL 192
+++ G + + + +
Sbjct: 306 IHMLQDGCELRVNERM 321
>gi|431902290|gb|ELK08791.1| 3'-5' exoribonuclease 1 [Pteropus alecto]
Length = 349
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTNTLEIEDTFQQYVRPEVNTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +C+
Sbjct: 185 FCINLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMGYDGRPHSGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 305 IAVRMLQDGCELRINEKM 322
>gi|426204660|gb|AFY13248.1| ERI1 exoribonuclease 3-like protein, partial [Schistocerca
gregaria]
Length = 203
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YYV++DFEATC+ E N +P EIIEFP+V+V+ EI CFQ+Y RPT + L+ F
Sbjct: 52 YPYYVIVDFEATCE-EVNPPDYPHEIIEFPAVLVNSEKQEIEDCFQSYCRPTVKSTLSKF 110
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRI 117
C ELTGI Q QVD T E L + WL++ GL +++VT WD L +C++
Sbjct: 111 CTELTGITQEQVDKAETFPEVLSRFEAWLVEHGLGTKYKYAIVTDGPWDMGRFLYGQCQL 170
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLK 148
I P++ +W N+R F + R LK
Sbjct: 171 SGIPYPSFGKKWXNIRKTFXXFYKSKRYCLK 201
>gi|340058722|emb|CCC53082.1| putative phosphotransferase [Trypanosoma vivax Y486]
Length = 525
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F YVV+DFEATC++ R + EIIEFP V+V SG IA FQ YV+P +P L+DFC
Sbjct: 24 FHAYVVLDFEATCERGRRIPDPEIIEFPMVIVDSESGASIAEFQRYVQPVLKPRLSDFCT 83
Query: 61 ELTGIQQHQVDNGITLG----EALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
ELTGI Q V+ T EAL F +F VT DWD Q ML + R
Sbjct: 84 ELTGITQATVNAAQTFPFVFREALEFLHSHGFGDEAPYKSFLFVTCGDWDLQTMLPIQLR 143
Query: 117 IK-----KIQKPAYFNQWINLR------VPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
I +Q P F +W N++ +P + +R ++ + + + L +GR H G
Sbjct: 144 ISAEYGTSLQPPPSFYRWCNIKKLMQRLLPSACASRRIR-DIPDMLAVYNLELRGRHHSG 202
Query: 166 LDDAINIARLLSVIM 180
+DD NIA +L+ ++
Sbjct: 203 IDDCRNIATVLNRLV 217
>gi|291409160|ref|XP_002720873.1| PREDICTED: histone mRNA 3 end-specific exonuclease-like
[Oryctolagus cuniculus]
Length = 344
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 122 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEANTQLSD 179
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +C+
Sbjct: 180 FCINLTGITQDQVDKADTFPQVLRKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQ 239
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 240 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 299
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 300 IAVRMLQDGCELRINEKM 317
>gi|198414320|ref|XP_002130965.1| PREDICTED: similar to three prime histone mRNA exonuclease 1 [Ciona
intestinalis]
Length = 322
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+ Y VV+D+EATC+++ +PQ EIIEFP+V++ S E + F +Y +P P L+
Sbjct: 87 YPYLVVLDYEATCEQQ---NPQDYLHEIIEFPAVLIDTTSTERVDVFHSYCKPALNPQLS 143
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL-NNTNFSVVTWSDWDCQVMLESEC 115
+FC LTGIQQ VD+ + W+ + L + VT WD L +C
Sbjct: 144 EFCTSLTGIQQSDVDSAPDFTTVFNNFETWMKKHDLFAPRKCAFVTDGPWDFSRFLNIQC 203
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ +I+ P + +WINL+ + + + + + + GL ++GR HCG+DDA N++R+
Sbjct: 204 CLSEIKYPRWAKKWINLKKVYGNFYKLKKPKMMDMLSNIGLEFEGRHHCGMDDATNLSRI 263
Query: 176 LSVIMRRGFKFSITKSLT 193
+ ++ G F + L
Sbjct: 264 VQRMLDDGAIFQFNERLN 281
>gi|62079013|ref|NP_001014165.1| 3'-5' exoribonuclease 1 [Rattus norvegicus]
gi|78098993|sp|Q5FVR4.1|ERI1_RAT RecName: Full=3'-5' exoribonuclease 1; AltName: Full=Histone mRNA
3'-exonuclease 1
gi|58476450|gb|AAH89828.1| Three prime histone mRNA exonuclease 1 [Rattus norvegicus]
gi|149057952|gb|EDM09195.1| three prime histone mRNA exonuclease 1 [Rattus norvegicus]
Length = 345
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y +IDFEATC+ E N LH EIIEFP V+++ S EI FQ YVRP L+
Sbjct: 123 YDYICIIDFEATCE-EGNPAEFLH--EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLS 179
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
+FC LTGI Q QVD + L +W+ L + ++T WD L +C
Sbjct: 180 EFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQC 239
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIA 173
++ +++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIA
Sbjct: 240 QLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIA 299
Query: 174 RLLSVIMRRGFKFSITKSL 192
R+ +++ G + I + L
Sbjct: 300 RIAVRMLQDGCELRINEKL 318
>gi|351698003|gb|EHB00922.1| 3'-5' exoribonuclease 1 [Heterocephalus glaber]
Length = 348
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YV+P L+D
Sbjct: 126 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPEINTQLSD 183
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +C+
Sbjct: 184 FCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQ 243
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIAR
Sbjct: 244 LSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAR 303
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 304 IAVRMLQDGCELRINEKM 321
>gi|342185674|emb|CCC95159.1| putative phosphotransferase [Trypanosoma congolense IL3000]
Length = 582
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 17/216 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ YV++DFEATC++ + + E+IEFP +++ ++G IA FQ YVRP P L+DFC
Sbjct: 75 FDVYVILDFEATCERGKRICVPEVIEFPMILLDALTGRTIAEFQQYVRPVVNPRLSDFCT 134
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS----VVTWSDWDCQVMLESECR 116
EL GI+Q VD T +L Q G +T S +T+ DWD + ML + +
Sbjct: 135 ELVGIRQETVDKADTFPSVFSSAMNFLQQNGCGDTPSSKRHLFITFGDWDLKTMLPLQLQ 194
Query: 117 I-----KKIQKPAYFNQWINLRVPFSKVF------GDVRC--NLKEAVELAGLIWQGRVH 163
I P + +W N++ ++ +R ++ + + + L QGR H
Sbjct: 195 ACCDQGVSICVPPFLRRWCNIKRLMQQMLFQGVWQAGLRFIRDIPDMMNILSLEMQGRHH 254
Query: 164 CGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
G+DD NIA ++ +++ G+ F+ T + PN
Sbjct: 255 SGIDDCRNIAAAVAKLIQAGYVFAPTTDNSGLTPPN 290
>gi|116666689|pdb|1ZBH|A Chain A, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666690|pdb|1ZBH|B Chain B, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666691|pdb|1ZBH|C Chain C, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666692|pdb|1ZBH|D Chain D, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
Length = 299
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 77 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 134
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L D L+ +S++T WD L +C+
Sbjct: 135 FCISLTGITQDQVDRADTFPQVLKKVIDLMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQ 194
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + E G+ + GR +CGLDD+ NIAR
Sbjct: 195 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPNCGLDDSKNIAR 254
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 255 IAVRMLQDGCELRINEKM 272
>gi|116666695|pdb|1ZBU|A Chain A, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666696|pdb|1ZBU|B Chain B, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666697|pdb|1ZBU|C Chain C, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666698|pdb|1ZBU|D Chain D, Crystal Structure Of Full-Length 3'-Exonuclease
Length = 349
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 8/196 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L D L+ +S++T WD L +C+
Sbjct: 185 FCISLTGITQDQVDRADTFPQVLKKVIDLXKLKELGTKYKYSLLTDGSWDXSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELA--GLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WIN+R + + R K + L G + GR HCGLDD+ NIAR
Sbjct: 245 LSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIXLEKLGXDYDGRPHCGLDDSKNIAR 304
Query: 175 LLSVIMRRGFKFSITK 190
+ ++ G + I +
Sbjct: 305 IAVRXLQDGCELRINE 320
>gi|390370627|ref|XP_001187567.2| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHP----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F+Y VID EATC + ++P EIIEFP V+++ + +I F + +P P L+
Sbjct: 223 FDYLCVIDVEATC---QEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKPVINPQLS 279
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
FC +LT I Q VD L ++W+ Q GL + +F++ T D + L+ +C
Sbjct: 280 KFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGLGSKHSFAIATDCSLDMDLYLKLQC 339
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ +I P Y +W+N+ F+ ++ R L+ ++ GL + G+ H G+DDA NIAR+
Sbjct: 340 LVSEISYPQYAKEWVNISKVFANLYKTKRLPLRAMLDSTGLAFIGQPHRGIDDARNIARV 399
Query: 176 LSVIMRRGFKFSITKSLTP 194
++ G + + LTP
Sbjct: 400 ALQLIEDGAEMKYNERLTP 418
>gi|407410790|gb|EKF33102.1| hypothetical protein MOQ_003039 [Trypanosoma cruzi marinkellei]
Length = 372
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 106/225 (47%), Gaps = 41/225 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRPT P LT FC
Sbjct: 92 FSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTSFCT 151
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------GLNN------------ 94
LTGI Q QVD L E L D+WL ++ GLN
Sbjct: 152 ALTGITQAQVDAAPRLPEVLRHFDRWLREVVYPLCRRWRKEHPEGLNKCLKASQKRRLVC 211
Query: 95 ------------TNFSVVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSKVF 140
+VT WD + + EC + + P F +W+N+R F++ F
Sbjct: 212 DETHNPGWVDCERMICMVTDGPWDMRKFM-YECSVVRDGHFFPPIFYRWVNVRHSFAEHF 270
Query: 141 GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
L + ++ GL + G H G+DD+ NIAR++ +++RG++
Sbjct: 271 RMRPRKLTDMLKKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYR 315
>gi|390347745|ref|XP_796324.3| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHP----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
F+Y VID EATC + ++P EIIEFP V+++ + +I F + +P P L+
Sbjct: 223 FDYLCVIDVEATC---QEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKPVINPQLS 279
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESEC 115
FC +LT I Q VD L ++W+ Q GL + +F++ T D + L+ +C
Sbjct: 280 KFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGLGSKHSFAIATDCSLDMDLYLKLQC 339
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ +I P Y +W+N+ F+ ++ R L+ ++ GL + G+ H G+DDA NIAR+
Sbjct: 340 LVSEIPYPQYAKEWVNISKVFANLYKTKRLPLRAMLDSTGLAFIGQPHRGIDDARNIARV 399
Query: 176 LSVIMRRGFKFSITKSLTP 194
++ G + + LTP
Sbjct: 400 ALQLIEDGAEMKYNERLTP 418
>gi|307150076|ref|YP_003885460.1| exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
gi|306980304|gb|ADN12185.1| Exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
Length = 199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 1 FEYYVVIDFEATC-------DKERNL---HPQEIIEFPSVVVSGVSGEIIACFQTYVRPT 50
++YY+V+D EATC + ER H EIIE +V+V I+A FQT+++P
Sbjct: 7 YDYYLVLDLEATCCELLRSTEGERGTIKRHEMEIIEIGAVMVEKQDLTIVAEFQTFIKPV 66
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVM 110
P+LT+FCK LT I Q QVD + EA KWL N +N +W D+D
Sbjct: 67 RYPILTNFCKSLTSITQTQVDQAPSYPEAAILLKKWL----SNYSNAVFGSWGDYDRHQF 122
Query: 111 LESECRIKKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDA 169
L+ + + ++ P + +NL+ FS+ G R +KEA+ELAGL G H G+DDA
Sbjct: 123 LQ-DSKFHQVPFPIAYPH-VNLKQLFSERQGLPKRYGMKEALELAGLTLSGTHHRGIDDA 180
Query: 170 INIARLLSVIMRR 182
NIA+LL I+ R
Sbjct: 181 RNIAKLLPYILGR 193
>gi|354471547|ref|XP_003498003.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cricetulus griseus]
Length = 319
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +IDFEATC++ EIIEFP V+++ + EI FQ YVRP L+DFC
Sbjct: 97 YDYICIIDFEATCEEGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDFC 156
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q QVD + L +W+ L + ++T WD L +C++
Sbjct: 157 VSLTGITQDQVDRADAFPQVLRKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLS 216
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIARLL 176
+++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR+
Sbjct: 217 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 276
Query: 177 SVIMRRGFKFSITKSL 192
+++ G + I + +
Sbjct: 277 VRMLQDGCELRINEKI 292
>gi|344240333|gb|EGV96436.1| 3'-5' exoribonuclease 1 [Cricetulus griseus]
Length = 279
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++Y +IDFEATC++ EIIEFP V+++ + EI FQ YVRP L+DFC
Sbjct: 57 YDYICIIDFEATCEEGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDFC 116
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
LTGI Q QVD + L +W+ L + ++T WD L +C++
Sbjct: 117 VSLTGITQDQVDRADAFPQVLRKVIEWMKSKELGTKYKYCILTDGSWDMSKFLNIQCQLS 176
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIARLL 176
+++ P + +WIN+R + + R K + E G+ + GR H GLDD+ NIAR+
Sbjct: 177 RLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIA 236
Query: 177 SVIMRRGFKFSITKSL 192
+++ G + I + +
Sbjct: 237 VRMLQDGCELRINEKI 252
>gi|340052994|emb|CCC47280.1| putative exonuclease [Trypanosoma vivax Y486]
Length = 381
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 36/222 (16%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD+ R+ P EIIEFP VVV ++A F +YVRP P LT FC
Sbjct: 111 FSHILVCDFEATCDESRHHFPHEIIEFPVVVVDTARLCVVAEFHSYVRPVHHPKLTPFCI 170
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------------GLNNTNFSVV 100
ELTGI Q QVD TL L + WL ++ G+ +
Sbjct: 171 ELTGITQAQVDEAPTLPVVLGRFNDWLRRVVYPLCREWKVNSRELRNDLPGVGRFVYDNE 230
Query: 101 TWSDW-DCQVML----ESECRIKKIQK-----------PAYFNQWINLRVPFSKVFGDVR 144
+W DC+ M+ + + ++K P F +WI++R F + F
Sbjct: 231 HNPEWVDCERMVCFATDGQSDMRKFMHACSVVRDGHVFPPLFYRWIDVRACFCQHFRYRP 290
Query: 145 CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKF 186
+ + ++ G ++GR H G+DD+ NIAR+L +MRRG+K
Sbjct: 291 RKITDMLKRLGRSFRGRQHSGIDDSRNIARILMELMRRGYKI 332
>gi|242018695|ref|XP_002429809.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212514827|gb|EEB17071.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 237
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y +++DFEATCDK++ QEIIEFP + ++ + + F YVRP P LT+FC
Sbjct: 43 YDYLLILDFEATCDKKK--FEQEIIEFPCLKINMNTLREESRFHKYVRPVINPKLTNFCT 100
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGI Q VD+ T E ++W GL + N VT DWD M+ +C I KI
Sbjct: 101 ELTGIIQEMVDDEPTFNEVYLLFEQWRKSEGLTDDNSIYVTSGDWDLGYMMPRQCAISKI 160
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
Q P++ WI+++ + + +L E + + + GR H G+ I RL
Sbjct: 161 QVPSHMMTWIDIKKLYGINYNCYCGSLIEIFRVFNIEFDGRNHSGI-----IKRL----S 211
Query: 181 RRGFKFSITKSLTPQAN 197
+ KF+ T +LT N
Sbjct: 212 KLNIKFTPTSNLTLSKN 228
>gi|348553710|ref|XP_003462669.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cavia porcellus]
Length = 343
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 8/198 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 121 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 178
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L + ++T WD L +C+
Sbjct: 179 FCIRLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYCILTDGSWDMSKFLNIQCQ 238
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P++ +WIN+R + + R K + E G+ + GR H GLDD+ NIA+
Sbjct: 239 LCRLKYPSFAKKWINVRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIAK 298
Query: 175 LLSVIMRRGFKFSITKSL 192
+ +++ G + I + +
Sbjct: 299 IAVRMLQDGCELRINEKM 316
>gi|402224358|gb|EJU04421.1| exonuclease RNase T and DNA polymerase III [Dacryopinax sp. DJM-731
SS1]
Length = 212
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+Y++++DFEATC R ++ QE+IEFP +V S A F YV+P P LTDFC
Sbjct: 12 LKYFLILDFEATCASPRPVNFVQEVIEFPCIVYSMEQEYPTAMFHEYVKPLLSPHLTDFC 71
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM--GLNNTNFSVVTWSDWDCQVMLESECRI 117
LTGI Q VD+G ++WL ++ + +F VT +WD Q ML ++ R
Sbjct: 72 TRLTGISQATVDSGDKFSNVWRRFNEWLARLCQDTDPRSFIFVTCGNWDLQTMLPAQLRQ 131
Query: 118 KKIQKP--------AYFNQWINLRVPFSKVF-GDVRCNLKEAVELAGLIWQGRVHCGLDD 168
I+ P F +++N++ F++ + D L E + + G+ +GR H G+DD
Sbjct: 132 CGIEFPRRETGHTGVDFTRYVNIKDAFAEFYDSDPPSGLLEMLHVLGMQLEGRFHSGIDD 191
Query: 169 AINIARLLSVIMRRGFK 185
N++R++ + R G+K
Sbjct: 192 CRNVSRIIEQMRRDGWK 208
>gi|71417701|ref|XP_810631.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875192|gb|EAN88780.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 379
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRPT P LT FC
Sbjct: 92 FSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTSFCT 151
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------GLNN------------ 94
LTGI Q QVD L E L D WL ++ GLN
Sbjct: 152 ALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVY 211
Query: 95 ------------TNFSVVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSKVF 140
+VT WD + + EC + + P F +W+N+R F++ F
Sbjct: 212 DETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFAEHF 270
Query: 141 GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
L + + GL + G H G+DD+ NIAR++ +++RG++
Sbjct: 271 RMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYR 315
>gi|407410781|gb|EKF33094.1| hypothetical protein MOQ_003041 [Trypanosoma cruzi marinkellei]
Length = 379
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ +P EIIE P V++ G + F++YV+P P+L++F
Sbjct: 67 FDYIIVVDVEATCESNNENYPHEIIELPGVLIDVRRGIVDKRHSFRSYVKPWRNPVLSEF 126
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK+LTGI Q VDN L E + ++W + + WD + + ++
Sbjct: 127 CKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAFAADGPWDFKNFIHEHSILR 186
Query: 119 K-IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++++R F+ F L + L ++GR HCG DDA+NIARL
Sbjct: 187 DHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLRFEGRPHCGFDDAVNIARLA 246
Query: 177 SVIMRRG--FKFSITKSLTPQANPNCLTW 203
+MR G F F I + + + + T+
Sbjct: 247 VAMMREGCIFDFLIVIPMDDEYHYHLDTY 275
>gi|307104722|gb|EFN52974.1| hypothetical protein CHLNCDRAFT_26251 [Chlorella variabilis]
Length = 194
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 23 EIIEFPSVVVSGVSGEIIAC-FQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY 81
EIIE VVV ++ FQ YVRP P L+DFC ELTGI Q VD G+ L AL
Sbjct: 1 EIIELSCVVVDTARTTVLPVHFQRYVRPDQHPCLSDFCTELTGITQAMVDGGVPLHTALQ 60
Query: 82 FHDKWLLQMGL----------NNTNFSVV-TWSDWDCQVMLESECRIKKIQKPAYFNQWI 130
D WL Q GL + FS TW DWD +V ++ EC+ ++I++P + +WI
Sbjct: 61 DLDAWLRQQGLIGQVGGRCCSSRRCFSCCSTWRDWDLKVQMQMECKWRRIEQPRWQKRWI 120
Query: 131 NLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
++ + K G + NL+ + E A L W GR H +DDA N AR
Sbjct: 121 DIGAVWFKHSGK-KGNLRASCEAAELGWDGRAHSAIDDARNTAR 163
>gi|268554023|ref|XP_002634999.1| C. briggsae CBR-ERI-1 protein [Caenorhabditis briggsae]
Length = 578
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 7/197 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + IDFE TC + +P EIIE P+V++ +II+ F++YVRP P L+DFC
Sbjct: 139 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRSYVRPVKNPKLSDFCI 198
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
+ T I Q VD EAL +W+ + GL NT F+ VT D ++ +C +
Sbjct: 199 QFTKIAQETVDEAPYFREALEKLMQWMRKFGLGEKNTRFAFVTDGPHDMWKFMQFQCILS 258
Query: 119 KIQKPAYFNQWINLRVPFSKVF-----GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I+ P F +IN++ F + F G+ + ++ +E L + G H GLDDA NIA
Sbjct: 259 NIRMPHMFRNFINIKKTFKEKFNGLMKGNGKSGIENMLERLDLTFIGNKHSGLDDARNIA 318
Query: 174 RLLSVIMRRGFKFSITK 190
++ +M+ + I +
Sbjct: 319 QIAIQMMKLKIELRINQ 335
>gi|239793055|dbj|BAH72791.1| ACYPI010006 [Acyrthosiphon pisum]
Length = 340
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F Y+VVID EATC + + EIIEFP+V+V +II FQ +V+P+ P L++FC
Sbjct: 92 FPYFVVIDIEATCTENNPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPSINPKLSEFC 151
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECRIK 118
+LTGI Q Q+DN + L KWL + L FS+VT L +C +
Sbjct: 152 IKLTGITQDQIDNADSFEVCLTRFTKWLEEHELGIKHKFSIVTDGPLIWLRFLYGQCLMS 211
Query: 119 KIQKPAYFNQWINLRVPF------SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+I P + +WIN+R F +V V CNL + + ++G H GLDD+ NI
Sbjct: 212 EIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEFEGNPHSGLDDSFNI 271
Query: 173 ARLLSVIMRRG 183
+R+ ++ G
Sbjct: 272 SRICIRLLEDG 282
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 8/207 (3%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y VVIDFEATCD+ QEIIEFP VV+ V+ ++I Q YVRP + LT
Sbjct: 9 YDYLVVIDFEATCDEGEQPKVTRENQEIIEFPWVVIDLVNQQVIDKRQIYVRPEWTSQLT 68
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESEC 115
FC +LTGI ++ L EA+ D+++ F ++T DWD ++ L E
Sbjct: 69 PFCVKLTGITDDKLREAPLLHEAMAQFDRYVDDCFARRGKTFCILTDGDWDLKMCLLQET 128
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
R K I + ++ + +++ F KVF + +L + L+ +GR H GL D +NI
Sbjct: 129 RKKDIARAPHYMTYFDVKEEFLKVFPQPSHYKPSLMTMLRHLNLVMEGRHHSGLYDCVNI 188
Query: 173 ARLLSVIMRRGFKFSITKSLTPQANPN 199
+ ++ ++R G F + + P +P+
Sbjct: 189 SNIVLELIRHGHYFGQPQVIPPDYDPS 215
>gi|71407241|ref|XP_806103.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70869745|gb|EAN84252.1| exonuclease, putative [Trypanosoma cruzi]
Length = 289
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRPT P LT FC
Sbjct: 2 FSHLLVCDFEATCDSASVAYPLEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTSFCT 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------GLNN------------ 94
LTGI Q QVD L E L D WL ++ GLN
Sbjct: 62 ALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVY 121
Query: 95 ------------TNFSVVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSKVF 140
+VT WD + + EC + + P F +W+N+R F++ F
Sbjct: 122 DETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFAEHF 180
Query: 141 GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
L + + GL + G H G+DD+ NIAR++ +++RG++
Sbjct: 181 RMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYR 225
>gi|196013998|ref|XP_002116859.1| hypothetical protein TRIADDRAFT_4552 [Trichoplax adhaerens]
gi|190580577|gb|EDV20659.1| hypothetical protein TRIADDRAFT_4552, partial [Trichoplax
adhaerens]
Length = 189
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 2 EYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y+VIDFEAT K R+ H EIIEFP++++ + E+ + F +YVRPT L+ FCK
Sbjct: 5 DFYLVIDFEATTKSKYRDYHLPEIIEFPALLIDASTLEVFSEFHSYVRPTINRTLSKFCK 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI Q VD + WL N NFS+VT S + ++CR +K+
Sbjct: 65 RLTGISQAMVDKASDFATVHHLFLNWLCNATSNRNNFSMVTSSCKGTIELFLTQCRREKV 124
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + WI+L + F K +G R + + + + ++GR G A N+A +L +
Sbjct: 125 AIPLWIEHWIDLPIIFRKCYGYHRFPTISDMLHKFQIAYEGRFLHGFQRAENLAAILCGM 184
Query: 180 MRRG 183
++ G
Sbjct: 185 LQDG 188
>gi|360043282|emb|CCD78695.1| putative 3-5 exonuclease eri1 [Schistosoma mansoni]
Length = 562
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
Query: 1 FEYYVVIDFEATCDKERNL-----HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y ++ID EATC+ + + +P EIIEFP ++ S + ++ F Y +P P L
Sbjct: 291 YDYLLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPRLHPDL 350
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM-GLNNTNFSVVTWSDWDCQVMLESE 114
++FC +LT IQQ QVDN L ++WL + L N ++V D + +
Sbjct: 351 SEFCTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLANKRCAIVCDCSADMSKFMRIQ 410
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
CR+ I P++ N WINL F + R L + GL + G+ H GLDDAIN
Sbjct: 411 CRLSNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGLSFVGQRHRGLDDAIN 470
Query: 172 IARLLSVIMRRGFKFSITKSL 192
I R++ V++ G + + +
Sbjct: 471 ILRIVRVLLSDGCSLRVNERI 491
>gi|340052992|emb|CCC47278.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 746
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHP-----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
F+Y +V+DFEATC++ HP EIIEFP VVV +A F YVRP +P L
Sbjct: 529 FDYLLVVDFEATCEE----HPPPSYLHEIIEFPVVVVDTKLKRAVAEFHRYVRPKVQPKL 584
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
++FC LTGI+Q +DN L E + ++W Q + T D + M
Sbjct: 585 SEFCLRLTGIRQEDIDNAAPLEEVIRQFERWYAQTIPPGCRAVLATDGPTDMREFMYVHS 644
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P+ F QWI+++ F+ F + +K +E+ ++GR+H G+DDA NIA
Sbjct: 645 VSRQGIRFPSMFYQWIDVKQAFANFFQCQQGKIKAMLEVLHCPFEGRLHSGMDDAKNIAN 704
Query: 175 LLSVIMRRGFKF 186
++ +++ G F
Sbjct: 705 IVIRMLQVGCSF 716
>gi|256076258|ref|XP_002574430.1| 3'-5' exonuclease [Schistosoma mansoni]
Length = 576
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
Query: 1 FEYYVVIDFEATCDKERNL-----HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y ++ID EATC+ + + +P EIIEFP ++ S + ++ F Y +P P L
Sbjct: 291 YDYLLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPRLHPDL 350
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM-GLNNTNFSVVTWSDWDCQVMLESE 114
++FC +LT IQQ QVDN L ++WL + L N ++V D + +
Sbjct: 351 SEFCTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLANKRCAIVCDCSADMSKFMRIQ 410
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
CR+ I P++ N WINL F + R L + GL + G+ H GLDDAIN
Sbjct: 411 CRLSNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGLSFVGQRHRGLDDAIN 470
Query: 172 IARLLSVIMRRGFKFSITKSL 192
I R++ V++ G + + +
Sbjct: 471 ILRIVRVLLSDGCSLRVNERI 491
>gi|434398749|ref|YP_007132753.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
gi|428269846|gb|AFZ35787.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
Length = 189
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 109/190 (57%), Gaps = 19/190 (10%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y++++D EATC + + H EIIE +V++ II+ FQT+++P P+LT+F
Sbjct: 7 YQYFLIVDLEATCCDRKTIPRHQMEIIEIGAVIIEAKELNIISEFQTFIKPIRHPILTNF 66
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C++LT I Q Q+D+ + +A+ +WL +NF +W D+D + E +C+
Sbjct: 67 CQQLTSITQKQIDSALNYSQAIAVFKEWLYAY----SNFIFGSWGDYD-RKQFEQDCQFH 121
Query: 119 KIQKPAYFNQWINLRVPFS------KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
++ P ++ INL+ FS +G +K+A++LA + +G H G+DDA NI
Sbjct: 122 QVAYPIA-SKHINLKKLFSTNQELKSTYG-----MKQALQLAKIELEGTHHRGIDDARNI 175
Query: 173 ARLLSVIMRR 182
A+L+ I+ R
Sbjct: 176 AKLMPYILAR 185
>gi|261327261|emb|CBH10237.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 762
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 1 FEYYVVIDFEATCDK---ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC++ LH EIIEFP VVV +I F YV+P +P L++
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLH--EIIEFPVVVVDAKLQRVITEFHRYVKPKVKPQLSE 609
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESECR 116
FC++LTGI+Q +D+ L + + ++W Q + +VT D + M
Sbjct: 610 FCRQLTGIRQEDIDSAAPLEDVIKQFERWYAQTIPPGSRTVLVTDGPADLREFMYVHSVT 669
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+ P+ F QWI+++ F+ F + +K +E+ ++GR+H G+DDA NIA+++
Sbjct: 670 RQGIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVLQCPFEGRLHSGIDDARNIAKIV 729
Query: 177 SVIMRRGFKF 186
++ G F
Sbjct: 730 IRMLEVGCSF 739
>gi|72387359|ref|XP_844104.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360612|gb|AAX81023.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800636|gb|AAZ10545.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 762
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 1 FEYYVVIDFEATCDK---ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC++ LH EIIEFP VVV +I F YV+P +P L++
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLH--EIIEFPVVVVDAKLQRVITEFHRYVKPKVKPQLSE 609
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESECR 116
FC++LTGI+Q +D+ L + + ++W Q + +VT D + M
Sbjct: 610 FCRQLTGIRQEDIDSAAPLEDVIKQFERWYAQTIPPGSRTVLVTDGPADLREFMYVHSVT 669
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+ P+ F QWI+++ F+ F + +K +E+ ++GR+H G+DDA NIA+++
Sbjct: 670 RQGIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVLQCPFEGRLHSGIDDARNIAKIV 729
Query: 177 SVIMRRGFKF 186
++ G F
Sbjct: 730 IRMLEVGCSF 739
>gi|341884091|gb|EGT40026.1| hypothetical protein CAEBREN_30328 [Caenorhabditis brenneri]
Length = 442
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + DFE TC + +P EIIE P+V++ II+ F+TYVRP P+L+DFC
Sbjct: 153 FDYLIATDFECTCVEVIYDYPHEIIELPAVLIDVRDKRIISEFRTYVRPVRNPVLSDFCV 212
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
+ T I Q VD EAL +W+ + GL T F+ VT D ++ +C +
Sbjct: 213 DFTKIAQETVDEAPYFREALEKLYQWMRKFGLGEKKTRFAFVTDGPHDMWKFMQFQCLLS 272
Query: 119 KIQKPAYFNQWINLRVPFSKVF-GDVRCNLKEAVELA----GLIWQGRVHCGLDDAINIA 173
I+ P F +IN++ + + F G V+ N K +E GL + G H GLDDA NIA
Sbjct: 273 NIRMPHMFRNFINIKKTYKENFNGLVKGNGKSGIENMLDGLGLSFIGNKHSGLDDAKNIA 332
Query: 174 RLLSVIM 180
+++ +M
Sbjct: 333 QIVIHLM 339
>gi|71417705|ref|XP_810633.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875194|gb|EAN88782.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSG--EIIACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ + + EIIEFP V++ G + F++YV+P P+L++F
Sbjct: 82 FDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDTRRSFRSYVKPWRNPVLSEF 141
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ-VMLESECRI 117
CK+LTGI Q VDN L E + ++W + + WD + + E
Sbjct: 142 CKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAFAADGPWDFKNFIYEHSILR 201
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++++R F+ F L + L ++GR HCG DDA+NIARL
Sbjct: 202 DHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLRFEGRPHCGFDDAVNIARLA 261
Query: 177 SVIMRRG--FKFSIT 189
+MR G F F I
Sbjct: 262 VAMMRAGCIFDFLIV 276
>gi|196009752|ref|XP_002114741.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
gi|190582803|gb|EDV22875.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
Length = 276
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 2 EYYVVIDFEATCDK-ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+YY VIDFEATC++ + EIIEFP+++V+ + + + F Y RP P L+ FC
Sbjct: 79 DYYCVIDFEATCEEVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRPVMNPKLSSFCT 138
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGI Q +D+ KWL + L + F VVT +D L +C++ KI
Sbjct: 139 KLTGIDQKTIDSADAFKVVFQNFQKWLEDV-LGESTFVVVTDGPFDITRFLTIQCKVDKI 197
Query: 121 QKPAYFNQWINLRVPFS---KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P + + W NL+ F K+ G L++ + + GR+H G+DDA NIA++L
Sbjct: 198 PMPYWASNWTNLKRTFKAFYKLSGQRFPTLQDMLGALKIPHDGRLHSGIDDAKNIAKILC 257
Query: 178 VIMRRG 183
++R G
Sbjct: 258 QLIRDG 263
>gi|71650409|ref|XP_813903.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878830|gb|EAN92052.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSG--EIIACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ + + EIIEFP V++ G + F++YV+P P+L++F
Sbjct: 82 FDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDTRRSFRSYVKPWRNPVLSEF 141
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ-VMLESECRI 117
CK+LTGI Q VDN L E + ++W + + WD + + E
Sbjct: 142 CKKLTGISQEDVDNAPGLPEVVKAFERWYRETIPIGAKVAFAADGPWDFKNFIYEHSILR 201
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++++R F+ F L + L ++GR HCG DDA+NIARL
Sbjct: 202 DHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLRFEGRPHCGFDDAVNIARLA 261
Query: 177 SVIMRRG--FKFSIT 189
+MR G F F I
Sbjct: 262 VAMMRAGCIFDFLIV 276
>gi|392571225|gb|EIW64397.1| exonuclease RNase T and DNA polymerase III [Trametes versicolor
FP-101664 SS1]
Length = 215
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 17/201 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
Y +V+DFEATCD + P+ E+IEFP+++ ++ A F YVRPT P LT
Sbjct: 4 LRYLLVLDFEATCDNTNRIVPRQEMEVIEFPTILYDIEQDKVEAVFHEYVRPTLHPTLTP 63
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVV--TWSDWDCQVMLESEC 115
FC +LTGIQQ VD+ + + ++L G+ ++ S + T DWD + ML +
Sbjct: 64 FCTDLTGIQQATVDSAAPFPDVWERYQEFLRTHGVVDSPSSAIYLTCGDWDLKTMLPMQL 123
Query: 116 RIKKIQKP---------AYFNQWINLRVPFSKVFGDVRC--NLKEAVELAGLIWQGRVHC 164
R+ K+ + A +++WIN++ + + F D++ + + A + +GR H
Sbjct: 124 RLSKLLESSSTPSGTLVAPYDRWINIKNSYRR-FHDLKYPKGMASMLTHAKMELEGRHHS 182
Query: 165 GLDDAINIARLLSVIMRRGFK 185
G+DD NI RL+ + + G+K
Sbjct: 183 GIDDCKNILRLVQRMRQDGWK 203
>gi|407832341|gb|EKF98412.1| hypothetical protein TCSYLVIO_010686 [Trypanosoma cruzi]
Length = 379
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 103/225 (45%), Gaps = 41/225 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRPT LT FC
Sbjct: 92 FSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNSRLTSFCT 151
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------GLNN------------ 94
LTGI Q QVD L E L D WL ++ GLN
Sbjct: 152 ALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVY 211
Query: 95 ------------TNFSVVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSKVF 140
+VT WD + + EC + + P F +W+N+R F++ F
Sbjct: 212 DETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFAEHF 270
Query: 141 GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
L + + GL + G H G+DD+ NIAR++ +++RG++
Sbjct: 271 RMRPRKLNDMLRKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYR 315
>gi|342180403|emb|CCC89880.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 760
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHP---QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
F+Y +V+DFEATC E N P EIIEFP VVV +I F YVRP F+ L+D
Sbjct: 549 FDYILVVDFEATC--EENAPPSYLHEIIEFPVVVVDVKLQRVITEFHRYVRPKFKSQLSD 606
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESECR 116
FC+ LTGIQQ +D+ L + + ++W Q + + T D + M
Sbjct: 607 FCRALTGIQQDDIDSASLLEDVIKQFERWYAQTIPPGSRVVLATDGPADMREFMYVHSVT 666
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+ P F QWI+++ F+ F + +K +E+ ++GR+H G+DDA NIA+++
Sbjct: 667 RQGIRFPNLFYQWIDVKQIFAHFFQCQQGKIKAMLEVLHCPFEGRLHSGIDDARNIAKIV 726
Query: 177 SVIMRRGFKF 186
++ G F
Sbjct: 727 IRMLEVGCSF 736
>gi|389593759|ref|XP_003722128.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438626|emb|CBZ12385.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 880
Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
+EY +V+DFEATC++ HP EIIEFP VVV ++A F +VRP ++ L
Sbjct: 629 YEYLLVLDFEATCEE----HPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKREL 684
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
+ FCK+LTG++Q VD +L E + ++WL + VT D + M
Sbjct: 685 SSFCKKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFMYYHS 744
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P+ F Q+I+++ F+ F + +K +E+ L ++GR+H GLDDA NIA
Sbjct: 745 VSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVMHLPFEGRLHSGLDDARNIAS 804
Query: 175 LLSVIMRRGFKF 186
++ ++ G F
Sbjct: 805 IVIGLLHHGCSF 816
>gi|402589059|gb|EJW82991.1| hypothetical protein WUBG_06097 [Wuchereria bancrofti]
Length = 149
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC++ + P QEIIEFP + +SG + E + F YVRPT P+LT FC
Sbjct: 16 FDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRPTERPILTSFC 75
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN------FSVVTWSDWDCQVMLES 113
+LTGI Q V++ +L E L DKWLL + L NT+ F+ +T DWD V+L S
Sbjct: 76 TDLTGIVQETVESQASLPEVLDAFDKWLLDLNLINTDHSMKSLFTFITSGDWDLGVLLPS 135
Query: 114 ECRIKKIQKP 123
E + ++ P
Sbjct: 136 EANYRNLELP 145
>gi|71755417|ref|XP_828623.1| phosphotransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834009|gb|EAN79511.1| phosphotransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 540
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ Y+V+DFEATC++ + L E+IEFP V+V +G I+ FQ YVRP P L+ FC
Sbjct: 31 FDTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRPVVNPQLSQFCT 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN----NTNFSVVTWSDWDCQVMLESECR 116
ELTGI Q VD T + +L Q N + VT DWD + ML + +
Sbjct: 91 ELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGEREINKRYLPVTCGDWDLKTMLPIQVK 150
Query: 117 --IKK---IQKPAYFNQWINLRVPFSKVFG---------DVRCNLKEAVELAGLIWQGRV 162
I++ + P +W N++ +V +R +L + + + GL +GR
Sbjct: 151 ACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIR-DLPDMMSVLGLEMKGRH 209
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSIT 189
H G+DD NIA +L +++ G + T
Sbjct: 210 HSGIDDCRNIAAVLCELIKLGHVITPT 236
>gi|261334507|emb|CBH17501.1| phosphotransferase, putative [Trypanosoma brucei gambiense DAL972]
Length = 540
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ Y+V+DFEATC++ + L E+IEFP V+V +G I+ FQ YVRP P L++FC
Sbjct: 31 FDTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRPVVNPQLSEFCT 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN----NTNFSVVTWSDWDCQVMLESECR 116
ELTGI Q VD T + +L Q N + VT DWD + ML + +
Sbjct: 91 ELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGETEINKRYLPVTCGDWDLKTMLPIQVK 150
Query: 117 --IKK---IQKPAYFNQWINLRVPFSKV----FGDVRC----NLKEAVELAGLIWQGRVH 163
I++ + P +W N++ +V G +L + + + GL +GR H
Sbjct: 151 ACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIHDLPDMMSVLGLEMKGRHH 210
Query: 164 CGLDDAINIARLLSVIMRRGFKFSIT 189
G+DD NIA +L +++ G + T
Sbjct: 211 SGIDDCRNIAAVLCELIKLGHVITPT 236
>gi|25148196|ref|NP_741293.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
gi|351064942|emb|CCD73975.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
Length = 448
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + IDFE TC + +P EIIE P+V++ +II+ F+TYVRP P L++FC
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCM 207
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL--LQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+ T I Q VD EAL W+ +G N+ F+ VT D ++ +C +
Sbjct: 208 QFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLS 267
Query: 119 KIQKPAYFNQWINLRVPFSKVF-----GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I+ P F +IN++ F + F G+ + ++ +E L + G H GLDDA NIA
Sbjct: 268 NIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIA 327
Query: 174 RLLSVIMRRGFKFSITKSLTPQAN 197
+ +M+ + I + + + N
Sbjct: 328 AIAIQMMKLKIELRINQKCSYKEN 351
>gi|170573706|ref|XP_001892569.1| exonuclease family protein [Brugia malayi]
gi|158601787|gb|EDP38593.1| exonuclease family protein [Brugia malayi]
Length = 193
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++++DFEATC++ + P QEIIEFP + +SG + E + F YVRPT P+LT FC
Sbjct: 60 FDYFLILDFEATCEEGMKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRPTERPILTSFC 119
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN------FSVVTWSDWDCQVMLES 113
+LTGI Q V++ +L E L D+WLL + L NT+ F+ VT DWD V+L S
Sbjct: 120 TDLTGIVQETVESQESLPEVLNAFDEWLLDLNLINTDHSMKSLFTFVTSGDWDLGVLLPS 179
Query: 114 ECRIKKIQKP 123
E + ++ P
Sbjct: 180 EANYRNLELP 189
>gi|407832351|gb|EKF98421.1| hypothetical protein TCSYLVIO_010684 [Trypanosoma cruzi]
Length = 394
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC+ + + EIIEFP V++ G + F++YV+P P+L++F
Sbjct: 82 FDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRRGIVDKRRSFRSYVKPWRNPVLSEF 141
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ-VMLESECRI 117
CK+LTGI Q VDN L + + ++W + + WD + + E
Sbjct: 142 CKKLTGISQEDVDNAPGLPDVVKAFERWYRETIPIGAKVAFAADGPWDFKNFIYEHSILR 201
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++++R F+ F L + L ++GR HCG DDA+NIARL
Sbjct: 202 DHVSFPGIFYEYLDIRTTFAHHFNRGAPIKLDAMLRRMRLRFEGRPHCGFDDAVNIARLA 261
Query: 177 SVIMRRG--FKFSIT 189
+MR G F F I
Sbjct: 262 VAMMRAGCIFDFLIV 276
>gi|170590708|ref|XP_001900113.1| exonuclease family protein [Brugia malayi]
gi|158592263|gb|EDP30863.1| exonuclease family protein [Brugia malayi]
Length = 399
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 6 VIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGI 65
VIDFE TC+ + + EIIEFP+V+V EI+ F +YVRP P L++FC TGI
Sbjct: 148 VIDFECTCEADLYDYNHEIIEFPAVLVDVRKKEIVDVFHSYVRPLANPQLSEFCSAFTGI 207
Query: 66 QQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK- 122
Q +D + + L W L ++G N+ ++ VT WD + +C K+
Sbjct: 208 TQEMIDKALPFIDVLDSFRTWMQLHRLGQNDMRYAFVTDGPWDIAKFFQMQCIQSKLNTV 267
Query: 123 PAYFNQWINLRVPFS----KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
P F +IN+R F+ K + + NL + + ++GR H GLDD+ NIAR++
Sbjct: 268 PHDFRFYINIRRSFANKYCKKYSMQKINLGGMLTFLNMKFEGREHSGLDDSKNIARIVIK 327
Query: 179 IMRRGFKFSITKSLT 193
++ + + + L
Sbjct: 328 MLEDRSELRVNEKLV 342
>gi|119920012|ref|XP_001253741.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|297492734|ref|XP_002699843.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|296471031|tpg|DAA13146.1| TPA: three prime histone mRNA exonuclease 1-like [Bos taurus]
Length = 370
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEF V+++ + EI FQ YVRP L+D
Sbjct: 127 YDYICIIDFEATC--EEGNPPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSD 184
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q QVD T + L W+ L +S++T WD L +C+
Sbjct: 185 FCINLTGITQDQVDKADTFPQVLKKVIDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCQ 244
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIWQGRVHCGLDDAINIAR 174
+ +++ P + +WI+++ + + R +K + E G+ + G H GLDD+ N+AR
Sbjct: 245 LSRLKYPPFAKKWISIQKSYGNFYKVPRSQIKLTIMLEKLGMDYDGWPHSGLDDSKNVAR 304
Query: 175 LLSVIMRRGFKFSITKSLTPQA 196
+ +++ G + + + + A
Sbjct: 305 IAVRMLQDGCELRVNEKMHAAA 326
>gi|25148199|ref|NP_741292.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
gi|45476772|sp|O44406.2|ERI1_CAEEL RecName: Full=3'-5' exonuclease eri-1; AltName: Full=Enhanced RNAi
protein
gi|351064943|emb|CCD73976.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
Length = 582
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + IDFE TC + +P EIIE P+V++ +II+ F+TYVRP P L++FC
Sbjct: 148 FDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCM 207
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWL--LQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+ T I Q VD EAL W+ +G N+ F+ VT D ++ +C +
Sbjct: 208 QFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLS 267
Query: 119 KIQKPAYFNQWINLRVPFSKVF-----GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I+ P F +IN++ F + F G+ + ++ +E L + G H GLDDA NIA
Sbjct: 268 NIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIA 327
Query: 174 RLLSVIMRRGFKFSITKSLTPQAN 197
+ +M+ + I + + + N
Sbjct: 328 AIAIQMMKLKIELRINQKCSYKEN 351
>gi|358333145|dbj|GAA37315.2| 3'-5' exoribonuclease 1 [Clonorchis sinensis]
Length = 643
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Query: 1 FEYYVVIDFEATCDKERNL-----HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
+ Y ++ID EATCD + + +P EIIEFP ++ + + + I F Y +P P L
Sbjct: 360 YSYLLIIDLEATCDFQEHRQSAPEYPHEIIEFPILLYNTRTRKCIGVFHAYCKPKLRPDL 419
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLL-QMGLNNTNFSVVTWSDWDCQVMLESE 114
T FC LT I QH+VDN L + WL + GL+N +VV D + +
Sbjct: 420 TAFCTSLTQISQHEVDNAHPFPHVLARIEDWLFNRHGLSNVRCAVVCDCGADMGKFMRIQ 479
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDV----RCNLKEAVELAGLIWQGRVHCGLDDAI 170
CR+ I P++ WINL F +VF + R L + L + G+ H GLDDAI
Sbjct: 480 CRLDGIPLPSWATVWINLSKAF-RVFYKLPLRNRVTLSTMLRDLNLSFIGQQHRGLDDAI 538
Query: 171 NIARLLSVIMRRG 183
NI R++ ++ G
Sbjct: 539 NILRIVRTLLADG 551
>gi|312092765|ref|XP_003147452.1| exonuclease [Loa loa]
Length = 401
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y+VVIDFE TC+ + + EIIEFP+++V EI+ F +YVRP P L++FC
Sbjct: 147 YDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKKEIVDVFHSYVRPLANPQLSEFCS 206
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
TGI Q VD + + L W L +G ++ VT WD + +C
Sbjct: 207 AFTGITQEMVDKALPFIDVLDSFRAWMQLHHLGQKEVRYAFVTDGPWDIAKFFQMQCIQS 266
Query: 119 KIQK-PAYFNQWINLRVPFS----KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
K+ P F ++N+R F+ K + NL + + ++GR H GLDD+ NIA
Sbjct: 267 KLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRMLTSLNMKFEGREHSGLDDSKNIA 326
Query: 174 RLL 176
+++
Sbjct: 327 KIV 329
>gi|393911376|gb|EFO16618.2| exonuclease [Loa loa]
Length = 388
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y+VVIDFE TC+ + + EIIEFP+++V EI+ F +YVRP P L++FC
Sbjct: 134 YDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKKEIVDVFHSYVRPLANPQLSEFCS 193
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
TGI Q VD + + L W L +G ++ VT WD + +C
Sbjct: 194 AFTGITQEMVDKALPFIDVLDSFRAWMQLHHLGQKEVRYAFVTDGPWDIAKFFQMQCIQS 253
Query: 119 KIQK-PAYFNQWINLRVPFS----KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
K+ P F ++N+R F+ K + NL + + ++GR H GLDD+ NIA
Sbjct: 254 KLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRMLTSLNMKFEGREHSGLDDSKNIA 313
Query: 174 RLLSVIMRRGFKFSITKSLT 193
+++ ++ + + + L
Sbjct: 314 KIVIRMLGDKSELRVNEKLV 333
>gi|298711928|emb|CBJ48615.1| phosphotransferase [Ectocarpus siliculosus]
Length = 528
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 21 PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEAL 80
P E+IEFP+V++ S +++ F+ YVRP P+LT FC LTGI+Q VD G+ EAL
Sbjct: 333 PMEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPILTPFCTSLTGIEQSTVDGGVLFEEAL 392
Query: 81 YFHDKWLLQ---MGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
H ++L + + + VT +WD + M+ ++C++ P +FN W N++ F
Sbjct: 393 SQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFR 452
Query: 138 KVF------------GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
V G + + GL+ +GR H GLDD NIAR+ + RR +
Sbjct: 453 DVMYRAARQSQRRPRGGKVGGMPAMLSALGLVLEGRHHSGLDDCRNIARIAIELCRRSRR 512
>gi|260805280|ref|XP_002597515.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
gi|229282780|gb|EEN53527.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
Length = 279
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+++ +VIDFEATC +E Q EIIEFP ++V+ + + F +Y RPT P LT FC
Sbjct: 65 YDFLLVIDFEATCMEENPPDFQHEIIEFPILLVNTETLIVEDQFHSYCRPTINPKLTPFC 124
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM--GLNNTNFSVVTWSDWDCQVMLESECRI 117
+LTGI Q VD + L W+ G+ ++ F+V T WD L +C
Sbjct: 125 TKLTGITQKMVDKAPEFPQVLEDVLDWMSSKGYGMGHSRFAVATDGPWDMCRFLYQQCLY 184
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I P F +WIN++ F+ F R L+E + GL ++G+ H G DDA+NIAR+
Sbjct: 185 CGIPYPRPFRRWINVKKHFAN-FYQTRGGTKLQEMLASLGLQFEGKPHSGRDDAVNIARI 243
Query: 176 LSVIMRRGFKFSITKSL 192
+++ G + + + L
Sbjct: 244 AGRLIQDGCELRVNECL 260
>gi|226481597|emb|CAX73696.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 9/207 (4%)
Query: 1 FEYYVVIDFEATCDKERNL-----HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y ++ID EATC+ + + +P EIIEFP ++ + + ++ F Y +P P L
Sbjct: 298 YDYLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVSVFHAYCKPRLHPNL 357
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM-GLNNTNFSVVTWSDWDCQVMLESE 114
++FC +LT IQQ QVDN + L ++WLL+ L ++V D + +
Sbjct: 358 SEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQKRCAIVCDCCADMSKFMRIQ 417
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
CR+ I P + WINL F + R L + GL + G+ H GLDDA+N
Sbjct: 418 CRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVTLNGMLHDLGLSFVGQRHRGLDDAVN 477
Query: 172 IARLLSVIMRRGFKFSITKSLTPQANP 198
I R++ V++ G + + + P
Sbjct: 478 ILRIVRVLLSDGCSLRVNERIDMNRPP 504
>gi|226481595|emb|CAX73695.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 9/207 (4%)
Query: 1 FEYYVVIDFEATCDKERNL-----HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y ++ID EATC+ + + +P EIIEFP ++ + + ++ F Y +P P L
Sbjct: 298 YDYLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVSVFHAYCKPRLHPNL 357
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQM-GLNNTNFSVVTWSDWDCQVMLESE 114
++FC +LT IQQ QVDN + L ++WLL+ L ++V D + +
Sbjct: 358 SEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQKRCAIVCDCCADMSKFMRIQ 417
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
CR+ I P + WINL F + R L + GL + G+ H GLDDA+N
Sbjct: 418 CRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVTLNGMLHDLGLSFVGQRHRGLDDAVN 477
Query: 172 IARLLSVIMRRGFKFSITKSLTPQANP 198
I R++ V++ G + + + P
Sbjct: 478 ILRIVRVLLSDGCSLRVNERIDMNRPP 504
>gi|328787319|ref|XP_003250924.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Apis mellifera]
Length = 241
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F Y +V+DFE TC K + PQEIIE P V S EI+ F Y++P P LT FC
Sbjct: 96 FNYLLVLDFECTCKKYEKIEPQEIIELPCAAVCTKSWEIVNMFHEYIKPKVHPQLTPFCT 155
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRIK 118
+LTGI Q VDN E WL + N + + V DWD + ML ++C+++
Sbjct: 156 QLTGIIQDMVDNESHFSEVFMKFCNWLEEHNYFKNGNDSAFVICGDWDLKFMLPAQCKLE 215
Query: 119 KIQKPAYFNQWINLRVPF 136
I P +F +WINL+ F
Sbjct: 216 NISFPTHFMKWINLKGAF 233
>gi|428315536|ref|YP_007113418.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
gi|428239216|gb|AFZ05002.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
Length = 189
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 102/183 (55%), Gaps = 10/183 (5%)
Query: 4 YVVIDFEATC-DKERNLH--PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y+V+D EATC D++ + E+IE +V+V + II FQ++++P P+LT+FCK
Sbjct: 9 YLVVDLEATCCDRQATIKQTEMEVIEIGAVMVEAKTLTIIDEFQSFIKPIRHPILTEFCK 68
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LT I Q QVD T EA+ WL G +N F +W D+D Q + + KI
Sbjct: 69 SLTSISQAQVDRAPTYPEAIALLKNWL--SGYSNGVFG--SWGDFDRQ-QFQQDSNFHKI 123
Query: 121 QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + +NL+ FS+ G R + +A+ LAGL +G H G+DDA NIA+LL I
Sbjct: 124 PFPIAYPH-VNLKQLFSQKQGLRKRHGMAKALTLAGLPLEGTHHRGIDDARNIAKLLPYI 182
Query: 180 MRR 182
+ R
Sbjct: 183 LER 185
>gi|300864441|ref|ZP_07109312.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
gi|300337585|emb|CBN54460.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
Length = 192
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 1 FEYYVVIDFEATC-DKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YY+V+D EATC D+E N EIIE +V+V + I+ FQT+++P P+LT+F
Sbjct: 10 YNYYLVLDLEATCCDRETINREHMEIIEIGAVMVEPKNLTIVDEFQTFIKPVRHPILTEF 69
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK LT I Q QVD T EA+ WL G +N F +W D+D + + +
Sbjct: 70 CKSLTSISQKQVDLAPTYPEAIALLKNWL--SGYSNAVFG--SWGDYDRK-QFQQDSNFH 124
Query: 119 KIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K+ P + +NL+ F++ G R + +A++L GL +G H G+DDA NIA+LL
Sbjct: 125 KVPFPIAYPH-VNLKQLFTEQQGLRKRPGMAKALQLVGLPLEGTHHRGIDDARNIAKLLP 183
Query: 178 VIM 180
I+
Sbjct: 184 YIL 186
>gi|398018617|ref|XP_003862473.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500703|emb|CBZ35780.1| hypothetical protein, conserved [Leishmania donovani]
Length = 880
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y +V+DFEATC++ HP EIIEFP VVV ++A F +VRP ++ L
Sbjct: 629 YDYLLVLDFEATCEE----HPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKREL 684
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
+ FC++LTG++Q VD +L E + ++WL + VT D + M
Sbjct: 685 SPFCQKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFMYYHS 744
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P+ F Q+I+++ F+ F + +K +E+ L ++GR+H GLDDA NIA
Sbjct: 745 VSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDARNIAS 804
Query: 175 LLSVIMRRGFKF 186
++ ++ G F
Sbjct: 805 IVIGLLHYGCSF 816
>gi|146092929|ref|XP_001466576.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070939|emb|CAM69615.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 880
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y +V+DFEATC++ HP EIIEFP VVV ++A F +VRP ++ L
Sbjct: 629 YDYLLVLDFEATCEE----HPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKREL 684
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
+ FC++LTG++Q VD +L E + ++WL + VT D + M
Sbjct: 685 SPFCQKLTGMRQEDVDTAASLEEVIRQFERWLSHTLPPHARCMFVTDGPMDLREFMYYHS 744
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P+ F Q+I+++ F+ F + +K +E+ L ++GR+H GLDDA NIA
Sbjct: 745 VSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDARNIAS 804
Query: 175 LLSVIMRRGFKF 186
++ ++ G F
Sbjct: 805 IVIGLLHYGCSF 816
>gi|47218928|emb|CAF98126.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 108/234 (46%), Gaps = 62/234 (26%)
Query: 19 LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGE 78
LHP +EFP+V+++ +GE+ + F YV+P P+L+ FC ELTGI Q QV+ I L
Sbjct: 5 LHP---VEFPAVLLNTSTGEVESEFHAYVQPQEHPILSAFCTELTGITQTQVEAAIPLHI 61
Query: 79 ALYFHDKWLLQM----GLNNTNF--------------SVVTWSDWDCQVMLESECRIKKI 120
L +WL ++ GL N + +TWSDWD V L+ ECR K+I
Sbjct: 62 CLSRFGRWLQELQVKTGLVFPNHPRTSAPSAASQKLCTFLTWSDWDLGVCLQYECRRKQI 121
Query: 121 QKPAYFNQWINLRVPFS----------------------------------------KVF 140
KP N WI+LR + ++F
Sbjct: 122 HKPDVLNSWIDLRSTYRVGGCLPSCLPAFLPSCLPAFLPSFLSFFVLALLYFTVCLFQLF 181
Query: 141 GDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLT 193
D + L A++ G+ + GR H GLDDA N A L + +MR G +T+SLT
Sbjct: 182 YDRKPRGLNGALQDLGIQFAGREHSGLDDARNTAGLAARMMRDGCVMKVTRSLT 235
>gi|154340904|ref|XP_001566405.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063728|emb|CAM39913.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 405
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEI--IACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC++ +P E+IE P V++ +G++ F TYV+P P LT F
Sbjct: 73 FDYIIVVDVEATCEQHNRNYPHEVIEIPGVLIDVRTGQVDRARSFHTYVKPWRNPRLTPF 132
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LTGI Q VD ++ EA+ +KW + WD + + ++
Sbjct: 133 CTQLTGITQEMVDAAPSITEAVQLFEKWYRETIPRGAKTIFAADGPWDFKNFIHEHHILR 192
Query: 119 K-IQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P+ F +++++R F+ ++ V L + L + GR H G DDA NIARL
Sbjct: 193 DHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMHLRFDGRPHSGFDDAYNIARLT 252
Query: 177 SVIMRRG 183
+M+ G
Sbjct: 253 VAMMKVG 259
>gi|312090123|ref|XP_003146498.1| exonuclease [Loa loa]
gi|393907516|gb|EJD74680.1| exonuclease, variant [Loa loa]
Length = 192
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC++ + P QEIIEFP + +SG + E I+ F YV+PT P+LT FC
Sbjct: 59 FDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKPTERPILTSFC 118
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN------TNFSVVTWSDWDCQVMLES 113
ELTGI Q V + +L E L DKWL+ L N ++F+ +T DWD V+L S
Sbjct: 119 TELTGIVQETVASQESLPEVLDAFDKWLINSNLINADHSMKSHFTFITCGDWDLGVLLPS 178
Query: 114 ECRIKKIQKP 123
E + ++ P
Sbjct: 179 EANYRNLKLP 188
>gi|389602001|ref|XP_001566397.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505274|emb|CAM39905.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 881
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHP-----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
+EY +V+DFEATC++ HP EIIEFP VVV ++A F +VRP ++ L
Sbjct: 630 YEYLLVLDFEATCEE----HPPHNYLHEIIEFPVVVVDVRLQRVVAEFHRFVRPRYKREL 685
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
+ FCK LTG++Q VD +L E + ++W + T D + M
Sbjct: 686 SSFCKRLTGMRQEDVDTAASLEEVILQFERWFSHTLPQHARCVFATDGPMDLREFMYHHS 745
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P F Q+I+++ F+ F + +K +E L ++GR+H GLDDA NIA
Sbjct: 746 VSRQGIRFPPLFYQFIDVKQTFACFFQCSQGKIKAMLEALHLPFEGRLHSGLDDARNIAS 805
Query: 175 LLSVIMRRGFKF 186
++ ++ G F
Sbjct: 806 IVIGLLHYGCTF 817
>gi|83643695|ref|YP_432130.1| inhibitor of the KinA pathway to sporulation, exonuclease [Hahella
chejuensis KCTC 2396]
gi|83631738|gb|ABC27705.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Hahella chejuensis KCTC 2396]
Length = 190
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 2 EYYVVIDFEATCDKERNLHPQEI--IEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+YY++ID EATC + ++ +E+ IE +V+V +S ++ QT++RP P LTDFC
Sbjct: 8 DYYLIIDLEATCCDQGSVPRREMETIEIGAVMVDAMSLAVVDELQTFIRPVRHPQLTDFC 67
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+ELT I+Q QVD+ T EA+ W+ + N+ +W D+D + E +C+ +
Sbjct: 68 RELTTIKQTQVDSAPTYPEAIESLQGWM----RHYPNYLFCSWGDYD-KGQFEQDCQFHR 122
Query: 120 IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P + + +N++ FS G + + A+ +AGL +G H G+DDA N+A+L+
Sbjct: 123 IAYP-FASGHLNIKKQFSATQGLKKKYGMAGALRVAGLSLEGSHHRGIDDARNMAKLMPY 181
Query: 179 IM 180
I+
Sbjct: 182 IV 183
>gi|401416026|ref|XP_003872508.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488732|emb|CBZ23979.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 879
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
++Y +V+DFEATC++ HP EIIEFP VVV ++A F +VRP ++ L
Sbjct: 628 YDYLLVLDFEATCEE----HPPPNYLYEIIEFPVVVVDVRLQRVVAEFHRFVRPRYKREL 683
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESE 114
+ FCK+LTG++Q VD +L E + ++WL + VT D + M
Sbjct: 684 SPFCKKLTGMRQEDVDAAASLEEVVRQFERWLSHTLPPHARCMFVTDGPMDLREFMYYHS 743
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ I+ P+ F Q+I+++ F+ F + +K +E+ L ++GR+H GLDDA NIA
Sbjct: 744 VSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVLHLPFEGRLHSGLDDARNIAS 803
Query: 175 LLSVIMRRGFKF 186
++ ++ G F
Sbjct: 804 IVIGLLHYGCSF 815
>gi|350535268|ref|NP_001232995.1| uncharacterized protein LOC100162389 [Acyrthosiphon pisum]
gi|239793057|dbj|BAH72792.1| ACYPI003543 [Acyrthosiphon pisum]
Length = 248
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV----SGVSGEIIACFQTYVRPTFEPLL 55
+ + V+DFEATCD +L PQEIIEFP ++V + E+++ F +YV+P +L
Sbjct: 46 YTKFFVLDFEATCDNGAHLLKPQEIIEFPCILVKFNMAKGGFEVVSIFHSYVKPIIHTVL 105
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWL---LQMGLNNTNFSVVTWSDWDCQVMLE 112
T++C +LTG+ Q V N + + W MG + +VT +WD M
Sbjct: 106 TEYCTQLTGVTQDMVSNSPPFDDVFFNFCNWHNDHTNMGKEKS--IIVTSGNWDIGNMFI 163
Query: 113 SECRI--KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
+C++ I+ P + WIN++ F+ G+ +K ++ G +H G+DD +
Sbjct: 164 EQCKLFPSTIKIPEFMCTWINIKKLFALTMGEYPLGIKSMLKTTNSKQFGNIHSGIDDCV 223
Query: 171 NIARLLSVIMRRGFKFSITKSL 192
NI +++ + +RG F T +
Sbjct: 224 NIITIMNQLSQRGCVFQATNKI 245
>gi|350586285|ref|XP_003128134.3| PREDICTED: ERI1 exoribonuclease 3-like [Sus scrofa]
Length = 232
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 65 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 123
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLE 112
ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VML+
Sbjct: 124 ELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLQ 177
>gi|402588418|gb|EJW82351.1| exonuclease [Wuchereria bancrofti]
Length = 384
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y+VVIDFE TC+ + + EIIEFP+V+V + F +YVRP P L++FC
Sbjct: 134 YDYFVVIDFECTCEADLYDYNHEIIEFPAVLVD------VDVFHSYVRPLANPQLSEFCS 187
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
TGI Q VD + + L W L ++G + ++ VT WD + +C
Sbjct: 188 VFTGITQEMVDKALPFIDVLDSFRTWMQLHRLGQKDVRYAFVTDGPWDIAKFFQMQCIQS 247
Query: 119 KIQK-PAYFNQWINLRVPFS----KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
K+ P F +IN+R F+ K + NL + + ++GR H GLDD+ NIA
Sbjct: 248 KLNAVPHDFRFYINIRRSFANKYCKKHSMQKINLGGMLTFLNMKFEGREHSGLDDSKNIA 307
Query: 174 RLLSVIMRRGFKFSITKSLT 193
R++ ++ + + + L
Sbjct: 308 RIVIKMLEDRSELRVNEKLV 327
>gi|291002083|ref|XP_002683608.1| exonuclease family protein [Naegleria gruberi]
gi|284097237|gb|EFC50864.1| exonuclease family protein [Naegleria gruberi]
Length = 366
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 1 FEYYVVIDFEATCDKERN----LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++Y V+IDFEATCD N QE+IEFP VV S E+I + YV+PT+ LT
Sbjct: 132 YDYLVIIDFEATCDNGVNPVITRDNQEMIEFPFVVFDLASMEVIHKERYYVKPTWSDKLT 191
Query: 57 DFCKELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC +LTGI ++ GI+L A+ ++ + + F ++T S+WD + +L E
Sbjct: 192 PFCTQLTGITDEILEKEGISLSNAIQNFHNYVKKTFTDGKTFCILTDSEWDIKGLLIKEA 251
Query: 116 RIKKIQKPAYFNQWINLRVPFSKV--FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
K I +YF + +LR +SK + VR LK V+ +GL + G+ H GL D + I+
Sbjct: 252 TTKGISFDSYFRTFYDLRKEYSKCYPYAFVR-GLKSMVDQSGLSFVGQHHSGLCDCLTIS 310
Query: 174 RLLSVIMRRGFKF 186
++ ++ G F
Sbjct: 311 EIVKRMIYDGHIF 323
>gi|261327263|emb|CBH10239.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 329
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F + +V DFEATCD + L+P EIIEFP V + ++A F +YV P P LT FC
Sbjct: 62 FSHLLVCDFEATCDADSAGLYPHEIIEFPVVCIDTAQLAVVAEFHSYVHPVRRPKLTAFC 121
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQ----------------------MGLNNTNF 97
KELTGI Q VD+ TL E + +W+ + +G F
Sbjct: 122 KELTGITQSVVDDAPTLPEVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDLEKKF 181
Query: 98 S-----------------VVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSK 138
T WD + + EC + + P F +W+++R F +
Sbjct: 182 KYDEKDNKEWVGCERMVCFTTDGPWDMRKFMH-ECSVVRDGHIFPPLFYRWVDVRKCFKQ 240
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGF 184
F L + + L ++G+ H G+DD+ NIAR+L +MRRGF
Sbjct: 241 HFNKWPRKLVDMLRTLRLDFEGKQHSGIDDSRNIARILIELMRRGF 286
>gi|389593763|ref|XP_003722130.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438628|emb|CBZ12387.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 405
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEI--IACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC++ +P E+IE P V+++ +G++ F T+V+P P LT F
Sbjct: 73 FDYIIVVDVEATCEQNNRNYPHEVIEIPGVLINVRTGQVDRARSFHTFVKPWRNPRLTPF 132
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LTGI Q VD ++ EA+ +KW + WD + + ++
Sbjct: 133 CTQLTGITQEVVDAAPSITEAIQLFEKWYWETIPRGAKTIFAADGPWDFKNFIHEHHILR 192
Query: 119 K-IQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P+ F +++++R F+ ++ V L + L + GR H G DDA NIARL
Sbjct: 193 DHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMNLRFDGRPHNGFDDAYNIARLA 252
Query: 177 SVIMRRG 183
+M+ G
Sbjct: 253 VAMMKAG 259
>gi|342180404|emb|CCC89881.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 385
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 106/230 (46%), Gaps = 37/230 (16%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRP L+ FCK
Sbjct: 114 FSHLLVCDFEATCDDYNVDYPHEIIEFPVVCVDTQQLRVVAEFHSYVRPVKCKQLSFFCK 173
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM---------------------GLNNTNFSV 99
ELTGI Q VD TL E + +WL + + V
Sbjct: 174 ELTGITQSTVDKAPTLPEVIKLFGEWLRDVVYPMCRQQQHQQSSRPKCSPAAERKFVYDV 233
Query: 100 VTWSDW-DCQVML-------------ESECRIKK--IQKPAYFNQWINLRVPFSKVFGDV 143
++W DC+ M+ EC + + P F +W+N+R F+ F
Sbjct: 234 AHNAEWVDCERMVCLATDGPWDMRKFMYECGVLRDGYAFPPLFYRWVNIRRCFACYFHTR 293
Query: 144 RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLT 193
L + +++ G + G+ H G+DDA NIAR+L +MRRG + +++
Sbjct: 294 PRKLTDMLKVLGFPFVGQQHSGIDDARNIARILIELMRRGCRIKDVSTIS 343
>gi|401416022|ref|XP_003872506.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488730|emb|CBZ23977.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEI--IACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC++ +P E+IE P V++ +G++ F T+V+P P LT F
Sbjct: 73 FDYIIVVDVEATCEQNARSYPHEVIEIPGVLIDVRTGQVDRARSFHTFVKPWRNPRLTPF 132
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LTGI Q VD ++ EA+ +KW + WD + + ++
Sbjct: 133 CTQLTGITQVVVDAAPSITEAIQLFEKWYRETIPRGAKTIFAADGPWDFKNFIHEHHILR 192
Query: 119 K-IQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P+ F +++++R F+ ++ V L + L + GR H G DDA NIARL
Sbjct: 193 DHVSFPSIFYEYLDIRTTFAHRLNHGVPIKLDAMLRKMNLRFDGRPHNGFDDAYNIARLA 252
Query: 177 SVIMRRG 183
+M+ G
Sbjct: 253 VAMMKAG 259
>gi|71417703|ref|XP_810632.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875193|gb|EAN88781.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 793
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +V+DFEATC++ LH EIIEFP V+V +A F +V+P P L++
Sbjct: 562 YDYLLVLDFEATCEESTPPSYLH--EIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSE 619
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ--VMLESEC 115
FC++LTGI+Q +DN + L + + ++W Q + + T D + + + S
Sbjct: 620 FCRQLTGIRQEDIDNALPLEDVIRRFERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVS 679
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
R + I+ P+ F QWI+++ F+ F + +K ++ ++GR+H G+DDA N+A +
Sbjct: 680 R-QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATI 738
Query: 176 LSVIMRRGFKF 186
+ +++ G F
Sbjct: 739 VIRMLKLGCSF 749
>gi|407832352|gb|EKF98422.1| hypothetical protein TCSYLVIO_010685 [Trypanosoma cruzi]
Length = 793
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +V+DFEATC++ LH EIIEFP V+V +A F +V+P P L++
Sbjct: 562 YDYLLVLDFEATCEESTPPSYLH--EIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSE 619
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ--VMLESEC 115
FC++LTGI+Q +DN + L + + ++W Q + + T D + + + S
Sbjct: 620 FCRQLTGIRQEDIDNALPLEDVIRRFERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVS 679
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
R + I+ P+ F QWI+++ F+ F + +K ++ ++GR+H G+DDA N+A +
Sbjct: 680 R-QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATI 738
Query: 176 LSVIMRRGFKF 186
+ +++ G F
Sbjct: 739 VIRMLKLGCSF 749
>gi|72387361|ref|XP_844105.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62360613|gb|AAX81024.1| exonuclease, putative [Trypanosoma brucei]
gi|70800637|gb|AAZ10546.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 291
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 43/226 (19%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F + +V DFEATCD + L+P EIIEFP V + ++A F +YV P P LT FC
Sbjct: 24 FSHLLVCDFEATCDADSAGLYPHEIIEFPVVCIDTAQLAVVAEFHSYVHPVRRPKLTAFC 83
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQ----------------------MGLNNTNF 97
KELTGI Q VD+ TL E + +W+ + +G F
Sbjct: 84 KELTGITQSVVDDAPTLPEVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDLGKKF 143
Query: 98 S-----------------VVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSK 138
T WD + + EC + + P F +W+++R F +
Sbjct: 144 KYDEKDNKEWVGCERMVCFATDGPWDMRKFMH-ECSVVRDGHIFPPLFYRWVDVRKCFKQ 202
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGF 184
F L + + L ++G+ H G+DD+ NIAR+L +MRRGF
Sbjct: 203 HFNKWPRKLVDMLRTLRLDFEGKQHSGIDDSRNIARILIELMRRGF 248
>gi|146181163|ref|XP_001022261.2| exonuclease family protein [Tetrahymena thermophila]
gi|146144274|gb|EAS02016.2| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 200
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+Y V+ DFE + EIIEFP V+V + +II F T+V+PT+ P LT+F K
Sbjct: 8 DYLVISDFECNSGM-KGFVLHEIIEFPIVIVDVKNKKIIKEFTTFVKPTYHPKLTNFIKN 66
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ---VMLESECRIK 118
LT I+Q VD T+ E + + Q NTN S T+ +DC L +E +K
Sbjct: 67 LTYIEQKDVDQAPTISEVF----EIITQEIKQNTNDSDSTFFIFDCDSDATYLRAEINLK 122
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ YFNQ+ NL+ F + F +L+ +++ L G H L DA NI +++
Sbjct: 123 NLKHSPYFNQYFNLKELFDRFFNVKAKSLENMLKILNLTQTGHPHIALHDARNICQVVMC 182
Query: 179 IMRRGFKFSITK 190
++ +G+ F T+
Sbjct: 183 MLEKGYIFDQTQ 194
>gi|145509679|ref|XP_001440778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408006|emb|CAK73381.1| unnamed protein product [Paramecium tetraurelia]
Length = 431
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 13/194 (6%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+ +++DFEATC +E + + QEIIEFP+ V + ++ FQ Y++P P+L+DFC
Sbjct: 234 FDNIIILDFEATCVRESDKKYLQEIIEFPAQVYNVQERKVKKEFQKYIKPVENPILSDFC 293
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGI Q QVD GI L +A+ ++ + GL ++T D+D +L+ E K
Sbjct: 294 TELTGITQQQVDEGILLDQAI--NEFIEFKQGLQKC--CILTCGDYDLH-LLKKEAARKG 348
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
I +IN++ F K + + C + E ++L GL GR H G+DD NI R
Sbjct: 349 IPISRELQYYINIKKVFPKSLRNPKDPKDPC-MVEMLKLCGLDLLGRHHSGIDDVKNITR 407
Query: 175 LLS-VIMRRGFKFS 187
++ +I + F+F
Sbjct: 408 IVHYLINEKNFQFD 421
>gi|407410780|gb|EKF33093.1| hypothetical protein MOQ_003040 [Trypanosoma cruzi marinkellei]
Length = 795
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERN---LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +V+DFEATC++ LH EIIEFP V+V +A F +V+P P L++
Sbjct: 564 YDYLLVLDFEATCEESTPPSYLH--EIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSE 621
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQ--VMLESEC 115
FC++LTGI+Q +DN + L + + ++W Q + + T D + + + S
Sbjct: 622 FCRQLTGIRQEDIDNALPLEDVIRRFERWHAQTIPPGSRTMLATDGPTDLKEFMYIHSVS 681
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
R + I+ P+ F QWI+++ F+ F + +K ++ ++GR+H G+DDA N+A +
Sbjct: 682 R-QGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALNCPFEGRLHSGIDDARNVATI 740
Query: 176 LSVIMRRGFKF 186
+ +++ G F
Sbjct: 741 VIRMLKLGCTF 751
>gi|255635608|gb|ACU18154.1| unknown [Glycine max]
Length = 197
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 54/60 (90%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y+VVIDFEATCDK++N HPQEIIEFPSV+VS ++G++ ACFQTYVRPT LLTDFCK
Sbjct: 137 FQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQTYVRPTCNQLLTDFCK 196
>gi|281202353|gb|EFA76558.1| putative RNase III [Polysphondylium pallidum PN500]
Length = 164
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y VV+DFEATC+ + QEIIEFPSV+V + +I+ F+ YV+P P L+ FC
Sbjct: 5 FKYIVVLDFEATCENGTKIAKQEIIEFPSVIVEVETCKIVDTFREYVKPVHNPRLSAFCT 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--------NNTNFSVVTWSDWDCQVMLE 112
ELTGIQQ VD T + H +WL++ L F+ +T DWD ML
Sbjct: 65 ELTGIQQAWVDEAQTFSVVMENHRQWLIKNQLLLPSGERSPVNTFTFLTCGDWDLNQMLP 124
Query: 113 SECRI---KKIQKPAYFNQWINLRVPFSK 138
+ + + P+YF +WIN++ F +
Sbjct: 125 VQYKFLAGSDGKWPSYFCEWINIKKSFEQ 153
>gi|395334652|gb|EJF67028.1| Exonuclease [Dichomitus squalens LYAD-421 SS1]
Length = 218
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
Y +V+DFEATCD ++ P+ EIIEFP+++ ++ A F YVRPT P LT
Sbjct: 21 LRYLLVLDFEATCDDSGHIVPRNETEIIEFPTLLYDVDEDKVHATFHEYVRPTRHPTLTP 80
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWL--LQMGLNNTNFSVVTWSDWDCQVMLESEC 115
FC ELTGI Q V+ + ++L ++ + +T DWD + ML +
Sbjct: 81 FCTELTGIGQSTVNAADPFPSVWERYQEFLRTREVLAQPEAVAYLTCGDWDLKTMLPQQL 140
Query: 116 RIKKIQK---------PAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCG 165
R+ Q A +N+WINL+ F +G + + A + +GR H G
Sbjct: 141 RLSGTQTGMDPSTNALTAPYNRWINLKKSFQHHYGLKYPKGMDGMLRHAKMELEGRHHSG 200
Query: 166 LDDAINIARLLSVIMRRG 183
+DD NI R++ + R G
Sbjct: 201 IDDCKNILRIVQRMRRDG 218
>gi|426215378|ref|XP_004001949.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Ovis aries]
gi|119627450|gb|EAX07045.1| prion protein interacting protein, isoform CRA_d [Homo sapiens]
gi|194375784|dbj|BAG57236.1| unnamed protein product [Homo sapiens]
gi|296488925|tpg|DAA31038.1| TPA: ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
Length = 160
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 S--VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAV 151
VT DWD +VML +C+ + YF QWINL+ +S G + ++ + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 152 ELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
L + GR H G+DD NIA ++ + RGF F T
Sbjct: 122 SLQHI---GRPHSGIDDCKNIANIMKTLAYRGFIFKQT 156
>gi|427725307|ref|YP_007072584.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
gi|427357027|gb|AFY39750.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
Length = 204
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
Query: 2 EYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+YY++ID EATC DK H EIIE +V++ + EI + +QT+V+P P LTDFC
Sbjct: 23 DYYLIIDLEATCCDDKSIPRHKMEIIEIGAVLLHSKTLEIESEYQTFVQPILNPTLTDFC 82
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K LT I Q V+ EA+ KWL ++ +W +D + E +C+
Sbjct: 83 KTLTSITQGDVNQAPHFPEAIQGLQKWLYPF----RSYVFCSWGKYD-KTQFERDCQRHN 137
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + ++ INL+ FS + + + A+E GL G H G+DDA NIAR++
Sbjct: 138 VDYP-FPSKHINLKKSFSAIISSSKKFGMNGALEKLGLPLIGTHHRGIDDARNIARIVQA 196
Query: 179 IMRR 182
+ +
Sbjct: 197 LKSK 200
>gi|146092931|ref|XP_001466577.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398018621|ref|XP_003862475.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070940|emb|CAM69616.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500705|emb|CBZ35782.1| hypothetical protein, conserved [Leishmania donovani]
Length = 405
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEI--IACFQTYVRPTFEPLLTDF 58
F+Y +V+D EATC++ +P E+IE P V++ +G++ F T+V+P LT F
Sbjct: 73 FDYIIVVDVEATCEQNSRNYPHEVIEIPGVLIDVRTGQVDRARSFHTFVKPWRNSRLTPF 132
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LTGI Q VD ++ EA+ +KW + WD + + ++
Sbjct: 133 CTQLTGITQEVVDAAPSITEAIQLFEKWYRETIPRGAKTIFAADGPWDFKNFIHEHHILR 192
Query: 119 K-IQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P+ F +++++R F+ V L + L + GR H G DDA NIARL
Sbjct: 193 DHVGFPSIFYEYLDIRTTFAHHLNHGVPIKLDAMLRKMNLRFDGRPHNGFDDAYNIARLA 252
Query: 177 SVIMRRG 183
+M+ G
Sbjct: 253 VAMMKAG 259
>gi|148698604|gb|EDL30551.1| prion protein interacting protein 1, isoform CRA_b [Mus musculus]
gi|149035533|gb|EDL90214.1| similar to prion protein interacting protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 160
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 S--VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAV 151
VT DWD +VML +C + YF QWINL+ +S G + ++ + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 152 ELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
L + GR H G+DD NIA ++ + RGF F T
Sbjct: 122 SLQHI---GRPHSGIDDCKNIANIMKTLAYRGFIFKQT 156
>gi|71396663|ref|XP_802406.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70862768|gb|EAN80960.1| exonuclease, putative [Trypanosoma cruzi]
Length = 310
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 94/217 (43%), Gaps = 41/217 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATCD +P EIIEFP V V ++A F +YVRPT P LT FC
Sbjct: 92 FSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNPRLTSFCT 151
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM--------------GLNN------------ 94
LTGI Q QVD L E L D WL ++ GLN
Sbjct: 152 ALTGITQAQVDAAPRLPEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVY 211
Query: 95 ------------TNFSVVTWSDWDCQVMLESECRIKKIQK--PAYFNQWINLRVPFSKVF 140
+VT WD + + EC + + P F +W+N+R F++ F
Sbjct: 212 DETHNPGWIDCERMICMVTDGPWDMRKFM-YECSVVRDGHLFPPLFYRWVNVRHSFAEHF 270
Query: 141 GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
L + + GL + G H G+DD+ +LS
Sbjct: 271 RMRPRKLNDMLRKLGLSFHGHPHSGIDDSRKYRPVLS 307
>gi|299753899|ref|XP_001833615.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
gi|298410514|gb|EAU88160.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
Length = 389
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 45/236 (19%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVV---------SGVSGEIIACFQTYVRPT 50
F+ ++V+D E TCD+ +L P EIIEFP ++ S E+I F+++VRPT
Sbjct: 140 FDMFLVLDIEGTCDQGSDLDFPNEIIEFPVCLLTWNDKGQDMSASELEVIDEFRSFVRPT 199
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN------TNFSVVTWSD 104
+ P+LTDFCK+LTGI Q QVD+ T E L + ++ + GL N F T
Sbjct: 200 WRPVLTDFCKDLTGITQEQVDSAPTFPEVLAQFEAFIKKNGLINDEGEPLVRFCWCTDGP 259
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWI-------------------------NLRVPFSKV 139
+D Q + +C I K+ P + + N+ VP +
Sbjct: 260 FDIQNFIIKQCFISKLPLPWWLKGNVLDVRTLVQHYVAKQTRSNHGHRGRSNVTVPSRRS 319
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQ 195
++ LK +EL +QGR H G+DD NIAR+L + +RG ++ PQ
Sbjct: 320 L-NIPAQLK-VLELQE--FQGRQHSGIDDTRNIARILVELGKRGVHLLPNTAIQPQ 371
>gi|301781889|ref|XP_002926359.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 2 [Ailuropoda
melanoleuca]
Length = 160
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 S--VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAV 151
VT DWD +VML +C+ + YF QWINL+ +S G + ++ + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 152 ELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
L + GR H G+DD NIA ++ + +GF F T
Sbjct: 122 SLQHI---GRPHSGIDDCKNIANIMKTLAYQGFIFKQT 156
>gi|389751881|gb|EIM92954.1| exonuclease RNase T and DNA polymerase III [Stereum hirsutum
FP-91666 SS1]
Length = 220
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 3 YYVVIDFEATCD-KERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+ ++DFEATC+ + EIIEFP+++ + + + A F YVRP P LTDFC +
Sbjct: 14 HLAILDFEATCELPSGSREEMEIIEFPTILYNLNTKRVQATFHEYVRPVIYPQLTDFCLD 73
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTWSDWDCQVMLESECRI-- 117
LTGI Q VD + +L G+ N++ + VT DWD + ML + +
Sbjct: 74 LTGISQETVDAADRFPAVWTRYLAFLKAQGVWENSSALAFVTCGDWDLKTMLPQQLGLSF 133
Query: 118 ------KKIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDA 169
K + F +WIN++ F V+G R L ++ + QGR H G+DD
Sbjct: 134 ADDATKKHETEHVLFKRWINIKRSFHSVYGGKRRPSGLISMLKALAITHQGRHHSGIDDC 193
Query: 170 INIARLLSVIMRRGFK 185
N+ ++ + G+K
Sbjct: 194 QNLLSIVERMREDGWK 209
>gi|323451416|gb|EGB07293.1| hypothetical protein AURANDRAFT_14950 [Aureococcus anophagefferens]
Length = 191
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 7 IDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQ 66
+DFE TC+ + + EIIEFP V+ + EI F +YVRPT L+ FC +LTGI+
Sbjct: 1 LDFECTCEPGWD-YIHEIIEFPVVLFDTRTREITDSFHSYVRPTENATLSAFCTDLTGIE 59
Query: 67 QHQVDNGITLGEALYFHDKWLLQMGLNN----TNFSVVTWSDWDCQVMLESECRIKKIQK 122
Q VD TL E L D WL GL +F++ T WD + L+ E K + K
Sbjct: 60 QATVDAAPTLPEVLDDLDAWLRARGLVGAEPAASFALAT-DGWDLEHFLDVELSRKLLYK 118
Query: 123 PA-YFNQWINLRVPFS--KVFGDVR-----------CNLKEAVELAGLIWQGRVHCGLDD 168
P Y ++W++L F + DV NL + + ++GR+H G+DD
Sbjct: 119 PGDYLDRWVDLSKAFDLRRAAKDVENGRKKGRSRRRSNLNTMLRHHKMEFEGRLHSGIDD 178
Query: 169 AINIARL 175
A N+AR+
Sbjct: 179 ATNLARV 185
>gi|268577613|ref|XP_002643789.1| Hypothetical protein CBG02000 [Caenorhabditis briggsae]
Length = 299
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFE TC+K+ + +P EII+F SV V +II F YVRP P LTD
Sbjct: 9 FDNLLILDFEGTCEKDDHDYPSEIIQF-SVCVLNTRDKIIREDVSFNKYVRPVINPKLTD 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
FC ELTGI Q +DN T E WL + F++V S D + + + +
Sbjct: 68 FCAELTGIDQDTIDNARTFPEVYNQFCAWLKEHDFQEKRFAIVCDSRQDMWRLAQYQFLL 127
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIW----------QGRVHCGLD 167
K P F QW+NL + + + D+R ++ LI +G+ H +D
Sbjct: 128 NKQPFPTIFRQWVNLSLYYRQ---DLRMAQQQDAVHQSLIERMSAFYNIPNEGQAHNAMD 184
Query: 168 DAINIARLLSVIMRRGFKFSITKSL 192
D +A++ I+ G +I +SL
Sbjct: 185 DCSFLAKVTKRILDNGTFVNINESL 209
>gi|308456231|ref|XP_003090574.1| CRE-ERI-1 protein [Caenorhabditis remanei]
gi|308262483|gb|EFP06436.1| CRE-ERI-1 protein [Caenorhabditis remanei]
Length = 584
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y + DFE TC + +P EIIE P+V++ +I++ F++YVRP P L++FC
Sbjct: 143 FDYLIAADFECTCVEVIYDYPHEIIELPAVLIDVREMKIVSEFRSYVRPVKNPKLSEFCI 202
Query: 61 ELTG----------------IQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTW 102
+ T I Q VD EAL +W+ GL NT F+ VT
Sbjct: 203 QFTSRWPPLLVPSLIDFLPEIAQETVDEAPYFREALDRLIQWMRHFGLGEKNTRFAFVTD 262
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVF-----GDVRCNLKEAVELAGLI 157
D ++ +C + I+ P F +IN++ F + F G+ + ++ +E L
Sbjct: 263 GPHDMWKFMQFQCLLSNIRMPHMFRNFINIKKTFKEKFNGLVKGNGKSGIENMLERLELS 322
Query: 158 WQGRVHCGLDDAINIARLLSVIMRRGFKFSITK 190
+ G H GLDDA NIA++ +M+ + I +
Sbjct: 323 FIGNKHSGLDDARNIAQIAIQMMKLKIELRINQ 355
>gi|328773880|gb|EGF83917.1| hypothetical protein BATDEDRAFT_33990 [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 32/194 (16%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ Y+V D EATCD + E+IEFP + + G + E ++ F+ Y RP P LTDFC
Sbjct: 78 YRIYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRPILHPTLTDFC 137
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQM-----GLNNTNFSVVTWSD--WDCQVMLE 112
K+LTGI Q Q D +W+L + G++ V+ +D WD + LE
Sbjct: 138 KQLTGITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDLRDFLE 197
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
E IQ+P + + R ++ A W R HCG DDA N+
Sbjct: 198 KEFIYSNIQRPDFIH---------------ARSSISAA-------W--REHCGFDDASNV 233
Query: 173 ARLLSVIMRRGFKF 186
AR+L ++ G +
Sbjct: 234 ARILRRMVEDGHRI 247
>gi|427709554|ref|YP_007051931.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
gi|427362059|gb|AFY44781.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
Length = 188
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y +V+D EATC + + H EIIE +V+V + +I FQT+++P P+LTDF
Sbjct: 7 YDYLLVLDLEATCCDQGTIKRHEMEIIEIGAVMVEAQNLTVIDEFQTFIKPVRYPILTDF 66
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK LT I Q VD EA+ KWL N +W D+D + + + +
Sbjct: 67 CKSLTSITQIYVDQAPGYPEAIAILQKWLSHY----PNAVFGSWGDYD-RNQFKQDSKFH 121
Query: 119 KIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + INL+ FS+ R + EA++L + QG H G+DDA NIA+LL
Sbjct: 122 NLPFPIAYPH-INLKQHFSESQSLSKRYGMAEALQLVNIELQGTHHRGIDDARNIAKLLP 180
Query: 178 VIMRR 182
I+ R
Sbjct: 181 WILNR 185
>gi|194767427|ref|XP_001965817.1| GF20552 [Drosophila ananassae]
gi|190618417|gb|EDV33941.1| GF20552 [Drosophila ananassae]
Length = 159
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 15/150 (10%)
Query: 67 QHQVDNGITLGEALYFHDKWLLQ-----------MGLNNT--NFSVVTWSDWDCQVMLES 113
Q VD G+ L AL +WL + M +N N + VTW+DWD + L
Sbjct: 9 QKTVDGGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVTWTDWDFGICLAK 68
Query: 114 ECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+C K++ K AYFNQWI++R + + CN +A+ GL ++ R H G+DDA N+
Sbjct: 69 KCTRKRMCKAAYFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLAFERRAHSGIDDAKNLG 128
Query: 174 RLLSVIMRRGFKFSITKSLTP--QANPNCL 201
L+ ++ G FSITK LTP Q N NC+
Sbjct: 129 ALMCTMVSDGALFSITKDLTPYQQLNANCI 158
>gi|390594208|gb|EIN03621.1| hypothetical protein PUNSTDRAFT_146951 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 285
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 34/226 (15%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVV--------SGVSGE--IIACFQTYVRP 49
++ +VID EATC + P EIIE+P ++ SGV+ + I+ F+ +V+P
Sbjct: 36 YDALLVIDVEATCQAGTDFAWPNEIIEWPVCLMRWMDKDGPSGVAKDLRIVDEFRAFVKP 95
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-------FSVVTW 102
T+ P+L+ FC ELTGI+Q VD+ T E L +L++ GL + F +
Sbjct: 96 TWRPVLSKFCTELTGIEQADVDSAPTFPEVLASFRGFLVKNGLLDAETDERLCRFCFSSD 155
Query: 103 SDWDCQVMLESECRIKKIQKPA-----YFNQWINLRVPFSKVFGD-VRCNLKEAVELAGL 156
WD + L +C I KI P + + I ++ K F D R +L + +
Sbjct: 156 GPWDLRDFLVKQCFISKIDIPPWIPIDFLDTRIVVQGHVRKDFPDGSRVHLNKRARSPSI 215
Query: 157 IWQ----------GRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
+ Q GR HCG+DDA N+AR+L+ + RRG K S+
Sbjct: 216 VAQLRGLGLEPFAGRQHCGIDDARNVARILAELGRRGAKLQPNSSI 261
>gi|449551211|gb|EMD42175.1| hypothetical protein CERSUDRAFT_90779 [Ceriporiopsis subvermispora
B]
Length = 210
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+Y +++DFEATC + P EIIEFP+++ E+ A F YVRP P LT FC
Sbjct: 10 LQYLLILDFEATCGDDLR-GPPEIIEFPTLLYDIQKDEVQATFHEYVRPIISPTLTAFCT 68
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV--VTWSDWDCQVMLESECRIK 118
+LTGI Q VD E +L G+ + S +T DWD + ML + +
Sbjct: 69 KLTGITQDTVDAAQPFPEVWSRFQDFLRSHGIYDAAESAAFLTCGDWDLKTMLPRQLALS 128
Query: 119 KIQK---------PAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ + P Y N+WIN++ F K +G + ++ + L +GR H G+DD
Sbjct: 129 ESEHGLDEAGDLIPPY-NRWINIKQAFRKQYGMRYQNDMLGMLRKLRLELEGRHHSGIDD 187
Query: 169 AINIARLLSVIMRRGFK 185
N+ +++ + G+K
Sbjct: 188 CKNVLQIVRKMRAEGWK 204
>gi|399520121|ref|ZP_10760897.1| exonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111562|emb|CCH37456.1| exonuclease [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 182
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V GV G FQ V+P P LTDFC+E
Sbjct: 3 HWLVIDLEATTDEGGWAMEEMEIIEIGASLV-GVDGHERDHFQRIVKPQRRPCLTDFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q ++D+ TL + ++WL Q +S +W D+D + LE E R ++
Sbjct: 62 LTHITQAEIDSAATLSQVWAQFERWLTQHAPRLVGWS--SWGDYDRR-QLEQEWRQHQLH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAG+ +QG+ H L+DA N ARLL +++
Sbjct: 119 SLLAQVPHLNLKQAFAKARQLQRPVGLHSALQLAGMQFQGQQHRALEDARNTARLLPLVL 178
>gi|297298942|ref|XP_002805307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Macaca mulatta]
Length = 340
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 42 CFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVV 100
FQ YVRP L+DFC LTGI Q QVD T + L W+ L +S++
Sbjct: 160 TFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKELGTKYKYSIL 219
Query: 101 TWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--ELAGLIW 158
T WD L +C++ +++ P + +WIN+R + + R K + E G+ +
Sbjct: 220 TDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDY 279
Query: 159 QGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
GR HCGLDD+ NIAR+ +++ G + I + +
Sbjct: 280 DGRPHCGLDDSKNIARIAVRMLQDGCELRINEKI 313
>gi|114053091|ref|NP_001039944.1| ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
gi|82571565|gb|AAI10160.1| Exoribonuclease 3 [Bos taurus]
Length = 160
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
EI + F YV+P P LT FC ELTGI Q VD +L + L D+W+ + GL + N
Sbjct: 2 EIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV 61
Query: 98 S--VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAV 151
VT DWD +VML +C+ + YF QWINL+ +S G + ++ + +
Sbjct: 62 KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGL 121
Query: 152 ELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
L + GR H G+DD NIA ++ + R F F T
Sbjct: 122 SLQHI---GRPHSGIDDCKNIANIMKTLAYRCFIFKQT 156
>gi|219109276|pdb|3CG7|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109277|pdb|3CG7|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109290|pdb|3CM5|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109291|pdb|3CM5|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109292|pdb|3CM6|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
gi|219109293|pdb|3CM6|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
Length = 308
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFE T D +P E+I+F ++V V + I F YV+P LT
Sbjct: 18 FDTLLILDFETTSDAANQDYPCEVIQF-AIVAYDVPNDKIREDISFNKYVKPVLNRTLTK 76
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C + TGI Q +D T +WL+ +GL F+ V S D + + + ++
Sbjct: 77 NCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKL 136
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-------DVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
IQ PA+F Q+INL F+ N+ + E L GR H +DD +
Sbjct: 137 SNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCL 196
Query: 171 NIARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRH 206
NIA +L ++ G K ++ + LT C +W R
Sbjct: 197 NIATILQRMINMGAKVTVNELLT-----CCASWRRQ 227
>gi|162449255|ref|YP_001611622.1| exonuclease [Sorangium cellulosum So ce56]
gi|161159837|emb|CAN91142.1| predicted exonuclease [Sorangium cellulosum So ce56]
Length = 191
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 3 YYVVIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+++VID EATCD+E + + EIIE +V+V G + E ++ T+VRP P LT+FC
Sbjct: 7 FFLVIDLEATCDEEGRIPERIMEIIEIGAVLVDGATLEPVSELATFVRPVIRPRLTEFCT 66
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LT I Q VD T EA+ +++ G F +W D+D + + E +
Sbjct: 67 KLTTITQADVDAAPTFPEAIAALGRFV---GQREALFC--SWGDYDRK---QFEIDAARW 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P +N++ FS G R + A+E GL G H G+DDA NIAR+L
Sbjct: 119 GVPLPLQGHMNIKKRFSAALGVTQRYGMASALERLGLPLHGTHHRGIDDARNIARILP-- 176
Query: 180 MRRGFKFSITKSLTPQANP 198
++I + P+A P
Sbjct: 177 ------YAIGRVPIPEAGP 189
>gi|17548214|ref|NP_508415.1| Protein CRN-4 [Caenorhabditis elegans]
gi|2496805|sp|Q10905.1|CRN4_CAEEL RecName: Full=Cell death-related nuclease 4; Flags: Precursor
gi|31747257|gb|AAP57300.1| cell death-related nuclease 4 [Caenorhabditis elegans]
gi|351065238|emb|CCD61184.1| Protein CRN-4 [Caenorhabditis elegans]
Length = 298
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFE T D +P E+I+F ++V V + I F YV+P LT
Sbjct: 8 FDTLLILDFETTSDAANQDYPCEVIQF-AIVAYDVPNDKIREDISFNKYVKPVLNRTLTK 66
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C + TGI Q +D T +WL+ +GL F+ V S D + + + ++
Sbjct: 67 NCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKL 126
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-------DVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
IQ PA+F Q+INL F+ N+ + E L GR H +DD +
Sbjct: 127 SNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCL 186
Query: 171 NIARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRH 206
NIA +L ++ G K ++ + LT C +W R
Sbjct: 187 NIATILQRMINMGAKVTVNELLTC-----CASWRRQ 217
>gi|75812567|ref|YP_320186.1| exonuclease [Anabaena variabilis ATCC 29413]
gi|75705323|gb|ABA24997.1| Exonuclease [Anabaena variabilis ATCC 29413]
Length = 192
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y++V+D EATC + + H EIIE +V+V + +I+ FQT+++P P+LT+F
Sbjct: 7 FDYFLVLDLEATCCDKGTIKRHEMEIIEIGAVMVEAQTLKILDEFQTFIKPIRHPILTEF 66
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK LT I Q QVD+ EA+ +WL + N +W D+D + + + +
Sbjct: 67 CKLLTSITQTQVDHAPEYPEAIAMLKQWLSKY----PNAVFGSWGDYD-RNQFKQDSKFH 121
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDV--RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P + INL+ FS+ D+ R + EA++L + +G H G+DDA NIA+LL
Sbjct: 122 NILFPIAYPH-INLKQMFSES-QDLPKRYGMAEALQLVNIELEGIHHRGIDDAKNIAKLL 179
Query: 177 SVIM 180
I+
Sbjct: 180 PWIL 183
>gi|291000550|ref|XP_002682842.1| predicted protein [Naegleria gruberi]
gi|284096470|gb|EFC50098.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 15/203 (7%)
Query: 1 FEYYVVIDFEAT----CDKERNLHPQEIIEFPSVVVSGVSGE---IIACFQTYVRPTFEP 53
F+Y V+DFEA C RN + EIIEFPSV++ S + ++ Q YV+ P
Sbjct: 1 FKYICVLDFEAVFADDCKTNRN-YDMEIIEFPSVLLKFESEKQLVVVDEIQNYVKTRRIP 59
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLL-QMGLNNT--NFSVVTWSDWDCQVM 110
+ + C +LTGI Q V++G++ EAL H++WL+ +G T N + T DWD + M
Sbjct: 60 KINEECTKLTGITQEMVESGVSFEEALKRHNEWLMSHLGEKPTKDNILMATCGDWDLKTM 119
Query: 111 LESECRIKKIQKP---AYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVHCGL 166
+ + +K ++F QW N++ F+K + + N + + L G+ H G+
Sbjct: 120 IPHQVFFEKQTISLIGSHFTQWCNVKDVFAKFYNMEKVNGMLTMLNALKLPLLGKHHSGI 179
Query: 167 DDAINIARLLSVIMRRGFKFSIT 189
DD NIAR++ + ++G F+ T
Sbjct: 180 DDCKNIARVVCKMAQQGCHFNAT 202
>gi|434384994|ref|YP_007095605.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
gi|428015984|gb|AFY92078.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
Length = 192
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+++ +V+D EATC +++ H E IE +V+VS + I+ FQT+++P P+LT+F
Sbjct: 9 YQHILVVDLEATCCDLQSIPRHQMETIEIGAVMVSTDNLAIVDEFQTFIKPIRHPILTEF 68
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LT I Q QV+ T +A+ WL Q + T F +W D+D + L+ + +
Sbjct: 69 CLQLTSITQQQVNTAPTFPDAIELWQPWLSQ--FDKTIFG--SWGDYDRK-QLQQDSKHH 123
Query: 119 KIQKP-AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+I P + INL+ FS G + R + +A+ L + G H G+DDA NI++LL
Sbjct: 124 RIDLPYPVSSHHINLKELFSTAQGLNKRYGMAQALNLVNIDLTGTHHRGIDDARNISKLL 183
Query: 177 SVIMRR 182
I+ R
Sbjct: 184 PFILGR 189
>gi|313217587|emb|CBY38652.1| unnamed protein product [Oikopleura dioica]
gi|313232309|emb|CBY09418.1| unnamed protein product [Oikopleura dioica]
Length = 627
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 2 EYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+Y+V IDFEATC++ +P EIIEFP+ +V S +I+ F +YVRP + L+DFC
Sbjct: 85 KYFVCIDFEATCERNNTFNYPHEIIEFPACLVHIESRKIVGEFHSYVRPFRKAHLSDFCM 144
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL-------------NNTNFSVVTWSDWDC 107
ELTGI Q +VD + WL GL + +++++T S D
Sbjct: 145 ELTGITQEKVDQAPYFPQVFKQFVGWLRSYGLLDQTSDGRVKISKHTPSWTLLTDSPADI 204
Query: 108 QVMLESECRIKKIQKP-AYFNQWINLRVPFSKVFGD----VRCNLKEAVELAGLIWQGRV 162
L +C + I P + +++ N++ F V+ +++ +E+ G+ +G +
Sbjct: 205 CKFLAKQCEMDDIAFPYNWASRYCNIKKIFMSVYKPKYHRFTPKIEDMLEILGMEMRGDL 264
Query: 163 HCGLDDAINIARLLSVIMRRG 183
H G DDA NI R+ +++ G
Sbjct: 265 HSGKDDARNICRIAIRLIKDG 285
>gi|401416028|ref|XP_003872509.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488733|emb|CBZ23980.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 502
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATC +P EIIEFP VV+ + I+A F YVRP P LT FC
Sbjct: 220 FSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAFCT 279
Query: 61 ELTGIQQHQVDNGITLGEALY-FHD-----------KWLLQMGLN--------------- 93
ELTGI Q VD L + F D W G N
Sbjct: 280 ELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRFVY 339
Query: 94 ---------NTNFS----VVTWSDWDCQVMLESECRIKK--IQKPAYFNQWINLRVPFSK 138
NT+ + T WD + + EC + + + P ++IN+R +S
Sbjct: 340 DEHTDAAKANTSAEAMVCMATDGPWDMRRFMH-ECSVLRDGVAFPPVCYRYINVRHSYSD 398
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
F + L ++ + ++GR H G+DD NIAR+L+ + RG++
Sbjct: 399 HFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYR 445
>gi|398018615|ref|XP_003862472.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500702|emb|CBZ35779.1| hypothetical protein, conserved [Leishmania donovani]
Length = 502
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATC +P EIIEFP VV+ + I+A F YVRP P LT FC
Sbjct: 220 FSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAFCT 279
Query: 61 ELTGIQQHQVDNGITLGEALY-FHD-----------KWLLQMGLN--------------- 93
ELTGI Q VD L + F D W G N
Sbjct: 280 ELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRFVY 339
Query: 94 ---------NTNFS----VVTWSDWDCQVMLESECRIKK--IQKPAYFNQWINLRVPFSK 138
NT+ + T WD + + EC + + + P ++IN+R +S
Sbjct: 340 DEHTDAAKANTSAEAMICMATDGPWDMRRFMH-ECSVLRDGVDFPPVCYRYINVRHSYSD 398
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
F + L ++ + ++GR H G+DD NIAR+L+ + RG++
Sbjct: 399 HFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYR 445
>gi|146092927|ref|XP_001466575.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070938|emb|CAM69614.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 502
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATC +P EIIEFP VV+ + I+A F YVRP P LT FC
Sbjct: 220 FSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAFCT 279
Query: 61 ELTGIQQHQVDNGITLGEALY-FHD-----------KWLLQMGLN--------------- 93
ELTGI Q VD L + F D W G N
Sbjct: 280 ELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNRLSHNLKSEQRRFVY 339
Query: 94 ---------NTNFS----VVTWSDWDCQVMLESECRIKK--IQKPAYFNQWINLRVPFSK 138
NT+ + T WD + + EC + + + P ++IN+R +S
Sbjct: 340 DEHTDAAKANTSAEAMICMATDGPWDMRRFMH-ECSVLRDGVDFPPVCYRYINVRHSYSD 398
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
F + L ++ + ++GR H G+DD NIAR+L+ + RG++
Sbjct: 399 HFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYR 445
>gi|429213820|ref|ZP_19204984.1| putative exonuclease [Pseudomonas sp. M1]
gi|428155415|gb|EKX01964.1| putative exonuclease [Pseudomonas sp. M1]
Length = 179
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + EIIE + +V+ G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVEEMEIIEIGASLVAAADGRELDHFQRFVRPQRRPLLTSFCRE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD L E ++WL Q ++ +W D+D + LE E R + I
Sbjct: 63 LTHISQADVDGAAPLTEVWPQFERWLAQHSPRLAGWA--SWGDYDRR-QLELEWRQQHID 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ R L A++LAGL +QG+ H L+DA N ARLL + +
Sbjct: 120 SHLSQVPHLNLKQRFAQARQLKRPVGLNTALQLAGLHFQGQQHRALEDARNTARLLPLAL 179
>gi|389593757|ref|XP_003722127.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438625|emb|CBZ12384.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 502
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 43/235 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATC +P EIIEFP VV+ + I+A F YVRP P LT FC
Sbjct: 220 FSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAFCT 279
Query: 61 ELTGIQQHQVDNGITLGEALY-FHD-----------KWLLQMGLN--------------- 93
ELTGI Q VD L + F D W G N
Sbjct: 280 ELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCWMWARHYGPNRLSHNLKSEQRRFVY 339
Query: 94 ---------NTNFS----VVTWSDWDCQVMLESECRIKK--IQKPAYFNQWINLRVPFSK 138
NT+ + T WD + + +C + + + P ++IN+R +S
Sbjct: 340 DEHTDAAKANTSAEAMVCMATDGPWDMRRFMH-QCSVLRDGVDFPPVCYRYINVRHSYSD 398
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLT 193
F + L ++ + ++GR H G+DD NIAR+L+ + RG++ ++T
Sbjct: 399 HFKCRQAKLTHMLKKMSMSFEGRRHSGIDDTRNIARVLAELFARGYRVHHVSTIT 453
>gi|154340886|ref|XP_001566396.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063719|emb|CAM39904.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 508
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 43/227 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F + +V DFEATC +P EIIEFP VV+ + I+A F YVRP P LT FC
Sbjct: 226 FSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLRNPKLTAFCT 285
Query: 61 ELTGIQQHQVDNGITLGEAL-YFHD-----------KWLLQMGLNNTNFSV--------- 99
ELTGI Q VD L + F D W G N+ + ++
Sbjct: 286 ELTGITQEMVDLADPLPMVVAQFQDWLRTEVYPLCRMWARHYGPNHLSHNLKSEQRRFVY 345
Query: 100 -------------------VTWSDWDCQVMLESECRIKK--IQKPAYFNQWINLRVPFSK 138
T WD + + EC + + + P ++IN+R +S
Sbjct: 346 DELTDAAKANVSAEAMLCMATDGPWDMRRFMH-ECSVLRDGVDFPPVCYRYINIRHSYSH 404
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
F + L ++ + ++GR H G+DD NIAR+L+ + RG++
Sbjct: 405 HFKCRQVRLTHMLKQMSMSFEGRRHSGIDDTRNIARVLAELFARGYR 451
>gi|326204418|ref|ZP_08194276.1| Exonuclease RNase T and DNA polymerase III [Clostridium
papyrosolvens DSM 2782]
gi|325985450|gb|EGD46288.1| Exonuclease RNase T and DNA polymerase III [Clostridium
papyrosolvens DSM 2782]
Length = 187
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 13/181 (7%)
Query: 5 VVIDFEATC-DK-ERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+ +D EATC DK E+N P EIIE +VV +G I+ F +RP EP+L+D+CKE
Sbjct: 3 IFVDLEATCWDKNEKNKRPHAEIIEIGAVV-TGQDLIEISKFSVVIRPEIEPVLSDYCKE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LTG+ Q V+NG+ A+ +W+L+ N N + TW D+D +L+ R K +
Sbjct: 62 LTGLSQTDVENGMEFNRAISHLYQWILKYE-NMENTVLYTWGDYDI-FLLKRSLRRHKYK 119
Query: 122 KPAYFN-----QWINLRVPFSKV--FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ + INL+ F K CNL +A+++ G + G++H +DDA N+ +
Sbjct: 120 NKDFLSIIHKGGLINLQEQFMKFTKLPSSSCNLVKALQIIGENYHGKMHRSVDDAENMIK 179
Query: 175 L 175
L
Sbjct: 180 L 180
>gi|310641105|ref|YP_003945863.1| 3'-5' exonuclease [Paenibacillus polymyxa SC2]
gi|386040175|ref|YP_005959129.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
gi|309246055|gb|ADO55622.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
gi|343096213|emb|CCC84422.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
Length = 177
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y++ D EATC + EIIE +V V+ V+ EII FQT+++P P L+DFCK LT
Sbjct: 3 YIIFDLEATCWENDRTRQNEIIEIGAVKVN-VNLEIIGEFQTFIKPKLNPQLSDFCKSLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q +D +A+Y +W + + + +W +D + L+ +C + KI +
Sbjct: 62 SISQQDIDMATYFPQAIYKFQEW-----IGKEPYYLCSWGFYD-KSQLKKDCELHKI-RT 114
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ I+++ K+ G+ R ++ A+++ L +G H G+DDA NI+R+ I R
Sbjct: 115 EWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISRIFVKIFDR 174
>gi|313226631|emb|CBY21776.1| unnamed protein product [Oikopleura dioica]
gi|313240006|emb|CBY32366.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 56/244 (22%)
Query: 1 FEYYVVIDFEATC------------------DKERNLHP-------------QEIIEFPS 29
F++ +VIDFEA+C D E L+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDYENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 30 VVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA---------- 79
V+V+ + EII+ F +VRP P L+DFCK+LT +++ + TL E
Sbjct: 63 VLVNLSTEEIISEFHEFVRPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 80 ------LYFHDKWLLQMGLNNTN--FSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWIN 131
LYF+ + + ++ + TW+DWD L SE + KKI+ P W++
Sbjct: 123 VQKEHDLYFYTPKAAKENIKSSKRIACICTWTDWDISSQLLSETKRKKIEIPEMLKSWVD 182
Query: 132 LRVPFSKVFGDVRCN------LKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
LR V L+ + + W+G+ H G+DDA N AR L+V M K
Sbjct: 183 LRAVSRVYLQSVNKKMEHIPVLRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLK 241
Query: 186 FSIT 189
+ T
Sbjct: 242 VTRT 245
>gi|158341366|ref|YP_001522531.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158311607|gb|ABW33217.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 194
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++YY+++D EATC ++ H + E IE +V+V V EII F +++P P LTDF
Sbjct: 8 YDYYLIVDLEATCCNTFSIPHKETETIEIGAVIVESVGLEIIDEFTVFIKPIRHPKLTDF 67
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C ELT I+Q +++ T +A+ +W Q N +W D+D + LE E +
Sbjct: 68 CTELTTIKQTDLEDAPTFPQAVGTFKRWFEQY----ENSVFCSWGDYD-KNQLERESKYH 122
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
KI P + NL+ FS + + +A+ GL G H G+DDA N+A+L+
Sbjct: 123 KIPYPMG-EEHFNLKKQFSLALRTKKHYGMAKALMTVGLSLDGTHHRGIDDARNLAKLMP 181
Query: 178 VIMRR 182
I+ R
Sbjct: 182 FIIGR 186
>gi|146307535|ref|YP_001188000.1| exonuclease [Pseudomonas mendocina ymp]
gi|421502231|ref|ZP_15949186.1| exonuclease [Pseudomonas mendocina DLHK]
gi|145575736|gb|ABP85268.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas mendocina
ymp]
gi|400347078|gb|EJO95433.1| exonuclease [Pseudomonas mendocina DLHK]
Length = 182
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ L EIIE + +V G G FQ +V+P P LTDFC+E
Sbjct: 3 HWLVIDLEATTDEGGWPLEEMEIIEIGASLV-GADGHERDHFQRFVKPQRRPCLTDFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD+ +L + ++WL Q +S +W D+D + LE E R ++
Sbjct: 62 LTHIAQADVDSAGSLPQVWAQLERWLEQHAPRLVGWS--SWGDYD-RRQLEQEWRQHQLT 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAGL +QG H L DA N ARLL +++
Sbjct: 119 SLLQGTPHLNLKQAFAKARQLPRPVGLHSALQLAGLQFQGAQHRALTDARNTARLLPLVL 178
>gi|268577615|ref|XP_002643790.1| Hypothetical protein CBG02001 [Caenorhabditis briggsae]
Length = 299
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFEATC+K+ +P EII+F SV V +II F YVRP P LTD
Sbjct: 9 FDDLLILDFEATCEKDNYDYPPEIIQF-SVAVLNTREKIIREDVSFNKYVRPVINPQLTD 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
FC ELTGI Q +D T E WL + + F+ V S D + + +
Sbjct: 68 FCAELTGINQDTIDKADTFPEVYDQFTAWLNKHNIQEKRFAFVCDSRQDMWRFAQYQFLL 127
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCN-------LKEAVELAGLIWQGRVHCGLDDAI 170
K P F QW+NL + + F + +++ + + G H +D+
Sbjct: 128 NKQPLPTIFRQWVNLGHLYEQDFRKAQQQDIWGPSFIEKMSGFYNIPFNGHNHNAMDECA 187
Query: 171 NIARLLSVIMRRGFKFSITKSLTPQANPNCLTWN 204
+A++ ++ G +I +SL + P + +N
Sbjct: 188 FLAKVTKRVLDDGNLVNINESLKCISGPRNVPFN 221
>gi|186682035|ref|YP_001865231.1| exonuclease [Nostoc punctiforme PCC 73102]
gi|186464487|gb|ACC80288.1| Exonuclease, RNase T and DNA polymerase III [Nostoc punctiforme PCC
73102]
Length = 187
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 3 YYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
YY+++D EATC ++ + H EIIE +V+++ + EI + FQ +++P P LTDFC
Sbjct: 8 YYLIVDLEATCCDKKTIPRHEMEIIEIGAVMLNRATWEIDSEFQQFIQPVRHPQLTDFCT 67
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LT IQQ VD EA+ +W+ N +W ++D + ++ +C
Sbjct: 68 KLTSIQQQDVDEAPKFIEAISRFKEWICSF----PNHIFCSWGNYDKKQFIQ-DCAFHNF 122
Query: 121 QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + ++ IN++ FS+ G R + +A+ G+ +G H G+DDA NIA + I
Sbjct: 123 AYP-FTSEHINIKEEFSEYLGVSKRFGMAQALNELGIELKGTHHRGIDDAHNIASIYRQI 181
>gi|268578591|ref|XP_002644278.1| Hypothetical protein CBG14050 [Caenorhabditis briggsae]
Length = 212
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F++ +++DFE T D E++ +P E+I+F SVV V E IA F +VRP P+L+++C
Sbjct: 8 FDHLLILDFETTSDGEKHDYPFEVIQF-SVVPLDVKLEGIA-FNKFVRPVVNPILSNYCA 65
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+ TGI+Q ++ T +WL + G ++V S D + + + R+ +
Sbjct: 66 DFTGIKQEFLNAADTFLVVYKQFLEWLQKNGFQERKLAIVCDSSQDMWRIAQYQFRLVRE 125
Query: 121 QKPAYFNQWINLRVPFSKVFGD-------VRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
P+ F QWIN++ F D + N+++ G+ G+ H L D +NIA
Sbjct: 126 TMPSMFRQWINIKRTFDDGLEDGQKNKLVGKSNIEKMSSYLGIELSGKAHDALSDCLNIA 185
Query: 174 RLLSVIMRRGFKFSITKSL 192
+ I+ G +I + L
Sbjct: 186 AITQKILEIGCPVTINEML 204
>gi|320162584|gb|EFW39483.1| three prime histone mRNA exonuclease [Capsaspora owczarzaki ATCC
30864]
Length = 897
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
F+Y+VVID+EATC++ + +P EIIEFP+VVV+ +GEI+ +++YVRP P LT F
Sbjct: 573 FDYFVVIDYEATCEENASFSTYPHEIIEFPAVVVNARTGEIVHSWRSYVRPVLNPTLTPF 632
Query: 59 CKELTGIQQHQVD 71
C +LTGI Q QVD
Sbjct: 633 CTQLTGITQSQVD 645
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 97 FSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGL 156
F+++ WD + + +CR +I +P + QW+NLR+ FSK + + +E G+
Sbjct: 795 FAILCDGPWDLRDFMTKQCRHSQIFRPWFTQQWVNLRMHFSKFYHMKLGGIDFMLESLGM 854
Query: 157 IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQ 195
+QG H GLDDA NIAR+ ++R G L Q
Sbjct: 855 QFQGNKHSGLDDATNIARVACQMLRDGCALHTNDDLIRQ 893
>gi|399009452|ref|ZP_10711886.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
gi|398112186|gb|EJM02052.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
Length = 180
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ L EIIE + +V+ G + FQ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPLTDMEIIEIGATLVN-REGRELDHFQRFVRPLRRPMLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q Q+D L E ++WL G ++T +W D+D + +L+ R +
Sbjct: 62 LTHITQAQIDGAQPLSEVWPLFERWL---GQHHTRLEGWASWGDYDRKQLLQEWQRSQLH 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +I
Sbjct: 119 SALAQLPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLI 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|152986809|ref|YP_001349107.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452879067|ref|ZP_21956213.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
gi|150961967|gb|ABR83992.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452184333|gb|EME11351.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
Length = 183
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 3 YYVVIDFEAT-CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT + L EIIE + +V+ + FQ +VRP PLLT FC++
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPLRRPLLTHFCRD 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD ++WL Q ++ +W D+D + LE E R ++
Sbjct: 63 LTHISQASVDGAAQFDAVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHRLS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+NL+ + FG+VR L A++LAG+ +QG+ H L+DA N ARLL
Sbjct: 120 SQLSEVPHVNLK----QRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLL 175
Query: 177 SVIM 180
+++
Sbjct: 176 PLVL 179
>gi|268578587|ref|XP_002644276.1| Hypothetical protein CBG14047 [Caenorhabditis briggsae]
Length = 292
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA---CFQTYVRPTFEPLLTDFCKE 61
+++DFE T + E + +P E+I+F SVV V + I F +VRP P+L+ C E
Sbjct: 6 IILDFETTSEGETHDYPFEVIQF-SVVPYDVKAKTILEGHAFNKFVRPVVNPVLSKHCTE 64
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI+Q ++ T KWL + G +F++V+ S D + + + R+ +
Sbjct: 65 FTGIKQESLNAADTFLVVYKQFLKWLQKNGFQERHFAIVSDSRQDMWRIAQYQFRLVQET 124
Query: 122 KPAYFNQWINLRVPFSKVFGD-------VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
P+ F QWIN++ F D R N+++ + G+ + GR H L D + +A
Sbjct: 125 MPSMFRQWINIKRTFDDGLEDGQKNKLVGRSNMEKMLNYLGIEFSGRAHDALSDCLTLAA 184
Query: 175 LLSVIMRRGFKFSITK 190
+ I+ G +I +
Sbjct: 185 ITQKILEMGCPVTINE 200
>gi|330503165|ref|YP_004380034.1| exonuclease [Pseudomonas mendocina NK-01]
gi|328917451|gb|AEB58282.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas mendocina
NK-01]
Length = 182
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V GV G FQ V+P P LTDFC+E
Sbjct: 3 HWLVIDLEATTDEGGWPMEEMEIIEIGASLV-GVDGHERDHFQRIVKPQRRPCLTDFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD+ + + ++WL Q +S +W D+D + LE E R +
Sbjct: 62 LTHITQSDVDSAAPMPQVWAQFERWLTQHAPRLVGWS--SWGDYDRR-QLEQEWRQHHLN 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAG+ +QG+ H L+DA N ARLL +++
Sbjct: 119 SLLSEVPHLNLKQAFAKARQLQRPIGLHSALQLAGMQFQGQQHRALEDARNTARLLPLVL 178
>gi|49081684|gb|AAT50242.1| PA1575, partial [synthetic construct]
Length = 184
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 3 YYVVIDFEAT-CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT + L EIIE + +V+ + FQ +VRP PLLT FC++
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD L ++WL Q ++ +W D+D + LE E R +
Sbjct: 63 LTHISQANVDGAAHLNTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+NL+ + FG+VR L A++LAG+ +QG+ H L+DA N ARLL
Sbjct: 120 SQLSEVPHVNLK----QRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLL 175
Query: 177 SVIM 180
+++
Sbjct: 176 PLVL 179
>gi|15596772|ref|NP_250266.1| hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|107101007|ref|ZP_01364925.1| hypothetical protein PaerPA_01002037 [Pseudomonas aeruginosa PACS2]
gi|218892469|ref|YP_002441336.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|254234675|ref|ZP_04927998.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|254239923|ref|ZP_04933245.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|386059536|ref|YP_005976058.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|392984961|ref|YP_006483548.1| exonuclease [Pseudomonas aeruginosa DK2]
gi|416861264|ref|ZP_11914566.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|418587051|ref|ZP_13151087.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|418592488|ref|ZP_13156358.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|419755563|ref|ZP_14281918.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|420140571|ref|ZP_14648324.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|421154740|ref|ZP_15614242.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|421161644|ref|ZP_15620582.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|421181335|ref|ZP_15638848.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|421516209|ref|ZP_15962895.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|424940793|ref|ZP_18356556.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|451986062|ref|ZP_21934255.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|9947538|gb|AAG04964.1|AE004586_2 hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|126166606|gb|EAZ52117.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|126193301|gb|EAZ57364.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|218772695|emb|CAW28480.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|334836920|gb|EGM15705.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|346057239|dbj|GAA17122.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|347305842|gb|AEO75956.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|375042398|gb|EHS35052.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|375048663|gb|EHS41180.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|384398260|gb|EIE44668.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|392320466|gb|AFM65846.1| putative exonuclease [Pseudomonas aeruginosa DK2]
gi|403246670|gb|EJY60373.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|404349937|gb|EJZ76274.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|404521648|gb|EKA32219.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|404539370|gb|EKA48856.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|404543967|gb|EKA53181.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|451756242|emb|CCQ86778.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|453046930|gb|EME94645.1| exonuclease [Pseudomonas aeruginosa PA21_ST175]
Length = 183
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 3 YYVVIDFEAT-CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT + L EIIE + +V+ + FQ +VRP PLLT FC++
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD L ++WL Q ++ +W D+D + LE E R +
Sbjct: 63 LTHISQANVDGAAHLNTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+NL+ + FG+VR L A++LAG+ +QG+ H L+DA N ARLL
Sbjct: 120 SQLSEVPHVNLK----QRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLL 175
Query: 177 SVIM 180
+++
Sbjct: 176 PLVL 179
>gi|268578589|ref|XP_002644277.1| C. briggsae CBR-CRN-4 protein [Caenorhabditis briggsae]
Length = 298
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F++ +++DFE T + +P EII+F SVV V + + F +VRP P L++
Sbjct: 8 FDHLLILDFETTSGGKNRDYPTEIIQF-SVVPLDVKAKTMLEGIAFNKFVRPVINPTLSE 66
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C ELTGI+Q +++ T +WL + G +F++V+ S D + + + R+
Sbjct: 67 HCAELTGIKQESLNSADTFLVVYKQFLEWLQKNGFQERHFAIVSDSRQDMWRIAQYQFRL 126
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVR-------CNLKEAVELAGLIWQGRVHCGLDDAI 170
+ P+ F QWIN++ F D + N+++ G+ G+ H L D +
Sbjct: 127 VRETMPSMFRQWINIKRTFDDGLEDGQKEKLVGTTNIEKMSNYLGIELSGKAHDALSDCL 186
Query: 171 NIARLLSVIMRRGFKFSITKSL 192
NIA + I+ G +I + L
Sbjct: 187 NIAAITHKILEIGCPVTINEML 208
>gi|116049519|ref|YP_791677.1| hypothetical protein PA14_44130 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390052|ref|ZP_06879527.1| hypothetical protein PaerPAb_17961 [Pseudomonas aeruginosa PAb1]
gi|313106587|ref|ZP_07792814.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|355644666|ref|ZP_09053861.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|386065404|ref|YP_005980708.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|416879532|ref|ZP_11920861.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|421168770|ref|ZP_15626836.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|421175341|ref|ZP_15633030.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
gi|115584740|gb|ABJ10755.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|310879316|gb|EFQ37910.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|334837330|gb|EGM16096.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|348033963|dbj|BAK89323.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|354829121|gb|EHF13208.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|404528564|gb|EKA38642.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|404532491|gb|EKA42374.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
Length = 183
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 3 YYVVIDFEAT-CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT + L EIIE + +V+ + FQ +VRP PLLT FC++
Sbjct: 3 HWLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRD 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD L ++WL Q ++ +W D+D + LE E R +
Sbjct: 63 LTHISQANVDGAAHLDTVWEAFERWLAQHRPRLAGWA--SWGDYDRR-QLEQEWRQHGLT 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+NL+ + FG+VR L A++LAG+ +QG+ H L+DA N ARLL
Sbjct: 120 SQLSEVPHVNLK----QRFGEVRQLPRPVGLNAALQLAGMSFQGQQHRALEDARNTARLL 175
Query: 177 SVIM 180
+++
Sbjct: 176 PLVL 179
>gi|326426891|gb|EGD72461.1| hypothetical protein PTSG_11592 [Salpingoeca sp. ATCC 50818]
Length = 978
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 6 VIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGI 65
V+DFEATC+++ P EIIEFP V++ EI+ Q Y RP F P+L+ FC +LTGI
Sbjct: 37 VVDFEATCEEDDANFPHEIIEFPLVIIDVHRKEIVEKQQFYCRPVFNPILSPFCTQLTGI 96
Query: 66 QQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSD--WDCQVMLESECRIKKIQKP 123
+Q VD+ L L + ++ ++ SD WD + + +CR + P
Sbjct: 97 KQESVDSAAEFPHVLDQVMAILDKYRSHDAGHKLLLASDGPWDFRNFFQWQCRASSVPAP 156
Query: 124 AYFNQWINLRVPFSKVFGDVR 144
A +QW+++R F G V+
Sbjct: 157 ALMHQWLDIRKAFRACRGGVK 177
>gi|395835560|ref|XP_003790745.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 592
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWSD 104
ELTGI+Q QVD G L L KW+ + G++ + S VTWSD
Sbjct: 2 ELTGIKQAQVDEGAPLKICLSQFCKWIHNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSD 61
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 62 WDLGVCLEYECKRKQLLKPVFLNSWIDLRAIYKLFYRRKPKGLSGALQEVGIEFSGREHS 121
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL---TPQANPNCLTWN 204
GLDD+ N A L ++R G + IT+SL + + NP L N
Sbjct: 122 GLDDSRNTALLAWKMIRDGCQMKITRSLNKVSAKKNPRILATN 164
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + ++ GP G F+ C G + R CC+YF+W T
Sbjct: 498 CKCGRRSKRLLVSNNGPNHGKVFYCCPIGKFQEKR-KCCDYFKWEET 543
>gi|398871585|ref|ZP_10626899.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
gi|398206141|gb|EJM92914.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
Length = 180
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 98/181 (54%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVDR-KGRELDHFQRFVRPVRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T V+W D+D + +L+ R++
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GQHHTRLEGWVSWGDYDRKQLLQEWQRLELA 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SVLANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|398930885|ref|ZP_10664851.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398164575|gb|EJM52708.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 180
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVD-RKGRELDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T V+W D+D + +L+ R+
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GQHHTRLEGWVSWGDYDRKQLLQEWQRLGLT 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SALANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|398911049|ref|ZP_10655333.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
gi|398184779|gb|EJM72213.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
Length = 180
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVD-RKGRELDYFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T V+W D+D + +L+ R+
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GQHHTRLEGWVSWGDYDRKQLLQEWQRLGLA 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SALANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|425900662|ref|ZP_18877253.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883470|gb|EJK99956.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 180
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVN-REGRELDHFQRFVRPLRRPMLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q Q+D L E ++WL G ++T +W D+D + +L+ R +
Sbjct: 62 LTHITQAQIDGAQPLSEVWPLFERWL---GQHHTRLEGWASWGDYDRKQLLQEWQRSQLH 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +I
Sbjct: 119 SALAQLPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLI 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|403418454|emb|CCM05154.1| predicted protein [Fibroporia radiculosa]
Length = 398
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y +++DFEATC N EIIEFP++V S + A F YVRP P LT FC
Sbjct: 196 LRYLLILDFEATCGDAVNGQ-NEIIEFPTLVYSLERDRVEATFHEYVRPVVHPTLTPFCT 254
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMG-LNNTN-------FSVVTWSDWDCQVMLE 112
ELTGI Q V G A F W G +++T F +T +WD Q ML
Sbjct: 255 ELTGITQDVV------GCADTFPTVWKRFQGFMDDTEGLSDPGAFIFLTCGNWDLQSMLP 308
Query: 113 SECRIKKIQKP--------AYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVH 163
+ + K + A FN++IN++ F K++ R ++ ++ L +GR H
Sbjct: 309 RQLILSKCESALDESDNLTAPFNRFINIKHSFRKLYRLRRQQGMQAMLKDLKLTLEGRHH 368
Query: 164 CGLDDAINIARLLSVIMRRGFK 185
G+DD NI R++ + G++
Sbjct: 369 SGIDDCKNILRIVQRMRADGWR 390
>gi|335775859|gb|AEH58712.1| 3'-5' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 218
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y +IDFEATC E P+ EIIEFP V+++ + EI FQ YVRP L+D
Sbjct: 77 YDYICIIDFEATC--EEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSD 134
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
FC LTGI Q VD T + L W+ L +S++T WD L +CR
Sbjct: 135 FCINLTGITQDLVDGADTFPQVLRKVVDWMKLKELGTKYKYSILTDGSWDMSKFLNIQCR 194
Query: 117 IKKIQKPAYFNQWINLRVPFSKVF 140
+ +++ P + +WIN+R + +
Sbjct: 195 LSRLKYPPFAKKWINIRKSYGNFY 218
>gi|440793448|gb|ELR14631.1| exonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 927
Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats.
Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 1 FEYYVVIDFEATCDKERN-------------LHPQEIIEFPSVVVSGVSGEIIACFQTYV 47
+ Y VV+D EATC++ RN LH EIIEFP VV ++I Q YV
Sbjct: 10 YRYVVVLDLEATCEEVRNPSSSGAGDGTENRLH-HEIIEFPWAVVDLKEAKVIEQRQLYV 68
Query: 48 RPTFEP--LLTDFCKELTGIQQHQV-DNGITLGE-----ALYFHDKWLLQMGLNNTNFSV 99
+P +E L+ FC +LTGI + + G L + A HD G++ V
Sbjct: 69 KPEWEENRHLSAFCTKLTGITDAVLAEQGQPLKQCIAIFAQAMHDLQQQDGGVDKDLICV 128
Query: 100 VTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCN----LKEAVELAG 155
T DWD V L E K + P + ++IN+R S + R + LK + G
Sbjct: 129 ATDGDWDLDVQLRGEAAAKGLDVPYHLQRFINVREEVSYFYKPGREHHIKGLKSLLRYLG 188
Query: 156 LIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
L QGR H G+DD +NI +++ + G F+ +++
Sbjct: 189 LPHQGRHHSGIDDVLNICQIVLRLAADGHAFTPERAV 225
>gi|389681036|ref|ZP_10172381.1| exonuclease family protein [Pseudomonas chlororaphis O6]
gi|388554572|gb|EIM17820.1| exonuclease family protein [Pseudomonas chlororaphis O6]
Length = 180
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVN-REGRELDHFQRFVRPLRRPMLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q Q+D L E ++WL Q ++ +W D+D + +L+ R +
Sbjct: 62 LTRISQAQIDGAQPLSEVWPLFERWLGQHHARLEGWA--SWGDYDRKQLLQEWQRSQLHS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +I+
Sbjct: 120 ALAQLPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLIL 178
>gi|158258625|dbj|BAF85283.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQM----------GLNNTNFS------VVTWSD 104
ELTGI+Q QVD G+ L L KW+ ++ G++ + S VTWSD
Sbjct: 2 ELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSD 61
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
WD V LE EC+ K++ KP + N WI+LR + + L A++ G+ + GR H
Sbjct: 62 WDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGREHS 121
Query: 165 GLDDAINIARLLSVIMRRGFKFSITKSL 192
GLDD+ N A L ++R G IT+SL
Sbjct: 122 GLDDSRNTALLAWKMIRDGCVMKITRSL 149
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGC--GNWTPNRGACCNYFQWATT 276
C CG +S + V+ GP G F+ C G + NR CC YF+W T
Sbjct: 504 CKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENR-KCCGYFKWEQT 549
>gi|353234855|emb|CCA66876.1| hypothetical protein PIIN_00635 [Piriformospora indica DSM 11827]
Length = 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 4 YVVIDFEATCDKERNLH-PQEIIEFPSVVV----SGVSGE-----IIACFQTYVRPTFEP 53
++V+D E TC P EIIE+P V++ S S E I+ F ++VRPTF+P
Sbjct: 57 FLVLDVEGTCVPSIGFDWPNEIIEWPVVLLRWDESSKSDECQRLTIVDEFHSFVRPTFQP 116
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN---FSVVTW---SDWDC 107
L FC ELTGI Q QV++ T E L +L++ G+ ++ W WD
Sbjct: 117 KLHPFCTELTGITQEQVNSAPTFPEVLSSCKAFLIKNGVIDSEGNPLQTYIWCTDGPWDL 176
Query: 108 QVMLESECRIKKIQKPAY-----------FNQWINLR-----VPFSKVFGDVRCN----L 147
+ + I IQ+P++ F +W R S+ G N L
Sbjct: 177 RDFFTKQAYISGIQRPSWIPYKILDVRKTFGEWYTQRYLRRFTKNSRHNGSFSINHSYKL 236
Query: 148 KEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRG 183
+ +EL L ++GR H G+DD+ NIAR+L + RG
Sbjct: 237 SKQLELLNLTFEGREHSGIDDSRNIARVLIELSARG 272
>gi|172087346|ref|XP_001913215.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
gi|42601342|gb|AAS21368.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
Length = 646
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-------------------------------EIIEFPS 29
F++ +VIDFEA+C P+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDCENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 30 VVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ 89
V+V+ + EII+ F +V P P L+DFCK+LT +++ + TL E + + W
Sbjct: 63 VLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 90 MGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRV-------PFSKVFGD 142
+ + T DWD L SE + KKI+ P W++LR +K G
Sbjct: 123 VQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLRAVSRVYLQSVNKKMGH 181
Query: 143 VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
+ L+ + + W+G+ H G+DDA N AR L+V M K +T++L
Sbjct: 182 IPV-LRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLK--VTRTL 227
>gi|398952007|ref|ZP_10674469.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM33]
gi|398155504|gb|EJM43943.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM33]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVD-RKGRELDQFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T V+W D+D + +L+ R+
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GHHHTRLEGWVSWGDYDRKQLLQEWQRLGLA 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SVLANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|426408384|ref|YP_007028483.1| exonuclease [Pseudomonas sp. UW4]
gi|426266601|gb|AFY18678.1| exonuclease [Pseudomonas sp. UW4]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTDMEIIEIGATLVD-RKGRELDQFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T +W D+D + +L+ R+ +
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GNHHTRLEGWASWGDYDRKQLLQDWQRLGLV 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SMLANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|268577619|ref|XP_002643792.1| Hypothetical protein CBG02003 [Caenorhabditis briggsae]
Length = 299
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFEATC+K+ + +P EII+F SV V +II F YV+P P LTD
Sbjct: 9 FDNLLILDFEATCEKDNHDYPSEIIQF-SVAVLNTREKIIREDVSFNKYVKPIINPKLTD 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
FC ELTGI Q +D T E WL + ++ V S D + +
Sbjct: 68 FCAELTGIDQDTIDKADTFPEVYDQFTAWLEEHNFQEKRYAFVCESRQDVWRRAHYQFLL 127
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQ----------GRVHCGLD 167
K PA F QW+NL + + D+R ++ I + G+ H +
Sbjct: 128 NKQPLPAIFRQWVNLSFHYRE---DMRLAQRQDTVHQSFIEKMSAFYDIPFVGQAHNAMS 184
Query: 168 DAINIARLLSVIMRRGFKFSITKSL 192
+ +A++ I+ G +I +SL
Sbjct: 185 ECSFLAKVTKHILDNGKLVTINESL 209
>gi|313215127|emb|CBY42833.1| unnamed protein product [Oikopleura dioica]
Length = 604
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EI EFP+V+V+ + EII+ F +V P P L+DFCK+LT +++ + TL E +
Sbjct: 14 EITEFPAVLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMID 73
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRV-------P 135
+ W + + T DWD L SE + KKI+ P W++LR
Sbjct: 74 FELWTKDVQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLRAVSRVYLQS 132
Query: 136 FSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
+K G + L+ + + W+G+ H G+DDA N AR L+V M K +T++L
Sbjct: 133 VNKKMGHIPV-LRRLFRVLKMEWEGKHHSGIDDARNTAR-LAVKMAANLK--VTRTL 185
>gi|398894018|ref|ZP_10646448.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
gi|398183150|gb|EJM70645.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
Length = 180
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPIKDMEIIEIGATLVD-RKGRELDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D LGE ++WL G ++T V+W D+D + +L+ ++
Sbjct: 62 LTHITQANIDAAQPLGEVWPAFERWL---GQHHTRLEGWVSWGDYDRKQLLQEWQQLGLA 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 119 SALANVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|376261873|ref|YP_005148593.1| exonuclease [Clostridium sp. BNL1100]
gi|373945867|gb|AEY66788.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium sp. BNL1100]
Length = 187
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 5 VVIDFEATC-DK-ERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+ +DFEATC DK E+ P EIIE +V +G + + I F +RP EP+L+D+CKE
Sbjct: 3 IFVDFEATCWDKNEKYKRPHAEIIEIGAVA-TGQNLKEIGKFSAVIRPEIEPVLSDYCKE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LTG+ Q V+NGI A+ +W++Q + + TW ++D +L+ R + +
Sbjct: 62 LTGLSQSDVENGIDFNRAIDLFYQWIIQYQTTQSPI-LYTWGNYDT-FLLKRSLRRHRTK 119
Query: 122 KPAYFN-----QWINLRVPFSK--VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ N I+L+ F K CNL +A+++ + G +H +DDA N+ +
Sbjct: 120 NKDFLNIIHKEGLIDLQEQFMKFTALPSSSCNLVKALQIIRKNYHGTIHRSVDDAANMIK 179
Query: 175 L 175
L
Sbjct: 180 L 180
>gi|71397756|ref|XP_802533.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70863734|gb|EAN81087.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 210
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EIIEFP V+V +A F +V+P P L++FC++LTGI+Q +DN + L + +
Sbjct: 2 EIIEFPVVMVDVRLQRAVAEFHHFVKPKVNPKLSEFCRQLTGIRQEDIDNALPLEDVIRR 61
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDC-QVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG 141
++W Q + + T D + M + I+ P+ F QWI+++ F+ F
Sbjct: 62 FERWHAQTVPPGSRTMLATDGPTDLKEFMYIHSVSRQGIRFPSMFYQWIDVKRFFAHFFQ 121
Query: 142 DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKF 186
+ +K ++ ++GR+H G+DDA N+A ++ +++ G F
Sbjct: 122 CQQGKIKAMLDALNCPFEGRLHSGIDDARNVATIVIRMLKLGCSF 166
>gi|170094696|ref|XP_001878569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647023|gb|EDR11268.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 284
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 39/221 (17%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSG---------EIIACFQTYVRPT 50
+E ++V+D E TCD+ + +P EIIEFP ++ + E++ F+TYV+P
Sbjct: 37 YEVFLVLDIEGTCDQGTDFNYPNEIIEFPVCLMRWKNRTDDDFCSELEVVDEFRTYVKPK 96
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTW-SD- 104
+ P L+ FC ELTGI Q QVD+ + L +K+L + GL ++ + W SD
Sbjct: 97 WRPTLSKFCTELTGITQAQVDDAPLFPDVLVDLEKFLAKHGLIDEESSEPLARFCWCSDG 156
Query: 105 -WDCQVMLESECRIKKIQKPAYFNQ---------WINLRVPFSKVFGDVRCNLK------ 148
+D + + +C I +++ P + W+ L+ ++ L
Sbjct: 157 PFDVRDFVVKQCFISQVKMPQWIQYSVVDVRKAVWLALQSAQTEQPSTHESELPTIRSLN 216
Query: 149 -----EAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGF 184
+A+EL G ++GR H G+DD+ NIAR+++ + RRG
Sbjct: 217 ISAQLQALELPG--FEGRQHSGIDDSRNIARIVAELARRGI 255
>gi|296137636|ref|YP_003644877.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
gi|295797758|gb|ADG32547.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
Length = 179
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 5 VVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+VID EATCD L EIIE +V + V G ++ FQ VRP P LT FC++L
Sbjct: 6 LVIDLEATCDDADGLPASDMEIIEIGAVWAT-VEGSVLDTFQALVRPVVRPQLTPFCRQL 64
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDW---DCQVMLESECRIKK 119
T IQQ VD G L+ L TW W D + L +C
Sbjct: 65 TNIQQADVD-----GAELFPAVAARLASFAQRHQAPGATWGSWGQFDAK-QLARDCERHG 118
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I+ P + +NL+ F+K + A+++ GL G H GLDDA NIA+LL
Sbjct: 119 IESPLAAFEHVNLKRRFAKGRKIKEVGMARALQMVGLPLDGSHHRGLDDARNIAKLL 175
>gi|393245393|gb|EJD52903.1| hypothetical protein AURDEDRAFT_133758 [Auricularia delicata
TFB-10046 SS5]
Length = 318
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVS------GVSGEIIACFQTYVRPTFEP 53
++Y+ V+D EATC + +L P EIIE+P V++ + F++YVRP + P
Sbjct: 62 YDYFCVLDVEATCVEGTDLGWPNEIIEWPVVLLGWEEHDGRTELRCVDTFRSYVRPQYRP 121
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVV------TWSDWDC 107
L+DFC LTGIQQ VD L ++L + GL N N + T + +D
Sbjct: 122 KLSDFCTRLTGIQQSDVDGAPIFRNVLKDFQQFLRKNGLVNKNGKKICRWIWCTDTPYDI 181
Query: 108 QVMLESECRIKKIQKPAYF-NQWINLRVPFSKVFGDVRC---------------NLKEAV 151
+ + +C I I P Y I++R+ V +L+
Sbjct: 182 RDFVAKQCFISAIPHPPYLMGDIIDVRMAVRDYLDRVNSRAARKGRQNRPYAVTSLRVPT 241
Query: 152 ELAGL---IWQGRVHCGLDDAINIARLLSVIMRRGFKF 186
+L L ++GR H G+DD NIAR++ ++ RG
Sbjct: 242 QLQALGLGPFEGREHSGIDDTRNIARIVVRLVERGVAL 279
>gi|414076664|ref|YP_006995982.1| exonuclease [Anabaena sp. 90]
gi|413970080|gb|AFW94169.1| exonuclease [Anabaena sp. 90]
Length = 185
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 3 YYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y+++ID EATC ++++ H EIIE +V+++ + EI FQ +++P P LT FC
Sbjct: 4 YFLIIDLEATCCNQKSIPRHQMEIIEIGAVMLNRQTWEIDDEFQQFIKPVRNPQLTAFCT 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELT I Q QVD + E + W M L N +W ++D L+ +C+ I
Sbjct: 64 ELTSISQQQVDAAQSFPEVMSKLTDW---MNLFPNNI-FCSWGNYDKSQFLQ-DCKFHHI 118
Query: 121 QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P + + N++ FS+ G + + +A+E G+ QG H G+DDA NI +
Sbjct: 119 PYP-FGAEHRNIKTEFSEYLGVSHKFGMAQALERLGMELQGTHHRGIDDARNITAI 173
>gi|443472654|ref|ZP_21062680.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas pseudoalcaligenes KF707]
gi|442903096|gb|ELS28509.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas pseudoalcaligenes KF707]
Length = 180
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ L EIIE + +V G + FQ +VRP P LT FC++
Sbjct: 3 HWLVIDLEATTEEGGWPLEEMEIIEIGASLVR-ADGHEVDHFQRFVRPLRRPCLTGFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD +L + ++WL ++ +W D+D + LE E R+ ++
Sbjct: 62 LTHISQADVDGAASLPQVWQAFERWLGHHRPRLVGWA--SWGDYDRR-QLEQEWRLHQLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ R L A++LAGL +QG+ H L+DA N ARLL +++
Sbjct: 119 SLLAATPHLNLKQRFAEARQLGRAVGLHAALQLAGLSFQGQQHRALEDARNTARLLPLVL 178
>gi|398867001|ref|ZP_10622473.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
gi|398238581|gb|EJN24307.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
Length = 180
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPITEMEIIEIGATLVDH-KGRELDFFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D +GE ++WL Q + V+W D+D + +L+ R+
Sbjct: 62 LTHITQANIDAAQPMGEVWAAFERWLGQHHPRLEGW--VSWGDYDRKQLLQDWQRLALDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +++
Sbjct: 120 ALSQVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFSGQQHRALEDARNTARLLPLVL 178
>gi|423096447|ref|ZP_17084243.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
gi|397886810|gb|EJL03293.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
Length = 180
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L E ++WL N + V+W D+D + +L+ E + +++
Sbjct: 62 LTHITQASIDSAAPLTEVWPAFERWLAPYHANLEGW--VSWGDYDRKQLLQ-EWQHQQLH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +++
Sbjct: 119 SVLVQLPHMNLKQRFAKARRLERPTGLNGALQLAGLQFNGQQHRALEDARNTARLLPLVL 178
>gi|427716974|ref|YP_007064968.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
gi|427349410|gb|AFY32134.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
Length = 183
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 3 YYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y++++D EATC + ++ H EIIE +V+++ + EI + FQT+++P P LT+FC
Sbjct: 4 YFLIVDLEATCSDDGSIPRHEMEIIEIGAVMLNRENWEIDSEFQTFIKPIRHPKLTNFCT 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELT I QH V+N +A+ +W+ N+ +W ++D ++ +C+ I
Sbjct: 64 ELTTICQHDVENAPEFAKAIKNFQEWMYSF----PNYIFCSWGNYDKTQFIQ-DCKFHNI 118
Query: 121 QKPAYFNQWINLRVPFSK-VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + ++ N++ FS+ + + +A+ + +G H G+DDA NIA + +
Sbjct: 119 SYP-FNSEHRNIKKEFSEYIVTSKSFGMAQALNHLEIELKGTHHRGIDDARNIASIYRYM 177
Query: 180 MRRGF 184
+ +
Sbjct: 178 QTKKY 182
>gi|449547645|gb|EMD38613.1| hypothetical protein CERSUDRAFT_105200 [Ceriporiopsis subvermispora
B]
Length = 296
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 42/236 (17%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVV---------SGVSGEIIACFQTYVRP 49
++ ++V+D EATC R +P EIIE+P ++ S E++ F+++VRP
Sbjct: 43 YDAFLVLDVEATCIEGSPRGEYPNEIIEWPVCLLRWRDKNDNGEAKSLEVVDEFRSFVRP 102
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTW 102
T+ P L+DFCK LTGI Q QVD+ T + + ++++ GL + T F
Sbjct: 103 TWRPELSDFCKNLTGITQQQVDDTPTFAKVMESFRDFMIRHGLIDVETGKRLTRFCWCCD 162
Query: 103 SDWDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSKVFGDV--------RCNLKEAVEL 153
+D + + +C + K+Q P + +++RV S + N+ A L
Sbjct: 163 GPYDIRDFVVKQCFMSKMQMPTWVQGDMMDVRVLVSDWHASTMQRRPRRNKKNISRAFPL 222
Query: 154 AGLI---------------WQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
+ ++GR H G+DD NI R++ + RRG K + P
Sbjct: 223 PKRMPLTISRQLQVLGLPPFEGRPHSGIDDTRNITRIVIEVGRRGMKLQPNTPINP 278
>gi|407365338|ref|ZP_11111870.1| exonuclease [Pseudomonas mandelii JR-1]
Length = 182
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 12/183 (6%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V G + CFQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGATLVDR-KGREVDCFQCFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI---K 118
LT I Q VD TL E ++WL++ ++ +W D+D + +L+ R+
Sbjct: 62 LTHITQANVDAAQTLSEVWPSFEQWLVRHQSELEGWA--SWGDYDRKQLLQEWQRLHLCS 119
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
++K + +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL
Sbjct: 120 VLEKVPH----MNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLLP 175
Query: 178 VIM 180
++
Sbjct: 176 QVL 178
>gi|124007771|ref|ZP_01692473.1| 3'-5' exonuclease eri-1 [Microscilla marina ATCC 23134]
gi|123986717|gb|EAY26498.1| 3'-5' exonuclease eri-1 [Microscilla marina ATCC 23134]
Length = 185
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
YV++D EATC + R E IE +V + G G+ + F T+V+P P+L++FC +LT
Sbjct: 3 YVIVDLEATCWETRENRANETIEIGAVCI-GNEGKWVDEFDTFVKPVTHPVLSEFCTQLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q VD+ EAL +W+ N + + +W +D +V +++C + +
Sbjct: 62 SITQEMVDDAPLFPEALDDFQQWINNCA-NGDQYVLCSWGYYD-RVQFKNDCLLHNLP-- 117
Query: 124 AYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
QW+ + + D++ +K+A++ GL G H G+DDA NIA + +
Sbjct: 118 ---TQWLASHISLKHQYADIKNMRRPIGMKKALQKEGLFLSGTHHRGIDDAKNIADIFLI 174
>gi|392595926|gb|EIW85249.1| hypothetical protein CONPUDRAFT_141905 [Coniophora puteana
RWD-64-598 SS2]
Length = 328
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 36/231 (15%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVV-------SGVSGE--IIACFQTYVRPT 50
++ ++V+D EATC + N P EIIE+P V+ SG + E ++ F+++V+PT
Sbjct: 80 YDVFLVLDVEATCKQGSNFEWPNEIIEWPVCVMKWKDKSPSGKARELSVVDEFRSFVQPT 139
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTW-SD- 104
+ P L+ FC +LTGI Q Q+ + T L K+L + GL N + W SD
Sbjct: 140 WRPQLSQFCTDLTGITQDQIKDAPTFPRVLKHFSKFLAEHGLIDPKNGRPVARFCWCSDG 199
Query: 105 -WDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSKVF----GDVR-------------C 145
+D + + +C I KI P + +++R S V G +
Sbjct: 200 PFDIRDFVVKQCFISKIPMPIWLKGDVMDVRRVVSMVAQPHEGSYKRNTRHSANVNYFPF 259
Query: 146 NLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQ 195
N+ + + + GL +QGR+H G+DD+ N+AR+++ + RR + + P+
Sbjct: 260 NISQQLRVLGLPAFQGRLHSGIDDSRNLARIIAELARRDIRLEPNTHINPR 310
>gi|440682325|ref|YP_007157120.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
gi|428679444|gb|AFZ58210.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
Length = 184
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 3 YYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y++++D EATC +R + H EIIE +V+++ + EI + FQ +++P P LT FC
Sbjct: 5 YFLIVDLEATCCNQRTIPRHEMEIIEIGAVMLNRKTWEIDSEFQQFIQPVRHPQLTAFCT 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELT I Q QV++ E + +W+ N +W ++D L+ +C+ I
Sbjct: 65 ELTSITQQQVESAPLFTEVIPQFKEWIDSF----PNNIFCSWGNYDKTQFLQ-DCKFHNI 119
Query: 121 QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P + ++ N++ FS+ G + + +A++ G+ QG H G+DDA NIA +
Sbjct: 120 SYP-FGSEHRNIKNEFSEYLGVSHKFGMAQALKHLGMELQGTHHRGIDDARNIAAI 174
>gi|424924148|ref|ZP_18347509.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
gi|404305308|gb|EJZ59270.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
Length = 180
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-AGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D L E ++WL G + T +W D+D + +L+ R+ ++
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWL---GQHQTRLEGWASWGDYDRKQLLQEWQRL-QL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
Q +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL ++
Sbjct: 118 DSVLSRVQHMNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|402699837|ref|ZP_10847816.1| exonuclease [Pseudomonas fragi A22]
Length = 180
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + VV+ +G + FQ ++RP PLLT FC+
Sbjct: 3 HWLVIDLEATTDDGGWPIEEMEVIEIGASVVT-RAGREVDHFQRFIRPQRRPLLTPFCRH 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D G L + ++WL Q ++ +W D+D + LE E + KK+
Sbjct: 62 LTRITQANIDAGAPLPQVWEQFERWLGQHLPKLEGWA--SWGDYDRK-QLEQEWQQKKLD 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALARLPHMNLKQQFAQARQLKSAPGLNSALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
Query: 181 R 181
+
Sbjct: 179 K 179
>gi|149922094|ref|ZP_01910534.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
gi|149817031|gb|EDM76513.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
Length = 213
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 4 YVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
Y+VID EATCD + EIIE +V+V G + FQ +VRP LT FC++
Sbjct: 6 YLVIDLEATCDDAGAVPRREMEIIEIGAVLVDGQTLCPKREFQRFVRPLRHRTLTPFCRQ 65
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +VD T E + ++ G F +W +D + E + R +
Sbjct: 66 LTSITQAEVDGAATFPEVIAELRAFMYDDG-GRPRF--CSWGAYD-RGQFEQDARFHGVA 121
Query: 122 KPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F +NL+ FS+V G R + A+ GL +G H G+DDA NIA++L I+
Sbjct: 122 LP--FTDHLNLKAGFSRVLGTRKRYGMAGALRRLGLPLEGTHHRGIDDARNIAKILPFIV 179
>gi|119486052|ref|ZP_01620114.1| Exonuclease [Lyngbya sp. PCC 8106]
gi|119456827|gb|EAW37955.1| Exonuclease [Lyngbya sp. PCC 8106]
Length = 191
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y ++ID EATC D+ L + EIIE +V+V + FQT+++P P+LT F
Sbjct: 6 YNYCLIIDLEATCCDQHTILRSEMEIIEIGAVMVETKKLTSVNEFQTFIKPIRHPILTKF 65
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C++LT I Q QV+ EA+ WL Q ++++ +W D+D + + + +
Sbjct: 66 CQQLTSITQAQVEQAPHYPEAIKNLKNWLSQ--YSDSHLIWGSWGDYD-RRQFDQDSQFH 122
Query: 119 KIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + INL+ FS G R + +A++LA + +G H G+DD NIA+L+
Sbjct: 123 HVSFPIGYPH-INLKKMFSTSQGLKGRYGMADALKLANIPLEGTHHRGIDDTRNIAKLMP 181
Query: 178 VIM 180
I+
Sbjct: 182 YIL 184
>gi|359463339|ref|ZP_09251902.1| exonuclease [Acaryochloris sp. CCMEE 5410]
Length = 183
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 2 EYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+YY+++D EATC + ++ E+IE +V+++ + +I + +QT+++P P+LT+FC
Sbjct: 6 KYYLIVDLEATCADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEFC 65
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K LT I Q ++ AL W G ++ +W D+D ++ +C++
Sbjct: 66 KSLTSISQQDIEEAPLFPVALKDFQSWFYPCG----SYRFCSWGDYDRHQFVQ-DCQLHG 120
Query: 120 IQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P + +NL+ FS ++ + + A+ GL +G H G+DDA NIAR++
Sbjct: 121 VGYP-FPGDHLNLKQAFSIEINSKKKFGMAGALAKLGLELEGVHHRGIDDARNIARIV 177
>gi|158337902|ref|YP_001519078.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158308143|gb|ABW29760.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 183
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 2 EYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+YY+++D EATC + ++ E+IE +V+++ + +I + +QT+++P P+LT+FC
Sbjct: 6 KYYLIVDLEATCADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEFC 65
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K LT I Q ++ AL W G ++ +W D+D ++ +C++
Sbjct: 66 KSLTSISQQDIEKAPLFPAALKDFQSWFYPCG----SYLFCSWGDYDRHQFVQ-DCQMHG 120
Query: 120 IQKPAYFNQWINLRVPF-SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P + +NL+ F S++ + + A+ GL +G H G+DDA NIAR++
Sbjct: 121 VGYP-FPGDHLNLKRAFSSEINSKKKFGMAGALTELGLELEGVHHRGIDDARNIARIV 177
>gi|395333281|gb|EJF65658.1| hypothetical protein DICSQDRAFT_49122 [Dichomitus squalens LYAD-421
SS1]
Length = 258
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 43/234 (18%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV----SGVSG-----EIIACFQTYVRPT 50
++ ++V+D EATC + + +P EIIE+P ++ + V G EI+A F+++VRPT
Sbjct: 9 YDAFLVLDVEATCVEGSDFAYPNEIIEWPVCLLRWKDANVKGKTRELEIVAEFRSFVRPT 68
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLL------QMGLNNTNFSVVTWSD 104
+ P L++FC+ LTGI Q QVD+ T E L K+L + G F +
Sbjct: 69 WRPQLSEFCQALTGITQEQVDSASTFPEVLQDFRKFLEEHELLDEAGHRLARFCFCSDGP 128
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVE----------- 152
+D + + +C I KI PA+ + + + +V G+ N AVE
Sbjct: 129 YDIRDFVVKQCFISKIPVPAWLSGDV---MDVRRVVGEWHDANTAAAVERRQVGAFPLPR 185
Query: 153 ------------LAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
L + GR H G+DD NI RL+ + RRG++ ++ P
Sbjct: 186 RMTFPIPRQLHALGLEPFVGRQHSGIDDTRNICRLVIELARRGWRLEPNTAINP 239
>gi|104780960|ref|YP_607458.1| exonuclease [Pseudomonas entomophila L48]
gi|95109947|emb|CAK14652.1| putative exonuclease [Pseudomonas entomophila L48]
Length = 183
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V+ G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVTR-EGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VDN E ++WL+ + V+W D+D + +L+ E ++ +
Sbjct: 62 LTHISQADVDNATPFSEVWGQFERWLVNHQAQLQAW--VSWGDYDRKQLLQ-EWQVHHVD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
INL+ F+K R L A++LAGL + G+ H L+DA N ARLL + +
Sbjct: 119 SLLLKLPHINLKQRFAKARHLQRPAGLNSALQLAGLQFSGQQHRALEDARNTARLLPLSL 178
>gi|390456686|ref|ZP_10242214.1| exonuclease domain-containing protein 1 [Paenibacillus peoriae KCTC
3763]
Length = 177
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y++ D EATC + EIIE +V V+ + EII+ FQ +++P P L+DFCK LT
Sbjct: 3 YIIFDLEATCWENDRTRQNEIIEIGAVKVNA-NLEIISEFQAFIKPKLNPQLSDFCKSLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q ++D +Y +W + + + +W +D + L+ +C + KI +
Sbjct: 62 SISQQEIDMATYFPLVIYKFQEW-----IGKEPYYLCSWGFYD-KSQLKKDCELHKI-RT 114
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ I+++ K+ G+ R ++ A+++ L +G H G+DDA NI+++ I
Sbjct: 115 EWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISKIFVKI 171
>gi|398989514|ref|ZP_10692753.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
gi|399011217|ref|ZP_10713550.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398118555|gb|EJM08286.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398147409|gb|EJM36118.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
Length = 180
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-AGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L E ++WL Q ++ +W D+D + +L+ R+ +I
Sbjct: 62 LTHITQANIDTAQPLTEVWPAFERWLAQHQTRLEGWA--SWGDYDRKQLLQEWQRL-QID 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +++
Sbjct: 119 SGLSKVPHMNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLPLVL 178
>gi|229591814|ref|YP_002873933.1| hypothetical protein PFLU4398 [Pseudomonas fluorescens SBW25]
gi|229363680|emb|CAY51043.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 180
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D + LE E + +
Sbjct: 62 LTHITQANMDGAAPITEVWPLFERWLGQHHARLEGWA--SWGDYD-RAQLELEWQRHGLA 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALAHTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|366165230|ref|ZP_09464985.1| 3-5 exonuclease eri-1 [Acetivibrio cellulolyticus CD2]
Length = 182
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y++ D EATC + EIIE +V ++ E++ F +++P P+L+DFC LT
Sbjct: 3 YIIFDLEATCWENDKSKTSEIIEIGAVKLND-RLEVVDTFSKFIKPAIYPVLSDFCIRLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I+Q VD + + W+ ++T ++ +W +D + + EC +K
Sbjct: 62 SIEQKDVDTADIFKNVMVEFENWITS---SDTEVALCSWGFYD-KKQIYKECEVKNYSGR 117
Query: 124 AY--FNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMR 181
+ ++ I+++ F+++ G C + A++L GL +G H G+DDA NI ++ +
Sbjct: 118 IHSLLDKHISIKHQFAEIKGISPCGMSRALDLLGLPLEGTHHRGIDDAKNITKIFVAVFD 177
Query: 182 R 182
+
Sbjct: 178 K 178
>gi|312962237|ref|ZP_07776729.1| exonuclease [Pseudomonas fluorescens WH6]
gi|311283574|gb|EFQ62163.1| exonuclease [Pseudomonas fluorescens WH6]
Length = 180
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVNR-QGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D +V LE E + +
Sbjct: 62 LTHITQANIDAAAPVTEVWPLFERWLGQHQARLEGWA--SWGDYD-RVQLELEWQRHGLA 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALADTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|77460172|ref|YP_349679.1| exonuclease [Pseudomonas fluorescens Pf0-1]
gi|77384175|gb|ABA75688.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 180
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D L E ++WL G + T +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWL---GQHQTRLEGWASWGDYDRKQLLQEWQRLQLD 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL ++
Sbjct: 119 SALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|409427189|ref|ZP_11261714.1| exonuclease [Pseudomonas sp. HYS]
Length = 183
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTDMEIIEIGAALVD-RKGREVGHFQRFVRPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD T + ++WL + + V+W D+D + +L+ E + ++
Sbjct: 62 LTHISQANVDTAATFAQVWAQFERWLEHHAGHLEGW--VSWGDYDRKQLLQ-EWQQYQVH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
INL+ F+K R L A++LAGL + GR H L+DA N ARLL + +
Sbjct: 119 SLLAELPHINLKQRFAKARQLQRPLGLNGALQLAGLQFSGRQHRALEDARNTARLLPLSL 178
>gi|389749260|gb|EIM90437.1| hypothetical protein STEHIDRAFT_93411 [Stereum hirsutum FP-91666
SS1]
Length = 510
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 38/229 (16%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVV------SGVSG--EIIACFQTYVRPTF 51
++ ++V+D EATC + + H P EIIE+P ++ +G++ +++ F+++V+PT+
Sbjct: 89 YDAFLVLDVEATCMQGTDFHWPNEIIEWPVCLLMWKDKQNGMASRLDVVDEFRSFVKPTW 148
Query: 52 EPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSD 104
PLL+ FC +LTGI Q QVD+ + + + +L++ GL + F +
Sbjct: 149 RPLLSAFCTQLTGITQAQVDSAPHFPQVVNQFNAFLIKNGLIHPVTGERLVRFCWCSDGP 208
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGD------------------VRCN 146
+D + + +C I KI P + I + K+ G+ + N
Sbjct: 209 FDVRDFVVKQCFISKIAMPRWLAGDI---MDVRKLVGEWHAQSAGSSSRKSLFPRRISMN 265
Query: 147 LKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
++ + GL +QGR H G+DD NIAR+++ + RRG ++ P
Sbjct: 266 IESQLRALGLGNFQGRQHSGIDDTRNIARIVTELARRGITLIPNTNIHP 314
>gi|408480703|ref|ZP_11186922.1| hypothetical protein PsR81_09077 [Pseudomonas sp. R81]
Length = 180
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D + LE E + +
Sbjct: 62 LTHITQANIDGAAPMTEVWPLFERWLGQHQPRLEGWA--SWGDYDRK-QLELEWQRHGLS 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAGL + G+ H L+DA N ARLL +I+
Sbjct: 119 SALATTPHLNLKQRFAKARRLDKPLGLNGALQLAGLQFHGQQHRALEDARNTARLLPLIL 178
>gi|395651059|ref|ZP_10438909.1| exonuclease family protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 180
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVNR-EGRELDHFQRFVRPLRRPLLTPFCRK 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ + E ++WL Q ++ +W D+D LE E + +
Sbjct: 62 LTHITQANMDSAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYDRH-QLELEWQRHALA 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ +QG+ H L+DA N ARLL +I+
Sbjct: 119 SALAHTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFQGQQHRALEDARNTARLLPLIL 178
>gi|404400243|ref|ZP_10991827.1| exonuclease [Pseudomonas fuscovaginae UPB0736]
Length = 178
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D L EIIE + +V+ G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPLAEMEIIEIGATLVN-REGRELDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L E ++WL Q ++ +W D+D + + E +K+Q
Sbjct: 62 LTHISQANIDTAAPLIEVWGAFERWLGQHQARLEGWA--SWGDYDRRQL---EQDWQKLQ 116
Query: 122 KPAYFNQ--WINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ +Q NL+ F+K + L A++LAGL + G+ H L+DA N ARLL +
Sbjct: 117 LTSLLSQVPHANLKQRFAKARKLQKPLGLNGALQLAGLQFSGQQHRALEDARNTARLLPL 176
Query: 179 IM 180
I+
Sbjct: 177 IL 178
>gi|428184491|gb|EKX53346.1| hypothetical protein GUITHDRAFT_101048 [Guillardia theta CCMP2712]
Length = 638
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 43/191 (22%)
Query: 3 YYVVIDFEATCDKERN------------LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT 50
+Y IDFEATCD R P EIIEFP V+V SG++ + P
Sbjct: 255 HYAFIDFEATCDDRRGEVGEKEAEAMPGFSPSEIIEFPVVLVESASGKVDSA------PE 308
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVM 110
F+ +L + WL ++GL + T DWD + M
Sbjct: 309 FKEVLANMLD-------------------------WLAELGLPEGSVMFATDGDWDLRSM 343
Query: 111 LESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
L +C + ++ +P +W+++R FS+ L + G+ + G+ H G+ DA
Sbjct: 344 LPRQCELAEVPQPVALQRWVDIRRVFSETLKTGNKGLMSMCQALGINFVGQAHSGICDAR 403
Query: 171 NIARLLSVIMR 181
NIAR+ V+M+
Sbjct: 404 NIARVGLVLMQ 414
>gi|409082606|gb|EKM82964.1| hypothetical protein AGABI1DRAFT_82658 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 416
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 38/231 (16%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVS----GVSG--EIIACFQTYVRPTFEP 53
++ ++V+D EATC + + +P EIIEFP ++ G + +I+ F++ VRP++ P
Sbjct: 27 YDAFLVLDVEATCLQGTDFNYPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPSWRP 86
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSDWD 106
L+ FC ELTGI Q QVD + L +L++ GL + F + +D
Sbjct: 87 TLSAFCTELTGITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCWCSDGPFD 146
Query: 107 CQVMLESECRIKKIQKPAYFN-----------QWINLR---------VPFSKVFGDVRCN 146
+ + +C I +I P + QW++ + P ++ F VR +
Sbjct: 147 IRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQAR-FPPVRRS 205
Query: 147 LKEAVELAGL---IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
L + +L L +QGR H G+DDA NIAR+++ + +RG + P
Sbjct: 206 LNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVALRPNTQIKP 256
>gi|388492040|gb|AFK34086.1| unknown [Lotus japonicus]
Length = 99
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Query: 180 MRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTPPH--------TSLIHEFEDCRY 231
M +GFKFSIT S+ Q + L W + P+ M PH + I ++ C
Sbjct: 1 MHKGFKFSITNSIMWQTSDRSLMWKQ----SPEQMSVFPHYPYKAKDMNTPIVQYHPC-- 54
Query: 232 CYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCNYFQWATT 276
C+CG KS + +I++PGPK G+ FFGCGNWT RGA C+YF+W +
Sbjct: 55 CFCGVKSSRGMIRKPGPKHGNLFFGCGNWTATRGARCHYFEWISA 99
>gi|325302616|tpg|DAA34168.1| TPA_inf: hypothetical secreted protein 1605 [Amblyomma variegatum]
Length = 151
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+Y++V+DFEATC +++ + PQEIIEFP + V+G + E A F TYV P P LT FC
Sbjct: 65 FDYFLVLDFEATCSQQKGVPSPQEIIEFPVLKVNGSTFETEATFHTYVEPQAHPELTAFC 124
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKW 86
ELTGI Q VD L + L D W
Sbjct: 125 TELTGIIQDMVDGQPHLSQVLSDFDSW 151
>gi|398855281|ref|ZP_10611778.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
gi|398232129|gb|EJN18105.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
Length = 180
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L E ++WL Q ++ +W D+D + +L+ R+ I
Sbjct: 62 LTHITQANIDSAQPLTEVWPAFERWLAQHQPRLEGWA--SWGDYDRKQLLQEWQRL-NID 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +++
Sbjct: 119 SGLSKVPHMNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLVL 178
>gi|398880744|ref|ZP_10635767.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398884650|ref|ZP_10639578.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
gi|398191514|gb|EJM78703.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398193862|gb|EJM80954.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
Length = 180
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-QGREQDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L E ++WL Q ++ +W D+D + +L+ R++
Sbjct: 62 LTRITQANIDSAQALTEVWPVFERWLGQHHSRLEGWA--SWGDYDRRQLLQEWERLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ + +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 120 QLSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLPLIL 178
>gi|398928566|ref|ZP_10663545.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398168164|gb|EJM56186.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 205
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 3 YYVVIDFEATCDK-ERNLHPQ---------EIIEFPSVVVSGVSGEIIACFQTYVRPTFE 52
Y +D EATCD+ + + P+ E IE VV+ S EI+ FQ +VRP
Sbjct: 22 YLYCVDLEATCDEVDESESPRPLAVVPTQMETIEIGLVVIDLESLEIVDEFQRFVRPQIN 81
Query: 53 PLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLE 112
P LTDFC +LT IQQ VD T E L + N + +W D+D + LE
Sbjct: 82 PTLTDFCIKLTSIQQPDVDGAQTYQEV----GDELRTFAASYPNAAWASWGDYDAR-QLE 136
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
N R + ++ + +LK+ VE GL+WQG H G+DDA N+
Sbjct: 137 RGAGFAACPSLLEGLPHFNARKWHAGLYDNRPKSLKQTVESLGLVWQGTYHRGIDDARNV 196
Query: 173 ARLLSVIM 180
A ++ I+
Sbjct: 197 ASIVKEIL 204
>gi|395494831|ref|ZP_10426410.1| hypothetical protein PPAM2_02110 [Pseudomonas sp. PAMC 25886]
Length = 180
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + EIIE V + G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEI-GVSLVNRQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L + ++WL Q ++ +W D+D Q LE E + +
Sbjct: 62 LTHITQANIDAAAPLNDVWPLFERWLGQHQARLEGWA--SWGDYDRQ-QLELEWQRHGLS 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SVLSQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|426200471|gb|EKV50395.1| hypothetical protein AGABI2DRAFT_190719 [Agaricus bisporus var.
bisporus H97]
Length = 416
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 38/231 (16%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVS----GVSG--EIIACFQTYVRPTFEP 53
++ ++V+D EATC + + +P EIIEFP ++ G + +I+ F++ VRP++ P
Sbjct: 27 YDAFLVLDVEATCLQGTDFNYPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPSWRP 86
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSDWD 106
L+ FC ELTGI Q QVD + L +L++ GL + F + +D
Sbjct: 87 TLSAFCTELTGITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCWCSDGPFD 146
Query: 107 CQVMLESECRIKKIQKPAYFN-----------QWINLR---------VPFSKVFGDVRCN 146
+ + +C I +I P + QW++ + P ++ F +R +
Sbjct: 147 IRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQAR-FPPIRRS 205
Query: 147 LKEAVELAGL---IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
L + +L L +QGR H G+DDA NIAR+++ + +RG + P
Sbjct: 206 LNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVALRPNTQIKP 256
>gi|398935809|ref|ZP_10666681.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
gi|398169104|gb|EJM57098.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
Length = 180
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRPT PLLT FC++
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-KGRELDSFQCFVRPTRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D L E + WL G +++ V+W D+D + +++ R++
Sbjct: 62 LTHITQANIDAAQPLNEVWASFEHWL---GQHHSRLEGWVSWGDYDRKQLVQEWERLQLD 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL ++
Sbjct: 119 SALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|388467601|ref|ZP_10141811.1| exonuclease family protein [Pseudomonas synxantha BG33R]
gi|388011181|gb|EIK72368.1| exonuclease family protein [Pseudomonas synxantha BG33R]
Length = 180
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRK 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D +V LE E + +
Sbjct: 62 LTHITQANIDAATPITEVWPLFERWLGQHQARLEGWA--SWGDYD-RVQLELEWQRHGLS 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALGQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
>gi|410093971|ref|ZP_11290433.1| exonuclease [Pseudomonas viridiflava UASWS0038]
gi|409758612|gb|EKN43891.1| exonuclease [Pseudomonas viridiflava UASWS0038]
Length = 207
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 1 FEYYVVIDFEATCDKE-------RNL----HPQEIIEFPSVVVSGVSGEIIACFQTYVRP 49
++Y + ID EATCD++ R+L E IE VV S +++ FQ+++RP
Sbjct: 20 YQYLLCIDLEATCDEDAKPGEPPRHLIVPREDMETIEIGLAVVDLSSLQLVDQFQSFIRP 79
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQV 109
+ P+LTDFC+ LT I+Q VD + D +L N + +W D+D +
Sbjct: 80 SLHPVLTDFCRRLTTIKQSDVDGALGYVNVAGMLDAFLEAY----PNSAWCSWGDYDYKQ 135
Query: 110 MLESECRIKKIQKPAYFNQW-INLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ + R+ P NL+ KVF L+ AVE+ GL W+G H G+DD
Sbjct: 136 LQKDALRLNC--APMLDGMLHTNLKKWHWKVFNCKALGLQPAVEMLGLEWEGTYHRGIDD 193
Query: 169 AINIARLLSVIMRR 182
A N++ + ++ R
Sbjct: 194 ARNLSNVAIHMLGR 207
>gi|398977520|ref|ZP_10687191.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
gi|398137953|gb|EJM26988.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
Length = 180
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-AGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D L E ++WL G + T +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDAAQPLSEVWPAFERWL---GQHQTRLEGWASWGDYDRKQLLQEWQRLQLD 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL ++
Sbjct: 119 SVLSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|378949672|ref|YP_005207160.1| exonuclease [Pseudomonas fluorescens F113]
gi|359759686|gb|AEV61765.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas fluorescens F113]
Length = 180
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L E ++WL+ + S V+W D+D + +L+ E + +++
Sbjct: 62 LTHITQANIDGAAPLTEVWPAFERWLVPY--QSKLESWVSWGDYDRKQLLQ-EWQHQQLH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +++
Sbjct: 119 SVLGQVPHMNLKQRFAKARRLERPLGLNGALQLAGLQFCGQQHRALEDARNTARLLPLVL 178
>gi|330808406|ref|YP_004352868.1| exonuclease [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423696196|ref|ZP_17670686.1| exonuclease family protein [Pseudomonas fluorescens Q8r1-96]
gi|327376514|gb|AEA67864.1| Conserved hypothetical protein; putative exonuclease [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004222|gb|EIK65549.1| exonuclease family protein [Pseudomonas fluorescens Q8r1-96]
Length = 180
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVNR-DGREVDHFQRFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L E ++WL + S V+W D+D + +L+ E + +++
Sbjct: 62 LTHITQANIDSAAPLTEVWPAFERWL--TPYQSKLESWVSWGDYDRKQLLQ-EWQHQQLH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +++
Sbjct: 119 SVLGQVPHMNLKQRFAKARRLERPLGLNGALQLAGLQFCGQQHRALEDARNTARLLPLVL 178
>gi|398837808|ref|ZP_10595096.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
gi|398117960|gb|EJM07702.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
Length = 182
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 6/179 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G+ + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RKGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L + ++WL Q + ++ +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDASQPLTDVWPLFERWLGQHHASLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 120 ALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLPLV 177
>gi|447917575|ref|YP_007398143.1| hypothetical protein H045_12910 [Pseudomonas poae RE*1-1-14]
gi|445201438|gb|AGE26647.1| hypothetical protein H045_12910 [Pseudomonas poae RE*1-1-14]
Length = 180
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + EIIE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D + LE E + +
Sbjct: 62 LTHITQANIDAAAPITEVWPLFERWLGQHQSRLEGWA--SWGDYD-RAQLELEWQRHGLT 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALANTLHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|220929605|ref|YP_002506514.1| exonuclease RNase T and DNA polymerase III [Clostridium
cellulolyticum H10]
gi|219999933|gb|ACL76534.1| Exonuclease RNase T and DNA polymerase III [Clostridium
cellulolyticum H10]
Length = 186
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATC-DK-ERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+ +DFEATC DK E+ P EIIE V +G + I F V+PT EPLL+D+CKE
Sbjct: 3 IFVDFEATCWDKNEKYKQPHAEIIEI-GAVATGKDLKEIGKFSAVVKPTIEPLLSDYCKE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR----- 116
LTG+ Q V+NGI A+ +W++Q +T + TW ++D ++ + R
Sbjct: 62 LTGLSQTDVENGIEFNRAIDLFYQWIIQYQDTDTPI-LYTWGNYDGFLLKRNLRRHRNKN 120
Query: 117 ---IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+K IQK N + F+K+ C+L +A+++ G ++G H ++DA N+
Sbjct: 121 KDFLKIIQKGGVANLQEKF-LEFTKLPCS-SCSLTKALQIIGEDYRGIKHRSINDAANMI 178
Query: 174 RL 175
+L
Sbjct: 179 KL 180
>gi|395793817|ref|ZP_10473164.1| hypothetical protein A462_01328 [Pseudomonas sp. Ag1]
gi|421144025|ref|ZP_15603949.1| exonuclease [Pseudomonas fluorescens BBc6R8]
gi|395342017|gb|EJF73811.1| hypothetical protein A462_01328 [Pseudomonas sp. Ag1]
gi|404504811|gb|EKA18857.1| exonuclease [Pseudomonas fluorescens BBc6R8]
Length = 180
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + EIIE V + G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEIIEI-GVSLVNRQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L E ++WL Q ++ +W D+D Q LE E + +
Sbjct: 62 LTHITQANIDAAAPLIEVWPLFERWLGQHQARLEGWA--SWGDYDRQ-QLELEWQRHGLS 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SVLGQTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|398861884|ref|ZP_10617498.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
gi|398231498|gb|EJN17485.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
Length = 182
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G+ + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RKGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L + ++WL Q ++ +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDASQPLTDVWPLFERWLGQHHARLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 120 ALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLPLV 177
>gi|398902099|ref|ZP_10650787.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
gi|398178946|gb|EJM66575.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
Length = 182
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 6/179 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G+ + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RKGQELDHFQCFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L + ++WL Q + ++ +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDASQPLTDIWPLFERWLGQHHASLEGWA--SWGDYDRKQLLQDWQRLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL ++
Sbjct: 120 ALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLPLV 177
>gi|423692738|ref|ZP_17667258.1| exonuclease family protein [Pseudomonas fluorescens SS101]
gi|387998390|gb|EIK59719.1| exonuclease family protein [Pseudomonas fluorescens SS101]
Length = 180
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRK 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D +V LE E + +
Sbjct: 62 LTHITQANIDMAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYD-RVQLELEWQRHGLA 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALGDTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|440740442|ref|ZP_20919926.1| hypothetical protein A986_19075 [Pseudomonas fluorescens BRIP34879]
gi|440376517|gb|ELQ13184.1| hypothetical protein A986_19075 [Pseudomonas fluorescens BRIP34879]
Length = 180
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D+ + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDEGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D + LE E + +
Sbjct: 62 LTHITQANIDAAAPITEVWPLFERWLGQHQSRLEGWA--SWGDYD-RAQLELEWQRHGLT 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALANTLHVNLKQRFAKARRLDKPLGLNGALQLAGMQFHGQQHRALEDARNTARLLPLIL 178
>gi|387894847|ref|YP_006325144.1| exonuclease family protein [Pseudomonas fluorescens A506]
gi|387159996|gb|AFJ55195.1| exonuclease family protein [Pseudomonas fluorescens A506]
Length = 180
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++++ID EAT D + E+IE + +V+ G + FQ +VRP PLLT FC++
Sbjct: 3 HWLIIDLEATTDDGGWPVTEMEVIEIGASLVN-RQGRELDHFQRFVRPLRRPLLTPFCRK 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D + E ++WL Q ++ +W D+D +V LE E + +
Sbjct: 62 LTHITQANIDMAAPITEVWPLFERWLGQHQPRLEGWA--SWGDYD-RVQLELEWQRHGLS 118
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K D L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SALGDTPHVNLKQRFAKARRLDKPLGLNGALQLAGMQFNGQQHRALEDARNTARLLPLIL 178
>gi|398971024|ref|ZP_10683426.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM30]
gi|398139545|gb|EJM28541.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM30]
Length = 180
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V +G FQ +V+PT PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-AGREQDHFQRFVKPTRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D + E ++WL G + T +W D+D + +L+ R++
Sbjct: 62 LTHITQANIDAAQPVSEVWPAFERWL---GQHQTRLEGWASWGDYDRKQLLQEWQRLQLD 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL ++
Sbjct: 119 SLLSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFSGQQHRALEDARNTARLLPLV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|70731551|ref|YP_261292.1| exonuclease [Pseudomonas protegens Pf-5]
gi|68345850|gb|AAY93456.1| exonuclease family protein [Pseudomonas protegens Pf-5]
Length = 179
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G FQ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVSEMEIIEIGATLVN-RQGREQDHFQRFVRPLRRPMLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L E ++WL Q ++ +W D+D + L+ E +++
Sbjct: 62 LTHITQANIDSAAPLSEVWGLFERWLGQHQPRLEGWA--SWGDYDRK-QLQLEWHNQQLH 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 119 SLLNEVPHMNLKQRFAKARRLERPLGLNAALQLAGMQFTGQQHRALEDARNTARLLPLIL 178
>gi|399002708|ref|ZP_10705391.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM18]
gi|398124623|gb|EJM14131.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM18]
Length = 182
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVDR-KGRELDHFQCFVRPLRRPLLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD L + + WL Q + ++ +W D+D + +L+ R++
Sbjct: 62 LTHITQANVDAAQPLSDVWVSFEHWLGQHLSHLEGWA--SWGDYDRKQLLQEWQRLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ + +NL+ F+K R L A++LAGL + G+ H L+DA N ARLL +I
Sbjct: 120 ALSRVSH-MNLKQRFAKACRLERPLGLNGALQLAGLQFNGQQHRALEDARNTARLLPLI 177
>gi|392404561|ref|YP_006441173.1| Exonuclease RNase T and DNA polymerase III [Turneriella parva DSM
21527]
gi|390612515|gb|AFM13667.1| Exonuclease RNase T and DNA polymerase III [Turneriella parva DSM
21527]
Length = 198
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 3 YYVVIDFEATCDKERNLH--PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+Y+ +D EATC ++ + +E IE +V + S +A FQ Y+RP P LT FC
Sbjct: 10 HYIFLDLEATCARDSGIARAERETIEIGAVAIDAASNMTVATFQEYIRPVHHPSLTAFCT 69
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELTGI Q VD W+ + + + +W +D + L +CR +I
Sbjct: 70 ELTGITQATVDAAAFFPHVFARFSAWVAAI----EDCFLFSWGHFD-KKQLVLDCRRHQI 124
Query: 121 QK--PAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ PA F+ + L K+ R L+ + GL ++GR H L DA N ARL
Sbjct: 125 EYTLPAGFHDFKGLFFKKQKLLQ--RAGLEATLVQLGLRFEGRPHGALADARNTARL 179
>gi|424840756|ref|ZP_18265381.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Saprospira grandis DSM 2844]
gi|395318954|gb|EJF51875.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Saprospira grandis DSM 2844]
Length = 183
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 13/179 (7%)
Query: 4 YVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+++ D EATC D ER QEIIE +++ + + E+ + F+++VRP+ P L+DFC
Sbjct: 3 FIIYDLEATCWKTDLERRGRSQEIIEIGALLFNEYA-ELQSRFESFVRPSEHPQLSDFCT 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGL-NNTNFSVVTWSDWDCQVMLESECRIKK 119
+LTGI Q +V+ + + W+ GL ++ + +W +D + + C++
Sbjct: 62 QLTGISQIEVNQADEFPQVIEDFQDWI---GLTKGEDYLLCSWGFFDRKAFARN-CKLHD 117
Query: 120 IQKPA-YFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ PA + ++ I+L+ + ++ G R LK AVE G ++G H G+DDAIN+A++
Sbjct: 118 L--PADWTDKHISLKHQYPRIKGIRREIGLKRAVEREGFEFEGAHHRGIDDAINLAKIF 174
>gi|357145920|ref|XP_003573813.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Brachypodium distachyon]
Length = 337
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
+Y++V+D E EI+EFP V++ S E + F +VRPT E + ++
Sbjct: 127 LDYFLVLDLEGKV---------EILEFPVVMIDAHSMEFVDSFHRFVRPTAMSEQRIREY 177
Query: 59 CKELTG---IQQHQVDNGITLGEALY-------FHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
G + + D I GE L H+ W + G + + + +T +WD +
Sbjct: 178 IDGKYGKFGVDRVWHDTAIPFGEVLQEFEDWIGGHELWKQKQGESLNSAAFITCGNWDLK 237
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +C++ K++ P+YF +WINL+ + + + + + G H G+DD
Sbjct: 238 TKVPEQCKVSKLKLPSYFMEWINLKDIYLNFYNRRATGMMTMMRELQIPTVGSHHLGIDD 297
Query: 169 AINIARLLSVIMRRGFKFSIT 189
A NIAR++ ++ G IT
Sbjct: 298 AKNIARIVQRMLADGAMIQIT 318
>gi|402312615|ref|ZP_10831539.1| exonuclease [Lachnospiraceae bacterium ICM7]
gi|400369073|gb|EJP22076.1| exonuclease [Lachnospiraceae bacterium ICM7]
Length = 220
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 4 YVVIDFE--ATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++V+D E + RNL E IE ++++ EI + F+TYV+P + +T +
Sbjct: 3 HIVVDLEMNKVGKEHRNLGCTMETIEIGAIMLDENFQEI-SSFRTYVKPEYNTRITSIVR 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK- 119
+LTGI V N EAL W L G+++ + + WSD D + + E R+KK
Sbjct: 62 DLTGITYDMVINAPKFNEALKMFSNWCL--GVDD-DIKIYAWSDNDYK-QVSKELRLKKY 117
Query: 120 ----IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
I+ + N+W + + F G D + +L A+++AG+ + GR H LDDA N A+
Sbjct: 118 DISTIESKIFSNEWNDFQEEFDTELGFDKQVSLSLALDMAGINFLGREHSALDDARNTAK 177
Query: 175 LLSVIMRRGFKFSITKSLTPQA 196
L + R F T S +A
Sbjct: 178 LFHIFKDREL-FDTTLSKIAEA 198
>gi|393220516|gb|EJD06002.1| hypothetical protein FOMMEDRAFT_78644 [Fomitiporia mediterranea
MF3/22]
Length = 296
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 33/227 (14%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVV-------SGVSGEIIAC--FQTYVRPT 50
F+ ++V+D EATC + + + P EIIE+P V++ G + E+ F+++VRP
Sbjct: 50 FDSFLVLDVEATCQEGTDFNWPNEIIEWPVVLLRWRNKDKEGRAKELYVADEFRSFVRPI 109
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL-------NNTNFSVVTWS 103
++P L+ FC LTGI Q QVD + L ++L++ L F T
Sbjct: 110 WKPQLSAFCTTLTGITQTQVDRAPKFPKVLESFREFLVRNELIDDATEAKRERFVWCTDG 169
Query: 104 DWDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSKVFG--------DVRC------NLK 148
+D + + +C I KIQ P + + +++R + D R N++
Sbjct: 170 PFDIRDFVVKQCFISKIQMPTWLKGEVLDVRRVVTHCLNLQANSGGRDARAPRRRTLNIE 229
Query: 149 EAVELAGLI-WQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
E + L + GR HCG+DD NIAR+L+ + +R + ++ P
Sbjct: 230 EQLRTLNLAEFIGRQHCGIDDTRNIARILTELAKRSIRLEPNTTIYP 276
>gi|434405656|ref|YP_007148541.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
gi|428259911|gb|AFZ25861.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
Length = 183
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 3 YYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y++++D EATC + ++ H EIIE +V+++ + EI + FQ +++P LT FC
Sbjct: 4 YFLIVDLEATCCDQGSIPRHQMEIIEIGAVMLNRKTWEIDSEFQQFIQPVRNVQLTGFCT 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELT I Q V N EA+ W+ N +W ++D L+ +C K+
Sbjct: 64 ELTSISQQDVANAPQFAEAISKFKAWIDSF----PNHIFCSWGNYDKSQFLQ-DCDFHKV 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P + ++ IN++ FS+ G + + +A+ G+ +G H G+DDA NIA +
Sbjct: 119 PYP-FGSEHINIKKEFSEYLGVSKGFGMAKALNHLGIELKGTHHRGIDDARNIAAI 173
>gi|379728457|ref|YP_005320653.1| 3'-5' exonuclease [Saprospira grandis str. Lewin]
gi|378574068|gb|AFC23069.1| 3-5 exonuclease eri-1 [Saprospira grandis str. Lewin]
Length = 183
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 100/179 (55%), Gaps = 13/179 (7%)
Query: 4 YVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+++ D EATC D ER QEIIE +++ + + E+ + F+++VRP+ P L+DFC
Sbjct: 3 FIIYDLEATCWKTDVERRGRSQEIIEIGALLFNEYA-ELQSRFESFVRPSEHPKLSDFCT 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-TNFSVVTWSDWDCQVMLESECRIKK 119
+LTGI Q +V+ + W+ GL ++ + +W +D + L C++
Sbjct: 62 QLTGISQIEVNQADEFPTVIEDFQDWI---GLTKGEDYLLCSWGFFDRKA-LARNCKLHD 117
Query: 120 IQKPA-YFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ PA + ++ I+L+ + ++ G R LK AVE G ++G H G+DDAIN+A++
Sbjct: 118 L--PADWTDKHISLKHQYPRIKGIRREIGLKRAVEREGFEFEGAHHRGIDDAINLAKIF 174
>gi|146283781|ref|YP_001173934.1| exonuclease [Pseudomonas stutzeri A1501]
gi|145571986|gb|ABP81092.1| exonuclease [Pseudomonas stutzeri A1501]
Length = 217
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 3 YYVVIDFEATCDK--------ERNLHPQEI--IEFPSVVVS------GVSGEIIACFQTY 46
+ + +D EATCD RN H E+ E ++ + + I+ F +
Sbjct: 21 WLLCVDLEATCDDYPADLNEAARNAHVLEVQRDEMETIEIGIGLLDVQLEYRIVDHFGQF 80
Query: 47 VRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD 106
VRP P LT+FC LTGI Q VD E +WL N + +W D+D
Sbjct: 81 VRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGEWLRPR--NTEGWRWCSWGDYD 138
Query: 107 CQVMLESECR--IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
+ E R + + PA INL+ F K+F LK AVE GL+W+G H
Sbjct: 139 RNQLKEDAFRAGVDVLLDPARH---INLKKCFWKIFACRALGLKCAVESMGLLWEGAHHR 195
Query: 165 GLDDAINIARLLSVIM 180
+DDA N+ARL +++
Sbjct: 196 AIDDARNLARLAQLLL 211
>gi|449547643|gb|EMD38611.1| hypothetical protein CERSUDRAFT_113791 [Ceriporiopsis subvermispora
B]
Length = 266
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 44/231 (19%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV-------SGVSG--EIIACFQTYVRPT 50
+E ++V D E+TC K +P EIIE+P ++ +G + EI+ F+++V+PT
Sbjct: 10 YEAFLVFDVESTCIKGGQFDYPNEIIEWPVCLMRRKDRDGTGRAEMLEIVDEFRSFVKPT 69
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-------FSVVTWS 103
P L++FC LTGI Q Q+D T E L WL + GL +++ F
Sbjct: 70 RNPQLSEFCTNLTGITQEQIDAAPTFTEMLGEFSLWLDRKGLIDSHSGEHRIRFCWCCDG 129
Query: 104 DWDCQVMLESECRIKKIQKPAYF-NQWINLRVPFSKVFGDV-----RC-NLKEAVELAGL 156
D D + +C I KI PA+ ++IN+R + + RC +++E L
Sbjct: 130 DHDISDFVTKQCFISKIPLPAWIQGRFINVRRMVYGWYAGMLHNASRCRDMREGSNAPQL 189
Query: 157 IW--------------------QGRVHCGLDDAINIARLLSVIMRRGFKFS 187
+ QGR H G+DDA NI+R+L+ + +RG
Sbjct: 190 PYSLPEPLTIPRQLETLQLPPFQGRQHSGIDDARNISRILAELSKRGIDLE 240
>gi|28869227|ref|NP_791846.1| exonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967497|ref|ZP_03395645.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|301386461|ref|ZP_07234879.1| exonuclease, putative [Pseudomonas syringae pv. tomato Max13]
gi|302059344|ref|ZP_07250885.1| exonuclease, putative [Pseudomonas syringae pv. tomato K40]
gi|302131217|ref|ZP_07257207.1| exonuclease, putative [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422658314|ref|ZP_16720749.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28852468|gb|AAO55541.1| exonuclease, putative [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927798|gb|EEB61345.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|331016942|gb|EGH96998.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 180
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FCKE
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCKE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHISQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYDRQ-QLEEEWRRHQLG 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|422589316|ref|ZP_16663979.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422651554|ref|ZP_16714348.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330876090|gb|EGH10239.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330964631|gb|EGH64891.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 180
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FCKE
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCKE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHINQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYDRQ-QLEEEWRHHQLG 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|333900627|ref|YP_004474500.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
gi|333115892|gb|AEF22406.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
Length = 187
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 7/184 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
Y++VID EAT ++ + EIIE + +V SG I FQ +VRP P+LT FC++
Sbjct: 3 YWLVIDLEATTEEGGWPVEHMEIIEIGASLVDA-SGHEIDHFQRFVRPLRRPILTRFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD TL ++WL + +W D+D Q LE + +
Sbjct: 62 LTHIAQADVDAAATLPTLWPQFERWLEPHHARLGGW--CSWGDYDRQ-QLEQDWHQHGLT 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLS-VI 179
+NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL VI
Sbjct: 119 SHLQTLPHLNLKQRFAKARQLARPVGLNAALQLAGISFSGQQHRALNDARNTARLLPLVI 178
Query: 180 MRRG 183
RG
Sbjct: 179 TERG 182
>gi|388545903|ref|ZP_10149182.1| exonuclease [Pseudomonas sp. M47T1]
gi|388276020|gb|EIK95603.1| exonuclease [Pseudomonas sp. M47T1]
Length = 206
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 1 FEYYVVIDFEATCDKERN-----------LHPQEIIEFPSVVVSGVSGEIIACFQTYVRP 49
+ Y + +D EATCD++ E IE V+ S +++ FQ++VRP
Sbjct: 20 YRYLLCVDLEATCDEDAKPGEPPCQLIVQREDMETIEIGLAVIDLSSLKVVDQFQSFVRP 79
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQV 109
T P+LTDFC+ LT I+Q VD D +L ++ N +W D+D +
Sbjct: 80 TLHPVLTDFCRALTTIKQSDVDAAPDYVWVAQMLDAFL----VDYPNSMWCSWGDYDFKQ 135
Query: 110 MLESECRIKKIQKPAYFN-QWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ + R+ +P + NL+ KV+ L+ AVE+ G+ W+G H G+DD
Sbjct: 136 LQQDASRLNC--RPMLDGMRHTNLKKWHWKVYDCRALGLQPAVEMLGMEWEGTYHRGIDD 193
Query: 169 AINIARL 175
A N+A +
Sbjct: 194 ARNVASV 200
>gi|398993339|ref|ZP_10696291.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
gi|398135099|gb|EJM24227.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
Length = 180
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V G + FQ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RKGRELDHFQRFVRPLRRPLLTLFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D L E ++WL Q ++ +W D+D + +++ R++
Sbjct: 62 LTRITQGNIDAAQPLTEVWPAFERWLGQHHSRLEGWA--SWGDYDRKQLVQEWERLQLDS 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ +NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +I+
Sbjct: 120 ALSRVPH-MNLKQRFAKARRLERPLGLNGALQLAGMQFTGQQHRALEDARNTARLLPLIL 178
>gi|422647744|ref|ZP_16710871.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961285|gb|EGH61545.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 180
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPVRRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHITQSNIDSAAPLTAVWPQFERWLAHHRARVVGWA--SWGDYDRQ-QLEEEWRNHQLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPLGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|312883579|ref|ZP_07743304.1| hypothetical protein VIBC2010_12209 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368802|gb|EFP96329.1| hypothetical protein VIBC2010_12209 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 176
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 88/180 (48%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + SGEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGIGRTGEIIEIGLAEIDLTSGEIVKRAQYYVKPEADEV-SQFCTELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G +LGE L K +N +W D V+L++EC K ++
Sbjct: 66 GISPRKIEKQGRSLGEVLNSMKK-----NFGGSNKIYASWGRDD--VILQNECAKKGLEM 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL F D R K A E+ G+ W+GR H G DA N+A+L V++
Sbjct: 119 P--FREFINLATLFRIQNRLKDKRVGHKVAQEMKGITWEGRQHSGYVDAYNLAKLALVML 176
>gi|422298001|ref|ZP_16385624.1| exonuclease [Pseudomonas avellanae BPIC 631]
gi|407990435|gb|EKG32522.1| exonuclease [Pseudomonas avellanae BPIC 631]
Length = 181
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FCKE
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCKE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 63 LTHINQSNIDSAAPLTTVWPQFERWLSHHRARVVGWA--SWGDYDRQ-QLEEEWRHHQLG 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 120 SVLSSMPHVNLKQRFAQARQLQKPVGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|302525599|ref|ZP_07277941.1| exonuclease superfamily protein [Streptomyces sp. AA4]
gi|302434494|gb|EFL06310.1| exonuclease superfamily protein [Streptomyces sp. AA4]
Length = 193
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV +GE +A + VRP + + FC ELT
Sbjct: 16 VVDVEATCWENQPPPGQVSEIIEIGLTVVDLRAGERVAKHRILVRPARSEV-SPFCTELT 74
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G++ EA L + T +W D+D + +CR + P
Sbjct: 75 GLTQSEVDGGLSFREACR-----TLAVRHRTTELPWASWGDYD-RNQFTRQCRHTGTEYP 128
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ N +V F+ +G R + +A+ +AGL +GR H G DDA NI L+ I +R
Sbjct: 129 -FTGLHTNAKVAFTAAYGLRRRPGMAQALAVAGLPLEGRHHRGDDDAWNIGALVLEIAKR 187
Query: 183 G 183
G
Sbjct: 188 G 188
>gi|302185096|ref|ZP_07261769.1| exonuclease [Pseudomonas syringae pv. syringae 642]
Length = 180
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
INL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSGMPHINLKQRFAQARQLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|419956272|ref|ZP_14472376.1| exonuclease [Pseudomonas stutzeri TS44]
gi|387966927|gb|EIK51248.1| exonuclease [Pseudomonas stutzeri TS44]
Length = 217
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 3 YYVVIDFEATCDK--------ERNLH-------PQEIIEFPSVVVS-GVSGEIIACFQTY 46
+ + +D EATCD+ RN H E IE ++ + I+ F +
Sbjct: 21 WLLCVDLEATCDEYPAGLNEAARNAHVLKVQRDEMETIEIGIALLDVQLEYRIVDHFGQF 80
Query: 47 VRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD 106
VRP P LT+FC LTGI Q VD E WL N + +W D+D
Sbjct: 81 VRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGDWLRPR--NTEGWRWCSWGDYD 138
Query: 107 CQVMLESECR--IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
+ E R + + PA INL+ F K+F LK AVE GL W+G H
Sbjct: 139 RNQLKEDAFRAGVDVLLDPARH---INLKKCFWKIFACRALGLKCAVENIGLSWEGEHHR 195
Query: 165 GLDDAINIARLLSVIM 180
+DDA N+ARL +++
Sbjct: 196 AIDDARNLARLAQLLL 211
>gi|341874213|gb|EGT30148.1| CBN-CRN-4 protein [Caenorhabditis brenneri]
Length = 298
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII--ACFQTYVRPTFEPLLTDF 58
F + +++DFE T ++ +P E+I+F VV+ + I+ F YVRP P+L+
Sbjct: 8 FTHLLILDFETTSEEANCDYPFEVIQFSVVVLDVKTNTILENVSFNKYVRPVINPILSKH 67
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C + TGI Q +D+ T E WL G F+VV S D + + + ++
Sbjct: 68 CADFTGIAQESLDSAATFREVYNQFVNWLNTNGFAERQFAVVCDSRQDMWRIAQYQFKLI 127
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELA---------GLIWQGRVHCGLDDA 169
P++F Q+++L F R KE +E GL GR H L+D
Sbjct: 128 NATLPSFFRQYVSLWRAFEA--EQDRSGRKELLEKTYIGKMAEYYGLDTTGRAHDSLNDC 185
Query: 170 INIARLLSVIMRRGFKFSITKSLTPQA 196
IA ++ ++ G I + L A
Sbjct: 186 KTIATIVQKMLATGATIHINEVLVCSA 212
>gi|168056660|ref|XP_001780337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668285|gb|EDQ54896.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
FE+Y+V+D E EI+EFP ++++ + E++ F +VRP E ++
Sbjct: 44 FEFYLVLDLEGRV---------EILEFPVLLINAQTLEVVDRFHRFVRPVIMTEERQAEY 94
Query: 59 CKELTG---IQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSDWDCQ 108
K G + + D I E L + W+ L N T + VT +WD +
Sbjct: 95 IKGKYGRWGLDRVWHDTAIPFTEVLNAFESWMESHSLYNPEDPSKLTRAAFVTCGNWDVK 154
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +CR I+ YFN+WINL+ + + + ++ + G H GLDD
Sbjct: 155 TKIPEQCRDSGIELKPYFNEWINLKDIYYNFYRRRAGGMLAMLKGLNIPLTGTHHVGLDD 214
Query: 169 AINIARLLSVIMRRGFKFSITKSLTPQANPNCLTW 203
A NIA++L ++ G I+ ++P + W
Sbjct: 215 AHNIAQILQRMLAHGAIVRISAK-RKVSDPKAVRW 248
>gi|431926089|ref|YP_007239123.1| exonuclease [Pseudomonas stutzeri RCH2]
gi|431824376|gb|AGA85493.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas stutzeri RCH2]
Length = 217
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 3 YYVVIDFEATCDK--------ERNLH-------PQEIIEFPSVVVS-GVSGEIIACFQTY 46
+ + +D EATCD+ RN H E IE ++ + I+ F +
Sbjct: 21 WLLCVDLEATCDEYPAGLNEAARNAHVLKVQRDEMETIEIGIALLDVQLEYRIVDHFGQF 80
Query: 47 VRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD 106
VRP P LT+FC LTGI Q VD E WL N + +W D+D
Sbjct: 81 VRPLLRPTLTEFCTGLTGISQSDVDTAKRFAEVQDQLGDWLRPR--NTEGWRWCSWGDYD 138
Query: 107 CQVMLESECR--IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHC 164
+ E R + + PA INL+ F K+F LK AVE GL W+G H
Sbjct: 139 RNQLKEDAFRAGVDVLLDPARH---INLKKCFWKIFACRALGLKCAVENIGLSWEGEHHR 195
Query: 165 GLDDAINIARLLSVIM 180
+DDA N+ARL +++
Sbjct: 196 AIDDARNLARLAQLLL 211
>gi|156395505|ref|XP_001637151.1| predicted protein [Nematostella vectensis]
gi|156224261|gb|EDO45088.1| predicted protein [Nematostella vectensis]
Length = 151
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 77/192 (40%), Gaps = 52/192 (27%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+YY+V+DFEATCD + PQEIIEFP V+ + + A F YV PT P LT FC
Sbjct: 12 FDYYLVLDFEATCDDKNKPKPQEIIEFPVTKVNSRTLQTEAEFHQYVCPTAHPKLTTFCT 71
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+LTGI Q V+ L L QV + + KI
Sbjct: 72 DLTGITQDMVEGKPDLQTTL---------------------------QVYSDVMGKQSKI 104
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P + GL GR H G+DDA NI ++L +
Sbjct: 105 GMPGMLHGL-------------------------GLELVGRHHSGIDDARNITKILVALA 139
Query: 181 RRGFKFSITKSL 192
R+ S T +
Sbjct: 140 RKHPNISATGKM 151
>gi|289679622|ref|ZP_06500512.1| exonuclease [Pseudomonas syringae pv. syringae FF5]
gi|422617306|ref|ZP_16686009.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|422669598|ref|ZP_16729442.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440721500|ref|ZP_20901897.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440724547|ref|ZP_20904827.1| exonuclease [Pseudomonas syringae BRIP34881]
gi|330897689|gb|EGH29108.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|330981951|gb|EGH80054.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440363363|gb|ELQ00531.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440369840|gb|ELQ06794.1| exonuclease [Pseudomonas syringae BRIP34881]
Length = 180
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|162312186|ref|XP_001713129.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe
972h-]
gi|121732820|sp|Q08I43.1|ERI1_SCHPO RecName: Full=3'-5' exonuclease eri1; AltName: Full=Enhanced RNAi
protein
gi|115345157|emb|CAL48264.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe]
Length = 313
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y +++D EATC++ EIIE P ++ + II F +YVRP+ P L+D+C
Sbjct: 79 LRYLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYC 138
Query: 60 KELTGIQQHQVDNGITLGEA-------LYFHDKWLLQ-----------MGLNNTNFSVVT 101
K LTGIQQ VD + L H L+ + T
Sbjct: 139 KSLTGIQQCTVDKAPIFSDVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWA 198
Query: 102 WS---DWDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSKVFGDVRCNLKEAVELAGLI 157
W+ WD L + + K+ P + ++++R + V+ R N+ +E GL
Sbjct: 199 WACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQ 258
Query: 158 WQGRVHCGLDDAINIARLLSVIMRRGFKFS 187
++G H G+DDA N++R++ + +F
Sbjct: 259 FEGSEHRGIDDARNLSRIVKKMCSENVEFE 288
>gi|422642046|ref|ZP_16705466.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440746649|ref|ZP_20925929.1| exonuclease [Pseudomonas syringae BRIP39023]
gi|330954430|gb|EGH54690.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440370909|gb|ELQ07774.1| exonuclease [Pseudomonas syringae BRIP39023]
Length = 180
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRQHHLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|422675576|ref|ZP_16734919.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
gi|330973293|gb|EGH73359.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
Length = 180
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARHLQKPIGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 178
>gi|268571701|ref|XP_002648789.1| Hypothetical protein CBG11812 [Caenorhabditis briggsae]
Length = 302
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII---ACFQTYVRPTFEPLLTD 57
F+ +++DFE TC++ HP EII+ SVVV ++ ++I F V+P L+
Sbjct: 9 FDDLLILDFETTCEEGVFDHPVEIIQM-SVVVLNITDKLIREDVVFNKLVKPVVNQKLSQ 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+C ELTGIQQ VD +WL + L+ F+ D + + + +
Sbjct: 68 YCIELTGIQQDAVDKADIFSVVYQQFLEWLKKHNLDERKFAFACDGRQDMWRLAQYQFLL 127
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDV----------RCNLKEAVELAGLIWQGRVHCGLD 167
K PA F QWIN+ +++F D+ R NL++ + ++G H +D
Sbjct: 128 IKENFPAIFRQWINI----NRIFQDIAKEKYLSIAGRSNLEKMSNFFEIKFEGHAHNAMD 183
Query: 168 DAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
D +A++ I+ G ++ ++L NC++
Sbjct: 184 DVKFLAQVAKKILDTGRFVTVNETL------NCIS 212
>gi|424071559|ref|ZP_17808982.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443644642|ref|ZP_21128492.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
gi|407998647|gb|EKG39048.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443284659|gb|ELS43664.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
Length = 181
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|237797629|ref|ZP_04586090.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020479|gb|EGI00536.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 180
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPVRRPLLTHFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHISQSNIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYDRQ-QLEEEWRHHQLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +IM
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPLGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIM 178
>gi|395448144|ref|YP_006388397.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
gi|388562141|gb|AFK71282.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
Length = 183
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVT-REGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VDN E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDNAAPFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHDL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|148546859|ref|YP_001266961.1| exonuclease [Pseudomonas putida F1]
gi|397693483|ref|YP_006531363.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|421525362|ref|ZP_15971977.1| exonuclease [Pseudomonas putida LS46]
gi|148510917|gb|ABQ77777.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas putida F1]
gi|397330213|gb|AFO46572.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|402750835|gb|EJX11354.1| exonuclease [Pseudomonas putida LS46]
Length = 183
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVT-REGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VDN E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDNAAPFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHGL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|66045076|ref|YP_234917.1| exonuclease [Pseudomonas syringae pv. syringae B728a]
gi|63255783|gb|AAY36879.1| Exonuclease [Pseudomonas syringae pv. syringae B728a]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPIGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|440694628|ref|ZP_20877231.1| exonuclease [Streptomyces turgidiscabies Car8]
gi|440283339|gb|ELP70625.1| exonuclease [Streptomyces turgidiscabies Car8]
Length = 194
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 2 EYYV-VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
EY V V+D EATC + EIIE V+ +GE +A + V+P +++F
Sbjct: 7 EYLVNVVDVEATCWAGSQPPGAVSEIIEVGLTVIDLAAGERLARHRILVKP-VRSTVSEF 65
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C ELTG+ QH+VD G++ EA LL V+W D+D + +C+
Sbjct: 66 CTELTGLTQHEVDQGVSFAEACR-----LLAAEHRAGTRPWVSWGDYD-RHQFTRQCQAT 119
Query: 119 KIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + N + F++ +G R + +A+++AG +GR H G DDA NIA L+
Sbjct: 120 RTSYP-FGRHHTNAKAVFTEAYGLRKRPGMAQALKIAGRQLEGRHHRGEDDAWNIAALVL 178
Query: 178 VIMRRGF 184
+ +R
Sbjct: 179 HLSQRDL 185
>gi|289626405|ref|ZP_06459359.1| exonuclease [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289649559|ref|ZP_06480902.1| exonuclease [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581480|ref|ZP_16656622.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422606238|ref|ZP_16678248.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
gi|298159084|gb|EFI00143.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330866329|gb|EGH01038.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330889890|gb|EGH22551.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
Length = 180
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPVLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHINQSSIDSAAPLTAVWPQFERWLSHHRARVLGWA--SWGDYDRQ-QLEEEWRYHRLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIL 178
>gi|257484494|ref|ZP_05638535.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422595885|ref|ZP_16670170.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422683913|ref|ZP_16742168.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330986187|gb|EGH84290.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013242|gb|EGH93298.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 180
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPVLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYDRQ-QLEEEWRYHRLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFTGQQHRALVDARNTARLLPLIL 178
>gi|398845736|ref|ZP_10602756.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
gi|398253249|gb|EJN38386.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
Length = 181
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +VRP P LT FC++
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVT-REGREVDHFQRFVRPRRRPQLTPFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ E ++WL G + V+W D+D Q +L+ E + ++
Sbjct: 62 LTKISQANVDSAAAFPEVWARFERWL---GHHRGQLQAWVSWGDYDRQQLLQ-EWQQHEL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A+ LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRNLPHINLKQRFAKARHLQRPTGLNGALHLAGMHFSGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|170722729|ref|YP_001750417.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
gi|169760732|gb|ACA74048.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
Length = 181
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V+ G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEIIEIGASLVT-REGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ E ++WL G + V+W D+D Q +L+ E + ++
Sbjct: 62 LTHISQANVDSAAPFPEVWARFERWL---GHHRGQLQAWVSWGDYDRQQLLQ-EWQQHEL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRNLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|71736737|ref|YP_274026.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|416017607|ref|ZP_11564687.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|416026040|ref|ZP_11569614.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|71557290|gb|AAZ36501.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323478|gb|EFW79563.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|320329479|gb|EFW85471.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 180
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPVLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYDRQ-QLEEEWRYHRLD 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 119 SALSSMPHVNLKQRFAQARQLQKPMGLNSALQLAGMQFAGQQHRALVDARNTARLLPLIL 178
>gi|408676060|ref|YP_006875887.1| hypothetical protein SVEN_0341 [Streptomyces venezuelae ATCC 10712]
gi|328880389|emb|CCA53628.1| hypothetical protein SVEN_0341 [Streptomyces venezuelae ATCC 10712]
Length = 200
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 6 VIDFEATC-DKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
++D EATC D ER EIIE VV +GE ++ + VRP ++ FC ELT
Sbjct: 9 IVDVEATCWDGERPPGAVSEIIEIGLTVVDLAAGERLSRHRILVRPA-RSRVSAFCTELT 67
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ A LL +W D+D + +CR P
Sbjct: 68 GLTQAEVDTGLDFAAACR-----LLATTYEAGARPWASWGDYD-RKQFALQCRATGTPYP 121
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ ++ N + F++ FG R + +A+E+AGL +GR H G DDA NIA L+ ++ R
Sbjct: 122 -FGHRHTNAKAVFTEAFGLRRRPGMAQALEIAGLPLEGRHHRGEDDAWNIAALVLLVAGR 180
>gi|18400647|ref|NP_566502.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|75331425|sp|Q8W566.1|Y3514_ARATH RecName: Full=Uncharacterized exonuclease domain-containing protein
At3g15140
gi|16930517|gb|AAL31944.1|AF419612_1 AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|19310525|gb|AAL84996.1| AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|332642103|gb|AEE75624.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 337
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
F +++VID E EI+EFP ++V + E++ F +VRPT E + +
Sbjct: 126 FNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKY 176
Query: 59 CK----ELTGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNTNFSVVTWSDW 105
+ EL G+ + D I + + + WL + GLN+ F VT +W
Sbjct: 177 IEGKYGEL-GVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAF--VTCGNW 233
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D + + +C + I P YF +WINL+ + +G + + G+ G H G
Sbjct: 234 DIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLG 293
Query: 166 LDDAINIARLLSVIMRRG--FKFSITKSLTPQANPNCLTWNR 205
+DD NI R++ ++ G K + +S + N L NR
Sbjct: 294 IDDTKNITRVVQRMLSEGAVLKLTARRSKSNMRNVEFLFKNR 335
>gi|302692530|ref|XP_003035944.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
gi|300109640|gb|EFJ01042.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
Length = 369
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 43/230 (18%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV---------SGVSGEIIACFQTYVRPT 50
++ ++V+D E TC + +P EIIEFP ++ + E++ F ++VRPT
Sbjct: 115 YDAFLVVDVEGTCMQGTTFSYPNEIIEFPVCLMRWRDKADDGTASELEVVDTFHSFVRPT 174
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL--NNTNFSVVTW---SD- 104
+ P+L+ FC +LTGI Q QVD + L ++++ GL T +V + SD
Sbjct: 175 WRPVLSQFCTDLTGITQSQVDAAPPFADVLRSFYAFMIRHGLIDRRTGKRLVKYCWCSDG 234
Query: 105 -WDCQVMLESECRIKKIQKPAYFN-QWINLRVPFSK-----------------------V 139
+D + + +C + +I P + +++RVP + +
Sbjct: 235 PFDLRDFVVKQCFLSRIVFPEWMRGDVLDVRVPVMQWMDEQSSSSDTSSTTSGSPPSSPM 294
Query: 140 FGDVRC-NLKEAVELAGLI-WQGRVHCGLDDAINIARLLSVIMRRGFKFS 187
F R N+ + GL +QGR H G+DD NI R+L+ + RRG +
Sbjct: 295 FPRRRTPNIPAQLRALGLPEFQGRQHSGIDDTRNICRILAELARRGVQLK 344
>gi|441503050|ref|ZP_20985057.1| hypothetical protein C942_04419 [Photobacterium sp. AK15]
gi|441429266|gb|ELR66721.1| hypothetical protein C942_04419 [Photobacterium sp. AK15]
Length = 184
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F V D E C + R EIIE + VSGEI+ Q +V+P + + + FC
Sbjct: 3 FNRIVCFDLEMCCWNDGRESRTGEIIEIGVAELDLVSGEIVRRAQHFVKPEHDEV-SPFC 61
Query: 60 KELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ + NG L L +K + G + ++ W D +L++EC K
Sbjct: 62 TELTGIKPEVIKKNGKPLATILKSIEK---KFGGRHKIYAA--WGRDD--QILQAECEEK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I+ P F +++NL F + + RC + A+E+AG+ W+GR H G DDA N+ARL
Sbjct: 115 GIKVP--FTEYLNLATLFRLQRHVNNKRCGQRAAMEMAGIGWEGRQHSGYDDAYNLARLA 172
Query: 177 SVI 179
+
Sbjct: 173 KTM 175
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
F +++VID E EI+EFP ++V + E++ F +VRPT E + +
Sbjct: 126 FNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKY 176
Query: 59 CK----ELTGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNTNFSVVTWSDW 105
+ EL G+ + D I + + + WL + GLN+ F VT +W
Sbjct: 177 IEGKYGEL-GVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAF--VTCGNW 233
Query: 106 DCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCG 165
D + + +C + I P YF +WINL+ + +G + + G+ G H G
Sbjct: 234 DIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLG 293
Query: 166 LDDAINIARLLSVIMRRG--FKFSITKSLTPQANPNCLTWNR 205
+DD NI R++ ++ G K + +S + N L NR
Sbjct: 294 IDDTKNITRVVQRMLSEGAVLKLTARRSKSNMRNVEFLFKNR 335
>gi|357013126|ref|ZP_09078125.1| 3-5 exonuclease eri-1 [Paenibacillus elgii B69]
Length = 177
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y+V D EATC + EIIE +V ++ EI+ FQT+V+P P L+DFCK+LT
Sbjct: 3 YIVFDLEATCWEHDRTKQNEIIEIGAVKINE-QLEIVDEFQTFVKPILNPWLSDFCKKLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q V+ +A+ W + ++ + +W +D + L +C + ++
Sbjct: 62 SITQEDVNQADYFPQAIQQFQDW-----IGKEDYFLCSWGLYD-KSQLTKDCELNRLGTE 115
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
N I+++ K+ G R + A+++ L +G H G+DDA NIA++ I +
Sbjct: 116 WLANH-ISIKHQHGKLIGKERGVGMARALDMLKLPLEGTHHRGIDDARNIAKIFVRIFDK 174
>gi|325275518|ref|ZP_08141430.1| exonuclease [Pseudomonas sp. TJI-51]
gi|324099350|gb|EGB97284.1| exonuclease [Pseudomonas sp. TJI-51]
Length = 183
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + E+IE + +V+ G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEVIEIGASLVT-REGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD E + WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDAAAPFREVWASFEHWL---GQHREQLQAWVSWGDYDRQ-QLHQEWHLHGV 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLAHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|388546571|ref|ZP_10149845.1| exonuclease [Pseudomonas sp. M47T1]
gi|388275319|gb|EIK94907.1| exonuclease [Pseudomonas sp. M47T1]
Length = 180
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGASLVT-RDGREVDHFQRFVRPHRRPCLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q +D+ L + ++WL G ++ N V+W D+D Q +L S + ++
Sbjct: 62 LTHITQANIDSAAPLTDVWPQFERWL---GHHHANLQGWVSWGDYDRQQLLLS-WQQHQL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
NL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 HSLLADVPHTNLKQRFAKARKLQRPLGLNGALQLAGMNFNGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|167034808|ref|YP_001670039.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
gi|166861296|gb|ABY99703.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
Length = 183
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D+ + EIIE + +V+ G + FQ +VRP P LT FC+E
Sbjct: 3 HWLVIDLEATTDEGGWPVTEMEIIEIGASLVT-REGREVDHFQRFVRPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWANVERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHGL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|399010408|ref|ZP_10712781.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
gi|398107131|gb|EJL97138.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
Length = 210
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 27/194 (13%)
Query: 7 IDFEATCD---------KERNLHPQ--EIIEFPSVVVSGVSG-EIIACFQTYVRPTFEPL 54
+D EATCD ++ ++ P+ EIIE +V+ +S A F VRPT P+
Sbjct: 25 VDLEATCDEIMPGIQSSRQLSIQPKDMEIIEIGLIVLDRLSNLSTTAEFSRLVRPTVHPI 84
Query: 55 LTDFCKELTGIQQHQVDNGITL----GEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVM 110
LT FC LTGI+Q V+ IT E F + +L+ + +W +D
Sbjct: 85 LTSFCTSLTGIKQIDVERAITFPTVNNELNVFLEPYLIDGAV------WCSWGRYDAD-Q 137
Query: 111 LESECRIKKIQKPAYFNQWINLRVP--FSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
L +C +++ + + +L V +S+ FG LKEA + G+ W G H DD
Sbjct: 138 LRQDC--TRLEVTSLLTELEHLEVDEFYSRAFGISAPCLKEATKSMGIAWHGAYHRAPDD 195
Query: 169 AINIARLLSVIMRR 182
A N+ARLL+ ++ R
Sbjct: 196 ARNLARLLAKLLDR 209
>gi|218198144|gb|EEC80571.1| hypothetical protein OsI_22899 [Oryza sativa Indica Group]
Length = 335
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
+Y++V+D E EI+EFP V++ S E + F +V PT E + ++
Sbjct: 125 LDYFLVLDLEGKV---------EILEFPVVMIDAQSMEFVDSFHRFVHPTVMSEQRIREY 175
Query: 59 CKELTG---IQQHQVDNGITLGEALY-------FHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
+ G + + D I E L H W + G + + +T +WD +
Sbjct: 176 IEGKYGKFGVDRVWHDTAIPFMEVLQEFEDWIEHHKFWKKEQGGALNSAAFITCGNWDLK 235
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +CR+ KI+ P+YF +WINL+ + + + + + G H G+DD
Sbjct: 236 TKVPEQCRVSKIKLPSYFMEWINLKDIYLNFYSRRATGMMTMMRELQMPIVGSHHLGIDD 295
Query: 169 AINIARLLSVIMRRGFKFSIT 189
A NIAR++ ++ G IT
Sbjct: 296 AKNIARVVQRMLADGAVMQIT 316
>gi|239988372|ref|ZP_04709036.1| hypothetical protein SrosN1_13780 [Streptomyces roseosporus NRRL
11379]
gi|291445358|ref|ZP_06584748.1| exonuclease [Streptomyces roseosporus NRRL 15998]
gi|291348305|gb|EFE75209.1| exonuclease [Streptomyces roseosporus NRRL 15998]
Length = 202
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV +GE +A + VRP ++ FC ELT
Sbjct: 25 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPA-RSKVSPFCTELT 83
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ EA +L +W D+D + +CR P
Sbjct: 84 GLTQTEVDGGLPFAEACR-----VLAAEHRTGLLPWASWGDYD-RNQFTRQCRATGTAYP 137
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + N + F+ +G R + +A+E AGL +GR H G DDA NIA L+ +M R
Sbjct: 138 -FGQRHTNAKATFTAAYGLRRRPGMAQALETAGLPLEGRHHRGDDDAWNIAALVLDLMGR 196
Query: 183 G 183
G
Sbjct: 197 G 197
>gi|410090114|ref|ZP_11286714.1| exonuclease [Pseudomonas viridiflava UASWS0038]
gi|409762575|gb|EKN47588.1| exonuclease [Pseudomonas viridiflava UASWS0038]
Length = 180
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP P+LT FC++
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPVRRPVLTHFCRD 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD--CQVMLESECRIKK 119
LT I Q+ +D T ++W L++ VV W+ W + LE + R
Sbjct: 62 LTHISQNNIDGAATFPVVWPLFERW-----LSHHRARVVGWASWGDYDRKQLEEQWRQHD 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ ++NL+ F++ R L A++LAG+ + G+ H L DA N ARLL +
Sbjct: 117 MTSALSDMPYVNLKQRFAQARQLQRPVGLNSALQLAGMQFTGQQHRALVDARNTARLLPL 176
Query: 179 IM 180
I+
Sbjct: 177 IL 178
>gi|222641267|gb|EEE69399.1| hypothetical protein OsJ_28756 [Oryza sativa Japonica Group]
Length = 335
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
+Y++V+D E EI+EFP V++ S E + F +V PT E + ++
Sbjct: 125 LDYFLVLDLEGKV---------EILEFPVVMIDAQSMEFVDSFHRFVHPTAMSEQRIREY 175
Query: 59 CKELTG---IQQHQVDNGITLGEALY-------FHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
+ G + + D I E L H W + G + + +T +WD +
Sbjct: 176 IEGKYGKFGVDRVWHDTAIPFMEVLQEFEDWIEHHKFWKKEQGGALNSAAFITCGNWDLK 235
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +CR+ KI+ P+YF +WINL+ + + + + + G H G+DD
Sbjct: 236 TKVPEQCRVSKIKLPSYFMEWINLKDIYLNFYNRRATGMMTMMRELQMPIVGSHHLGIDD 295
Query: 169 AINIARLLSVIMRRGFKFSIT 189
A NIAR++ ++ G IT
Sbjct: 296 AKNIARVVQRMLADGAVMQIT 316
>gi|433605464|ref|YP_007037833.1| hypothetical protein BN6_36650 [Saccharothrix espanaensis DSM
44229]
gi|407883317|emb|CCH30960.1| hypothetical protein BN6_36650 [Saccharothrix espanaensis DSM
44229]
Length = 200
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + P EI+E VV SG + + VRP ++ FC ELT
Sbjct: 17 VVDVEATCWDGQPPPGQPSEIVEIGLTVVDLASGTRVGKHRVLVRPRRS-TVSAFCTELT 75
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G++ EA LL + +W D+D + +C+ + P
Sbjct: 76 GLTQAEVDTGLSFAEACR-----LLATEHDAGTRPWASWGDYD-RNQFTRQCQATGTRYP 129
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ N +V F+ G R + +A+E+AGL +GR H G DDA NIA L+
Sbjct: 130 -FGRVHTNAKVAFTAAHGLRKRPGMSQALEIAGLPLEGRHHRGEDDAWNIAALV 182
>gi|206969814|ref|ZP_03230768.1| sporulation inhibitor KapD [Bacillus cereus AH1134]
gi|228955173|ref|ZP_04117183.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229072394|ref|ZP_04205597.1| Sporulation inhibitor KapD [Bacillus cereus F65185]
gi|229082156|ref|ZP_04214621.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-2]
gi|229193176|ref|ZP_04320128.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 10876]
gi|365163124|ref|ZP_09359244.1| hypothetical protein HMPREF1014_04707 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411319|ref|ZP_17388439.1| hypothetical protein IE1_00623 [Bacillus cereus BAG3O-2]
gi|423427027|ref|ZP_17404058.1| hypothetical protein IE5_04716 [Bacillus cereus BAG3X2-2]
gi|423432895|ref|ZP_17409899.1| hypothetical protein IE7_04711 [Bacillus cereus BAG4O-1]
gi|423438326|ref|ZP_17415307.1| hypothetical protein IE9_04507 [Bacillus cereus BAG4X12-1]
gi|423507667|ref|ZP_17484235.1| hypothetical protein IG1_05209 [Bacillus cereus HD73]
gi|449091863|ref|YP_007424304.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|206735502|gb|EDZ52670.1| sporulation inhibitor KapD [Bacillus cereus AH1134]
gi|228590296|gb|EEK48163.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 10876]
gi|228701148|gb|EEL53669.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-2]
gi|228710717|gb|EEL62689.1| Sporulation inhibitor KapD [Bacillus cereus F65185]
gi|228804514|gb|EEM51123.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|363616965|gb|EHL68382.1| hypothetical protein HMPREF1014_04707 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401107853|gb|EJQ15795.1| hypothetical protein IE1_00623 [Bacillus cereus BAG3O-2]
gi|401109642|gb|EJQ17564.1| hypothetical protein IE5_04716 [Bacillus cereus BAG3X2-2]
gi|401114041|gb|EJQ21906.1| hypothetical protein IE7_04711 [Bacillus cereus BAG4O-1]
gi|401117941|gb|EJQ25774.1| hypothetical protein IE9_04507 [Bacillus cereus BAG4X12-1]
gi|402443370|gb|EJV75276.1| hypothetical protein IG1_05209 [Bacillus cereus HD73]
gi|449025620|gb|AGE80783.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 207
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + ++ ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFPELVKKLSEY-----ETKCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 IAFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|319647558|ref|ZP_08001778.1| KapD protein [Bacillus sp. BT1B_CT2]
gi|423683640|ref|ZP_17658479.1| sporulation inhibitor KapD [Bacillus licheniformis WX-02]
gi|317390406|gb|EFV71213.1| KapD protein [Bacillus sp. BT1B_CT2]
gi|383440414|gb|EID48189.1| sporulation inhibitor KapD [Bacillus licheniformis WX-02]
Length = 205
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E HPQ EIIE + +V V E++ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYHPQNFFPEIIE--AGIVKAVHDEVVETFSSYIKPKKFPKLTRRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD GIT + + L ++ + N ++TW + D +V L+ C +
Sbjct: 64 NFLSITQEQVDQGITFNALI----EKLRELDPDR-NSVIITWGNMDMKV-LKQNCMFNHV 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + + FGD NL +A E G G+ H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDSGTGKQHKALDDAMTTYKLFRLV 176
Query: 180 MR 181
R
Sbjct: 177 ER 178
>gi|30022952|ref|NP_834583.1| sporulation inhibitor KapD [Bacillus cereus ATCC 14579]
gi|75760253|ref|ZP_00740306.1| Exonuclease KapD [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218234761|ref|YP_002369702.1| sporulation inhibitor KapD [Bacillus cereus B4264]
gi|218900061|ref|YP_002448472.1| sporulation inhibitor KapD [Bacillus cereus G9842]
gi|228903410|ref|ZP_04067538.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 4222]
gi|228910746|ref|ZP_04074555.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 200]
gi|228923644|ref|ZP_04086923.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228961163|ref|ZP_04122785.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228968015|ref|ZP_04129023.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar sotto
str. T04001]
gi|229048603|ref|ZP_04194161.1| Sporulation inhibitor KapD [Bacillus cereus AH676]
gi|229112353|ref|ZP_04241891.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-15]
gi|229130170|ref|ZP_04259130.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-Cer4]
gi|229147462|ref|ZP_04275810.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST24]
gi|229153098|ref|ZP_04281278.1| Sporulation inhibitor KapD [Bacillus cereus m1550]
gi|296505353|ref|YP_003667053.1| sporulation inhibitor KapD [Bacillus thuringiensis BMB171]
gi|402563587|ref|YP_006606311.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-771]
gi|423363504|ref|ZP_17341002.1| hypothetical protein IC1_05479 [Bacillus cereus VD022]
gi|423386418|ref|ZP_17363673.1| hypothetical protein ICE_04163 [Bacillus cereus BAG1X1-2]
gi|423566205|ref|ZP_17542480.1| hypothetical protein II5_05608 [Bacillus cereus MSX-A1]
gi|423583103|ref|ZP_17559214.1| hypothetical protein IIA_04618 [Bacillus cereus VD014]
gi|423588763|ref|ZP_17564849.1| hypothetical protein IIE_04174 [Bacillus cereus VD045]
gi|423631622|ref|ZP_17607369.1| hypothetical protein IK5_04472 [Bacillus cereus VD154]
gi|423634221|ref|ZP_17609874.1| hypothetical protein IK7_00630 [Bacillus cereus VD156]
gi|423644103|ref|ZP_17619720.1| hypothetical protein IK9_04047 [Bacillus cereus VD166]
gi|423650788|ref|ZP_17626358.1| hypothetical protein IKA_04575 [Bacillus cereus VD169]
gi|423657843|ref|ZP_17633142.1| hypothetical protein IKG_04831 [Bacillus cereus VD200]
gi|434378059|ref|YP_006612703.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-789]
gi|29898511|gb|AAP11784.1| Exonuclease KapD [Bacillus cereus ATCC 14579]
gi|74492248|gb|EAO55411.1| Exonuclease KapD [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|218162718|gb|ACK62710.1| sporulation inhibitor KapD [Bacillus cereus B4264]
gi|218544233|gb|ACK96627.1| sporulation inhibitor KapD [Bacillus cereus G9842]
gi|228630364|gb|EEK87013.1| Sporulation inhibitor KapD [Bacillus cereus m1550]
gi|228636007|gb|EEK92489.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST24]
gi|228653284|gb|EEL09162.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-Cer4]
gi|228671001|gb|EEL26307.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-15]
gi|228722722|gb|EEL74109.1| Sporulation inhibitor KapD [Bacillus cereus AH676]
gi|228791686|gb|EEM39280.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228798510|gb|EEM45501.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228836005|gb|EEM81367.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228848697|gb|EEM93542.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 200]
gi|228856231|gb|EEN00763.1| Sporulation inhibitor KapD [Bacillus thuringiensis IBL 4222]
gi|296326405|gb|ADH09333.1| sporulation inhibitor KapD [Bacillus thuringiensis BMB171]
gi|401075239|gb|EJP83625.1| hypothetical protein IC1_05479 [Bacillus cereus VD022]
gi|401192519|gb|EJQ99534.1| hypothetical protein II5_05608 [Bacillus cereus MSX-A1]
gi|401210012|gb|EJR16767.1| hypothetical protein IIA_04618 [Bacillus cereus VD014]
gi|401225571|gb|EJR32118.1| hypothetical protein IIE_04174 [Bacillus cereus VD045]
gi|401263759|gb|EJR69881.1| hypothetical protein IK5_04472 [Bacillus cereus VD154]
gi|401271895|gb|EJR77897.1| hypothetical protein IK9_04047 [Bacillus cereus VD166]
gi|401281004|gb|EJR86919.1| hypothetical protein IKA_04575 [Bacillus cereus VD169]
gi|401281467|gb|EJR87378.1| hypothetical protein IK7_00630 [Bacillus cereus VD156]
gi|401288708|gb|EJR94452.1| hypothetical protein IKG_04831 [Bacillus cereus VD200]
gi|401632775|gb|EJS50559.1| hypothetical protein ICE_04163 [Bacillus cereus BAG1X1-2]
gi|401792239|gb|AFQ18278.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-771]
gi|401876616|gb|AFQ28783.1| sporulation inhibitor KapD [Bacillus thuringiensis HD-789]
Length = 207
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + K L + ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFPELV----KKLAEYE-TKCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 IAFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|421530501|ref|ZP_15976978.1| exonuclease [Pseudomonas putida S11]
gi|402212047|gb|EJT83467.1| exonuclease [Pseudomonas putida S11]
Length = 183
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVT-RDGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ + E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHGL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|229181208|ref|ZP_04308539.1| Sporulation inhibitor KapD [Bacillus cereus 172560W]
gi|228602262|gb|EEK59752.1| Sporulation inhibitor KapD [Bacillus cereus 172560W]
Length = 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + ++ ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFPELVKKLSEY-----ETKCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 ITFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|228942073|ref|ZP_04104614.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228975003|ref|ZP_04135563.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981594|ref|ZP_04141890.1| Sporulation inhibitor KapD [Bacillus thuringiensis Bt407]
gi|384188966|ref|YP_005574862.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410677294|ref|YP_006929665.1| putative 3'-5' exonuclease KapD [Bacillus thuringiensis Bt407]
gi|452201373|ref|YP_007481454.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|228778079|gb|EEM26350.1| Sporulation inhibitor KapD [Bacillus thuringiensis Bt407]
gi|228784708|gb|EEM32727.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817589|gb|EEM63673.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326942675|gb|AEA18571.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409176423|gb|AFV20728.1| putative 3'-5' exonuclease KapD [Bacillus thuringiensis Bt407]
gi|452106766|gb|AGG03706.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGRKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + K L + ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFPELV----KKLAEYE-TKCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 IAFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|386011207|ref|YP_005929484.1| Exonuclease [Pseudomonas putida BIRD-1]
gi|313497913|gb|ADR59279.1| Exonuclease [Pseudomonas putida BIRD-1]
Length = 183
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVT-REGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHSL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|213409417|ref|XP_002175479.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
gi|212003526|gb|EEB09186.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
Length = 311
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y +V+D EATC++ + EIIEFP ++ II F TYV+P P L+++C
Sbjct: 62 LRYLLVVDVEATCEEGCGFSYMNEIIEFPCLLYDLEQKRIIDEFHTYVKPRRIPTLSNYC 121
Query: 60 KELTGIQQHQVDNGIT-------LGEALYFHDKWLLQ--MGLNNTNFSVV---------- 100
KELT I Q +DN L E L HD L+ G N +S +
Sbjct: 122 KELTKIPQKLIDNAPPFKTVLDLLHEFLSKHDDKLIPPVNGPNTFEWSRLPKTAYHFRSQ 181
Query: 101 ---TWS---DWDCQVMLESE-CRIKKIQKPAYFN-QWINLRVPFSKVFGDVRCNLKEAVE 152
W+ WD + E ++ P++ N ++++R FS F + N+ +
Sbjct: 182 KNWAWACDGPWDMASFVAKEFATTEENNPPSWINGPFVDVRSLFSDAFRVSKSNINAMLS 241
Query: 153 LAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFS 187
L ++G+ H GLDDA N+ R++ + + +F
Sbjct: 242 RWNLTFEGQEHNGLDDARNLVRVIQHMQQEDIEFE 276
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
F +++VID E EI+EFP ++V + E++ F +VRPT E + +
Sbjct: 123 FNFFLVIDLEGKV---------EILEFPVLIVDAKTMEVVDLFHRFVRPTKMSEQAINKY 173
Query: 59 CKEL---TGIQQHQVDNGITLGEALYFHDKWLLQM---------GLNNTNFSVVTWSDWD 106
+ G+ + D I + + + WL + LN+ F +T +WD
Sbjct: 174 IEGKYGEVGVDRVWHDTAIPFKQVVEEFEAWLAEHDLWTKDTDGALNDAAF--ITCGNWD 231
Query: 107 CQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGL 166
+ + +C + I P YF +WINL+ + +G + + G+ G H G+
Sbjct: 232 IKTKIPEQCVVSNINLPPYFTEWINLKDIYLNFYGREARGMVSMMRQCGIKLMGSHHLGI 291
Query: 167 DDAINIARLLSVIMRRGFKFSIT--KSLTPQANPNCLTWNR 205
DD NI R++ ++ G IT +S + N L NR
Sbjct: 292 DDTKNITRVVQRMLSEGAVLKITARRSKSNTRNVEFLFKNR 332
>gi|90409780|ref|ZP_01217797.1| hypothetical protein P3TCK_03416 [Photobacterium profundum 3TCK]
gi|90329133|gb|EAS45390.1| hypothetical protein P3TCK_03416 [Photobacterium profundum 3TCK]
Length = 186
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F V D E C + R+ EIIE + +GEI+ Q YV+P + + ++FC
Sbjct: 3 FNRIVCFDLEMCCWNDGRDPKTGEIIEIGLAELDLDTGEIVRRTQHYVKPEHDEI-SEFC 61
Query: 60 KELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ + NG L E L ++ + W D +L +EC K
Sbjct: 62 TELTGIKPQVIHKNGKPLAEILRS-----MESKFGGKHKIYAAWGHDD--RILHAECAAK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P F ++INL + F + RC + A+E+AGL W+GR H G DA N+ARL
Sbjct: 115 GLKVP--FTEYINLAMIFRLQRHVKKKRCGQRAAMEIAGLEWEGRQHSGYVDAYNLARLT 172
Query: 177 SVI 179
+
Sbjct: 173 RTL 175
>gi|431803551|ref|YP_007230454.1| exonuclease [Pseudomonas putida HB3267]
gi|430794316|gb|AGA74511.1| exonuclease [Pseudomonas putida HB3267]
Length = 183
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVT-RDGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ + E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHGL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|424067173|ref|ZP_17804630.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408001332|gb|EKG41648.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 181
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +V P PLLT FC+E
Sbjct: 4 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVHPARRPLLTHFCRE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R +
Sbjct: 63 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARIVGWA--SWGDYDRQ-QLEEEWRHHHLD 119
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F++ + L A++LAG+ + G+ H L DA N ARLL +I+
Sbjct: 120 SALSSMPHVNLKQRFAQARHLQKPMGLNSALQLAGMQFSGQQHRALVDARNTARLLPLIL 179
>gi|138896523|ref|YP_001126976.1| sporulation inhibitor KapD [Geobacillus thermodenitrificans NG80-2]
gi|134268036|gb|ABO68231.1| Sporulation inhibitor KapD [Geobacillus thermodenitrificans NG80-2]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 4 YVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y+ +DFE T + + N EIIE V V V +I++ F +YV+P P LTD CK
Sbjct: 7 YLFLDFEFTMPETKTTPNGFSPEIIEVGLVAV--VDEQIVSQFSSYVKPLRFPQLTDRCK 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q Q+D+G++ E + LL+ +VVTW + D +V+ E+ C+ ++
Sbjct: 65 SFLNITQEQIDSGMSFYELV-----SLLRQYDRERPTTVVTWGNMDMKVLREN-CQSARV 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +I
Sbjct: 119 EFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEGIGKAHCALDDAFTAYTIFRLI 177
>gi|182438132|ref|YP_001825851.1| hypothetical protein SGR_4339 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466648|dbj|BAG21168.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 190
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + Q EIIE VV +G +A + VRP + + FC ELT
Sbjct: 13 VVDVEATCWDGQPPPGQVNEIIEIGLTVVDLRAGRRLAKHRLLVRPARSKV-SPFCTELT 71
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ EA +L + +W D+D + +CR + P
Sbjct: 72 GLTQAEVDGGLPFAEACR-----VLAVEHRTGQLPWASWGDYD-RNQFTRQCRATDAEYP 125
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + N +V F+ +G R + +A+E+AGL +GR H G DDA NIA L+ + R
Sbjct: 126 -FGQRHTNAKVAFTASYGLRRRPGMAQALEVAGLPLEGRHHRGDDDAWNIAALVLDLAGR 184
Query: 183 G 183
G
Sbjct: 185 G 185
>gi|423613070|ref|ZP_17588930.1| hypothetical protein IIM_03784 [Bacillus cereus VD107]
gi|401242632|gb|EJR49005.1| hypothetical protein IIM_03784 [Bacillus cereus VD107]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEIGLVSVVGCKVE--NTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFHELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ + P +F Q+ +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 MAGVAFP-FFGQFRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|326778782|ref|ZP_08238047.1| Exonuclease RNase T and DNA polymerase III [Streptomyces griseus
XylebKG-1]
gi|326659115|gb|EGE43961.1| Exonuclease RNase T and DNA polymerase III [Streptomyces griseus
XylebKG-1]
Length = 190
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + Q EIIE VV +G +A + VRP + + FC ELT
Sbjct: 13 VVDVEATCWDGQPPPGQVNEIIEIGLTVVDLRAGRRLAKHRLLVRPARSKV-SPFCTELT 71
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ EA +L + +W D+D + +CR + P
Sbjct: 72 GLTQAEVDGGLPFAEACR-----VLAVEHRTGRLPWASWGDYD-RNQFTRQCRATDAEYP 125
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + N +V F+ +G R + +A+E+AGL +GR H G DDA NIA L+ + R
Sbjct: 126 -FGQRHTNAKVAFTASYGLRRRPGMAQALEVAGLPLEGRHHRGDDDAWNIAALVLDLAGR 184
Query: 183 G 183
G
Sbjct: 185 G 185
>gi|149603424|ref|XP_001513729.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Ornithorhynchus
anatinus]
Length = 85
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y++V+DFEATCDK + +HPQEIIEFP + ++G + EI + F YV+P P LT FC
Sbjct: 22 YHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCT 80
Query: 61 ELTGI 65
ELTGI
Sbjct: 81 ELTGI 85
>gi|54301691|ref|YP_131684.1| hypothetical protein PBPRB0011 [Photobacterium profundum SS9]
gi|46915111|emb|CAG21884.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 191
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F V D E C + R+ EIIE + +GEI+ Q YV+P + + ++FC
Sbjct: 8 FNRIVCFDLEMCCWNDGRDPKTGEIIEIGLAELDLDTGEIVRRTQHYVKPEHDEI-SEFC 66
Query: 60 KELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ + NG L E L ++ + W D +L +EC K
Sbjct: 67 TELTGIKPQVIHKNGKPLAEILRS-----MESKFGGKHKIYAAWGHDD--RILHAECAAK 119
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P F ++INL + F + RC + A+E+AGL W+GR H G DA N+ARL
Sbjct: 120 GLKVP--FTEYINLAMIFRLQRHVKKKRCGQRAAMEIAGLEWEGRQHSGYVDAYNLARLT 177
Query: 177 SVI 179
+
Sbjct: 178 RTL 180
>gi|52081642|ref|YP_080433.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404490525|ref|YP_006714631.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52004853|gb|AAU24795.1| KapD [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349527|gb|AAU42161.1| sporulation inhibitor KapD [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 205
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E HPQ FP ++ +G V E++ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYHPQNF--FPEIIEAGIVKTVHDEVVETFSSYIKPKKFPKLTRRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD GIT + + L ++ + N ++TW + D +V L+ C +
Sbjct: 64 NFLSITQEQVDQGITFNALI----EKLRELDPDR-NSVIITWGNMDMKV-LKQNCMFNHV 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + + FGD NL +A E G G+ H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDSGTGKQHKALDDAMTTYKLFRLV 176
Query: 180 MR 181
R
Sbjct: 177 ER 178
>gi|171909847|ref|ZP_02925317.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Verrucomicrobium spinosum DSM 4136]
Length = 200
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 3 YYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ ++ID EATC +R P+ EIIE +V++ G + E ++ F T+++P P+LT FC
Sbjct: 14 HLLIIDLEATC-CDRGKVPRDEMEIIEIGAVLLDGKTLETVSEFGTFIKPVRHPVLTPFC 72
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LT I Q +VD EAL WL + FS +W +D + + +C
Sbjct: 73 TKLTTITQAEVDAAPMFPEALAKLKAWL--EPYPDCMFS--SWGAYD-KGQFQLDCAFHD 127
Query: 120 IQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + +NL+ F++ G R + +A+ + L +G H G+DDA N+AR+++
Sbjct: 128 LPYP-FSEAHLNLKKAFAEARGLKKRPGMGQALGMLRLELEGTHHRGIDDARNMARIVA 185
>gi|452973131|gb|EME72953.1| sporulation inhibitor KapD [Bacillus sonorensis L12]
Length = 205
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E HPQ FP ++ +G V E+ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYHPQNF--FPEIIEAGIVKVVDDEVAETFSSYIKPKKFPKLTRRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q +VD G+T F DK L+ + N ++TW + D +V L+ C +
Sbjct: 64 SFLNITQEKVDQGMTFHS---FIDK--LKELDPDQNSVIITWGNMDMKV-LKQNCMFNHV 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + + FGD NL +A E G + G+ H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSMEYKEFFGDKTLTNLWKAAEEYGDLGTGKQHKALDDAMTTYKLFQLV 176
Query: 180 MR 181
R
Sbjct: 177 ER 178
>gi|269126134|ref|YP_003299504.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
gi|268311092|gb|ACY97466.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
Length = 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
VID EATC + EIIE VV + + +A VRP + + FC ELT
Sbjct: 13 VIDVEATCWEGSPPDGQVSEIIEIGLCVVDLAACKRVARHGILVRPERSSV-SPFCTELT 71
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G Q +V+ G+TL EA +L+ + +W D+D + E +C + P
Sbjct: 72 GWTQQEVERGVTLAEACR-----ILEREHCARSRPWASWGDYD-RKQFERQCAAGQADYP 125
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + IN + F++V+G R + +A+++AGL +GR H G+DDA NIA L+ I R
Sbjct: 126 -FGARHINAKAVFTEVYGLRRRPGMAQALQIAGLPLEGRHHRGVDDAWNIAALVLDIAAR 184
Query: 183 G 183
G
Sbjct: 185 G 185
>gi|423527253|ref|ZP_17503698.1| hypothetical protein IGE_00805 [Bacillus cereus HuB1-1]
gi|402453838|gb|EJV85637.1| hypothetical protein IGE_00805 [Bacillus cereus HuB1-1]
Length = 207
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + K L + ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFPELV----KKLAEYE-TKCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 IVFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|336367654|gb|EGN95998.1| hypothetical protein SERLA73DRAFT_185475 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380368|gb|EGO21521.1| hypothetical protein SERLADRAFT_473977 [Serpula lacrymans var.
lacrymans S7.9]
Length = 380
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 1 FEYYVVIDFEATCDKERNLH-PQEIIEFPSVVVS-------GVSGEIIAC--FQTYVRPT 50
++ ++V+D EATC + P EIIE+P ++ G + +++ F+++V+PT
Sbjct: 130 YDAFLVLDVEATCLQGAGFEWPNEIIEWPVCLMKWKDKSSKGKASQLVVVDEFRSFVKPT 189
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTW-SD- 104
+ P L+ FC ELTGI Q QV++ T + L ++L Q GL N W SD
Sbjct: 190 WRPQLSQFCTELTGITQTQVNSAPTFPKVLKSFARFLSQNGLIDPKNGRPLLRFCWCSDG 249
Query: 105 -WDCQVMLESECRIKKIQKPAYF-----------NQWI-------NLRVPFSKVFGDVRC 145
+D + + +C + KI P + + W N G
Sbjct: 250 PFDIRDFVVKQCFLSKIPMPVWLRGDVLDVRKVVSAWSASQTMQENYEAKTRSASGSRLR 309
Query: 146 NLKEAVELAGL---IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
+L ++L L ++GR H G+DD NIAR+++ + RR + + P
Sbjct: 310 SLNIPLQLRALGLSAFEGRQHSGIDDTRNIARIITELARRSIRLEPNTPINP 361
>gi|304406144|ref|ZP_07387801.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus
curdlanolyticus YK9]
gi|304344728|gb|EFM10565.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus
curdlanolyticus YK9]
Length = 223
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEI-IACFQTYVRPTFEPLLTDFCKE 61
Y+V D E T +++ + +IIE +V + G G I I FQTYV+P ++T E
Sbjct: 4 YIVYDLEFTVLRKQQ-YAADIIEIGAVKLTDGDQGPIEIDRFQTYVKPERNKVITTHTTE 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q QVD T +A+ +W + +T + + +W D Q + +CR KI+
Sbjct: 63 FTGITQEQVDAAPTFPDAIDLFRQW-----IGDTTYYLCSWGPDDKQHFVR-QCRDMKIE 116
Query: 122 KPAYFNQWINLRVPFSKVFGD---VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ +L++ ++K+ G+ R L A+E AG ++ G H LDDA N ARL
Sbjct: 117 L-NWLRNMNDLQLYYTKLQGNDASKRIGLARALETAGFVFDGAQHRALDDAANTARLF 173
>gi|226945053|ref|YP_002800126.1| Exonuclease [Azotobacter vinelandii DJ]
gi|226719980|gb|ACO79151.1| Exonuclease [Azotobacter vinelandii DJ]
Length = 185
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ ++VID EAT D+ + EIIE + +V+ +G + F+ +VRP PLLT FC
Sbjct: 1 MDKWLVIDLEATTDEGGWPVADMEIIEIGASLVN-RNGHELDHFKRFVRPLRRPLLTLFC 59
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+ELT I Q +D+ L + WL ++ +W D+D + LE E R
Sbjct: 60 QELTHIAQSDIDSATPLPMVWEQFEHWLAPYRPRLAGWT--SWGDYDRR-QLEQEWRRHG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ +NL+ F+ R L+ A++LAG+ +QG+ H L+DA N ARLL +
Sbjct: 117 LASSLIPLSHVNLKQRFADTRQLKRPVGLRTALQLAGMSFQGQQHRALEDARNTARLLPL 176
>gi|339488533|ref|YP_004703061.1| exonuclease [Pseudomonas putida S16]
gi|338839376|gb|AEJ14181.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
S16]
Length = 183
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVIEMEVIEIGASLVT-RDGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ + E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQASVDSAASFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQHGL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPAGLNGALQLAGMHFCGQQHRALEDARNTARLLPLS 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|26990938|ref|NP_746363.1| exonuclease [Pseudomonas putida KT2440]
gi|24985960|gb|AAN69827.1|AE016622_4 exonuclease [Pseudomonas putida KT2440]
Length = 183
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + E+IE + +V+ G + FQ +V+P P LT FC+E
Sbjct: 3 HWLVIDLEATTDDGGWPVTEMEVIEIGASLVT-REGREVDHFQRFVKPRRRPQLTPFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKKI 120
LT I Q VD+ E ++WL G + V+W D+D Q L E + +
Sbjct: 62 LTHISQADVDSAAPFREVWASFERWL---GHHRGQLQAWVSWGDYDRQ-QLHQEWQQYSL 117
Query: 121 QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
INL+ F+K R L A++LAG+ + G+ H L+DA N ARLL +
Sbjct: 118 DSLLRTLPHINLKQRFAKARHLQRPTGLNGALQLAGMHFCGQQHRALEDARNTARLLPLT 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|365865345|ref|ZP_09404996.1| hypothetical protein SPW_5300 [Streptomyces sp. W007]
gi|364005178|gb|EHM26267.1| hypothetical protein SPW_5300 [Streptomyces sp. W007]
Length = 190
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV +GE +A + VRP ++ FC ELT
Sbjct: 13 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPA-RSTVSPFCTELT 71
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G++ EA L + +W D+D + +CR + P
Sbjct: 72 GLTQAEVDGGLSFAEACR-----TLAVEHRTGLLPWASWGDYD-RNQFTRQCRATGTEYP 125
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ N +V F+ +G R + +A+ +AGL +GR H G DDA NIA L+ + R
Sbjct: 126 -FGQSHTNAKVAFTAAYGLRRRPGMAQALTVAGLPLEGRHHRGDDDAWNIAALVLDLAGR 184
Query: 183 G 183
G
Sbjct: 185 G 185
>gi|308511231|ref|XP_003117798.1| CRE-CRN-4 protein [Caenorhabditis remanei]
gi|308238444|gb|EFO82396.1| CRE-CRN-4 protein [Caenorhabditis remanei]
Length = 300
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIA---CFQTYVRPTFEPLLTD 57
++ +++DFE T D + +P E+I+F SV V V I+ F YVRP P L+
Sbjct: 8 YDNLLMLDFETTSDGVYHDYPFEVIQF-SVAVLDVKSNTISDDVSFNEYVRPVINPKLSS 66
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+C +LTGI+Q +D T WL Q F++V+ S D + + + R+
Sbjct: 67 YCADLTGIKQETLDKADTFLNVYKKFLSWLDQNNFEEKKFALVSDSRQDMWRIAQYQFRL 126
Query: 118 KKIQKPAYFNQWINLRVPF---------SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ P+ F Q+INL F K+ G+ +++ G+ G H + D
Sbjct: 127 CREPLPSMFRQYINLWRTFGENMTMEERDKLEGNTY--MEKMAIFHGVKSPGGAHNAMID 184
Query: 169 AINIARLLSVIMRRGFKFSITKSLT 193
+ +AR+ I+ G I ++L
Sbjct: 185 CLTLARITQKILESGASVYINEALV 209
>gi|229076290|ref|ZP_04209255.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-18]
gi|229099371|ref|ZP_04230301.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-29]
gi|229105531|ref|ZP_04236165.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-28]
gi|229118383|ref|ZP_04247737.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-3]
gi|423377256|ref|ZP_17354540.1| hypothetical protein IC9_00609 [Bacillus cereus BAG1O-2]
gi|423440367|ref|ZP_17417273.1| hypothetical protein IEA_00697 [Bacillus cereus BAG4X2-1]
gi|423449484|ref|ZP_17426363.1| hypothetical protein IEC_04092 [Bacillus cereus BAG5O-1]
gi|423463430|ref|ZP_17440198.1| hypothetical protein IEK_00617 [Bacillus cereus BAG6O-1]
gi|423532783|ref|ZP_17509201.1| hypothetical protein IGI_00615 [Bacillus cereus HuB2-9]
gi|423541954|ref|ZP_17518344.1| hypothetical protein IGK_04045 [Bacillus cereus HuB4-10]
gi|423548186|ref|ZP_17524544.1| hypothetical protein IGO_04621 [Bacillus cereus HuB5-5]
gi|423619366|ref|ZP_17595199.1| hypothetical protein IIO_04691 [Bacillus cereus VD115]
gi|423622020|ref|ZP_17597798.1| hypothetical protein IK3_00618 [Bacillus cereus VD148]
gi|228664953|gb|EEL20441.1| Sporulation inhibitor KapD [Bacillus cereus Rock1-3]
gi|228677801|gb|EEL32044.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-28]
gi|228683995|gb|EEL37943.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-29]
gi|228706725|gb|EEL58933.1| Sporulation inhibitor KapD [Bacillus cereus Rock4-18]
gi|401127765|gb|EJQ35472.1| hypothetical protein IEC_04092 [Bacillus cereus BAG5O-1]
gi|401169291|gb|EJQ76537.1| hypothetical protein IGK_04045 [Bacillus cereus HuB4-10]
gi|401176215|gb|EJQ83411.1| hypothetical protein IGO_04621 [Bacillus cereus HuB5-5]
gi|401251403|gb|EJR57681.1| hypothetical protein IIO_04691 [Bacillus cereus VD115]
gi|401262688|gb|EJR68829.1| hypothetical protein IK3_00618 [Bacillus cereus VD148]
gi|401639858|gb|EJS57595.1| hypothetical protein IC9_00609 [Bacillus cereus BAG1O-2]
gi|402420138|gb|EJV52410.1| hypothetical protein IEA_00697 [Bacillus cereus BAG4X2-1]
gi|402422301|gb|EJV54543.1| hypothetical protein IEK_00617 [Bacillus cereus BAG6O-1]
gi|402464760|gb|EJV96449.1| hypothetical protein IGI_00615 [Bacillus cereus HuB2-9]
Length = 207
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + DK L ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEIVDKGISFPELI---DK--LAEYEKRCKPTIVTWGNMDMKV-LKHNCEMSG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 VAFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|162457127|ref|YP_001619494.1| hypothetical protein sce8842 [Sorangium cellulosum So ce56]
gi|161167709|emb|CAN99014.1| Hypothetical protein T07A9.5a [Sorangium cellulosum So ce56]
Length = 214
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+Y+VID EATC + + EIIE +V+V + A Q +VRP P L+ F
Sbjct: 4 LTHYLVIDLEATCSDDPSFPRDEMEIIEVGAVLVDAGTLRPAAELQCFVRPIRHPRLSAF 63
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C LT I+Q VD + L+ + +W +D + LE + R
Sbjct: 64 CMRLTSIRQADVDA-----APRFPAAAARLRELVRGRQALFCSWGGYD-KRQLERDARRH 117
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P + +NL+ F++ G R + +A+ GL +QG H +DDA NIARLL
Sbjct: 118 GVALP-FGGDHLNLKRAFARRLGAERELGVGQALRRVGLSFQGTQHRAIDDARNIARLL 175
>gi|225461547|ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140 [Vitis vinifera]
Length = 319
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
++++V+D E EI+EFP ++++ + +++ F +VRP+ E + ++
Sbjct: 108 LDFFLVLDLEGKI---------EILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEY 158
Query: 59 CKEL---TGIQQHQVDNGITLGEALYFHDKWLLQ-------MGLNNTNFSVVTWSDWDCQ 108
+ G+ + D I E + + WL Q MG + VT +WD +
Sbjct: 159 IEGKYGKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLK 218
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +C++ K++ P YF +WINL+ + + + ++ + G H G+DD
Sbjct: 219 TKVPQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDD 278
Query: 169 AINIARLLSVIMRRGFKFSIT 189
NIAR+L ++ G IT
Sbjct: 279 TKNIARVLQRMLADGALLQIT 299
>gi|338813768|ref|ZP_08625857.1| sporulation inhibitor KapD [Acetonema longum DSM 6540]
gi|337274260|gb|EGO62808.1| sporulation inhibitor KapD [Acetonema longum DSM 6540]
Length = 205
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++++DFE T + P+ EIIE +V+++ + E +Q+YVRP F P LT+ C
Sbjct: 8 FLIVDFEFTTHRNGPGRPRAFFPEIIEAGAVLLTPPAYEAGDSYQSYVRPRFFPRLTEEC 67
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+ +T IQQ +D GIT+ E + + GL +V W + D V+ + C K
Sbjct: 68 RNITLIQQRDIDAGITM-EKMLEDLSQNYRAGLT----YIVAWGNADRDVIANA-CVRYK 121
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
I P ++ +I+L + ++ R +LK A+ + G H LDDA+N A++L
Sbjct: 122 IDCPFSWDDYIDLAEEYKVLYSLERLASLKSALIERKITQTGLSHLALDDALNTAQVLKK 181
Query: 179 IMRRGFK 185
++ G++
Sbjct: 182 MLAEGWQ 188
>gi|423513620|ref|ZP_17490150.1| hypothetical protein IG3_05116 [Bacillus cereus HuA2-1]
gi|402445285|gb|EJV77158.1| hypothetical protein IG3_05116 [Bacillus cereus HuA2-1]
Length = 207
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V+G E + +++RP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVAGCKVE--DTYSSHIRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K + ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFHELVEKLAEYEK--------SGKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MAGVEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|407646661|ref|YP_006810420.1| hypothetical protein O3I_027485 [Nocardia brasiliensis ATCC 700358]
gi|407309545|gb|AFU03446.1| hypothetical protein O3I_027485 [Nocardia brasiliensis ATCC 700358]
Length = 190
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC EIIE VV SG A + VRP +++FC ELT
Sbjct: 10 VVDVEATCWAGTPPPGAVSEIIEIGLTVVDLGSGARTAKHRILVRPA-RSTVSEFCTELT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ EA LL +W D+D + ++C P
Sbjct: 69 GLTQDEVDTGVEFAEACR-----LLAADHAAGTRPWASWGDYD-RKQFRNQCAATGTAYP 122
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ ++ N ++ FS+ +G R + A+++AGL +GR H G DDA NIA L+ I R
Sbjct: 123 -FGSRHTNAKLVFSEAYGLPKRQGMAGALQIAGLPLEGRHHSGADDAWNIAALVLDITGR 181
Query: 183 G 183
G
Sbjct: 182 G 182
>gi|302562577|ref|ZP_07314919.1| exonuclease superfamily protein [Streptomyces griseoflavus Tu4000]
gi|302480195|gb|EFL43288.1| exonuclease superfamily protein [Streptomyces griseoflavus Tu4000]
Length = 194
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + EIIE V+ +GE +A + VRP ++ FC ELT
Sbjct: 12 VVDVEATCWAGSQPPGEVSEIIEIGLAVLDLDAGERLARHRILVRP-VRSTVSKFCSELT 70
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV--VTWSDWDCQVMLESECRIKKIQ 121
G+ QH+VD G+ EA Q+ + + V+W D+D + +C +
Sbjct: 71 GLTQHEVDQGLAFAEACQ-------QLAAEHCAGARPWVSWGDYD-RFQFTRQCHATRTP 122
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P + + N + F++ R + +A+E+AGL +GR H G DDA NIA L+ +
Sbjct: 123 YP-FGRRHTNAKAVFTEAHSLRKRPGMAQALEIAGLRLEGRHHRGEDDAWNIAALVLHLA 181
Query: 181 RRG 183
RG
Sbjct: 182 ERG 184
>gi|411003211|ref|ZP_11379540.1| hypothetical protein SgloC_10443 [Streptomyces globisporus C-1027]
Length = 190
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV +GE +A + VRP + + FC ELT
Sbjct: 13 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPARSEV-SPFCTELT 71
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+ EA +L +W D+D + +CR P
Sbjct: 72 GLTQAEVDGGLPFAEACR-----VLAAEHRTGPLPWASWGDYD-RNQFTRQCRATGAAYP 125
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ ++ N + F+ +G R + +A+E AGL +GR H G DDA NI L+ ++ R
Sbjct: 126 -FGQRYTNAKAAFTAAYGLRRRPGMVQALETAGLPLEGRHHRGDDDAWNIGALVLDLVGR 184
Query: 183 G 183
G
Sbjct: 185 G 185
>gi|429331283|ref|ZP_19212045.1| exonuclease [Pseudomonas putida CSV86]
gi|428764039|gb|EKX86192.1| exonuclease [Pseudomonas putida CSV86]
Length = 183
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT D + EIIE + +V+ G + FQ +V+P P LT FC++
Sbjct: 3 HWLVIDLEATTDDGGWPITEMEIIEIGASLVN-REGREVDHFQRFVKPRRRPQLTAFCRQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q VD + ++WL ++ +W D+D + +L+ E + I
Sbjct: 62 LTHITQANVDGAAPFADVWEQFERWLGNYQPRLEGWT--SWGDYDRKQLLQ-EWQANGID 118
Query: 122 KPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+NL+ F+K R L A++LAGL +QG+ H L+DA N ARLL + +
Sbjct: 119 SLLARVPHLNLKQRFAKARHLSRPPGLNGALQLAGLQFQGQQHRALEDARNTARLLPLTL 178
>gi|196250879|ref|ZP_03149564.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
G11MC16]
gi|196209608|gb|EDY04382.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
G11MC16]
Length = 207
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 4 YVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y+ +DFE T + + N EIIE V V V +I+ F +YV+P P LTD CK
Sbjct: 7 YLFLDFEFTMPETKTTPNGFSPEIIEVGLVAV--VDEQIVNQFSSYVKPLRFPQLTDRCK 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q Q+D+G++ E + LL+ +VVTW + D +V+ E+ C+ ++
Sbjct: 65 SFLNITQEQIDSGMSFYELV-----SLLRQYDRERPTTVVTWGNMDMKVLREN-CQSARV 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +I
Sbjct: 119 EFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEGIGKAHCALDDAFTAYTIFRLI 177
>gi|224115354|ref|XP_002317011.1| predicted protein [Populus trichocarpa]
gi|222860076|gb|EEE97623.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 39/218 (17%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF-------EP 53
F++++V D E EI+EFP +++ + ++ F +VRPT E
Sbjct: 49 FDFFLVFDLEGKV---------EILEFPVLIIDAKTMGVVDLFHRFVRPTAMSEERVNEY 99
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGL---------NNTNFSVVTWSD 104
+ + K G+ + D + E L + WL Q L N F VT +
Sbjct: 100 IYNKYGK--FGVDRVWHDTALPFNEVLQQFESWLTQHNLWEKTRGGRLNRAAF--VTCGN 155
Query: 105 WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQ----- 159
WD + + +C + K++ P YF +WINL+ V+ + EA + ++ Q
Sbjct: 156 WDVKTQVPHQCSVSKLKLPPYFMEWINLK----DVYQNFYNPRNEARGMRTMMSQLKIPM 211
Query: 160 -GRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQA 196
G H GLDD NIAR+L ++ G IT P++
Sbjct: 212 VGSHHLGLDDTKNIARVLLRMLADGAVLPITARRKPES 249
>gi|159463698|ref|XP_001690079.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284067|gb|EDP09817.1| predicted protein [Chlamydomonas reinhardtii]
Length = 91
Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EIIE V++ S E+ FQ YVRPT PLL FC ELTGI+Q QVD LGE L
Sbjct: 1 EIIELSCVLLDAHSLEVRGEFQAYVRPTEHPLLDPFCVELTGIEQAQVDTAAPLGEVLER 60
Query: 83 HDKWLLQMGL----NNTNFSVVTWSDWDCQV 109
D WL G + + VTW+DWD +V
Sbjct: 61 LDGWLRGRGALPARPDCSLLPVTWTDWDLKV 91
>gi|423394852|ref|ZP_17372053.1| hypothetical protein ICU_00546 [Bacillus cereus BAG2X1-1]
gi|423405712|ref|ZP_17382861.1| hypothetical protein ICY_00397 [Bacillus cereus BAG2X1-3]
gi|401656323|gb|EJS73844.1| hypothetical protein ICU_00546 [Bacillus cereus BAG2X1-1]
gi|401660924|gb|EJS78397.1| hypothetical protein ICY_00397 [Bacillus cereus BAG2X1-3]
Length = 207
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------KCKPTIVTWGNMDMKV-LKQNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ + P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 MAGVAFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|423521215|ref|ZP_17497688.1| hypothetical protein IGC_00598 [Bacillus cereus HuA4-10]
gi|401179586|gb|EJQ86757.1| hypothetical protein IGC_00598 [Bacillus cereus HuA4-10]
Length = 207
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +++RP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHIRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K + ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFHELVEKLAEYEK--------RSKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MAGVKFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|410454188|ref|ZP_11308130.1| sporulation inhibitor KapD [Bacillus bataviensis LMG 21833]
gi|409932499|gb|EKN69460.1| sporulation inhibitor KapD [Bacillus bataviensis LMG 21833]
Length = 207
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T ERN+ + EIIE V V V +I F +YV P P L++ C
Sbjct: 7 YLFIDFEFTM-PERNVRMKDFFAEIIEVGIVAV--VDDQITEQFSSYVTPLKFPNLSERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q QVD G+++ E + K L + + N ++VTW + D +V L C +
Sbjct: 64 KSFLHISQQQVDKGLSIFELI----KKLAEFNMENVETTIVTWGNMDMKV-LRHNCLMAG 118
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + ++L + + + FGD + L +AV+ G GR H LDDA+ + +
Sbjct: 119 VDFP-FHGAELDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGRHHRALDDAMTTYNIFKL 177
Query: 179 I 179
+
Sbjct: 178 V 178
>gi|423485063|ref|ZP_17461752.1| hypothetical protein IEQ_04840 [Bacillus cereus BAG6X1-2]
gi|401136463|gb|EJQ44053.1| hypothetical protein IEQ_04840 [Bacillus cereus BAG6X1-2]
Length = 207
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E ++++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYESHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFHELV-----EKLAEYEKRCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ + +
Sbjct: 117 VEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|295707016|ref|YP_003600091.1| exonuclease [Bacillus megaterium DSM 319]
gi|384044497|ref|YP_005492514.1| exonuclease RNase T and DNA polymerase III [Bacillus megaterium
WSH-002]
gi|294804675|gb|ADF41741.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium DSM
319]
gi|345442188|gb|AEN87205.1| Exonuclease RNase T and DNA polymerase III [Bacillus megaterium
WSH-002]
Length = 204
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T + + P+ EIIE V V + EII F +YV+PT LT+ C
Sbjct: 7 YLFIDFEFTMPEYKGF-PKGFFPEIIEVGLVFVK--NQEIIDRFSSYVQPTHFTKLTERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I+Q+QV+ GITL ++ + ++G+ N +++TW + D +V+ + C+ K
Sbjct: 64 KSFLHIEQNQVNEGITL-------EQLVQRLGMYK-NSTIITWGNMDMKVLRQC-CQKNK 114
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + + I+L + + + FGD + L +AV+ G G+ HC LDDA+ + +
Sbjct: 115 VPFP-FTGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDAMTTLNIFKL 173
Query: 179 IMR 181
+ +
Sbjct: 174 VEK 176
>gi|359783297|ref|ZP_09286512.1| exonuclease [Pseudomonas psychrotolerans L19]
gi|359368724|gb|EHK69300.1| exonuclease [Pseudomonas psychrotolerans L19]
Length = 183
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 1 FEYYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++++V+D EAT D+ L EIIE +V+V G+ + +Q++V+P PLLT FC
Sbjct: 1 MKHWLVLDLEATTDEGGWPLELMEIIEIGAVMVD-AEGQELGRYQSFVQPRRLPLLTPFC 59
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIK 118
++LT I Q VD L + WL G T + +W D+D + +LE R
Sbjct: 60 RDLTHISQADVDGAEPLESTWPAFEAWL---GAYETTLAGWCSWGDFD-RRLLERAWREH 115
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ NL+ F+K G R L A+E AGL + G +H DA N A+LL
Sbjct: 116 DLHTHLARVPHRNLKQAFAKARGLARPLGLTAALESAGLAFTGVLHRAETDARNTAKLLP 175
Query: 178 VIM 180
+
Sbjct: 176 ASL 178
>gi|149183042|ref|ZP_01861496.1| sporulation inhibitor KapD [Bacillus sp. SG-1]
gi|148849272|gb|EDL63468.1| sporulation inhibitor KapD [Bacillus sp. SG-1]
Length = 214
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
V+IDFE + ER +P+ EIIE V V +G+I F TYV+P+ P+LT CK
Sbjct: 16 VIIDFEFSM-PERQQNPRGFYPEIIETGLVAVQ--NGKITDKFSTYVKPSAFPVLTKRCK 72
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
+ I Q VDNGI + ++L ++ N ++TW + D +V L + C I
Sbjct: 73 QFLSISQSDVDNGIPFHSLI----QYLNEINRRGKN-KIITWGNMDMKV-LRNNCNKAGI 126
Query: 121 QKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + ++I+L + + + FGD + L +AV+ G G+ H LDDA+ + ++
Sbjct: 127 DFP-FTGEFIDLSMEYKRFFGDQNQTGLWKAVQEYGREGVGKHHKALDDALTTYHIFKLV 185
Query: 180 MR 181
+
Sbjct: 186 EK 187
>gi|356517082|ref|XP_003527219.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Glycine max]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
++++V+D E EI+EFP +++S + ++ F +VRP+ E + ++
Sbjct: 91 LDFFLVLDLEGRV---------EILEFPVLMISAKTLQVEDIFHRFVRPSKMSERRINEY 141
Query: 59 CKELTG-IQQHQV--DNGITLGEALYFHDKWLLQ----MGLNNTNFSVVTWSDWDCQVML 111
+ G H+V D I + + WL++ MG + VT +WD + +
Sbjct: 142 VEGKYGKFGVHRVWHDTAIPFTDVIQQFGTWLMRHQLWMGEKLIRAAFVTCGNWDLKTKV 201
Query: 112 ESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
+C + KI+ P YF +WINL+ + + + ++ + G H G+DD N
Sbjct: 202 PQQCEVSKIELPPYFMEWINLKDVYLNFYDRRATGMVTMMKELQIPMVGSHHLGIDDTRN 261
Query: 172 IARLLSVIMRRGFKFSITKSLTPQA 196
IAR+L ++ G IT P++
Sbjct: 262 IARVLQHMLLDGALVQITARRNPRS 286
>gi|302142955|emb|CBI20250.3| unnamed protein product [Vitis vinifera]
Length = 256
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
++++V+D E EI+EFP ++++ + +++ F +VRP+ E + ++
Sbjct: 45 LDFFLVLDLEGKI---------EILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEY 95
Query: 59 CKEL---TGIQQHQVDNGITLGEALYFHDKWLLQ-------MGLNNTNFSVVTWSDWDCQ 108
+ G+ + D I E + + WL Q MG + VT +WD +
Sbjct: 96 IEGKYGKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLK 155
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +C++ K++ P YF +WINL+ + + + ++ + G H G+DD
Sbjct: 156 TKVPQQCKVSKMKLPPYFMEWINLKDVYLNFYKRRATGMMTMMKELQIPLLGSHHLGIDD 215
Query: 169 AINIARLLSVIMRRGFKFSITKSLTPQANPNC 200
NIAR+L ++ G IT + N
Sbjct: 216 TKNIARVLQRMLADGALLQITARRNADSPENV 247
>gi|392393927|ref|YP_006430529.1| exonuclease [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525005|gb|AFM00736.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 211
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 4 YVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIA--CFQTYVRPTFEPLLTD 57
++V+DFE + K R P EIIE ++V+ +G+++ F +V+P F P L +
Sbjct: 3 FLVVDFEFSVPRSYGKPRAWFP-EIIEVGAIVLDP-NGKLLVDKTFNAFVKPRFWPRLAE 60
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+TGI+Q VD GI L EA+ K +L + ++V W D D ++ L S C
Sbjct: 61 ESYGITGIRQEDVDQGIPLEEAIRHLQKLVL-----HQETTIVAWGDADRKI-LGSVCEK 114
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P ++ +I+L + D +LK A+E + G +H LDDAIN A+++
Sbjct: 115 YGLKYPFIWDNYIDLAEQYKHYRSLDHLISLKRAIEENAIEQIGILHSALDDAINAAQVM 174
Query: 177 SVIMRRGFKFSITK 190
+ IM G+ ++
Sbjct: 175 AKIMSEGWAVKTSE 188
>gi|328863733|gb|EGG12832.1| hypothetical protein MELLADRAFT_114944 [Melampsora larici-populina
98AG31]
Length = 321
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 38/217 (17%)
Query: 1 FEYYVVIDFEATC--------DKERNL--------HPQEIIEFPSVVVS--GVSGEI--- 39
F ++ +D E+TC D NL +P EIIE+P +++ SG
Sbjct: 62 FHSFLCLDVESTCINSNQRHLDNPHNLNEYQLAWMYPNEIIEWPVILMQWRHCSGRWELY 121
Query: 40 -IACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY-FHDKWLLQMGLNNT-N 96
+ ++++V+PT+ P +++FC +LTGI Q DN TL L F ++ + L N
Sbjct: 122 EVDRYRSFVKPTWRPEISEFCTQLTGITQQDTDNAPTLPAMLKDFQINFIERHQLFTVHN 181
Query: 97 FSV-VTWSDWDCQVMLESE---CRIKKIQKPAYFN---QWINLRVPFSKVFGDVRC---- 145
SV VT WD + ++K+ Q P+Y I++R V C
Sbjct: 182 RSVWVTDGPWDLRDHWIKSIFLSKLKRYQIPSYLQSPIHMIDMRYLLQAFIPKVYCIRPP 241
Query: 146 ---NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+L E++++ GL ++G+ H G+DDA N++RLLS +
Sbjct: 242 TSLSLNESLKIFGLEFEGQEHSGIDDAANLSRLLSKL 278
>gi|163942626|ref|YP_001647510.1| sporulation inhibitor KapD [Bacillus weihenstephanensis KBAB4]
gi|229014099|ref|ZP_04171221.1| Sporulation inhibitor KapD [Bacillus mycoides DSM 2048]
gi|229135740|ref|ZP_04264512.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST196]
gi|423490070|ref|ZP_17466752.1| hypothetical protein IEU_04693 [Bacillus cereus BtB2-4]
gi|423495794|ref|ZP_17472438.1| hypothetical protein IEW_04692 [Bacillus cereus CER057]
gi|423497412|ref|ZP_17474029.1| hypothetical protein IEY_00639 [Bacillus cereus CER074]
gi|423519592|ref|ZP_17496073.1| hypothetical protein IG7_04662 [Bacillus cereus HuA2-4]
gi|423597802|ref|ZP_17573802.1| hypothetical protein III_00604 [Bacillus cereus VD078]
gi|423660249|ref|ZP_17635418.1| hypothetical protein IKM_00646 [Bacillus cereus VDM022]
gi|423670473|ref|ZP_17645502.1| hypothetical protein IKO_04170 [Bacillus cereus VDM034]
gi|423673320|ref|ZP_17648259.1| hypothetical protein IKS_00863 [Bacillus cereus VDM062]
gi|163864823|gb|ABY45882.1| Exonuclease RNase T and DNA polymerase III [Bacillus
weihenstephanensis KBAB4]
gi|228647706|gb|EEL03769.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST196]
gi|228747207|gb|EEL97088.1| Sporulation inhibitor KapD [Bacillus mycoides DSM 2048]
gi|401149630|gb|EJQ57097.1| hypothetical protein IEW_04692 [Bacillus cereus CER057]
gi|401157733|gb|EJQ65129.1| hypothetical protein IG7_04662 [Bacillus cereus HuA2-4]
gi|401163132|gb|EJQ70485.1| hypothetical protein IEY_00639 [Bacillus cereus CER074]
gi|401239334|gb|EJR45766.1| hypothetical protein III_00604 [Bacillus cereus VD078]
gi|401296159|gb|EJS01779.1| hypothetical protein IKO_04170 [Bacillus cereus VDM034]
gi|401303910|gb|EJS09471.1| hypothetical protein IKM_00646 [Bacillus cereus VDM022]
gi|401310948|gb|EJS16257.1| hypothetical protein IKS_00863 [Bacillus cereus VDM062]
gi|402429749|gb|EJV61831.1| hypothetical protein IEU_04693 [Bacillus cereus BtB2-4]
Length = 207
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +++RP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHIRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K + ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFHELVEKLAEYEK--------SGKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MAGVEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|449456609|ref|XP_004146041.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
gi|449510343|ref|XP_004163638.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
Length = 325
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDF 58
F+Y++V+D E EIIEFP ++V+ + + F +VRP+ E + ++
Sbjct: 115 FDYFLVLDLEGKV---------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEY 165
Query: 59 CKELTG---IQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF-------SVVTWSDWDCQ 108
+ G + + D I + + + WL+Q L + VT +WD +
Sbjct: 166 IEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIK 225
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNL--KEAVELAGLIWQ------G 160
+ +C + K++ P YF +WIN++ DV N K+A +A ++ Q G
Sbjct: 226 TQVPHQCSVSKMKLPDYFMEWINIK--------DVYLNFYTKKATGMATMMRQLEMPLVG 277
Query: 161 RVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQA 196
H G+DD NI R+L ++ G +T P++
Sbjct: 278 SHHLGIDDTKNIVRVLQRMVGDGAHLQVTARRNPKS 313
>gi|423451797|ref|ZP_17428650.1| hypothetical protein IEE_00541 [Bacillus cereus BAG5X1-1]
gi|423471094|ref|ZP_17447838.1| hypothetical protein IEM_02400 [Bacillus cereus BAG6O-2]
gi|423557522|ref|ZP_17533825.1| hypothetical protein II3_02727 [Bacillus cereus MC67]
gi|401144001|gb|EJQ51534.1| hypothetical protein IEE_00541 [Bacillus cereus BAG5X1-1]
gi|401192928|gb|EJQ99936.1| hypothetical protein II3_02727 [Bacillus cereus MC67]
gi|402432574|gb|EJV64630.1| hypothetical protein IEM_02400 [Bacillus cereus BAG6O-2]
Length = 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +++RP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHIRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L + ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFHELV-----EKLAEYEKSCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ + +
Sbjct: 117 VEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|229169634|ref|ZP_04297336.1| Sporulation inhibitor KapD [Bacillus cereus AH621]
gi|423368914|ref|ZP_17346345.1| hypothetical protein IC3_04014 [Bacillus cereus VD142]
gi|423595881|ref|ZP_17571911.1| hypothetical protein IIG_04748 [Bacillus cereus VD048]
gi|228613830|gb|EEK70953.1| Sporulation inhibitor KapD [Bacillus cereus AH621]
gi|401079028|gb|EJP87332.1| hypothetical protein IC3_04014 [Bacillus cereus VD142]
gi|401221775|gb|EJR28389.1| hypothetical protein IIG_04748 [Bacillus cereus VD048]
Length = 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +++RP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHIRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L + ++VTW + D +V L+ C +
Sbjct: 63 KKFLGIKQEVVDKGISFHELV-----EKLAEYEKSCKPTIVTWGNMDMKV-LKHNCEMAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ + +
Sbjct: 117 VEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|255564549|ref|XP_002523270.1| exonuclease, putative [Ricinus communis]
gi|223537483|gb|EEF39109.1| exonuclease, putative [Ricinus communis]
Length = 329
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 33/225 (14%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
FE+++V D E EI+EFP +++ + + F +VRP+ E + ++
Sbjct: 117 FEFFLVFDLEGKV---------EILEFPVLIIDAKTMAFVDLFHRFVRPSAMSEQRINEY 167
Query: 59 CKELTG---IQQHQVDNGITLGEA-------LYFHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
+ G + + D + E L H W + G + + VT +WD +
Sbjct: 168 IENKYGKFGVDRVWHDTALPFNEVIQEFEAWLTHHHLWEKKHGGHLNRAAFVTCGNWDVK 227
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQ------GRV 162
+ +C + KI+ P YF +WINL+ V+ + +EA + ++ Q G
Sbjct: 228 TQIPRQCTVSKIKLPRYFMEWINLK----DVYQNFYNPKQEARGMRTMMQQLKIPMLGSH 283
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSITKSLTPQA--NPNCLTWNR 205
H G+DD N+AR+L ++ G IT P + N N L NR
Sbjct: 284 HLGIDDTKNVARILQRMLADGAVIPITAWRNPDSIGNVNFLYKNR 328
>gi|229163892|ref|ZP_04291832.1| Sporulation inhibitor KapD [Bacillus cereus R309803]
gi|228619513|gb|EEK76399.1| Sporulation inhibitor KapD [Bacillus cereus R309803]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ + P +F Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 MAGVPFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|229062584|ref|ZP_04199894.1| Sporulation inhibitor KapD [Bacillus cereus AH603]
gi|228716687|gb|EEL68383.1| Sporulation inhibitor KapD [Bacillus cereus AH603]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + ++VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSSHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD G++ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGVSFHELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKQNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MAGVEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|294501668|ref|YP_003565368.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium QM
B1551]
gi|294351605|gb|ADE71934.1| exonuclease (sporulation inhibitor KapD) [Bacillus megaterium QM
B1551]
Length = 204
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T + + P+ EIIE V V + EII F +YV+PT LT+ C
Sbjct: 7 YLFIDFEFTMPEYKGF-PKGFFPEIIEVGLVFVK--NQEIIDRFSSYVQPTHFTKLTERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I+Q+QV+ GITL ++ + ++G+ + +++TW + D +V+ + C+ K
Sbjct: 64 KSFLHIEQNQVNEGITL-------EQLVQRLGMYKHS-TIITWGNMDMKVLRQC-CQKNK 114
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + + I+L + + + FGD + L +AV+ G G+ HC LDDA+ + +
Sbjct: 115 VPFP-FAGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDAMTTLNIFKL 173
Query: 179 IMR 181
+ +
Sbjct: 174 VEK 176
>gi|310830415|ref|YP_003965516.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
gi|309249882|gb|ADO59448.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
Length = 193
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y+++D EATC + EIIE +V + +++ FQ +V+P P L++FC +LT
Sbjct: 3 YIIVDLEATCWENDRSKRNEIIEIGAVKLDD-HLNVVSEFQAFVKPKLYPQLSEFCMQLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I+QH VD+ T L W+ +N+ + +W +D + L+S+C + K Q
Sbjct: 62 SIEQHDVDHAATFETVLEDFQSWM------GSNYWLCSWGYYD-KKQLKSDCDLHK-QPT 113
Query: 124 AYFNQWINLRVPFSKVFGDVRCN----------------LKEAVELAGLIWQGRVHCGLD 167
++ I+++ + + N +++A+++ + +G H G+D
Sbjct: 114 SWLRNHISIKHQHGAILKEKLENAGASKSEVKRVEHGVGMEKALKILKIPLEGTHHRGID 173
Query: 168 DAINIARLLSVI 179
DA NIA++ I
Sbjct: 174 DARNIAKIFVAI 185
>gi|419719052|ref|ZP_14246344.1| exonuclease [Lachnoanaerobaculum saburreum F0468]
gi|383304803|gb|EIC96196.1| exonuclease [Lachnoanaerobaculum saburreum F0468]
Length = 220
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 4 YVVIDFEATC--DKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++V+D E K +NL E IE ++++ EI + F+TYV+P + +
Sbjct: 3 HIVVDLEMNSVEKKYKNLDCTMETIEIGAIMLDENYQEI-SSFRTYVKPEYNNRIRPLIS 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI V N EAL W L G+++ + + WS+ D + +L+ E +KK
Sbjct: 62 RLTGITYDMVMNAPKFDEALKMFSNWCL--GVSD-DIKIYAWSENDYKQILK-EISLKKY 117
Query: 121 -----QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
++ Y +W + + F G + + +LK A+++AG+ + GR H LDDA N A+
Sbjct: 118 KSSLDEERVYLTEWHDFQAEFDTKLGFEKQLSLKTALDMAGVDFLGREHSALDDARNTAK 177
Query: 175 LLSVIMRR 182
L ++ R
Sbjct: 178 LFNIFNDR 185
>gi|442610054|ref|ZP_21024779.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441748273|emb|CCQ10841.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 151
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 43 FQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTW 102
F T+++P P LTDFC LT I QH VD+ EA+ KWL N N+ +W
Sbjct: 6 FNTFIQPQRHPKLTDFCTNLTTITQHDVDHAPYYPEAINTFQKWL----GNYDNYLFCSW 61
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGR 161
++D Q E +C + P +N++ FSK+ R + A++LA + G
Sbjct: 62 GEYDKQ-QFEQDCAFHNVPYPIPAPH-LNIKKEFSKIQKVRKRQGMAGALKLAKIPHTGS 119
Query: 162 VHCGLDDAINIARLLSVIMRRGF 184
H G+DDA N+ +L+ +M R F
Sbjct: 120 HHRGIDDANNMIKLMPYVMGRVF 142
>gi|315650719|ref|ZP_07903774.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
gi|315487023|gb|EFU77350.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
Length = 220
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 4 YVVIDFEATC--DKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++V+D E K +NL E IE ++++ EI + F+TYV+P + +
Sbjct: 3 HIVVDLEMNSVEKKYKNLDCTMETIEIGAIMLDENYQEI-SSFRTYVKPEYNNRIRPLIS 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI V N EAL W L G+++ + + WS+ D + +L+ E +KK
Sbjct: 62 RLTGITYDMVMNAPKFDEALKMFSNWCL--GVSD-DIKIYAWSENDYKQILK-EISLKKY 117
Query: 121 -----QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
++ Y +W + + F G + + +LK A+++AG+ + GR H LDDA N A+
Sbjct: 118 KSSLDEERVYLTEWHDFQAEFDTKLGFEKQLSLKTALDMAGVDFLGREHSALDDARNTAK 177
Query: 175 LLSVIMRR 182
L ++ R
Sbjct: 178 LFNIFNDR 185
>gi|51260906|gb|AAH79640.1| Eri3 protein [Mus musculus]
Length = 135
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIKK 119
LTGI Q VD +L + L D+W+ + GL + N VT DWD +VML +C
Sbjct: 1 LTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCHYLG 60
Query: 120 IQKPAYFNQWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ YF QWINL+ +S G + ++ + + L + GR H G+DD NIA +
Sbjct: 61 LPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIANI 117
Query: 176 LSVIMRRGFKFSIT 189
+ + RGF F T
Sbjct: 118 MKTLAYRGFIFKQT 131
>gi|116784275|gb|ABK23281.1| unknown [Picea sitchensis]
Length = 338
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRP--TFEPLLTDFC 59
+Y++V+D E EI+EFP V++ S E + F +VRP E + ++
Sbjct: 130 DYFLVLDLEGKV---------EILEFPVVMIDAHSLEFVDAFHRFVRPIKMSEKRVEEYI 180
Query: 60 KELTG-IQQHQV--DNGITLGEALYFHDKWLLQM------GLNNTNFSVVTWSDWDCQVM 110
G ++ +V D I E L + WL L + VT +WD +
Sbjct: 181 DGKYGKLRLDRVWHDTSIPFAEMLQQFENWLRHHQLWEKGALTLHRAAFVTCGNWDVKTK 240
Query: 111 LESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
+ +C++ I+ P YF +WINL+ + + + ++ + G H G+DDA
Sbjct: 241 IPEQCQVSGIKLPPYFMEWINLKDVYLNFYNHRAAGMMAMLKGLSMPIIGSHHVGIDDAQ 300
Query: 171 NIARLLSVIMRRGFKFSITKSLT 193
NI R+L ++ G IT T
Sbjct: 301 NITRILQRMLVDGALMQITAKRT 323
>gi|373468497|ref|ZP_09559748.1| exonuclease [Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371766152|gb|EHO54421.1| exonuclease [Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 220
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 4 YVVIDFE--ATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++V+D E + +K ++ E IE ++++ EI + F+TYV+P + +
Sbjct: 3 HIVVDLEMNSISNKYKDFDCTMETIEIGAIMLDENYKEI-SSFRTYVKPEYNNRIRPLIS 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI V N EA+ W L G+N+ + + WS+ D + + E +KK
Sbjct: 62 RLTGITYDMVINAPKFDEAMKMFSNWCL--GVND-DIKIYAWSENDYK-QISKEISLKKY 117
Query: 121 Q-----KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ + Y +W + + F K G + + +LK A+++AG+ + GR H LDDA N A+
Sbjct: 118 ELSLDEERVYLTEWHDFQAEFDKELGFEKQLSLKMALDMAGVDFLGREHSALDDARNTAK 177
Query: 175 LLSVIMRR 182
L ++ R
Sbjct: 178 LFNIFNDR 185
>gi|291442316|ref|ZP_06581706.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
gi|291345211|gb|EFE72167.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
Length = 187
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV +GE +A + VRP + + FC ELT
Sbjct: 10 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLRAGERLAKHRLLVRPARSEV-SPFCTELT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q VD G+ EA L + +W D+D + +CR Q P
Sbjct: 69 GLTQADVDQGLPFTEACR-----ALAAKHHTGLIPWASWGDYD-RNQFTRQCRHTGTQYP 122
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ ++ N++ F+ +G R + +A+ +AGL +GR H G DDA NIA L+ ++ R
Sbjct: 123 -FNHRHTNVKAAFTTSYGLRRRPGMAQALTVAGLPLEGRHHRGDDDAWNIAALVLDLVGR 181
Query: 183 G 183
G
Sbjct: 182 G 182
>gi|229020145|ref|ZP_04176921.1| Sporulation inhibitor KapD [Bacillus cereus AH1273]
gi|229026373|ref|ZP_04182730.1| Sporulation inhibitor KapD [Bacillus cereus AH1272]
gi|423388789|ref|ZP_17366015.1| hypothetical protein ICG_00637 [Bacillus cereus BAG1X1-3]
gi|423417166|ref|ZP_17394255.1| hypothetical protein IE3_00638 [Bacillus cereus BAG3X2-1]
gi|228734836|gb|EEL85474.1| Sporulation inhibitor KapD [Bacillus cereus AH1272]
gi|228741154|gb|EEL91376.1| Sporulation inhibitor KapD [Bacillus cereus AH1273]
gi|401108584|gb|EJQ16515.1| hypothetical protein IE3_00638 [Bacillus cereus BAG3X2-1]
gi|401642864|gb|EJS60570.1| hypothetical protein ICG_00637 [Bacillus cereus BAG1X1-3]
Length = 207
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYAAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFHELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P +F Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MAGLEFP-FFGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|261420373|ref|YP_003254055.1| sporulation inhibitor KapD [Geobacillus sp. Y412MC61]
gi|319768041|ref|YP_004133542.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC52]
gi|261376830|gb|ACX79573.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC61]
gi|317112907|gb|ADU95399.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y412MC52]
Length = 206
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ +DFE T E +P EIIE V V V +II F +YV+P P LT+ C
Sbjct: 6 YLFLDFEFTM-PETKTNPNGFCPEIIEVGLVAV--VDDQIIGQFSSYVKPLRFPQLTERC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q Q+D G++ E + LL+ + +V+TW D +V+ E+ C+ +
Sbjct: 63 KSFLNITQEQIDRGMSFYELV-----SLLRQYDRDRPTTVMTWGSMDMKVLREN-CQSAR 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +
Sbjct: 117 VEFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDAFTAYTIFRL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>gi|118384040|ref|XP_001025173.1| exonuclease family protein [Tetrahymena thermophila]
gi|89306940|gb|EAS04928.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 639
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 15/192 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+Y IDFE ++ EIIEFP V+ S EI+ F +YV+P+ +T F
Sbjct: 413 FQYLFFIDFECNFFNKKF----EIIEFPLHVIDVNSKEIVDSFVSYVKPSNN--ITKFIT 466
Query: 61 ELTGIQQHQVDNGITLGEALY----FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
LT I QV N L + L F +K+L ++G++ +V+ D D L +E
Sbjct: 467 RLTKITDTQVKNAPILQQVLVNVQNFLEKYL-KVGIDKC--AVIYDCDSDS-TFLFNETS 522
Query: 117 IKKIQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
KKI+ P F ++I L+ F ++ +L + +++ + ++G+ HCG DD++N A++
Sbjct: 523 FKKIKVPPIFEKYICLKSVFPVEIANKAPSSLSQMLQILDMKFEGQKHCGADDSMNQAKV 582
Query: 176 LSVIMRRGFKFS 187
+++ G+ FS
Sbjct: 583 GQKLLQLGYNFS 594
>gi|195621024|gb|ACG32342.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
EY +++D E EI+EFP +++ + E + F +VRPT E T++
Sbjct: 120 LEYLLILDLEGKV---------EILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEY 170
Query: 59 CKELTG---IQQHQVDNGITLGEALY-------FHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
+ G + + D + L H+ W + G + + VT +WD +
Sbjct: 171 IEGKYGKFGVDRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGNWDLK 230
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +C++ KI P YF +WINL+ + + + + L G H G+DD
Sbjct: 231 TKVPEQCKVSKINLPTYFMEWINLKDIYLNFYNRRATGMMTMMRELQLPIVGNHHLGIDD 290
Query: 169 AINIARLLSVIMRRGFKFSIT 189
+ NIAR++ ++ G IT
Sbjct: 291 SKNIARVVQRMLADGAVIQIT 311
>gi|386333198|ref|YP_006029367.1| exonuclease [Ralstonia solanacearum Po82]
gi|334195646|gb|AEG68831.1| exonuclease [Ralstonia solanacearum Po82]
Length = 191
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTG 64
+V+D EATCD E IE +V V+ G ++ FQ + RP P LT FC LT
Sbjct: 5 LVVDLEATCDDNAPTFDMETIEVGAVWVAP-DGAVLDRFQAFSRPLINPRLTPFCSTLTN 63
Query: 65 IQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
I Q VD+ T + EAL Q G + +W WD + + R I
Sbjct: 64 IHQTDVDSAPTFPAVAEALRAFVARYRQPGA-----TWASWGAWDHKQLDRDSAR-HGIT 117
Query: 122 KPAYFNQWINLRVPFSKV--FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P IN + F+K G + +A EL L +G H LDDA+N+ARLL +
Sbjct: 118 PPIDLPH-INAKRLFAKARRIGK-EVGMAKACELVSLQLEGAHHRALDDALNVARLLPWV 175
Query: 180 M 180
+
Sbjct: 176 L 176
>gi|212722758|ref|NP_001131746.1| uncharacterized protein LOC100193112 [Zea mays]
gi|194692414|gb|ACF80291.1| unknown [Zea mays]
gi|413944431|gb|AFW77080.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTF--EPLLTDF 58
EY +++D E EI+EFP +++ + E + F +VRPT E T++
Sbjct: 120 LEYLLILDLEGRV---------EILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEY 170
Query: 59 CKELTG---IQQHQVDNGITLGEALY-------FHDKWLLQMGLNNTNFSVVTWSDWDCQ 108
+ G + + D + L H+ W + G + + VT +WD +
Sbjct: 171 IEGKYGKFGVDRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGNWDLK 230
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDD 168
+ +C++ KI P YF +WINL+ + + + + L G H G+DD
Sbjct: 231 TKVPEQCKVSKINLPTYFMEWINLKDIYLNFYNRRATGMMTMMRELQLPIVGNHHLGIDD 290
Query: 169 AINIARLLSVIMRRGFKFSIT 189
+ NIAR++ ++ G IT
Sbjct: 291 SKNIARVVQRMLADGAVIQIT 311
>gi|374705669|ref|ZP_09712539.1| exonuclease [Pseudomonas sp. S9]
Length = 182
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++VID EAT ++ + I + G I FQ +VRP P LT FC++L
Sbjct: 3 HWLVIDLEATTEEGGWPIEEMEIIEIGASMVNAQGHEIDHFQRFVRPLRRPHLTRFCRDL 62
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD--CQVMLESECRIKKI 120
T I Q VD+ L E ++WL Q + ++ W+ W + LE + R++++
Sbjct: 63 THISQTDVDSAGPLSEIWPHFERWLSQH-----HPRLIGWASWGEYDRRQLEQDWRLQQL 117
Query: 121 QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+NL+ F++ L A++L+G+ + G+ H L DA N ARLL ++
Sbjct: 118 SSHLSTLSHLNLKKSFAQARKLQQPVGLHTALQLSGINFSGQQHRALSDARNTARLLPMV 177
Query: 180 M 180
+
Sbjct: 178 L 178
>gi|118397287|ref|XP_001030977.1| exonuclease family protein [Tetrahymena thermophila]
gi|89285297|gb|EAR83314.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1047
Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 18/193 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+Y VIDFE N EIIEFP VV +++ F +YVRPT L++F K
Sbjct: 198 LDYLFVIDFEC------NQPGSEIIEFPITVVDLKQRKVVDTFHSYVRPTKIKKLSNFIK 251
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC---QVMLESECRI 117
+LTGI+Q VD ++ + + +L + + +++ +DC L +E +
Sbjct: 252 KLTGIKQEDVDASESIETIITRVEAFLSKY--QQSKAAIL----YDCANDAKFLSNEIKN 305
Query: 118 KKIQ-KPAYFNQWINLR--VPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
K++ + +INLR P + G +L A+E+ + ++G+ H G DD+INIAR
Sbjct: 306 KQLNITNKFLLSYINLRNVFPINLTGGIKNISLSHALEVLDMSFEGQKHTGRDDSINIAR 365
Query: 175 LLSVIMRRGFKFS 187
+ ++ F F+
Sbjct: 366 VCMEMINHQFTFT 378
>gi|449547644|gb|EMD38612.1| hypothetical protein CERSUDRAFT_123180 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 61/231 (26%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVV------SGVSG---EIIACFQTYVRPTF 51
++ ++V+D E+TC E+P ++ SG E++ F+++V+PT+
Sbjct: 36 YDAFLVLDVESTC-----------FEWPVCLMCWKKSDSGTPECVLEVVDTFRSFVKPTW 84
Query: 52 EPLLTDFCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSV----VTW---S 103
+P L+ FC TG+ Q VDN T E + FHD +++ GL + N TW
Sbjct: 85 KPTLSQFCVNFTGVTQTDVDNAPTFPEMIKTFHDDFMVHNGLLDPNDDSRKVEYTWCCDG 144
Query: 104 DWDCQVMLESECRIKKIQKPAYF-NQWIN----------------------------LRV 134
+D Q L +C I +I+ P + ++N +R+
Sbjct: 145 HFDIQDFLLKQCFISQIEVPNWMRGDFMNVKELVKGHCTSVAKQAPRITKGRRTITMMRI 204
Query: 135 PFSKVFGDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGF 184
P + N+++ +E+ GL + GR HCG+DD N+AR+L+ + R G
Sbjct: 205 PIPLPYP---FNIEKQLEVLGLGKFDGRKHCGIDDTRNLARILAELARLGI 252
>gi|357516489|ref|XP_003628533.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
gi|355522555|gb|AET03009.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
Length = 308
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDFC 59
++++V+D E EI+EFP + +S + ++ F +VRP+ E + ++
Sbjct: 102 DFFLVLDLEGKV---------EILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRINEYI 152
Query: 60 KEL---TGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTWSDWDCQVMLE 112
+ G+ + D I E + + WL+Q L N + VT +WD + +
Sbjct: 153 EGKYGKIGVDRVWHDTAIPFKEVIEEFEAWLVQQKLWTGGNLDRAAFVTCGNWDLKTKVP 212
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+C + +I+ P YF +WINL+ + + + ++ + G H G+DD NI
Sbjct: 213 QQCEVSRIKVPPYFMEWINLKDIYLNFYNRRATGMVTMMKELQMPLVGSHHLGIDDTKNI 272
Query: 173 ARLLSVIMRRGFKFSITKSLTPQA 196
R+L ++ G IT P++
Sbjct: 273 TRVLQHMLVDGALIQITARRNPKS 296
>gi|256394672|ref|YP_003116236.1| exonuclease RNase T and DNA polymerase III [Catenulispora
acidiphila DSM 44928]
gi|256360898|gb|ACU74395.1| Exonuclease RNase T and DNA polymerase III [Catenulispora
acidiphila DSM 44928]
Length = 188
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC K+ EIIE +V +A Q VRP +++FC LT
Sbjct: 10 VVDVEATCWSGKQPADQVSEIIEIGLTIVDVHKRVRLAKHQIMVRPE-RSTVSEFCTGLT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q QVD G+T EA D+ Q ++ ++ +W D+D + L +C ++ P
Sbjct: 69 GLTQAQVDTGVTFAEAC---DQLRRQHYADSRPWA--SWGDYDRKQFLR-QCDATTVRYP 122
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ + N + F++ G + + A+E+A L +GR HCG DDA NIA L+ +M
Sbjct: 123 -FSSLHTNAKQQFAQANGWTKGVGMHHALEIAQLPLEGRHHCGADDAWNIAALILQLM 179
>gi|297528923|ref|YP_003670198.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp. C56-T3]
gi|297252175|gb|ADI25621.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp. C56-T3]
Length = 206
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ +DFE T E +P EIIE V V V +II F +YV+P P LT+ C
Sbjct: 6 YLFLDFEFTM-PETKTNPNGFCPEIIEVGLVAV--VDDQIIGQFSSYVKPLRFPQLTERC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q Q+D G++ E + LL+ + +V+TW D +V+ E+ C+ +
Sbjct: 63 KSFLNITQEQIDRGMSFYELV-----SLLRQYDRDRPTTVMTWGSMDMKVLREN-CQSAQ 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +
Sbjct: 117 VEFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDAFTAYTIFRL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>gi|229032553|ref|ZP_04188518.1| Sporulation inhibitor KapD [Bacillus cereus AH1271]
gi|228728738|gb|EEL79749.1| Sporulation inhibitor KapD [Bacillus cereus AH1271]
Length = 207
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P + Q +L + + K FG+ + L +A+E G G+ HC LDDA+ +
Sbjct: 114 MARVDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|431793973|ref|YP_007220878.1| exonuclease [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784199|gb|AGA69482.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 209
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 16/194 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVV--SGVSGEIIACFQTYVRPTFEPLLTD 57
++V+DFE + + P+ EIIE ++V+ +G G+ + +V+P F P L D
Sbjct: 3 FLVVDFEFSVPRSYG-KPRAWFSEIIEVGAIVLDQNGKLGD--KTYSAFVKPQFWPRLAD 59
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+TGI+Q VD G++L EA+ LQ + +V W D D +V L S C
Sbjct: 60 ESYGITGIRQEDVDRGVSLEEAISH-----LQELAPQRDSYLVAWGDADRKV-LGSVCEK 113
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P ++ +++L + D +LK A+E G+ G +H LDDAIN A+++
Sbjct: 114 YGLAYPFIWDNYVDLAEEYKAYRSLDRLLSLKRAIEENGIEQIGILHSALDDAINAAQVM 173
Query: 177 SVIMRRGFKFSITK 190
+M G+ I +
Sbjct: 174 GRMMSEGWSAQINE 187
>gi|423400236|ref|ZP_17377409.1| hypothetical protein ICW_00634 [Bacillus cereus BAG2X1-2]
gi|423479058|ref|ZP_17455773.1| hypothetical protein IEO_04516 [Bacillus cereus BAG6X1-1]
gi|401655985|gb|EJS73510.1| hypothetical protein ICW_00634 [Bacillus cereus BAG2X1-2]
gi|402426209|gb|EJV58341.1| hypothetical protein IEO_04516 [Bacillus cereus BAG6X1-1]
Length = 207
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L ++VTW + D +V L+ C + +
Sbjct: 63 KKFLGIKQEVVDKGISFPELV-----EKLAEYERRCKPTIVTWGNMDMKV-LKHNCEMAR 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + K FG+ + L +A+E G G+ HC LDDA+ + +
Sbjct: 117 VDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|217075877|gb|ACJ86298.1| unknown [Medicago truncatula]
Length = 252
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT--FEPLLTDFC 59
++++V+D E EI+EFP + +S + ++ F +VRP+ E + ++
Sbjct: 46 DFFLVLDLEGKV---------EILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRINEYI 96
Query: 60 KEL---TGIQQHQVDNGITLGEALYFHDKWLLQMGL----NNTNFSVVTWSDWDCQVMLE 112
+ G+ + D I E + + WL+Q L N + VT +WD + +
Sbjct: 97 EGKYGKIGVDRVWHDTAIPFKEVIEEFEAWLVQQKLWTGGNLDRAAFVTCGNWDLKTKVP 156
Query: 113 SECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
+C + +I+ P YF +WINL+ + + + ++ + G H G+DD NI
Sbjct: 157 QQCEVSRIKVPPYFMEWINLKDIYLNFYNRRATGMVTMMKELQMPLVGSHHLGIDDPKNI 216
Query: 173 ARLLSVIMRRGFKFSITKSLTPQA 196
R+L ++ G IT P++
Sbjct: 217 TRVLQHMLVDGALIQITARRNPKS 240
>gi|427733803|ref|YP_007053347.1| exonuclease [Rivularia sp. PCC 7116]
gi|427368844|gb|AFY52800.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Rivularia sp. PCC 7116]
Length = 181
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 12/182 (6%)
Query: 3 YYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
Y++++D EATC D EIIE +V+++ + I + +Q +++P P LT FC
Sbjct: 4 YFLIVDVEATCCNDGSIPKEEMEIIEIGAVMLNRSTWAIDSEYQQFIKPVRHPKLTSFCT 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
ELT I Q ++ T E + KW+ N +W ++D + +C +
Sbjct: 64 ELTSITQKNLEPAPTFPEVIPQFKKWIDSYPKN----IFCSWGNYDKNQFI-LDCSFHHL 118
Query: 121 QKPAYFNQWINLRVPFSKVFGD---VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P + + N++ FS ++ D R + +A++ GL +QG H G+DDA NIA ++
Sbjct: 119 PYP-FGTEHRNIKKEFS-LYSDNKKKRFGVMQALQYLGLEFQGTHHRGIDDARNIAAIVK 176
Query: 178 VI 179
I
Sbjct: 177 YI 178
>gi|229175605|ref|ZP_04303114.1| Sporulation inhibitor KapD [Bacillus cereus MM3]
gi|423462291|ref|ZP_17439087.1| hypothetical protein IEI_05430 [Bacillus cereus BAG5X2-1]
gi|228607863|gb|EEK65176.1| Sporulation inhibitor KapD [Bacillus cereus MM3]
gi|401133562|gb|EJQ41191.1| hypothetical protein IEI_05430 [Bacillus cereus BAG5X2-1]
Length = 207
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L ++VTW + D +V L+ C + +
Sbjct: 63 KKFLGIKQEVVDKGISFPELV-----EKLAEYERRCKPTIVTWGNMDMKV-LKHNCEMAR 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + K FG+ + L +A+E G G+ HC LDDA+ + +
Sbjct: 117 VDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKAGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|358059444|dbj|GAA94850.1| hypothetical protein E5Q_01504 [Mixia osmundae IAM 14324]
Length = 349
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGE---------------IIACFQ 44
++ Y+V D EATC D P EIIE P ++ E + A F
Sbjct: 80 YDAYLVCDVEATCEDGAGYTFPNEIIELPITMLRWRKCEPRRTLKKILNEWELYVHAEFH 139
Query: 45 TYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT---NFSVVT 101
TYV+PT+ L+ +C++LTGI Q QVD + EAL W+L G+ +T
Sbjct: 140 TYVQPTWNKTLSKYCEDLTGISQAQVDRAPSWREALKLLSDWVLAHGIQGKGKLKSCFIT 199
Query: 102 WSDWDCQVMLESECRIKKIQKPAYFNQ-WINLRVPFSKVF-----------------GDV 143
WD + + C I + P + +I+LR+ + F
Sbjct: 200 DGPWDLRDFVPKTCWINGVSVPPMMTERYIDLRLCAATYFKIQPKLDSARALRIPHRKPD 259
Query: 144 RCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
R ++ ++ GL ++GR H G D N AR++ G+ T P++ PN
Sbjct: 260 RMDVPSLLDALGLPPFEGRQHSGRADTRNTARVVMGFADIGWILIPTLHELPRSIPN 316
>gi|56421469|ref|YP_148787.1| sporulation inhibitor KapD [Geobacillus kaustophilus HTA426]
gi|375010055|ref|YP_004983688.1| 3'-5' exonuclease kapD [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56381311|dbj|BAD77219.1| inhibition of the KinA pathway to sporulation [Geobacillus
kaustophilus HTA426]
gi|359288904|gb|AEV20588.1| 3'-5' exonuclease kapD [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 206
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ +DFE T E +P EIIE V V V +II F +YV+P P LT+ C
Sbjct: 6 YLFLDFEFTM-PETKTNPNGFCPEIIEVGLVAV--VDDQIIGQFSSYVKPLRFPQLTERC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q Q+D G++ E + LL+ +V+TW D +V+ E+ C+ +
Sbjct: 63 KSFLNITQEQIDRGMSFYELV-----SLLRQYDRERPTTVMTWGSMDMKVLREN-CQSAQ 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
++ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +
Sbjct: 117 VEFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDAFTAYTIFRL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>gi|347449386|gb|AEO93427.1| gp167 [Bacillus phage G]
Length = 377
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
YVV+D EA D EIIE ++ + + + I F+T+V+P + L+ F ++LT
Sbjct: 4 YVVLDLEANND--------EIIEIGAIKLDK-NLKTIGKFRTFVKPLNQIRLSSFIRDLT 54
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I+Q +DN T + +DK+L +G ++ ++TWS+ D + L E KI
Sbjct: 55 KIKQVDIDNAKTFDKV---YDKFLNWVGNDSI---IITWSNTD-KYFLNKEFNRYKITNK 107
Query: 124 AYFNQWINLRVPFSKV-FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
F +++N++ S++ + LK ++ + +G+ H LDDAIN +R++ +
Sbjct: 108 DIFKRFLNIQRRVSQILLSNDEVGLKRVLKKLKIEPRGQFHRALDDAINTSRVMVKLFNL 167
Query: 183 GFKFSITKS 191
+F+ITK+
Sbjct: 168 LGQFNITKN 176
>gi|392567404|gb|EIW60579.1| hypothetical protein TRAVEDRAFT_19224 [Trametes versicolor
FP-101664 SS1]
Length = 258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 52/238 (21%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVS----GVSG------EIIACFQTYVRP 49
++ ++V+D EATC + +P EIIE+P ++ G E++ F+++VRP
Sbjct: 10 YDAFLVLDVEATCVEGAGFDYPNEIIEWPVCLLRWKDRDTKGKAREELEVVDEFRSFVRP 69
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-------MGLNNTNFSVVTW 102
T+ P L+DFC LTGI Q QVD+ E L +L + G F +
Sbjct: 70 TWRPQLSDFCTTLTGITQEQVDHAPPFPEVLEHFRGFLAKHQLIDDATGRRLARFCFCSD 129
Query: 103 SDWDCQVMLESECRIKKIQKPAYF-----------NQW-----------INLRVPFSKVF 140
+D + + I PA+ +W R P S F
Sbjct: 130 GPYDVRDFV--------IAPPAWLTSDVVDVRRVVGEWHASATAGADRSAERRPPQSGAF 181
Query: 141 G---DVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
V ++ + GL ++GR H G+DD NIARL+ + RRG+K + P
Sbjct: 182 PLPRRVTLSIPRQLHALGLEPFEGRPHSGIDDTRNIARLVVELARRGWKLEPNTPINP 239
>gi|312109679|ref|YP_003987995.1| exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y4.1MC1]
gi|336234097|ref|YP_004586713.1| Exonuclease RNase T and DNA polymerase III [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718794|ref|ZP_17692976.1| exonuclease family protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214780|gb|ADP73384.1| Exonuclease RNase T and DNA polymerase III [Geobacillus sp.
Y4.1MC1]
gi|335360952|gb|AEH46632.1| Exonuclease RNase T and DNA polymerase III [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368396|gb|EID45669.1| exonuclease family protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 207
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ +DFE T E + P+ EIIE VVV V+ EI F +YV+PT P+LT+ C
Sbjct: 7 YLFLDFEFTM-PETKMEPKGFFPEIIEVGLVVV--VNDEICDQFSSYVKPTRFPVLTNRC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q Q++ G++ E + K+ + +VVTW D +V+ E+ C+
Sbjct: 64 KSFLNITQEQINQGMSFHELVALLCKY-----DRSCPSTVVTWGSMDMKVLKEN-CKAAN 117
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAI---NIARL 175
+ P + + +L + + FG+ L++A++ G G+ HC LDDA NI RL
Sbjct: 118 LPFP-FTGEHRDLAMEYKLFFGNKNHTGLRKAIQEYGNEGVGKAHCALDDAFTTYNIFRL 176
Query: 176 LS 177
+
Sbjct: 177 VE 178
>gi|89100275|ref|ZP_01173141.1| sporulation inhibitor KapD [Bacillus sp. NRRL B-14911]
gi|89085013|gb|EAR64148.1| sporulation inhibitor KapD [Bacillus sp. NRRL B-14911]
Length = 206
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ IDFE T +K + P EIIE +V V ++G I+ F ++V P P L++ CK
Sbjct: 8 LFIDFEFTMPERNEKFKGFSP-EIIEAGAVSV--LNGAILEQFSSFVAPIHFPELSERCK 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD GI+ + + L QMG NN + +VTW + D +V L C
Sbjct: 65 SFLHISQEQVDKGISFADLIC----RLEQMGGNNAD-EIVTWGNMDMKV-LRQNCSQAGT 118
Query: 121 QKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + ++L + + + FGD + L +AV+ G GR H LDDA+ ++ ++
Sbjct: 119 AFP-FKGKEVDLSMEYKRFFGDQNQTGLWKAVKEYGKEGTGRHHRALDDALTTYKIYQLV 177
Query: 180 MR 181
+
Sbjct: 178 EK 179
>gi|194015759|ref|ZP_03054375.1| exonuclease [Bacillus pumilus ATCC 7061]
gi|194013163|gb|EDW22729.1| exonuclease [Bacillus pumilus ATCC 7061]
Length = 205
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGV----SGEIIACFQTYVRPTFEPLLTDFCK 60
+V+DFE T + HPQ FP ++ +GV S II F +YV+P P LT CK
Sbjct: 7 LVVDFEFTM-PDGKYHPQNF--FPEIIEAGVVKAASETIIDTFSSYVKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
GI Q V++GI+ EA F +K + G + ++TW + D +V L+ C + I
Sbjct: 64 SFLGITQQDVESGISF-EA--FIEKLVSLDG--GEDCEIITWGNMDMKV-LKQNCMLNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + FGD L++A + G G+ H LDDA+ +LL++
Sbjct: 118 AFP-FKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQLLTLF 176
Query: 180 MR 181
+
Sbjct: 177 EK 178
>gi|49480343|ref|YP_038931.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118480004|ref|YP_897155.1| sporulation inhibitor KapD [Bacillus thuringiensis str. Al Hakam]
gi|229094008|ref|ZP_04225095.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-42]
gi|229187151|ref|ZP_04314297.1| Sporulation inhibitor KapD [Bacillus cereus BGSC 6E1]
gi|49331899|gb|AAT62545.1| sporulation inhibitor [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118419229|gb|ABK87648.1| sporulation inhibitor [Bacillus thuringiensis str. Al Hakam]
gi|228596320|gb|EEK53994.1| Sporulation inhibitor KapD [Bacillus cereus BGSC 6E1]
gi|228689392|gb|EEL43208.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-42]
Length = 207
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFLELVEKLAEYEK--------KCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
++ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 KAEVDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|297204442|ref|ZP_06921839.1| exonuclease superfamily protein [Streptomyces sviceus ATCC 29083]
gi|297148690|gb|EFH29078.1| exonuclease superfamily protein [Streptomyces sviceus ATCC 29083]
Length = 189
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 6 VIDFEATC-DKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC H EIIE VV + E + + VRP + +DFC ELT
Sbjct: 12 VVDVEATCWPGSPPPHAISEIIEIGLTVVDLSTAERVERHRILVRPARSEV-SDFCTELT 70
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G++ GEA L + +W D+D + +C K P
Sbjct: 71 GLTQDEVDGGLSFGEACR-----RLASEHASGARPWASWGDYD-RNQFTRQCGATKTPYP 124
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ + N + F++V+G R + +A+ +AGL GR H G DDA NIA L+
Sbjct: 125 -FGRRHTNAKAVFTEVYGLRKRPGMAQALGMAGLSLDGRHHRGEDDAWNIAALV 177
>gi|2257567|dbj|BAA21459.1| pi077 [Schizosaccharomyces pombe]
Length = 231
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 22 QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA-- 79
EIIE P ++ + II F +YVRP+ P L+D+CK LTGIQQ VD +
Sbjct: 19 NEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYCKSLTGIQQCTVDKAPIFSDVLE 78
Query: 80 -----LYFHDKWLLQ-----------MGLNNTNFSVVTWS---DWDCQVMLESECRIKKI 120
L H L+ + T W+ WD L + + K+
Sbjct: 79 ELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFKYDKM 138
Query: 121 QKPAYFN-QWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + ++++R + V+ R N+ +E GL ++G H G+DDA N++R++ +
Sbjct: 139 PIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQFEGSEHRGIDDARNLSRIVKKM 198
Query: 180 MRRGFKFSITK 190
+F +
Sbjct: 199 CSENVEFECNR 209
>gi|30264951|ref|NP_847328.1| sporulation inhibitor KapD [Bacillus anthracis str. Ames]
gi|47530447|ref|YP_021796.1| sporulation inhibitor KapD [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187770|ref|YP_031023.1| sporulation inhibitor KapD [Bacillus anthracis str. Sterne]
gi|65316901|ref|ZP_00389860.1| COG2176: DNA polymerase III, alpha subunit (gram-positive type)
[Bacillus anthracis str. A2012]
gi|165870872|ref|ZP_02215524.1| sporulation inhibitor KapD [Bacillus anthracis str. A0488]
gi|167634919|ref|ZP_02393237.1| sporulation inhibitor KapD [Bacillus anthracis str. A0442]
gi|167639964|ref|ZP_02398232.1| sporulation inhibitor KapD [Bacillus anthracis str. A0193]
gi|170685855|ref|ZP_02877078.1| sporulation inhibitor KapD [Bacillus anthracis str. A0465]
gi|170706941|ref|ZP_02897398.1| sporulation inhibitor KapD [Bacillus anthracis str. A0389]
gi|177652301|ref|ZP_02934804.1| sporulation inhibitor KapD [Bacillus anthracis str. A0174]
gi|190567138|ref|ZP_03020053.1| sporulation inhibitor KapD [Bacillus anthracis str. Tsiankovskii-I]
gi|196033113|ref|ZP_03100526.1| sporulation inhibitor KapD [Bacillus cereus W]
gi|196040448|ref|ZP_03107748.1| sporulation inhibitor KapD [Bacillus cereus NVH0597-99]
gi|196043866|ref|ZP_03111103.1| sporulation inhibitor KapD [Bacillus cereus 03BB108]
gi|218906109|ref|YP_002453943.1| sporulation inhibitor KapD [Bacillus cereus AH820]
gi|225866886|ref|YP_002752264.1| sporulation inhibitor KapD [Bacillus cereus 03BB102]
gi|227817679|ref|YP_002817688.1| sporulation inhibitor KapD [Bacillus anthracis str. CDC 684]
gi|228917539|ref|ZP_04081084.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929937|ref|ZP_04092951.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936199|ref|ZP_04098999.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948633|ref|ZP_04110911.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229124453|ref|ZP_04253640.1| Sporulation inhibitor KapD [Bacillus cereus 95/8201]
gi|229601886|ref|YP_002869154.1| sporulation inhibitor KapD [Bacillus anthracis str. A0248]
gi|254687243|ref|ZP_05151100.1| sporulation inhibitor KapD [Bacillus anthracis str. CNEVA-9066]
gi|254725256|ref|ZP_05187039.1| sporulation inhibitor KapD [Bacillus anthracis str. A1055]
gi|254735420|ref|ZP_05193128.1| sporulation inhibitor KapD [Bacillus anthracis str. Western North
America USA6153]
gi|254740687|ref|ZP_05198378.1| sporulation inhibitor KapD [Bacillus anthracis str. Kruger B]
gi|254753051|ref|ZP_05205087.1| sporulation inhibitor KapD [Bacillus anthracis str. Vollum]
gi|254761393|ref|ZP_05213414.1| sporulation inhibitor KapD [Bacillus anthracis str. Australia 94]
gi|301056400|ref|YP_003794611.1| sporulation inhibitor KapD [Bacillus cereus biovar anthracis str.
CI]
gi|376268819|ref|YP_005121531.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus cereus
F837/76]
gi|386738782|ref|YP_006211963.1| Sporulation inhibitor KapD [Bacillus anthracis str. H9401]
gi|421507858|ref|ZP_15954775.1| sporulation inhibitor KapD [Bacillus anthracis str. UR-1]
gi|421639973|ref|ZP_16080561.1| sporulation inhibitor KapD [Bacillus anthracis str. BF1]
gi|423554614|ref|ZP_17530940.1| hypothetical protein IGW_05244 [Bacillus cereus ISP3191]
gi|30259626|gb|AAP28814.1| sporulation inhibitor KapD [Bacillus anthracis str. Ames]
gi|47505595|gb|AAT34271.1| sporulation inhibitor KapD [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181697|gb|AAT57073.1| sporulation inhibitor KapD [Bacillus anthracis str. Sterne]
gi|164713381|gb|EDR18906.1| sporulation inhibitor KapD [Bacillus anthracis str. A0488]
gi|167512045|gb|EDR87423.1| sporulation inhibitor KapD [Bacillus anthracis str. A0193]
gi|167529669|gb|EDR92418.1| sporulation inhibitor KapD [Bacillus anthracis str. A0442]
gi|170128044|gb|EDS96914.1| sporulation inhibitor KapD [Bacillus anthracis str. A0389]
gi|170670319|gb|EDT21059.1| sporulation inhibitor KapD [Bacillus anthracis str. A0465]
gi|172082307|gb|EDT67373.1| sporulation inhibitor KapD [Bacillus anthracis str. A0174]
gi|190561642|gb|EDV15612.1| sporulation inhibitor KapD [Bacillus anthracis str. Tsiankovskii-I]
gi|195994542|gb|EDX58497.1| sporulation inhibitor KapD [Bacillus cereus W]
gi|196025202|gb|EDX63872.1| sporulation inhibitor KapD [Bacillus cereus 03BB108]
gi|196028580|gb|EDX67187.1| sporulation inhibitor KapD [Bacillus cereus NVH0597-99]
gi|218535783|gb|ACK88181.1| sporulation inhibitor KapD [Bacillus cereus AH820]
gi|225790491|gb|ACO30708.1| sporulation inhibitor KapD [Bacillus cereus 03BB102]
gi|227005614|gb|ACP15357.1| sporulation inhibitor KapD [Bacillus anthracis str. CDC 684]
gi|228659001|gb|EEL14654.1| Sporulation inhibitor KapD [Bacillus cereus 95/8201]
gi|228810940|gb|EEM57283.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823446|gb|EEM69278.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829734|gb|EEM75357.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842106|gb|EEM87208.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266294|gb|ACQ47931.1| sporulation inhibitor KapD [Bacillus anthracis str. A0248]
gi|300378569|gb|ADK07473.1| sporulation inhibitor KapD [Bacillus cereus biovar anthracis str.
CI]
gi|364514619|gb|AEW58018.1| KapD, inhibitor of KinA pathway to sporulation [Bacillus cereus
F837/76]
gi|384388634|gb|AFH86295.1| Sporulation inhibitor KapD [Bacillus anthracis str. H9401]
gi|401180497|gb|EJQ87656.1| hypothetical protein IGW_05244 [Bacillus cereus ISP3191]
gi|401821964|gb|EJT21117.1| sporulation inhibitor KapD [Bacillus anthracis str. UR-1]
gi|403392806|gb|EJY90054.1| sporulation inhibitor KapD [Bacillus anthracis str. BF1]
Length = 207
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI+Q VD GI+ E + L ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFSELV-----EKLAEYEKRCKPTIVTWGNMDMKV-LKHNCEKAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 VDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|118346813|ref|XP_977115.1| exonuclease family protein [Tetrahymena thermophila]
gi|89288652|gb|EAR86640.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1363
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 6 VIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGI 65
VIDFE N EIIEFP +V+ II F TYV+PT P + + ++TGI
Sbjct: 710 VIDFEC------NQPGYEIIEFPVLVIDLKKERIIDTFHTYVKPTTFPKINPYISKITGI 763
Query: 66 QQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAY 125
QQ V N + + + + +L + + ++ D DC M I
Sbjct: 764 QQKDVANAPSFVQVIQKVEAFLQKY--KDYEGCILYDCDSDCNYMKSEFINKNYIPTSDV 821
Query: 126 FNQWINLR--VPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRG 183
F +INLR P G + +L A ++ + +QG H G+DDA N A + +++RG
Sbjct: 822 FFSYINLRNVFPLEISGGVINKSLSHAQQVLQMEFQGCKHKGIDDARNQALVCIELVKRG 881
Query: 184 FKFSITKSLTPQ---ANPNCLTWN 204
+ F+ + PQ +P C N
Sbjct: 882 YSFT-QFMIQPQFLKQDPKCCVKN 904
>gi|145514788|ref|XP_001443299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410677|emb|CAK75902.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F ++ D + +C + R + QEIIE + V +I+ FQ Y++P P++++FC
Sbjct: 242 FTNLILFDIQVSCIEDNRQNYNQEIIEISAKVYDIDQRKIVRNFQKYIKPVDNPIISEFC 301
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+ TGI+Q Q++NGI+L +A+ ++G F ++T D+D ++L+ E + K
Sbjct: 302 TKQTGIKQFQINNGISLQQAINQLTDIFKELG----RFCIITKGDFDL-LILKKEAQRKN 356
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCNLK-----EAVELAGLI 157
I+ F +IN++ F K + +LK E +E GL+
Sbjct: 357 IKLVRNFTYYINIKKVFPKSLRS-KTSLKDPSMTEMLECCGLL 398
>gi|403164922|ref|XP_003324981.2| hypothetical protein PGTG_06518 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165456|gb|EFP80562.2| hypothetical protein PGTG_06518 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 45/228 (19%)
Query: 1 FEYYVVIDFEATC----------------DKERNLHPQEIIEFPSVVVSGVSGEI----- 39
F ++ IDFE+TC D+ L+P EIIE+P +++ + +
Sbjct: 50 FHSFLCIDFESTCINADDPSLNNPTRLSKDQLTWLYPNEIIEWPVILLQWRTAQDGNWEL 109
Query: 40 --IACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY-FHDKWLLQMGLNNTN 96
++ +VRP + P+L+ FC +LTGI Q +VD +TL L F ++ L T+
Sbjct: 110 YEAGRYRRFVRPVWRPILSQFCIDLTGISQDEVDQAMTLDLVLRDFDQNFVKPHKLFTTD 169
Query: 97 FSVVTWSD--WDCQ---------VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDV-- 143
+ +D WD + ++ C + ++ P I+LR +V
Sbjct: 170 NQTIWVTDGPWDFRDHFVKSTFLARIDVNCLPRYLRSPISL---IDLRYLLKAFIPNVCP 226
Query: 144 -----RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKF 186
+L A+ GL ++G+ H G+DDA N+ RLL+ ++R F
Sbjct: 227 FPPPASLSLFNAMAAFGLEFEGQQHSGIDDAHNVGRLLAEMVRCSIPF 274
>gi|332667991|ref|YP_004450779.1| Exonuclease RNase T and DNA polymerase III [Haliscomenobacter
hydrossis DSM 1100]
gi|332336805|gb|AEE53906.1| Exonuclease RNase T and DNA polymerase III [Haliscomenobacter
hydrossis DSM 1100]
Length = 180
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 4 YVVIDFEATCDKERNLHP-QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++ D EATC + R QE+IE +V+++G GE+ A F VRP P L+ +C+EL
Sbjct: 3 FIIFDLEATCWEGRPPSKVQEVIEIGAVLMNGY-GEVEAEFSRMVRPILNPRLSAYCQEL 61
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
T I+Q +VD + W L + + ++ + +W D +++L+ +C++ I+
Sbjct: 62 TNIKQTEVDRASIFPVVVESFQDWGLML---DEDYILCSWGGMDKKLLLQ-DCQLHDIE- 116
Query: 123 PAYFNQWINLRVPFSKVFGDVR-----CNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
++W++ + + +++ L+ +VE G + G H L DA N+A++
Sbjct: 117 ----DEWVDAHINIKHQYMELKRMRRPKGLRASVEAEGFDFTGPQHRALADAQNLAKI 170
>gi|226314204|ref|YP_002774100.1| hypothetical protein BBR47_46190 [Brevibacillus brevis NBRC 100599]
gi|226097154|dbj|BAH45596.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 239
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
+V D E T +R+ P EIIE + VV G +G + FQ Y P E +++ ++
Sbjct: 4 IVFDLETTLTYQRDKIP-EIIEIGAAKVVPGKNGVEVDTFQRYTFPAIERRISERTRKFI 62
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ + + I A KW+ N++ + + TW D ++M+E R
Sbjct: 63 GLDKENMPTFIPFRRAFAEFLKWIG----NDSEYYLCTWGQDDKRLMIEHCARFG--LDF 116
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + +++ P S + D + +LKEA++ AG+I +GR+H L DAI+ A LL
Sbjct: 117 NWMRNYNDIQPPISLLLADRKQMSLKEAIDTAGIIQEGRLHSALVDAIHTAHLL------ 170
Query: 183 GFKFSIT---KSLTPQANPN 199
K++ T K TP+ N N
Sbjct: 171 -IKYNKTVHLKENTPEENYN 189
>gi|402225629|gb|EJU05690.1| hypothetical protein DACRYDRAFT_75019 [Dacryopinax sp. DJM-731 SS1]
Length = 497
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 66/252 (26%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVVS----GVSGEI-----IACFQTYVRPT 50
++ ++++D EATCD+ +P EIIE+P V++ SG + A F+++VRPT
Sbjct: 146 YDAFLLLDVEATCDEGVGFDYPNEIIEWPVVLMRWNEMDTSGRMASLTPFAEFRSFVRPT 205
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWS 103
+ LT FC LTGI Q ++N T E L ++L+ GL + ++ VT
Sbjct: 206 WATQLTPFCTSLTGITQSHINNAPTFPEVLAQFREFLVLHGLLDPETDEQLVRYTFVTDG 265
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLK--------------- 148
WD + L +C + I PA+ Q + V VR L+
Sbjct: 266 PWDLRDFLVKQCWLSDIPVPAWVGQEV------VDVRQLVRVALRTFDETDPDTEPEPEP 319
Query: 149 ----------------EAVELAGLIWQGRVH------------CGLDDAINIARLLSVIM 180
+ GL ++H G+DDA N+AR+L +
Sbjct: 320 EPEPAQPEGEPERERERGTKHTGLSLPCQLHNLSLPPFQGRQHSGIDDARNVARVLQELA 379
Query: 181 RRGFKFSITKSL 192
RRG+ SL
Sbjct: 380 RRGWVVERNSSL 391
>gi|47566945|ref|ZP_00237662.1| exonuclease KapD [Bacillus cereus G9241]
gi|52140617|ref|YP_086215.1| sporulation inhibitor KapD [Bacillus cereus E33L]
gi|229158512|ref|ZP_04286572.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 4342]
gi|47556263|gb|EAL14597.1| exonuclease KapD [Bacillus cereus G9241]
gi|51974086|gb|AAU15636.1| sporulation inhibitor [Bacillus cereus E33L]
gi|228624948|gb|EEK81715.1| Sporulation inhibitor KapD [Bacillus cereus ATCC 4342]
Length = 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 KAGVDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|120553343|ref|YP_957694.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120323192|gb|ABM17507.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 201
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 5 VVIDFEATC-------DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+V+D E+TC K +++ EIIE ++ G+++ V+PT P L+D
Sbjct: 9 LVVDLESTCWEDLNPEGKRQDVDSMEIIEI-GCALATRDGQLLKSASFLVKPTRFPQLSD 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
FC LTGI Q VD T EA+ +KWL ++ + F +W ++D + +E++ +
Sbjct: 68 FCTALTGITQSMVDEAPTYPEAIEALNKWLGEL---SDEFIWCSWGNYD-RRHVEAQNQQ 123
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ +NL+ + + G + N L A+ L ++G H G+DDA NI RLL
Sbjct: 124 TGSRPAMSRYPHLNLKRIWRRTTGQKQKNGLANALAFHDLTFEGSHHRGVDDARNIVRLL 183
>gi|228988155|ref|ZP_04148253.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771566|gb|EEM20034.1| Sporulation inhibitor KapD [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 KAGVDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|389573727|ref|ZP_10163799.1| sporulation inhibitor KapD [Bacillus sp. M 2-6]
gi|388426580|gb|EIL84393.1| sporulation inhibitor KapD [Bacillus sp. M 2-6]
Length = 205
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGV---SGE-IIACFQTYVRPTFEPLLTDFCK 60
+V+DFE T + HPQ FP ++ +GV S E II F +YV+P P LT CK
Sbjct: 7 LVVDFEFTM-PDGKYHPQNF--FPEIIEAGVVKASNETIIDTFSSYVKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
GI Q V++GI+ EA F +K + G + ++TW + D +V L+ C + I
Sbjct: 64 SFLGITQQDVESGISF-EA--FIEKLVSLDG--GEDCEIITWGNMDMKV-LKQNCMLNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P NQ +L + FGD L++A + G G+ H LDDA+ +L ++
Sbjct: 118 GFPFKGNQR-DLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQLFTLF 176
Query: 180 MR 181
+
Sbjct: 177 EK 178
>gi|158339338|ref|YP_001520515.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158309579|gb|ABW31196.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 159
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++YY+++D EATC ++ H + E IE +V++ V EII F +++P P LTDF
Sbjct: 8 YDYYLIVDLEATCCNTFSIPHKETETIEIGAVIIESVGLEIIDEFTVFIKPIRHPNLTDF 67
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C ELT I+Q +++ T +A+ +W Q N +W D+D + LE E +
Sbjct: 68 CTELTTIKQTDLEDAPTFPQAVGTFKRWFEQY----ENSVFCSWGDYD-KNQLERESKYH 122
Query: 119 KIQKPAYFNQWINLRVPFS 137
KI P + NL+ FS
Sbjct: 123 KIPYPMG-GEHFNLKKQFS 140
>gi|397171384|ref|ZP_10494792.1| EXOIII family exonuclease [Alishewanella aestuarii B11]
gi|396087023|gb|EJI84625.1| EXOIII family exonuclease [Alishewanella aestuarii B11]
Length = 185
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 2 EYYVVIDFEATC--------DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEP 53
++ +++D EATC ++ + + E+IEF VV+ G+++ VRP P
Sbjct: 3 KHLLIVDLEATCWDGDVPSLNRRQTVEDMEVIEF-GCVVAEPDGKLLDAKSFIVRPVLRP 61
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLES 113
L+ FC +LTGI Q QV E + D WL F +W D+D + L +
Sbjct: 62 QLSSFCTQLTGISQQQVAVAPVYAEVVKVIDAWLAAY----QPFCWASWGDYD-RHQLGA 116
Query: 114 ECRIKKIQKPAYFN-QWINLRVPFSK-VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAIN 171
E R +PA+ + NL+ + + R L+ A+ L ++G+ H G+DDA N
Sbjct: 117 E-RQHNGCEPAFMALEHKNLKQLWREGRAAKRRSGLQAALAFHNLAFEGQHHRGIDDARN 175
Query: 172 IARLLSVI 179
+ARLL I
Sbjct: 176 MARLLPWI 183
>gi|398308084|ref|ZP_10511558.1| sporulation inhibitor KapD [Bacillus mojavensis RO-H-1]
Length = 205
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E PQ EIIE + +V V+GE++ F +Y+RP P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYSPQNFFPEIIE--AGIVKSVNGEVVETFSSYIRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q+QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLNITQNQVDEGMRFEDFI----RKLNELD-PEKNCTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDALTAYKLFKLV 176
>gi|321259047|ref|XP_003194244.1| hypothetical protein CGB_E2360C [Cryptococcus gattii WM276]
gi|317460715|gb|ADV22457.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 593
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV----SGVSG----EIIACFQTYVRPTF 51
+ ++ D EATC + +P EIIEFP V+V G E I F++YVRPT+
Sbjct: 180 YRSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPDEEGKRVLEKIDSFRSYVRPTW 239
Query: 52 EPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWL 87
P+LTDFCK LTGIQQ VD E L ++WL
Sbjct: 240 RPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEEWL 275
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 136 FSKVFGDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
F + GD N+ E GL ++GR H GLDDA NI+R+L + R F + P
Sbjct: 409 FIRKEGDYYLNIAGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQP 468
Query: 195 QANPNCLTW 203
+ W
Sbjct: 469 MGSGKRYPW 477
>gi|331002829|ref|ZP_08326343.1| hypothetical protein HMPREF0491_01205 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413318|gb|EGG92686.1| hypothetical protein HMPREF0491_01205 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 220
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 4 YVVIDFEAT-CDKERNLH--PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++V+D E +K+ + E IE ++++ EI + F+TYV+P + +
Sbjct: 3 HIVVDLEMNGIEKKHRIFGCTMETIEIGAIMLDENYQEI-SSFKTYVKPEYNSKIEKNIS 61
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LTGI + V N EAL W L + + + WS D + + E R+K+
Sbjct: 62 RLTGITNNMVVNAPKFNEALKKFSDWCLAA---DDDIRIYAWSKNDYK-QIAKEIRLKRY 117
Query: 121 -----QKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
+ Y N+W + + F G + + +LK A+++AG+ + GR H LDDA N A+
Sbjct: 118 DIRPEESMVYLNEWNDFQEEFDTELGFERQISLKLALDMAGIDFLGREHSALDDARNTAK 177
Query: 175 LLSVIM-RRGFKFSITK---SLTP 194
L + R F ++ K ++TP
Sbjct: 178 LFHIFRDREMFDMTLKKIEEAMTP 201
>gi|357394314|ref|YP_004909155.1| hypothetical protein KSE_74440 [Kitasatospora setae KM-6054]
gi|311900791|dbj|BAJ33199.1| hypothetical protein KSE_74440 [Kitasatospora setae KM-6054]
Length = 192
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 6 VIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + + Q EIIE VV S + + VRP + + FC ELT
Sbjct: 12 VVDVEATCWEGQPPPGQVSEIIEIGLTVVDLASLARVGRHRVLVRPRRSSV-SGFCTELT 70
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ +V G+ EA LL +W D+D ++ +CR P
Sbjct: 71 GLTAREVAGGLPFDEACR-----LLAAEHRAGERPWASWGDYD-RLQFTRQCRAAGTAYP 124
Query: 124 AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + N + F++ G R + A+ELAGL +GR H G DDA NIA L+ + R
Sbjct: 125 -FGRRHTNAKAVFTEARGLPKRPGMARALELAGLPLEGRHHSGADDAWNIAALVLTLARS 183
Query: 183 G 183
G
Sbjct: 184 G 184
>gi|302767084|ref|XP_002966962.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
gi|300164953|gb|EFJ31561.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
Length = 315
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ ++V+D E EI+EFP V++ + ++ F +VRP E +
Sbjct: 103 FDKFLVLDLEGKV---------EILEFPVVLLDAKTLTVVDRFHRFVRPC-ELKGSRLQA 152
Query: 61 ELTG------IQQHQVDNGITLGEALYFHDKWLLQMGLNN------TNFSVVTWSDWDCQ 108
+ G +++ D I E L + WL Q L + N + VT +WD +
Sbjct: 153 YIAGKYGRWKLERLWEDTAIPFQETLLAFEDWLEQHSLRDPESHLLKNSAFVTCGNWDIK 212
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIW------QGRV 162
+ +C I P+YF +WINL+ F + +A + ++ QG
Sbjct: 213 TKIPEQCITSGIPLPSYFCEWINLKDIFLNFYNKRARAKSKAPGMLSMMRSLDMRVQGSH 272
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSIT 189
H GLDDA NIAR++ + G SIT
Sbjct: 273 HLGLDDAHNIARIVQKMESDGAVLSIT 299
>gi|302755252|ref|XP_002961050.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
gi|300171989|gb|EFJ38589.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
Length = 261
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
F+ ++V+D E EI+EFP V++ + ++ F +VRP E +
Sbjct: 49 FDKFLVLDLEGKV---------EILEFPVVLLDAKTLTVVDRFHRFVRPC-ELKGSRLQA 98
Query: 61 ELTG------IQQHQVDNGITLGEALYFHDKWLLQMGLNN------TNFSVVTWSDWDCQ 108
+ G +++ D I E L + WL Q L + N + VT +WD +
Sbjct: 99 YIAGKYGRWKLERLWEDTAIPFQETLLAFEDWLEQHSLRDPESHLLKNSAFVTCGNWDIK 158
Query: 109 VMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIW------QGRV 162
+ +C I P+YF +WINL+ F + +A + ++ QG
Sbjct: 159 TKIPEQCITSGIPLPSYFCEWINLKDIFLNFYNKRARAKSKAPGMLSMMRSLDMRVQGSH 218
Query: 163 HCGLDDAINIARLLSVIMRRGFKFSIT 189
H GLDDA NIAR++ + G SIT
Sbjct: 219 HLGLDDAHNIARIIQKMESDGAVLSIT 245
>gi|58267302|ref|XP_570807.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227041|gb|AAW43500.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 602
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV----SGVSG----EIIACFQTYVRPTF 51
+ ++ D EATC + +P EIIEFP V+V G E I F++YVRPT+
Sbjct: 181 YRSFLCFDVEATCRGGKEFDYPNEIIEFPVVLVRWGEPNEEGKRVLEKIDSFRSYVRPTW 240
Query: 52 EPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWL 87
P+LTDFCK LTGIQQ VD E L + WL
Sbjct: 241 RPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEGWL 276
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 141 GDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
GD N+ E GL ++GR H GLDDA NI+R+L + R F + P +
Sbjct: 416 GDYYLNIAGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQPMGSGK 475
Query: 200 CLTW 203
W
Sbjct: 476 RYPW 479
>gi|157693568|ref|YP_001488030.1| sporulation inhibitor KapD [Bacillus pumilus SAFR-032]
gi|157682326|gb|ABV63470.1| exonuclease [Bacillus pumilus SAFR-032]
Length = 206
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGV----SGEIIACFQTYVRPTFEPLLTDFCK 60
+V+DFE T + HPQ FP ++ +GV S II F +YV+P P LT CK
Sbjct: 8 LVVDFEFTM-PDGKYHPQNF--FPEIIEAGVVKAASETIIDTFSSYVKPKKFPKLTKRCK 64
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
GI Q V++GI+ EA F +K + G + ++TW + D +V L+ C + I
Sbjct: 65 SFLGITQQDVESGISF-EA--FIEKLVSLDG--GEDCEIITWGNMDMKV-LKQNCMLNHI 118
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + FGD L++A + G G+ H LDDA+ +L ++
Sbjct: 119 GFP-FKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSEGAGKHHKALDDAMTTYQLFTLF 177
Query: 180 MR 181
+
Sbjct: 178 EK 179
>gi|448239201|ref|YP_007403259.1| putative 3'-5' exonuclease [Geobacillus sp. GHH01]
gi|445208043|gb|AGE23508.1| putative 3'-5' exonuclease [Geobacillus sp. GHH01]
Length = 206
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ +DFE T E +P EIIE V V V +II F +YV+P P LT+ C
Sbjct: 6 YLFLDFEFTM-PETKTNPNGFCPEIIEVGLVAV--VDDQIIGQFSSYVKPLRFPQLTERC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q Q+D G++ E + LL+ +V+TW D +V+ E+ C+ +
Sbjct: 63 KSFLNITQEQIDRGMSFYELV-----SLLRQYDRERPTTVMTWGSMDMKVLREN-CQSAQ 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + + +L + + + FG+ + L++AV+ G G+ HC LDDA + +
Sbjct: 117 EEFP-FTGEHRDLAMEYKRFFGNKNQTALRKAVQEYGNEAVGKAHCALDDAFTAYTIFRL 175
Query: 179 I 179
+
Sbjct: 176 V 176
>gi|313218688|emb|CBY43136.1| unnamed protein product [Oikopleura dioica]
Length = 181
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 32/165 (19%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-------------------------------EIIEFPS 29
F++ +VIDFEA+C P+ EI EFP+
Sbjct: 3 FDFALVIDFEASCYGPGERPPEGWKVLVQNLDCENFLYHFMTFELSFASNNWSEITEFPA 62
Query: 30 VVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ 89
V+V+ + EII+ F +V P P L+DFCK+LT +++ + TL E + + W
Sbjct: 63 VLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKTLEEVMIDFELWTKD 122
Query: 90 MGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRV 134
+ + T DWD L SE + KKI+ P W++LR
Sbjct: 123 VQ-KEHDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKSWVDLRA 166
>gi|56461520|ref|YP_156801.1| EXOIII family exonuclease [Idiomarina loihiensis L2TR]
gi|56180530|gb|AAV83252.1| EXOIII family exonuclease [Idiomarina loihiensis L2TR]
Length = 192
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 4 YVVIDFEATC--------DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLL 55
Y+++D EATC D+++ + EIIEF V+ +G + VRP P L
Sbjct: 12 YLIVDLEATCWDGNVEGLDRKQTVDDMEIIEFGCVIAED-NGTVRDYRSFMVRPQSHPNL 70
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDC--QVMLES 113
++FC +LT I Q VD + D+WL N+ + W W + + +
Sbjct: 71 SEFCTQLTSIAQSDVDAAPVYQSVVPEIDQWL-------KNYKLEGWGSWGNYDKNQISA 123
Query: 114 ECRIKKIQKPAYFN-QWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAIN 171
E R + P +F+ +N++ + + + R +L A++ GL ++G H G+DDA+N
Sbjct: 124 EQRRHNL-APEFFSLSHMNIKQEWRRGKVNSRSADLANAMKYHGLSFEGTHHRGIDDALN 182
Query: 172 IARLL 176
IA LL
Sbjct: 183 IAPLL 187
>gi|42784095|ref|NP_981342.1| sporulation inhibitor KapD [Bacillus cereus ATCC 10987]
gi|206976439|ref|ZP_03237346.1| sporulation inhibitor KapD [Bacillus cereus H3081.97]
gi|217962377|ref|YP_002340949.1| sporulation inhibitor KapD [Bacillus cereus AH187]
gi|222098364|ref|YP_002532422.1| sporulation inhibitor kapd [Bacillus cereus Q1]
gi|229141628|ref|ZP_04270159.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST26]
gi|229199060|ref|ZP_04325743.1| Sporulation inhibitor KapD [Bacillus cereus m1293]
gi|375286900|ref|YP_005107339.1| sporulation inhibitor KapD [Bacillus cereus NC7401]
gi|384182706|ref|YP_005568468.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402554974|ref|YP_006596245.1| sporulation inhibitor KapD [Bacillus cereus FRI-35]
gi|423355376|ref|ZP_17333000.1| hypothetical protein IAU_03449 [Bacillus cereus IS075]
gi|423375516|ref|ZP_17352853.1| hypothetical protein IC5_04569 [Bacillus cereus AND1407]
gi|423571803|ref|ZP_17548041.1| hypothetical protein II7_05017 [Bacillus cereus MSX-A12]
gi|423573411|ref|ZP_17549530.1| hypothetical protein II9_00632 [Bacillus cereus MSX-D12]
gi|423608739|ref|ZP_17584631.1| hypothetical protein IIK_05319 [Bacillus cereus VD102]
gi|42740026|gb|AAS43950.1| sporulation inhibitor KapD [Bacillus cereus ATCC 10987]
gi|206745363|gb|EDZ56763.1| sporulation inhibitor KapD [Bacillus cereus H3081.97]
gi|217065516|gb|ACJ79766.1| sporulation inhibitor KapD [Bacillus cereus AH187]
gi|221242423|gb|ACM15133.1| sporulation inhibitor KapD [Bacillus cereus Q1]
gi|228584331|gb|EEK42466.1| Sporulation inhibitor KapD [Bacillus cereus m1293]
gi|228641826|gb|EEK98126.1| Sporulation inhibitor KapD [Bacillus cereus BDRD-ST26]
gi|324328790|gb|ADY24050.1| sporulation inhibitor KapD [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358355427|dbj|BAL20599.1| sporulation inhibitor KapD [Bacillus cereus NC7401]
gi|401083839|gb|EJP92092.1| hypothetical protein IAU_03449 [Bacillus cereus IS075]
gi|401092202|gb|EJQ00336.1| hypothetical protein IC5_04569 [Bacillus cereus AND1407]
gi|401199398|gb|EJR06300.1| hypothetical protein II7_05017 [Bacillus cereus MSX-A12]
gi|401214958|gb|EJR21679.1| hypothetical protein II9_00632 [Bacillus cereus MSX-D12]
gi|401237374|gb|EJR43829.1| hypothetical protein IIK_05319 [Bacillus cereus VD102]
gi|401796184|gb|AFQ10043.1| sporulation inhibitor KapD [Bacillus cereus FRI-35]
Length = 207
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G E + +VRP P LTD C
Sbjct: 6 FLFLDFEFTMPQHRK-KPKGFFPEIIEVGLVSVVGCKVE--DTYSAHVRPKTFPSLTDRC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEVVDKGISFPELVEKLAEYEK--------RCKPTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ P + Q +L + + K FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 KAGVDFP-FQGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|2920819|gb|AAC04618.1| similar to C. elegans hypothetical protein; similar to AF038615
(PID:g2736329), partial [Homo sapiens]
Length = 89
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EIIEFP + ++G + EI + F YV+P P LT FC ELTGI Q VD +L + L
Sbjct: 1 EIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLER 60
Query: 83 HDKWLLQMGLNNTNFS--VVTWSDWDCQV 109
D+W+ + GL + N VT DWD +V
Sbjct: 61 VDEWMAKEGLLDPNVKSIFVTCGDWDLKV 89
>gi|337750893|ref|YP_004645055.1| hypothetical protein KNP414_06666 [Paenibacillus mucilaginosus
KNP414]
gi|336302082|gb|AEI45185.1| hypothetical protein KNP414_06666 [Paenibacillus mucilaginosus
KNP414]
Length = 221
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSG--EIIACFQTYVRPTFEPLLTDFCKE 61
Y++ D E T ++++ EIIE +V V G I+ FQT+V+PT +P LT
Sbjct: 3 YIIYDLEFTVQRKQH-QIAEIIEIGAVRVKETDGTAAIVDTFQTFVKPTKQPTLTPSTVS 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI+Q V EA+ +W + ++ + +W D +L + +++Q
Sbjct: 62 FTGIKQEDVAGAPQFREAVKAFTEW-----IGEEDYYLCSWGPDDKMQLLR---QTRELQ 113
Query: 122 KPAYFNQWI----NLRVPFSKVFGD---VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
WI NL+ +S++ + LK A+E+ ++ QG+ H LDDA N A+
Sbjct: 114 MEL---DWIRNHNNLQSQYSRMINPEVYKQVGLKRALEIEEIVLQGQQHRALDDAYNTAQ 170
Query: 175 LLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTP 217
V ++R F++ K+L A+ L + E +A + P
Sbjct: 171 ---VFVKRYSAFTLEKNL---ASEELLYSTELVYSEGEASHNP 207
>gi|89894542|ref|YP_518029.1| sporulation inhibitor KapD [Desulfitobacterium hafniense Y51]
gi|89333990|dbj|BAE83585.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 222
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 4 YVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEII--ACFQTYVRPTFEPLLTD 57
++V+DFE + K R P EIIE + V+ +G++ F +V+P F P L +
Sbjct: 16 FLVVDFEFSVPQSYGKPRAWFP-EIIEVGATVLDS-NGKLALDKTFNAFVKPRFWPRLAE 73
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+TGI+Q VD GI L EA+ K L + VV W D D ++ L + C
Sbjct: 74 ESYGITGIRQEDVDQGILLEEAIQHLQK------LAHPEAYVVAWGDADRKI-LGNVCEK 126
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P + +I+L + D +LK+A+E + G +H LDDAIN A+++
Sbjct: 127 YGLKYPFVWENYIDLAEQYKHYRSLDHLISLKKAIEENSIEQIGILHSALDDAINAAQVM 186
Query: 177 SVIMRRGF 184
+ +M G+
Sbjct: 187 ARMMSEGW 194
>gi|398306161|ref|ZP_10509747.1| sporulation inhibitor KapD [Bacillus vallismortis DV1-F-3]
Length = 205
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E PQ EIIE + +V V E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYSPQNFFPEIIE--AGIVKSVDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N ++VTW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIVTWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDAGTGTHHKALDDALTAHKLFKLV 176
>gi|219668974|ref|YP_002459409.1| sporulation inhibitor KapD [Desulfitobacterium hafniense DCB-2]
gi|423074216|ref|ZP_17062948.1| exonuclease [Desulfitobacterium hafniense DP7]
gi|219539234|gb|ACL20973.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
hafniense DCB-2]
gi|361854934|gb|EHL06961.1| exonuclease [Desulfitobacterium hafniense DP7]
Length = 209
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 16/188 (8%)
Query: 4 YVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEII--ACFQTYVRPTFEPLLTD 57
++V+DFE + K R P EIIE + V+ +G++ F +V+P F P L +
Sbjct: 3 FLVVDFEFSVPQSYGKPRAWFP-EIIEVGATVLDS-NGKLALDKTFNAFVKPRFWPRLAE 60
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+TGI+Q VD GI L EA+ K L + VV W D D ++ L + C
Sbjct: 61 ESYGITGIRQEDVDQGILLEEAIQHLQK------LAHPEAYVVAWGDADRKI-LGNVCEK 113
Query: 118 KKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P + +I+L + D +LK+A+E + G +H LDDAIN A+++
Sbjct: 114 YGLKYPFVWENYIDLAEQYKHYRSLDHLISLKKAIEENSIEQIGILHSALDDAINAAQVM 173
Query: 177 SVIMRRGF 184
+ +M G+
Sbjct: 174 ARMMSEGW 181
>gi|134111855|ref|XP_775463.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258122|gb|EAL20816.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 102/256 (39%), Gaps = 42/256 (16%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEII---EFPSVVV----SGVSG----EIIACFQTYVR 48
+ ++ D EATC + +P EII EFP V+V G E I F++YVR
Sbjct: 181 YRSFLCFDVEATCRGGKEFDYPNEIIASPEFPVVLVRWGEPNEEGKRVLEKIDSFRSYVR 240
Query: 49 PTFEPLLTDFCKELTGIQQHQVDNGITLGEALY----FHDKWLLQMGLNNTNFSVVTWSD 104
PT+ P+LTDFCK LTGIQQ VD E L + DKW L+ + VT
Sbjct: 241 PTWRPILTDFCKSLTGIQQETVDKSPIFPEVLKQLEGWLDKWDLRGDKGLKDALWVTDGP 300
Query: 105 WDCQVMLESECRIKKIQK-PAYFN--------------QWINLRVPFSKVFGDVRCNLKE 149
WD + + + I P YF+ IN R ++ D N +
Sbjct: 301 WDLRDFVPKQLHITPPNPFPNYFHGPYLNIKHAVQSVMSEINRRRVYAAAHPDNAANERA 360
Query: 150 AVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFL 209
+ G+ G A L + RRG + + +P + +R
Sbjct: 361 TQPITTSRRAGKWRPG-----QGAEPLGGVSRRGPREATPPPAQGVTSPATVMVDR---- 411
Query: 210 EPQAMYTPPHTSLIHE 225
+ TPP TS+ E
Sbjct: 412 --APLPTPPRTSVRKE 425
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 141 GDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPN 199
GD N+ E GL ++GR H GLDDA NI+R+L + R F + P +
Sbjct: 426 GDYYLNIAGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQPMGSGK 485
Query: 200 CLTW 203
W
Sbjct: 486 RYPW 489
>gi|296330790|ref|ZP_06873266.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675737|ref|YP_003867409.1| exoribonuclease (3'-5') [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296152104|gb|EFG92977.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413981|gb|ADM39100.1| putative exoribonuclease (3'-5') [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 205
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E PQ EIIE + +V V E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYSPQNFFPEIIE--AGIVKSVDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFKLV 176
>gi|403235758|ref|ZP_10914344.1| sporulation inhibitor KapD [Bacillus sp. 10403023]
Length = 207
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T + + +PQ EIIE V V + +II + ++V+P P LT+ C
Sbjct: 7 YLFIDFEFTMPEGKG-NPQGFYPEIIEVGLVSVK--NQKIIEKYSSFVQPIKFPTLTERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q QVD+GIT E + L N ++ ++VTW + D +V+ + +K
Sbjct: 64 KSFLNISQEQVDSGITFNELIS-----KLSGYENLSSSTIVTWGNMDMKVLRHNS---QK 115
Query: 120 IQKPAYFN-QWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P F + +L + + + FGD + L +AV+ G G+ HC LDDA+ +
Sbjct: 116 AGLPFPFKGKQRDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHCALDDALTTFNIFK 175
Query: 178 VI 179
++
Sbjct: 176 LV 177
>gi|90578520|ref|ZP_01234331.1| hypothetical protein VAS14_15754 [Photobacterium angustum S14]
gi|90441606|gb|EAS66786.1| hypothetical protein VAS14_15754 [Photobacterium angustum S14]
Length = 186
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+ V D E C + R EIIE + +G+I+ Q YVRP + + + FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 60 KELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ V+ NG L L ++ + W D +L+ EC K
Sbjct: 62 TELTGIKPEVVEKNGKPLSVILKS-----IEQKFGGRHKIYAAWGHDD--RILKKECLAK 114
Query: 119 KIQKPAYFNQWINLRVPFS--KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ P F +++NL F + + R + A+E+AG+ W+GR H G DA N+ARL
Sbjct: 115 ELKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARLA 172
Query: 177 SVI 179
+ +
Sbjct: 173 ATM 175
>gi|407979850|ref|ZP_11160656.1| sporulation inhibitor KapD [Bacillus sp. HYC-10]
gi|407413500|gb|EKF35203.1| sporulation inhibitor KapD [Bacillus sp. HYC-10]
Length = 205
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGV---SGE-IIACFQTYVRPTFEPLLTDFCK 60
+V+DFE T + HPQ FP ++ +GV S E II F +YV+P P LT CK
Sbjct: 7 LVVDFEFTM-PDGKYHPQNF--FPEIIEAGVVKASNETIIDTFSSYVKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
GI Q V+NG++ F +K + G ++TW + D +V L+ C + I
Sbjct: 64 SFLGITQQDVENGVSFET---FIEKLVSLDG--GEGCEIITWGNMDMKV-LKQNCMLNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + FGD L++A + G G+ H LDDA+ +L ++
Sbjct: 118 AFP-FKGKLRDLAFEYKTFFGDRTLTGLRKAAKEYGSDGAGQHHKALDDAMTTYQLFTLF 176
Query: 180 MR 181
+
Sbjct: 177 EK 178
>gi|379723943|ref|YP_005316074.1| hypothetical protein PM3016_6293 [Paenibacillus mucilaginosus 3016]
gi|386726675|ref|YP_006193001.1| hypothetical protein B2K_31805 [Paenibacillus mucilaginosus K02]
gi|378572615|gb|AFC32925.1| hypothetical protein PM3016_6293 [Paenibacillus mucilaginosus 3016]
gi|384093800|gb|AFH65236.1| hypothetical protein B2K_31805 [Paenibacillus mucilaginosus K02]
Length = 221
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSG--EIIACFQTYVRPTFEPLLTDFCKE 61
Y++ D E T ++++ EIIE +V V G I+ FQT+V+PT +P LT
Sbjct: 3 YIIYDLEFTVQRKQH-QIAEIIEIGAVRVKETDGTAAIVDTFQTFVKPTKQPTLTPSTVS 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI+Q V EA+ +W + ++ + +W D +L + +++Q
Sbjct: 62 FTGIKQEDVVGAPQFREAVKAFTEW-----IGEEDYYLCSWGPDDKMQLLR---QTRELQ 113
Query: 122 KPAYFNQWI----NLRVPFSKVFGD---VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
WI NL+ +S++ + LK A+E+ ++ QG+ H LDDA N A+
Sbjct: 114 MEL---DWIRNHNNLQSQYSRMINPEVYKQVGLKRALEIEEIVLQGQQHRALDDAYNTAQ 170
Query: 175 LLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQAMYTP 217
V ++R F++ K+L A+ L + E +A + P
Sbjct: 171 ---VFVKRYSAFTLEKNL---ASEELLYSTELVYSEGEASHNP 207
>gi|89071984|ref|ZP_01158580.1| hypothetical protein SKA34_08118 [Photobacterium sp. SKA34]
gi|89052085|gb|EAR57536.1| hypothetical protein SKA34_08118 [Photobacterium sp. SKA34]
Length = 186
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+ V D E C + R EIIE + +G+I+ Q YVRP + + + FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 60 KELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ V+ NG L L ++ + W D +L+ EC K
Sbjct: 62 TELTGIKPEVVEKNGKPLSVILKS-----IEQKFGGRHKIYAAWGHDD--RILKKECLAK 114
Query: 119 KIQKPAYFNQWINLRVPFS--KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+++ P F +++NL F + + R + A+E+AG+ W+GR H G DA N+ARL
Sbjct: 115 ELKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARLA 172
Query: 177 SVI 179
+ +
Sbjct: 173 ATM 175
>gi|21225668|ref|NP_631447.1| hypothetical protein SCO7397 [Streptomyces coelicolor A3(2)]
gi|7160111|emb|CAB76298.1| conserved hypothetical protein SC10G8.25c [Streptomyces coelicolor
A3(2)]
Length = 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
VID EATC + EI+E VV + E + + VRPT ++ FC ELT
Sbjct: 16 VIDLEATCWDGQPPPGEVSEIVEIGLAVVDLDARERVGRHRILVRPT-RSRVSAFCTELT 74
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI Q + D G++L A D + + G ++ +W D+D + + +C + P
Sbjct: 75 GITQAEADRGVSLARAC---DTLVREHGAGARPWA--SWGDYDRKQFVR-QCAADGVPYP 128
Query: 124 ---AYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
N + F++ G R + +A+E+AGL GR H G+DDA NIA L+ +
Sbjct: 129 FGHPAERAHTNAKAVFTEAHGLRRRPGMAQALEIAGLPLAGRHHRGVDDAWNIAALVLRL 188
Query: 180 MRR 182
R
Sbjct: 189 ADR 191
>gi|389577928|ref|ZP_10167956.1| DNA polymerase III epsilon subunit-like 3'-5' exonuclease
[Eubacterium cellulosolvens 6]
gi|389313413|gb|EIM58346.1| DNA polymerase III epsilon subunit-like 3'-5' exonuclease
[Eubacterium cellulosolvens 6]
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 4 YVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++V+D E + R + E IE +V++ EI +CF+TYV+P + +
Sbjct: 3 HIVVDLEMNSISRKSEARRICNLETIEIGAVMLDDDLQEI-SCFRTYVKPEYADGIAGNI 61
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
LTGI V+N EAL W L G ++ WSD D + E +K+
Sbjct: 62 TILTGITDDMVENAPKFNEALRMFTNWCLGTG---DAVTIHAWSDSDYN-QIAKEIVLKR 117
Query: 120 IQKPA-----YFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
A N W + + F G + + +LK A+ +AG+ + GR H LDDA N A
Sbjct: 118 YDVSAEEAELLGNAWSDFQQEFDSHLGFERQMSLKMALNMAGIDFTGREHDALDDARNTA 177
Query: 174 RLLSVIMRRGFKFSIT 189
LL ++ R F++T
Sbjct: 178 ELL-LVFRDENLFNVT 192
>gi|429506417|ref|YP_007187601.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488007|gb|AFZ91931.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 232
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V+ E+ F +Y++P P LT CK
Sbjct: 34 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVNDEVTETFSSYIKPKKFPKLTKRCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 91 TFLNITQKDVDGGITFNEFI----RKLNELD-PDKNCTIVTWGNMDMKV-LKQNCMFNHI 144
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 145 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDALTTYKLFKLV 203
Query: 180 MR 181
R
Sbjct: 204 ER 205
>gi|152977204|ref|YP_001376721.1| sporulation inhibitor KapD [Bacillus cytotoxicus NVH 391-98]
gi|152025956|gb|ABS23726.1| Exonuclease RNase T and DNA polymerase III [Bacillus cytotoxicus
NVH 391-98]
Length = 207
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE V V G + E + +YVRP P LT+ C
Sbjct: 6 FLFLDFEFTMPQNRK-KPKGFFPEIIEVGLVSVIGCTME--DTYSSYVRPESFPDLTNRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI Q VD GI+ L DK L+Q ++VTW + D +V L+ C +
Sbjct: 63 KDFLGIDQEAVDGGISF---LALVDK-LVQYE-ERYKPTIVTWGNMDMKV-LKHNCEVAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + +L + + + FG+ + L +A+E G + G+ HC LDDA+ + +
Sbjct: 117 VPFP-FSGVCRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|384160705|ref|YP_005542778.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens TA208]
gi|384165595|ref|YP_005546974.1| exoribonuclease (3'-5') [Bacillus amyloliquefaciens LL3]
gi|384169786|ref|YP_005551164.1| sporulation inhibitor [Bacillus amyloliquefaciens XH7]
gi|328554793|gb|AEB25285.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens TA208]
gi|328913150|gb|AEB64746.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens LL3]
gi|341829065|gb|AEK90316.1| sporulation inhibitor [Bacillus amyloliquefaciens XH7]
Length = 232
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V E+ F +Y++P P LT CK
Sbjct: 34 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVDDEVAETFSSYIKPKKFPKLTKRCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 91 TFLNITQEDVDGGITFNEFI----RKLNELD-PDKNCTIVTWGNMDMKV-LKQNCMFNHI 144
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 145 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDAMTTHKLFKLV 203
Query: 180 MR 181
R
Sbjct: 204 ER 205
>gi|357410023|ref|YP_004921759.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
flavogriseus ATCC 33331]
gi|320007392|gb|ADW02242.1| Exonuclease RNase T and DNA polymerase III [Streptomyces
flavogriseus ATCC 33331]
Length = 199
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V+D EATC + EIIE VV +G + + VRP ++ FC ELT
Sbjct: 10 VMDVEATCWDGQPPPGSVNEIIEIGLTVVDLSAGRRSSRHRVLVRPV-RSAVSGFCTELT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +VD G+T EA + + G ++ +W D+D + + R + P
Sbjct: 69 GLTQAEVDRGVTFAEACRI---LVEEYGAGERPWA--SWGDYD-RRQFARQSRADGVAYP 122
Query: 124 AYF---NQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
F N + F++ +G R + +A+ +AGL +GR H G DDA NIA L+ +
Sbjct: 123 FGFPTERTHTNAKAVFAESYGLRRKPGMDQALRIAGLPLEGRHHRGEDDAWNIAALVLDL 182
Query: 180 MRRG 183
+ RG
Sbjct: 183 VGRG 186
>gi|330447523|ref|ZP_08311171.1| exonuclease family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491714|dbj|GAA05668.1| exonuclease family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 185
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F+ V D E C + R EIIE + +G+I+ Q YVRP + + + FC
Sbjct: 3 FDRIVCFDLEMCCWNDGRTSRTGEIIEIGVAELDLNTGKIVRRAQHYVRPAKDEI-SPFC 61
Query: 60 KELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI+ V+ NG L L ++ + W D +L+ EC K
Sbjct: 62 TELTGIKPEIVEKNGKPLSVILKS-----IEQKFGGRHKIYAAWGHDD--RILKKECLAK 114
Query: 119 KIQKPAYFNQWINLRVPFS--KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P F +++NL F + + R + A+E+AG+ W+GR H G DA N+ARL
Sbjct: 115 DLKVP--FREYLNLATLFKLQRHVTNKRLGQRAAMEIAGVEWEGRQHSGYVDAYNLARLA 172
Query: 177 SVI 179
+ +
Sbjct: 173 ATM 175
>gi|403416188|emb|CCM02888.1| predicted protein [Fibroporia radiculosa]
Length = 416
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 28/181 (15%)
Query: 1 FEYYVVIDFEATCDKERNL--HPQEIIEFPSVVV-------SGVSGE--IIACFQTYVRP 49
++ ++V+D E TC + + +P EIIE+P ++ G++ E ++A F+++VRP
Sbjct: 179 YDAFLVLDVEGTCVEGSSSFDYPNEIIEWPVCLLRWKDKSPDGIAKELVVVAEFRSFVRP 238
Query: 50 TFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN--TNFSVVTW---SD 104
T+ PLL+ FC LTGI Q QVD+ E L + +L GL T +V + SD
Sbjct: 239 TWRPLLSQFCTNLTGITQDQVDSAPEFTELLQMFETFLEDNGLIEPVTGRRLVRYCWCSD 298
Query: 105 --WDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
+D + + +C I K++ PA WI V DVR ++ + I +G+
Sbjct: 299 GPFDVRDFVVKQCFISKVRMPA----WITGDV------LDVRGAVRTHTDRGDDIKRGKG 348
Query: 163 H 163
H
Sbjct: 349 H 349
>gi|291231281|ref|XP_002735595.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 217
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 2 EYYVVIDFEATCDKERNLHPQ-------EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPL 54
E+Y+ D EATC + Q EII+ +V++ + E FQ+Y RP P
Sbjct: 5 EFYLCFDLEATCVDPKCPANQVTEGFQPEIIDIGAVILDSNTLEEKGEFQSYCRPVKHPT 64
Query: 55 LTDFCKELTGIQQHQVDNGITLGEALYFHDKWL----LQMGLNNTNFSVVTWSDWDC-QV 109
L FC ELT I Q VD + W+ L+ G NF +VT +DC +
Sbjct: 65 LQPFCLELTKISQETVDAADEFPDVWGRFIDWMKSKGLKPGAETPNFQLVTDGPFDCGKY 124
Query: 110 MLESECRIKKIQKPAYFNQWINLRV---PFSKVFGDVRCNLKEAVELAGLIWQGRVHCGL 166
+ K+ P + ++ L+ + ++ G L + + GL+ G H L
Sbjct: 125 LFIQFNNTSKLSFPHWARNFVELKTEYKSYKRLVGRRWPKLSDMLAGLGLLRSGSNHRAL 184
Query: 167 DDAINIARLLSVIMRR 182
DA ++A + ++RR
Sbjct: 185 ADAHSVADVTKTVLRR 200
>gi|295696595|ref|YP_003589833.1| Exonuclease RNase T and DNA polymerase III [Kyrpidia tusciae DSM
2912]
gi|295412197|gb|ADG06689.1| Exonuclease RNase T and DNA polymerase III [Kyrpidia tusciae DSM
2912]
Length = 212
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 2 EYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
E + +DFE T ++R+ Q EIIE +VS + GEI T+VRP P LT+
Sbjct: 3 EQLLFLDFEFTMPEDRSTPEQFRPEIIELG--LVSVIDGEIFDRLSTFVRPMRFPTLTER 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
CK I+Q VD GI+ E + LQ + + VTW + D QV+ E+ C
Sbjct: 61 CKNFLQIRQEDVDAGISFRELVE-----TLQTYVELCPTTPVTWGNADLQVLREN-CGHA 114
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + + +L + + + FG+ + L +A+E G GR H LDDA+ +
Sbjct: 115 GLPFP-FDRRERDLSLEYKRFFGNRQQTGLWKAIEEYGRTGVGRHHRALDDALTTVEIFR 173
Query: 178 VI 179
+I
Sbjct: 174 MI 175
>gi|386759730|ref|YP_006232947.1| sporulation inhibitor KapD [Bacillus sp. JS]
gi|384933013|gb|AFI29691.1| sporulation inhibitor KapD [Bacillus sp. JS]
Length = 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD GI + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 TFLKITQKQVDEGIRFEDLI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFKLV 176
>gi|398818896|ref|ZP_10577475.1| DNA polymerase III, alpha subunit (gram-positive type)
[Brevibacillus sp. BC25]
gi|398026772|gb|EJL20348.1| DNA polymerase III, alpha subunit (gram-positive type)
[Brevibacillus sp. BC25]
Length = 239
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
+V D E T +++ P EIIE + VV G +G + FQ Y P E +T+ ++
Sbjct: 4 IVFDLETTLTYQKDKIP-EIIEIGAAKVVPGKNGVEVDTFQRYTFPAIERRITERTRKFI 62
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ + + I A +W+ G ++ F + TW D ++M+E R
Sbjct: 63 GLDKENMPTFIPFRRAFAEFMEWI---GTDSEYF-LCTWGQDDKRLMIEHCARFG--LDF 116
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + +++ P S + D + +LKEA++ AG+I +GR+H L DAI+ A LL
Sbjct: 117 NWMRNYNDIQPPISMLLADRKQMSLKEAIDTAGIIQEGRLHSALVDAIHTAHLL------ 170
Query: 183 GFKFSIT---KSLTPQANPN 199
K++ T K TP+ N N
Sbjct: 171 -IKYNKTVHLKENTPEENYN 189
>gi|323492478|ref|ZP_08097626.1| hypothetical protein VIBR0546_15616 [Vibrio brasiliensis LMG 20546]
gi|323313265|gb|EGA66381.1| hypothetical protein VIBR0546_15616 [Vibrio brasiliensis LMG 20546]
Length = 176
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + VSGEI+ Q YV+P + + + FC +LT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVSGEIVKRAQYYVKPEHDEV-SLFCSQLT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E + K N W D +L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLAEVIKSMVK-----NFGGANKIYAAWGRDD--RVLREECQAKGIDM 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P FN++INL + D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FNEFINLATLYRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|343501087|ref|ZP_08738969.1| hypothetical protein VITU9109_23160 [Vibrio tubiashii ATCC 19109]
gi|418478872|ref|ZP_13047965.1| hypothetical protein VT1337_10692 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342818964|gb|EGU53813.1| hypothetical protein VITU9109_23160 [Vibrio tubiashii ATCC 19109]
gi|384573422|gb|EIF03916.1| hypothetical protein VT1337_10692 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 176
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + V GEI+ Q YV+P + + + FC +LT
Sbjct: 7 VCFDLEMCCWNEGGVGTTGEIIEVGLAEIDLVKGEIVKRAQYYVKPETDEV-SLFCSQLT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L K TN W D ++L+ EC K I
Sbjct: 66 GITPRKIEKQGRPLEEVLKSMVK-----NFGGTNKIYAAWGRDD--LVLKQECLDKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P FN++INL F D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FNEFINLATLFRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|319650362|ref|ZP_08004505.1| sporulation inhibitor KapD [Bacillus sp. 2_A_57_CT2]
gi|317397923|gb|EFV78618.1| sporulation inhibitor KapD [Bacillus sp. 2_A_57_CT2]
Length = 206
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 4 YVVIDFEATCDKE----RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T ++ R P EIIE + +VS + ++ F +YV P P L++ C
Sbjct: 7 YLFIDFEFTMPEKGSAFRGFFP-EIIE--AGIVSVIGNQVCEEFSSYVTPVRFPKLSERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K I Q QVD GI E + K ++ M N ++VTW + D +V L + C
Sbjct: 64 KSFLHITQEQVDQGIDFLELV----KKMIDMNRNRPC-TIVTWGNMDMKV-LRNNCTHAG 117
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAI---NIARL 175
+ P + + ++L + + + FGD + L +AV+ G G+ H LDDA+ NI RL
Sbjct: 118 VDFP-FRGREVDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHRALDDALTTYNIFRL 176
Query: 176 LS 177
+
Sbjct: 177 VE 178
>gi|443634351|ref|ZP_21118526.1| sporulation inhibitor KapD [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443346027|gb|ELS60089.1| sporulation inhibitor KapD [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 205
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V V E++ F +Y+RP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSVDDEVVETFSSYIRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFKLV 176
>gi|373855960|ref|ZP_09598706.1| Exonuclease RNase T and DNA polymerase III [Bacillus sp. 1NLA3E]
gi|372455029|gb|EHP28494.1| Exonuclease RNase T and DNA polymerase III [Bacillus sp. 1NLA3E]
Length = 206
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 4 YVVIDFEAT----CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
Y+ IDFE T ++ + +P EIIE + +VS V ++ F +YV P P+L++ C
Sbjct: 7 YLFIDFEFTMPEKSERYKGFYP-EIIE--AGIVSVVDDKVQEQFSSYVTPIRFPILSERC 63
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECRIK 118
K I Q QV+ GI F D LNN+ S++TW + D +V L + C
Sbjct: 64 KSFLRISQGQVEQGIP------FQDLIRKMNELNNSYPSSIITWGNMDMRV-LRNNCHHA 116
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + + I+L + + + FGD + L +AV+ G G+ H LDDA+ +
Sbjct: 117 DLMFP-FTGKEIDLSMEYKRFFGDQNQTGLWKAVQEYGKEGTGKHHRALDDAMTTFNIFK 175
Query: 178 VIMR 181
++ +
Sbjct: 176 LVEK 179
>gi|390457404|ref|ZP_10242932.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus peoriae KCTC 3763]
Length = 223
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIA-CFQTYVRPTFEPLLTDFCKE 61
Y++ D E T + + EII+ +V VV G G +A F ++VRP+ P+L+ +
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLSTDTVQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q +D EA+ WL ++++ + W D Q ++ S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFVAWL----GTDSSYYLCAWGPDDRQKLV-SHCRTHHVD 116
Query: 122 KPAYFNQWINLRVPFSKVFGD----VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ + +++ P S++FG + +L +A+EL + + G+ H LDDAIN A++
Sbjct: 117 L-GWIHNTNDIQKPISRLFGSGGKYRQLSLSQALELCHIDFDGQQHRALDDAINTAQVFM 175
Query: 178 VIMRR 182
+ R
Sbjct: 176 HLFDR 180
>gi|154687258|ref|YP_001422419.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens FZB42]
gi|375363574|ref|YP_005131613.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384266676|ref|YP_005422383.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385266026|ref|ZP_10044113.1| sporulation inhibitor KapD [Bacillus sp. 5B6]
gi|387899738|ref|YP_006330034.1| sporulation inhibitor [Bacillus amyloliquefaciens Y2]
gi|421730468|ref|ZP_16169597.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451345723|ref|YP_007444354.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens IT-45]
gi|154353109|gb|ABS75188.1| KapD [Bacillus amyloliquefaciens FZB42]
gi|371569568|emb|CCF06418.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380500029|emb|CCG51067.1| putative 3'-5' exonuclease kapD [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385150522|gb|EIF14459.1| sporulation inhibitor KapD [Bacillus sp. 5B6]
gi|387173848|gb|AFJ63309.1| sporulation inhibitor [Bacillus amyloliquefaciens Y2]
gi|407076434|gb|EKE49418.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849481|gb|AGF26473.1| sporulation inhibitor KapD [Bacillus amyloliquefaciens IT-45]
Length = 205
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V+ E+ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVNDEVTETFSSYIKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 64 TFLNITQKDVDGGITFNEFI----RKLNELDPDK-NCTIVTWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA +L ++
Sbjct: 118 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFKLV 176
Query: 180 MR 181
R
Sbjct: 177 ER 178
>gi|452856762|ref|YP_007498445.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452081022|emb|CCP22789.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 232
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V+ E+ F +Y++P P LT CK
Sbjct: 34 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVNDEVTETFSSYIKPKKFPKLTKRCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 91 TFLNITQKDVDGGITFNEFI----RKLNELDPDK-NCTIVTWGNMDMKV-LKQNCMFNHI 144
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA +L ++
Sbjct: 145 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFKLV 203
Query: 180 MR 181
R
Sbjct: 204 ER 205
>gi|163800755|ref|ZP_02194655.1| hypothetical protein 1103602000593_AND4_00793 [Vibrio sp. AND4]
gi|159175104|gb|EDP59901.1| hypothetical protein AND4_00793 [Vibrio sp. AND4]
Length = 176
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGRTGEIIEVGLAELDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L L G N ++ +W D V+L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--VILLEECQQKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E G++W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIVWEGRQHSGYVDAYNLAKLALTML 176
>gi|350267338|ref|YP_004878645.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349600225|gb|AEP88013.1| sporulation inhibitor KapD [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 205
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E PQ EIIE + +V V E++ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYSPQNFFPEIIE--AGIVKSVDDEVVETFSSYIKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDTGTGTHHKALDDALTAYKLFKLV 176
>gi|384176743|ref|YP_005558128.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595967|gb|AEP92154.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 205
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN----NTNFSVVTWSDWDCQVMLESECR 116
I Q QVD G + F D L LN N +++TW + D +V L+ C
Sbjct: 64 SFLKITQKQVDEG------MRFED---LIRKLNELDPEKNSTIITWGNMDMKV-LKQNCM 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I P + + +L + + FGD L +A E G G H LDDA+ +L
Sbjct: 114 FNHIPFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKL 172
Query: 176 LSVI 179
++
Sbjct: 173 FKLV 176
>gi|226311041|ref|YP_002770935.1| hypothetical protein BBR47_14540 [Brevibacillus brevis NBRC 100599]
gi|226093989|dbj|BAH42431.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 113
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y++ D EATC + EIIE +V ++ + +I FQT+++P P+L+DFCK+LT
Sbjct: 3 YIIFDLEATCWENDRTKQNEIIEIGAVKLNE-NLAVIGEFQTFIKPKLNPILSDFCKKLT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD 106
I Q +VD + GEA+ W+ + + + +W +D
Sbjct: 62 SISQKEVDQAPSFGEAISHFQNWI------GSEYHLCSWGFYD 98
>gi|12654485|gb|AAH01072.1| ERI3 protein [Homo sapiens]
gi|13325281|gb|AAH04456.1| ERI3 protein [Homo sapiens]
Length = 128
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 70 VDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVMLESECRIKKIQKPAYFN 127
VD +L + L D+W+ + GL + N VT DWD +VML +C+ + YF
Sbjct: 2 VDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFK 61
Query: 128 QWINLRVPFSKVFG----DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRG 183
QWINL+ +S G + ++ + + L + GR H G+DD NIA ++ + RG
Sbjct: 62 QWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHI---GRPHSGIDDCKNIANIMKTLAYRG 118
Query: 184 FKFSIT 189
F F T
Sbjct: 119 FIFKQT 124
>gi|390597111|gb|EIN06511.1| hypothetical protein PUNSTDRAFT_53952 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 77
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII--ACFQTYVRPTFEPLLTDF 58
EY ++DFEATCD + QEIIEFP++V + ++ A F YVRP +P LT+F
Sbjct: 8 LEYLFILDFEATCDDKEPKITQEIIEFPTLVYDLNTNRVLDEATFHEYVRPVVKPQLTEF 67
Query: 59 CKELTGIQQ 67
C LTGI Q
Sbjct: 68 CVSLTGITQ 76
>gi|394992550|ref|ZP_10385325.1| sporulation inhibitor KapD [Bacillus sp. 916]
gi|393806587|gb|EJD67931.1| sporulation inhibitor KapD [Bacillus sp. 916]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V+ E+ F +Y++P P LT CK
Sbjct: 34 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVNDEVTETFSSYIKPKKFPKLTKRCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 91 TFLNITQKDVDGGITFNEFI----RKLNELDPDK-NCTIVTWGNMDMKV-LKQNCMFNHI 144
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA +L ++
Sbjct: 145 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDARTTYKLFKLV 203
Query: 180 MR 181
R
Sbjct: 204 ER 205
>gi|14581470|gb|AAK38347.1| prion interactor PINT1 [Mus musculus]
Length = 125
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 53 PLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFS--VVTWSDWDCQVM 110
P LT FC ELTGI Q VD +L + L D+W+ + GL + N VT DWD +VM
Sbjct: 2 PQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVM 61
Query: 111 LESECRIKKIQKPAYFNQWINL-RVPFSKVFG 141
L +C + YF QWINL +VP S G
Sbjct: 62 LPGQCHYLGLPVADYFKQWINLKKVPLSSSQG 93
>gi|449095591|ref|YP_007428082.1| sporulation inhibitor [Bacillus subtilis XF-1]
gi|449029506|gb|AGE64745.1| sporulation inhibitor [Bacillus subtilis XF-1]
Length = 205
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN----NTNFSVVTWSDWDCQVMLESECR 116
I Q QVD G + F D L LN N +++TW + D +V L+ C
Sbjct: 64 SFLKITQKQVDEG------MRFED---LIRKLNELDPEKNSTIITWGNMDMKV-LKQNCM 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I P + + +L + + FGD L +A E G G H LDDA+ +L
Sbjct: 114 FNHIPFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKL 172
Query: 176 LSVI 179
++
Sbjct: 173 FKLV 176
>gi|120554172|ref|YP_958523.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120324021|gb|ABM18336.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 279
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 5 VVIDFEATC--------DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+++D EATC + +++ EIIEF ++ +GE++ VRP P L+
Sbjct: 14 LIVDLEATCWESSRLPNGERQSIGNMEIIEF-GCALATRTGELLDSRSFLVRPVRNPDLS 72
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
FC+ LTGI Q V+ E + D+WL G + +W ++D + +++E
Sbjct: 73 AFCRSLTGISQAMVNAAPPYPEVVRALDEWL---GQPAESLIWCSWGNYD-RHHIQAESE 128
Query: 117 IKKIQKPAYFN-QWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
I P + + +NL+ + + G + L A+ L ++GR H G+DDA NI R
Sbjct: 129 AHGI-APRFLSCPHLNLKRIWRRSTGQKKKTGLASALAFHNLAFEGRPHRGVDDARNIVR 187
Query: 175 LL 176
LL
Sbjct: 188 LL 189
>gi|71004294|ref|XP_756813.1| hypothetical protein UM00666.1 [Ustilago maydis 521]
gi|46095601|gb|EAK80834.1| hypothetical protein UM00666.1 [Ustilago maydis 521]
Length = 419
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 17/88 (19%)
Query: 1 FEYYVVIDFEATCD---KERNLH----------PQEIIEFPSVVVSGVSG----EIIACF 43
F+ ++V+D EATC+ K RNL+ P EIIEFP V++ + + F
Sbjct: 59 FDTFLVLDVEATCESTRKYRNLNHGYETGSFQFPNEIIEFPVVLLRWNENTHQLDTVDVF 118
Query: 44 QTYVRPTFEPLLTDFCKELTGIQQHQVD 71
+YVRPTF P LT FC++LTG+ Q QVD
Sbjct: 119 HSYVRPTFRPRLTKFCRDLTGVTQAQVD 146
>gi|321312691|ref|YP_004204978.1| sporulation inhibitor KapD [Bacillus subtilis BSn5]
gi|428280638|ref|YP_005562373.1| sporulation inhibitor KapD [Bacillus subtilis subsp. natto BEST195]
gi|430757751|ref|YP_007208348.1| hypothetical protein A7A1_2259 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|291485595|dbj|BAI86670.1| sporulation inhibitor KapD [Bacillus subtilis subsp. natto BEST195]
gi|320018965|gb|ADV93951.1| sporulation inhibitor KapD [Bacillus subtilis BSn5]
gi|430022271|gb|AGA22877.1| Hypothetical protein YugB [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 205
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFKLV 176
>gi|94311778|ref|YP_584988.1| 3'-5' Exonuclease [Cupriavidus metallidurans CH34]
gi|93355630|gb|ABF09719.1| 3'-5' Exonuclease [Cupriavidus metallidurans CH34]
Length = 194
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 5 VVIDFEATCDKERNLH-PQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
+V+D EATC ++ E E +V V G +G ++ FQ++VRP P LT F LT
Sbjct: 6 LVVDLEATCSEDMAAGWEMETAEIGAVWVRG-NGTVLDHFQSFVRPVVNPQLTAFFTNLT 64
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI Q VD+ A +++ + + + + V+W WD + +L R + +
Sbjct: 65 GISQSDVDDAPLFTVAAEQLRQFVERYQMPGSIW--VSWGAWDARQLLRDSARYRIAEPI 122
Query: 124 AYFNQWINLRVPFSKV--FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
A +Q N + F+K G + +A +LAG G H LDDA++I LL +
Sbjct: 123 ALPHQ--NGKRLFAKAQKIGK-EVGMAKACQLAGQTIAGTHHRALDDAMSIVGLLPFV 177
>gi|409046206|gb|EKM55686.1| hypothetical protein PHACADRAFT_256486 [Phanerochaete carnosa
HHB-10118-sp]
Length = 342
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEIIEFPSVVV---------SGVSGEIIACFQTYVRPT 50
++ ++V+D EATC + + EIIE+P ++ E++ F+++VRP
Sbjct: 89 YDAFLVVDVEATCMPGTDFNYANEIIEWPVCLLRWKYKSENGQASRLEVVDEFRSFVRPM 148
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEALYFH-DKWLLQMGLNNT-------NFSVVTW 102
+ P L+ FC +LTGI Q V+ ++ +++++ GL + F +
Sbjct: 149 WRPQLSSFCTQLTGITQENVNAAPPFSTMVHSAFREFMVRNGLIDAYSGEPLVRFCWCSD 208
Query: 103 SDWDCQVMLESECRIKKIQKPAYF-----------NQWINLRVPFSKVFGDVRCN----- 146
WD + + +C I ++ P + QW P N
Sbjct: 209 GPWDLRDFVVKQCFISRMAVPTWLARDFIDVRRIVAQWQQRNDPNKPRQQGPTPNCAYLP 268
Query: 147 LKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
+ + L GL +QGR HCG DD N+AR+++ + R+G S+
Sbjct: 269 MVRQLHLLGLGPFQGRQHCGQDDTRNVARIITELARQGMPLKPNTSI 315
>gi|16080199|ref|NP_391025.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
168]
gi|221311089|ref|ZP_03592936.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
168]
gi|221315416|ref|ZP_03597221.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221320332|ref|ZP_03601626.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324616|ref|ZP_03605910.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SMY]
gi|402777305|ref|YP_006631249.1| exoribonuclease (3'-5') [Bacillus subtilis QB928]
gi|418031651|ref|ZP_12670136.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|452912438|ref|ZP_21961066.1| exonuclease family protein [Bacillus subtilis MB73/2]
gi|81637456|sp|O05231.1|KAPD_BACSU RecName: Full=Probable 3'-5' exonuclease KapD
gi|1934782|emb|CAB07913.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2635643|emb|CAB15136.1| putative exoribonuclease (3'-5') [Bacillus subtilis subsp. subtilis
str. 168]
gi|351472710|gb|EHA32823.1| sporulation inhibitor KapD [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402482484|gb|AFQ58993.1| Putative exoribonuclease (3'-5') [Bacillus subtilis QB928]
gi|407961976|dbj|BAM55216.1| sporulation inhibitor KapD [Bacillus subtilis BEST7613]
gi|407965990|dbj|BAM59229.1| sporulation inhibitor KapD [Bacillus subtilis BEST7003]
gi|452117466|gb|EME07860.1| exonuclease family protein [Bacillus subtilis MB73/2]
Length = 205
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKALDDALTAYKLFKLV 176
>gi|228982489|ref|ZP_04142748.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|410678565|ref|YP_006930936.1| exonuclease [Bacillus thuringiensis Bt407]
gi|228776672|gb|EEM24980.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|409177695|gb|AFV21999.1| exonuclease [Bacillus thuringiensis Bt407]
Length = 186
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++ ++ID E+TC K R P+ EIIE +VV+ + EI+ +QT+V+P P L+
Sbjct: 1 MKHLLIIDLESTCFK-RGAEPRNFFSEIIEIGAVVLHTETFEIVEEYQTFVKPVLFPTLS 59
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
++C LT I+Q +VD G ++ +A+ + N + +W +D + + C
Sbjct: 60 EYCLHLTTIRQDEVDYGKSIKDAMN-----EIASLYNKYDCVFASWGFYD-KKQFKQVCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P + + I+L+ ++ A+++ L +G H G+DDA NI+++
Sbjct: 114 RFGVNYP-FGHLHISLKHQHGTWTRQRPMGMERALKMHHLPLEGIHHRGIDDARNISKIA 172
Query: 177 SVIMRRG 183
S ++ G
Sbjct: 173 SHMIHSG 179
>gi|261253256|ref|ZP_05945829.1| hypothetical protein VIA_003281 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954741|ref|ZP_12597772.1| hypothetical protein VIOR3934_04644 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260936647|gb|EEX92636.1| hypothetical protein VIA_003281 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342814712|gb|EGU49647.1| hypothetical protein VIOR3934_04644 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 176
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + V+GEI+ Q YV+P + + + FC +LT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVNGEIVKRAQYYVKPEHDEV-SLFCSQLT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +V+ G L E L K N W D +L EC+ K I+
Sbjct: 66 GITPRKVEKQGRPLEEVLKSMVK-----NFGGANKIYAAWGRDD--RILIKECQDKGIEM 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P FN++INL + D R K A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FNEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKL 171
>gi|440790416|gb|ELR11699.1| three prime histone mRNA exonuclease 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 256
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRP-TF-EPLLTDFC 59
++++V+D E QEI+EFP +V+ + E+ F YVRP TF + L +
Sbjct: 37 DFFLVLDLEGK---------QEILEFPVAIVNVKTLEVEDFFHRYVRPVTFSDEQLAQYI 87
Query: 60 KELTG---IQQHQVDNGITLGEALYFHDKWLLQMGLNNT------------------NFS 98
G + + ++ + + L + WL GL ++ +F
Sbjct: 88 NGKYGKFGLTEKWFESAMPFTDVLVQFNDWLGHHGLLHSILRSEDGEETGEERQAAYSFL 147
Query: 99 VVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIW 158
VT +WD + + +C I K P YF++W+NL+ + + ++ + G+
Sbjct: 148 FVTCGNWDIKTQIPRQCAISKFDMPGYFHEWVNLKDVYLNFYKHKALGMRSMLSGLGIQL 207
Query: 159 QGRVHCGLDDAINIARLLSVIMRRG 183
+G H G DD NI +++ ++ G
Sbjct: 208 EGDHHSGKDDVHNICKIVMRMVNDG 232
>gi|323508214|emb|CBQ68085.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 418
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 1 FEYYVVIDFEATCD---KERNL----------HPQEIIEFPSVVVSGVSG----EIIACF 43
F+ ++V+D EATC+ K RNL +P EIIEFP V++ + +
Sbjct: 61 FDTFLVLDVEATCEATRKYRNLQHGFETGSFQYPNEIIEFPVVLLRWNEATHQLDTAGVY 120
Query: 44 QTYVRPTFEPLLTDFCKELTGIQQHQVDNGIT 75
+YVRPTF P LT FC++LTG+ Q QVD T
Sbjct: 121 HSYVRPTFRPQLTKFCRDLTGVTQAQVDAAPT 152
>gi|343510247|ref|ZP_08747499.1| hypothetical protein VIS19158_00435 [Vibrio scophthalmi LMG 19158]
gi|343516501|ref|ZP_08753536.1| hypothetical protein VIBRN418_18333 [Vibrio sp. N418]
gi|342796086|gb|EGU31781.1| hypothetical protein VIBRN418_18333 [Vibrio sp. N418]
gi|342802960|gb|EGU38346.1| hypothetical protein VIS19158_00435 [Vibrio scophthalmi LMG 19158]
Length = 176
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + V GEI+ Q YV+P + + + FC ELTGI +V+ G L E +
Sbjct: 26 EIIEIGLAEIDLVKGEIVKRAQYYVKPEHDEV-SLFCAELTGITPRKVEKQGRPLAEVI- 83
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
+ G NN ++ W D ++L EC K I+ P F +++NL +
Sbjct: 84 --KSMIKNFGGNNKIYA--AWGRDD--LVLAKECADKGIEMP--FKEYVNLATIYRIQNR 135
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 136 LKEKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|268577621|ref|XP_002643793.1| Hypothetical protein CBG02004 [Caenorhabditis briggsae]
Length = 607
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEI--IACFQTYVRPTFEPLLTDF 58
++ ++++F T D+ + EII+F +V++ +I F +VRP P L+D+
Sbjct: 9 YDNLLILNFATTRDENNYDYASEIIQFSVIVLNTKEKKIREDVKFDKFVRPIINPTLSDY 68
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C TGI Q+ VD+ WL + T ++ V +S D + + + +
Sbjct: 69 CTNHTGISQNTVDSAEPFPVVFEEFSAWLQENDFQETRYAFVVFSRRDLWFIAQYQFLLV 128
Query: 119 KIQKPAYFNQWINLRVPFSKV-----FGDVRCN-LKEAVELAGLIWQGRVHCGLDDAINI 172
K PA F QW+++ K + N +++ + + ++G H +D+ +
Sbjct: 129 KQPLPAMFKQWVDMNATMKKAQQGQDYHRPEENIIQDMSNIYNIPYEGTAHNAMDNCHFL 188
Query: 173 ARLLSVIMRRG 183
A++ ++ G
Sbjct: 189 AKITKRVLDDG 199
>gi|298489770|ref|YP_003719947.1| exonuclease RNase T and DNA polymerase III ['Nostoc azollae' 0708]
gi|298231688|gb|ADI62824.1| Exonuclease RNase T and DNA polymerase III ['Nostoc azollae' 0708]
Length = 178
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 5 VVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+VI+ EATC + H E IE +V+++ + EI + FQ +++P P+LTDF + L
Sbjct: 1 MVINLEATCSDKHTFYRHEMETIEIGAVILNRQTWEIDSEFQQFIKPVRNPILTDFWRNL 60
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
T I Q QVD E + +W+ N ++D L+ C+ I
Sbjct: 61 TTISQKQVDTAPQFPEVMPKLAEWMSSF----PNDIFCPGGNYDKTQFLQY-CKFHNIPY 115
Query: 123 PAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
P + + N++ FS+ G + + +A++ G+ +G + G+D+A NIA
Sbjct: 116 P-FGPEHRNIKKQFSEYLGVYNKFGMAQALQHLGMELKGTHYRGIDNAHNIA 166
>gi|405120691|gb|AFR95461.1| hypothetical protein CNAG_02368 [Cryptococcus neoformans var.
grubii H99]
Length = 604
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 1 FEYYVVIDFEATCDKERNL-HPQEII---EFPSVVV----SGVSG----EIIACFQTYVR 48
+ ++ D EATC + +P EII EFP V+V G E I F++YVR
Sbjct: 181 YRSFLCFDVEATCRGGKEFDYPNEIIASTEFPVVLVRWGEPNEEGKRVLEKIDSFRSYVR 240
Query: 49 PTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWL 87
PT+ P+LTDFCK LTGIQQ VD E L ++WL
Sbjct: 241 PTWRPVLTDFCKSLTGIQQETVDKSPIFPEVLKQLEEWL 279
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 136 FSKVFGDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTP 194
F + GD N+ E GL ++GR H GLDDA NI+R+L + R F + P
Sbjct: 414 FVRKEGDYYLNIAGMCEALGLGEFEGRQHSGLDDATNISRILIALSRWNVIFEPNGVIQP 473
Query: 195 QANPNCLTW 203
+ W
Sbjct: 474 MGSGKRYPW 482
>gi|77551215|gb|ABA94012.1| hypothetical protein LOC_Os11g32310 [Oryza sativa Japonica Group]
gi|125577333|gb|EAZ18555.1| hypothetical protein OsJ_34082 [Oryza sativa Japonica Group]
Length = 130
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 153 LAGLIWQGRVHCGL---DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFL 209
+A L + GR H GL DDA N A V++RRG T P P
Sbjct: 1 MAWLPFDGRPHIGLVVYDDARNTA----VLVRRG---GFTAGSLPLPLPAAQAAAAEEEG 53
Query: 210 EPQAMYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGNWTPNRGACCN 269
+ + RYC+CG +S +K ++RPGP +G FFGCG WT RGA C+
Sbjct: 54 VVVGGGGGGGGARV------RYCHCGVESREKEVRRPGPTQGRHFFGCGRWTAARGAACD 107
Query: 270 YFQW 273
Y+ W
Sbjct: 108 YYVW 111
>gi|163816457|ref|ZP_02207821.1| hypothetical protein COPEUT_02646 [Coprococcus eutactus ATCC 27759]
gi|158448157|gb|EDP25152.1| exonuclease [Coprococcus eutactus ATCC 27759]
Length = 232
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 4 YVVIDFEAT-----CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E + ER + E+IE +V ++ E I F+ YV+P F +
Sbjct: 12 HIVVDLEMNWLDFKYENERKISTNEVIEIGAVTMNE-KFEEIGAFKMYVKPQFNEKVVKK 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
++LTGI ++ + +A KW + G + WSD D ++ L E ++K
Sbjct: 71 VEKLTGITMDKLQDSPVFADAFDAFIKWCISFGEEVVMYG---WSDSD-ELQLRREMKLK 126
Query: 119 KI----QKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I F QW + + FS + G R L +AV+ AG+ + G+ H DA N A
Sbjct: 127 NIPWKEDVDKVFRQWHDFQKEFSDLVGIGRIITLSQAVDYAGIDFAGQKHDACCDARNTA 186
Query: 174 RLLSVIMRRGFKFSITKSLTPQANPNCLT 202
LL++ KS+ N LT
Sbjct: 187 YLLALTKDEKRFAKTMKSVLEAFNHEELT 215
>gi|444427542|ref|ZP_21222919.1| hypothetical protein B878_16325 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444239190|gb|ELU50764.1| hypothetical protein B878_16325 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 176
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +V+ G L E L L G N ++ +W D ++L EC+ K I
Sbjct: 66 GITPRKVEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKSIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|290963155|ref|YP_003494337.1| hypothetical protein SCAB_88781 [Streptomyces scabiei 87.22]
gi|260652681|emb|CBG75814.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
VID EATC + EIIE VV +G ++ + VRP ++DFC ELT
Sbjct: 10 VIDVEATCWDGQPPPGSVNEIIEIGLTVVDVSAGRRVSRHRLLVRP-VRSTVSDFCTELT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +V+ G+T EA +L +W ++D + + + + P
Sbjct: 69 GLTQAEVEQGVTFAEACR-----ILVEEYEAGERPWASWGEYD-RRQFARQSQADAVAYP 122
Query: 124 ---AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
N + F++ +G R + A+++AGL +GR H G DDA NIA L+ +
Sbjct: 123 FGHPTERTHTNAKAVFTEAYGLRRKPGMAHALQIAGLPLEGRHHRGEDDAWNIAALVLDL 182
Query: 180 MRRG 183
RG
Sbjct: 183 AGRG 186
>gi|228993630|ref|ZP_04153537.1| Sporulation inhibitor KapD [Bacillus pseudomycoides DSM 12442]
gi|228999668|ref|ZP_04159244.1| Sporulation inhibitor KapD [Bacillus mycoides Rock3-17]
gi|229007227|ref|ZP_04164828.1| Sporulation inhibitor KapD [Bacillus mycoides Rock1-4]
gi|228753981|gb|EEM03418.1| Sporulation inhibitor KapD [Bacillus mycoides Rock1-4]
gi|228760030|gb|EEM09000.1| Sporulation inhibitor KapD [Bacillus mycoides Rock3-17]
gi|228766059|gb|EEM14706.1| Sporulation inhibitor KapD [Bacillus pseudomycoides DSM 12442]
Length = 207
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE +VS V + + +YVRP LT+ C
Sbjct: 6 FLFLDFEFTMPQNRK-KPKGFFPEIIEVG--LVSVVDCVVEDTYSSYVRPETFSCLTERC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ GI Q VD GI+ E + + L+Q ++VTW + D +V L+ C
Sbjct: 63 KKFLGINQEAVDGGISFLELV----EKLVQYE-KRCQTTIVTWGNMDMKV-LKHNCEAIG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSV 178
+ P + Q +L + + + FG+ + L +A+E G + G+ HC LDDAI + +
Sbjct: 117 AEFP-FSGQCRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAITTYNIFKL 175
Query: 179 IMR 181
+ +
Sbjct: 176 VEK 178
>gi|118356253|ref|XP_001011385.1| exonuclease family protein [Tetrahymena thermophila]
gi|89293152|gb|EAR91140.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 475
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++Y ID+E C+ ++ EIIEFP VV +II F +YV+P +T
Sbjct: 250 YDYLFFIDYE--CN--QSYLGSEIIEFPIQVVDVKQLKIIDTFSSYVQPC--SKITKLIT 303
Query: 61 ELTGIQQHQVDNGITLGEALY----FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
LT I ++V N + + L F +K+L NN + V + + + + E
Sbjct: 304 NLTKIDDNKVQNAPKIQQVLQQVRIFLEKYLK----NNFDRCAVVYDNKSDFLFIVEESI 359
Query: 117 IKKIQKPAYFNQWINLRVPF----SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINI 172
K PA+ Q+I+L F + + R +LK ++ G+ +QG+ HCG DD N
Sbjct: 360 KKNFLLPAFLQQYIDLGTCFPIRNEQNINEQRISLKGMLDTLGMKFQGQKHCGADDCKNQ 419
Query: 173 ARLLSVIMRRGFKFS 187
A + +++RG+ F+
Sbjct: 420 ALVAIELLKRGYSFT 434
>gi|354557639|ref|ZP_08976897.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
metallireducens DSM 15288]
gi|353550433|gb|EHC19870.1| Exonuclease RNase T and DNA polymerase III [Desulfitobacterium
metallireducens DSM 15288]
Length = 210
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 4 YVVIDFEATC----DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++V+DFE + K R P EIIE +V+ + + +V+P L +
Sbjct: 4 FLVVDFEFSVPRAYGKPRAWFP-EIIEVGAVLSDSLGNPTDQTYSAFVKPRIWTRLAEES 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+TGI+Q +D G+ + +L +LQ + + +V W D D +V L + C
Sbjct: 63 YAITGIRQADIDGGVDIEASLN-----ILQKMSPDKDTWLVAWGDADRKV-LGNVCEKYS 116
Query: 120 IQKPAYFNQWINLRVPFSKVF--GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P ++ +++L + K+F D + +LK A+E + G +H LDDAIN A++++
Sbjct: 117 LDYPFAWDNYLDLAEEY-KIFCKLDRKASLKRAIEENEIPQIGILHSALDDAINAAQVMA 175
Query: 178 VIMRRGF 184
+M+ G+
Sbjct: 176 WMMKNGW 182
>gi|343508458|ref|ZP_08745800.1| hypothetical protein VII00023_09119 [Vibrio ichthyoenteri ATCC
700023]
gi|342793772|gb|EGU29560.1| hypothetical protein VII00023_09119 [Vibrio ichthyoenteri ATCC
700023]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + V GEI+ Q YV+P + + + FC ELTGI +V+ G L E +
Sbjct: 26 EIIEIGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCVELTGITPRKVEKQGRPLAEVI- 83
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
+ G NN ++ W D ++L EC K I+ P F +++NL +
Sbjct: 84 --KSMIKNFGGNNKIYA--AWGRDD--LVLAQECAAKGIEMP--FKEYVNLATIYRIQNR 135
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ R K A E G+ W+GR H G DA N+A+L
Sbjct: 136 LKEKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKL 171
>gi|91223788|ref|ZP_01259052.1| hypothetical protein V12G01_18627 [Vibrio alginolyticus 12G01]
gi|91191280|gb|EAS77545.1| hypothetical protein V12G01_18627 [Vibrio alginolyticus 12G01]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L + G N F+ +W D ++L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMVKNFGGRNKIFA--SWGRDD--LILLEECKQKGIEA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P F ++INL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIDWEGRQHSGYVDAYNLAKL 171
>gi|27365643|ref|NP_761171.1| hypothetical protein VV1_2322 [Vibrio vulnificus CMCP6]
gi|37680205|ref|NP_934814.1| hypothetical protein VV2021 [Vibrio vulnificus YJ016]
gi|320156044|ref|YP_004188423.1| hypothetical protein VVMO6_01198 [Vibrio vulnificus MO6-24/O]
gi|27361791|gb|AAO10698.1| hypothetical protein VV1_2322 [Vibrio vulnificus CMCP6]
gi|37198952|dbj|BAC94785.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
gi|319931356|gb|ADV86220.1| hypothetical protein VVMO6_01198 [Vibrio vulnificus MO6-24/O]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNEDGVGRTGEIIEIGLAEIDLLKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E + K +++ +N +W D +M EC+ K I
Sbjct: 66 GITPRKIEKQGRPLAEVI----KSMIK-NFGGSNKIYASWGRDDRILM--QECQEKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P FN++IN+ + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FNEFINIATLYRIQHRLKDKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAKL 171
>gi|424032748|ref|ZP_17772164.1| exonuclease family protein [Vibrio cholerae HENC-01]
gi|424039431|ref|ZP_17777805.1| exonuclease family protein [Vibrio cholerae HENC-02]
gi|408875358|gb|EKM14505.1| exonuclease family protein [Vibrio cholerae HENC-01]
gi|408892993|gb|EKM30325.1| exonuclease family protein [Vibrio cholerae HENC-02]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L L G N ++ +W D ++L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|399052328|ref|ZP_10741825.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Brevibacillus sp. CF112]
gi|433544122|ref|ZP_20500513.1| hypothetical protein D478_10485 [Brevibacillus agri BAB-2500]
gi|398049813|gb|EJL42213.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Brevibacillus sp. CF112]
gi|432184601|gb|ELK42111.1| hypothetical protein D478_10485 [Brevibacillus agri BAB-2500]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
+V D E T +R+ P EIIE + VV+G +G + FQ Y P E +T+ ++
Sbjct: 4 IVYDLETTLTHQRDKIP-EIIEIGAAKVVTGKNGVEVDTFQRYTFPAIERRITERTRKFI 62
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ + + I +A D +L +G + ++ + +W D ++M+E R
Sbjct: 63 GLDKENMPTFIPFRKAF---DAFLDWIG-TDEDYYLCSWGQDDKRLMIEHCARFG--LDF 116
Query: 124 AYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ + +++ S + D + +LK+A++ AG++ +GR+H L DAI+ A LL
Sbjct: 117 NWLRNYNDIQPAISMLLADRKQMSLKDAIDAAGIVQEGRLHSALVDAIHTAHLL------ 170
Query: 183 GFKFSITKSL---TPQANPN 199
K++ T L TP+ N N
Sbjct: 171 -IKYNKTVHLSQNTPEQNYN 189
>gi|28898216|ref|NP_797821.1| hypothetical protein VP1442 [Vibrio parahaemolyticus RIMD 2210633]
gi|153836508|ref|ZP_01989175.1| exonuclease KapD [Vibrio parahaemolyticus AQ3810]
gi|260361750|ref|ZP_05774777.1| exonuclease KapD [Vibrio parahaemolyticus K5030]
gi|260878557|ref|ZP_05890912.1| exonuclease KapD [Vibrio parahaemolyticus AN-5034]
gi|260898982|ref|ZP_05907423.1| exonuclease KapD [Vibrio parahaemolyticus Peru-466]
gi|260902016|ref|ZP_05910411.1| exonuclease KapD [Vibrio parahaemolyticus AQ4037]
gi|417319801|ref|ZP_12106350.1| hypothetical protein VP10329_13955 [Vibrio parahaemolyticus 10329]
gi|433657634|ref|YP_007275013.1| hypothetical protein VPBB_1353 [Vibrio parahaemolyticus BB22OP]
gi|28806433|dbj|BAC59705.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149750106|gb|EDM60851.1| exonuclease KapD [Vibrio parahaemolyticus AQ3810]
gi|308087959|gb|EFO37654.1| exonuclease KapD [Vibrio parahaemolyticus Peru-466]
gi|308091327|gb|EFO41022.1| exonuclease KapD [Vibrio parahaemolyticus AN-5034]
gi|308107728|gb|EFO45268.1| exonuclease KapD [Vibrio parahaemolyticus AQ4037]
gi|308113624|gb|EFO51164.1| exonuclease KapD [Vibrio parahaemolyticus K5030]
gi|328473772|gb|EGF44607.1| hypothetical protein VP10329_13955 [Vibrio parahaemolyticus 10329]
gi|432508322|gb|AGB09839.1| hypothetical protein VPBB_1353 [Vibrio parahaemolyticus BB22OP]
Length = 176
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E + + G N ++ +W D V+L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLAEVI---KSMIKNFGGRNKIYA--SWGRDD--VILLEECKQKGIEA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R + A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIEWEGRQHSGYVDAHNLAKLALTML 176
>gi|308174838|ref|YP_003921543.1| exoribonuclease (3'-5') [Bacillus amyloliquefaciens DSM 7]
gi|307607702|emb|CBI44073.1| putative exoribonuclease (3'-5') [Bacillus amyloliquefaciens DSM 7]
Length = 232
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSG----VSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + PQ FP ++ +G V E+ F +Y++P LT CK
Sbjct: 34 LIIDFEFTM-PDGKYSPQNF--FPEIIEAGIVKTVDDEVAETFSSYIKPKKFRKLTKRCK 90
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD GIT E + + L ++ + N ++VTW + D +V L+ C I
Sbjct: 91 TFLNITQEDVDGGITFNEFI----RKLNELD-PDKNCTIVTWGNMDMKV-LKQNCMFNHI 144
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L ++
Sbjct: 145 PFP-FKGELRDLSLEYKNFFGDRTLTGLWKAAEEYGDKGTGTHHKALDDAMTTHKLFKLV 203
Query: 180 MR 181
R
Sbjct: 204 ER 205
>gi|120553141|ref|YP_957492.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120322990|gb|ABM17305.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 227
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 5 VVIDFEATCDKER---NLHPQ-----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
++ID EATC + R N Q EIIE ++ G ++ VRPT P+L+
Sbjct: 33 LIIDLEATCWEHRQAPNGEAQSNDNMEIIEI-GCALATRQGRLLDTRSFLVRPTRHPVLS 91
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
+FC LT I Q VD A+ + WL G +F +W ++D ++ LE++ +
Sbjct: 92 EFCTGLTSITQEMVDEAPAFPGAIQAMNAWL---GDLPDDFIWCSWGNYD-RLHLEAQSQ 147
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ +NL+ + + G R N A+ L ++G H G+DDA N+ R+
Sbjct: 148 EHDARPAVLAFPHLNLKRIWRRTTGQKRKNGFAHALAFHDLAFEGHHHRGVDDARNMVRV 207
Query: 176 L 176
L
Sbjct: 208 L 208
>gi|323497579|ref|ZP_08102596.1| hypothetical protein VISI1226_22170 [Vibrio sinaloensis DSM 21326]
gi|323317328|gb|EGA70322.1| hypothetical protein VISI1226_22170 [Vibrio sinaloensis DSM 21326]
Length = 176
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEVGLAEIDLAKGEIVKRAQYYVKPENDEV-SMFCVELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L + G +N F+ +W D ++L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMVKNFGGSNKIFA--SWGRDD--LVLAQECQDKGIEM 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P F ++INL + D R K A E G+ W+GR H G DA N+A+L
Sbjct: 119 P--FKEFINLATLYRIQNRLKDKRIGHKAAQESKGIEWEGRQHSGYVDAYNLAKL 171
>gi|153831795|ref|ZP_01984462.1| exonuclease KapD [Vibrio harveyi HY01]
gi|156974798|ref|YP_001445705.1| hypothetical protein VIBHAR_02516 [Vibrio harveyi ATCC BAA-1116]
gi|388602338|ref|ZP_10160734.1| hypothetical protein VcamD_20896 [Vibrio campbellii DS40M4]
gi|148871793|gb|EDL70616.1| exonuclease KapD [Vibrio harveyi HY01]
gi|156526392|gb|ABU71478.1| hypothetical protein VIBHAR_02516 [Vibrio harveyi ATCC BAA-1116]
Length = 176
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L L G N ++ +W D ++L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|229087422|ref|ZP_04219556.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-44]
gi|228695844|gb|EEL48695.1| Sporulation inhibitor KapD [Bacillus cereus Rock3-44]
Length = 207
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE T + R P+ EIIE +VS V+ + + +YVRP LT+ C
Sbjct: 6 FIFLDFEFTMPQNRK-KPKGFFPEIIEVG--LVSVVNCVVEDTYASYVRPETFSCLTERC 62
Query: 60 KELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
K+ GI+Q VD GI+ L E L ++K ++VTW + D +V L+ C
Sbjct: 63 KKFLGIKQEAVDGGISFLELVEKLAQYEK--------RCQTTIVTWGNMDMKV-LKHNCE 113
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ P + + +L + + + FG+ + L +A+E G + G+ HC LDDA+ +
Sbjct: 114 AVGVTFP-FSGECRDLSLEYKRFFGERNQTGLWKAIEAYGKVGTGKHHCALDDAMTTYNI 172
Query: 176 LSVIMR 181
++ +
Sbjct: 173 FKLVEK 178
>gi|2231221|gb|AAB61982.1| KapD [Bacillus subtilis subsp. subtilis str. 168]
Length = 205
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKER----NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T + N P EIIE + +V + E++ F +YVRP P LT CK
Sbjct: 7 LIIDFEFTMPDGKYSPQNFFP-EIIE--AGIVKSIDDEVVETFSSYVRPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q QVD G+ + + + L ++ N +++TW + D +V L+ C I
Sbjct: 64 SFLKITQKQVDEGMRFEDFI----RKLNELD-PEKNSTIITWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H DDA+ +L ++
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDSGTGTHHKAHDDALTAYKLFKLV 176
>gi|428207633|ref|YP_007091986.1| Exonuclease RNase T and DNA polymerase III [Chroococcidiopsis
thermalis PCC 7203]
gi|428009554|gb|AFY88117.1| Exonuclease RNase T and DNA polymerase III [Chroococcidiopsis
thermalis PCC 7203]
Length = 192
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 2 EYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ +VID E+TC DK EIIE V SG+ + V+P + +++FC
Sbjct: 6 DRIIVIDIESTCWQDKPPIGQESEIIEIGICTVDVASGKRLEKESILVKPE-KSQVSEFC 64
Query: 60 KELTGIQQHQVDNGITLGEA-LYFHDKWLLQMGLNNTNFSVVTWSDW--DCQVMLESECR 116
+LT + Q QV+ GI+L EA +K+ Q + W+ + D + E +C+
Sbjct: 65 TQLTTLTQAQVERGISLKEACTILKNKYQSQQRI---------WASFGDDDRRQFEKQCQ 115
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
KKI P + ++ IN++ F+ + + EA+E +G H G DDA NIA +
Sbjct: 116 SKKINYP-FGSRHINVKTLFAVIHALPNEIGMAEALEKLNFPLEGTHHRGGDDAWNIALI 174
Query: 176 LSVIM 180
LS ++
Sbjct: 175 LSELL 179
>gi|350531081|ref|ZP_08910022.1| hypothetical protein VrotD_08162 [Vibrio rotiferianus DAT722]
Length = 176
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCVELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L L G N ++ +W D ++L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHKAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|260768515|ref|ZP_05877449.1| hypothetical protein VFA_001567 [Vibrio furnissii CIP 102972]
gi|375131053|ref|YP_004993153.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|260616545|gb|EEX41730.1| hypothetical protein VFA_001567 [Vibrio furnissii CIP 102972]
gi|315180227|gb|ADT87141.1| hypothetical protein vfu_A01985 [Vibrio furnissii NCTC 11218]
Length = 156
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EIIE + +GEI+ Q YV+P + + + FC ELTGI +++ G L
Sbjct: 6 EIIEVGLAEIDLTAGEIVKRAQYYVKPEHDEV-SLFCVELTGITPRKIEK---QGRPL-- 59
Query: 83 HDKWLLQMGLNNTNFSVVTWSDW--DCQVMLESECRIKKIQKPAYFNQWINLRVPF--SK 138
++Q + N S ++ W D Q++++ EC+ K I P F ++INL +
Sbjct: 60 --AAVIQSMVKNFGGSQKIYASWGRDDQILMK-ECQAKGIDMP--FKEFINLATLYRIQH 114
Query: 139 VFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 115 RLKDKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAKL 151
>gi|262394326|ref|YP_003286180.1| hypothetical protein VEA_003555 [Vibrio sp. Ex25]
gi|451972281|ref|ZP_21925491.1| hypothetical protein C408_2103 [Vibrio alginolyticus E0666]
gi|262337920|gb|ACY51715.1| hypothetical protein VEA_003555 [Vibrio sp. Ex25]
gi|451931791|gb|EMD79475.1| hypothetical protein C408_2103 [Vibrio alginolyticus E0666]
Length = 176
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGSTGEIIEVGLAEIDLSRGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L K N +W D ++L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLEEVLKSMVK-----NFGGRNKIYASWGRDD--LILLEECKQKGIEA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R + A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKDKRIGHRAAQEAKGIDWEGRQHSGYVDAYNLAKLALTML 176
>gi|163753221|ref|ZP_02160345.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
gi|161326953|gb|EDP98278.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
Length = 182
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 5 VVIDFEATCDKER--NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++D EATC E N EIIE V++ + EI ++P + ++FC EL
Sbjct: 8 IIVDLEATCWNEPIPNGQVNEIIEIGICVLNTETSEITQNEGILIKPERSEI-SEFCTEL 66
Query: 63 TGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
T I Q +D GI+ EA L++ N ++ ++ +D ML+ +C+++ ++
Sbjct: 67 TTITQELIDTEGISFVEACTK-----LRVEYNPKQYTWASYGQYDLN-MLKRQCKLRNVE 120
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P + IN++ F++V G + + A+ + + +G H G+DDA NIA++L
Sbjct: 121 YP-MGQEHINVKTTFTEVKGLRKKVGMNGALNILKIPLEGTHHRGVDDAKNIAKILD 176
>gi|343497491|ref|ZP_08735557.1| hypothetical protein VINI7043_25482 [Vibrio nigripulchritudo ATCC
27043]
gi|342818231|gb|EGU53100.1| hypothetical protein VINI7043_25482 [Vibrio nigripulchritudo ATCC
27043]
Length = 176
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + GE++ Q YV+P + + + FC ELTGI +++ G L + +
Sbjct: 26 EIIEVGLAEIDLQKGEVVKRAQYYVKPEQDEI-SLFCSELTGITPRKIEKQGRPLADVIQ 84
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K N +W D ++L++EC K+I P F ++INL +
Sbjct: 85 SMVK-----NFGGANKIYASWGRDD--LILKAECESKEIDLP--FKEFINLATLYRVQNR 135
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
D R K A E G+ W+GR H G DA N+A+L V++
Sbjct: 136 LKDKRIGHKAAQEEKGIEWEGRQHSGFVDAYNLAKLALVML 176
>gi|254508126|ref|ZP_05120252.1| exonuclease KapD [Vibrio parahaemolyticus 16]
gi|219548961|gb|EED25960.1| exonuclease KapD [Vibrio parahaemolyticus 16]
Length = 164
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + V GEI+ Q YV+P + + + FC ELTGI +V+ G L E L
Sbjct: 14 EIIEVGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCVELTGITPRKVEKQGRPLEEVLK 72
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K G +N F+ +W D V+L EC K I+ P F ++INL +
Sbjct: 73 SVVK---NFGGSNKIFA--SWGRDD--VVLAKECEAKGIEMP--FKEFINLATLYRIQNR 123
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
D R + A E G+ W+GR H DA N+A+L ++
Sbjct: 124 LKDKRIGHRAAQESKGIEWEGRQHSAYVDAYNLAKLALTML 164
>gi|375307349|ref|ZP_09772638.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus sp. Aloe-11]
gi|375080694|gb|EHS58913.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus sp. Aloe-11]
Length = 223
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIA-CFQTYVRPTFEPLLTDFCKE 61
Y++ D E T + + EII+ +V VV G G +A F ++VRP+ P+L+ +
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLSTDTVQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q +D EA+ WL ++ + + W D Q ++ S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVEQFVAWL----GTDSPYYLCAWGPDDRQKLV-SHCRTHHVD 116
Query: 122 KPAYFNQWINLRVPFSKVFGDV----RCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ + +++ S++FG + +L +A+EL + + G+ H LDDAIN A++
Sbjct: 117 L-GWIHNTNDIQKQISRLFGSSGKYRQLSLSQALELCHIDFDGQQHRALDDAINTAQVFM 175
Query: 178 VIMRR 182
+ R
Sbjct: 176 HLFDR 180
>gi|443896564|dbj|GAC73908.1| hypothetical protein PANT_9d00324 [Pseudozyma antarctica T-34]
Length = 508
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 1 FEYYVVIDFEATCD---KERNL----------HPQEIIEFPSVVVSGVSGE----IIACF 43
F+ ++V+D EATC+ K RNL +P EIIE P V++ E F
Sbjct: 60 FDAFLVLDVEATCESTRKYRNLEHGYETGCFQYPNEIIELPVVLLRWNKDERRLDTAGVF 119
Query: 44 QTYVRPTFEPLLTDFCKELTGIQQHQVDNGIT 75
++VRPTF P LT FC++LTG+ Q +D T
Sbjct: 120 HSFVRPTFRPQLTQFCRDLTGVTQAHIDAAPT 151
>gi|428215737|ref|YP_007088881.1| exonuclease [Oscillatoria acuminata PCC 6304]
gi|428004118|gb|AFY84961.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Oscillatoria acuminata PCC 6304]
Length = 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 1 FEYYVVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ +V+D EATC D N +EIIE + SGE++ V+P + +++
Sbjct: 5 LDRIIVVDIEATCWEKDPPPN-QEREIIEIGICPLEIASGELLEKESILVKPK-QSQVSE 62
Query: 58 FCKELTGIQQHQVDNGITLGEA-LYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
FC +LT + QV+ G++LG++ +K++ + ++ ++D + + EC
Sbjct: 63 FCTQLTTLTPAQVNQGVSLGQSCSILRNKYISHQRI------WASYGEFD-KRQFQVECE 115
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
K ++ P + N+ +N++ FS ++ + + A+E L +G H G DDA NIAR+
Sbjct: 116 KKGVRYP-FSNRHLNVKTLFSVMYALEKEVGMAGALEHLNLPLEGTHHRGHDDAWNIARI 174
Query: 176 LSVIM 180
LS ++
Sbjct: 175 LSQLI 179
>gi|269963670|ref|ZP_06177992.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|424043321|ref|ZP_17780959.1| exonuclease family protein [Vibrio cholerae HENC-03]
gi|269831582|gb|EEZ85719.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408889271|gb|EKM27696.1| exonuclease family protein [Vibrio cholerae HENC-03]
Length = 176
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEHDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L L G N ++ +W D ++L EC+ K I
Sbjct: 66 GITPRKIEKQGRPLEEVL---KSMLKNFGGRNKIYA--SWGRDD--LILLEECQQKGIDA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + + R + A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKEKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|300119688|ref|ZP_07057228.1| sporulation inhibitor KapD [Bacillus cereus SJ1]
gi|298722916|gb|EFI63818.1| sporulation inhibitor KapD [Bacillus cereus SJ1]
Length = 158
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 47 VRPTFEPLLTDFCKELTGIQQHQVDNGIT---LGEALYFHDKWLLQMGLNNTNFSVVTWS 103
+RP P LTD CK+ GI+Q VD GI+ L E L ++K ++VTW
Sbjct: 1 MRPKTFPSLTDRCKKFLGIKQEVVDKGISFLELVEKLAEYEK--------KCKPTIVTWG 52
Query: 104 DWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRV 162
+ D +V L+ C ++ P + Q +L + + K FG+ + L +A+E G + G+
Sbjct: 53 NMDMKV-LKHNCEKAEVDFP-FLGQCRDLSLEYKKFFGERNQTGLWKAIEAYGKVGTGKH 110
Query: 163 HCGLDDAINIARLLSVIMR 181
HC LDDA+ + ++ +
Sbjct: 111 HCALDDAMTTYNIFKLVEK 129
>gi|388855258|emb|CCF51152.1| uncharacterized protein [Ustilago hordei]
Length = 460
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 17/88 (19%)
Query: 1 FEYYVVIDFEATCD---KERNL----------HPQEIIEFPSVVV----SGVSGEIIACF 43
F+ ++V+D EATC+ K RN+ +P EIIEFP V++ E F
Sbjct: 64 FDTFLVLDVEATCEATRKYRNINHGFETGCFQYPNEIIEFPVVLLKWNKDSQQLETTGIF 123
Query: 44 QTYVRPTFEPLLTDFCKELTGIQQHQVD 71
+YVRPTF P L FC++LTG+ Q Q +
Sbjct: 124 HSYVRPTFRPKLAKFCRDLTGVTQAQAN 151
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 7/37 (18%)
Query: 153 LAGLI-------WQGRVHCGLDDAINIARLLSVIMRR 182
LAGL+ +QGR HCGLDD NIARL I RR
Sbjct: 306 LAGLLEVMNIGPFQGRQHCGLDDTKNIARLAVEIARR 342
>gi|15641389|ref|NP_231021.1| hypothetical protein VC1377 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588011|ref|ZP_01677763.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121728525|ref|ZP_01681548.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675170|ref|YP_001216938.1| hypothetical protein VC0395_A0992 [Vibrio cholerae O395]
gi|153212725|ref|ZP_01948382.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153817774|ref|ZP_01970441.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821312|ref|ZP_01973979.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825269|ref|ZP_01977936.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828771|ref|ZP_01981438.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|183179375|ref|ZP_02957586.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|227081548|ref|YP_002810099.1| hypothetical protein VCM66_1332 [Vibrio cholerae M66-2]
gi|227117842|ref|YP_002819738.1| hypothetical protein VC395_1496 [Vibrio cholerae O395]
gi|229505042|ref|ZP_04394552.1| hypothetical protein VCF_000248 [Vibrio cholerae BX 330286]
gi|229511288|ref|ZP_04400767.1| hypothetical protein VCE_002695 [Vibrio cholerae B33]
gi|229515749|ref|ZP_04405208.1| hypothetical protein VCB_003407 [Vibrio cholerae TMA 21]
gi|229518406|ref|ZP_04407850.1| hypothetical protein VCC_002430 [Vibrio cholerae RC9]
gi|229521489|ref|ZP_04410908.1| hypothetical protein VIF_002026 [Vibrio cholerae TM 11079-80]
gi|229529547|ref|ZP_04418937.1| hypothetical protein VCG_002642 [Vibrio cholerae 12129(1)]
gi|229608046|ref|YP_002878694.1| hypothetical protein VCD_002964 [Vibrio cholerae MJ-1236]
gi|254225334|ref|ZP_04918946.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254286171|ref|ZP_04961131.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848499|ref|ZP_05237849.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297578962|ref|ZP_06940890.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298498539|ref|ZP_07008346.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360035273|ref|YP_004937036.1| hypothetical protein Vch1786_I0878 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741178|ref|YP_005333147.1| hypothetical protein O3Y_06405 [Vibrio cholerae IEC224]
gi|384424494|ref|YP_005633852.1| hypothetical protein VCLMA_A1213 [Vibrio cholerae LMA3984-4]
gi|417813394|ref|ZP_12460051.1| exonuclease family protein [Vibrio cholerae HC-49A2]
gi|417816258|ref|ZP_12462890.1| exonuclease family protein [Vibrio cholerae HCUF01]
gi|418337149|ref|ZP_12946047.1| exonuclease family protein [Vibrio cholerae HC-23A1]
gi|418343664|ref|ZP_12950448.1| exonuclease family protein [Vibrio cholerae HC-28A1]
gi|418354754|ref|ZP_12957475.1| exonuclease family protein [Vibrio cholerae HC-61A1]
gi|419825861|ref|ZP_14349365.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|421316526|ref|ZP_15767097.1| exonuclease family protein [Vibrio cholerae CP1032(5)]
gi|421328638|ref|ZP_15779152.1| exonuclease family protein [Vibrio cholerae CP1042(15)]
gi|421331662|ref|ZP_15782142.1| exonuclease family protein [Vibrio cholerae CP1046(19)]
gi|421347399|ref|ZP_15797781.1| exonuclease family protein [Vibrio cholerae HC-46A1]
gi|421354144|ref|ZP_15804476.1| exonuclease family protein [Vibrio cholerae HE-45]
gi|422891483|ref|ZP_16933861.1| exonuclease family protein [Vibrio cholerae HC-40A1]
gi|422902695|ref|ZP_16937691.1| exonuclease family protein [Vibrio cholerae HC-48A1]
gi|422906573|ref|ZP_16941403.1| exonuclease family protein [Vibrio cholerae HC-70A1]
gi|422910488|ref|ZP_16945127.1| exonuclease family protein [Vibrio cholerae HE-09]
gi|422913156|ref|ZP_16947675.1| exonuclease family protein [Vibrio cholerae HFU-02]
gi|422922689|ref|ZP_16955868.1| exonuclease family protein [Vibrio cholerae BJG-01]
gi|422925636|ref|ZP_16958661.1| exonuclease family protein [Vibrio cholerae HC-38A1]
gi|423144958|ref|ZP_17132567.1| exonuclease family protein [Vibrio cholerae HC-19A1]
gi|423149637|ref|ZP_17136965.1| exonuclease family protein [Vibrio cholerae HC-21A1]
gi|423156264|ref|ZP_17143368.1| exonuclease family protein [Vibrio cholerae HC-32A1]
gi|423160089|ref|ZP_17147057.1| exonuclease family protein [Vibrio cholerae HC-33A2]
gi|423164812|ref|ZP_17151567.1| exonuclease family protein [Vibrio cholerae HC-48B2]
gi|423755846|ref|ZP_17712267.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|423880556|ref|ZP_17723452.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|423892630|ref|ZP_17726313.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|423927408|ref|ZP_17730930.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|424001956|ref|ZP_17745042.1| exonuclease family protein [Vibrio cholerae HC-17A2]
gi|424006114|ref|ZP_17749094.1| exonuclease family protein [Vibrio cholerae HC-37A1]
gi|424024132|ref|ZP_17763792.1| exonuclease family protein [Vibrio cholerae HC-62B1]
gi|424026982|ref|ZP_17766595.1| exonuclease family protein [Vibrio cholerae HC-69A1]
gi|424586255|ref|ZP_18025844.1| exonuclease family protein [Vibrio cholerae CP1030(3)]
gi|424594956|ref|ZP_18034289.1| exonuclease family protein [Vibrio cholerae CP1040(13)]
gi|424598822|ref|ZP_18038015.1| exonuclease family protein [Vibrio Cholerae CP1044(17)]
gi|424601560|ref|ZP_18040712.1| exonuclease family protein [Vibrio cholerae CP1047(20)]
gi|424606552|ref|ZP_18045512.1| exonuclease family protein [Vibrio cholerae CP1050(23)]
gi|424610382|ref|ZP_18049236.1| exonuclease family protein [Vibrio cholerae HC-39A1]
gi|424617003|ref|ZP_18055690.1| exonuclease family protein [Vibrio cholerae HC-42A1]
gi|424633267|ref|ZP_18071377.1| exonuclease family protein [Vibrio cholerae HC-52A1]
gi|424648328|ref|ZP_18085998.1| exonuclease family protein [Vibrio cholerae HC-57A1]
gi|424652607|ref|ZP_18090083.1| exonuclease family protein [Vibrio cholerae HC-57A2]
gi|424656511|ref|ZP_18093809.1| exonuclease family protein [Vibrio cholerae HC-81A2]
gi|429887192|ref|ZP_19368717.1| hypothetical protein OSU_2328 [Vibrio cholerae PS15]
gi|440709633|ref|ZP_20890290.1| hypothetical protein VC4260B_10350 [Vibrio cholerae 4260B]
gi|443503464|ref|ZP_21070443.1| exonuclease family protein [Vibrio cholerae HC-64A1]
gi|443507365|ref|ZP_21074149.1| exonuclease family protein [Vibrio cholerae HC-65A1]
gi|443511492|ref|ZP_21078147.1| exonuclease family protein [Vibrio cholerae HC-67A1]
gi|443515047|ref|ZP_21081574.1| exonuclease family protein [Vibrio cholerae HC-68A1]
gi|443518845|ref|ZP_21085255.1| exonuclease family protein [Vibrio cholerae HC-71A1]
gi|443523735|ref|ZP_21089962.1| exonuclease family protein [Vibrio cholerae HC-72A2]
gi|443535122|ref|ZP_21101015.1| exonuclease family protein [Vibrio cholerae HC-80A1]
gi|443538689|ref|ZP_21104544.1| exonuclease family protein [Vibrio cholerae HC-81A1]
gi|449056137|ref|ZP_21734805.1| Hypothetical protein B839_22370 [Vibrio cholerae O1 str. Inaba
G4222]
gi|9655872|gb|AAF94535.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547752|gb|EAX57843.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121629189|gb|EAX61629.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124116375|gb|EAY35195.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|125622175|gb|EAZ50497.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126511712|gb|EAZ74306.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521130|gb|EAZ78353.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146317053|gb|ABQ21592.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|148875724|gb|EDL73859.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149741097|gb|EDM55156.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423840|gb|EDN15781.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|183012786|gb|EDT88086.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|227009436|gb|ACP05648.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227013292|gb|ACP09502.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229333321|gb|EEN98807.1| hypothetical protein VCG_002642 [Vibrio cholerae 12129(1)]
gi|229341587|gb|EEO06590.1| hypothetical protein VIF_002026 [Vibrio cholerae TM 11079-80]
gi|229345121|gb|EEO10095.1| hypothetical protein VCC_002430 [Vibrio cholerae RC9]
gi|229347518|gb|EEO12478.1| hypothetical protein VCB_003407 [Vibrio cholerae TMA 21]
gi|229351253|gb|EEO16194.1| hypothetical protein VCE_002695 [Vibrio cholerae B33]
gi|229357265|gb|EEO22182.1| hypothetical protein VCF_000248 [Vibrio cholerae BX 330286]
gi|229370701|gb|ACQ61124.1| hypothetical protein VCD_002964 [Vibrio cholerae MJ-1236]
gi|254844204|gb|EET22618.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297536556|gb|EFH75389.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297542872|gb|EFH78922.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327484047|gb|AEA78454.1| hypothetical protein VCLMA_A1213 [Vibrio cholerae LMA3984-4]
gi|340041984|gb|EGR02950.1| exonuclease family protein [Vibrio cholerae HCUF01]
gi|340042698|gb|EGR03663.1| exonuclease family protein [Vibrio cholerae HC-49A2]
gi|341623308|gb|EGS48850.1| exonuclease family protein [Vibrio cholerae HC-48A1]
gi|341623471|gb|EGS49004.1| exonuclease family protein [Vibrio cholerae HC-70A1]
gi|341624531|gb|EGS50023.1| exonuclease family protein [Vibrio cholerae HC-40A1]
gi|341633406|gb|EGS58214.1| exonuclease family protein [Vibrio cholerae HE-09]
gi|341639593|gb|EGS64210.1| exonuclease family protein [Vibrio cholerae HFU-02]
gi|341645177|gb|EGS69327.1| exonuclease family protein [Vibrio cholerae BJG-01]
gi|341647218|gb|EGS71304.1| exonuclease family protein [Vibrio cholerae HC-38A1]
gi|356419653|gb|EHH73198.1| exonuclease family protein [Vibrio cholerae HC-21A1]
gi|356424701|gb|EHH78100.1| exonuclease family protein [Vibrio cholerae HC-19A1]
gi|356432727|gb|EHH85924.1| exonuclease family protein [Vibrio cholerae HC-23A1]
gi|356436078|gb|EHH89205.1| exonuclease family protein [Vibrio cholerae HC-28A1]
gi|356441938|gb|EHH94814.1| exonuclease family protein [Vibrio cholerae HC-32A1]
gi|356448545|gb|EHI01309.1| exonuclease family protein [Vibrio cholerae HC-33A2]
gi|356453156|gb|EHI05819.1| exonuclease family protein [Vibrio cholerae HC-61A1]
gi|356454337|gb|EHI06985.1| exonuclease family protein [Vibrio cholerae HC-48B2]
gi|356646427|gb|AET26482.1| conserved hypothetical protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794688|gb|AFC58159.1| hypothetical protein O3Y_06405 [Vibrio cholerae IEC224]
gi|395921483|gb|EJH32303.1| exonuclease family protein [Vibrio cholerae CP1032(5)]
gi|395930144|gb|EJH40893.1| exonuclease family protein [Vibrio cholerae CP1042(15)]
gi|395932926|gb|EJH43669.1| exonuclease family protein [Vibrio cholerae CP1046(19)]
gi|395946459|gb|EJH57123.1| exonuclease family protein [Vibrio cholerae HC-46A1]
gi|395953269|gb|EJH63882.1| exonuclease family protein [Vibrio cholerae HE-45]
gi|395961538|gb|EJH71861.1| exonuclease family protein [Vibrio cholerae HC-57A2]
gi|395964714|gb|EJH74913.1| exonuclease family protein [Vibrio cholerae HC-42A1]
gi|395975649|gb|EJH85133.1| exonuclease family protein [Vibrio cholerae CP1030(3)]
gi|395977336|gb|EJH86747.1| exonuclease family protein [Vibrio cholerae CP1047(20)]
gi|408008249|gb|EKG46253.1| exonuclease family protein [Vibrio cholerae HC-39A1]
gi|408019658|gb|EKG57050.1| exonuclease family protein [Vibrio cholerae HC-52A1]
gi|408034206|gb|EKG70712.1| exonuclease family protein [Vibrio cholerae CP1040(13)]
gi|408034702|gb|EKG71189.1| exonuclease family protein [Vibrio cholerae HC-57A1]
gi|408043425|gb|EKG79421.1| exonuclease family protein [Vibrio Cholerae CP1044(17)]
gi|408044755|gb|EKG80647.1| exonuclease family protein [Vibrio cholerae CP1050(23)]
gi|408055399|gb|EKG90331.1| exonuclease family protein [Vibrio cholerae HC-81A2]
gi|408609942|gb|EKK83318.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|408638177|gb|EKL10125.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|408642893|gb|EKL14637.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|408656267|gb|EKL27364.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|408657542|gb|EKL28621.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|408846863|gb|EKL86942.1| exonuclease family protein [Vibrio cholerae HC-37A1]
gi|408848039|gb|EKL88094.1| exonuclease family protein [Vibrio cholerae HC-17A2]
gi|408871516|gb|EKM10753.1| exonuclease family protein [Vibrio cholerae HC-62B1]
gi|408879873|gb|EKM18816.1| exonuclease family protein [Vibrio cholerae HC-69A1]
gi|429225844|gb|EKY32042.1| hypothetical protein OSU_2328 [Vibrio cholerae PS15]
gi|439975222|gb|ELP51358.1| hypothetical protein VC4260B_10350 [Vibrio cholerae 4260B]
gi|443432196|gb|ELS74727.1| exonuclease family protein [Vibrio cholerae HC-64A1]
gi|443436398|gb|ELS82521.1| exonuclease family protein [Vibrio cholerae HC-65A1]
gi|443439667|gb|ELS89365.1| exonuclease family protein [Vibrio cholerae HC-67A1]
gi|443443689|gb|ELS96975.1| exonuclease family protein [Vibrio cholerae HC-68A1]
gi|443447894|gb|ELT04536.1| exonuclease family protein [Vibrio cholerae HC-71A1]
gi|443450286|gb|ELT10563.1| exonuclease family protein [Vibrio cholerae HC-72A2]
gi|443461737|gb|ELT32795.1| exonuclease family protein [Vibrio cholerae HC-80A1]
gi|443466278|gb|ELT40937.1| exonuclease family protein [Vibrio cholerae HC-81A1]
gi|448263960|gb|EMB01199.1| Hypothetical protein B839_22370 [Vibrio cholerae O1 str. Inaba
G4222]
Length = 176
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + +GEI+ Q +V+P + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L E + K +N +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVIQSMVK-----NFGGSNKIYASWGRDD--LILLNECREK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKLA 172
Query: 177 SVIM 180
++
Sbjct: 173 LTML 176
>gi|417820797|ref|ZP_12467411.1| exonuclease family protein [Vibrio cholerae HE39]
gi|423952563|ref|ZP_17734277.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|340038428|gb|EGQ99402.1| exonuclease family protein [Vibrio cholerae HE39]
gi|408659997|gb|EKL31028.1| exonuclease family protein [Vibrio cholerae HE-40]
Length = 176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + +GEI+ Q +V+P + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLTAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L E + K +N +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVIQSMVK-----NFGGSNKIYASWGRDD--LILLNECREK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKLA 172
Query: 177 SVIM 180
++
Sbjct: 173 LTML 176
>gi|59712121|ref|YP_204897.1| exonuclease KapD [Vibrio fischeri ES114]
gi|197336268|ref|YP_002156326.1| exonuclease KapD [Vibrio fischeri MJ11]
gi|423686277|ref|ZP_17661085.1| exonuclease KapD [Vibrio fischeri SR5]
gi|59480222|gb|AAW86009.1| exonuclease KapD [Vibrio fischeri ES114]
gi|197317758|gb|ACH67205.1| exonuclease KapD [Vibrio fischeri MJ11]
gi|371494345|gb|EHN69943.1| exonuclease KapD [Vibrio fischeri SR5]
Length = 176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F V D E C ++ EIIE + GE++ Q YV+P + + + FC
Sbjct: 3 FNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLTKGEVVKRAQYYVKPEKDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+LTGI +++ G L + L K TN W D Q+ LE+EC+ K
Sbjct: 62 VDLTGISPRKIEKQGRPLADVLKSMVK-----NFGGTNKIYAAWGH-DEQI-LEAECKAK 114
Query: 119 KIQKPAYFNQWINL----RVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
I+ P FN+++NL R+ K + R + A+E + W+GR H G DA N+A+
Sbjct: 115 GIEVP--FNEFLNLATIYRIRSRK--KNERMGQRRAMEELNIEWEGRQHSGYVDAYNLAQ 170
Query: 175 LLSVIM 180
L I+
Sbjct: 171 LALKIL 176
>gi|375265428|ref|YP_005022871.1| hypothetical protein VEJY3_07015 [Vibrio sp. EJY3]
gi|369840749|gb|AEX21893.1| hypothetical protein VEJY3_07015 [Vibrio sp. EJY3]
Length = 176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + GEI+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWNENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYVKPEQDEV-SLFCAELT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L K N +W D +L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLEEVLKSMVK-----NFGGRNKIYASWGRDD--TILLDECKQKGIEA 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + + R + A E G+ W+GR H G DA N+A+L ++
Sbjct: 119 P--FTEFINLATLYRIQNRLKEKRIGHRAAQEAKGIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|194376910|dbj|BAG63016.1| unnamed protein product [Homo sapiens]
Length = 136
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 96 NFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAV--EL 153
+S++ WD L +C++ +++ P + +WIN+R + + R K + E
Sbjct: 11 KYSLLPDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEK 70
Query: 154 AGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSL 192
G+ + GR HCGLDD+ NIAR+ +++ G + I + +
Sbjct: 71 LGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKM 109
>gi|196018082|ref|XP_002118730.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
gi|190578360|gb|EDV18784.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
Length = 87
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 2 EYYVVIDFEATCDK-ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+YY VIDFEATC++ + EIIEFP+++V+ + + + F Y RP P L+ FC
Sbjct: 19 DYYCVIDFEATCEEVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRPVMNPKLSSFCT 78
Query: 61 ELTGIQQ 67
+LTGI Q
Sbjct: 79 KLTGIDQ 85
>gi|361069201|gb|AEW08912.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 154 AGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKS-LTPQANPNCLTWNRHHFLEPQ 212
AGLIW+GR H GLDDA N ARLL +MRRG K +IT S L AN + L P
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANVSTL---------PL 51
Query: 213 AMYTPPHTSL 222
M PP T +
Sbjct: 52 PMQEPPKTGV 61
>gi|260776120|ref|ZP_05885015.1| hypothetical protein VIC_001504 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607343|gb|EEX33608.1| hypothetical protein VIC_001504 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 176
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + V GEI+ Q YV+P + + + FC +LT
Sbjct: 7 VCFDLEMCCWNENGVGTTGEIIEVGLAEIDLVKGEIVKRAQYYVKPEQDEV-SLFCSQLT 65
Query: 64 GIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
GI +++ G L E L K N +W D +L EC+ K I+
Sbjct: 66 GITPRKIEKQGRPLEEVLKSMIK-----NFGGANKIYASWGRDD--RILAQECQDKGIEM 118
Query: 123 PAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P F ++INL + D R K A E + W+GR H G DA N+A+L ++
Sbjct: 119 P--FKEFINLATLYRVQHRLKDKRIGHKAAQEAQNIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|311069646|ref|YP_003974569.1| sporulation inhibitor KapD [Bacillus atrophaeus 1942]
gi|419821991|ref|ZP_14345578.1| sporulation inhibitor KapD [Bacillus atrophaeus C89]
gi|310870163|gb|ADP33638.1| sporulation inhibitor KapD [Bacillus atrophaeus 1942]
gi|388473914|gb|EIM10650.1| sporulation inhibitor KapD [Bacillus atrophaeus C89]
Length = 205
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++IDFE T E PQ EIIE + +V V ++ F +Y++P P LT CK
Sbjct: 7 LIIDFEFTM-PEGKYSPQNFFPEIIE--AGIVKSVDDAVVETFSSYIKPKKFPKLTKRCK 63
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
I Q VD G+ E + ++ Q + ++VTW + D +V L+ C I
Sbjct: 64 SFLKITQKDVDEGMKFEEFIRKLNELDPQ-----KDCTIVTWGNMDMKV-LKQNCMFNHI 117
Query: 121 QKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
P + + +L + + FGD L +A E G G H LDDA+ +L +
Sbjct: 118 PFP-FKGEMRDLSLEYKNFFGDRTLTGLWKAAEEYGDEGTGTHHKALDDALTTHKLFKRV 176
>gi|320335855|ref|YP_004172566.1| Exonuclease RNase T and DNA polymerase III [Deinococcus
maricopensis DSM 21211]
gi|319757144|gb|ADV68901.1| Exonuclease RNase T and DNA polymerase III [Deinococcus
maricopensis DSM 21211]
Length = 183
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
VID EATC EIIE VV + E + + VRP + + FC +LT
Sbjct: 7 VIDVEATCWDGPTPPGQTNEIIEVGICVVDLRTLERVDRRRVMVRPGRSEI-SAFCTDLT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI V +G+T EA +L+ L+ + +W D+D + E +C P
Sbjct: 66 GITARDVADGVTFTEACA-----ILRRELHADSRPWASWGDYD-RKQFERQCVATGTPYP 119
Query: 124 AYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRG 183
+ + N + ++ R + EA++ AGL +GR H G DDA NIA L+ ++R G
Sbjct: 120 -FSARHTNAKAQYALAHTLRRMGMAEALQHAGLPLEGRHHRGEDDAWNIAALILGLLRGG 178
>gi|421860162|ref|ZP_16292320.1| inhibitor of the KinA pathway to sporulation [Paenibacillus
popilliae ATCC 14706]
gi|410830366|dbj|GAC42757.1| inhibitor of the KinA pathway to sporulation [Paenibacillus
popilliae ATCC 14706]
Length = 222
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGE--IIACFQTYVRPTFEPLLTDFCKEL 62
++ D E T +++ EIIE +V V+ G+ I FQ +V+PT P L+
Sbjct: 4 IIYDLEMTVKRKKGEFA-EIIEIGAVKVAEQDGKAAIADTFQAFVKPTLSPKLSQDTVNF 62
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI+Q V+ L + L W ++ ++++ +W D L+ ECR+K+I
Sbjct: 63 TGIRQEDVNGSPVLQDVLDQFVAW-----IDTEDYALCSWGPDDKAQFLK-ECRMKRI-- 114
Query: 123 PAY-FNQWINLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
P + NL+ P SK+ + LK A++ + + G H LDDA N A
Sbjct: 115 PLHWLRNHNNLQKPVSKIMNRSSHQQVGLKTALDTLQVPFVGTQHRALDDAYNTA 169
>gi|424660198|ref|ZP_18097445.1| exonuclease family protein [Vibrio cholerae HE-16]
gi|408050883|gb|EKG86011.1| exonuclease family protein [Vibrio cholerae HE-16]
Length = 156
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +GEI+ Q +V+P + + + FC ELTGI +++ G L E +
Sbjct: 6 EIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVIQ 64
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K +N +W D ++L +ECR K + P F +++NL +
Sbjct: 65 SMVK-----NFGGSNKIYASWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYIDAYNLAKL 151
>gi|384485560|gb|EIE77740.1| hypothetical protein RO3G_02444 [Rhizopus delemar RA 99-880]
Length = 567
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHP---------QEIIEFPSVVVSGVSGEIIACFQTYVRPTF 51
F+ +V+ EATCD E +P EIIE VV+ + +++ Q YV+P
Sbjct: 77 FDRLIVLHVEATCD-ENTTNPAAVQVTKENSEIIELAFVVLDAHNLKVLHKKQIYVKPE- 134
Query: 52 EPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVM 110
LT FC E+TGIQ ++N TL A+ D+++ Q + +F VT W ++
Sbjct: 135 RTTLTPFCTEVTGIQWSSLENAGTLKGAIDELDQYIQQNIEEEKKSFCFVTHGGWVLRIQ 194
Query: 111 LESECRIKKIQKPAYF 126
L E R K I+ P Y
Sbjct: 195 LPRESRDKNIELPNYL 210
>gi|255745763|ref|ZP_05419711.1| hypothetical protein VCH_002127 [Vibrio cholera CIRS 101]
gi|262158958|ref|ZP_06030070.1| hypothetical protein VIG_002197 [Vibrio cholerae INDRE 91/1]
gi|262169319|ref|ZP_06037011.1| hypothetical protein VIJ_002539 [Vibrio cholerae RC27]
gi|262192375|ref|ZP_06050528.1| hypothetical protein VIH_002769 [Vibrio cholerae CT 5369-93]
gi|417824441|ref|ZP_12471032.1| exonuclease family protein [Vibrio cholerae HE48]
gi|418332406|ref|ZP_12943340.1| exonuclease family protein [Vibrio cholerae HC-06A1]
gi|418348817|ref|ZP_12953551.1| exonuclease family protein [Vibrio cholerae HC-43A1]
gi|419829940|ref|ZP_14353426.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|419832913|ref|ZP_14356375.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|419836236|ref|ZP_14359679.1| exonuclease family protein [Vibrio cholerae HC-46B1]
gi|421320984|ref|ZP_15771541.1| exonuclease family protein [Vibrio cholerae CP1038(11)]
gi|421324979|ref|ZP_15775505.1| exonuclease family protein [Vibrio cholerae CP1041(14)]
gi|421335234|ref|ZP_15785701.1| exonuclease family protein [Vibrio cholerae CP1048(21)]
gi|421339128|ref|ZP_15789563.1| exonuclease family protein [Vibrio cholerae HC-20A2]
gi|421342559|ref|ZP_15792964.1| exonuclease family protein [Vibrio cholerae HC-43B1]
gi|421351143|ref|ZP_15801508.1| exonuclease family protein [Vibrio cholerae HE-25]
gi|422307224|ref|ZP_16394390.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|422917127|ref|ZP_16951455.1| exonuclease family protein [Vibrio cholerae HC-02A1]
gi|423153451|ref|ZP_17140645.1| exonuclease family protein [Vibrio cholerae HC-22A1]
gi|423730942|ref|ZP_17704256.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|423735135|ref|ZP_17708343.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|423819800|ref|ZP_17716058.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|423853132|ref|ZP_17719850.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|423997543|ref|ZP_17740802.1| exonuclease family protein [Vibrio cholerae HC-02C1]
gi|424009067|ref|ZP_17752013.1| exonuclease family protein [Vibrio cholerae HC-44C1]
gi|424016250|ref|ZP_17756091.1| exonuclease family protein [Vibrio cholerae HC-55B2]
gi|424019191|ref|ZP_17758987.1| exonuclease family protein [Vibrio cholerae HC-59B1]
gi|424590873|ref|ZP_18030308.1| exonuclease family protein [Vibrio cholerae CP1037(10)]
gi|424613188|ref|ZP_18051991.1| exonuclease family protein [Vibrio cholerae HC-41A1]
gi|424621955|ref|ZP_18060478.1| exonuclease family protein [Vibrio cholerae HC-47A1]
gi|424624733|ref|ZP_18063205.1| exonuclease family protein [Vibrio cholerae HC-50A1]
gi|424629236|ref|ZP_18067533.1| exonuclease family protein [Vibrio cholerae HC-51A1]
gi|424636357|ref|ZP_18074372.1| exonuclease family protein [Vibrio cholerae HC-55A1]
gi|424640294|ref|ZP_18078184.1| exonuclease family protein [Vibrio cholerae HC-56A1]
gi|424644928|ref|ZP_18082676.1| exonuclease family protein [Vibrio cholerae HC-56A2]
gi|443527152|ref|ZP_21093217.1| exonuclease family protein [Vibrio cholerae HC-78A1]
gi|443531346|ref|ZP_21097361.1| exonuclease family protein [Vibrio cholerae HC-7A1]
gi|255736838|gb|EET92235.1| hypothetical protein VCH_002127 [Vibrio cholera CIRS 101]
gi|262022132|gb|EEY40841.1| hypothetical protein VIJ_002539 [Vibrio cholerae RC27]
gi|262029143|gb|EEY47795.1| hypothetical protein VIG_002197 [Vibrio cholerae INDRE 91/1]
gi|262031728|gb|EEY50313.1| hypothetical protein VIH_002769 [Vibrio cholerae CT 5369-93]
gi|340048126|gb|EGR09049.1| exonuclease family protein [Vibrio cholerae HE48]
gi|341638520|gb|EGS63167.1| exonuclease family protein [Vibrio cholerae HC-02A1]
gi|356419217|gb|EHH72775.1| exonuclease family protein [Vibrio cholerae HC-06A1]
gi|356431667|gb|EHH84871.1| exonuclease family protein [Vibrio cholerae HC-22A1]
gi|356447556|gb|EHI00347.1| exonuclease family protein [Vibrio cholerae HC-43A1]
gi|395920649|gb|EJH31471.1| exonuclease family protein [Vibrio cholerae CP1041(14)]
gi|395923966|gb|EJH34777.1| exonuclease family protein [Vibrio cholerae CP1038(11)]
gi|395937095|gb|EJH47818.1| exonuclease family protein [Vibrio cholerae CP1048(21)]
gi|395943076|gb|EJH53751.1| exonuclease family protein [Vibrio cholerae HC-43B1]
gi|395944076|gb|EJH54750.1| exonuclease family protein [Vibrio cholerae HC-20A2]
gi|395951588|gb|EJH62202.1| exonuclease family protein [Vibrio cholerae HE-25]
gi|395960300|gb|EJH70675.1| exonuclease family protein [Vibrio cholerae HC-56A2]
gi|395972139|gb|EJH81750.1| exonuclease family protein [Vibrio cholerae HC-47A1]
gi|408014090|gb|EKG51766.1| exonuclease family protein [Vibrio cholerae HC-50A1]
gi|408014564|gb|EKG52198.1| exonuclease family protein [Vibrio cholerae HC-41A1]
gi|408024793|gb|EKG61881.1| exonuclease family protein [Vibrio cholerae HC-56A1]
gi|408025321|gb|EKG62380.1| exonuclease family protein [Vibrio cholerae HC-55A1]
gi|408033841|gb|EKG70359.1| exonuclease family protein [Vibrio cholerae CP1037(10)]
gi|408057068|gb|EKG91934.1| exonuclease family protein [Vibrio cholerae HC-51A1]
gi|408621525|gb|EKK94528.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|408622618|gb|EKK95594.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|408625330|gb|EKK98243.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|408630304|gb|EKL02915.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|408635733|gb|EKL07919.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|408643101|gb|EKL14840.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|408651557|gb|EKL22813.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|408853475|gb|EKL93268.1| exonuclease family protein [Vibrio cholerae HC-02C1]
gi|408858101|gb|EKL97780.1| exonuclease family protein [Vibrio cholerae HC-46B1]
gi|408861050|gb|EKM00649.1| exonuclease family protein [Vibrio cholerae HC-55B2]
gi|408864717|gb|EKM04135.1| exonuclease family protein [Vibrio cholerae HC-44C1]
gi|408868686|gb|EKM08006.1| exonuclease family protein [Vibrio cholerae HC-59B1]
gi|443454558|gb|ELT18360.1| exonuclease family protein [Vibrio cholerae HC-78A1]
gi|443458429|gb|ELT25825.1| exonuclease family protein [Vibrio cholerae HC-7A1]
Length = 156
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +GEI+ Q +V+P + + + FC ELTGI +++ G L E +
Sbjct: 6 EIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVIQ 64
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K +N +W D ++L +ECR K + P F +++NL +
Sbjct: 65 SMVK-----NFGGSNKIYASWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 151
>gi|395774320|ref|ZP_10454835.1| hypothetical protein Saci8_31315 [Streptomyces acidiscabies 84-104]
Length = 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 6 VIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
VID EATC + E+IE VV V+ ++ + VRP ++ FC ELT
Sbjct: 10 VIDLEATCWDGQPPPGSVSEVIEVGLTVVDVVARTRVSRHRILVRP-VRSRVSAFCTELT 68
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
G+ Q +V G++ EA +L +W ++D + + + + P
Sbjct: 69 GLTQDEVARGVSFAEACR-----VLVEEYGGGERPWASWGEYDRR-QFARQSQADGVAYP 122
Query: 124 AYF---NQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ N + F++ +G R + +A+++AGL +GR H G DDA NIA L+ +
Sbjct: 123 FGYPTERTHTNAKAVFAEAYGLRRKPGMAQALQIAGLPLEGRHHRGEDDAWNIAALVLDL 182
Query: 180 MRRG 183
+ RG
Sbjct: 183 VGRG 186
>gi|311031708|ref|ZP_07709798.1| sporulation inhibitor KapD [Bacillus sp. m3-13]
Length = 158
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGV----SGEIIACFQTYVRPTFEPLLTD 57
+ ++ IDFE T + RN +P+ FP ++ +G+ +II + Y+RP+ P LT+
Sbjct: 5 QIHLFIDFEFTMPENRN-YPKNF--FPEIIEAGIVAVEKDKIIQQYSNYIRPSAFPTLTN 61
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
CK I Q V NG + E + + + +Q +VVTW + D +V L + C+
Sbjct: 62 RCKSFLKISQRDVHNGASFIELIDVLNTYNVQ-----ERGTVVTWGNMDMKV-LRNNCQY 115
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGR 161
+ P ++L + + K FGD N +E + IW+ R
Sbjct: 116 HGVPFPLTCKH-VDLSMEYKKFFGD--QNQTGFMEGSARIWKRR 156
>gi|146302457|ref|YP_001197048.1| exonuclease [Flavobacterium johnsoniae UW101]
gi|146156875|gb|ABQ07729.1| Exonuclease, RNase T and DNA polymerase III [Flavobacterium
johnsoniae UW101]
Length = 181
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ID EATC + + P+ EIIE V+ +GEI ++P ++ FC
Sbjct: 8 IIIDLEATC--WQGVVPKGQQNEIIEIGLAVLDSQTGEITKNKGILIKPQ-RSTVSPFCT 64
Query: 61 ELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELT I Q +D NG++ EA+ LL N ++ ++ +D ML +C+
Sbjct: 65 ELTTITQDLLDKNGVSFEEAVN-----LLIDEYNPDLYTWASYGQYDLN-MLTKQCKSFG 118
Query: 120 IQKPAYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P + IN++ F++ FG R + A++L + +G H G+DDA NIA+++
Sbjct: 119 IPYP-MGEEHINVKEHFAEKFGLKRSTGMNGALQLLNIPLEGTHHRGIDDAKNIAKIM 175
>gi|423982214|ref|ZP_17738059.1| exonuclease family protein [Vibrio cholerae HE-46]
gi|408665214|gb|EKL36033.1| exonuclease family protein [Vibrio cholerae HE-46]
Length = 156
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +GEI+ Q +V+P + + + FC ELTGI +++ G L E +
Sbjct: 6 EIIEIGLAEIDLTAGEIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAEVIQ 64
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K +N +W D ++L +ECR K + P F +++NL +
Sbjct: 65 SMVK-----NFGGSNKIYASWGRDD--LILLNECREKGLSVP--FQEFLNLATLYRIQHR 115
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 151
>gi|310640616|ref|YP_003945374.1| exonuclease rnase t and DNA polymerase iii [Paenibacillus polymyxa
SC2]
gi|386039741|ref|YP_005958695.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
gi|309245566|gb|ADO55133.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus polymyxa
SC2]
gi|343095779|emb|CCC83988.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
Length = 223
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIA-CFQTYVRPTFEPLLTDFCKE 61
Y++ D E T + + EII+ +V V+ G G +A F ++VRP+ P+++ +
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVIHGEDGLFVADTFHSFVRPSNRPVISTDTVQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q +D EA+ WL G ++T + + W D Q ++ S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFIAWL---GTDST-YYLCAWGPDDRQKLV-SHCRTHHV- 115
Query: 122 KPAYFNQWINLRVPFSKVF---GDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ + +++ S++F G R +L +A+EL + + G+ H LDDA+N A++
Sbjct: 116 DLGWIHNTNDIQKQISRLFSSNGKYRQLSLSQALELCNIEFDGQQHRALDDAVNTAQVF 174
>gi|291442766|ref|ZP_06582156.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291345661|gb|EFE72617.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 166
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 27 FPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKW 86
FP + VS GE +A + VRP + + C ELTG+ Q VD G+ +A
Sbjct: 13 FPFLGVS-PGGERLAKHRLLVRPARSEV-SPLCTELTGLTQADVDQGLPFTKACR----- 65
Query: 87 LLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG-DVRC 145
L + +W D+D + +CR Q P + ++ N++ F+ +G R
Sbjct: 66 ALAAKHHTGLIPWASWGDYD-RNQFTRQCRHTGTQYP-FNHRHTNVKAAFTTSYGLRRRP 123
Query: 146 NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRR 182
+ A +AGL +GR H G DDA NIA L+ +M R
Sbjct: 124 GMPRAPTVAGLPLEGRHHRGDDDAWNIAALVLDLMGR 160
>gi|291458895|ref|ZP_06598285.1| exonuclease family protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418149|gb|EFE91868.1| exonuclease family protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 234
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 4 YVVIDFEATCDKERN------LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
Y+V+D E C R L P EII+ +V++ S + YV P ++
Sbjct: 15 YLVLDLE-MCKVPREYQSRGYLCPMEIIQIGAVLLD-ESFRNMEEISLYVHPEH-GVIDR 71
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
F LTGIQ+ QV L EAL ++ + + G + + TWS D L E +
Sbjct: 72 FIANLTGIQRRQVKESKKLREALLELEQRVSEKG----EYKIYTWSGSDYS-QLRRELDL 126
Query: 118 KKIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAIN 171
K+I + A R V + K+FG+ + +L+EA+ L G+ G+ H GLDD+IN
Sbjct: 127 KEISEEAIERFMEQERWVDYQKIFGERYRLGRKVSLEEALSLCGITPDGKAHNGLDDSIN 186
Query: 172 IARLLSVI 179
++ +
Sbjct: 187 TGYIIEKL 194
>gi|332707583|ref|ZP_08427616.1| putative exonuclease [Moorea producens 3L]
gi|332353646|gb|EGJ33153.1| putative exonuclease [Moorea producens 3L]
Length = 186
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ +V+D EATC K EIIE V+ VSG+ + V+P +++F
Sbjct: 5 LDQILVVDVEATCWQGKPPPGQENEIIEIGICVLDVVSGKPLEKDSILVKPE-RSRVSEF 63
Query: 59 CKELTGIQQHQVDNGITLGEA-LYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C +LT + Q QVD GI+ EA DK+L + ++ D+D + + +C
Sbjct: 64 CTKLTTLTQEQVDQGISFVEACSMLQDKYL------SARRVWASYGDYD-RNQFQKQCTS 116
Query: 118 KKIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ ++ P + + IN++ F S+ + +A++L L +G H G DDA NIAR+
Sbjct: 117 RFLRYP-FGTRHINIKTLFAISQALPH-EVGMAQALDLLNLPLEGTHHRGGDDAWNIARI 174
Query: 176 LSVIM 180
S ++
Sbjct: 175 FSRLL 179
>gi|225028307|ref|ZP_03717499.1| hypothetical protein EUBHAL_02579 [Eubacterium hallii DSM 3353]
gi|224954353|gb|EEG35562.1| hypothetical protein EUBHAL_02579 [Eubacterium hallii DSM 3353]
Length = 210
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 20 HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA 79
+ EII+ +V++ EI Q YV P F +L F LTGI++ Q+ N L +A
Sbjct: 15 YASEIIQVGAVLLDEEYKEIGTLCQ-YVHPEF-GILDYFITNLTGIEKGQIKNAPKLKDA 72
Query: 80 LYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ--------KPAYFNQWIN 131
L WL + V WS D L+ E + KK+ KP +W++
Sbjct: 73 LIHMADWL-----GEREYKVFAWSKSDY-WQLDHEIKSKKLNDEKLDELMKP---ERWVD 123
Query: 132 LRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMR 181
+ F K + + L+EA+ L + GR+H GLDDA N ARL+ + +
Sbjct: 124 YQEIFGKKYNFEQAVGLQEALMLCDIEPDGRMHDGLDDAWNTARLIEKLEK 174
>gi|197302182|ref|ZP_03167241.1| hypothetical protein RUMLAC_00908 [Ruminococcus lactaris ATCC
29176]
gi|197298613|gb|EDY33154.1| exonuclease [Ruminococcus lactaris ATCC 29176]
Length = 231
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 27/188 (14%)
Query: 4 YVVIDFEATCDKERNL------HPQEIIEFPSVVVSGV---SGEIIACFQTYVRPTFEPL 54
Y+VID E C ++ + EII+ +V++ EI C YV P +
Sbjct: 15 YLVIDLE-MCKVPKDYRNKNYKYASEIIQIGAVLLDERYRRRDEI--CL--YVHPEH-GV 68
Query: 55 LTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESE 114
+ +F +TGI+ Q+ N L E L +W+ + + V WS+ D L E
Sbjct: 69 IDNFIANMTGIKNRQIKNAPKLRERLLELTEWI-----GDREYQVFAWSNSDFS-QLSHE 122
Query: 115 CRIKKIQKPAYFN-----QWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDD 168
R KK+Q + +WI+ + F K + + +L+EA+ L L GR+H GLDD
Sbjct: 123 VRSKKLQDEKIQSFMAPERWIDYQEVFGKKYSFEKAVSLQEALMLCDLTQDGRMHDGLDD 182
Query: 169 AINIARLL 176
A+N A+L+
Sbjct: 183 ALNTAKLI 190
>gi|229523521|ref|ZP_04412926.1| hypothetical protein VCA_001085 [Vibrio cholerae bv. albensis
VL426]
gi|229337102|gb|EEO02119.1| hypothetical protein VCA_001085 [Vibrio cholerae bv. albensis
VL426]
Length = 176
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + +GEI+ Q +V+P + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFVKPEKDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L E + K +N +W D ++L +EC+ K
Sbjct: 62 AELTGITPRKIEKQGRPLAEVIQSMVK-----NFGGSNKIYASWGRDD--LILLNECQEK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 115 GLSVP--FQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYIDAYNLAKLA 172
Query: 177 SVIM 180
++
Sbjct: 173 LTML 176
>gi|342320538|gb|EGU12478.1| Double-strand siRNA ribonuclease [Rhodotorula glutinis ATCC 204091]
Length = 436
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 1 FEYYVVIDFEATCDKERN-------LHPQEIIEFPSVVVSGVSGEI-------------- 39
F+ ++V D EATC++ +P EIIE+P +++
Sbjct: 98 FDSFLVFDVEATCEEIEGPWGKLAFAYPNEIIEWPVILLQWRKKRRRDERDLAPGEEVEG 157
Query: 40 ----------IACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEA-LYFHDKWLL 88
A F ++V+PT+ L+ FC LTGI Q VD+ T + FH ++L
Sbjct: 158 EDEDDWELVQTAEFHSFVKPTWRRTLSAFCTALTGITQRDVDSAPTFSQLCRNFHRDFIL 217
Query: 89 QMGL-NNTNFSV-VTWSDWDCQVMLESECRIKKIQKPAYF-NQWINLRVPFSKVFGDVRC 145
+ L + N +V VT WD + + C + +P + + I+LR+ S F ++
Sbjct: 218 KHNLFTSENKTVWVTDGPWDLRDFVAKTCYLSGTPRPPWLAGEMIDLRLLVSSFFAGLKK 277
Query: 146 NLKEAVELAG 155
+ E+ L G
Sbjct: 278 DSTESSRLEG 287
>gi|398928564|ref|ZP_10663543.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398168162|gb|EJM56184.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 109
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 1 FEYYVVIDFEATCDK---ERNLHP-------QEIIEFPSVVVSGVSGEIIACFQTYVRPT 50
+ Y +D EATCD+ + P E IE VV+ + EI++ FQ +VRP
Sbjct: 20 YRYLYCVDLEATCDEVGESESSRPLAVVPAQMETIEIGLVVIDLETLEIVSEFQRFVRPL 79
Query: 51 FEPLLTDFCKELTGIQQHQVDNGITLGEA 79
P LTDFCKELT IQQ VD+ T E
Sbjct: 80 ITPTLTDFCKELTSIQQTDVDSSGTYVEV 108
>gi|148978953|ref|ZP_01815243.1| hypothetical protein VSWAT3_05721 [Vibrionales bacterium SWAT-3]
gi|145962042|gb|EDK27329.1| hypothetical protein VSWAT3_05721 [Vibrionales bacterium SWAT-3]
Length = 176
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + SG I+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSENGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SQFCAELT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI +++ G L K +++ N W D ++L EC+ K I+ P
Sbjct: 66 GITPRKIEK---QGRPLESVIKSMIK-NFGGPNKIYAAWGRDD--LILHKECQEKGIEPP 119
Query: 124 AYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
F+++IN+ + D R + A E + W+GR H G DA N+A+L ++
Sbjct: 120 --FSEFINIATLYRVQNRLKDKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|421078843|ref|ZP_15539791.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium wasabiae
CFBP 3304]
gi|401706515|gb|EJS96690.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium wasabiae
CFBP 3304]
Length = 214
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 38 EIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNF 97
+++ F +V+P P LT FCK LTGI+Q+ VD+ + D L + +
Sbjct: 72 QVVTNFSQFVQPIIHPDLTPFCKALTGIKQNDVDSAQPFSKVSQIVDTLLQPFLIEGVVW 131
Query: 98 SVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLI 157
+W +D ++ +C ++ + + + + +S VF +LK+AVE +
Sbjct: 132 --CSWGTYDAD-QIKRDCVRLGVKSSLNDLKHLPVDLFYSNVFDTPAPDLKKAVESLEIT 188
Query: 158 WQGRVHCGLDDAINIARLLSVIM 180
W+G+ H LDD+ ++A L++ ++
Sbjct: 189 WEGQYHRALDDSRHVALLVTKLL 211
>gi|205374693|ref|ZP_03227487.1| sporulation inhibitor KapD [Bacillus coahuilensis m4-4]
Length = 205
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 4 YVVIDFEATC-DK---ERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
++ +DFE + D+ +R P EIIE VV G II F +YV+P LT C
Sbjct: 6 HIFLDFEFSMPDRKMSQRGFFP-EIIEVGMVVEE--DGSIIESFSSYVQPRVFKTLTPRC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
K+ I+Q VD GI+ E +++ K L +N+ + + D +V+ E+ C
Sbjct: 63 KKFLKIKQEDVDGGISFIEFIHYLQK--LNKKRKKSNYYL---GNMDMKVLREN-CEKAG 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAI---NIARL 175
+ P + ++++L + + + FGD + L +AVE G G+ H LDDA+ NI +L
Sbjct: 117 LLFP-FQGEFVDLSLEYKRFFGDRNQTGLWKAVEEYGKDGVGKHHKALDDAMTTYNIYKL 175
Query: 176 LS 177
+
Sbjct: 176 VE 177
>gi|361069199|gb|AEW08911.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143928|gb|AFG53450.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143930|gb|AFG53451.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143932|gb|AFG53452.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143934|gb|AFG53453.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143936|gb|AFG53454.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143940|gb|AFG53456.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143942|gb|AFG53457.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143944|gb|AFG53458.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143946|gb|AFG53459.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143948|gb|AFG53460.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143950|gb|AFG53461.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143952|gb|AFG53462.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143954|gb|AFG53463.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143956|gb|AFG53464.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143958|gb|AFG53465.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143960|gb|AFG53466.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 154 AGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKS-LTPQANPNCLTWNRHHFLEPQ 212
AGLIW+GR H GLDDA N ARLL +MRRG K +IT S L AN + L P
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANGSTL---------PL 51
Query: 213 AMYTPPHTSL 222
+ PP T +
Sbjct: 52 PIQEPPKTGV 61
>gi|300775119|ref|ZP_07084981.1| exonuclease [Chryseobacterium gleum ATCC 35910]
gi|300505859|gb|EFK36995.1| exonuclease [Chryseobacterium gleum ATCC 35910]
Length = 183
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 2 EYYVVIDFEATCDKERNLHPQE--IIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
E +++D EATC + R QE IIE +++ +G+I ++P + + FC
Sbjct: 5 ENILIVDLEATCWENRPPRGQESEIIEIGVCIMNAKTGKISKSEGILIKPQHSKV-SPFC 63
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELT I Q +D+ GI L +A +L+ ++ + ++ ++D ML+++ R
Sbjct: 64 TELTTITQSMLDHEGIMLDDAFD-----ILRAEYDSEELTWASYGNYDLN-MLQNQARRF 117
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR--CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + IN++ F ++ +R ++ A+ G +G H G+DDA NIA++L
Sbjct: 118 YTDYPMS-DDHINVKTLFGEIHPTIRKSVGMQRALGELGFTLEGTHHRGVDDARNIAKIL 176
>gi|417951741|ref|ZP_12594829.1| hypothetical protein VISP3789_18966 [Vibrio splendidus ATCC 33789]
gi|342803961|gb|EGU39302.1| hypothetical protein VISP3789_18966 [Vibrio splendidus ATCC 33789]
Length = 176
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + SG I+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSENGVGTTGEIIEAGLAEIDLASGTIVKRAQYYVKPEKDEV-SQFCAELT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI +++ G L K +++ N W D ++L EC+ K I+ P
Sbjct: 66 GITPRKIEK---QGRPLESVIKSMIK-NFGGPNKIYAAWGRDD--LILHKECQEKGIEPP 119
Query: 124 AYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
F+++IN+ + D R + A E + W+GR H G DA N+A+L ++
Sbjct: 120 --FSEFINIATLYRVQNRLKDKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|383143938|gb|AFG53455.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
gi|383143962|gb|AFG53467.1| Pinus taeda anonymous locus CL2233Contig1_02 genomic sequence
Length = 86
Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 154 AGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKS-LTPQANPNCLTWNRHHFLEPQ 212
AGLIW+GR H GLDDA N ARLL +MRRG K +IT S L AN + L P
Sbjct: 1 AGLIWEGRAHSGLDDAKNTARLLLDLMRRGIKLTITNSMLYASANGSTL---------PL 51
Query: 213 AMYTPPHTSL 222
+ PP T +
Sbjct: 52 PIQDPPKTGV 61
>gi|258621526|ref|ZP_05716559.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258627541|ref|ZP_05722318.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|449146225|ref|ZP_21777016.1| hypothetical protein D908_15711 [Vibrio mimicus CAIM 602]
gi|258580123|gb|EEW05095.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258586144|gb|EEW10860.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|449078163|gb|EMB49106.1| hypothetical protein D908_15711 [Vibrio mimicus CAIM 602]
Length = 176
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + +G+I+ Q +V+P + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLSAGKIVKRAQYFVKPEKDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L E L K +N +W D ++L +ECR K
Sbjct: 62 AELTGITPRKIEKQGRPLVEVLQSMVK-----NFGGSNKIYASWGRDD--LILINECREK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P F +++NL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 115 GI--PVPFQEFLNLATLYRIQHRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKLA 172
Query: 177 SVIM 180
++
Sbjct: 173 LTML 176
>gi|291520945|emb|CBK79238.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Coprococcus catus GD/7]
Length = 218
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 3 YYVVIDFEATCDKERNL------HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT 56
+Y+VID E C R+ + E I+ +V+++ ++ + YV P ++
Sbjct: 2 FYLVIDLE-MCRVPRDYRNKAYHYAYETIQIGAVLLNEEFKQV-GTIREYVHPE-HGVID 58
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
F ++LTGI+ QV +GEAL W+ + + V TWS+ D +L E
Sbjct: 59 PFIEKLTGIKNSQVKKAPCIGEALVHMIDWI-----GDREYKVYTWSESDRNQLLH-EIT 112
Query: 117 IKKIQKPA-----YFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
K+I + ++W++ ++ FS+ F R +L+EA+ A + +G+ H G+DDA+
Sbjct: 113 AKQITDESVDAFMMEDRWVDYQMVFSQRFQLTRRISLEEALGRADIDPKGKFHDGMDDAV 172
Query: 171 NIARLLS 177
N L+
Sbjct: 173 NTGLLIE 179
>gi|374601810|ref|ZP_09674808.1| hypothetical protein PDENDC454_02660 [Paenibacillus dendritiformis
C454]
gi|374392676|gb|EHQ64000.1| hypothetical protein PDENDC454_02660 [Paenibacillus dendritiformis
C454]
Length = 222
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGE--IIACFQTYVRPTFEPLLTDFCKEL 62
++ D E T +++ EIIE +V V+ G+ I+ FQ +V+PT P L+
Sbjct: 4 IIYDLEMTVKRKKGEFA-EIIEIGAVKVAEQDGKAAIVDTFQAFVKPTLSPKLSQDTVNF 62
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI+Q V+ L + L W ++ ++++ +W D L+ ECR+K+I
Sbjct: 63 TGIRQEDVNASPVLQDVLDQFVAW-----IDTEDYALCSWGPDDKAQFLK-ECRMKRI-- 114
Query: 123 PAY-FNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
P + NL+ P S V + LK A++ + + G H LDDA N A
Sbjct: 115 PLHWLRNHNNLQKPVSLVMNRGSHQQVGLKTALDTLQVPFVGTQHRALDDAYNTA 169
>gi|262403997|ref|ZP_06080552.1| hypothetical protein VOA_001985 [Vibrio sp. RC586]
gi|262349029|gb|EEY98167.1| hypothetical protein VOA_001985 [Vibrio sp. RC586]
Length = 156
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +G I+ Q +V+P + + + FC ELTGI +++ G L E
Sbjct: 6 EIIEVGLAEIDLSAGTIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLAE--- 61
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDW--DCQVMLESECRIKKIQKPAYFNQWINLRVPF--S 137
+LQ + N S ++ W D ++++ +ECR K I P F +++NL +
Sbjct: 62 -----VLQSMVKNFGGSNKIYASWGRDDRILI-NECREKGI--PVPFQEFLNLATLYRIQ 113
Query: 138 KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 114 HRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 151
>gi|395804241|ref|ZP_10483482.1| exonuclease [Flavobacterium sp. F52]
gi|395433885|gb|EJF99837.1| exonuclease [Flavobacterium sp. F52]
Length = 181
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 5 VVIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
++ID EATC + Q EIIE V+ +GEI ++P ++ FC EL
Sbjct: 8 IIIDLEATCWQGVVPRGQQNEIIEIGLAVLDTETGEISKNKGILIKPQ-RSHVSPFCTEL 66
Query: 63 TGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDW---DCQVMLESECRIK 118
T I Q +D NG++ EA+ + ++ N + TW+ + D ML +C+
Sbjct: 67 TTITQDLLDKNGVSFEEAV--------DLLIDEYNPDLYTWASYGQYDLN-MLTKQCKSF 117
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P + IN++ F++ FG R + A++L + +G H G+DDA NIA++L
Sbjct: 118 GIPYP-MGEEHINVKEHFAEKFGLKRSTGMNGALQLLNIPLEGTHHRGIDDAKNIAKIL 175
>gi|402818180|ref|ZP_10867765.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
gi|402504271|gb|EJW14801.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
Length = 224
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 22/192 (11%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGE--IIACFQTYVRPTFEPLLTDFCKEL 62
++ D E T +++ EIIE +V V+ + I FQ +V+PT P LT+
Sbjct: 4 IIYDLEMTVKRKKGAFA-EIIEIGAVKVTESDDKFVIADTFQAFVKPTLSPKLTEDTVNF 62
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI Q + N TL + L W ++ ++++ +W D L+ ECR KKI
Sbjct: 63 TGITQEDITNASTLQDVLDQFIAW-----IDTDDYALCSWGPDDKTQFLK-ECRQKKI-- 114
Query: 123 PAYFNQWI----NLRVPFSKVFG---DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
P + W+ NL+ S + + LK A+E + + G H LDDA N A L
Sbjct: 115 PLH---WLRNHNNLQKQVSTAMKREHNQQIGLKSALEALDVPFVGNQHRALDDAYNTA-L 170
Query: 176 LSVIMRRGFKFS 187
+ + M+ + +
Sbjct: 171 IYIRMQEHIQLT 182
>gi|149189379|ref|ZP_01867664.1| hypothetical protein VSAK1_25975 [Vibrio shilonii AK1]
gi|148836737|gb|EDL53689.1| hypothetical protein VSAK1_25975 [Vibrio shilonii AK1]
Length = 176
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + V E++ Q YV+P + + + FC ELTGI +V+ G L +
Sbjct: 26 EIIEVGLAEIDLVKQEVVKRAQYYVKPETDKV-SLFCTELTGITPRKVEKQGRPLASVIQ 84
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K N +W D ++L EC+ K I+ P F +++NL +
Sbjct: 85 SMVK-----NFGGPNKIYASWGRDD--IILLEECQSKGIEMP--FKEFVNLATLYRIQNR 135
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R K A E G+ W+GR H G DA N+A+L
Sbjct: 136 LKDKRIGHKAAQESQGIEWEGRQHSGYVDAYNLAKL 171
>gi|422405226|ref|ZP_16482272.1| exonuclease, partial [Pseudomonas syringae pv. glycinea str. race
4]
gi|330879830|gb|EGH13979.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 143
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP P+LT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPVLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LT I Q +D+ L ++WL ++ +W D+D Q LE E R ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERWLSHHRARVLGWA--SWGDYDRQ-QLEEEWRYHRLD 118
Query: 122 KPAYFNQWINLRVPFSKV 139
+NL+ F++
Sbjct: 119 SALSSMPHVNLKQRFAQA 136
>gi|153875688|ref|ZP_02003377.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067847|gb|EDN66622.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 187
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 2 EYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGV-SGEIIACFQTYVRPTFEPLLTDF 58
E +VID EATC DK EIIE ++ + + ++ ++P E +++F
Sbjct: 5 EQILVIDIEATCWEDKIPKGQKNEIIEIGICILDTTFTYDRLSSESIIIKPQSE--VSEF 62
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C +LT + Q VD GI+L E +LQ + + ++ +D + E ECR K
Sbjct: 63 CTQLTTLTQADVDKGISLKEGCD-----ILQTKYFSKQHAWASYGAYD-RKQFERECRTK 116
Query: 119 KIQKPAY-----FNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I+ P + QWI + K R + A+ + +G H G+DDA NIA
Sbjct: 117 GIEYPFHQKHINVKQWIMETLNLKK-----RVGMVGALNILDFPLEGTHHRGVDDAWNIA 171
Query: 174 RLLSVIMR 181
++L+ ++
Sbjct: 172 KILAWLLE 179
>gi|261210895|ref|ZP_05925185.1| hypothetical protein VCJ_001149 [Vibrio sp. RC341]
gi|260839870|gb|EEX66470.1| hypothetical protein VCJ_001149 [Vibrio sp. RC341]
Length = 156
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +G+I+ Q +V+P + + + FC ELTGI +++ G L E
Sbjct: 6 EIIEVGLAEIDLSAGKIVKRAQYFVKPEHDEI-SLFCAELTGITPRKIEKQGRPLAE--- 61
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDW--DCQVMLESECRIKKIQKPAYFNQWINLRVPF--S 137
+LQ + N S ++ W D ++++ EC+ K I P F +++NL +
Sbjct: 62 -----VLQSMVKNFGGSNKIYASWGRDDRILIH-ECQEKGI--PVPFQEFLNLATLYRIQ 113
Query: 138 KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
D R + A E G+ W+GR H G DA N+A+L ++
Sbjct: 114 HRLKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKLALTML 156
>gi|198472654|ref|XP_002133092.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
gi|198139107|gb|EDY70494.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
Length = 83
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 41/74 (55%)
Query: 126 FNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIMRRGFK 185
FNQWI+ R + K + + A+E L +QGR H G+DDA N+ L+ + R G
Sbjct: 5 FNQWIDARDIYKKWYKYRPFSFDNALEHVMLTFQGRAHSGIDDAKNLGSLICKMFRDGAP 64
Query: 186 FSITKSLTPQANPN 199
FSITK LTP N
Sbjct: 65 FSITKDLTPHKELN 78
>gi|262165616|ref|ZP_06033353.1| hypothetical protein VMA_002063 [Vibrio mimicus VM223]
gi|262171593|ref|ZP_06039271.1| hypothetical protein VII_002415 [Vibrio mimicus MB-451]
gi|424810199|ref|ZP_18235562.1| hypothetical protein SX4_0820 [Vibrio mimicus SX-4]
gi|261892669|gb|EEY38655.1| hypothetical protein VII_002415 [Vibrio mimicus MB-451]
gi|262025332|gb|EEY44000.1| hypothetical protein VMA_002063 [Vibrio mimicus VM223]
gi|342322570|gb|EGU18359.1| hypothetical protein SX4_0820 [Vibrio mimicus SX-4]
Length = 156
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDN-GITLGEALY 81
EIIE + +G+I+ Q +V+P + + + FC ELTGI +++ G L E L
Sbjct: 6 EIIEVGLAEIDLSAGKIVKRAQYFVKPEKDEI-SLFCAELTGITPRKIEKQGRPLVEVLQ 64
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPF--SKV 139
K +N +W D ++L +ECR K I P F +++NL +
Sbjct: 65 SMVK-----NFGGSNKIYASWGRDD--LILINECREKGI--PVPFQEFLNLATLYRIQHR 115
Query: 140 FGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
D R + A E G+ W+GR H G DA N+A+L
Sbjct: 116 LKDKRIGHRAAQESQGIEWEGRQHSGYVDAYNLAKL 151
>gi|399031628|ref|ZP_10731531.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
gi|398070046|gb|EJL61365.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
Length = 181
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 18/180 (10%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ID EATC + + P+ EIIE V+ +GEI ++P + + FC
Sbjct: 8 IIIDLEATC--WQGMVPKGQENEIIEIGLAVLDVETGEITKNQGILIKPQRSSI-SPFCT 64
Query: 61 ELTGIQQHQVD-NGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELT I Q +D NG++ EA+ D++ + ++ ++ +D ML+ + +
Sbjct: 65 ELTTITQDLLDENGVSFEEAIEQLVDEYQPDL------YTWASYGQYDLN-MLKKQSKSF 117
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
I P ++ IN++V F++ FG ++ + A+ L + +G H G+DDA NIA++L+
Sbjct: 118 GIPYP-MGDEHINVKVTFAEKFGLLKSTGMNGALHLLDIPLEGTHHRGIDDAKNIAKILN 176
>gi|308067866|ref|YP_003869471.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus polymyxa E681]
gi|305857145|gb|ADM68933.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Paenibacillus polymyxa E681]
Length = 230
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIA-CFQTYVRPTFEPLLTDFCKE 61
Y++ D E T + + EII+ +V VV G G +A F ++VRP+ P+L+ +
Sbjct: 10 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVVQGDDGLYVADTFHSFVRPSNRPVLSTDTVQ 68
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q +D EA+ WL ++ + + W D Q ++ S CR +
Sbjct: 69 FTGITQRDIDAAPLFPEAVKQFVTWL----GTDSPYYLCAWGPDDRQKLV-SHCRTHHVD 123
Query: 122 KPAYFNQWINLRVPFSKVF---GDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ + +++ S++ G R +L +A+EL + + G+ H LDDA+N A++
Sbjct: 124 L-GWIHNTNDIQKQISRLLSSNGKYRQLSLSQALELCNIDFDGQQHRALDDAVNTAQVF 181
>gi|209695293|ref|YP_002263222.1| exonuclease [Aliivibrio salmonicida LFI1238]
gi|208009245|emb|CAQ79508.1| putative exonuclease [Aliivibrio salmonicida LFI1238]
Length = 184
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 1 FEYYVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
F V D E C ++ EIIE + +GE++ Q YV+P E ++ FC
Sbjct: 11 FNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKPD-EDEISLFC 69
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
ELTGI +++ G L K +++ TN W +++L+SEC K
Sbjct: 70 VELTGITPRKIEKQ---GRPLEGVLKSMIK-NFGGTNKIYAAWGH--DELILKSECEAKG 123
Query: 120 IQKPAYFNQWINLRVPF---SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I+ P F ++INL + S+ D R + A+E + W+GR H G DA N+A+L
Sbjct: 124 IEFP--FVEFINLATLYRIKSRKKND-RMGQRRAMEELHIEWEGRQHSGYVDAYNLAQLA 180
Query: 177 SVIM 180
I+
Sbjct: 181 LKIL 184
>gi|422593907|ref|ZP_16668199.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330984216|gb|EGH82319.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 222
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 23/194 (11%)
Query: 1 FEYYVVIDFEATC--------DKERNLHP-------QEIIEFPSVVVSGVSGE-IIACFQ 44
+ Y + +D EATC D+E +P E IE +VVV + + ++A F
Sbjct: 20 YRYLLCVDLEATCNEIPEGLSDEEARSYPGAVPVDEMETIEVGAVVVDTWNQDSVVAEFC 79
Query: 45 TYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSD 104
++V+P P LT FC LT I Q VD Y L+ L + W
Sbjct: 80 SFVKPVLHPQLTPFCVNLTTITQSDVDQAED-----YCSVSKALEGFLEPFRADGIMWGS 134
Query: 105 WDCQVMLESECRIKKIQKPAYFN--QWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRV 162
W + + E + + A + + NL+ K LK AV GL W G
Sbjct: 135 WGSYDLKQLEQDAARHRCKAMLSDLEHTNLKKWHWKALNCRAMGLKNAVLDLGLDWVGTY 194
Query: 163 HCGLDDAINIARLL 176
H G+DDA N+A ++
Sbjct: 195 HRGIDDARNVASVV 208
>gi|422593815|ref|ZP_16668107.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|330984124|gb|EGH82227.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 206
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 3 YYVVIDFEATC-DKERNLHP----QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
Y + ID E TC E P +E+IE + EI+ ++P P+L++
Sbjct: 16 YLIGIDLECTCWPAEMVGAPDRMEREVIEIGLAAIDMEKLEIVGTHSVLIKPEHHPVLSE 75
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
FC LT I ++ E L WL + N +++ +W +D L+ E
Sbjct: 76 FCTSLTTITNEMLECAPLFPEGLDQAMGWLSKF---NEDYAWCSWGMFDLH-HLQHESHR 131
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDV-RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K ++ N + +S+ + R +K A++ G+ G H G+DDA N+ARL+
Sbjct: 132 KGVELGLRSTLHFNAKTLYSQSHPRLKRRGMKSALDHEGVKLAGTHHRGVDDATNMARLI 191
>gi|268577631|ref|XP_002643798.1| Hypothetical protein CBG02010 [Caenorhabditis briggsae]
Length = 334
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEII--ACFQTYVRPTFEPLLTDF 58
F+ V++ + T ++ P E+I+ +VVV + I F YV P LT+
Sbjct: 43 FQNLVILKVKTTSQEKNYDFPSEVIQISAVVVDVKNNAIRENMMFNEYVMPVINSKLTEN 102
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C + TG+ Q V+N + WL L + V S D L+ +C +
Sbjct: 103 CVKTTGVTQENVNNARSFRIVNEKFSNWLESNQLVGVKSAFVMDSRVDIWQRLQYQCALI 162
Query: 119 KIQKPAYFNQWINL-RVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
++ PA F QWINL V F + N + + + R ++ + +A+++
Sbjct: 163 GVRMPARFRQWINLWTVCFIEAESMPEDNTRLLADAFWIDVPERRLTAPEECLILAKVVQ 222
Query: 178 VIMRRGFKFSITKSLT 193
++ + F +I + LT
Sbjct: 223 NLLAQKFHLTINQVLT 238
>gi|342878485|gb|EGU79822.1| hypothetical protein FOXB_09681 [Fusarium oxysporum Fo5176]
Length = 633
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE ++V S E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILVDANSLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQEHPDVLT 235
>gi|317128745|ref|YP_004095027.1| exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
gi|315473693|gb|ADU30296.1| Exonuclease RNase T and DNA polymerase III [Bacillus
cellulosilyticus DSM 2522]
Length = 312
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 18/180 (10%)
Query: 4 YVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
Y+ DFE C +K + E I +V + E ++ F +++P + L+ FCK L
Sbjct: 7 YIFFDFEMLCSNKNMSFREMEAIRLGAVKY-DIESETVSTFDHFIKPINDEPLSAFCKNL 65
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESECR----- 116
T I + + N + +W+ G+ + F +WS D +++++S+
Sbjct: 66 TRISEENLKNAKSFPVVFADFLRWI--GGVKKSRF--FSWSKSDLSRLIIDSKTHHIPLS 121
Query: 117 -IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I KI+K ++I+ + FSK +++ A++L L ++G++H +DDA N R+
Sbjct: 122 TIYKIKK-----RYIDFQAIFSKRVSKNTPSVENALKLYELSFKGQLHNPVDDAYNTLRI 176
>gi|422622899|ref|ZP_16690918.1| exonuclease, partial [Pseudomonas syringae pv. pisi str. 1704B]
gi|330946499|gb|EGH47535.1| exonuclease [Pseudomonas syringae pv. pisi str. 1704B]
Length = 137
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 3 YYVVIDFEATCDKER-NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+++VID EAT ++ + E+IE + +V+ G + F+ +VRP PLLT FC+E
Sbjct: 3 HWLVIDLEATTEEGGWPVAEMEVIEIGATLVNQ-DGRELDHFERFVRPARRPLLTHFCRE 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVM 110
LT I Q +D+ L ++W L++ +V W+ W ++
Sbjct: 62 LTHINQSSIDSAAPLTTVWPQFERW-----LSHHRARIVGWASWGTTIV 105
>gi|334133474|ref|ZP_08507026.1| exonuclease [Paenibacillus sp. HGF7]
gi|333609031|gb|EGL20311.1| exonuclease [Paenibacillus sp. HGF7]
Length = 222
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGE--IIACFQTYVRPTFEPLLTDFCKEL 62
+V D E T +++ +H EIIE + V G+ + FQ++V+P P+++ + L
Sbjct: 4 IVYDLEMTVTRKK-IHVSEIIEIGAAAVEITDGKPAVTGTFQSFVKPDRSPVISASTQAL 62
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI+Q ++ + L +W + + ++ + W D + L S+CR+ ++
Sbjct: 63 TGIKQSELQSAEPWPLVLERLLEW-----IGDGDYYLCAWGPDDL-IQLGSDCRMHGVK- 115
Query: 123 PAYFNQWINLRVPFSKVFGDV-------RCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
WI K+ + + LK A+E + + G H LDDA+N A+L
Sbjct: 116 ----TDWICNHNNLQKLMAGLVQQEKQQQMGLKTALEYWNIPFDGSHHRALDDAMNTAKL 171
>gi|374322575|ref|YP_005075704.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus terrae HPL-003]
gi|357201584|gb|AET59481.1| Inhibitor of the KinA pathway to sporulation, exonuclease
[Paenibacillus terrae HPL-003]
Length = 223
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSV-VVSGVSGEIIA-CFQTYVRPTFEPLLTDFCKE 61
Y++ D E T + + EII+ +V V+ G G A F ++VRP+ P+L+ +
Sbjct: 3 YIIYDLEFTVSRNAR-YSSEIIDIGAVKVMKGEDGLYAADTFHSFVRPSNRPVLSTDTVQ 61
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
TGI Q +D EA+ WL ++ + + W D Q ++ S CR +
Sbjct: 62 FTGITQRDIDAAPLFPEAVKQFIAWL----GTDSPYYLCAWGPDDRQKLV-SHCRTHHVD 116
Query: 122 KPAYFNQWI----NLRVPFSKVFGD----VRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
WI +++ S++ G + +L +A+EL + + G+ H LDDA+N A
Sbjct: 117 L-----NWIHNTNDIQKQISRLSGSNGKYRQLSLSQALELCNIDFDGQQHRALDDALNTA 171
Query: 174 RLL 176
++
Sbjct: 172 QVF 174
>gi|443243600|ref|YP_007376825.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
gi|442800999|gb|AGC76804.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
Length = 182
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 5 VVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
++ID EATC K EIIE V++ + I ++P + T FC EL
Sbjct: 7 IIIDLEATCWNGKVPTGQVNEIIEIGICVLNTNTSVITRQKGILIQPERSTVST-FCTEL 65
Query: 63 TGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
T I Q +D G++ EA L+ + +++ ++ +D M++ +C+++ ++
Sbjct: 66 TTITQELLDKEGVSFKEACT-----QLREEYHAHHYTWASYGAYDLN-MMKKQCKMRGME 119
Query: 122 KPAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P N IN++ FS+V G + +K A+ + +G H G+DDA NIA++L
Sbjct: 120 YPLAQNH-INVKTLFSEVKGLKGKVGMKGALGILNFPLEGTHHRGVDDANNIAKILD 175
>gi|167751276|ref|ZP_02423403.1| hypothetical protein EUBSIR_02262 [Eubacterium siraeum DSM 15702]
gi|167655783|gb|EDR99912.1| exonuclease [Eubacterium siraeum DSM 15702]
Length = 319
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 23 EIIEFPSVVVS-GVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALY 81
EII+ +V V+ G+ E F YVRP + L K+LTGI ++ + N L L
Sbjct: 12 EIIQIGAVAVTDGIVSE--DFFSEYVRPRYYTELKGRIKKLTGITKNDLKNAHDLTVVLK 69
Query: 82 FHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFSKVFG 141
KWL + G + +VTW D +++ +C + + + +W NL+ ++ +G
Sbjct: 70 SFRKWLEKFG---KDVIIVTWGPDDIPTLVK-QCEFYE-RDTGWLPEWFNLQPLMTRQYG 124
Query: 142 DVRC--NLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
R L+ AVE+ G+ + H ++DA A +L+ I
Sbjct: 125 IDRAQITLQSAVEITGVQQELDYHSAINDAYYTALVLTKI 164
>gi|302911266|ref|XP_003050455.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731392|gb|EEU44742.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 627
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANSLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS PQ +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPQEHPDVLT 235
>gi|407072393|ref|ZP_11103231.1| hypothetical protein VcycZ_22729 [Vibrio cyclitrophicus ZF14]
Length = 176
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + SG I+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSENGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SLFCAELT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI +++ G L K +++ W D ++L EC+ K I+ P
Sbjct: 66 GITPRKIEK---QGRPLESVIKSMIK-NFGGPKKIYAAWGRDD--LILHKECKEKGIEPP 119
Query: 124 AYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
F+++IN+ + + R + A E + W+GR H G DA N+A+L ++
Sbjct: 120 --FSEFINIATLYRIQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLTLTML 176
>gi|346308361|ref|ZP_08850479.1| hypothetical protein HMPREF9457_02188 [Dorea formicigenerans
4_6_53AFAA]
gi|345903183|gb|EGX72950.1| hypothetical protein HMPREF9457_02188 [Dorea formicigenerans
4_6_53AFAA]
Length = 218
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 4 YVVIDFEA-----TCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
Y+VID E +R H E I+ +V++ + I +V P + ++ F
Sbjct: 3 YLVIDLEMCKVPRDYRSKRYKHANETIQIGAVLLDE-EFKRIGTLSQFVHPE-QGVIDYF 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESECRI 117
+ LTGI+ QV + L EAL W+ + + V WS D Q++ E + +
Sbjct: 61 IENLTGIKNGQVKHAPRLQEALLHMLNWI-----GDREYKVYVWSGSDRAQILHEIKAKN 115
Query: 118 KKIQKPAYF---NQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+K A F ++W++ + F K + R +L+EA+ A + +GR H GL+DA+N
Sbjct: 116 IVDEKVASFMEESRWVDYQDIFMKRYEMSRKMSLEEALGRADIDPEGRFHDGLNDAVNTG 175
Query: 174 RLLS 177
L+
Sbjct: 176 LLIE 179
>gi|254417569|ref|ZP_05031307.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
gi|196175667|gb|EDX70693.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
Length = 191
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 5 VVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+VID EATC K EIIE ++ S + V+P +++FC EL
Sbjct: 9 LVIDVEATCWQGKPPPGQESEIIEIGVCLLDCHSHSAVKTESMLVKPE-RSTVSEFCTEL 67
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
T + Q QVD G++ +A LQ + ++ ++D + + +C+ ++
Sbjct: 68 TTLTQEQVDQGMSFAQACE-----RLQKRYLSHQRVWASYGEYD-KNQFQKQCQSFGVEY 121
Query: 123 PAYFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
P + ++ IN++ F+ + + +A+ L L QG H G+DDA NI R+LS ++
Sbjct: 122 P-FDSRHINVKTWFALAYSLQKEVGMLKALFLLKLSLQGTHHRGVDDAANIGRILSQLL 179
>gi|340522875|gb|EGR53108.1| RNA-binding ran Zn-finger protein [Trichoderma reesei QM6a]
Length = 624
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANTLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS PQ +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPQDHPDVLT 235
>gi|408388372|gb|EKJ68058.1| hypothetical protein FPSE_11869 [Fusarium pseudograminearum CS3096]
Length = 634
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILMDANTLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAITRFDAFATEHLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS PQ +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPQEHPDVLT 235
>gi|345570216|gb|EGX53041.1| hypothetical protein AOL_s00007g377 [Arthrobotrys oligospora ATCC
24927]
Length = 597
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 3 YYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+YVVI TCD+ E+IE ++++ S E + VRP P+ T C
Sbjct: 2 FYVVIHVATTCDEHGVYVTKDSAEVIEIGWILLNAKSLEEVHRESVLVRPVNTPI-TPLC 60
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRIK 118
LT + V N T +A+ D ++ + + N +F+ VT WD +V L E R K
Sbjct: 61 TSLTTLTWEHVRNAGTFRDAINRFDSFVQEYLSGQNNDFTFVTLDAWDLRVQLPREARDK 120
Query: 119 KIQKPAYF--NQWINLRVPFSK 138
+ P Y ++ +LR +++
Sbjct: 121 AVVLPPYLQHSRTFDLRTEYTR 142
>gi|260772767|ref|ZP_05881683.1| hypothetical protein VIB_001223 [Vibrio metschnikovii CIP 69.14]
gi|260611906|gb|EEX37109.1| hypothetical protein VIB_001223 [Vibrio metschnikovii CIP 69.14]
Length = 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + +G+I+ Q YV+P + + ++FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDLTAGKIVKRAQYYVQPEQDKI-SEFC 61
Query: 60 KELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESECRI 117
ELTGI +V G L + +L+ + N S ++ W ++L EC
Sbjct: 62 VELTGITPRKVAKQGRPLAD--------VLRSMVKNFGGSKKIYACWGRDDLILAKECAQ 113
Query: 118 KKIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
K + P ++ INL + D R + A E G+ W+GR H G DA N+A+L
Sbjct: 114 KGLPMP--IHECINLATLYRLQHRLKDKRIGHRAAQEAQGIDWEGRQHSGYVDAYNLAKL 171
>gi|322696205|gb|EFY88001.1| RNA binding protein (Arp), putative [Metarhizium acridum CQMa 102]
Length = 623
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 94/233 (40%), Gaps = 41/233 (17%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANSLEEITHESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAISRFDTFATDYLTSKNLDFVFVTLDAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHCG 165
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 131 KAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVDPVQSSAPIKHN 190
Query: 166 L----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS PQ +P+ LT
Sbjct: 191 LPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPQDHPDVLT 235
>gi|332878806|ref|ZP_08446521.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683157|gb|EGJ56039.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 183
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ID EATC + P+ EIIE ++ ++GEI V+PT + + FC
Sbjct: 6 IIIDLEATC--WEGIPPKGEVSEIIEIGICLLDTLTGEISDNRGILVKPTHSKI-SPFCT 62
Query: 61 ELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LT I V G++ +AL +L+ ++ ++ ++D + ML+ +C ++K
Sbjct: 63 QLTTITPELVAREGVSFEKAL-----QILKREYQAYQYTWASYGNYD-KNMLQKQCALRK 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P N+ IN++ F +V R + +A+ + G H G DDA NIA+++
Sbjct: 117 LPYPMR-NEHINVKELFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIM 173
>gi|149068096|gb|EDM17648.1| rCG39336, isoform CRA_a [Rattus norvegicus]
gi|149068097|gb|EDM17649.1| rCG39336, isoform CRA_a [Rattus norvegicus]
gi|149068098|gb|EDM17650.1| rCG39336, isoform CRA_a [Rattus norvegicus]
Length = 99
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P P+L++F
Sbjct: 34 YDYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEF 92
>gi|228472478|ref|ZP_04057240.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
gi|228276163|gb|EEK14910.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
Length = 184
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ID EATC + P+ EIIE ++ ++GE+ V+PT + + FC
Sbjct: 6 IIIDLEATC--WEGIPPKGEVSEIIEIGICLLDTLTGEVSDNRGILVKPTHSKI-SPFCT 62
Query: 61 ELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LT + V G++ EAL +L+ ++ ++ ++D + ML+ +C ++K
Sbjct: 63 QLTTLTPELVAREGVSFEEAL-----QILKKEYQAYQYTWASYGNYD-RNMLQKQCALRK 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P N+ IN++ F +V R + +A+ + G H G DDA NIA+++
Sbjct: 117 LPYPMR-NEHINVKERFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIM 173
>gi|358392278|gb|EHK41682.1| hypothetical protein TRIATDRAFT_163678, partial [Trichoderma
atroviride IMI 206040]
Length = 622
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILIDANSLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAITRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHDHPDVLT 235
>gi|451999974|gb|EMD92436.1| hypothetical protein COCHEDRAFT_1174391 [Cochliobolus
heterostrophus C5]
Length = 614
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVNTPI-TA 72
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + QV N + +A+ F++ + N F+ VT WD +V L E R
Sbjct: 73 LCTSLTTLTWDQVRNAGSFRDAIERFNNFHAEHIAPKNLEFAFVTLDSWDLRVQLPREAR 132
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 133 DKAVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKH 192
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 193 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 238
>gi|330930529|ref|XP_003303069.1| hypothetical protein PTT_15105 [Pyrenophora teres f. teres 0-1]
gi|311321193|gb|EFQ88825.1| hypothetical protein PTT_15105 [Pyrenophora teres f. teres 0-1]
Length = 614
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVNTPI-TA 72
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + QV N + +A+ F++ + N F+ VT WD +V L E R
Sbjct: 73 LCTSLTTLTWDQVRNAGSFRDAVERFNNFHAEHIAPKNLEFAFVTLDSWDLRVQLPREAR 132
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 133 DKSVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKH 192
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 193 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 238
>gi|451854057|gb|EMD67350.1| hypothetical protein COCSADRAFT_288608 [Cochliobolus sativus
ND90Pr]
Length = 616
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVNTPI-TA 72
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + QV N + +A+ F++ + N F+ VT WD +V L E R
Sbjct: 73 LCTSLTTLTWDQVRNAGSFRDAIERFNNFHAEHIAPKNLEFAFVTLDSWDLRVQLPREAR 132
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 133 DKAVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKH 192
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 193 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 238
>gi|189210006|ref|XP_001941335.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977428|gb|EDU44054.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 614
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVNTPI-TA 72
Query: 58 FCKELTGIQQHQVDNGITLGEAL-YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + QV N + +A+ F++ + N F+ VT WD +V L E R
Sbjct: 73 LCTSLTTLTWDQVRNAGSFRDAVERFNNFHAEHIAPQNLEFAFVTLDSWDLRVQLPREAR 132
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 133 DKSVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKH 192
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 193 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 238
>gi|163753213|ref|ZP_02160337.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
gi|161326945|gb|EDP98270.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
Length = 183
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 25/183 (13%)
Query: 5 VVIDFEATC---DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+V+D EATC D E + EIIE + SG+I V P + + FC E
Sbjct: 8 LVVDLEATCWEQDGEYQRNHSEIIEIGICELDVPSGKISKQQGILVIPEHSEI-SRFCTE 66
Query: 62 LTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LT I V +G++ +A+ +L +++ ++ ++ +D ++E ECR K++
Sbjct: 67 LTSITPEMVAQDGVSFEDAID-----ILFDEYDSSAYTWASYGAYDRNKVME-ECRKKQV 120
Query: 121 QKPAYFNQWINLRVPFSKVFGDVRCN-LKEAVELAGLIWQ------GRVHCGLDDAINIA 173
P + +Q IN++ F RCN ++ + +A + Q GR H G+DDA N A
Sbjct: 121 DFP-FGDQHINVKEEFK------RCNRMRRGIGMARALKQLRIPLEGRHHRGVDDANNTA 173
Query: 174 RLL 176
++L
Sbjct: 174 KIL 176
>gi|444516848|gb|ELV11300.1| Tankyrase-1 [Tupaia chinensis]
Length = 1316
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 36/145 (24%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
++Y VIDFEATC E P+ EIIEFP V+++ + EI
Sbjct: 44 YDYICVIDFEATC--EEGNPPEFTHEIIEFPIVLLNTHTLEI------------------ 83
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
QVD T + L W L ++G +S++T WD L +C
Sbjct: 84 ----------DQVDRADTFPQVLKKVTDWMKLKELG-TKYKYSILTDGSWDMSKFLNMQC 132
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVF 140
++ +++ P++ +WIN+R + +
Sbjct: 133 QLSRLRYPSFAKKWINIRKSYGNFY 157
>gi|396492219|ref|XP_003843744.1| hypothetical protein LEMA_P013950.1 [Leptosphaeria maculans JN3]
gi|312220324|emb|CBY00265.1| hypothetical protein LEMA_P013950.1 [Leptosphaeria maculans JN3]
Length = 617
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 LDLYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVHTPI-TA 72
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + QV N + +A+ + + + N F+ VT WD +V L E R
Sbjct: 73 LCTSLTTLTYDQVRNAGSFRDAIERFSAFASEHITPKNKEFAFVTLDSWDLRVQLPREAR 132
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 133 DKAVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKH 192
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 193 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 238
>gi|361127515|gb|EHK99482.1| putative Uncharacterized RNA-binding protein C17H9.04c [Glarea
lozoyensis 74030]
Length = 637
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKNCEELYRDSVLVKPINTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFSFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVTASAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 235
>gi|336124142|ref|YP_004566190.1| KapD [Vibrio anguillarum 775]
gi|335341865|gb|AEH33148.1| KapD [Vibrio anguillarum 775]
Length = 176
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + G I+ Q YVRP + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDVQLGTIVKRAQYYVRPEQDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L + K N V+W D +L EC K
Sbjct: 62 SELTGITPRKIEKQGRPLAGVIQSMVK-----NFGGPNKIYVSWGRDD--QILAKECEQK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I P F+++INL + + + R + A E G+ W+GR H DA N+A+L
Sbjct: 115 GIVMP--FSEFINLATLYRIQQRMKEKRIGHRAAQEAQGIEWEGRQHSAYVDAYNLAKL 171
>gi|213962982|ref|ZP_03391241.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
gi|213954323|gb|EEB65646.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
Length = 183
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 5 VVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
++ID EATC + P+ EIIE ++ ++GEI ++PT + + FC
Sbjct: 6 IIIDLEATC--WEGIPPKGEVSEIIEIGICLLDTLTGEISDNRGILIKPTHSKI-SPFCT 62
Query: 61 ELTGIQQHQV-DNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+LT + V G++ EA +L+ ++ ++ ++D + ML+ +C ++K
Sbjct: 63 QLTTLTPELVAREGVSFEEAF-----QILKKEYQAYQYTWASYGNYD-RNMLQKQCALRK 116
Query: 120 IQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ P N+ IN++ F +V R + +A+ + G H G DDA NIA+++
Sbjct: 117 LPYPMR-NEHINVKELFQEVTQHPKRLGMHQALNYLKIPLVGTHHRGKDDAYNIAKIM 173
>gi|365539703|ref|ZP_09364878.1| KapD [Vibrio ordalii ATCC 33509]
Length = 176
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
+ V D E C E + EIIE + G I+ Q YVRP + + + FC
Sbjct: 3 YNRVVCFDLEMCCWNENGVGTTGEIIEVGLAEIDVQLGTIVKRAQYYVRPEQDEI-SLFC 61
Query: 60 KELTGIQQHQVDN-GITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI +++ G L + K N V+W D +L EC K
Sbjct: 62 SELTGITPRKIEKQGRPLAGVIQSMVK-----NFGGPNKIYVSWGRDD--QILAKECGQK 114
Query: 119 KIQKPAYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I P F+++INL + + + R + A E G+ W+GR H DA N+A+L
Sbjct: 115 GIVMP--FSEFINLATLYRIQQRMKEKRIGHRAAQEAQGIEWEGRQHSAYVDAYNLAKL 171
>gi|84387084|ref|ZP_00990106.1| hypothetical protein V12B01_03993 [Vibrio splendidus 12B01]
gi|84377945|gb|EAP94806.1| hypothetical protein V12B01_03993 [Vibrio splendidus 12B01]
Length = 176
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + VSG I+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSEDGVGTTGEIIEIGLAEIDLVSGTIVKRAQYYVKPEKDEV-SLFCAELT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI +++ G L K +++ W D ++L EC K I+ P
Sbjct: 66 GITPRKIEKQ---GRPLESVIKSMIK-NFGGPKKIYAAWGRDD--LILHKECIEKGIEPP 119
Query: 124 AYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
F++++N+ + + R + A E + W+GR H G DA N+A+L ++
Sbjct: 120 --FSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|323141646|ref|ZP_08076527.1| exonuclease [Phascolarctobacterium succinatutens YIT 12067]
gi|322413861|gb|EFY04699.1| exonuclease [Phascolarctobacterium succinatutens YIT 12067]
Length = 216
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 19/193 (9%)
Query: 4 YVVIDFEATCDKERNLHPQ----EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLT--- 56
++V+DFE T + P+ EIIE +V + G Q++V+P F P
Sbjct: 4 FLVVDFEFTTYERPVGRPRGFFSEIIEIGAVKLDGEPLTDCGRIQSFVKPHFYPKQAKDS 63
Query: 57 -DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESEC 115
DFC Q ++ + E ++ T F V W D +V L++ C
Sbjct: 64 MDFCMITAKDMQQAIEFPAMVQELAALYES-------GETYF--VAWGTEDYKV-LQTGC 113
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDAINIAR 174
KI+ P + +++L + + GD LK+A E + G H DDA N +
Sbjct: 114 ERHKIENPVKYEDYLDLALAYRLWKGDDYTTGLKKATEEQEVNTAGLWHTAFDDANNTGK 173
Query: 175 LLSVIMRRGFKFS 187
LL + RG+K
Sbjct: 174 LLIEMFNRGWKLE 186
>gi|358389624|gb|EHK27216.1| hypothetical protein TRIVIDRAFT_34131 [Trichoderma virens Gv29-8]
Length = 621
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANSLEEITHESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAISRFDTFATEYLTSKNLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS Q +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPAQDHPDVLT 235
>gi|400601008|gb|EJP68676.1| centractin (ARP1) [Beauveria bassiana ARSEF 2860]
Length = 612
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 51/230 (22%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
E YVVI TCD+ V V+ S EI V+P P+ T C
Sbjct: 12 ERYVVIHVATTCDEH------------GVYVTKDSAEITH-ESVLVKPVNTPI-TPLCTS 57
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRIKKI 120
LT + V N T +A+ D + + + N +F+ VT WD +V L E R K +
Sbjct: 58 LTTLTWEHVRNAGTFRDAISRFDAFATEYLTSKNLDFAFVTLDAWDLRVQLPREARDKAV 117
Query: 121 QKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGL-- 166
P Y ++ +LR P S FG + N+ A+E+ + + L
Sbjct: 118 VLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKHNLPF 177
Query: 167 --------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
++AI +AR+L ++R KS PQ +P+ LT
Sbjct: 178 HLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPQEHPDVLT 219
>gi|283780009|ref|YP_003370764.1| exonuclease RNase T and DNA polymerase III [Pirellula staleyi DSM
6068]
gi|283438462|gb|ADB16904.1| Exonuclease RNase T and DNA polymerase III [Pirellula staleyi DSM
6068]
Length = 196
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ +V+D E+TC + H Q EIIE V + +A ++P L++F
Sbjct: 5 LDQVLVVDVESTCWQGPPPHGQLSEIIEVGLCTVDVRKRQRLAKRCIMIKPV-RSRLSEF 63
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C LT ++ + TL +A+ +L+ + + +W D+D + E C K
Sbjct: 64 CTRLTTLRDEDLVGAGTLADAVS-----ILKREYRSPDRLWASWGDYD-RRQFERVC--K 115
Query: 119 KIQKPAYFN-QWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
++ P F +N++ F+ ++GD R + EA E G+ +G H G+DDA NIA +
Sbjct: 116 ELTVPYPFGVSHLNIKTLFAVLYGDNREIGVDEACERIGIPMEGTHHRGVDDAWNIAAIF 175
Query: 177 SVIM 180
+M
Sbjct: 176 CHLM 179
>gi|256375737|ref|YP_003099397.1| exonuclease RNase T and DNA polymerase III [Actinosynnema mirum DSM
43827]
gi|255920040|gb|ACU35551.1| Exonuclease RNase T and DNA polymerase III [Actinosynnema mirum DSM
43827]
Length = 180
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ +V+D EATC +IIE GE + VRPT + + F
Sbjct: 5 LDRVLVVDVEATCWEGAPPGGQVSDIIEIGVCEYDVALGERVERHSLLVRPTRSEV-SPF 63
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
C LT + Q QV G+ G A L ++G ++ ++ D+D + + +C
Sbjct: 64 CTSLTTLTQEQVGRGVDFGVAC----ARLRELGSRERVWA--SYGDYD-RNQFQRQCADL 116
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
+ P + + +N++ F+ G R + +A+ LAGL G H G DDA NIA LL
Sbjct: 117 GVAYP-FGPRHLNVKTLFALSRGLHREVGMAQALALAGLPLDGTHHRGDDDAWNIAALLG 175
Query: 178 VIMRR 182
++ R
Sbjct: 176 TLLVR 180
>gi|190347963|gb|EDK40337.2| hypothetical protein PGUG_04435 [Meyerozyma guilliermondii ATCC
6260]
Length = 528
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSV---VVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVV++ TCD+ + + E S+ +V + + + QT+VRPT P +T +
Sbjct: 3 DVYVVVNTATTCDETNSYVTPDSTELISISWCIVDASTLQELTRNQTFVRPTNTP-ITPW 61
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKW--LLQMGLNNTNFSVVTWSDWDCQVMLESECR 116
C ++ GI V N T +A+ DK ++ + FS V++ + +V + E R
Sbjct: 62 CTQIHGISWEHVRNAGTFRDAI---DKLEAAVKEYVGEKEFSFVSYDAFPLRVHIPREAR 118
Query: 117 IKKIQKPAYFNQ--WINLRVPFSKVFGDVRCNLKEAVE 152
K ++ P Y Q LR +++ G +L++ VE
Sbjct: 119 DKSVELPGYLKQPRVFELRSEYARWKGREGTSLRDMVE 156
>gi|254572319|ref|XP_002493269.1| Protein of unknown function, rich in asparagine residues
[Komagataella pastoris GS115]
gi|238033067|emb|CAY71090.1| Protein of unknown function, rich in asparagine residues
[Komagataella pastoris GS115]
gi|328352715|emb|CCA39113.1| Uncharacterized RNA-binding protein C17H9.04c [Komagataella
pastoris CBS 7435]
Length = 641
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVS-GVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+V+ T ++ P EIIE V++ G + EI+ +P F +T
Sbjct: 3 DRYIVLHINTTANESSQQFKRDPSEIIELAWVLLDPGTNFEIVGRGSVLAKP-FNTPITP 61
Query: 58 FCKELTGIQQHQVDNGITLGEAL----YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLES 113
C +T + V N +L +A+ F D L+ GL+ FS +T + WD ++ L
Sbjct: 62 LCTSMTTLTWESVKNAGSLKDAVEELSRFIDSNLVSNGLS---FSFITLNAWDLRLKLPK 118
Query: 114 ECRIKKIQKPAYFN--QWINLRVPF 136
E R + I PAY + ++ +LR F
Sbjct: 119 ESRERSIALPAYLDLPKYFDLRKEF 143
>gi|407926037|gb|EKG19008.1| hypothetical protein MPH_03698 [Macrophomina phaseolina MS6]
Length = 633
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V N + +A+ D++ + L+ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNSGSFRDAINRFDQFANEHLLSKNHEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALSNICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS P +P+ LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 235
>gi|384490325|gb|EIE81547.1| hypothetical protein RO3G_06252 [Rhizopus delemar RA 99-880]
Length = 147
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 61 ELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSV-VTWSDWDCQVMLESECRIKK 119
+LTGI Q VDN + L ++L + L ++ ++ VT +D + + +
Sbjct: 2 KLTGITQDTVDNSPVFIDVLNQFQEFLAKYSLFQSSTAIFVTDGPFDIRDFITKQITHSN 61
Query: 120 IQ-KPAYFN-QWINLRVPFSKVFGDVRC-NLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I +PAYFN WIN+R F + + N+ + + ++GR H GLDDA N+A +
Sbjct: 62 IDPRPAYFNLPWINIRKLFKDFYHQTQSKNIASMLSHLEMSFEGREHSGLDDARNLAYIA 121
Query: 177 SVIMRRG 183
+ G
Sbjct: 122 KRMFEDG 128
>gi|86146253|ref|ZP_01064578.1| hypothetical protein MED222_16116 [Vibrio sp. MED222]
gi|218709772|ref|YP_002417393.1| hypothetical protein VS_1784 [Vibrio splendidus LGP32]
gi|85835964|gb|EAQ54097.1| hypothetical protein MED222_16116 [Vibrio sp. MED222]
gi|218322791|emb|CAV18968.1| hypothetical protein VS_1784 [Vibrio splendidus LGP32]
Length = 176
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 12/179 (6%)
Query: 5 VVIDFEATCDKERNLHPQ-EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
V D E C E + EIIE + SG I+ Q YV+P + + + FC ELT
Sbjct: 7 VCFDLEMCCWSEDGVGTTGEIIEVGLAEIDLASGTIVKRAQYYVKPEKDEV-SLFCAELT 65
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI +++ G L K +++ W D ++L EC K I+ P
Sbjct: 66 GITPRKIEK---QGRPLESVIKSMIK-NFGGPKKIYAAWGRDD--LILHKECIEKGIEPP 119
Query: 124 AYFNQWINLRVPF--SKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
F++++N+ + + R + A E + W+GR H G DA N+A+L ++
Sbjct: 120 --FSEFLNIATLYRVQNRLKEKRIGHRAAQEAKNIEWEGRQHSGYVDAYNLAKLALTML 176
>gi|409051696|gb|EKM61172.1| hypothetical protein PHACADRAFT_247611, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 136
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 100 VTWSDWDCQVMLESECRIKKIQKP--------AYFNQWINLRVPFSKVFGDVRCNLKEAV 151
VT DWD + ML + + + A +N+WIN++ PF K F R N+
Sbjct: 19 VTCGDWDLKTMLPKQLSLVEADHGLDESGRVVAPYNRWINIKTPFKKRFNMTRFNVSMPA 78
Query: 152 ELAGLI--WQGRVHCGLDDAINIARLLSVIMRRGFKFSITKS 191
L L +GR H G+DD NI R++ ++ G+ + T++
Sbjct: 79 MLKKLQLELEGRHHSGIDDCKNILRIIEKMIATGWDPNTTQA 120
>gi|162452505|ref|YP_001614872.1| exonuclease [Sorangium cellulosum So ce56]
gi|161163087|emb|CAN94392.1| putative exonuclease [Sorangium cellulosum So ce56]
Length = 184
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 1 FEYYVVIDFEATC------DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPL 54
+ +VID EATC E N EIIE + S VRP
Sbjct: 5 LDLILVIDVEATCWDGDPPPGEEN----EIIEIGVCPLEVASCRRRERRSILVRPE-RSR 59
Query: 55 LTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESE 114
++ FC LT + Q VD G++ EA L+ L + ++ D+D + M E +
Sbjct: 60 VSPFCTALTTLTQADVDAGVSFREACA-----TLRSELKAQDRLWASYGDYD-RRMFERQ 113
Query: 115 CRIKKIQKPAYFNQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINI 172
C+ + + P + +N++ F+ R + EA+E AGL G H G+DDA NI
Sbjct: 114 CQSRGVPLP-FGPSHLNVKSLFAVTHALSREVGMAEALERAGLPLAGTHHRGVDDAHNI 171
>gi|229086122|ref|ZP_04218342.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
Rock3-44]
gi|228697181|gb|EEL49946.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
Rock3-44]
Length = 281
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 2 EYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
+YY+V D E ++ P E+++ ++ V + +I F + V+PT LT +
Sbjct: 5 KYYIVFDVERNFRPYKSQDPSEVVDIGAIKVEASTMRMIGRFASLVKPT--APLTRHTTK 62
Query: 62 LTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ 121
LTGI + + + + + LQ +N F VTW D + L +C++ I+
Sbjct: 63 LTGITKQDLKEVEMFPKVI----EQFLQFTEDNCMF--VTWGKEDYK-FLAQDCQLHHIE 115
Query: 122 KPAYFNQW-INLRV----PFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P+ N+ +L+ + ++F D +LK AVE L W+G+ H DA N +
Sbjct: 116 CPSIENERKFDLQKFVFQAYEELFIDT-PSLKFAVEQFALEWEGKQHRAYADAKNTLNIF 174
Query: 177 SVI---------MRRGFKFSITKS--LTPQANPNCLTW 203
+ +R + +TK+ LT +A W
Sbjct: 175 LKVCKEKDIYKRYKRNEELVLTKNGVLTEKAKKKMKRW 212
>gi|334129010|ref|ZP_08502885.1| hypothetical protein HMPREF9081_2473 [Centipeda periodontii DSM
2778]
gi|333385744|gb|EGK56971.1| hypothetical protein HMPREF9081_2473 [Centipeda periodontii DSM
2778]
Length = 219
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 4 YVVIDFEA--TCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E + R++ + EIIE +V ++ E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVAKEHRDIRRKLNGEIIEIGAVRLNE-DFEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q +V E+ + W+ G T + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEKVAGRPVFSESFHAFVDWI---GAAETK--IYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
PA+ W++ R V + F D LK A+ G ++G H L DAIN
Sbjct: 115 ---LPAFDVSWLDTRWVDLQQAFDDRLGLHNSLALKHALGAMGRSFEGSQHSALADAINT 171
Query: 173 ARLLSVIMRRGFKFSIT 189
+ +L+ +M+ KF T
Sbjct: 172 SAVLA-LMQDDAKFRET 187
>gi|169776033|ref|XP_001822483.1| RNA binding protein (Arp) [Aspergillus oryzae RIB40]
gi|83771218|dbj|BAE61350.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867884|gb|EIT77122.1| RNA-binding Ran Zn-finger protein [Aspergillus oryzae 3.042]
Length = 613
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D++ + ++ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAIARFDEFAKEHLISKNLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + PAY ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPAYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQTSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 235
>gi|423574861|ref|ZP_17550980.1| hypothetical protein II9_02082 [Bacillus cereus MSX-D12]
gi|401211131|gb|EJR17880.1| hypothetical protein II9_02082 [Bacillus cereus MSX-D12]
Length = 281
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + +II F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + N + + ++++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHAVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|340959826|gb|EGS21007.1| putative asparagine-rich protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 615
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y+VI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 14 DRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDANSLEELHRESILVKPVNTPI-TPL 72
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D ++ + + N +F VT WD +V L E R
Sbjct: 73 CTSLTTLTWEHVRNAGTFRDAINRFDAFVNEHLTSQNLDFVFVTLEAWDLRVQLPREARD 132
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL--------- 156
K + P Y ++ LR P S FG N+ A+E+ +
Sbjct: 133 KSVVLPPYLQHSRAFELRTEYQRWQQHHPESLPFGPSSLANICAALEVEPVQSSAPIKHN 192
Query: 157 -------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ L++A+ +AR+L ++R KS P +P+ LT
Sbjct: 193 LPFHLQSLAPASPRRALEEALTLARVLRGLIR--------KSQPPHEHPDVLT 237
>gi|156063312|ref|XP_001597578.1| hypothetical protein SS1G_01772 [Sclerotinia sclerotiorum 1980]
gi|154697108|gb|EDN96846.1| hypothetical protein SS1G_01772 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 626
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 12 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKTCDELHRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V T +A+ D + + + N +FS VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRTAGTFRDAINRFDTFAAEHLTSQNLDFSFVTLDSWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQASAPIKH 190
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 191 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 236
>gi|401563833|ref|ZP_10804768.1| exonuclease [Selenomonas sp. FOBRC6]
gi|400189453|gb|EJO23547.1| exonuclease [Selenomonas sp. FOBRC6]
Length = 219
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 4 YVVIDFEAT-CDKE----RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E KE R EIIE +V ++ + E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVSKEHREVRRKLNGEIIEIGAVRLNE-NFEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q QV E+ + W + + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEQVAGRPAFSESFHSFVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
PA+ W++ R V + F D LK A+ G ++G H L DA+N
Sbjct: 115 ---LPAFDVGWLDARWVDLQQAFDDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNT 171
Query: 173 ARLLSVIMRRGFKFSIT 189
+ +L+ +M+ KF T
Sbjct: 172 SAVLA-LMQDDAKFRET 187
>gi|347832764|emb|CCD48461.1| hypothetical protein [Botryotinia fuckeliana]
Length = 629
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 12 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKTCDELHRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V T +A+ D + + + N +FS VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRTAGTFRDAINRFDTFAAEHLTSQNLDFSFVTLDSWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQASAPIKH 190
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 191 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 236
>gi|206975330|ref|ZP_03236243.1| exonuclease family protein [Bacillus cereus H3081.97]
gi|217960931|ref|YP_002339499.1| exonuclease [Bacillus cereus AH187]
gi|375285435|ref|YP_005105874.1| DNA polymerase III subunit epsilon [Bacillus cereus NC7401]
gi|423353220|ref|ZP_17330847.1| hypothetical protein IAU_01296 [Bacillus cereus IS075]
gi|423374666|ref|ZP_17352004.1| hypothetical protein IC5_03720 [Bacillus cereus AND1407]
gi|423567587|ref|ZP_17543834.1| hypothetical protein II7_00810 [Bacillus cereus MSX-A12]
gi|206746232|gb|EDZ57626.1| exonuclease family protein [Bacillus cereus H3081.97]
gi|217064747|gb|ACJ78997.1| exonuclease family protein [Bacillus cereus AH187]
gi|358353962|dbj|BAL19134.1| DNA polymerase III, epsilon chain [Bacillus cereus NC7401]
gi|401089860|gb|EJP98024.1| hypothetical protein IAU_01296 [Bacillus cereus IS075]
gi|401093954|gb|EJQ02040.1| hypothetical protein IC5_03720 [Bacillus cereus AND1407]
gi|401213646|gb|EJR20385.1| hypothetical protein II7_00810 [Bacillus cereus MSX-A12]
Length = 281
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + +II F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + N + + ++++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHGVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|423604836|ref|ZP_17580729.1| hypothetical protein IIK_01417 [Bacillus cereus VD102]
gi|401243984|gb|EJR50348.1| hypothetical protein IIK_01417 [Bacillus cereus VD102]
Length = 281
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + +II F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + N + + ++++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHAVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|429857771|gb|ELA32619.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEITRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|268568198|ref|XP_002647968.1| Hypothetical protein CBG23882 [Caenorhabditis briggsae]
Length = 311
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 39/202 (19%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVR---PTFEPLLTD 57
F+ +++DF TC++ ++P EII+ SV V + ++I QT+ R P P+L++
Sbjct: 9 FKNLLILDFNTTCEENNYVYPTEIIQM-SVSVLNIRDKLIREDQTFNRFVCPVINPVLSE 67
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
+C TGI Q+ ++ T +D++ V W R
Sbjct: 68 YCARKTGIDQNSINTADTFPVV---YDQF-------------VAW------------LRE 99
Query: 118 KKIQKPAYFNQWINLRVPFSKVFGDVRCN-------LKEAVELAGLIWQGRVHCGLDDAI 170
Q + F QW N+ F + + + + +A + G H +D +
Sbjct: 100 HNFQPSSIFRQWNNITSVFHILLPERNYDNLPGETFVDKASNYYNIEIIGNAHNAVDKST 159
Query: 171 NIARLLSVIMRRGFKFSITKSL 192
+A++ I+ ++T+SL
Sbjct: 160 FLAKITKQILDDNNLITVTRSL 181
>gi|116199179|ref|XP_001225401.1| hypothetical protein CHGG_07745 [Chaetomium globosum CBS 148.51]
gi|88179024|gb|EAQ86492.1| hypothetical protein CHGG_07745 [Chaetomium globosum CBS 148.51]
Length = 626
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVV+ TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 12 DRYVVVHVATTCDEHGVYVTKDSAEVIELGWILLDANTLEELHRESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAVNRFDAFASEHLTSQNLDFVFVTLEAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHCG 165
K + P Y ++ LR P S FG + N+ A+E+ + +
Sbjct: 131 KSVVLPPYLQHSRAFELRTEYQRWQQHHPESLPFGPSLLTNICAALEVEAVQTSAPIKHN 190
Query: 166 L----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 191 LPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 235
>gi|376267409|ref|YP_005120121.1| exonuclease family protein [Bacillus cereus F837/76]
gi|364513209|gb|AEW56608.1| exonuclease family protein [Bacillus cereus F837/76]
Length = 281
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ +P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSENPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|384181351|ref|YP_005567113.1| exonuclease [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324327435|gb|ADY22695.1| exonuclease [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 281
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEQFPQIIEKFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 P-AYFNQWINLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMQKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|300117664|ref|ZP_07055446.1| exonuclease [Bacillus cereus SJ1]
gi|298724997|gb|EFI65657.1| exonuclease [Bacillus cereus SJ1]
Length = 261
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDLMGVEKFPQII---EKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|423550768|ref|ZP_17527095.1| hypothetical protein IGW_01399 [Bacillus cereus ISP3191]
gi|401189152|gb|EJQ96212.1| hypothetical protein IGW_01399 [Bacillus cereus ISP3191]
Length = 279
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLKKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|429737126|ref|ZP_19270998.1| exonuclease [Selenomonas sp. oral taxon 138 str. F0429]
gi|429153270|gb|EKX96057.1| exonuclease [Selenomonas sp. oral taxon 138 str. F0429]
Length = 219
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 4 YVVIDFEAT-CDKE----RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E KE R EIIE +V ++ + E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVSKEHREVRRKLNGEIIEIGAVRLNE-NFEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q QV E+ + W + + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEQVAGRPAFSESFHSFVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
PA+ W++ R V + F D LK A+ G ++G H L DA+N
Sbjct: 115 ---LPAFDVGWLDARWVDLQQAFDDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNT 171
Query: 173 ARLLSVI 179
+ +L+++
Sbjct: 172 SAVLALM 178
>gi|313895399|ref|ZP_07828956.1| exonuclease [Selenomonas sp. oral taxon 137 str. F0430]
gi|402303765|ref|ZP_10822849.1| exonuclease [Selenomonas sp. FOBRC9]
gi|312976294|gb|EFR41752.1| exonuclease [Selenomonas sp. oral taxon 137 str. F0430]
gi|400377269|gb|EJP30148.1| exonuclease [Selenomonas sp. FOBRC9]
Length = 219
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 43 FQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTW 102
FQ YV P + L+ ELTGI Q QV E+ W+ G + T + +W
Sbjct: 46 FQCYVCPEY-GLVKKHITELTGITQEQVSGQRVFAESFKNFVDWI---GASETK--IYSW 99
Query: 103 SDWDCQVMLESECRIKKIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGL 156
S D + L ECR+K P + W+++R V + F D LK A+ G
Sbjct: 100 SMSDIK-QLRKECRLK---VPDFDVNWLDMRWVDLQQAFDDRLGLHNSLALKHALGAMGR 155
Query: 157 IWQGRVHCGLDDAINIARLLSVIMRRGFKFSIT 189
++G H L DAIN + +L+ +M+ KF T
Sbjct: 156 RFEGTQHSALADAINTSAVLT-LMQDDEKFRET 187
>gi|166032316|ref|ZP_02235145.1| hypothetical protein DORFOR_02019 [Dorea formicigenerans ATCC
27755]
gi|166028039|gb|EDR46796.1| exonuclease [Dorea formicigenerans ATCC 27755]
Length = 218
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 4 YVVIDFEA-----TCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
Y+VID E +R + E I+ +V++ + I +V P ++ F
Sbjct: 3 YLVIDLEMCKVPRDYRSKRYKYANETIQIGAVLLDE-EFKRIGTLSQFVHPE-HGVIDYF 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESECRI 117
+ LTGI+ QV + L +AL W+ + + V WS D Q++ E + +
Sbjct: 61 IENLTGIKNGQVKHTPRLQKALLHMLNWI-----GDREYKVYAWSGSDRAQILHEIKAKN 115
Query: 118 KKIQKPAYF---NQWINLRVPFSKVFGDVR-CNLKEAVELAGLIWQGRVHCGLDDAINIA 173
+K A F ++W++ + F K + R +L+EA+ A + +GR H GL+DA+N
Sbjct: 116 IVDEKIASFMEESRWVDYQDIFMKRYEMSRKMSLEEALGRADIDPEGRFHDGLNDAVNTG 175
Query: 174 RLLS 177
L+
Sbjct: 176 LLIE 179
>gi|406867105|gb|EKD20144.1| RNA binding protein (Arp) [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 634
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 12 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSCEELHRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + + +FS VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQSLDFSFVTLDSWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|346974247|gb|EGY17699.1| asparagine-rich protein [Verticillium dahliae VdLs.17]
Length = 628
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEIVRDSALVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAVNRFDAFANEHLTSQNLDFVFVTLDAWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|453084246|gb|EMF12291.1| hypothetical protein SEPMUDRAFT_68057 [Mycosphaerella populorum
SO2202]
Length = 716
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQT-YVRPTFEPLLT 56
FE Y VI TCD+ E+IE VVV + E Q+ VRP P+ T
Sbjct: 67 FEKYCVIHIATTCDEHGVYVTKDSAEVIEIGWVVVDAQNPERELHRQSVLVRPVNTPI-T 125
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSDWDCQV 109
C LT + V N T +A+ D++ + ++ F+ VT + WD +V
Sbjct: 126 PLCTSLTTLTWEHVKNAGTFRDAITAFDQFAQEHLVHKDAGPSAAPTFAFVTLTPWDLRV 185
Query: 110 MLESECRIKKIQKPAYFNQWI 130
L E R K + PAY I
Sbjct: 186 QLPREARDKNVVLPAYLQHPI 206
>gi|317027139|ref|XP_001400207.2| RNA binding protein (Arp) [Aspergillus niger CBS 513.88]
Length = 612
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 10 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHHESVLVKPVNTPI-TP 68
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 69 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 128
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + PAY ++ +LR P S FG N+ A+E+ +
Sbjct: 129 DKAVVLPAYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 188
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 189 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 234
>gi|452982144|gb|EME81903.1| hypothetical protein MYCFIDRAFT_50263 [Pseudocercospora fijiensis
CIRAD86]
Length = 708
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 12/141 (8%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQT-YVRPTFEPLLT 56
FE Y +I TCD+ E+IE VVV + E Q+ VRP P+ T
Sbjct: 59 FEKYCIIHIATTCDEHGVYVTKDSAEVIEIGWVVVDAQNPERELHRQSVLVRPVNTPI-T 117
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNN-------TNFSVVTWSDWDCQV 109
C LT + V N + +A+ D++ + +N F+ +T + WD +V
Sbjct: 118 PLCTSLTTLTWEHVKNAGSFRDAISAFDQYAQENLINKDAGPGAPPTFAFLTLTPWDLRV 177
Query: 110 MLESECRIKKIQKPAYFNQWI 130
L E R K + PAY I
Sbjct: 178 QLPREARDKNVVLPAYLQHPI 198
>gi|310794355|gb|EFQ29816.1| hypothetical protein GLRG_04960 [Glomerella graminicola M1.001]
Length = 618
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEITRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG + N+ A+E+ +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 190
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRR 182
+ +++A+ +AR+L ++R+
Sbjct: 191 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIRK 224
>gi|348025956|ref|YP_004765761.1| exonuclease [Megasphaera elsdenii DSM 20460]
gi|341822010|emb|CCC72934.1| exonuclease [Megasphaera elsdenii DSM 20460]
Length = 221
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 5 VVIDFEAT-----CDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFC 59
V +DFE + R + EIIE +V + G+ I+ ++ YV P + + C
Sbjct: 4 VFVDFEMNPIGRDQKEARRICKGEIIEIGAVKIDE-DGKEISSYKEYVLPEYTTAMNQTC 62
Query: 60 KELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKK 119
+ELTGI + +A W + G N + + WS+ D + L+ E R+K+
Sbjct: 63 QELTGITMEMLAGKPHFRQAFDHFLTWCNE-GCPNA-YEMFAWSENDWR-QLDCELRLKE 119
Query: 120 IQKPA-----YFNQWINLRVPFSKVFG-DVRCNLKEAVELAGLIWQGRVHCGLDDAINIA 173
I + + W N + + + G D +L +AV G + G++H L DA N +
Sbjct: 120 IDEHDDRVRWMLDHWQNFQQIYCNLLGLDKVISLDKAVSTLGETFDGQMHDALWDARNTS 179
Query: 174 RLLSVIMRRGFKFSITKSLTPQANP 198
+L + ++ I + + P
Sbjct: 180 KLYVLSKKKEEFRDIMQPIIDATKP 204
>gi|358367883|dbj|GAA84501.1| RNA binding protein (Arp) [Aspergillus kawachii IFO 4308]
Length = 612
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 10 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHHESVLVKPVNTPI-TP 68
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 69 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 128
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + PAY ++ +LR P S FG N+ A+E+ +
Sbjct: 129 DKAVVLPAYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 188
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 189 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 234
>gi|302416745|ref|XP_003006204.1| asparagine-rich protein [Verticillium albo-atrum VaMs.102]
gi|261355620|gb|EEY18048.1| asparagine-rich protein [Verticillium albo-atrum VaMs.102]
Length = 311
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEIVRDSALVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAVNRFDAFANEHLTSQNLDFVFVTLDAWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|89097554|ref|ZP_01170443.1| exonuclease [Bacillus sp. NRRL B-14911]
gi|89087850|gb|EAR66962.1| exonuclease [Bacillus sp. NRRL B-14911]
Length = 320
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Query: 4 YVVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
YV DFE C + L E I +V ++ E ++ F Y++P L+ FCK L
Sbjct: 7 YVFFDFEMLCSNKGMLFEDMEAIRLGAVKYDLIT-EKLSFFDEYIKPENHKPLSMFCKRL 65
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI+ + + + W+ G+ T F +WS D + R
Sbjct: 66 TGIEDKDLRDADRFADVFSTFLYWV--NGVKKTRF--YSWSKSDLSRLNADAARHG---I 118
Query: 123 PAYFNQWINLR-VPFSKVFGDVRCN----LKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
P+ + IN R V F +VF + N ++ A+ L GL + G H + D+ N R+
Sbjct: 119 PSATIEKINSRYVDFQEVFSNRAANNTPSVENALALYGLDFVGETHNPMFDSYNTLRIFF 178
Query: 178 VIMR 181
R
Sbjct: 179 AFER 182
>gi|49186337|ref|YP_029589.1| exonuclease [Bacillus anthracis str. Sterne]
gi|167637136|ref|ZP_02395416.1| exonuclease family protein [Bacillus anthracis str. A0193]
gi|190564581|ref|ZP_03017502.1| exonuclease family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227813635|ref|YP_002813644.1| exonuclease [Bacillus anthracis str. CDC 684]
gi|229601907|ref|YP_002867732.1| exonuclease [Bacillus anthracis str. A0248]
gi|254686103|ref|ZP_05149962.1| exonuclease [Bacillus anthracis str. CNEVA-9066]
gi|254723504|ref|ZP_05185292.1| exonuclease [Bacillus anthracis str. A1055]
gi|254738576|ref|ZP_05196279.1| exonuclease [Bacillus anthracis str. Western North America USA6153]
gi|254752894|ref|ZP_05204930.1| exonuclease [Bacillus anthracis str. Vollum]
gi|254759166|ref|ZP_05211192.1| exonuclease [Bacillus anthracis str. Australia 94]
gi|421508154|ref|ZP_15955069.1| exonuclease [Bacillus anthracis str. UR-1]
gi|421637138|ref|ZP_16077736.1| exonuclease [Bacillus anthracis str. BF1]
gi|49180264|gb|AAT55640.1| exonuclease family protein [Bacillus anthracis str. Sterne]
gi|167514643|gb|EDR90009.1| exonuclease family protein [Bacillus anthracis str. A0193]
gi|190563898|gb|EDV17862.1| exonuclease family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227004277|gb|ACP14020.1| exonuclease family protein [Bacillus anthracis str. CDC 684]
gi|229266315|gb|ACQ47952.1| exonuclease family protein [Bacillus anthracis str. A0248]
gi|401821685|gb|EJT20840.1| exonuclease [Bacillus anthracis str. UR-1]
gi|403395934|gb|EJY93172.1| exonuclease [Bacillus anthracis str. BF1]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|380487400|emb|CCF38064.1| hypothetical protein CH063_09255 [Colletotrichum higginsianum]
Length = 619
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ S E I V+P P+ T
Sbjct: 12 IDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSLEEITRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRNAGTFRDAINRFDTFANEHLTSQNLDFVFVTLDAWDLRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG + N+ A+E+ +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVQSSAPIKH 190
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRR 182
+ +++A+ +AR+L ++R+
Sbjct: 191 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIRK 224
>gi|406607282|emb|CCH41337.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 655
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y+VI TCD+ + EIIE +++ + + I+ +RP P+ T
Sbjct: 3 DVYIVIHLSTTCDENGVYVSKDSAEIIEIAWILLDANTLQEISSDSILIRPLNTPI-TAL 61
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D ++ + +F+ VT + WD +V L E R
Sbjct: 62 CTNLTTLTWEHVRNAGTFKDAILKLDSFIHDNITSKQLDFTFVTLNAWDLRVQLPREARD 121
Query: 118 KKIQKPAYF 126
K + P Y
Sbjct: 122 KNVVLPPYL 130
>gi|254744865|ref|ZP_05202543.1| exonuclease [Bacillus anthracis str. Kruger B]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|218904663|ref|YP_002452497.1| exonuclease [Bacillus cereus AH820]
gi|218535470|gb|ACK87868.1| exonuclease family protein [Bacillus cereus AH820]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|118478787|ref|YP_895938.1| exonuclease [Bacillus thuringiensis str. Al Hakam]
gi|196042618|ref|ZP_03109857.1| exonuclease family protein [Bacillus cereus 03BB108]
gi|229185755|ref|ZP_04312932.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus BGSC
6E1]
gi|118418012|gb|ABK86431.1| exonuclease family protein [Bacillus thuringiensis str. Al Hakam]
gi|196026102|gb|EDX64770.1| exonuclease family protein [Bacillus cereus 03BB108]
gi|228597727|gb|EEK55370.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus BGSC
6E1]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|49481766|ref|YP_037618.1| exonuclease [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|52141997|ref|YP_084833.1| exonuclease [Bacillus cereus E33L]
gi|196038482|ref|ZP_03105791.1| exonuclease family protein [Bacillus cereus NVH0597-99]
gi|49333322|gb|AAT63968.1| exonuclease family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975466|gb|AAU17016.1| exonuclease family protein [Bacillus cereus E33L]
gi|196030890|gb|EDX69488.1| exonuclease family protein [Bacillus cereus NVH0597-99]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|228928575|ref|ZP_04091612.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831087|gb|EEM76687.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 281
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G ++ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|367024785|ref|XP_003661677.1| hypothetical protein MYCTH_2133332 [Myceliophthora thermophila ATCC
42464]
gi|347008945|gb|AEO56432.1| hypothetical protein MYCTH_2133332 [Myceliophthora thermophila ATCC
42464]
Length = 617
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 41/233 (17%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 12 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANTLDELHRESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVTLEAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL--------- 156
K + P Y ++ LR P S FG N+ A+E+ +
Sbjct: 131 KSVVLPPYLQHSRAFELRTEYQRWQQHHPESLPFGPSSLANICAALEVEAVQSSAPIKHN 190
Query: 157 -------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS P +P+ LT
Sbjct: 191 LPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 235
>gi|367037635|ref|XP_003649198.1| hypothetical protein THITE_2107592 [Thielavia terrestris NRRL 8126]
gi|346996459|gb|AEO62862.1| hypothetical protein THITE_2107592 [Thielavia terrestris NRRL 8126]
Length = 614
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 41/233 (17%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 12 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANTLDELHRESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTTPNLDFVFVTLEAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHCG 165
K + P Y ++ LR P S FG N+ A+E+ + +
Sbjct: 131 KSVVLPPYLQHSRAFELRTEYQRWQQHHPESLPFGPSSLANICAALEVEAVQSSAPIKHN 190
Query: 166 L----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L ++R KS P +P+ LT
Sbjct: 191 LPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPDVLT 235
>gi|440632612|gb|ELR02531.1| hypothetical protein GMDG_01056 [Geomyces destructans 20631-21]
Length = 632
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVV+ TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 13 LDRYVVVHVATTCDEHGVYVTKDSAEVIELGWILLDAKNCDELYRESVLVKPINTPI-TP 71
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + N +FS VT WD +V L E R
Sbjct: 72 LCTSLTTLTWEHVRNAGTFRDAITRFDAFASEHLTSKNLDFSFVTLDSWDLRVQLPREAR 131
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG + N+ A+E+ + +
Sbjct: 132 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSMLSNICAALEVEPVAASAPIKH 191
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++A+ +AR+L RG I KS +P+ LT
Sbjct: 192 NLPFHLQALAPASPRRAMEEAVTLARVL-----RGL---INKSQPAHEHPDVLT 237
>gi|242209587|ref|XP_002470640.1| predicted protein [Postia placenta Mad-698-R]
gi|220730319|gb|EED84178.1| predicted protein [Postia placenta Mad-698-R]
Length = 320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 11/78 (14%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVV-------SGVSGE--IIACFQTYVRP 49
++ ++V+D E TC R +P EIIE+P ++ +G++ E ++ ++++V+P
Sbjct: 99 YDAFLVLDVEGTCVEGTARFDYPNEIIEWPVCLLRWKDKDHNGLAKELEVVDEYRSFVKP 158
Query: 50 TFEPLLTDFCKELTGIQQ 67
T+ P L+DFC LTGI Q
Sbjct: 159 TWRPRLSDFCTNLTGITQ 176
>gi|320590733|gb|EFX03176.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 616
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 IDRYVVIHVATTCDEHGVYVTKDSAEVIEIGWILLDAKNLEELYRESVLVKPINTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V N T +A+ D + + + + +F VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQSLDFVFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG N+ A+E R
Sbjct: 130 DKAVVLPPYLQHSRTFDLRQEYQRWQQHHPESLPFGPSSLSNICAALEALAPASPRRA-- 187
Query: 165 GLDDAINIARLLSVIMRR 182
+++A+ +AR+L ++R+
Sbjct: 188 -MEEAVTLARVLRGLIRK 204
>gi|389635819|ref|XP_003715562.1| asparagine-rich protein [Magnaporthe oryzae 70-15]
gi|351647895|gb|EHA55755.1| asparagine-rich protein [Magnaporthe oryzae 70-15]
gi|440470228|gb|ELQ39309.1| asparagine-rich protein [Magnaporthe oryzae Y34]
gi|440485060|gb|ELQ65056.1| asparagine-rich protein [Magnaporthe oryzae P131]
Length = 629
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 41/263 (15%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVV+ TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 14 DRYVVLHAATTCDEHGVYVTKDSAEVIELGWILLDAKTLEELHHESVLVKPVNTPI-TPL 72
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT+ WD +V L E R
Sbjct: 73 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSQNLDFVFVTFEAWDLRVQLPREARD 132
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL--------- 156
K + P Y ++ +LR P + F N+ A+E+ +
Sbjct: 133 KSVVLPPYLQHSRTFDLRTEYQRWLQHHPEALTFATSTLTNICAALEVEAVQSSAPIKHN 192
Query: 157 -------IWQGRVHCGLDDAINIARLLSVIMRRGFKFS-----ITKSLTPQANPNCLTWN 204
+ +D+AI +AR+L ++R+ +T+ L +A+
Sbjct: 193 LPFHLQALAPASPRRAMDEAITLARVLRGLIRKSQPLQDHPDVLTRPLDARADVRAFLSE 252
Query: 205 RHHFLEPQAMYTPPHTSLIHEFE 227
R L M PH + E E
Sbjct: 253 RSKVLH---MSGLPHDTTQSELE 272
>gi|301055024|ref|YP_003793235.1| exonuclease [Bacillus cereus biovar anthracis str. CI]
gi|300377193|gb|ADK06097.1| exonuclease, RNase T and DNA polymerase III [Bacillus cereus biovar
anthracis str. CI]
Length = 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ +G N+ VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFVQFIGENSI---FVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PRMDKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|425772635|gb|EKV11032.1| RNA binding protein (Arp), putative [Penicillium digitatum PHI26]
gi|425775118|gb|EKV13402.1| RNA binding protein (Arp), putative [Penicillium digitatum Pd1]
Length = 620
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 29/228 (12%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + + + F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAISRFDAFAQEHLTSKHLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHC 164
K + PAY ++ +LR P S FG N+ A+E+ + +
Sbjct: 130 DKAVVLPAYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 189
Query: 165 GLDDAINIARLLSVIMRRGFKFSIT----------KSLTPQANPNCLT 202
L ++ L RR + S+T KS PQ +P LT
Sbjct: 190 NL--PFHLQALAPASPRRAMEESVTLARVLRGLIRKSQPPQDHPEILT 235
>gi|402082047|gb|EJT77192.1| asparagine-rich protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 624
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 14 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKTLEELHRESVLVKPVNTPI-TPL 72
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT+ WD +V L E R
Sbjct: 73 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTSTNLDFVFVTFEAWDLRVQLPREARD 132
Query: 118 KKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 133 KTVVLPPYLQHSRTFDLRTEYQR 155
>gi|378726898|gb|EHY53357.1| hypothetical protein HMPREF1120_01551 [Exophiala dermatitidis
NIH/UT8656]
Length = 612
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 41/264 (15%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDSKTCDELYRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V N + +A+ D + + ++ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRNAGSFRDAISRFDHFAQEHLISKNLEFSFVTLDAWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + PAY ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPAYLQHSRTFDLRSEYARWQQHHPESLPFGPSSLANICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFS-----ITKSLTPQANPNCLTW 203
+ +++A+ +AR+L ++R+ +T+ + +A+ N
Sbjct: 190 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIRKSQPAHEHPEVLTRPMDARADVNAFLK 249
Query: 204 NRHHFLEPQAMYTPPHTSLIHEFE 227
R L M PH + E E
Sbjct: 250 ERSKVLH---MNGLPHDTTQSELE 270
>gi|269797822|ref|YP_003311722.1| exonuclease RNase T and DNA polymerase III [Veillonella parvula DSM
2008]
gi|269094451|gb|ACZ24442.1| Exonuclease RNase T and DNA polymerase III [Veillonella parvula DSM
2008]
Length = 327
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EII+ +V ++ +II F +++P + P + +ELTGI H++++G+ A+ +
Sbjct: 31 EIIQIGAVKLNE-KMDIIDHFTMFIKPQYLPRMHKHVRELTGITTHELNHGVPFKTAMQY 89
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
KW + +++W D ++ E+ + K++ +Y +QW++ ++ +S
Sbjct: 90 FQKWC------GDEYMLLSWGSDDILILREN-LMLHKMKALSY-DQWVDAQIIYS 136
>gi|149179996|ref|ZP_01858501.1| exonuclease [Bacillus sp. SG-1]
gi|148852188|gb|EDL66333.1| exonuclease [Bacillus sp. SG-1]
Length = 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 4 YVVIDFEATCDKERNL--HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
++ DFE CD +R + E I +V + + I F Y++P + L+DFCK+
Sbjct: 7 FIFFDFEMKCD-DRGMAYENMEAIRLGAVKYD-LKTKSITQFDRYIQPATQEPLSDFCKK 64
Query: 62 LTGIQQHQVDNG----ITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESECR 116
LTGI ++ + E LY W+ G+ + F +WS D ++ ++S
Sbjct: 65 LTGINDRDLETADPFPLVFKEFLY----WV--GGVKKSRF--FSWSKSDMSRLKMDSALH 116
Query: 117 ------IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAI 170
I KIQ +++++ + F++ +++ A+ L GL ++G H + DA
Sbjct: 117 GLPSVTIDKIQ-----SRYVDFQQTFTQRVSKDNLSVENALALYGLHFEGEPHNPMYDAY 171
Query: 171 NIARL 175
N ++
Sbjct: 172 NTLQI 176
>gi|169624527|ref|XP_001805669.1| hypothetical protein SNOG_15524 [Phaeosphaeria nodorum SN15]
gi|160705191|gb|EAT77189.2| hypothetical protein SNOG_15524 [Phaeosphaeria nodorum SN15]
Length = 606
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 47/233 (20%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ S ++ V+P P+ T
Sbjct: 14 LDRYLVIHVATTCDEHGVYVTKDSAEVIELGWILLDAKSESVL------VKPVNTPI-TA 66
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + QV N + +A+ + Q N F+ VT WD +V L E R
Sbjct: 67 LCTSLTTLTWDQVRNAGSFRDAIERFTTFA-QEHTKNLEFAFVTLDSWDLRVQLPREARD 125
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFG-DVRCNLKEAVELAGL--------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 126 KAVVLPPYLQHSRTFDLRTEYQRWQAHHPESLPFGSSALTNICAALEVEPVQSSAPIKHN 185
Query: 157 -------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS PQ +P+ LT
Sbjct: 186 LPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPQDHPDVLT 230
>gi|225865501|ref|YP_002750879.1| exonuclease family protein [Bacillus cereus 03BB102]
gi|225791033|gb|ACO31250.1| exonuclease family protein [Bacillus cereus 03BB102]
Length = 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + I + + +K++ G + VTW D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFI---GFIGEDSIFVTWGKEDYR-FLSHDCTLHSVEC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 174
>gi|225556956|gb|EEH05243.1| asparagine-rich protein [Ajellomyces capsulatus G186AR]
gi|325093580|gb|EGC46890.1| asparagine-rich protein [Ajellomyces capsulatus H88]
Length = 619
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAENCKELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINQFDAFTQEHLLSKNLEFSFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHC 164
K + P Y ++ +LR P S FG N+ A+E+ + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSDLANICAALEVEPMQSSAPIKH 189
Query: 165 GL----------------DDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
L ++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLHGLIR--------KSQPPHEHPEILT 235
>gi|296410712|ref|XP_002835079.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627854|emb|CAZ79200.1| unnamed protein product [Tuber melanosporum]
Length = 596
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 47/237 (19%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE ++++ S E I VRP P+ T
Sbjct: 1 MDRYVVIHVATTCDEHGVYVTKDSAEVIEIGWILLNAKSLEEIHRESVLVRPVNTPI-TP 59
Query: 58 FCKELTGIQQHQVDNGITLGEAL----YFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLES 113
C LT + V + +A+ F ++L+ L+ F+ VT WD +V L
Sbjct: 60 LCTSLTTLTWEHVRTAGSFRDAVNRFDTFAQEYLMSQQLD---FTFVTLDAWDLRVQLPR 116
Query: 114 ECRIKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL----- 156
E R K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 117 EARDKAVVLPPYLQHSRTFDLRTEYTRWQSHHPESLPFGPSSLANICAALEVEPVQSSAP 176
Query: 157 -----------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L RG I KS P+ +P+ L
Sbjct: 177 IKHNLPFHLQALAPASPRRAMEEAITLARVL-----RGL---IKKSQPPEQHPDVLA 225
>gi|398393460|ref|XP_003850189.1| RNA binding zinc finger protein, RanBP2-type [Zymoseptoria tritici
IPO323]
gi|339470067|gb|EGP85165.1| RNA binding zinc finger protein, RanBP2-type [Zymoseptoria tritici
IPO323]
Length = 676
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQT-YVRPTFEPLLT 56
FE Y +I TCD+ E+IE VVV + E Q+ VRP P+ T
Sbjct: 45 FEKYCIIHIATTCDEHGVYVTKDSAEVIEIGWVVVDAQNPERELHRQSVLVRPVNTPI-T 103
Query: 57 DFCKELTGIQQHQVDNGITLGEALYFHDKWLLQ--------MGLNNTNFSVVTWSDWDCQ 108
C LT + V N T +A+ D + + G N T F+ VT + WD +
Sbjct: 104 PLCTSLTTLTWEHVKNAGTFRDAINTFDAYASENLVPKEAGPGANPT-FAFVTLTPWDLR 162
Query: 109 VMLESECRIKKIQKPAYFNQWI 130
V L E R K + P Y +
Sbjct: 163 VQLPREARDKNVVLPPYLQHPV 184
>gi|319653072|ref|ZP_08007175.1| hypothetical protein HMPREF1013_03790 [Bacillus sp. 2_A_57_CT2]
gi|317395244|gb|EFV75979.1| hypothetical protein HMPREF1013_03790 [Bacillus sp. 2_A_57_CT2]
Length = 309
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 18/179 (10%)
Query: 5 VVIDFEATCDKERNL-HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
+ DFE C K L E I +V V +G++ F ++RP + L+ FCKELT
Sbjct: 8 IFFDFEMLCSKNGMLFEDMEAIRLGAVKVELETGKVTG-FDRFIRPQQDSPLSPFCKELT 66
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR------- 116
GI + E F D G+ F +WS D + R
Sbjct: 67 GISDSDLKTADDFSEV--FKDFLFWVGGVKKARF--YSWSTSDILRLKADAFRHNLPQAT 122
Query: 117 IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
I KI K ++++ + F+K ++++A+ L + G H + DA N R+
Sbjct: 123 IDKITK-----RYVDFQAIFTKRASRTAASVEKALSFYDLSFIGEPHHPMYDAYNTLRI 176
>gi|226291198|gb|EEH46626.1| asparagine-rich protein [Paracoccidioides brasiliensis Pb18]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAENCKELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINQFDAFAQEHLLSKNFEFSFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSDLANICAALEVEPMQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLHGLIR--------KSQPPHEHPEILT 235
>gi|150864428|ref|XP_001383238.2| Asparagine-rich protein (ARP protein) [Scheffersomyces stipitis CBS
6054]
gi|149385684|gb|ABN65209.2| Asparagine-rich protein (ARP protein), partial [Scheffersomyces
stipitis CBS 6054]
Length = 460
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 2 EYYVVIDFEATCDKERNL---HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y+V+ TCD+ E+IEF VV + E + VRP P+ T +
Sbjct: 3 DVYIVVHIATTCDESTTYVTKDSSELIEFAWSVVDATTLENLDKESVLVRPVNTPI-TPY 61
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECRI 117
C +L I V N + +A+ D ++ ++ N FS+VT+ +V L E R
Sbjct: 62 CSQLHRITWEHVRNAGSFKDAIVKFDTYIQDNIISKNKEFSLVTFDMSKLRVQLPREARD 121
Query: 118 KKIQKPAYFNQ 128
K + P Y
Sbjct: 122 KAVVLPPYLQH 132
>gi|295659917|ref|XP_002790516.1| asparagine-rich protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281693|gb|EEH37259.1| asparagine-rich protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 621
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDAENCKELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINQFDAFAQEHLLSKNFEFSFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSDLANICAALEVEPMQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLHGLIR--------KSQPPHEHPEILT 235
>gi|416998975|ref|ZP_11939644.1| exonuclease [Veillonella parvula ACS-068-V-Sch12]
gi|333977128|gb|EGL77987.1| exonuclease [Veillonella parvula ACS-068-V-Sch12]
Length = 327
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EII+ +V ++ +II F +++P + P + +ELTGI H++++G+ A+ +
Sbjct: 31 EIIQIGAVKLNE-KMDIIDHFTMFIKPQYLPRMHKHVRELTGITTHELNHGVPFKTAMQY 89
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
KW + +++W D ++ E+ + K++ +Y +QW++ ++ +S
Sbjct: 90 FQKWC------GDEYMLLSWGSDDILILREN-LMLHKMKALSY-DQWVDAQMIYS 136
>gi|328716236|ref|XP_001946855.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 858
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 4 YVVIDFEATCDKERNL---HPQEIIEFPSVVVSGVSGEIIACFQTYVRPT----FEPLLT 56
Y+ + AT + NL QEI+ VVV + ++ Q V+PT E +L+
Sbjct: 45 YLCALYVATAGHQGNLLGSDEQEIVLLIYVVVDMTTNTVVGIQQYLVKPTEVDQNENMLS 104
Query: 57 DFCKELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTN--FSVVTWSDWDCQVMLES 113
D GI + V +GI L +A+ D ++ + + F +VT + L
Sbjct: 105 DQVTSDIGITEKMVKTSGIPLQDAIDKFDTYVKSLNIEPQTPMFRIVTDGQLPIRQCLHR 164
Query: 114 ECRIKKIQKPAYFNQWINLRVPFSKVF 140
E IK I+ P Y+N + +LR FSK +
Sbjct: 165 ESSIKDIELPEYYNVFHDLRKDFSKFY 191
>gi|282848807|ref|ZP_06258200.1| exonuclease [Veillonella parvula ATCC 17745]
gi|282581461|gb|EFB86851.1| exonuclease [Veillonella parvula ATCC 17745]
Length = 327
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EII+ +V ++ +II F +++P + P + +ELTGI H++++G+ A+ +
Sbjct: 31 EIIQIGAVKLNE-KMDIIDHFTMFIKPQYLPRMHKHVRELTGITTHELNHGVPFKTAMQY 89
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS 137
KW + +++W D ++ E+ + K++ +Y +QW++ ++ +S
Sbjct: 90 FQKWC------GDEYMLLSWGSDDILILREN-LMLHKMKALSY-DQWVDAQMIYS 136
>gi|336262797|ref|XP_003346181.1| hypothetical protein SMAC_06648 [Sordaria macrospora k-hell]
gi|380088781|emb|CCC13359.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 613
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 33/213 (15%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 12 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANNLEEIHRESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTGPNLDFVFVTLEAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHCG 165
K + P Y ++ +LR P S FG N+ A+E+ + +
Sbjct: 131 KAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSSLANICAALEVEAVQSSAPIKHN 190
Query: 166 L----------------DDAINIARLLSVIMRR 182
L ++A+ +AR+L ++R+
Sbjct: 191 LPFHLQALAPASPRRAMEEAVTLARVLRSLIRK 223
>gi|85100635|ref|XP_960999.1| hypothetical protein NCU06684 [Neurospora crassa OR74A]
gi|28922535|gb|EAA31763.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|28949923|emb|CAD70909.1| related to centractin (ARP1) [Neurospora crassa]
gi|336472438|gb|EGO60598.1| hypothetical protein NEUTE1DRAFT_57183 [Neurospora tetrasperma FGSC
2508]
gi|350294336|gb|EGZ75421.1| hypothetical protein NEUTE2DRAFT_105161 [Neurospora tetrasperma
FGSC 2509]
Length = 613
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 33/213 (15%)
Query: 2 EYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ YVVI TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 12 DRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDANNLEEIHRESVLVKPVNTPI-TPL 70
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRI 117
C LT + V N T +A+ D + + + N +F VT WD +V L E R
Sbjct: 71 CTSLTTLTWEHVRNAGTFRDAINRFDAFASEHLTGPNLDFVFVTLEAWDLRVQLPREARD 130
Query: 118 KKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGLIWQGRVHCG 165
K + P Y ++ +LR P S FG N+ A+E+ + +
Sbjct: 131 KAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSSLANICAALEVEAVQSSAPIKHN 190
Query: 166 L----------------DDAINIARLLSVIMRR 182
L ++A+ +AR+L ++R+
Sbjct: 191 LPFHLQALAPASPRRAMEEAVTLARVLRSLIRK 223
>gi|148685236|gb|EDL17183.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
gi|148685237|gb|EDL17184.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
gi|148685238|gb|EDL17185.1| exonuclease domain containing 1, isoform CRA_a [Mus musculus]
Length = 90
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 1 FEYYVVIDFEATC--DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPT 50
+ Y +V+DFE+TC D + + P EIIEFP+V+++ +GEI + F YV+P+
Sbjct: 34 YAYLIVVDFESTCWNDGKHHSSP-EIIEFPAVLLNTATGEIESEFHAYVQPS 84
>gi|449298206|gb|EMC94223.1| hypothetical protein BAUCODRAFT_26398 [Baudoinia compniacensis UAMH
10762]
Length = 787
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQ--TYVRPTFEPLL 55
F+ Y VI TCD+ E+IE VVV+ + V+P P+
Sbjct: 52 FDKYCVIHIATTCDEHGVYVTKDSAEVIEIGWVVVNARDPSLPELHHQSVLVKPINTPI- 110
Query: 56 TDFCKELTGIQQHQVDNGITLGEALYFHDKWL---LQMGLNNTN----FSVVTWSDWDCQ 108
T C LT + V N T +A+ D + L NTN F+ VT + WD +
Sbjct: 111 TPLCTSLTTLTWEHVRNAGTFRDAIMAFDTYAKEHLSPKDGNTNDPPPFAFVTLTPWDLR 170
Query: 109 VMLESECRIKKIQKPAYFNQWI 130
V L E R K + PAY +
Sbjct: 171 VQLPREARDKNVVLPAYLQHPV 192
>gi|452823782|gb|EME30790.1| RNA-binding protein [Galdieria sulphuraria]
Length = 739
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 1 FEYYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCK 60
+ Y +++D EAT L QEIIE+P V V ++ +T V P + +
Sbjct: 8 YRYLIILDLEATAVDLSKLSEQEIIEWPWAVYDIVQARVL---ETQVVVIKGPAYDNSNR 64
Query: 61 ELTGIQ-QHQVDNGITLGEALYFHDKWLLQ-MGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+ V L EA+ + D ++ + +F ++T WD + +L E K
Sbjct: 65 SVESYNGSKDVVIAQNLREAVLYFDNFIFEKFSTTGKSFCLLTDGPWDLRHLLLVEASRK 124
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGL-IWQGRVHCGLDDAINIARLLS 177
I+ ++ + +LRV F + F + L I + GL+D +IA +++
Sbjct: 125 NIKLAHHYRVFFDLRVEFRRCFPQGPIPRDRQIMTNFLDIPLVTANNGLEDCYSIAAIIT 184
Query: 178 VIMRRGFKFSITKSLT 193
++ +G+ FS+ + ++
Sbjct: 185 QMLLQGYVFSVPELIS 200
>gi|70985240|ref|XP_748126.1| RNA binding protein (Arp) [Aspergillus fumigatus Af293]
gi|66845754|gb|EAL86088.1| RNA binding protein (Arp), putative [Aspergillus fumigatus Af293]
gi|159125951|gb|EDP51067.1| RNA binding protein (Arp), putative [Aspergillus fumigatus A1163]
Length = 613
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 235
>gi|357058960|ref|ZP_09119806.1| hypothetical protein HMPREF9334_01523 [Selenomonas infelix ATCC
43532]
gi|355373306|gb|EHG20627.1| hypothetical protein HMPREF9334_01523 [Selenomonas infelix ATCC
43532]
Length = 219
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 4 YVVIDFEA--TCDKERNLHPQ---EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E + R + + EIIE +V ++ + E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVAKEHREIRRKLNGEIIEIGAVRLNE-NFEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q +V E+ + W + + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEKVAGRPAFSESFHSFVAW-----IGEAETKIYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
P + W+++R V + F D LK A+ G ++G H L DA+N
Sbjct: 115 ---LPDFDVNWLDVRWVDLQQAFDDRLGLHNSLALKHALGAMGRRFEGSQHSALADALNT 171
Query: 173 ARLLSVI 179
+ +L+++
Sbjct: 172 SAVLTLM 178
>gi|119499117|ref|XP_001266316.1| RNA binding protein (Arp), putative [Neosartorya fischeri NRRL 181]
gi|119414480|gb|EAW24419.1| RNA binding protein (Arp), putative [Neosartorya fischeri NRRL 181]
Length = 613
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 235
>gi|121719217|ref|XP_001276323.1| RNA binding protein (Arp), putative [Aspergillus clavatus NRRL 1]
gi|119404521|gb|EAW14897.1| RNA binding protein (Arp), putative [Aspergillus clavatus NRRL 1]
Length = 613
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++AI +AR+L ++R KS P +P LT
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLRGLIR--------KSQPPHEHPEILT 235
>gi|258571315|ref|XP_002544461.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904731|gb|EEP79132.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 610
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 12 LDRYIVIHVSTTCDEHGVYVTKDSAEVIELGWILLDTKSCEELHRESVLVKPVNTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRSAGTFRDAVNRFDAFAQEHLLSKNLEFAFVTLDSWDMRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQR 154
>gi|422343383|ref|ZP_16424311.1| hypothetical protein HMPREF9432_00371 [Selenomonas noxia F0398]
gi|355378690|gb|EHG25870.1| hypothetical protein HMPREF9432_00371 [Selenomonas noxia F0398]
Length = 219
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 4 YVVIDFEAT-CDKE----RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E KE R EIIE +V ++ + E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVSKEYREVRRKLNGEIIEIGAVRLNE-NYEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q +V+ ++ + W+ G T + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEKVEGHPAFSDSFHSFVAWI---GAAETK--IYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
P + W++ R V + F D LK A+ G ++G H L DA+N
Sbjct: 115 ---LPDFDVNWLDTRWVDLQQAFDDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNT 171
Query: 173 ARLLSVIMRRGFKFSIT 189
+ +L+ +M+ KF T
Sbjct: 172 SAVLA-LMQDDAKFRET 187
>gi|119182868|ref|XP_001242536.1| hypothetical protein CIMG_06432 [Coccidioides immitis RS]
gi|303319481|ref|XP_003069740.1| Zn-finger in Ran binding protein and others domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|240109426|gb|EER27595.1| Zn-finger in Ran binding protein and others domain containing
protein [Coccidioides posadasii C735 delta SOWgp]
gi|320040805|gb|EFW22738.1| RNA binding protein [Coccidioides posadasii str. Silveira]
gi|392865438|gb|EAS31227.2| RNA binding protein [Coccidioides immitis RS]
Length = 618
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ S E + V+P P+ T
Sbjct: 12 LDRYIVIHVSTTCDEHGVYVTKDSAEVIELGWILLDTKSCEELHRESVLVKPINTPI-TP 70
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 71 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLLSKNLEFAFVTLDSWDMRVQLPREAR 130
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 131 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSDLSNICAALEVEPVQSSAPIKH 190
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++ I +AR+L ++R KS P +P LT
Sbjct: 191 NLPFHLQALAPASPRRAMEEVITLARVLRGLIR--------KSQPPHEHPEILT 236
>gi|149280749|ref|ZP_01886857.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
gi|149228496|gb|EDM33907.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
Length = 181
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQE--IIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ +++D EATC + N E IIE +++ +GEI V+P + +F
Sbjct: 5 LDEILIVDIEATCWEGSNPDGMENDIIEIGIALLNVQTGEISENRGILVKPERSEV-GEF 63
Query: 59 CKELTGIQ-QHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C +LT I Q +D+G+T EA +L+ ++ N + ++ +D + + +C
Sbjct: 64 CTKLTTITPQMIIDDGVTFREACS-----ILKKEYSSQNRAWASFGAYDLK-QFQRQCAA 117
Query: 118 KKIQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
I P + +N++ F+ K + A+E+ + +G H G+DDA NIA++L
Sbjct: 118 YNIGYP-FGPSHVNVKTLFALKKRLSQEQGMSGALEMLNIPLEGTHHRGVDDAKNIAKIL 176
Query: 177 SVIM 180
I+
Sbjct: 177 RWIL 180
>gi|357008441|ref|ZP_09073440.1| hypothetical protein PelgB_03095 [Paenibacillus elgii B69]
Length = 187
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 5 VVIDFEATCDKERNLHPQEIIEFPSVVVS------GVSGEIIACFQTYVRPTFEPLLTDF 58
V+ D E T + P EI+E + V+ G +G CFQ Y P +
Sbjct: 4 VIFDVETTYVTVKGDIP-EIVEIGACKVNLNPYDPGEAG--TDCFQCYTFPEIKGRFGKK 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
+ G+++ + + E +D+++ +G F +W D +++LE CR
Sbjct: 61 TLKFIGLKEEDLGKVVPFREG---YDRFMEWIGSELVYFC--SWGVDDRKILLE-HCRRF 114
Query: 119 KIQKPAYFNQWINLRVPFSKVFGDVRCN---LKEAVELAGLIWQGRVHCGLDDAINIARL 175
+ + ++ N + +++ P S++ V+ N LK+A+ELAG+ +GR H L DAIN +L
Sbjct: 115 DLSQ-SWLNHYHDIQRPISQLL--VKRNQMKLKDAIELAGIEKEGRFHSALVDAINTTKL 171
Query: 176 L 176
Sbjct: 172 F 172
>gi|229197646|ref|ZP_04324367.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus m1293]
gi|228585835|gb|EEK43932.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus m1293]
Length = 273
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + +II F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ N + + ++++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHAVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|229140142|ref|ZP_04268700.1| exonuclease [Bacillus cereus BDRD-ST26]
gi|228643228|gb|EEK99501.1| exonuclease [Bacillus cereus BDRD-ST26]
Length = 208
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + +II F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKIIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ N + + ++++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYR-FLSHDCTLHGVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|115437370|ref|XP_001217793.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188608|gb|EAU30308.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 610
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 41/234 (17%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 10 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 68
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + ++ N F+ VT WD +V L E R
Sbjct: 69 LCTSLTTLTWEHVRSAGTFRDAINRFDAFAQEHLISKNLEFAFVTLDSWDLRVQLPREAR 128
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 129 DKAVVLPPYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQTSAPIKH 188
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLT 202
+ +++A+ +AR+L ++R KS P +P LT
Sbjct: 189 NLPFHLQALAPASPRRAMEEAVTLARVLRGLIR--------KSQPPHEHPEILT 234
>gi|124005323|ref|ZP_01690164.1| exonuclease [Microscilla marina ATCC 23134]
gi|123989145|gb|EAY28723.1| exonuclease [Microscilla marina ATCC 23134]
Length = 180
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 1 FEYYVVIDFEATCDKERNLHPQ--EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ +VID E+TC + Q EIIE V + + V+PT + ++ F
Sbjct: 5 LDKILVIDVESTCWQGPPPEGQVSEIIEIGICVFDLKERQRESREGILVKPT-QSEVSPF 63
Query: 59 CKELTGIQQHQVD-NGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRI 117
C ELT I +D G+ L EA +L+ + +W D+D + E C+
Sbjct: 64 CTELTTITPELIDAEGVDLKEACR-----ILRKKYESQQRVWGSWGDYD-RRQFERNCKN 117
Query: 118 KKIQKPAYFNQWINLRVPFS-KVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I P N +N++ F+ K + + A+EL +G H G+DDA NIARL+
Sbjct: 118 RGIGYPFGTNH-LNVKTLFAIKNCLERELGMDGAMELMQWELEGTHHRGVDDAWNIARLM 176
Query: 177 SVIM 180
S ++
Sbjct: 177 STLI 180
>gi|423396139|ref|ZP_17373340.1| hypothetical protein ICU_01833 [Bacillus cereus BAG2X1-1]
gi|423407019|ref|ZP_17384168.1| hypothetical protein ICY_01704 [Bacillus cereus BAG2X1-3]
gi|401652622|gb|EJS70177.1| hypothetical protein ICU_01833 [Bacillus cereus BAG2X1-1]
gi|401659594|gb|EJS77078.1| hypothetical protein ICY_01704 [Bacillus cereus BAG2X1-3]
Length = 281
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + +II F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIDTSTMKIIGEFSELVKPS--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ V+W D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSI---FVSWGTEDYR-FLSHDCTLYGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A++L
Sbjct: 117 PCMEKESRFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTAKIL 174
>gi|294499220|ref|YP_003562920.1| exonuclease family protein [Bacillus megaterium QM B1551]
gi|294349157|gb|ADE69486.1| exonuclease family protein [Bacillus megaterium QM B1551]
Length = 311
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 4 YVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
++ DFE C +K E I +V + + E I F Y++PT L+ FCKEL
Sbjct: 7 FIFFDFEMLCSNKGMPFEDMEAIRLGAVKYN-IETEDIEFFDRYIQPTKRVSLSRFCKEL 65
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECR------ 116
TGI+ + F D G+ + F +WS D + +
Sbjct: 66 TGIKDTDLVGASNFKNV--FEDFLTWIGGIKKSRF--FSWSTSDLSRLKIDAAKHEISLA 121
Query: 117 -IKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
IKKI++ ++++ + F+K + +++ + L L ++G+ H + DA N R+
Sbjct: 122 TIKKIEQ-----RYVDFQEIFTKRVSENNVSVENGLALYNLQFEGKKHNPMYDAYNTLRI 176
>gi|229174198|ref|ZP_04301733.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus MM3]
gi|228609319|gb|EEK66606.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus MM3]
Length = 281
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPS--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + ++ I + + +K++ +G ++ V+W D + L +C + ++
Sbjct: 64 TGITK---EDLIGVEKFPQIIEKFIQFIGEDSV---FVSWGREDYR-FLSHDCTLHGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|42782602|ref|NP_979849.1| exonuclease [Bacillus cereus ATCC 10987]
gi|42738528|gb|AAS42457.1| exonuclease family protein [Bacillus cereus ATCC 10987]
Length = 281
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSDDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + N + + ++++ +G ++ VTW D + ++ +C + +
Sbjct: 64 TGITKKDLMNVEKFPQII---ERFIQFIGEDSI---FVTWGKEDYRFLV-HDCTLHGVDC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|292669904|ref|ZP_06603330.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648701|gb|EFF66673.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 4 YVVIDFEAT-CDKE----RNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
++V+D E KE R EIIE +V ++ + E FQ YV P + ++
Sbjct: 3 HIVVDLEMNPVSKEYREVRRKLNGEIIEIGAVRLNE-NYEQEDEFQCYVCPEY-GMVKKH 60
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIK 118
ELTGI Q +V+ ++ + W+ G T + +WS D + L ECR+K
Sbjct: 61 ITELTGITQEKVEGHPAFSDSFHSFVAWI---GAAETK--IYSWSMSDIK-QLRKECRLK 114
Query: 119 KIQKPAYFNQWINLR-VPFSKVFGDV-----RCNLKEAVELAGLIWQGRVHCGLDDAINI 172
P + W++ R V + F D LK A+ G ++G H L DA+N
Sbjct: 115 ---LPDFDVNWLDTRWVDLQQEFDDRLGLHNSLALKHALGAMGRRFEGSQHSALADAVNT 171
Query: 173 ARLLSVIMRRGFKFSIT 189
+ +L+ +M+ KF T
Sbjct: 172 SAVLA-LMQDDAKFRET 187
>gi|430749731|ref|YP_007212639.1| exonuclease [Thermobacillus composti KWC4]
gi|430733696|gb|AGA57641.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Thermobacillus composti KWC4]
Length = 248
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+YV++D E K + P E+IE +V + + F ++P + L F +E
Sbjct: 2 HYVILDIEFNGRKFASDLPMEVIEIGAVRLDDKLQQT-GTFTALIKPVYFAKLNKFIREK 60
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI Q ++D + + +WL G ++ F +VTW D + ++ + R+ ++
Sbjct: 61 TGITQEEIDRAGRFPDVIASFIRWL---GPPDS-FLLVTWGGEDLKRIV-LDTRMHRLDD 115
Query: 123 PAYFN-QWINLRVPFSKVFGDVRCN--LKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ ++ +L F +V D++ + ++ A+E+ GL H L DA+ A + +
Sbjct: 116 SFWLAVRYYDLLKGFLRVH-DLKSDVSVERALEMLGLPAGEHAHRALGDAVMTAGIFRTL 174
Query: 180 MRR 182
R
Sbjct: 175 HDR 177
>gi|261202824|ref|XP_002628626.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590723|gb|EEQ73304.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239612439|gb|EEQ89426.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327355244|gb|EGE84101.1| asparagine-rich protein [Ajellomyces dermatitidis ATCC 18188]
Length = 619
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ YVVI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYVVIHVATTCDEHGVYVTKDSAEVIELGWILLDSENCKELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINQFDAFAQEHLLSKNLEFSFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + P Y ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQRWQQHHPESLPFGPSDLANICAALEVEPMQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRR 182
+ +++AI +AR+L ++R+
Sbjct: 190 NLPFHLQALAPASPRRAMEEAITLARVLHGLIRK 223
>gi|374296263|ref|YP_005046454.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium clariflavum DSM 19732]
gi|359825757|gb|AEV68530.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Clostridium clariflavum DSM 19732]
Length = 211
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y++ D E ++ P EIIE +V + E FQ +++P + L K T
Sbjct: 3 YIIYDLELNSKPFKSSLPNEIIEIGAVKLDSNLNEF-DTFQAFIKPKYFKKLFPVVKRKT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q +++ E + W+ N+ +V+W D ++ + C+I K+
Sbjct: 62 KITQEDINSAENFKEVITNFRNWI------GDNYILVSWGHDDIHHLV-TGCKINKLA-S 113
Query: 124 AYFNQWINLRVPFSKVFG---DVRCNLKEAVELAGLIWQGRVHCGLDDA 169
+ + I+L+ S ++ R +L+ A+ + G+ + +H L DA
Sbjct: 114 NWLKKNIDLQKQVSSIYNVPPGQRYSLENALNILGIEAEENLHRALADA 162
>gi|50556632|ref|XP_505724.1| YALI0F21835p [Yarrowia lipolytica]
gi|49651594|emb|CAG78535.1| YALI0F21835p [Yarrowia lipolytica CLIB122]
Length = 482
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQ-TYVRPTFEPLLTDFCKEL 62
Y+V+ TCD++ ++ E V + VS + I+ Q T VRP P +T C +L
Sbjct: 3 YLVVHVLTTCDEQGVYVTRDSTEIIEVAWTTVSPDSISPIQSTLVRPVNTP-ITPLCTQL 61
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
T I +G+ L +A+ G + V WD +V LE E R K ++
Sbjct: 62 TSITWETASSGVLLQQAI----AQFAASGAADEGTVYVCLDSWDLRVQLERESRDKGVKL 117
Query: 123 P 123
P
Sbjct: 118 P 118
>gi|423477656|ref|ZP_17454371.1| hypothetical protein IEO_03114 [Bacillus cereus BAG6X1-1]
gi|402429291|gb|EJV61377.1| hypothetical protein IEO_03114 [Bacillus cereus BAG6X1-1]
Length = 281
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPS--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ V+W D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSV---FVSWGREDYR-FLSHDCTLYGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALSDAENTANIL 174
>gi|423458387|ref|ZP_17435184.1| hypothetical protein IEI_01527 [Bacillus cereus BAG5X2-1]
gi|401146808|gb|EJQ54318.1| hypothetical protein IEI_01527 [Bacillus cereus BAG5X2-1]
Length = 281
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPS--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ V+W D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSV---FVSWGREDYR-FLSHDCTLHGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|68476633|ref|XP_717609.1| hypothetical protein CaO19.5071 [Candida albicans SC5314]
gi|68476780|ref|XP_717535.1| hypothetical protein CaO19.12537 [Candida albicans SC5314]
gi|46439249|gb|EAK98569.1| hypothetical protein CaO19.12537 [Candida albicans SC5314]
gi|46439326|gb|EAK98645.1| hypothetical protein CaO19.5071 [Candida albicans SC5314]
gi|238878773|gb|EEQ42411.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 763
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 2 EYYVVIDFEATCDKERNL---HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y++I TCD E+IEF V V+ E + VRPT P +T +
Sbjct: 3 DIYIIIHISTTCDDSPTFVTKDSSELIEFAWETVDSVTLETLYKGSNLVRPTNTP-ITPY 61
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-FSVVTWSDWDCQVMLESECRI 117
C ++ I V N + +A+ D+++ + ++ FS+V + +V L E R
Sbjct: 62 CSKIHRITWDNVKNAGSFKDAITNFDQYVQEHIISKKKEFSIVMFDISKLRVQLVREARD 121
Query: 118 KKIQKPAYF 126
K + P+Y
Sbjct: 122 KSVVLPSYL 130
>gi|296817553|ref|XP_002849113.1| asparagine-rich protein [Arthroderma otae CBS 113480]
gi|238839566|gb|EEQ29228.1| asparagine-rich protein [Arthroderma otae CBS 113480]
Length = 637
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y++I TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 LDRYIIIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCEEIHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|452964265|gb|EME69309.1| inhibitor of the KinA pathway to sporulation [Magnetospirillum sp.
SO-1]
Length = 208
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 22 QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVD-NGITLGEAL 80
+E+++ +V + ++ E + VRP F P+L+D+ K+LTGI+Q +VD G+ L EAL
Sbjct: 50 RELVQVGAVKLDALTLEETDRLELMVRPRFNPVLSDYFKDLTGIKQSRVDREGLDLPEAL 109
>gi|125973027|ref|YP_001036937.1| exonuclease, RNase T and DNA polymerase III [Clostridium
thermocellum ATCC 27405]
gi|256004824|ref|ZP_05429799.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 2360]
gi|281417237|ref|ZP_06248257.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum JW20]
gi|385779058|ref|YP_005688223.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 1313]
gi|419721731|ref|ZP_14248888.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum AD2]
gi|419725177|ref|ZP_14252229.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum YS]
gi|125713252|gb|ABN51744.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum ATCC 27405]
gi|255991274|gb|EEU01381.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 2360]
gi|281408639|gb|EFB38897.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum JW20]
gi|316940738|gb|ADU74772.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum DSM 1313]
gi|380771364|gb|EIC05232.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum YS]
gi|380782308|gb|EIC11949.1| Exonuclease RNase T and DNA polymerase III [Clostridium
thermocellum AD2]
Length = 215
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y+V D E ++ P EIIE ++ ++ EI F ++++P + L K+ T
Sbjct: 3 YIVYDLELNSKPFKSSIPNEIIEIGAIKLNENLQEI-GMFSSFIKPKYFKKLFSVVKQKT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
I Q Q+++ + + +W+ ++ +++W D + L C+ +I K
Sbjct: 62 KITQEQINSADSFRNVIKQFIRWI------GDDYLLISWGHDDV-LNLILNCKFNRI-KI 113
Query: 124 AYFNQWINLRVPFSKVF---GDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVIM 180
+ + I+++ FS ++ R +L+ A+ L G+ +H L DA A++ I
Sbjct: 114 DWLKRNIDIQKQFSAIYHLPSGQRYSLENALALIGVEIDENLHRALTDAQYTAKIFKSIF 173
Query: 181 RR 182
+
Sbjct: 174 DK 175
>gi|315048959|ref|XP_003173854.1| hypothetical protein MGYG_04027 [Arthroderma gypseum CBS 118893]
gi|311341821|gb|EFR01024.1| hypothetical protein MGYG_04027 [Arthroderma gypseum CBS 118893]
Length = 637
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y++I TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 LDRYIIIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCEEIHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|228947153|ref|ZP_04109447.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228812400|gb|EEM58727.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 273
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + ++I F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ I + + +K++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHGALADAENTANIL 166
>gi|423378703|ref|ZP_17355987.1| hypothetical protein IC9_02056 [Bacillus cereus BAG1O-2]
gi|423546793|ref|ZP_17523151.1| hypothetical protein IGO_03228 [Bacillus cereus HuB5-5]
gi|423623416|ref|ZP_17599194.1| hypothetical protein IK3_02014 [Bacillus cereus VD148]
gi|401180297|gb|EJQ87459.1| hypothetical protein IGO_03228 [Bacillus cereus HuB5-5]
gi|401258585|gb|EJR64770.1| hypothetical protein IK3_02014 [Bacillus cereus VD148]
gi|401634350|gb|EJS52117.1| hypothetical protein IC9_02056 [Bacillus cereus BAG1O-2]
Length = 281
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ ++W D L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSV---FISWGKEDYH-FLSHDCTLHGLEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKDSRFDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANILL 175
Query: 178 VI 179
I
Sbjct: 176 KI 177
>gi|423441757|ref|ZP_17418663.1| hypothetical protein IEA_02087 [Bacillus cereus BAG4X2-1]
gi|423448019|ref|ZP_17424898.1| hypothetical protein IEC_02627 [Bacillus cereus BAG5O-1]
gi|423464830|ref|ZP_17441598.1| hypothetical protein IEK_02017 [Bacillus cereus BAG6O-1]
gi|423534172|ref|ZP_17510590.1| hypothetical protein IGI_02004 [Bacillus cereus HuB2-9]
gi|423540561|ref|ZP_17516952.1| hypothetical protein IGK_02653 [Bacillus cereus HuB4-10]
gi|401130430|gb|EJQ38099.1| hypothetical protein IEC_02627 [Bacillus cereus BAG5O-1]
gi|401174096|gb|EJQ81308.1| hypothetical protein IGK_02653 [Bacillus cereus HuB4-10]
gi|402416589|gb|EJV48905.1| hypothetical protein IEA_02087 [Bacillus cereus BAG4X2-1]
gi|402419267|gb|EJV51547.1| hypothetical protein IEK_02017 [Bacillus cereus BAG6O-1]
gi|402463142|gb|EJV94844.1| hypothetical protein IGI_02004 [Bacillus cereus HuB2-9]
Length = 281
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ ++W D L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSV---FISWGKEDYH-FLSHDCTLHGLEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKDSRFDLQKFVFQAYEELFEHT-PSLQSAVEQLGLTWEGKQHRALADAENTANILL 175
Query: 178 VI 179
I
Sbjct: 176 KI 177
>gi|67902136|ref|XP_681324.1| hypothetical protein AN8055.2 [Aspergillus nidulans FGSC A4]
gi|40740487|gb|EAA59677.1| hypothetical protein AN8055.2 [Aspergillus nidulans FGSC A4]
gi|259480812|tpe|CBF73795.1| TPA: RNA binding protein (Arp), putative (AFU_orthologue;
AFUA_5G02160) [Aspergillus nidulans FGSC A4]
Length = 609
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 33/214 (15%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+V+ TCD+ E+IE +++ + E + V+P P+ T
Sbjct: 11 LDRYIVVHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNT-NFSVVTWSDWDCQVMLESECR 116
C LT + V + + +A+ D + + L+ F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGSFRDAINRFDAFAQEHLLDRKLEFAFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRV---------PFSKVFGDVR-CNLKEAVELAGL-------- 156
K + PAY ++ +LR P S FG N+ A+E+ +
Sbjct: 130 DKAVVLPAYLQHSRTFDLRTEYQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKH 189
Query: 157 --------IWQGRVHCGLDDAINIARLLSVIMRR 182
+ +D+A+ +AR+L ++R+
Sbjct: 190 NLPFHLQALAPASPRRAMDEAVTLARVLRGLIRK 223
>gi|229092500|ref|ZP_04223657.1| exonuclease [Bacillus cereus Rock3-42]
gi|228690905|gb|EEL44679.1| exonuclease [Bacillus cereus Rock3-42]
Length = 205
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + ++I F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ I + + +K++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|423483165|ref|ZP_17459855.1| hypothetical protein IEQ_02943 [Bacillus cereus BAG6X1-2]
gi|401141938|gb|EJQ49488.1| hypothetical protein IEQ_02943 [Bacillus cereus BAG6X1-2]
Length = 284
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIDVSTMKVIGEFSELVKPS--APLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G N+ ++W D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGENSI---FISWGKEDYR-FLSQDCTLHGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+GR H L DA N A +
Sbjct: 117 PCMEKESRFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGRQHRALADAENTANIF 174
>gi|326475517|gb|EGD99526.1| RNA binding protein [Trichophyton tonsurans CBS 112818]
Length = 701
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y++I TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 81 LDRYIIIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCEEIHRESVLVKPVNTPI-TP 139
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 140 LCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQLPREAR 199
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 200 DKAVVLPPYLQHSRTFDLRTEYQR 223
>gi|326483116|gb|EGE07126.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 637
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y++I TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 LDRYIIIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCEEIHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|327301221|ref|XP_003235303.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462655|gb|EGD88108.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 637
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y++I TCD+ E+IE +++ + E I V+P P+ T
Sbjct: 11 LDRYIIIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCEEIHRESVLVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V + T +A+ D + + L+ N F+ VT WD +V L E R
Sbjct: 70 LCTSLTTLTWEHVRSAGTFRDAINRFDTFAQENLLSKNLEFAFVTLDSWDMRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|228916151|ref|ZP_04079721.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228934812|ref|ZP_04097643.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229123054|ref|ZP_04252261.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
95/8201]
gi|228660348|gb|EEL15981.1| Exonuclease RNase T and DNA polymerase III [Bacillus cereus
95/8201]
gi|228824712|gb|EEM70513.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228843349|gb|EEM88427.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 273
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + ++I F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ I + + +K++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|270000543|ref|NP_845863.2| exonuclease [Bacillus anthracis str. Ames]
gi|386737289|ref|YP_006210470.1| Exonuclease family protein [Bacillus anthracis str. H9401]
gi|269850303|gb|AAP27349.2| exonuclease family protein [Bacillus anthracis str. Ames]
gi|384387141|gb|AFH84802.1| Exonuclease family protein [Bacillus anthracis str. H9401]
Length = 273
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + ++I F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ I + + +K++ +G ++ VTW D + L +C + ++ P
Sbjct: 61 KDL---IGVEKFPQIIEKFIRFIGEDSI---FVTWGKEDYR-FLSHDCTLHSVECPCMEK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GLIW+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANIL 166
>gi|338730010|ref|YP_004659402.1| DNA polymerase III catalytic subunit, PolC type [Thermotoga
thermarum DSM 5069]
gi|335364361|gb|AEH50306.1| DNA polymerase III catalytic subunit, PolC type [Thermotoga
thermarum DSM 5069]
Length = 1374
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 4 YVVIDFEATCDKERNLHP--QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKE 61
YVV+D E T LHP EIIE +V + G+I F T V+P + L+DF
Sbjct: 365 YVVVDLETT-----GLHPMFSEIIEIGAVKIE--EGQITDEFHTLVKP--KEKLSDFTSY 415
Query: 62 LTGIQQHQVDNGITLGEAL 80
LTGI+Q ++N T+ E L
Sbjct: 416 LTGIKQEDLENMPTIEEVL 434
>gi|423401706|ref|ZP_17378879.1| hypothetical protein ICW_02104 [Bacillus cereus BAG2X1-2]
gi|401653084|gb|EJS70635.1| hypothetical protein ICW_02104 [Bacillus cereus BAG2X1-2]
Length = 281
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P+ LT +L
Sbjct: 6 HFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPS--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQ- 121
TGI + + I + + +K++ +G ++ V+W D + L +C + ++
Sbjct: 64 TGITKKDL---IGVEKFPQIIEKFIQFIGEDSV---FVSWGREDYR-FLSHDCTLYGVEC 116
Query: 122 ----KPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
K + F+ + + ++F +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKESKFDLQKFVFQAYEELFEHT-PSLQFAVEQLGLTWEGKQHRALADAENTANIL 174
>gi|241949359|ref|XP_002417402.1| RNA-binding protein, putative [Candida dubliniensis CD36]
gi|223640740|emb|CAX45053.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 767
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 2 EYYVVIDFEATCDKERNL---HPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDF 58
+ Y++I TCD E+IEF V V+ + + VRPT P +T +
Sbjct: 3 DIYIIIHISTTCDDSPTFVTKDSSELIEFAWETVDSVTLDTVYKGSNLVRPTNTP-ITPY 61
Query: 59 CKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTN-FSVVTWSDWDCQVMLESECRI 117
C ++ I V N + +A+ D+++ + ++ FS+V + +V L E R
Sbjct: 62 CSKIHRISWDNVKNAGSFKDAITKFDQYVQEYIISQKKEFSIVMFDISKLRVQLVREARD 121
Query: 118 KKIQKPAYF 126
K + P+Y
Sbjct: 122 KSVVLPSYL 130
>gi|381179603|ref|ZP_09888452.1| Exonuclease RNase T and DNA polymerase III [Treponema
saccharophilum DSM 2985]
gi|380768427|gb|EIC02417.1| Exonuclease RNase T and DNA polymerase III [Treponema
saccharophilum DSM 2985]
Length = 339
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 3 YYVVIDFEATCDKERNLHPQ-----EIIEFPSVVVSGV----SGEIIACFQTYVRPTFEP 53
YYV ID E + + Q E+I+ +V++ G+ F +VRP
Sbjct: 2 YYVCIDLEMGEVEHGGVSAQFPLSHEVIQIGAVILDDQFHFNGGD--DSFSMFVRPAHSS 59
Query: 54 LLTDFCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLES 113
+ T ELTGI + + A + +W+ + F+ WS D V L
Sbjct: 60 I-TPAIFELTGISDDMLAGACSFETAFGRYCEWV-RARTGGGKFTTFCWSARDY-VQLRD 116
Query: 114 ECRIKKIQKP---AYFNQWINLRVPFSKVFGD-VRCNLKEAVELAGLIWQGRVHCGLDDA 169
E K + + +++L+ FS + G +L++AVE ++GR H + DA
Sbjct: 117 EISAKAGHRSDLSGNLDTFVDLQRSFSDILGTRTAVSLEKAVEFCHEKFEGRAHSAVVDA 176
Query: 170 INIARLLSVIMR 181
N A +L+ I R
Sbjct: 177 FNTAVVLNKIAR 188
>gi|125534583|gb|EAY81131.1| hypothetical protein OsI_36315 [Oryza sativa Indica Group]
Length = 219
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 153 LAGLIWQGRVHCGLDDAINIARLLSVIMRRGFKFSITKSLTPQANPNCLTWNRHHFLEPQ 212
+A L + GR H GL + AR+ +V++RRG T P P
Sbjct: 1 MAWLPFDGRPHIGLV-VYDDARITAVLVRRG---GFTAGSLPLPLPAAQAAAAEEEGVVV 56
Query: 213 AMYTPPHTSLIHEFEDCRYCYCGAKSIKKVIQRPGPKRGSFFFGCGN 259
+ + RYC+CG +S +K ++RPGP +G FFGCG+
Sbjct: 57 GGGGGGGGARV------RYCHCGVESREKEVRRPGPTQGRHFFGCGS 97
>gi|228986624|ref|ZP_04146755.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228773109|gb|EEM21544.1| Exonuclease RNase T and DNA polymerase III [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 273
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 14 DKERNLHP------QEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQ 67
D ERN P EI++ +V + + ++I F V+P LT +LTGI +
Sbjct: 3 DIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKLTGITK 60
Query: 68 HQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFN 127
+ I + + +K++ +G N+ VTW D + L +C + ++ P
Sbjct: 61 KDL---IGVEKFPQIIEKFVQFIGENSI---FVTWGKEDYR-FLSHDCTLHSVECPRMDK 113
Query: 128 QW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
+ I+L+ + + ++ +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 114 ERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLTWEGKQHRALADAENTANIL 166
>gi|251794793|ref|YP_003009524.1| exonuclease RNase T and DNA polymerase III [Paenibacillus sp.
JDR-2]
gi|247542419|gb|ACS99437.1| Exonuclease RNase T and DNA polymerase III [Paenibacillus sp.
JDR-2]
Length = 264
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 4 YVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELT 63
Y+++D E K + P E+IE +V ++ + F + ++P + L F K+ T
Sbjct: 3 YIILDIEFNGRKFASDLPMEVIEIGAVRLNA-DLQQTDIFSSLIKPVYFSKLNSFIKKKT 61
Query: 64 GIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKP 123
GI Q ++D + WL + F + TW D + ++ + R+ K+
Sbjct: 62 GIPQEEIDIAPKFPRVIGEFINWLDR----GEPFMLFTWGGEDLKRIV-YDTRMHKLDDA 116
Query: 124 AYFN----QWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLSVI 179
+ + + + + + DV +++ A+ L+++G H LDDAI A + I
Sbjct: 117 FWLSMDTFDLLKGYLRYKNITNDV--SVEAALADLNLVFEGNAHRALDDAIMTADVFRAI 174
>gi|150390277|ref|YP_001320326.1| exonuclease [Alkaliphilus metalliredigens QYMF]
gi|149950139|gb|ABR48667.1| Exonuclease, RNase T and DNA polymerase III [Alkaliphilus
metalliredigens QYMF]
Length = 192
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 69/171 (40%), Gaps = 29/171 (16%)
Query: 19 LHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGE 78
L PQEIIE +V + EI FQ +VRP L K+ T I + G +L
Sbjct: 31 LCPQEIIEIGAVKTND-EFEIEETFQMFVRPVLYTKLHPKVKKKTQITNEDLLGGKSLNS 89
Query: 79 ALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWIN------- 131
++ W+ N F + +W D L+ C +IQ WI+
Sbjct: 90 SITALQHWI-----NEDEFIMCSWGKDDIN-ELKRNCSFFEIQ-----TNWIDKYCDIQK 138
Query: 132 -----LRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARLLS 177
L +P K G LK+AVE + R H L+D+I A++L
Sbjct: 139 MCMNYLDLPKGKQIG-----LKKAVETFNIEIDSRFHKALNDSIYTAKILK 184
>gi|295704562|ref|YP_003597637.1| exonuclease family protein [Bacillus megaterium DSM 319]
gi|294802221|gb|ADF39287.1| exonuclease family protein [Bacillus megaterium DSM 319]
Length = 311
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 18/180 (10%)
Query: 4 YVVIDFEATC-DKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
++ DFE C +K E I +V + + E I F Y++PT L+ FC EL
Sbjct: 7 FIFFDFEMLCSNKGMPFEDMEAIRLGAVKYN-IETENIEFFDRYIQPTKSVSLSRFCTEL 65
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWD-CQVMLESE------C 115
TGI+ + F D G+ + F +WS D + +++E
Sbjct: 66 TGIKDTDLVGASNFKNV--FEDFLTWIGGIKKSRF--FSWSTSDLSRFKIDAEKHEISLA 121
Query: 116 RIKKIQKPAYFNQWINLRVPFSKVFGDVRCNLKEAVELAGLIWQGRVHCGLDDAINIARL 175
IKKI++ ++++ + F+K +++ + L L ++G+ H + DA N R+
Sbjct: 122 TIKKIEQ-----RYVDFQAIFTKRVSKNNVSVENGLALYNLQFEGKKHNPMYDAYNTLRI 176
>gi|212534952|ref|XP_002147632.1| RNA binding protein (Arp), putative [Talaromyces marneffei ATCC
18224]
gi|210070031|gb|EEA24121.1| RNA binding protein (Arp), putative [Talaromyces marneffei ATCC
18224]
Length = 604
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCDELHRESILVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V N + +A+ D + + ++ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWENVRNAGSFRDAVNRFDAFAQEHLISKNLEFSFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|294791718|ref|ZP_06756866.1| putative exonuclease family protein [Veillonella sp. 6_1_27]
gi|294456948|gb|EFG25310.1| putative exonuclease family protein [Veillonella sp. 6_1_27]
Length = 327
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 23 EIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKELTGIQQHQVDNGITLGEALYF 82
EII+ +V ++ +II F +++P + + +ELTGI H++++G+ A+ +
Sbjct: 31 EIIQIGAVKLNE-KMDIIDHFTMFIKPQYLTRMHKHVRELTGITTHELNHGVPFKTAMQY 89
Query: 83 HDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQKPAYFNQWINLRVPFS-KVFG 141
KW + +++W D ++ E+ + K++ +Y +QW++ ++ +S + +G
Sbjct: 90 FQKWC------GDEYMLLSWGSDDILILREN-LMLHKMKALSY-DQWVDAQMIYSYQRYG 141
Query: 142 -DVRCNLKEAVELAGLIWQG-RVHCGLDDAINIARL 175
+ + ++ A+E + + H L DA+ A +
Sbjct: 142 TNQQYSVAHAMENLNISTEHLSAHNALHDAVFTAHI 177
>gi|242791658|ref|XP_002481802.1| RNA binding protein (Arp), putative [Talaromyces stipitatus ATCC
10500]
gi|218718390|gb|EED17810.1| RNA binding protein (Arp), putative [Talaromyces stipitatus ATCC
10500]
Length = 612
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1 FEYYVVIDFEATCDKER---NLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTD 57
+ Y+VI TCD+ E+IE +++ + + + V+P P+ T
Sbjct: 11 LDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKNCDELHRESILVKPVNTPI-TP 69
Query: 58 FCKELTGIQQHQVDNGITLGEALYFHDKWLLQMGLN-NTNFSVVTWSDWDCQVMLESECR 116
C LT + V N + +A+ D + + ++ N FS VT WD +V L E R
Sbjct: 70 LCTSLTTLTWENVRNAGSFRDAVNRFDAFAQEHLISKNLEFSFVTLDSWDLRVQLPREAR 129
Query: 117 IKKIQKPAYF--NQWINLRVPFSK 138
K + P Y ++ +LR + +
Sbjct: 130 DKAVVLPPYLQHSRTFDLRTEYQR 153
>gi|402556343|ref|YP_006597614.1| exonuclease [Bacillus cereus FRI-35]
gi|401797553|gb|AFQ11412.1| exonuclease [Bacillus cereus FRI-35]
Length = 281
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 3 YYVVIDFEATCDKERNLHPQEIIEFPSVVVSGVSGEIIACFQTYVRPTFEPLLTDFCKEL 62
+++V D E ++ P EI++ +V + + ++I F V+P LT +L
Sbjct: 6 HFIVFDIERNFRPYKSDDPSEIVDIGAVKIEASTMKVIGEFSELVKPG--ARLTRHTTKL 63
Query: 63 TGIQQHQVDNGITLGEALYFHDKWLLQMGLNNTNFSVVTWSDWDCQVMLESECRIKKIQK 122
TGI + + + + +K++ +G ++ VTW D + ++ +C + +
Sbjct: 64 TGITKKDLMGVEKFPQII---EKFIQFIGEDSI---FVTWGKEDYRFLV-HDCTLHGVDC 116
Query: 123 PAYFNQW-INLRVPFSKVFGDV---RCNLKEAVELAGLIWQGRVHCGLDDAINIARLL 176
P + I+L+ + + ++ +L+ AVE GL W+G+ H L DA N A +L
Sbjct: 117 PCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLTWEGKQHRALADAENTANIL 174
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,702,229,947
Number of Sequences: 23463169
Number of extensions: 189517491
Number of successful extensions: 406420
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 403888
Number of HSP's gapped (non-prelim): 1403
length of query: 277
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 137
effective length of database: 9,074,351,707
effective search space: 1243186183859
effective search space used: 1243186183859
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)