Query 036889
Match_columns 86
No_of_seqs 145 out of 1036
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 10:29:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.8 4.8E-19 1.6E-23 102.1 9.6 66 2-69 1-67 (68)
2 1cc8_A Protein (metallochapero 99.8 7.5E-18 2.6E-22 97.6 10.4 67 1-68 3-71 (73)
3 3dxs_X Copper-transporting ATP 99.8 1.2E-17 4.2E-22 96.6 10.1 67 2-68 1-71 (74)
4 4a4j_A Pacszia, cation-transpo 99.7 3.2E-17 1.1E-21 93.5 9.1 65 2-66 1-68 (69)
5 3fry_A Probable copper-exporti 99.7 1.5E-17 5.1E-22 96.8 7.4 65 1-67 3-68 (73)
6 2xmw_A PACS-N, cation-transpor 99.7 4.3E-16 1.5E-20 87.6 10.2 63 1-63 1-65 (71)
7 2crl_A Copper chaperone for su 99.7 1.2E-15 4.2E-20 94.2 10.9 71 2-73 18-89 (98)
8 2roe_A Heavy metal binding pro 99.6 9.7E-16 3.3E-20 86.3 6.1 59 5-63 2-60 (66)
9 2xmm_A SSR2857 protein, ATX1; 99.6 1.7E-15 5.8E-20 83.6 6.9 59 5-63 3-61 (64)
10 2l3m_A Copper-ION-binding prot 99.6 1.3E-14 4.3E-19 81.8 9.6 62 2-63 4-68 (71)
11 1osd_A MERP, hypothetical prot 99.6 8.9E-15 3E-19 82.5 8.4 62 2-63 2-66 (72)
12 1aw0_A Menkes copper-transport 99.6 1.5E-14 5E-19 81.5 9.2 62 3-64 3-67 (72)
13 2qif_A Copper chaperone COPZ; 99.6 2E-14 6.7E-19 79.3 9.5 61 3-63 2-65 (69)
14 3cjk_B Copper-transporting ATP 99.6 3.2E-14 1.1E-18 81.2 10.4 65 3-67 2-70 (75)
15 2k2p_A Uncharacterized protein 99.6 5.7E-15 1.9E-19 89.0 7.1 61 3-63 22-82 (85)
16 1mwy_A ZNTA; open-faced beta-s 99.6 2.8E-14 9.4E-19 81.4 9.0 63 2-64 2-65 (73)
17 1kvi_A Copper-transporting ATP 99.6 2.1E-14 7E-19 82.9 8.2 64 3-66 8-75 (79)
18 1y3j_A Copper-transporting ATP 99.6 1.3E-14 4.3E-19 83.6 7.0 65 2-66 2-70 (77)
19 1fvq_A Copper-transporting ATP 99.6 4.3E-14 1.5E-18 79.6 9.0 64 4-67 3-69 (72)
20 2aj0_A Probable cadmium-transp 99.5 1E-14 3.6E-19 83.0 6.0 59 1-63 1-59 (71)
21 1cpz_A Protein (COPZ); copper 99.5 3.3E-14 1.1E-18 79.1 7.9 59 5-63 2-63 (68)
22 1yjr_A Copper-transporting ATP 99.5 2.9E-14 9.8E-19 80.9 7.3 61 3-63 4-67 (75)
23 1yg0_A COP associated protein; 99.5 3E-14 1E-18 78.8 7.1 59 5-63 3-63 (66)
24 2g9o_A Copper-transporting ATP 99.5 5.3E-14 1.8E-18 84.7 8.2 63 4-66 4-73 (90)
25 1q8l_A Copper-transporting ATP 99.5 4.2E-14 1.4E-18 83.4 7.2 62 3-64 9-73 (84)
26 2kt2_A Mercuric reductase; nme 99.5 5.4E-14 1.9E-18 78.9 7.3 60 5-64 2-63 (69)
27 1jww_A Potential copper-transp 99.5 8.5E-14 2.9E-18 79.9 8.1 63 2-64 2-67 (80)
28 1opz_A Potential copper-transp 99.5 1.2E-13 4.2E-18 78.0 8.6 63 2-64 5-70 (76)
29 2kyz_A Heavy metal binding pro 99.5 4.3E-14 1.5E-18 79.7 6.5 57 5-63 3-59 (67)
30 2ldi_A Zinc-transporting ATPas 99.5 7E-14 2.4E-18 77.8 7.1 61 3-63 3-66 (71)
31 2ew9_A Copper-transporting ATP 99.5 1.6E-13 5.4E-18 87.3 8.5 61 3-63 80-143 (149)
32 2kkh_A Putative heavy metal tr 99.5 3E-13 1E-17 81.6 8.8 66 2-67 15-84 (95)
33 2ofg_X Zinc-transporting ATPas 99.5 3.1E-13 1E-17 84.5 8.6 62 2-63 7-71 (111)
34 1p6t_A Potential copper-transp 99.4 2.9E-13 9.9E-18 86.6 7.7 64 3-66 74-141 (151)
35 2ew9_A Copper-transporting ATP 99.4 5.6E-13 1.9E-17 84.8 8.6 64 1-64 2-68 (149)
36 1qup_A Superoxide dismutase 1 99.4 6.6E-13 2.3E-17 93.2 9.4 69 3-72 6-75 (222)
37 1jk9_B CCS, copper chaperone f 99.4 1.8E-12 6.1E-17 92.5 9.1 68 4-72 8-76 (249)
38 2rop_A Copper-transporting ATP 99.4 2.5E-12 8.5E-17 86.9 9.3 65 3-67 122-190 (202)
39 1p6t_A Potential copper-transp 99.2 9.6E-11 3.3E-15 74.7 8.6 62 2-63 5-69 (151)
40 2rop_A Copper-transporting ATP 99.2 7.7E-11 2.6E-15 79.5 7.9 60 2-61 19-81 (202)
41 3j09_A COPA, copper-exporting 99.1 4.5E-10 1.5E-14 89.3 8.8 61 4-64 3-66 (723)
42 3bpd_A Uncharacterized protein 96.3 0.0093 3.2E-07 37.2 5.1 65 3-69 7-79 (100)
43 2x3d_A SSO6206; unknown functi 96.2 0.012 4.1E-07 36.5 5.3 66 3-70 5-79 (96)
44 2raq_A Conserved protein MTH88 96.1 0.012 4E-07 36.6 5.1 66 3-70 7-80 (97)
45 2jsx_A Protein NAPD; TAT, proo 91.6 1.2 4.1E-05 27.0 7.1 47 15-61 16-63 (95)
46 3cq1_A Putative uncharacterize 89.7 0.56 1.9E-05 28.3 4.4 35 4-39 42-82 (103)
47 3lno_A Putative uncharacterize 89.6 0.34 1.2E-05 29.7 3.4 34 5-39 46-86 (108)
48 2khp_A Glutaredoxin; thioredox 87.9 1.1 3.6E-05 25.4 4.5 36 1-39 4-39 (92)
49 1uwd_A Hypothetical protein TM 87.6 0.91 3.1E-05 27.3 4.3 34 4-38 43-82 (103)
50 2cpq_A FragIle X mental retard 83.3 4.5 0.00016 24.3 5.9 43 20-63 35-77 (91)
51 1t1v_A SH3BGRL3, SH3 domain-bi 80.5 2.4 8.1E-05 24.3 3.8 37 1-40 1-42 (93)
52 2klx_A Glutaredoxin; thioredox 78.0 2.1 7.3E-05 24.0 3.0 34 1-37 4-37 (89)
53 2lqo_A Putative glutaredoxin R 76.0 4 0.00014 24.0 3.9 36 1-39 1-37 (92)
54 3ic4_A Glutaredoxin (GRX-1); s 74.3 2.7 9.2E-05 23.6 2.8 34 2-38 11-44 (92)
55 1owx_A Lupus LA protein, SS-B, 72.1 15 0.00051 22.9 6.1 60 2-61 16-76 (121)
56 3rdw_A Putative arsenate reduc 71.7 8.3 0.00029 23.7 4.8 44 12-63 13-56 (121)
57 1h75_A Glutaredoxin-like prote 70.1 8 0.00027 20.8 4.1 26 12-39 9-34 (81)
58 3lvj_C Sulfurtransferase TUSA; 69.9 13 0.00045 21.2 6.8 53 3-64 9-63 (82)
59 1r7h_A NRDH-redoxin; thioredox 69.6 8.5 0.00029 20.2 4.1 26 12-39 9-34 (75)
60 1je3_A EC005, hypothetical 8.6 69.5 6.4 0.00022 23.7 3.8 55 1-64 24-80 (97)
61 1jdq_A TM006 protein, hypothet 69.3 16 0.00053 21.9 6.7 52 4-64 26-79 (98)
62 2ct6_A SH3 domain-binding glut 68.9 8.5 0.00029 22.9 4.3 34 5-40 10-48 (111)
63 2nyt_A Probable C->U-editing e 68.2 6.6 0.00023 26.5 4.0 55 4-63 84-140 (190)
64 3gkx_A Putative ARSC family re 67.6 17 0.00059 22.2 5.6 48 6-63 8-55 (120)
65 3hz7_A Uncharacterized protein 66.4 17 0.00057 21.2 5.9 49 6-64 3-55 (87)
66 4gwb_A Peptide methionine sulf 66.3 26 0.00088 23.3 7.0 54 1-60 1-72 (168)
67 1s3c_A Arsenate reductase; ARS 66.0 11 0.00039 23.7 4.6 53 1-63 1-53 (141)
68 1ego_A Glutaredoxin; electron 64.1 6.2 0.00021 21.4 2.8 26 12-38 9-38 (85)
69 2fgx_A Putative thioredoxin; N 60.1 14 0.00049 22.3 4.1 27 12-39 38-67 (107)
70 2kok_A Arsenate reductase; bru 58.4 15 0.0005 22.2 4.0 44 12-63 13-56 (120)
71 1dtj_A RNA-binding neurooncolo 57.9 21 0.00073 19.6 6.5 55 1-59 1-67 (76)
72 2kgs_A Uncharacterized protein 57.3 5.8 0.0002 24.9 2.0 51 24-74 69-127 (132)
73 3msz_A Glutaredoxin 1; alpha-b 57.1 18 0.00061 19.5 4.0 27 2-32 4-30 (89)
74 3q9p_A Heat shock protein beta 55.5 12 0.00041 21.4 3.1 24 27-50 14-39 (85)
75 2e9h_A EIF-5, eukaryotic trans 55.2 19 0.00065 23.7 4.3 27 34-60 72-98 (157)
76 2yy3_A Elongation factor 1-bet 55.2 21 0.00071 21.4 4.2 21 17-37 66-86 (91)
77 1aba_A Glutaredoxin; electron 53.9 26 0.00089 19.3 5.9 25 13-39 13-37 (87)
78 3fz4_A Putative arsenate reduc 53.3 35 0.0012 20.7 6.6 48 6-63 7-54 (120)
79 2hiy_A Hypothetical protein; C 53.1 46 0.0016 21.9 6.2 45 18-63 24-73 (183)
80 1nho_A Probable thioredoxin; b 52.9 15 0.00051 19.4 3.1 39 1-40 1-43 (85)
81 3gzb_A Putative snoal-like pol 52.3 18 0.0006 23.7 3.7 32 27-58 119-151 (154)
82 1wik_A Thioredoxin-like protei 51.1 29 0.00099 20.1 4.4 27 12-40 28-54 (109)
83 3pro_C Alpha-lytic protease; P 48.7 38 0.0013 22.3 5.0 34 29-62 114-148 (166)
84 2y1y_A Alpha-crystallin B chai 46.7 14 0.00048 21.3 2.4 22 27-48 13-36 (90)
85 3qmx_A Glutaredoxin A, glutare 46.5 32 0.0011 19.9 4.0 32 5-39 18-49 (99)
86 3gla_A Low molecular weight he 45.6 11 0.00038 21.9 1.8 22 27-48 21-44 (100)
87 1fov_A Glutaredoxin 3, GRX3; a 44.7 34 0.0012 18.0 4.1 26 12-39 9-34 (82)
88 3f0i_A Arsenate reductase; str 44.1 20 0.00069 21.8 3.0 44 12-63 12-55 (119)
89 2v50_A Multidrug resistance pr 44.0 38 0.0013 27.7 5.3 44 18-61 159-210 (1052)
90 2wj5_A Heat shock protein beta 43.5 17 0.00056 21.5 2.4 22 27-48 18-41 (101)
91 2g2k_A EIF-5, eukaryotic trans 42.6 27 0.00092 23.3 3.5 27 34-60 65-91 (170)
92 4fei_A Heat shock protein-rela 42.5 13 0.00045 21.9 1.8 23 27-49 23-47 (102)
93 2d74_B Translation initiation 42.2 23 0.00077 23.1 3.1 24 35-60 76-99 (148)
94 4dx5_A Acriflavine resistance 41.5 44 0.0015 27.3 5.3 43 18-60 159-209 (1057)
95 1vbk_A Hypothetical protein PH 40.9 35 0.0012 24.1 4.2 45 16-62 25-70 (307)
96 2ko1_A CTR148A, GTP pyrophosph 40.5 44 0.0015 18.1 4.7 16 19-34 60-75 (88)
97 3l1e_A Alpha-crystallin A chai 40.4 20 0.00067 21.4 2.4 22 27-48 19-42 (106)
98 3zyw_A Glutaredoxin-3; metal b 40.0 42 0.0014 19.8 3.9 40 12-63 29-69 (111)
99 1gh8_A Translation elongation 39.6 20 0.0007 21.3 2.3 23 15-37 61-83 (89)
100 4e6k_G BFD, bacterioferritin-a 39.1 11 0.00038 21.6 1.0 18 11-28 35-52 (73)
101 2yan_A Glutaredoxin-3; oxidore 38.7 32 0.0011 19.7 3.2 26 12-39 30-55 (105)
102 2wci_A Glutaredoxin-4; redox-a 38.3 39 0.0013 21.0 3.7 26 12-39 48-73 (135)
103 3h8q_A Thioredoxin reductase 3 37.5 45 0.0015 19.5 3.7 49 5-63 19-68 (114)
104 1fo5_A Thioredoxin; disulfide 37.5 45 0.0015 17.3 4.6 30 11-40 11-44 (85)
105 1pav_A Hypothetical protein TA 37.3 7.8 0.00027 21.8 0.2 51 5-64 7-59 (78)
106 3l4n_A Monothiol glutaredoxin- 37.3 68 0.0023 19.6 4.7 50 5-63 16-68 (127)
107 1wjk_A C330018D20RIK protein; 37.2 58 0.002 18.5 4.3 27 12-39 25-52 (100)
108 3aab_A Putative uncharacterize 37.1 18 0.00061 22.0 1.9 23 27-49 41-66 (123)
109 2fi0_A Conserved domain protei 36.8 31 0.0011 19.6 2.8 16 49-64 61-76 (81)
110 2e3u_A PH-DIM2P, hypothetical 36.8 57 0.0019 22.2 4.6 40 19-59 53-95 (219)
111 3ipz_A Monothiol glutaredoxin- 36.7 28 0.00096 20.4 2.7 39 13-63 32-71 (109)
112 4eld_A MJ16.5-P1, small heat s 36.6 23 0.00079 22.5 2.4 22 27-48 73-96 (161)
113 1ec6_A RNA-binding protein NOV 36.6 58 0.002 18.3 5.0 55 1-59 1-67 (87)
114 3l7p_A Putative nitrogen regul 36.2 51 0.0017 20.1 3.9 31 1-36 2-33 (115)
115 2j58_A WZA, outer membrane lip 36.0 31 0.001 25.1 3.3 56 7-62 114-182 (359)
116 2wem_A Glutaredoxin-related pr 36.0 37 0.0013 20.5 3.2 39 13-63 34-74 (118)
117 3c1r_A Glutaredoxin-1; oxidize 34.6 65 0.0022 18.9 4.2 32 5-38 27-61 (118)
118 2fwh_A Thiol:disulfide interch 34.1 71 0.0024 18.6 5.3 35 5-39 34-74 (134)
119 3ctg_A Glutaredoxin-2; reduced 33.9 65 0.0022 19.4 4.2 50 5-63 39-92 (129)
120 1kaf_A Transcription regulator 33.6 73 0.0025 19.8 4.2 36 27-63 42-77 (108)
121 1u6t_A SH3 domain-binding glut 33.5 76 0.0026 19.6 4.4 33 5-39 2-39 (121)
122 3gx8_A Monothiol glutaredoxin- 33.3 42 0.0014 20.2 3.2 25 13-39 30-57 (121)
123 3l78_A Regulatory protein SPX; 33.2 80 0.0027 18.9 7.0 43 12-62 8-50 (120)
124 1fvg_A Peptide methionine sulf 33.1 87 0.003 21.3 5.0 47 11-60 49-117 (199)
125 1kte_A Thioltransferase; redox 33.1 65 0.0022 17.9 4.4 25 5-32 14-38 (105)
126 2gag_A Heterotetrameric sarcos 32.8 4.7 0.00016 32.9 -1.7 35 3-38 21-56 (965)
127 1qys_A TOP7; alpha-beta, novel 32.5 81 0.0028 18.8 4.8 32 19-51 65-96 (106)
128 2hze_A Glutaredoxin-1; thiored 32.3 75 0.0025 18.3 4.4 25 5-32 21-45 (114)
129 1nm3_A Protein HI0572; hybrid, 32.2 66 0.0023 20.9 4.3 34 4-40 171-204 (241)
130 3rhb_A ATGRXC5, glutaredoxin-C 32.1 71 0.0024 18.2 4.0 50 5-63 21-71 (113)
131 3v4k_A DNA DC->DU-editing enzy 30.5 56 0.0019 22.3 3.7 59 5-68 102-162 (203)
132 1f60_B Elongation factor EEF1B 30.4 40 0.0014 20.2 2.6 23 15-37 66-89 (94)
133 3bqh_A PILB, peptide methionin 30.2 1.1E+02 0.0039 20.5 5.1 46 11-59 8-75 (193)
134 1tua_A Hypothetical protein AP 30.0 1.2E+02 0.0042 20.1 5.9 52 5-58 6-64 (191)
135 2z51_A NIFU-like protein 2, ch 29.7 84 0.0029 20.3 4.3 32 4-36 118-153 (154)
136 4bby_A Alkyldihydroxyacetoneph 29.6 50 0.0017 25.7 3.7 30 34-63 267-296 (658)
137 1b64_A Elongation factor 1-bet 29.3 41 0.0014 20.0 2.5 23 15-37 63-86 (91)
138 3tsh_A Pollen allergen PHL P 4 28.3 70 0.0024 23.8 4.2 37 27-63 105-141 (500)
139 2k1h_A Uncharacterized protein 28.2 98 0.0033 18.4 5.7 40 19-60 39-80 (94)
140 2hh2_A KH-type splicing regula 28.1 87 0.003 18.5 3.9 52 4-59 8-71 (107)
141 2j9c_A GLNK1, hypothetical nit 27.5 93 0.0032 18.7 4.1 55 1-60 2-81 (119)
142 2yvs_A Glycolate oxidase subun 27.4 45 0.0016 22.5 2.8 30 34-63 1-30 (219)
143 1qd1_A Formiminotransferase-cy 27.2 1.8E+02 0.0063 21.2 6.2 42 17-58 18-61 (325)
144 2zzt_A Putative uncharacterize 27.1 39 0.0013 19.9 2.2 17 18-34 12-28 (107)
145 2p02_A S-adenosylmethionine sy 26.9 2E+02 0.0069 21.6 6.8 51 14-64 35-94 (396)
146 1nkw_F 50S ribosomal protein L 26.7 1.1E+02 0.0039 19.4 4.5 39 24-63 67-105 (146)
147 2z30_B TK-subtilisin; thermoco 26.3 37 0.0013 18.3 1.8 17 22-38 44-60 (65)
148 3boe_A Cadmium-specific carbon 26.0 62 0.0021 22.0 3.2 22 49-70 2-24 (210)
149 2j89_A Methionine sulfoxide re 25.7 1.3E+02 0.0045 21.3 5.0 47 11-60 100-168 (261)
150 3vow_A Probable DNA DC->DU-edi 25.7 94 0.0032 21.0 4.1 28 5-32 88-115 (190)
151 3htu_A Vacuolar protein-sortin 25.2 75 0.0026 18.4 3.1 22 49-70 47-71 (79)
152 1gme_A Heat shock protein 16.9 24.8 53 0.0018 20.7 2.6 22 27-48 60-84 (151)
153 1ff3_A Peptide methionine sulf 24.8 1.5E+02 0.005 20.3 5.0 47 11-60 48-116 (211)
154 2w7v_A General secretion pathw 24.7 1.2E+02 0.004 18.1 5.5 45 21-66 17-68 (95)
155 3aqo_A Probable secdf protein- 24.6 1.7E+02 0.0057 19.8 5.3 52 19-71 30-86 (229)
156 1p7l_A S-adenosylmethionine sy 24.6 2.2E+02 0.0076 21.3 6.8 51 14-64 19-78 (383)
157 4feh_A Oxidoreductase DPRE1; a 24.4 79 0.0027 23.7 3.9 37 28-64 94-131 (481)
158 2klr_A Alpha-crystallin B chai 24.2 49 0.0017 21.6 2.4 22 27-48 80-103 (175)
159 3qc0_A Sugar isomerase; TIM ba 24.0 46 0.0016 21.7 2.3 28 46-73 224-251 (275)
160 1ytb_A Protein (tata binding p 24.0 1E+02 0.0034 20.4 3.9 26 35-60 144-169 (180)
161 3u0h_A Xylose isomerase domain 23.9 64 0.0022 21.0 3.0 26 47-72 227-252 (281)
162 2c5s_A THII, probable thiamine 23.7 1.4E+02 0.0048 21.8 5.0 43 17-62 37-81 (413)
163 1pqx_A Conserved hypothetical 23.7 91 0.0031 18.4 3.4 40 19-60 39-80 (91)
164 3vni_A Xylose isomerase domain 23.6 49 0.0017 22.0 2.4 28 47-74 222-249 (294)
165 1mp9_A Tata-binding protein; t 23.5 1E+02 0.0035 20.7 3.9 26 35-60 152-177 (198)
166 3r8s_H 50S ribosomal protein L 23.4 74 0.0025 20.4 3.1 40 24-63 68-108 (149)
167 2p2r_A Poly(RC)-binding protei 23.3 99 0.0034 16.8 4.7 37 20-59 25-66 (76)
168 2gjh_A Designed protein; oblig 23.2 1E+02 0.0034 16.7 3.7 30 19-49 21-50 (62)
169 2ctf_A Vigilin; K homology typ 22.6 1.3E+02 0.0043 17.7 5.7 28 20-48 48-75 (102)
170 3ngf_A AP endonuclease, family 22.6 67 0.0023 21.2 2.9 51 21-71 196-248 (269)
171 1z3e_A Regulatory protein SPX; 22.4 1.4E+02 0.0046 18.0 4.8 42 11-60 8-49 (132)
172 1ais_A TBP, protein (tata-bind 22.4 1.1E+02 0.0039 20.1 3.9 25 36-60 149-173 (182)
173 2ks0_A Uncharacterized protein 22.3 31 0.0011 19.7 1.0 12 36-47 25-36 (71)
174 3ne5_A Cation efflux system pr 22.2 1.4E+02 0.0047 24.4 5.1 43 18-60 704-756 (1054)
175 2db7_A Hairy/enhancer-OF-split 21.7 56 0.0019 18.1 2.0 18 15-32 25-42 (64)
176 3byp_A CZRB protein; membrane 21.6 51 0.0018 18.5 1.9 17 18-34 12-30 (94)
177 2cuy_A Malonyl COA-[acyl carri 21.5 2.1E+02 0.0071 19.8 5.8 45 18-63 137-182 (305)
178 3mso_A Steroid delta-isomerase 21.4 61 0.0021 19.8 2.3 36 27-62 95-131 (143)
179 3qbc_A 2-amino-4-hydroxy-6-hyd 21.3 1.8E+02 0.006 18.9 6.2 57 2-59 4-78 (161)
180 3ami_A Zinc peptidase; alpha/b 21.2 83 0.0028 22.1 3.3 23 38-60 187-209 (445)
181 2bvf_A 6-hydroxy-D-nicotine ox 21.0 1E+02 0.0035 22.6 3.8 34 31-64 91-124 (459)
182 3mcb_A Nascent polypeptide-ass 20.9 79 0.0027 17.0 2.4 22 25-46 7-28 (54)
183 1i60_A IOLI protein; beta barr 20.8 62 0.0021 21.0 2.4 27 47-73 223-249 (278)
184 2vfr_A Xylitol oxidase, aldito 20.8 90 0.0031 22.6 3.5 36 28-63 67-103 (422)
185 2z8u_A Tata-box-binding protei 20.8 96 0.0033 20.6 3.3 25 36-60 153-177 (188)
186 2e0q_A Thioredoxin; electron t 20.8 1.1E+02 0.0036 16.2 5.5 36 5-40 19-57 (104)
187 3e0m_A Peptide methionine sulf 20.0 1.6E+02 0.0056 21.3 4.6 52 2-59 2-73 (313)
188 3nzn_A Glutaredoxin; structura 20.0 1.3E+02 0.0044 16.9 4.0 31 5-38 24-54 (103)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.80 E-value=4.8e-19 Score=102.13 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=61.4
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEEc
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVSV 69 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivsv 69 (86)
|++.+|+| ||+|.+|+.+|+++|.+++|| ++++|+.+++++|.+++++..|.++|+++|| +.+++.
T Consensus 1 m~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 45689999 999999999999999999999 9999999999999999999999999999999 777764
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.77 E-value=7.5e-18 Score=97.61 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=62.7
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccC-CccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEE
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIY-GVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVS 68 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~-GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivs 68 (86)
||++++|+|+ |+|.+|..+|+++|.+++ ||.++++|+.+++++|.+.+++..|.++|+++|| +.++.
T Consensus 3 ~m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 3 EIKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CCEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred CceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 4688999998 999999999999999999 9999999999999999999999999999999999 66554
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.75 E-value=1.2e-17 Score=96.58 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=62.3
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEEEE
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEIVS 68 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~ivs 68 (86)
|++++|.|+||+|.+|+.+|+++|.+++||.++.+|+.+++++|.++ +++..|.++|+++|| +.+++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 57789999999999999999999999999999999999999999975 799999999999999 66654
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.73 E-value=3.2e-17 Score=93.48 Aligned_cols=65 Identities=14% Similarity=0.231 Sum_probs=60.3
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEE--eCCHHHHHHHHHhhCC-eEE
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIG--DMDAVAIAKKLKKIGK-IEI 66 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g--~vd~~~l~~~l~k~G~-a~i 66 (86)
.++++|.|+||+|.+|..+|+++|.+++||.++.+|+.+++++|.+ .+++..|.++|+++|| +.+
T Consensus 1 a~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 1 AQTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp CEEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 3688999999999999999999999999999999999999999995 4899999999999999 543
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.73 E-value=1.5e-17 Score=96.81 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=61.1
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEE
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIV 67 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~iv 67 (86)
||++++|.|+||+|.+|..+|+++|.+ +||.++.+|+.+++++|.++ ++..|.++|+++|| +.+.
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~ 68 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLR 68 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEEC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEec
Confidence 578899999999999999999999999 99999999999999999999 99999999999999 5444
No 6
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.69 E-value=4.3e-16 Score=87.58 Aligned_cols=63 Identities=16% Similarity=0.222 Sum_probs=58.6
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCC
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGK 63 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~ 63 (86)
|++++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+++||
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~ 65 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGY 65 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTC
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCC
Confidence 889999999999999999999999999999999999999999999875 788999999999999
No 7
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=94.23 Aligned_cols=71 Identities=11% Similarity=0.247 Sum_probs=65.0
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEEcCCCC
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVSVGPAK 73 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivsv~~~~ 73 (86)
+.+++|+|+ |+|.+|..+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+++|| +.++..++..
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQ 89 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCCC
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCCc
Confidence 467899998 9999999999999999999999999999999999999999999999999999 7777665544
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.62 E-value=9.7e-16 Score=86.25 Aligned_cols=59 Identities=19% Similarity=0.306 Sum_probs=56.1
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
..|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+++||
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy 60 (66)
T 2roe_A 2 LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGY 60 (66)
T ss_dssp BCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTC
T ss_pred EEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999999999999767999999999999999
No 9
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.62 E-value=1.7e-15 Score=83.56 Aligned_cols=59 Identities=15% Similarity=0.230 Sum_probs=57.0
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+++||
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~ 61 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGY 61 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999999999988999999999999998
No 10
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.60 E-value=1.3e-14 Score=81.80 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=58.2
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
|.++.|+|+||+|.+|...|.++|.+++||.++.+|+..++++|.++ +++..|.++|+++||
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 68 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGY 68 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 56689999999999999999999999999999999999999999875 688999999999998
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.59 E-value=8.9e-15 Score=82.46 Aligned_cols=62 Identities=15% Similarity=0.211 Sum_probs=58.1
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
++++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|++.||
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 66 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGY 66 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCC
Confidence 35688999999999999999999999999999999999999999876 688999999999998
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.59 E-value=1.5e-14 Score=81.54 Aligned_cols=62 Identities=16% Similarity=0.133 Sum_probs=58.1
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
+++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+++||.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~ 67 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFD 67 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCC
Confidence 5678999999999999999999999999999999999999999986 6889999999999993
No 13
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.59 E-value=2e-14 Score=79.31 Aligned_cols=61 Identities=16% Similarity=0.238 Sum_probs=57.0
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
.+..|+|+||+|.+|...|.++|.+++||.++.+|+..++++|.++ +++..|.++|+.+||
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 65 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGY 65 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999999999875 688999999999998
No 14
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.58 E-value=3.2e-14 Score=81.18 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=59.5
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEEE
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEIV 67 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~iv 67 (86)
.++.|.|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+++|| +.+.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence 4678999999999999999999999999999999999999999975 688999999999999 5544
No 15
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.58 E-value=5.7e-15 Score=89.00 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=58.7
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
++++|.|+||+|.+|..+|+++|.+++||.++.+|+..++++|.+.+++..|.++|+++||
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy 82 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGY 82 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999999999999999999999998
No 16
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.57 E-value=2.8e-14 Score=81.43 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=56.8
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeC-CHHHHHHHHHhhCCe
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDM-DAVAIAKKLKKIGKI 64 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~v-d~~~l~~~l~k~G~a 64 (86)
|.++.|.|+||+|.+|..+|.++|.+++||.++.+|+..++++|.++. ....|.++|+.+||.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~ 65 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYS 65 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCc
Confidence 345799999999999999999999999999999999999999999863 367889999999993
No 17
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.56 E-value=2.1e-14 Score=82.93 Aligned_cols=64 Identities=19% Similarity=0.246 Sum_probs=58.9
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEE
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEI 66 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~i 66 (86)
+++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+++|| +.+
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 5788999999999999999999999999999999999999999875 678999999999999 443
No 18
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.56 E-value=1.3e-14 Score=83.62 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=59.5
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEE
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEI 66 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~i 66 (86)
|+++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+.+|| +.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 70 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATV 70 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence 56689999999999999999999999999999999999999999875 688899999999999 444
No 19
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.55 E-value=4.3e-14 Score=79.57 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=58.7
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCC-eEEE
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGK-IEIV 67 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~-a~iv 67 (86)
++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|++.|| +.++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEc
Confidence 468999999999999999999999999999999999999999875 778999999999999 5554
No 20
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.55 E-value=1e-14 Score=82.98 Aligned_cols=59 Identities=17% Similarity=0.299 Sum_probs=54.5
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
|+++.+|.|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++.+ ..+|+++||
T Consensus 1 m~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy 59 (71)
T 2aj0_A 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGA 59 (71)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHT
T ss_pred CCeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCC
Confidence 78888999999999999999999999999999999999999999998765 457788998
No 21
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.55 E-value=3.3e-14 Score=79.09 Aligned_cols=59 Identities=22% Similarity=0.338 Sum_probs=55.6
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
+.|+|+||+|.+|...|+++|.+++||.++.+|+..++++|.++ +++..|.++|++.||
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 63 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSS
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999999999999985 688999999999998
No 22
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.54 E-value=2.9e-14 Score=80.89 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=57.1
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
+++.|+|+||+|.+|..+|.++|.+++||.++.+|+..++++|.++ +++..|.++|+++||
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 67 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGF 67 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 5788999999999999999999999999999999999999999986 567889999999999
No 23
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.54 E-value=3e-14 Score=78.83 Aligned_cols=59 Identities=15% Similarity=0.225 Sum_probs=55.7
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~ 63 (86)
..|.|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ .++..|.++|+++||
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~ 63 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQ 63 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999999999999976 588999999999998
No 24
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.52 E-value=5.3e-14 Score=84.74 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=57.4
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhh---CC-eEE
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKI---GK-IEI 66 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~---G~-a~i 66 (86)
++.|.|+||+|.+|+.+|.++|.+++||.++.+|+..++++|.++ +++..|.++|+++ || +.+
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~ 73 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSI 73 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEEC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEE
Confidence 568999999999999999999999999999999999999999874 6889999999999 58 443
No 25
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.52 E-value=4.2e-14 Score=83.40 Aligned_cols=62 Identities=16% Similarity=0.241 Sum_probs=58.0
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
.++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+++||.
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~ 73 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFP 73 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCc
Confidence 4678999999999999999999999999999999999999999985 6889999999999993
No 26
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.52 E-value=5.4e-14 Score=78.91 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=55.9
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
+.|.|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ .++..|..+|+++||.
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~ 63 (69)
T 2kt2_A 2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYK 63 (69)
T ss_dssp CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSE
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCc
Confidence 36899999999999999999999999999999999999999876 6889999999999993
No 27
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.51 E-value=8.5e-14 Score=79.94 Aligned_cols=63 Identities=10% Similarity=0.139 Sum_probs=57.9
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
|.+..|.|+||+|.+|..+|.++|.+++||.++.+|+..++++|.++ +++..|.++|.++||.
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~ 67 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYK 67 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSE
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCe
Confidence 44578999999999999999999999999999999999999999874 6888999999999993
No 28
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.51 E-value=1.2e-13 Score=78.04 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=58.2
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
|.+..|+|+||+|.+|...|.++|.+++||.++.+|+..++++|.++ +++..|..+|+++||.
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~ 70 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYH 70 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCE
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCc
Confidence 45678999999999999999999999999999999999999999874 6889999999999993
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.51 E-value=4.3e-14 Score=79.73 Aligned_cols=57 Identities=21% Similarity=0.311 Sum_probs=54.0
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
..|.|+||+|.+|..+|+++|.++ ||.++.+|+..++++|.++.+ ..|..+|+++||
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy 59 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDY 59 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCC
Confidence 579999999999999999999999 999999999999999998766 889999999998
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.51 E-value=7e-14 Score=77.80 Aligned_cols=61 Identities=13% Similarity=0.233 Sum_probs=56.7
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
.+..|+|+||+|.+|..+|.++|.+++||.++.+|+..++++|.++ ++...+.++|+.+||
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 66 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGY 66 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTC
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999999999875 678889999999998
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=87.31 Aligned_cols=61 Identities=16% Similarity=0.180 Sum_probs=57.7
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
.++.|+|+||+|.+|..+|+++|.+++||.++.+|+.+++++|.++ +++..|.++|+++||
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy 143 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGF 143 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999999999999976 688999999999999
No 32
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.48 E-value=3e-13 Score=81.60 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=59.6
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEEE
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEIV 67 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~iv 67 (86)
|.++.|.|+||+|.+|...|.++|..++||.++.+|+..+.++|.++ +++..|..+|+.+|| +.+.
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 84 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVR 84 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEe
Confidence 45678999999999999999999999999999999999999999975 578999999999999 4443
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.47 E-value=3.1e-13 Score=84.52 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=58.0
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
|+++.|+|+||+|.+|+.+|+++|.+++||.++.+|+..++++|.++ +++..|.++|+.+||
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy 71 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGY 71 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 45678999999999999999999999999999999999999999986 678999999999998
No 34
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.45 E-value=2.9e-13 Score=86.59 Aligned_cols=64 Identities=9% Similarity=0.180 Sum_probs=59.0
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEE
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEI 66 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~i 66 (86)
.++.|+|+||+|.+|..+|+++|.+++||.++.+|+.+++++|.++ +++..|.++|+++|| +.+
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 141 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKL 141 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEE
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEE
Confidence 4578999999999999999999999999999999999999999975 789999999999999 444
No 35
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.44 E-value=5.6e-13 Score=84.75 Aligned_cols=64 Identities=19% Similarity=0.149 Sum_probs=59.0
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
=|++++|.|+||+|.+|..+|+++|.+++||.++.+++..++++|.++ +++..+.++|+..||.
T Consensus 2 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~ 68 (149)
T 2ew9_A 2 APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFE 68 (149)
T ss_dssp CCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCE
T ss_pred CcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCc
Confidence 068899999999999999999999999999999999999999999874 6788999999999993
No 36
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.43 E-value=6.6e-13 Score=93.25 Aligned_cols=69 Identities=17% Similarity=0.268 Sum_probs=62.5
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEEcCCC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVSVGPA 72 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivsv~~~ 72 (86)
.+++|+|+ |+|.+|+.+|+++|.+++||.++++|+.+++++|.+.+++..|.++|+++|| +.++..+++
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 35789998 9999999999999999999999999999999999999999999999999999 666655443
No 37
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.39 E-value=1.8e-12 Score=92.54 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=62.6
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEEcCCC
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVSVGPA 72 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivsv~~~ 72 (86)
+++|+|+ |+|.+|+.+|+++|.+++||.++++|+.+++++|.+.+++..|.++|+++|| +.++..+++
T Consensus 8 ~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 8 EATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 5789998 9999999999999999999999999999999999998999999999999999 676665544
No 38
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.39 E-value=2.5e-12 Score=86.87 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=59.4
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC-eEEE
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK-IEIV 67 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~-a~iv 67 (86)
.++.|+|+||+|.+|..+|+++|.+++||.++.+|+..++++|.++ +++..|..+|+++|| +.++
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 190 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVV 190 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEc
Confidence 3578999999999999999999999999999999999999999975 688999999999999 5544
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.20 E-value=9.6e-11 Score=74.72 Aligned_cols=62 Identities=18% Similarity=0.300 Sum_probs=57.0
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCC
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGK 63 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~ 63 (86)
+.+..|.|+||+|.+|..+|+++|.+++||.++.+++..++++|..+ +++..+..+++..||
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~ 69 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGY 69 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTC
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCC
Confidence 45678999999999999999999999999999999999999999864 578889999999998
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.18 E-value=7.7e-11 Score=79.50 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=55.3
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhh
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKI 61 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~ 61 (86)
+.++.|+|+||+|.+|..+|+++|.+++||.++.+++..++++|.++ +++..|..+|+.+
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999999975 6788999999987
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.07 E-value=4.5e-10 Score=89.26 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=57.6
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHHhhCCe
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~k~G~a 64 (86)
+++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|.++ ++++++.++|++.||.
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~ 66 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYG 66 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCE
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCc
Confidence 368999999999999999999999999999999999999999975 7899999999999994
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=96.26 E-value=0.0093 Score=37.23 Aligned_cols=65 Identities=26% Similarity=0.390 Sum_probs=44.7
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEE-----ecCCC--EEEEEEe-CCHHHHHHHHHhhCCeEEEEc
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITA-----DLKEQ--KLIIIGD-MDAVAIAKKLKKIGKIEIVSV 69 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~v-----d~~~~--~vtV~g~-vd~~~l~~~l~k~G~a~ivsv 69 (86)
+.++|-|--.+-+.- -.+-++|++++||..|.+ |.++. ++||.|+ +|.+.|.++|++.|- .|-|+
T Consensus 7 RRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Gg-vIHSI 79 (100)
T 3bpd_A 7 RRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGG-VIHSV 79 (100)
T ss_dssp EEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTC-EEEEE
T ss_pred eEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC-eEEee
Confidence 455666643333333 567788999999998654 44443 4666786 999999999999983 34454
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=96.19 E-value=0.012 Score=36.53 Aligned_cols=66 Identities=24% Similarity=0.367 Sum_probs=45.1
Q ss_pred eEEEEEEeec-ccHhHHHHHHHHHhccCCccEEEE-----ecCCC--EEEEEEe-CCHHHHHHHHHhhCCeEEEEcC
Q 036889 3 RMVVLKMMTM-NDEKTKQKAIEAAADIYGVDSITA-----DLKEQ--KLIIIGD-MDAVAIAKKLKKIGKIEIVSVG 70 (86)
Q Consensus 3 ~~vvlkV~~m-~C~~C~~kI~kal~~l~GV~~v~v-----d~~~~--~vtV~g~-vd~~~l~~~l~k~G~a~ivsv~ 70 (86)
+.++|-|--. |-+.- -.+-++|++++||..|.+ |.++. ++|+.|+ +|.+.+.++|++.| +.|.|+.
T Consensus 5 rRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~G-g~IHSID 79 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEG-CAIHSID 79 (96)
T ss_dssp EEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC-CeEEeee
Confidence 4455555322 33333 567788999999998654 44443 4667786 99999999999998 3455553
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=96.14 E-value=0.012 Score=36.65 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=45.2
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEE-----ecCCC--EEEEEEe-CCHHHHHHHHHhhCCeEEEEcC
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITA-----DLKEQ--KLIIIGD-MDAVAIAKKLKKIGKIEIVSVG 70 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~v-----d~~~~--~vtV~g~-vd~~~l~~~l~k~G~a~ivsv~ 70 (86)
+.++|-|--.|-+.- -.+-++|++++||..|.+ |.++. ++||.|+ +|.+.|.++|++.|- .|.|+.
T Consensus 7 rRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg-~IHSID 80 (97)
T 2raq_A 7 IRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG-SIHSVD 80 (97)
T ss_dssp EEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC-EEEEEE
T ss_pred eEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC-eEEeee
Confidence 455666643333333 567788999999987654 55554 4666786 999999999999983 455553
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=91.61 E-value=1.2 Score=26.98 Aligned_cols=47 Identities=11% Similarity=0.229 Sum_probs=34.7
Q ss_pred HhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe-CCHHHHHHHHHhh
Q 036889 15 EKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD-MDAVAIAKKLKKI 61 (86)
Q Consensus 15 ~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~-vd~~~l~~~l~k~ 61 (86)
++=...|..+|.+++||+---+|...+++.|+-+ -+...+.+.|++.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 4557899999999999954455777889888865 5666666666553
No 46
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=89.73 E-value=0.56 Score=28.30 Aligned_cols=35 Identities=14% Similarity=0.303 Sum_probs=26.6
Q ss_pred EEEEEEeecccHhH------HHHHHHHHhccCCccEEEEecC
Q 036889 4 MVVLKMMTMNDEKT------KQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 4 ~vvlkV~~m~C~~C------~~kI~kal~~l~GV~~v~vd~~ 39 (86)
.+.+.+ .+++.+| ...|+.+|.+++||.+|++++.
T Consensus 42 ~V~v~l-~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRM-TLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEE-CCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEE-EECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 355666 4677666 4679999999999999988753
No 47
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=89.64 E-value=0.34 Score=29.68 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=26.6
Q ss_pred EEEEEeecccHhH------HHHHHHHH-hccCCccEEEEecC
Q 036889 5 VVLKMMTMNDEKT------KQKAIEAA-ADIYGVDSITADLK 39 (86)
Q Consensus 5 vvlkV~~m~C~~C------~~kI~kal-~~l~GV~~v~vd~~ 39 (86)
+.+.+ .++..+| ...|+.+| .+++||.+|++++.
T Consensus 46 V~V~l-tlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 46 AVITM-TMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp EEEEE-CCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred EEEEE-EECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 56666 4677776 67899999 99999999888754
No 48
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=87.85 E-value=1.1 Score=25.38 Aligned_cols=36 Identities=14% Similarity=-0.017 Sum_probs=25.0
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
||..+++-- .-.|+.| .+++..|... |+.-..+|..
T Consensus 4 ~m~~v~ly~-~~~C~~C-~~~~~~L~~~-~i~~~~~di~ 39 (92)
T 2khp_A 4 SMVDVIIYT-RPGCPYC-ARAKALLARK-GAEFNEIDAS 39 (92)
T ss_dssp CCCCEEEEE-CTTCHHH-HHHHHHHHHT-TCCCEEEEST
T ss_pred CcccEEEEE-CCCChhH-HHHHHHHHHc-CCCcEEEECC
Confidence 565566555 4689999 6788888875 6765555554
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=87.61 E-value=0.91 Score=27.29 Aligned_cols=34 Identities=32% Similarity=0.356 Sum_probs=25.0
Q ss_pred EEEEEEeecccHhH------HHHHHHHHhccCCccEEEEec
Q 036889 4 MVVLKMMTMNDEKT------KQKAIEAAADIYGVDSITADL 38 (86)
Q Consensus 4 ~vvlkV~~m~C~~C------~~kI~kal~~l~GV~~v~vd~ 38 (86)
.+.+.+ .++..+| ...|+.+|.+++||.+|++++
T Consensus 43 ~V~v~l-~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLM-TMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEE-CCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEE-EECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 345566 3565555 467899999999999998874
No 50
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=83.35 E-value=4.5 Score=24.33 Aligned_cols=43 Identities=26% Similarity=0.237 Sum_probs=31.5
Q ss_pred HHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 20 KAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 20 kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+.-+.+....|+.+++++-++++|+|.| .|.+.+-+|....-+
T Consensus 35 k~Ik~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~~I~~ 77 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARGFLEF 77 (91)
T ss_dssp HHHHHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHHHHHh
Confidence 3445556668998899987779999998 577777777665543
No 51
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=80.48 E-value=2.4 Score=24.34 Aligned_cols=37 Identities=8% Similarity=0.057 Sum_probs=26.5
Q ss_pred CceEEEEEEeecccHhHH-----HHHHHHHhccCCccEEEEecCC
Q 036889 1 MARMVVLKMMTMNDEKTK-----QKAIEAAADIYGVDSITADLKE 40 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~-----~kI~kal~~l~GV~~v~vd~~~ 40 (86)
|.+ +++-. --.|+.|. .++++.|.+. ||.-..+|...
T Consensus 1 M~~-v~ly~-~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~ 42 (93)
T 1t1v_A 1 MSG-LRVYS-TSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQ 42 (93)
T ss_dssp CCC-EEEEE-CSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTS
T ss_pred CCC-EEEEE-cCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCC
Confidence 554 44444 36899997 8899999875 88776777653
No 52
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=78.02 E-value=2.1 Score=23.99 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=22.7
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEe
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITAD 37 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd 37 (86)
||..+++-- .-.|+.| .+++..|... |+.-..+|
T Consensus 4 mm~~v~~y~-~~~C~~C-~~~~~~L~~~-~i~~~~vd 37 (89)
T 2klx_A 4 SMKEIILYT-RPNCPYC-KRARDLLDKK-GVKYTDID 37 (89)
T ss_dssp CCCCEEEES-CSCCTTT-HHHHHHHHHH-TCCEEEEC
T ss_pred CcceEEEEE-CCCChhH-HHHHHHHHHc-CCCcEEEE
Confidence 665566554 4689999 5788888876 56544444
No 53
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=75.98 E-value=4 Score=24.04 Aligned_cols=36 Identities=11% Similarity=-0.011 Sum_probs=25.8
Q ss_pred Cc-eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 1 MA-RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 1 M~-~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
|| ..|++-- --.|+.| .++++.|.+ .||.-..+|..
T Consensus 1 M~ta~I~vYs-~~~Cp~C-~~aK~~L~~-~gi~y~~idi~ 37 (92)
T 2lqo_A 1 MVTAALTIYT-TSWCGYC-LRLKTALTA-NRIAYDEVDIE 37 (92)
T ss_dssp CCSSCEEEEE-CTTCSSH-HHHHHHHHH-TTCCCEEEETT
T ss_pred CCCCcEEEEc-CCCCHhH-HHHHHHHHh-cCCceEEEEcC
Confidence 44 4455555 3699999 678888887 48887777765
No 54
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=74.29 E-value=2.7 Score=23.59 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=21.1
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEec
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADL 38 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~ 38 (86)
|.+++|-- .-.|+.| .+++..|..+ |+.--.+|.
T Consensus 11 M~~v~ly~-~~~Cp~C-~~~~~~L~~~-gi~~~~~~v 44 (92)
T 3ic4_A 11 MAEVLMYG-LSTCPHC-KRTLEFLKRE-GVDFEVIWI 44 (92)
T ss_dssp CSSSEEEE-CTTCHHH-HHHHHHHHHH-TCCCEEEEG
T ss_pred CceEEEEE-CCCChHH-HHHHHHHHHc-CCCcEEEEe
Confidence 33344443 3589999 6788888876 665434443
No 55
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=72.11 E-value=15 Score=22.93 Aligned_cols=60 Identities=15% Similarity=-0.022 Sum_probs=45.8
Q ss_pred ceEEEEEEeecccH-hHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhh
Q 036889 2 ARMVVLKMMTMNDE-KTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKI 61 (86)
Q Consensus 2 ~~~vvlkV~~m~C~-~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~ 61 (86)
.+-++|.|.++.-. -+...|+.+++....|..|++.....+.-|...-++..-.+++++.
T Consensus 16 ~~G~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 16 KIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred cCCeEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 34568889888887 7899999999998889999988777776666644355666677764
No 56
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=71.69 E-value=8.3 Score=23.66 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=33.3
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
-.|+.| +++++.|.. .||.--.+|.... ..+.++|...+...|.
T Consensus 13 p~C~~c-~ka~~~L~~-~gi~~~~~di~~~------~~~~~eL~~~l~~~g~ 56 (121)
T 3rdw_A 13 PRCSKS-RETLALVEQ-QGITPQVVLYLET------PPSVDKLKELLQQLGF 56 (121)
T ss_dssp TTCHHH-HHHHHHHHT-TTCCCEEECTTTS------CCCHHHHHHHHHHTTC
T ss_pred CCCHHH-HHHHHHHHH-cCCCcEEEeeccC------CCcHHHHHHHHHhcCC
Confidence 589999 777888876 5887666776543 2678889888888874
No 57
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=70.05 E-value=8 Score=20.84 Aligned_cols=26 Identities=12% Similarity=0.080 Sum_probs=18.9
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
-.|+.| .+++..|..+ |+.-..+|..
T Consensus 9 ~~C~~C-~~~~~~l~~~-~i~~~~vdi~ 34 (81)
T 1h75_A 9 NDCVQC-HATKRAMENR-GFDFEMINVD 34 (81)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEETT
T ss_pred CCChhH-HHHHHHHHHC-CCCeEEEECC
Confidence 489999 6688888875 6766555554
No 58
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=69.93 E-value=13 Score=21.23 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=39.0
Q ss_pred eEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 3 RMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
...+|.+.|+.|+.=.-+++++|.+++- .+.+.|..+ .....|...++..||.
T Consensus 9 ~~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 9 PDHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp CSEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 4567888899999999999999999852 123344333 4456788888899984
No 59
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=69.64 E-value=8.5 Score=20.19 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=19.2
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
-.|+.| .+++..|..+ |+.-..+|..
T Consensus 9 ~~C~~C-~~~~~~l~~~-~i~~~~~di~ 34 (75)
T 1r7h_A 9 PACVQC-TATKKALDRA-GLAYNTVDIS 34 (75)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEETT
T ss_pred CCChHH-HHHHHHHHHc-CCCcEEEECC
Confidence 589999 6788888876 6766566654
No 60
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=69.47 E-value=6.4 Score=23.67 Aligned_cols=55 Identities=15% Similarity=0.101 Sum_probs=39.1
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
|....+|.+.|+.|+.=.-+++++|.+++.=+ .+.|..+ ....+|-+.++..||.
T Consensus 24 m~~~~~LD~rGl~CP~PvlktkkaL~~l~~Ge---------~L~Vl~dd~~a~~dIp~~~~~~G~~ 80 (97)
T 1je3_A 24 IVPDYRLDMVGEPCPYPAVATLEAMPQLKKGE---------ILEVVSDCPQSINNIPLDARNHGYT 80 (97)
T ss_dssp CCEEEEECSBCCSSSSSTHHHHHHTTTCCSSC---------EEEEEEBCSSSSCHHHHHHHHHTCS
T ss_pred CCcCeEEeCCCCCCCHHHHHHHHHHHcCCCCC---------EEEEEECCcchHHHHHHHHHHCCCE
Confidence 33456788889999999999999999885322 2333332 3446788888899984
No 61
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=69.31 E-value=16 Score=21.87 Aligned_cols=52 Identities=17% Similarity=0.112 Sum_probs=39.1
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
..+|.+.|+.|+.=.-+++++|.+++. .+.+.|..+ ....+|.+.++..||.
T Consensus 26 ~~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~ 79 (98)
T 1jdq_A 26 TKTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHE 79 (98)
T ss_dssp CEEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 367899999999999999999999852 223444443 4457888888899984
No 62
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.91 E-value=8.5 Score=22.92 Aligned_cols=34 Identities=3% Similarity=-0.011 Sum_probs=24.8
Q ss_pred EEEEEeecccHhHHH-----HHHHHHhccCCccEEEEecCC
Q 036889 5 VVLKMMTMNDEKTKQ-----KAIEAAADIYGVDSITADLKE 40 (86)
Q Consensus 5 vvlkV~~m~C~~C~~-----kI~kal~~l~GV~~v~vd~~~ 40 (86)
++|-. --.|+.|.. ++++.|... ||.-..+|...
T Consensus 10 V~vy~-~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~ 48 (111)
T 2ct6_A 10 IRVFI-ASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM 48 (111)
T ss_dssp EEEEE-CSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT
T ss_pred EEEEE-cCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC
Confidence 44444 358999986 899999885 78777777654
No 63
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=68.17 E-value=6.6 Score=26.47 Aligned_cols=55 Identities=15% Similarity=0.021 Sum_probs=37.9
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCH--HHHHHHHHhhCC
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDA--VAIAKKLKKIGK 63 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~--~~l~~~l~k~G~ 63 (86)
.+++-|.---|..|+..|..+|..-+||..|-+-... -+.-+| ..-++.|+.+|-
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d-----~~~~~p~~~~g~~~L~~aGI 140 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRL-----FMWEEPEIQAALKKLKEAGC 140 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeec-----CCcCChHHHHHHHHHHHCCC
Confidence 3567776567999999999999999999987653210 000122 356677888885
No 64
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=67.62 E-value=17 Score=22.15 Aligned_cols=48 Identities=10% Similarity=0.044 Sum_probs=35.1
Q ss_pred EEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 6 VLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 6 vlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+|.. -.|+.| +++++.|.. .||.--.+|...+ ..+.++|...+.+.|.
T Consensus 8 iY~~--p~C~~c-~ka~~~L~~-~gi~~~~~di~~~------~~~~~eL~~~l~~~g~ 55 (120)
T 3gkx_A 8 FLQY--PACSTC-QKAKKWLIE-NNIEYTNRLIVDD------NPTVEELKAWIPLSGL 55 (120)
T ss_dssp EEEC--TTCHHH-HHHHHHHHH-TTCCCEEEETTTT------CCCHHHHHHHHHHHTS
T ss_pred EEEC--CCChHH-HHHHHHHHH-cCCceEEEecccC------cCCHHHHHHHHHHcCC
Confidence 4444 589999 777888876 5887766776543 2678889888888873
No 65
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=66.40 E-value=17 Score=21.17 Aligned_cols=49 Identities=14% Similarity=0.167 Sum_probs=36.4
Q ss_pred EEEEeecccHhHHHHHHHHHhcc--CCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 6 VLKMMTMNDEKTKQKAIEAAADI--YGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 6 vlkV~~m~C~~C~~kI~kal~~l--~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
+|.+.|+.|+.=.-+++++|.++ +| +.+.|..+ ....+|...++..||.
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~ 55 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQ 55 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCE
Confidence 47777999999999999999998 34 23344332 4456788888889984
No 66
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=66.33 E-value=26 Score=23.27 Aligned_cols=54 Identities=17% Similarity=0.040 Sum_probs=38.4
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCC---------------EEEEEEe---CCHHHHHHHHHh
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQ---------------KLIIIGD---MDAVAIAKKLKK 60 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~---------------~vtV~g~---vd~~~l~~~l~k 60 (86)
|+++++|- +-|==|. +..+.+++||.++.+-...| -|.|..+ ++-++|++..-.
T Consensus 1 Mte~A~fa---gGCFWg~---E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 1 MTKRAVLA---GGCFWGM---QDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp -CEEEEEE---ESCHHHH---HHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred CceEEEEE---ccCccch---HHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 77777764 4577774 55567889999999866554 5777776 788888887654
No 67
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=65.98 E-value=11 Score=23.73 Aligned_cols=53 Identities=11% Similarity=0.188 Sum_probs=35.0
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
|+..++|.. -.|+.| .++++.|.. .||.--.+|....- .+.++|...+.+.|.
T Consensus 1 M~~itiY~~--p~C~~c-rkak~~L~~-~gi~~~~idi~~~~------~~~~eL~~~~~~~g~ 53 (141)
T 1s3c_A 1 MSNITIYHN--PASGTS-RNTLEMIRN-SGTEPTIILYLENP------PSRDELVKLIADMGI 53 (141)
T ss_dssp --CCEEECC--TTCHHH-HHHHHHHHH-TTCCCEEECTTTSC------CCHHHHHHHHHHHTS
T ss_pred CCcEEEEEC--CCChHH-HHHHHHHHH-cCCCEEEEECCCCC------ccHHHHHHHhcccCC
Confidence 443334444 599999 788888877 58887677765432 566777777777664
No 68
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=64.14 E-value=6.2 Score=21.41 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=18.0
Q ss_pred cccHhHHHHHHHHHhcc----CCccEEEEec
Q 036889 12 MNDEKTKQKAIEAAADI----YGVDSITADL 38 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l----~GV~~v~vd~ 38 (86)
-.|+.| .+++..|..+ +|+.-..+|.
T Consensus 9 ~~C~~C-~~~~~~l~~l~~~~~~i~~~~vdi 38 (85)
T 1ego_A 9 SGCPYC-VRAKDLAEKLSNERDDFQYQYVDI 38 (85)
T ss_dssp TTSTHH-HHHHHHHHHHHHHHSSCEEEEECH
T ss_pred CCCCCH-HHHHHHHHHHHhcCCCceEEEEec
Confidence 589999 5566777764 5766666654
No 69
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=60.13 E-value=14 Score=22.28 Aligned_cols=27 Identities=4% Similarity=-0.057 Sum_probs=19.2
Q ss_pred cccHhHHHHHHHHHhcc---CCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADI---YGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l---~GV~~v~vd~~ 39 (86)
-.|.-| ..++..|..+ .|+.-..+|.+
T Consensus 38 ~~C~~C-~~a~~~L~~l~~e~~i~~~~vDId 67 (107)
T 2fgx_A 38 EGCHLC-EEMIASLRVLQKKSWFELEVINID 67 (107)
T ss_dssp SSCHHH-HHHHHHHHHHHHHSCCCCEEEETT
T ss_pred CCChhH-HHHHHHHHHHHHhcCCeEEEEECC
Confidence 489999 6777777764 46766666654
No 70
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=58.36 E-value=15 Score=22.23 Aligned_cols=44 Identities=27% Similarity=0.280 Sum_probs=29.6
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
-.|..| .++++.|... ||.--.+|...+ ..+.+.+.+.+++.|.
T Consensus 13 ~~C~~C-~ka~~~L~~~-gi~y~~~di~~~------~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 13 KNCDTM-KKARIWLEDH-GIDYTFHDYKKE------GLDAETLDRFLKTVPW 56 (120)
T ss_dssp SSCHHH-HHHHHHHHHH-TCCEEEEEHHHH------CCCHHHHHHHHHHSCG
T ss_pred CCChHH-HHHHHHHHHc-CCcEEEEeeeCC------CCCHHHHHHHHHHcCh
Confidence 589999 7888888774 887655555321 1445677666666673
No 71
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=57.91 E-value=21 Score=19.58 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=35.6
Q ss_pred CceEEEEEEeecccHhHH----HHHHHHHhccCCccEEEEecC--------CCEEEEEEeCCHHHHHHHHH
Q 036889 1 MARMVVLKMMTMNDEKTK----QKAIEAAADIYGVDSITADLK--------EQKLIIIGDMDAVAIAKKLK 59 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~----~kI~kal~~l~GV~~v~vd~~--------~~~vtV~g~vd~~~l~~~l~ 59 (86)
|-.+..|.|| -..-++. .+..+.|....|+ .+.++.. .+.+++.|+ ++.+..|.+
T Consensus 1 ~~~~~~i~Ip-~~~vg~IIGkgG~~Ik~I~~~tga-~I~i~~~~~~~~~~~~~~v~I~G~--~~~v~~A~~ 67 (76)
T 1dtj_A 1 MKELVEMAVP-ENLVGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGS--PAATQAAQY 67 (76)
T ss_dssp CCEEEEEEEE-TTTHHHHHCSTTHHHHHHHHHHCC-EEEECCTTCCSTTCCEEEEEEEES--HHHHHHHHH
T ss_pred CceEEEEEEC-hHHcceEECCCchHHHHHHHHhCC-EEEECcCCCCCCCCceeEEEEEeC--HHHHHHHHH
Confidence 5567788886 4555554 3445566676787 4777754 258999996 666666654
No 72
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=57.31 E-value=5.8 Score=24.92 Aligned_cols=51 Identities=4% Similarity=0.065 Sum_probs=28.6
Q ss_pred HHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHH----Hhh-C-C--eEEEEcCCCCC
Q 036889 24 AAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKL----KKI-G-K--IEIVSVGPAKA 74 (86)
Q Consensus 24 al~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l----~k~-G-~--a~ivsv~~~~~ 74 (86)
+|..+..+..++++.+.+.||++|.++...-.+.+ +.+ | + ..-+.+.|..|
T Consensus 69 aL~~~~~l~~i~V~V~~g~VtLsG~v~s~~~r~~a~~~a~~~pgv~~V~n~i~V~~~~p 127 (132)
T 2kgs_A 69 VFTASVPIPDFGLKVERDTVTLTGTAPSSEHKDAVKRAATSTWPDMKIVNNIEVTGQAP 127 (132)
T ss_dssp HHHHHTTCTTCEEEEEETEEEEECEESSHHHHHHHHHHHHHHCTTSEEEECCEECCCCC
T ss_pred HHHhcCcCCceEEEEECCEEEEEEEECCHHHHHHHHHHHHhCCCceEEEEeEEECCCCC
Confidence 44443333466777778999999986555333333 333 3 4 33355555544
No 73
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=57.07 E-value=18 Score=19.52 Aligned_cols=27 Identities=4% Similarity=-0.127 Sum_probs=17.9
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCcc
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVD 32 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~ 32 (86)
|+-+.|.- -.|+.| .+++..|..+ |+.
T Consensus 4 m~v~ly~~--~~Cp~C-~~~~~~L~~~-~i~ 30 (89)
T 3msz_A 4 MKVKIYTR--NGCPYC-VWAKQWFEEN-NIA 30 (89)
T ss_dssp CCEEEEEC--TTCHHH-HHHHHHHHHT-TCC
T ss_pred eEEEEEEc--CCChhH-HHHHHHHHHc-CCC
Confidence 44334433 589999 6788888875 554
No 74
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=55.47 E-value=12 Score=21.41 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=19.9
Q ss_pred ccCCcc--EEEEecCCCEEEEEEeCC
Q 036889 27 DIYGVD--SITADLKEQKLIIIGDMD 50 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~vd 50 (86)
.++|+. .++|...++.++|.|.-.
T Consensus 14 dlPG~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp ECTTTCCSEEEEEEETTEEEEEEEEC
T ss_pred ECCCCChHHEEEEEECCEEEEEEEEc
Confidence 578875 689999999999999743
No 75
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.24 E-value=19 Score=23.71 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=23.9
Q ss_pred EEEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 34 ITADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 34 v~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
.++|..++++.|.|.+++.+|.+.|++
T Consensus 72 g~id~~~~rlii~G~~~~~~i~~~L~~ 98 (157)
T 2e9h_A 72 TQFDVKNDRYIVNGSHEANKLQDMLDG 98 (157)
T ss_dssp EEEETTTTEEEEEBCCCHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 478888999999999999999998875
No 76
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=55.23 E-value=21 Score=21.39 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=18.6
Q ss_pred HHHHHHHHHhccCCccEEEEe
Q 036889 17 TKQKAIEAAADIYGVDSITAD 37 (86)
Q Consensus 17 C~~kI~kal~~l~GV~~v~vd 37 (86)
-...+..++++++||.|+++.
T Consensus 66 ~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 66 SFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp CHHHHHHHHHHSTTEEEEEEE
T ss_pred ccHHHHHHHhcCCCceEEEEE
Confidence 489999999999999999874
No 77
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=53.91 E-value=26 Score=19.32 Aligned_cols=25 Identities=4% Similarity=-0.222 Sum_probs=19.5
Q ss_pred ccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 13 NDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 13 ~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
.|+.| .++++.|... ||.--.+|..
T Consensus 13 ~Cp~C-~~ak~~L~~~-gi~y~~idI~ 37 (87)
T 1aba_A 13 KCGPC-DNAKRLLTVK-KQPFEFINIM 37 (87)
T ss_dssp CCHHH-HHHHHHHHHT-TCCEEEEESC
T ss_pred cCccH-HHHHHHHHHc-CCCEEEEEee
Confidence 89999 7788888875 7876666654
No 78
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=53.35 E-value=35 Score=20.67 Aligned_cols=48 Identities=19% Similarity=0.136 Sum_probs=35.1
Q ss_pred EEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 6 VLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 6 vlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+|.. -.|+.| +++++.|.. .||.--.+|.... ..+.++|...+.+.|.
T Consensus 7 iY~~--~~C~~c-~ka~~~L~~-~gi~~~~~di~~~------~~~~~eL~~~l~~~g~ 54 (120)
T 3fz4_A 7 FYEY--PKCSTC-RRAKAELDD-LAWDYDAIDIKKN------PPAASLIRNWLENSGL 54 (120)
T ss_dssp EEEC--SSCHHH-HHHHHHHHH-HTCCEEEEETTTS------CCCHHHHHHHHHHSCC
T ss_pred EEeC--CCChHH-HHHHHHHHH-cCCceEEEEeccC------chhHHHHHHHHHHcCC
Confidence 3444 589999 777788876 4888766776543 2678889888888873
No 79
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=53.14 E-value=46 Score=21.92 Aligned_cols=45 Identities=7% Similarity=0.176 Sum_probs=35.6
Q ss_pred HHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHH-----hhCC
Q 036889 18 KQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLK-----KIGK 63 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~-----k~G~ 63 (86)
...++..|..+ |-+.|..=+++|.|.+..+.++..|...|+ ..|+
T Consensus 24 MadLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~ 73 (183)
T 2hiy_A 24 MAELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPF 73 (183)
T ss_dssp HHHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCC
Confidence 45677888887 999999999999999998778666665554 2576
No 80
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=52.87 E-value=15 Score=19.42 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=20.5
Q ss_pred CceEEEEEEeecccHhHHHHH---HHHHhccC-CccEEEEecCC
Q 036889 1 MARMVVLKMMTMNDEKTKQKA---IEAAADIY-GVDSITADLKE 40 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI---~kal~~l~-GV~~v~vd~~~ 40 (86)
||-++++-- .-.|+.|..-. .+.....+ ++.-+.+|.+.
T Consensus 1 mm~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 43 (85)
T 1nho_A 1 MVVNIEVFT-SPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV 43 (85)
T ss_dssp CCCCEEEES-CSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT
T ss_pred CeEEEEEEE-CCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 565444444 46899994332 23223333 46666666543
No 81
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=52.34 E-value=18 Score=23.74 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=27.0
Q ss_pred ccCCccEEEEecCCCEEEEEEe-CCHHHHHHHH
Q 036889 27 DIYGVDSITADLKEQKLIIIGD-MDAVAIAKKL 58 (86)
Q Consensus 27 ~l~GV~~v~vd~~~~~vtV~g~-vd~~~l~~~l 58 (86)
++|||+.+..|+.+.+|+=.-+ +|-..+.+.|
T Consensus 119 aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 119 AIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECHHHHHHHH
T ss_pred ecCceEEEeecCCccchhhhHhHHhHHHHHHHh
Confidence 6899999999999999998766 7877776655
No 82
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=51.09 E-value=29 Score=20.13 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=21.1
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKE 40 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~ 40 (86)
-.|+.| .+++..|..+ ||.-..+|...
T Consensus 28 ~~Cp~C-~~ak~~L~~~-~i~~~~vdi~~ 54 (109)
T 1wik_A 28 AKCGFS-KQILEILNST-GVEYETFDILE 54 (109)
T ss_dssp CCSSTH-HHHHHHHHHT-CSCEEEEESSS
T ss_pred CCCchH-HHHHHHHHHc-CCCeEEEECCC
Confidence 589999 6788889886 78776677653
No 83
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=48.74 E-value=38 Score=22.31 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=25.0
Q ss_pred CCccEEEEecCCCEEEEEEe-CCHHHHHHHHHhhC
Q 036889 29 YGVDSITADLKEQKLIIIGD-MDAVAIAKKLKKIG 62 (86)
Q Consensus 29 ~GV~~v~vd~~~~~vtV~g~-vd~~~l~~~l~k~G 62 (86)
.||.+-.||+.+|+|+|+.+ -.+......++.+|
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG 148 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSG 148 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHT
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhC
Confidence 46889999999999999986 33444444445677
No 84
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=46.68 E-value=14 Score=21.26 Aligned_cols=22 Identities=9% Similarity=0.226 Sum_probs=18.3
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.++|+. .++|....+.++|.|.
T Consensus 13 dlPG~~~edi~V~v~~~~L~I~g~ 36 (90)
T 2y1y_A 13 DVKHFSPEELKVKVLGDVIEVHGK 36 (90)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEE
Confidence 578875 5888888999999996
No 85
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=46.55 E-value=32 Score=19.86 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=22.4
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
+++-- .-.|+.| .++++.|..+ ||.-..+|..
T Consensus 18 v~vy~-~~~Cp~C-~~ak~~L~~~-~i~y~~idI~ 49 (99)
T 3qmx_A 18 IEIYT-WSTCPFC-MRALALLKRK-GVEFQEYCID 49 (99)
T ss_dssp EEEEE-CTTCHHH-HHHHHHHHHH-TCCCEEEECT
T ss_pred EEEEE-cCCChhH-HHHHHHHHHC-CCCCEEEEcC
Confidence 44444 3689999 7888888886 6766556654
No 86
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=45.60 E-value=11 Score=21.89 Aligned_cols=22 Identities=32% Similarity=0.582 Sum_probs=18.4
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.+||+. +++|+..++.++|.|.
T Consensus 21 ~lPG~~~edi~v~~~~~~L~I~g~ 44 (100)
T 3gla_A 21 DLPGIDPSQIEVQMDKGILSIRGE 44 (100)
T ss_dssp ECTTSCGGGCEEEEETTEEEEEEE
T ss_pred ECCCCCHHHEEEEEECCEEEEEEE
Confidence 578876 5888888999999997
No 87
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=44.67 E-value=34 Score=18.02 Aligned_cols=26 Identities=12% Similarity=0.010 Sum_probs=18.5
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
-.|+.| .+++..|... |+.-..+|..
T Consensus 9 ~~C~~C-~~~~~~l~~~-~i~~~~~~i~ 34 (82)
T 1fov_A 9 ETCPYC-HRAKALLSSK-GVSFQELPID 34 (82)
T ss_dssp SSCHHH-HHHHHHHHHH-TCCCEEEECT
T ss_pred CCChhH-HHHHHHHHHC-CCCcEEEECC
Confidence 589999 6788888775 6665555544
No 88
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=44.09 E-value=20 Score=21.78 Aligned_cols=44 Identities=9% Similarity=0.180 Sum_probs=32.1
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
-.|+.| +++++.|.. .|+.--.+|.... ..+.++|...+.+.|.
T Consensus 12 p~C~~c-~ka~~~L~~-~gi~~~~~di~~~------~~t~~eL~~~l~~~g~ 55 (119)
T 3f0i_A 12 PKCSKS-RETLALLEN-QGIAPQVIKYLET------SPSVEELKRLYQQLGL 55 (119)
T ss_dssp TTCHHH-HHHHHHHHH-TTCCCEEECHHHH------CCCHHHHHHHHHHHTC
T ss_pred CCChHH-HHHHHHHHH-cCCceEEEEeccC------cCcHHHHHHHHHHcCC
Confidence 589999 777888877 5887655554321 2788899888888873
No 89
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=43.96 E-value=38 Score=27.72 Aligned_cols=44 Identities=9% Similarity=0.061 Sum_probs=35.0
Q ss_pred HHHHHHHHhccCCccEEEEecCCCEEEEEEe--------CCHHHHHHHHHhh
Q 036889 18 KQKAIEAAADIYGVDSITADLKEQKLIIIGD--------MDAVAIAKKLKKI 61 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--------vd~~~l~~~l~k~ 61 (86)
...++..|.+++||.+|.++....++.|.-+ +++.+|.++|+..
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~ 210 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQ 210 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhc
Confidence 3579999999999999999864556666632 7888999999853
No 90
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=43.47 E-value=17 Score=21.50 Aligned_cols=22 Identities=9% Similarity=0.187 Sum_probs=18.4
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.++|+. +++++..++.++|.|.
T Consensus 18 dlPG~~~edI~V~v~~~~L~I~g~ 41 (101)
T 2wj5_A 18 DVKHFSPEEISVKVVGDHVEVHAR 41 (101)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEE
Confidence 578875 5888888999999996
No 91
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=42.58 E-value=27 Score=23.28 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=23.2
Q ss_pred EEEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 34 ITADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 34 v~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
.++|..++++.|.|.+++..|.+.|++
T Consensus 65 g~id~~~~rliinG~~~~~~i~~~L~~ 91 (170)
T 2g2k_A 65 TQFDVKNDRYIVNGSHEANKLQDMLDG 91 (170)
T ss_dssp CEECTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 367877899999999999999888864
No 92
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=42.51 E-value=13 Score=21.85 Aligned_cols=23 Identities=26% Similarity=0.472 Sum_probs=19.1
Q ss_pred ccCCcc--EEEEecCCCEEEEEEeC
Q 036889 27 DIYGVD--SITADLKEQKLIIIGDM 49 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~v 49 (86)
.|||+. +++++..++.++|.|.-
T Consensus 23 ~lPG~~~edi~v~~~~~~L~I~g~~ 47 (102)
T 4fei_A 23 DVPGVDAGTLALAEDGGQLTVSGER 47 (102)
T ss_dssp ECTTCCGGGCEEEEETTEEEEEEEE
T ss_pred ECCCCchHhEEEEEECCEEEEEEEE
Confidence 578876 58888889999999974
No 93
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=42.23 E-value=23 Score=23.07 Aligned_cols=24 Identities=33% Similarity=0.555 Sum_probs=21.5
Q ss_pred EEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 35 TADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 35 ~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
++| ++++.|.|.+++.+|.+.|++
T Consensus 76 ~id--~~rlii~G~~~~~~i~~~L~~ 99 (148)
T 2d74_B 76 TLE--GRRVVLQGRFTPYLIANKLKK 99 (148)
T ss_dssp EEE--TTEEEESSCCCHHHHHHHHHH
T ss_pred eec--CCEEEEEeeeCHHHHHHHHHH
Confidence 566 899999999999999999986
No 94
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=41.47 E-value=44 Score=27.29 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=34.3
Q ss_pred HHHHHHHHhccCCccEEEEecCCCEEEEEE--------eCCHHHHHHHHHh
Q 036889 18 KQKAIEAAADIYGVDSITADLKEQKLIIIG--------DMDAVAIAKKLKK 60 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v~vd~~~~~vtV~g--------~vd~~~l~~~l~k 60 (86)
...++..|.+++||.+|.+.....++.|.- .+++.++.++|+.
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 368999999999999999966644566653 2788889999986
No 95
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=40.92 E-value=35 Score=24.09 Aligned_cols=45 Identities=16% Similarity=0.108 Sum_probs=32.8
Q ss_pred hHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhh-C
Q 036889 16 KTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKI-G 62 (86)
Q Consensus 16 ~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~-G 62 (86)
...++|+++|.. +++..-.+....+++.|.++ |++.++++|.++ |
T Consensus 25 ~L~~nI~~~L~~-~~~~~~~v~~~~gri~V~~~-~~~~~~~~L~~vfG 70 (307)
T 1vbk_A 25 ILMNNIREALVT-EEVPYKEIFSRHGRIIVKTN-SPKEAANVLVRVFG 70 (307)
T ss_dssp HHHHHHHHHHHH-TTCCCSEEEEETTEEEEECS-CHHHHHHHHTTSTT
T ss_pred HHHHHHHHHhcc-cCccceeEEEECCEEEEEcC-CHHHHHHHHhhcCC
Confidence 367889999988 66652124455689999865 888888998875 6
No 96
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=40.55 E-value=44 Score=18.09 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=7.3
Q ss_pred HHHHHHHhccCCccEE
Q 036889 19 QKAIEAAADIYGVDSI 34 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v 34 (86)
..+...|.+++||.+|
T Consensus 60 ~~l~~~L~~~~~V~~v 75 (88)
T 2ko1_A 60 TTLMDKLRKVQGVFTV 75 (88)
T ss_dssp HHHHHHHTTCTTEEEE
T ss_pred HHHHHHHhcCCCceEE
Confidence 3444444444444443
No 97
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=40.39 E-value=20 Score=21.40 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.4
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.++|+. .++|...++.++|.|.
T Consensus 19 dlPG~~~edi~V~v~~~~L~I~g~ 42 (106)
T 3l1e_A 19 DVKHFSPEDLTVKVQEDFVEIHGK 42 (106)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCChHHEEEEEECCEEEEEEE
Confidence 578875 5888888999999995
No 98
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=39.99 E-value=42 Score=19.81 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=27.4
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHh-hCC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKK-IGK 63 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G~ 63 (86)
-.|+.| .++++.|... ||.-..+|... |+ .+.+.|.+ +|+
T Consensus 29 ~~Cp~C-~~ak~~L~~~-gi~y~~~di~~---------d~-~~~~~l~~~~g~ 69 (111)
T 3zyw_A 29 PRCGFS-KQMVEILHKH-NIQFSSFDIFS---------DE-EVRQGLKAYSSW 69 (111)
T ss_dssp BSSHHH-HHHHHHHHHT-TCCCEEEEGGG---------CH-HHHHHHHHHHTC
T ss_pred CcchhH-HHHHHHHHHc-CCCeEEEECcC---------CH-HHHHHHHHHHCC
Confidence 589999 7788889875 88766666543 33 45566654 464
No 99
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=39.58 E-value=20 Score=21.30 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=19.7
Q ss_pred HhHHHHHHHHHhccCCccEEEEe
Q 036889 15 EKTKQKAIEAAADIYGVDSITAD 37 (86)
Q Consensus 15 ~~C~~kI~kal~~l~GV~~v~vd 37 (86)
.+-...+..++++++||.|+++-
T Consensus 61 ~~~td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 61 EGGTEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp CGGGGHHHHHHTTSCSSEEEEEE
T ss_pred CcChHHHHHHHhccCCccEEEEE
Confidence 45678899999999999999874
No 100
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=39.08 E-value=11 Score=21.56 Aligned_cols=18 Identities=11% Similarity=-0.014 Sum_probs=15.5
Q ss_pred ecccHhHHHHHHHHHhcc
Q 036889 11 TMNDEKTKQKAIEAAADI 28 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l 28 (86)
++.|++|...|++.|...
T Consensus 35 Gt~CG~C~~~i~~il~~~ 52 (73)
T 4e6k_G 35 GTQCGKCASLAKQVVRET 52 (73)
T ss_dssp TSSSCTTHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHH
Confidence 678999999999998864
No 101
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=38.70 E-value=32 Score=19.68 Aligned_cols=26 Identities=19% Similarity=0.184 Sum_probs=19.5
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
-.|+.| .+++..|..+ ||.-..+|..
T Consensus 30 ~~C~~C-~~~~~~L~~~-~i~~~~vdi~ 55 (105)
T 2yan_A 30 AKCGFS-KQILEILNST-GVEYETFDIL 55 (105)
T ss_dssp BCTTHH-HHHHHHHHHH-TCCCEEEEGG
T ss_pred CCCccH-HHHHHHHHHC-CCCeEEEECC
Confidence 589999 6788888886 6765556554
No 102
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=38.30 E-value=39 Score=20.99 Aligned_cols=26 Identities=19% Similarity=0.102 Sum_probs=20.0
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~ 39 (86)
-.|+.| .++++.|..+ ||.-..+|..
T Consensus 48 ~~Cp~C-~~ak~~L~~~-gv~y~~vdI~ 73 (135)
T 2wci_A 48 PSCGFS-AQAVQALAAC-GERFAYVDIL 73 (135)
T ss_dssp BSSHHH-HHHHHHHHTT-CSCCEEEEGG
T ss_pred CCCccH-HHHHHHHHHc-CCceEEEECC
Confidence 479999 6789999886 7876666654
No 103
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=37.49 E-value=45 Score=19.48 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=31.4
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHH-hhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLK-KIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~-k~G~ 63 (86)
+++-. --.|+.| .+++..|.++ |+.--.+|... .-|...+.+.|. ..|+
T Consensus 19 v~vy~-~~~Cp~C-~~ak~~L~~~-~i~~~~~dvd~-------~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 19 VVIFS-KSYCPHS-TRVKELFSSL-GVECNVLELDQ-------VDDGARVQEVLSEITNQ 68 (114)
T ss_dssp EEEEE-CTTCHHH-HHHHHHHHHT-TCCCEEEETTT-------STTHHHHHHHHHHHHSC
T ss_pred EEEEE-cCCCCcH-HHHHHHHHHc-CCCcEEEEecC-------CCChHHHHHHHHHHhCC
Confidence 44444 3689999 7889999886 77654455432 125567777774 4564
No 104
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=37.46 E-value=45 Score=17.35 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=16.7
Q ss_pred ecccHhHHHH---HHHHHhccC-CccEEEEecCC
Q 036889 11 TMNDEKTKQK---AIEAAADIY-GVDSITADLKE 40 (86)
Q Consensus 11 ~m~C~~C~~k---I~kal~~l~-GV~~v~vd~~~ 40 (86)
.-.|+.|..- +.+.....+ ++.-+.+|.+.
T Consensus 11 ~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 44 (85)
T 1fo5_A 11 SPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME 44 (85)
T ss_dssp CCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS
T ss_pred CCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC
Confidence 4689999532 233333444 56666666543
No 105
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=37.33 E-value=7.8 Score=21.79 Aligned_cols=51 Identities=10% Similarity=-0.046 Sum_probs=36.4
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHhhCCe
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k~G~a 64 (86)
.+|.+.|+.|+.=.-+++++|.+++.=+ .+.|..+ .....|-+.++..||.
T Consensus 7 ~~lD~rGl~CP~Pvl~~k~al~~l~~G~---------~L~V~~dd~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 7 RVIDARGSYCPGPLMELIKAYKQAKVGE---------VISVYSTDAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp CCCCBSSCSSCTTHHHHHHHHTTSCTTC---------CEECCBSSSCHHHHHHHHHHHHTEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHcCCCCC---------EEEEEECCccHHHHHHHHHHHCCCE
Confidence 4567779999999999999999885222 2333332 3356788888899984
No 106
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=37.26 E-value=68 Score=19.56 Aligned_cols=50 Identities=10% Similarity=0.112 Sum_probs=29.8
Q ss_pred EEEEEeecccHhHHHHHHHHHhccC--CccEEEEecCCCEEEEEEeCCHHHHHHHHHh-hCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIY--GVDSITADLKEQKLIIIGDMDAVAIAKKLKK-IGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~--GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G~ 63 (86)
|++-. --.|+.| .++++.|.+.. |+.--.+|... +.|...+.+.|.+ .|+
T Consensus 16 Vvvys-k~~Cp~C-~~ak~lL~~~~~~~v~~~~idid~-------~~d~~~~~~~l~~~~G~ 68 (127)
T 3l4n_A 16 IIIFS-KSTCSYS-KGMKELLENEYQFIPNYYIIELDK-------HGHGEELQEYIKLVTGR 68 (127)
T ss_dssp EEEEE-CTTCHHH-HHHHHHHHHHEEEESCCEEEEGGG-------STTHHHHHHHHHHHHSC
T ss_pred EEEEE-cCCCccH-HHHHHHHHHhcccCCCcEEEEecC-------CCCHHHHHHHHHHHcCC
Confidence 45555 3689999 78889998741 44333333321 1355677777764 463
No 107
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=37.25 E-value=58 Score=18.52 Aligned_cols=27 Identities=11% Similarity=-0.102 Sum_probs=18.5
Q ss_pred cccHhHHHHHHHHHhcc-CCccEEEEecC
Q 036889 12 MNDEKTKQKAIEAAADI-YGVDSITADLK 39 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l-~GV~~v~vd~~ 39 (86)
-.|+.| ..++..|..+ .++.-..+|.+
T Consensus 25 ~~C~~C-~~~~~~L~~l~~~i~~~~vdi~ 52 (100)
T 1wjk_A 25 APCPLC-DEAKEVLQPYKDRFILQEVDIT 52 (100)
T ss_dssp SSCHHH-HHHHHHTSTTSSSSEEEEEETT
T ss_pred CCCcch-HHHHHHHHHhhhCCeEEEEECC
Confidence 589999 6778888754 35655556654
No 108
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=37.14 E-value=18 Score=21.96 Aligned_cols=23 Identities=30% Similarity=0.498 Sum_probs=18.8
Q ss_pred ccCCcc--EEEEecCC-CEEEEEEeC
Q 036889 27 DIYGVD--SITADLKE-QKLIIIGDM 49 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~-~~vtV~g~v 49 (86)
.+||+. +++|...+ +.++|.|.-
T Consensus 41 ~lPG~~~edi~V~v~~~~~L~I~g~~ 66 (123)
T 3aab_A 41 DLAGFNKEKIKARVSGQNELIIEAER 66 (123)
T ss_dssp ECCSCCGGGCEEEEETTTEEEEEEEC
T ss_pred ECCCCCHHHEEEEEeCCCEEEEEEEE
Confidence 578885 58888888 999999974
No 109
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=36.85 E-value=31 Score=19.59 Aligned_cols=16 Identities=19% Similarity=0.115 Sum_probs=14.8
Q ss_pred CCHHHHHHHHHhhCCe
Q 036889 49 MDAVAIAKKLKKIGKI 64 (86)
Q Consensus 49 vd~~~l~~~l~k~G~a 64 (86)
+|++.|+++|...||.
T Consensus 61 id~d~l~~~L~~~g~~ 76 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYE 76 (81)
T ss_dssp CCHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHcCCE
Confidence 7999999999999994
No 110
>2e3u_A PH-DIM2P, hypothetical protein PH1566; PRE-ribosomal RNA processing factor, RNA binding protein; 2.30A {Pyrococcus horikoshii} PDB: 3aev_B
Probab=36.80 E-value=57 Score=22.18 Aligned_cols=40 Identities=18% Similarity=0.137 Sum_probs=28.4
Q ss_pred HHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHHH
Q 036889 19 QKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKLK 59 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l~ 59 (86)
.++.+.|..--|+. +++|.+++.|+|.+. -|++.+.+|..
T Consensus 53 Gk~Ik~I~e~tgvk-I~I~~~~g~V~I~~~~~t~d~~~i~kA~~ 95 (219)
T 2e3u_A 53 GQTKKEIEKRTKTK-ITIDSETGEVWITSTKETEDPLAVWKARD 95 (219)
T ss_dssp GHHHHHHHHHHTEE-EEECTTTCEEEEEECTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCcE-EEEEcCCCEEEEecCCCCCCHHHHHHHHH
Confidence 45566666656754 888888999999984 46777666554
No 111
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=36.65 E-value=28 Score=20.39 Aligned_cols=39 Identities=10% Similarity=0.090 Sum_probs=26.8
Q ss_pred ccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHh-hCC
Q 036889 13 NDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKK-IGK 63 (86)
Q Consensus 13 ~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G~ 63 (86)
.|+.| .++++.|... ||.-..+|... | ..+.+.|.+ .|+
T Consensus 32 ~Cp~C-~~ak~~L~~~-gi~~~~~dI~~---------~-~~~~~~l~~~~g~ 71 (109)
T 3ipz_A 32 MCGFS-NTVVQILKNL-NVPFEDVNILE---------N-EMLRQGLKEYSNW 71 (109)
T ss_dssp SSHHH-HHHHHHHHHT-TCCCEEEEGGG---------C-HHHHHHHHHHHTC
T ss_pred CChhH-HHHHHHHHHc-CCCcEEEECCC---------C-HHHHHHHHHHHCC
Confidence 79999 8889999886 88766666542 2 345666664 463
No 112
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=36.60 E-value=23 Score=22.52 Aligned_cols=22 Identities=23% Similarity=0.196 Sum_probs=18.6
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.|+|+. +|+|+..++.++|.|.
T Consensus 73 dlPG~~~edi~V~~~~~~L~I~g~ 96 (161)
T 4eld_A 73 WLPGVNKEDIILNAVGDTLEIRAK 96 (161)
T ss_dssp ECTTCCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCChHhEEEEEECCEEEEEEE
Confidence 578876 5888888999999996
No 113
>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1
Probab=36.58 E-value=58 Score=18.35 Aligned_cols=55 Identities=18% Similarity=0.209 Sum_probs=31.9
Q ss_pred CceEEEEEEeecccHhHH----HHHHHHHhccCCccEEEEecCC--------CEEEEEEeCCHHHHHHHHH
Q 036889 1 MARMVVLKMMTMNDEKTK----QKAIEAAADIYGVDSITADLKE--------QKLIIIGDMDAVAIAKKLK 59 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~----~kI~kal~~l~GV~~v~vd~~~--------~~vtV~g~vd~~~l~~~l~ 59 (86)
|-.++.|.||. ..-++. .+..+.|....|+ .+.++... ..|+|.|+ ++.+..|..
T Consensus 1 ~k~t~~i~IP~-~~vG~IIGkgG~~Ik~I~~~tga-~I~I~~~~~~~~g~~~r~v~I~G~--~~~v~~A~~ 67 (87)
T 1ec6_A 1 MKELVEIAVPE-NLVGAILGKGGKTLVEYQELTGA-RIQISKKGEFLPGTRNRRVTITGS--PAATQAAQY 67 (87)
T ss_dssp CCSEEEEEEEH-HHHHHHHCGGGHHHHHHHHHHCC-EEEECCTTCBSTTSCEEEEEEESS--HHHHHHHHH
T ss_pred CceEEEEEECh-HHcCeeECCCcHhHHHHHHHhCC-EEEEccCCCCCCCCCceEEEEEcC--HHHHHHHHH
Confidence 44567788863 333332 3344556666677 46776532 48999996 455544443
No 114
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=36.17 E-value=51 Score=20.06 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=22.1
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCc-cEEEE
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGV-DSITA 36 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV-~~v~v 36 (86)
||+.++.-|. +.-...++.||.++ |+ ..+++
T Consensus 2 ~MKkI~AIIr----p~kl~~Vk~AL~~~-G~d~g~Tv 33 (115)
T 3l7p_A 2 SMKKIEAIIR----SDKLEDLKAALVQS-GFIKGMTI 33 (115)
T ss_dssp -CEEEEEEEE----GGGHHHHHHHHHHH-TCGGGEEE
T ss_pred ceEEEEEEEC----HHHHHHHHHHHHHC-CCCccEEE
Confidence 7888887775 67778899999875 66 44433
No 115
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=36.02 E-value=31 Score=25.08 Aligned_cols=56 Identities=9% Similarity=0.272 Sum_probs=40.8
Q ss_pred EEEeecccHhHHHHHHHHHhccCCccEEEE---ecCCCEEEEEEeC---------C-HHHHHHHHHhhC
Q 036889 7 LKMMTMNDEKTKQKAIEAAADIYGVDSITA---DLKEQKLIIIGDM---------D-AVAIAKKLKKIG 62 (86)
Q Consensus 7 lkV~~m~C~~C~~kI~kal~~l~GV~~v~v---d~~~~~vtV~g~v---------d-~~~l~~~l~k~G 62 (86)
++|.|++-.--...|..+|++.--=-.|.| +....+|.|.|.+ + ...|+++|..+|
T Consensus 114 v~vaG~T~~e~~~~I~~~L~~~~~~P~V~V~v~~~~~~~V~V~GeV~~PG~y~l~~~~~tl~~ai~~AG 182 (359)
T 2j58_A 114 VQVAGKTVSQVRQDITSRLTTYIESPQVDVSIAAFRSQKVYVTGEVANSGKQAITNIPLTVMDAINAAG 182 (359)
T ss_dssp EECTTCCHHHHHHHHHHHHTTTSSSCCEEEEEEECCSCEEEEEESBSSCEEEECCSSCCBHHHHHHHTT
T ss_pred EEECCCCHHHHHHHHHHHHHHhccCCeEEEEEccCCceEEEEEceecCCeEEEeCCCCCcHHHHHHHcC
Confidence 677889999999999999986321112333 4556799999853 2 578999999886
No 116
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=35.98 E-value=37 Score=20.52 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=26.4
Q ss_pred ccHhHHHHHHHHHhccCCcc-EEEEecCCCEEEEEEeCCHHHHHHHHHh-hCC
Q 036889 13 NDEKTKQKAIEAAADIYGVD-SITADLKEQKLIIIGDMDAVAIAKKLKK-IGK 63 (86)
Q Consensus 13 ~C~~C~~kI~kal~~l~GV~-~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G~ 63 (86)
.|+.| .++++.|.++ ||. -..+|... | ..+.+.|++ +|+
T Consensus 34 ~Cp~C-~~ak~lL~~~-gv~~~~~vdV~~---------d-~~~~~~l~~~tg~ 74 (118)
T 2wem_A 34 QCGFS-NAVVQILRLH-GVRDYAAYNVLD---------D-PELRQGIKDYSNW 74 (118)
T ss_dssp SSHHH-HHHHHHHHHT-TCCCCEEEESSS---------C-HHHHHHHHHHHTC
T ss_pred ccHHH-HHHHHHHHHc-CCCCCEEEEcCC---------C-HHHHHHHHHHhCC
Confidence 79999 7899999886 884 55566542 3 355566664 463
No 117
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=34.64 E-value=65 Score=18.95 Aligned_cols=32 Identities=3% Similarity=-0.053 Sum_probs=20.6
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCC---ccEEEEec
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYG---VDSITADL 38 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~G---V~~v~vd~ 38 (86)
+++-. .-.|+.|...++..|..+ | +.-..+|.
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~L~~~-~~~~i~~~~vdi 61 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTLFEKL-KVPRSKVLVLQL 61 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHTTS-CCCGGGEEEEEG
T ss_pred EEEEE-cCCCcCHHHHHHHHHHHc-CCCCCCeEEEEC
Confidence 44444 358999965548888876 5 55545554
No 118
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=34.11 E-value=71 Score=18.64 Aligned_cols=35 Identities=11% Similarity=0.050 Sum_probs=20.5
Q ss_pred EEEEEeecccHhHHHHH------HHHHhccCCccEEEEecC
Q 036889 5 VVLKMMTMNDEKTKQKA------IEAAADIYGVDSITADLK 39 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI------~kal~~l~GV~~v~vd~~ 39 (86)
+++..-.-.|+.|..-. .+....++|+.-+.+|..
T Consensus 34 vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 34444456799997633 233334567777777664
No 119
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=33.91 E-value=65 Score=19.43 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=28.9
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCC---ccEEEEecCCCEEEEEEeCCHHHHHHHHH-hhCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYG---VDSITADLKEQKLIIIGDMDAVAIAKKLK-KIGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~G---V~~v~vd~~~~~vtV~g~vd~~~l~~~l~-k~G~ 63 (86)
+++-. .-.|+.|...++..|..+ | +.-..+|.... -+-..+.+.|. ..|+
T Consensus 39 Vvvy~-~~~Cp~C~~a~k~~L~~~-~~~~i~~~~vdvd~~-------~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKATLSTLFQEL-NVPKSKALVLELDEM-------SNGSEIQDALEEISGQ 92 (129)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHTTS-CCCGGGEEEEEGGGS-------TTHHHHHHHHHHHHSC
T ss_pred EEEEE-CCCCCchHHHHHHHHHhc-CccCCCcEEEEcccc-------CCHHHHHHHHHHHhCC
Confidence 44444 368999965559999886 5 55444443221 12245566666 3564
No 120
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=33.57 E-value=73 Score=19.76 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=29.3
Q ss_pred ccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 27 DIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 27 ~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+..|+.++++. .+|.+.|.|.=-++.+++++...|.
T Consensus 42 Rt~GiRqfEi~-n~G~fRI~gYk~se~~~~~f~slGm 77 (108)
T 1kaf_A 42 RTNGIRNFEIN-NNGNMRIFGYKMMEHHIQKFTDIGM 77 (108)
T ss_dssp EETTEEEEEEC-TTSEEEEEEESCCHHHHHHHHTTTC
T ss_pred ccCceeEEEEe-cCCcEEEEEecCCHHHHHHHHhcCc
Confidence 45799999986 4689999998556678899999995
No 121
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=33.47 E-value=76 Score=19.60 Aligned_cols=33 Identities=9% Similarity=0.075 Sum_probs=25.4
Q ss_pred EEEEEeecccHhHH-----HHHHHHHhccCCccEEEEecC
Q 036889 5 VVLKMMTMNDEKTK-----QKAIEAAADIYGVDSITADLK 39 (86)
Q Consensus 5 vvlkV~~m~C~~C~-----~kI~kal~~l~GV~~v~vd~~ 39 (86)
|++-. -..|+.|. .++++.|.+. ||.--++|..
T Consensus 2 V~vYt-t~~c~~c~~kk~c~~aK~lL~~k-gV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYI-ASSSGSTAIKKKQQDVLGFLEAN-KIGFEEKDIA 39 (121)
T ss_dssp EEEEE-CTTCSCHHHHHHHHHHHHHHHHT-TCCEEEEECT
T ss_pred EEEEe-cCCCCCccchHHHHHHHHHHHHC-CCceEEEECC
Confidence 44555 47899996 8999999874 8988777765
No 122
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=33.32 E-value=42 Score=20.18 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=18.7
Q ss_pred ccHhHHHHHHHHHhccCCcc---EEEEecC
Q 036889 13 NDEKTKQKAIEAAADIYGVD---SITADLK 39 (86)
Q Consensus 13 ~C~~C~~kI~kal~~l~GV~---~v~vd~~ 39 (86)
.|+.| .++++.|.+. ||. -..+|..
T Consensus 30 ~Cp~C-~~ak~lL~~~-gv~~~~~~~~dv~ 57 (121)
T 3gx8_A 30 KCGFS-RATIGLLGNQ-GVDPAKFAAYNVL 57 (121)
T ss_dssp CTTHH-HHHHHHHHHH-TBCGGGEEEEECT
T ss_pred CCccH-HHHHHHHHHc-CCCcceEEEEEec
Confidence 79999 7888889886 776 4455554
No 123
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=33.16 E-value=80 Score=18.89 Aligned_cols=43 Identities=12% Similarity=-0.052 Sum_probs=32.1
Q ss_pred cccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhC
Q 036889 12 MNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIG 62 (86)
Q Consensus 12 m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G 62 (86)
-.|+.| .++++.|.+ .||.--.+|...+ ..+.++|...+.+.|
T Consensus 8 ~~C~~c-~ka~~~L~~-~gi~~~~~di~~~------~~~~~el~~~l~~~~ 50 (120)
T 3l78_A 8 PSCTSC-RKARAWLNR-HDVVFQEHNIMTS------PLSRDELLKILSYTE 50 (120)
T ss_dssp SSCHHH-HHHHHHHHH-TTCCEEEEETTTS------CCCHHHHHHHHHHCS
T ss_pred CCCHHH-HHHHHHHHH-cCCCeEEEecccC------CCcHHHHHHHHhhcC
Confidence 589999 778888877 4888777776543 267788888887765
No 124
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=33.12 E-value=87 Score=21.25 Aligned_cols=47 Identities=11% Similarity=0.002 Sum_probs=31.7
Q ss_pred ecccHhHHHHHHHHHhccCCccEEEEecCCCE-------------------EEEEEe---CCHHHHHHHHHh
Q 036889 11 TMNDEKTKQKAIEAAADIYGVDSITADLKEQK-------------------LIIIGD---MDAVAIAKKLKK 60 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~-------------------vtV~g~---vd~~~l~~~l~k 60 (86)
++-|==|..+ .+.+++||.++.+-...+. |.|.++ ++-++|++..-+
T Consensus 49 agGCFWg~E~---~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 49 GMGCFWGAER---KFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp EESSHHHHHH---HHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ecCCeeeeHH---HHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4567777555 4667899999988655543 666665 666777776653
No 125
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=33.12 E-value=65 Score=17.88 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=17.2
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCcc
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVD 32 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~ 32 (86)
+++-. .-.|+.| .+++..|..+ |+.
T Consensus 14 v~~f~-~~~C~~C-~~~~~~L~~~-~~~ 38 (105)
T 1kte_A 14 VVVFI-KPTCPFC-RKTQELLSQL-PFK 38 (105)
T ss_dssp EEEEE-CSSCHHH-HHHHHHHHHS-CBC
T ss_pred EEEEE-cCCCHhH-HHHHHHHHHc-CCC
Confidence 44433 3689999 6788888875 554
No 126
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=32.84 E-value=4.7 Score=32.87 Aligned_cols=35 Identities=14% Similarity=0.058 Sum_probs=30.7
Q ss_pred eEEEEEEeecccHhHHH-HHHHHHhccCCccEEEEec
Q 036889 3 RMVVLKMMTMNDEKTKQ-KAIEAAADIYGVDSITADL 38 (86)
Q Consensus 3 ~~vvlkV~~m~C~~C~~-kI~kal~~l~GV~~v~vd~ 38 (86)
+++.|.++|+.|.+|.. .|..||... ||..+..++
T Consensus 21 ~~~~~~~dG~~~~~~~g~tv~~aL~~~-Gv~~~~~s~ 56 (965)
T 2gag_A 21 EALSLTVDGAKLSAFRGDTVASALLAN-GVRRAGNSL 56 (965)
T ss_dssp EEEEEEETTEEEEEEETCBHHHHHHHT-TCCBCSCCT
T ss_pred CeEEEEECCEEEEecCCCHHHHHHHHc-CCeEeecCC
Confidence 57899999999999999 899999987 998777664
No 127
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=32.49 E-value=81 Score=18.77 Aligned_cols=32 Identities=16% Similarity=0.397 Sum_probs=22.9
Q ss_pred HHHHHHHhccCCccEEEEecCCCEEEEEEeCCH
Q 036889 19 QKAIEAAADIYGVDSITADLKEQKLIIIGDMDA 51 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~ 51 (86)
.-+.+....+ |-..+.+.++..+|+|.|.++-
T Consensus 65 ailikvfael-gyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 65 AILIKVFAEL-GYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp HHHHHHHHHT-TCCEEEEEEETTEEEEEEEC--
T ss_pred HHHHHHHHHh-CCcceeEEEcCCeEEEEeEEcC
Confidence 3344555555 8888999999999999997654
No 128
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=32.34 E-value=75 Score=18.32 Aligned_cols=25 Identities=8% Similarity=0.106 Sum_probs=17.3
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCcc
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVD 32 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~ 32 (86)
+++-- .-.|+.| .+++..|..+ |+.
T Consensus 21 vv~f~-~~~Cp~C-~~~~~~L~~~-~~~ 45 (114)
T 2hze_A 21 VTIFV-KYTCPFC-RNALDILNKF-SFK 45 (114)
T ss_dssp EEEEE-CTTCHHH-HHHHHHHTTS-CBC
T ss_pred EEEEE-eCCChhH-HHHHHHHHHc-CCC
Confidence 34333 3689999 6788888775 565
No 129
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=32.18 E-value=66 Score=20.94 Aligned_cols=34 Identities=15% Similarity=-0.031 Sum_probs=23.6
Q ss_pred EEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCC
Q 036889 4 MVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKE 40 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~ 40 (86)
.++|-. .-.|+.| .++++.|... |+.--.+|...
T Consensus 171 ~i~ly~-~~~Cp~C-~~a~~~L~~~-~i~~~~~~i~~ 204 (241)
T 1nm3_A 171 SISIFT-KPGCPFC-AKAKQLLHDK-GLSFEEIILGH 204 (241)
T ss_dssp CEEEEE-CSSCHHH-HHHHHHHHHH-TCCCEEEETTT
T ss_pred eEEEEE-CCCChHH-HHHHHHHHHc-CCceEEEECCC
Confidence 344444 3689999 6788888875 77766666653
No 130
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=32.06 E-value=71 Score=18.24 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=29.4
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHh-hCC
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKK-IGK 63 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G~ 63 (86)
+++-. --.|+.| .+++..|..+ |+.--.+|.... ..+...+...|.+ .|+
T Consensus 21 v~vy~-~~~Cp~C-~~~~~~L~~~-~i~~~~~di~~~------~~~~~~~~~~l~~~~g~ 71 (113)
T 3rhb_A 21 VVIYS-KTWCSYC-TEVKTLFKRL-GVQPLVVELDQL------GPQGPQLQKVLERLTGQ 71 (113)
T ss_dssp EEEEE-CTTCHHH-HHHHHHHHHT-TCCCEEEEGGGS------TTHHHHHHHHHHHHHSC
T ss_pred EEEEE-CCCChhH-HHHHHHHHHc-CCCCeEEEeecC------CCChHHHHHHHHHHhCC
Confidence 44444 3689999 6888999886 776544443320 0123556666764 463
No 131
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=30.52 E-value=56 Score=22.33 Aligned_cols=59 Identities=14% Similarity=-0.015 Sum_probs=35.8
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccE-EEEecCCCEEEEEEeCCHHHHHHHHHhhCC-eEEEE
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDS-ITADLKEQKLIIIGDMDAVAIAKKLKKIGK-IEIVS 68 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~-v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~-a~ivs 68 (86)
|+.-+.---|..|+.+|..-|..-++|.= |-+. ++=-. +-+-.+=+..|..+|- ..|.+
T Consensus 102 vTwy~SWSPC~~CA~~v~~FL~~~~~v~L~If~a----RLY~~-~~~~~~gLr~L~~aG~~v~iM~ 162 (203)
T 3v4k_A 102 VTCFTSWSPCFSCAQEMAKFISKNKHVSLCIKTA----RIYDD-QGRCQEGLRTLAEAGAKISIMT 162 (203)
T ss_pred EEEEEeCCChHHHHHHHHHHHhhCCCeEEEEEEE----eeccc-CchHHHHHHHHHHCCCeEEecC
Confidence 45555556699999999999999988763 2221 11111 2233455566667774 44444
No 132
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=30.44 E-value=40 Score=20.22 Aligned_cols=23 Identities=9% Similarity=0.007 Sum_probs=19.7
Q ss_pred HhHHHHHHHHHhccCC-ccEEEEe
Q 036889 15 EKTKQKAIEAAADIYG-VDSITAD 37 (86)
Q Consensus 15 ~~C~~kI~kal~~l~G-V~~v~vd 37 (86)
.+-...+..++++++| |+|+++.
T Consensus 66 ~~~tD~lee~i~~~ed~VqSvdI~ 89 (94)
T 1f60_B 66 KVSLDDLQQSIEEDEDHVQSTDIA 89 (94)
T ss_dssp TCCHHHHHHHHHTCTTTEEEEEEE
T ss_pred ccChHHHHHHHHhccCceeEEEEE
Confidence 4567899999999999 9999874
No 133
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=30.17 E-value=1.1e+02 Score=20.55 Aligned_cols=46 Identities=11% Similarity=-0.054 Sum_probs=31.0
Q ss_pred ecccHhHHHHHHHHHhccCCccEEEEecCCCE-------------------EEEEEe---CCHHHHHHHHH
Q 036889 11 TMNDEKTKQKAIEAAADIYGVDSITADLKEQK-------------------LIIIGD---MDAVAIAKKLK 59 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~-------------------vtV~g~---vd~~~l~~~l~ 59 (86)
++-|==|...+ +.+++||.++.+-...|. |.|..+ ++-.+|++..-
T Consensus 8 agGCFWg~E~~---F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 8 AGGCFWGLEAY---FQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp EESCHHHHHHH---HHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred ecCCeeehHHH---HhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 45677775554 568899999988654443 566665 67777776654
No 134
>1tua_A Hypothetical protein APE0754; structural genomics, protein structure initiative, MCSG, four layers alpha-beta sandwich, PSI; 1.50A {Aeropyrum pernix} SCOP: d.51.1.1 d.51.1.1
Probab=29.98 E-value=1.2e+02 Score=20.11 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=34.6
Q ss_pred EEEEEeecccHhHH----HHHHHHHhccCCccEEEEecCCCEEEEEEe---CCHHHHHHHH
Q 036889 5 VVLKMMTMNDEKTK----QKAIEAAADIYGVDSITADLKEQKLIIIGD---MDAVAIAKKL 58 (86)
Q Consensus 5 vvlkV~~m~C~~C~----~kI~kal~~l~GV~~v~vd~~~~~vtV~g~---vd~~~l~~~l 58 (86)
..+.|| -+--+.. ..+.+.|...-|+. +.+|..++.++|... -||..+.+|-
T Consensus 6 ~~i~VP-~~rvg~liGk~g~~~k~i~e~~g~~-i~id~~~~~V~i~t~~~t~dp~~i~KA~ 64 (191)
T 1tua_A 6 IYVKVK-PERLGAVIGPRGEVKAEIMRRTGTV-ITVDTENSMVIVEPEAEGIPPVNLMKAA 64 (191)
T ss_dssp EEEECC-GGGHHHHHCGGGHHHHHHHHHHTEE-EEEETTTTEEEEEESSTTSCHHHHHHHH
T ss_pred eEEECC-HHHhhHHHhcCHhHHHHHHHHHCcE-EEEEcCCCeEEEEeCCCCCCHHHHHHHH
Confidence 456665 3333333 56777777766765 799999999999843 6666655553
No 135
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=29.72 E-value=84 Score=20.28 Aligned_cols=32 Identities=6% Similarity=0.137 Sum_probs=21.5
Q ss_pred EEEEEEeecccHhHHH---HHHHHHh-ccCCccEEEE
Q 036889 4 MVVLKMMTMNDEKTKQ---KAIEAAA-DIYGVDSITA 36 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~~---kI~kal~-~l~GV~~v~v 36 (86)
.+.++..| .|.+|.. -|+++|. .+|+|..|..
T Consensus 118 ~v~v~l~G-ac~~~~Tlk~~Ie~~l~e~vP~i~~V~~ 153 (154)
T 2z51_A 118 IVKIRITG-PAAGVMTVRVAVTQKLREKIPSIAAVQL 153 (154)
T ss_dssp EEEEEEES-GGGGCHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEEEEEec-CCcccHhHHHHHHHHHHHHCCCccEEEe
Confidence 45677754 5888842 4666665 8899888753
No 136
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=29.64 E-value=50 Score=25.74 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=27.1
Q ss_pred EEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 34 ITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 34 v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+++|.++..++|..-+--.+|.++|++.|+
T Consensus 267 leiD~~~~~atVeaGv~~~~L~~~L~~~Gl 296 (658)
T 4bby_A 267 LWVDENNLTAHVEAGITGQELERQLKESGY 296 (658)
T ss_dssp EEEETTTTEEEEETTCBHHHHHHHHHHHTE
T ss_pred EEEcCCCCEEEEecCchHHHHHHHHHHcCC
Confidence 478999999999988999999999999995
No 137
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=29.27 E-value=41 Score=20.02 Aligned_cols=23 Identities=13% Similarity=0.063 Sum_probs=19.8
Q ss_pred HhHHHHHHHHHhccCC-ccEEEEe
Q 036889 15 EKTKQKAIEAAADIYG-VDSITAD 37 (86)
Q Consensus 15 ~~C~~kI~kal~~l~G-V~~v~vd 37 (86)
.+-...+..++++++| |+|+++.
T Consensus 63 ~v~tD~lee~i~~~ed~VqSvdI~ 86 (91)
T 1b64_A 63 KVGTDMLEEQITAFEDYVQSMDVA 86 (91)
T ss_dssp SSCHHHHHHHHTTCTTTEEEEEES
T ss_pred ccChHHHHHHHHhccCceeEEEEE
Confidence 4567899999999999 9999874
No 138
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=28.34 E-value=70 Score=23.81 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=30.8
Q ss_pred ccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 27 DIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 27 ~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
.+.....|++|.+.+.++|.+-+--.+|..+|.+.|+
T Consensus 105 dl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~ 141 (500)
T 3tsh_A 105 DLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASP 141 (500)
T ss_dssp ECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCT
T ss_pred ECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCC
Confidence 3444556789999999999988999999999998885
No 139
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=28.19 E-value=98 Score=18.37 Aligned_cols=40 Identities=18% Similarity=0.111 Sum_probs=30.7
Q ss_pred HHHHHHHhccCCccEEEEecCCCEEEEEE--eCCHHHHHHHHHh
Q 036889 19 QKAIEAAADIYGVDSITADLKEQKLIIIG--DMDAVAIAKKLKK 60 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~~~~vtV~g--~vd~~~l~~~l~k 60 (86)
+-+-++|=+++||.+|-+. .+-++|+= ++|-+.|.-.|+.
T Consensus 39 SPLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 39 PEFINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp CHHHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 3456677799999999887 46899985 3788888777764
No 140
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=28.12 E-value=87 Score=18.49 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=30.1
Q ss_pred EEEEEEeecccHhHH----HHHHHHHhccCCccEEEEecCC--------CEEEEEEeCCHHHHHHHHH
Q 036889 4 MVVLKMMTMNDEKTK----QKAIEAAADIYGVDSITADLKE--------QKLIIIGDMDAVAIAKKLK 59 (86)
Q Consensus 4 ~vvlkV~~m~C~~C~----~kI~kal~~l~GV~~v~vd~~~--------~~vtV~g~vd~~~l~~~l~ 59 (86)
+..|.|+. ..-++. .+..+.|....|+ .|+++... ..|+|.| +++.+..|+.
T Consensus 8 ~~~i~IP~-~~vG~IIGkgG~~Ik~I~~~TGa-~I~I~~~~~~~~~~~~r~V~I~G--~~e~v~~A~~ 71 (107)
T 2hh2_A 8 EMTFSIPT-HKCGLVIGRGGENVKAINQQTGA-FVEISRQLPPNGDPNFKLFIIRG--SPQQIDHAKQ 71 (107)
T ss_dssp CEEEEEEG-GGTTTTSTTTTCHHHHHHHHSSS-EEEECCCCCTTCCTTEEEEEEES--CHHHHHHHHH
T ss_pred eEEEEECH-HHcCccCCCCcHHHHHHHHHhCC-EEEEcCccCCCCCCCceEEEEEC--CHHHHHHHHH
Confidence 45667753 333332 2334456666787 47776542 6788888 5566655554
No 141
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=27.54 E-value=93 Score=18.69 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=35.4
Q ss_pred CceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEec-----C-CC----------------E--EEE-EEeCCHHHHH
Q 036889 1 MARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADL-----K-EQ----------------K--LII-IGDMDAVAIA 55 (86)
Q Consensus 1 M~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~-----~-~~----------------~--vtV-~g~vd~~~l~ 55 (86)
||+.++.-|+ +.-...++++|... |+...++.. . .+ + +.+ .-+-+.+.++
T Consensus 2 ~Mk~I~aII~----~~~~~~v~~aL~~~-G~~g~Tv~~v~G~G~~~g~~~~~~G~~~~~~~~pK~~ieivv~de~v~~vv 76 (119)
T 2j9c_A 2 SMKKVEAIIR----PEKLEIVKKALSDA-GYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVI 76 (119)
T ss_dssp CEEEEEEEEC----GGGHHHHHHHHHHT-TCCCEEEEEEEEECCSSSSCCEETTEECSSSCEEEEEEEEEEEGGGHHHHH
T ss_pred ceEEEEEEEC----HHHHHHHHHHHHHC-CCCeEEEEeeEeecccCCccceeeccccccccCcEEEEEEEEcHHHHHHHH
Confidence 6777777775 67788899999886 666554421 1 11 1 222 2346788899
Q ss_pred HHHHh
Q 036889 56 KKLKK 60 (86)
Q Consensus 56 ~~l~k 60 (86)
++|++
T Consensus 77 ~~I~~ 81 (119)
T 2j9c_A 77 DIICE 81 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 142
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=27.38 E-value=45 Score=22.45 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=27.0
Q ss_pred EEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 34 ITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 34 v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+++|.+++.++|..-+.-.+|.+++.+.|+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl 30 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGL 30 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCC
Confidence 468999999999999999999999998885
No 143
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=27.15 E-value=1.8e+02 Score=21.19 Aligned_cols=42 Identities=7% Similarity=-0.046 Sum_probs=29.2
Q ss_pred HHHHHHHHHhccCCccEE--EEecCCCEEEEEEeCCHHHHHHHH
Q 036889 17 TKQKAIEAAADIYGVDSI--TADLKEQKLIIIGDMDAVAIAKKL 58 (86)
Q Consensus 17 C~~kI~kal~~l~GV~~v--~vd~~~~~vtV~g~vd~~~l~~~l 58 (86)
=..+|.+++.+.+||.=+ .-|...++..++.--+|+.|.+++
T Consensus 18 vIe~I~~a~~~~~gv~LLd~~~D~~~NRsv~T~vg~pe~v~eaa 61 (325)
T 1qd1_A 18 VIDAISRAVAQTPGCVLLDVDSGPSTNRTVYTFVGRPEDVVEGA 61 (325)
T ss_dssp HHHHHHHHHHTSTTCEEEEEEEETTTTEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEeCCCCCCCCCceEEEccChHHHHHHH
Confidence 347788899999997754 457777886666444476666654
No 144
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=27.05 E-value=39 Score=19.93 Aligned_cols=17 Identities=6% Similarity=-0.027 Sum_probs=14.3
Q ss_pred HHHHHHHHhccCCccEE
Q 036889 18 KQKAIEAAADIYGVDSI 34 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v 34 (86)
..+|+.+|.+++||.+|
T Consensus 12 ~~~I~~~l~~~~gV~~v 28 (107)
T 2zzt_A 12 YDDIFAVLERFPNVHNP 28 (107)
T ss_dssp HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHcCCCcccc
Confidence 47899999999998765
No 145
>2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A*
Probab=26.89 E-value=2e+02 Score=21.60 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=38.6
Q ss_pred cHhHHHHHHHHHhccCCccEE--EEecCCCEEEEEEe------CC-HHHHHHHHHhhCCe
Q 036889 14 DEKTKQKAIEAAADIYGVDSI--TADLKEQKLIIIGD------MD-AVAIAKKLKKIGKI 64 (86)
Q Consensus 14 C~~C~~kI~kal~~l~GV~~v--~vd~~~~~vtV~g~------vd-~~~l~~~l~k~G~a 64 (86)
|+.-...|..++.+.+--..| ++-..++.|.|.|+ +| +.-+.+.|++.||.
T Consensus 35 cDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~ 94 (396)
T 2p02_A 35 CDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYD 94 (396)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcccccCCHHHHHHHHHHHhCCC
Confidence 777888888888777755544 66778899999986 68 55566777889985
No 146
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=26.69 E-value=1.1e+02 Score=19.41 Aligned_cols=39 Identities=21% Similarity=0.361 Sum_probs=25.3
Q ss_pred HHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 24 AAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 24 al~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
....|+|. .+.+....+.=.+-|++.+.+|.++|++.|+
T Consensus 67 ~a~~L~~~-~v~i~~k~g~gklfGSVt~~dIa~al~~~g~ 105 (146)
T 1nkw_F 67 LASRLNGV-AVELSVRAGEGKIYGAVTHQDVANSLDQLGF 105 (146)
T ss_pred HHHHhcCC-EEEEEEEcCCCceeeccCHHHHHHHHHHcCC
Confidence 33455665 3555443322234789999999999997785
No 147
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=26.31 E-value=37 Score=18.33 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=14.3
Q ss_pred HHHHhccCCccEEEEec
Q 036889 22 IEAAADIYGVDSITADL 38 (86)
Q Consensus 22 ~kal~~l~GV~~v~vd~ 38 (86)
.+.|++.+||..|+-|.
T Consensus 44 ~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 44 VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp HHHHHTSTTEEEEEECC
T ss_pred HHHHhcCCCceEEecCc
Confidence 35789999999999884
No 148
>3boe_A Cadmium-specific carbonic anhydrase; marine diatom, cadmium-bound, acetate LI lyase; 1.40A {Thalassiosira weissflogii} SCOP: c.154.1.1 PDB: 3boc_A 3bob_A 3boj_A 3boh_A
Probab=25.96 E-value=62 Score=22.01 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHhhCC-eEEEEcC
Q 036889 49 MDAVAIAKKLKKIGK-IEIVSVG 70 (86)
Q Consensus 49 vd~~~l~~~l~k~G~-a~ivsv~ 70 (86)
+.|.+|..+|+..|+ |+|++-.
T Consensus 2 ~tp~di~~aLq~RGW~AeIv~~~ 24 (210)
T 3boe_A 2 ISPAQIAEALQGRGWDAEIVTDA 24 (210)
T ss_dssp CCHHHHHHHHHTTTCEEEEEESG
T ss_pred CCHHHHHHHHHcCCCceEEechh
Confidence 679999999999998 8988753
No 149
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=25.73 E-value=1.3e+02 Score=21.34 Aligned_cols=47 Identities=11% Similarity=-0.069 Sum_probs=31.2
Q ss_pred ecccHhHHHHHHHHHhccCCccEEEEecCCCE-------------------EEEEEe---CCHHHHHHHHHh
Q 036889 11 TMNDEKTKQKAIEAAADIYGVDSITADLKEQK-------------------LIIIGD---MDAVAIAKKLKK 60 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~-------------------vtV~g~---vd~~~l~~~l~k 60 (86)
++-|==|..+ .+.+++||.++.+-...|. |.|.++ ++-++|++...+
T Consensus 100 AgGCFWgvE~---~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~ 168 (261)
T 2j89_A 100 GAGCFWGVEL---AFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWA 168 (261)
T ss_dssp EESSHHHHHH---HHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ecCCeeeeHH---HHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4567777554 5667899999988655543 666665 666677666543
No 150
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=25.66 E-value=94 Score=20.98 Aligned_cols=28 Identities=14% Similarity=-0.089 Sum_probs=22.6
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCcc
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVD 32 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~ 32 (86)
|+--+.=--|..|+.+|...|.+-++|.
T Consensus 88 VTwy~SwSPC~~CA~~va~FL~~~~~v~ 115 (190)
T 3vow_A 88 VTWYTSWSPCPDCAGEVAEFLARHSNVN 115 (190)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHCTTEE
T ss_pred EEEEEeCCchHHHHHHHHHHHHhCCCeE
Confidence 4555555679999999999999988764
No 151
>3htu_A Vacuolar protein-sorting-associated protein 25; ESCRT-II, ESCRT-III, VPS20, VPS25, MVB, cytoplasm, nucleus, polymorphism, protein transport; 2.00A {Homo sapiens}
Probab=25.22 E-value=75 Score=18.44 Aligned_cols=22 Identities=27% Similarity=0.507 Sum_probs=17.9
Q ss_pred CCHHHHHHHHH---hhCCeEEEEcC
Q 036889 49 MDAVAIAKKLK---KIGKIEIVSVG 70 (86)
Q Consensus 49 vd~~~l~~~l~---k~G~a~ivsv~ 70 (86)
+|+.-|+++|+ +.|+|+|+...
T Consensus 47 md~~~L~kaL~~L~k~gkA~i~~~~ 71 (79)
T 3htu_A 47 LDEATLLRALQALQQEHKAEIITVS 71 (79)
T ss_dssp CCHHHHHHHHHHHHHTTSEEEECCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecC
Confidence 79999988886 67999998643
No 152
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=24.81 E-value=53 Score=20.67 Aligned_cols=22 Identities=23% Similarity=0.596 Sum_probs=17.6
Q ss_pred ccCCcc--EEEEec-CCCEEEEEEe
Q 036889 27 DIYGVD--SITADL-KEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~-~~~~vtV~g~ 48 (86)
.+||+. .++|+. +.+.++|.|.
T Consensus 60 dlPGv~kedI~V~v~~~~~L~I~g~ 84 (151)
T 1gme_A 60 DLPGVKKEEVKVEVEDGNVLVVSGE 84 (151)
T ss_dssp ECTTCCGGGEEEEEETTTEEEEEEC
T ss_pred ECCCCChHHEEEEEecCCEEEEEEE
Confidence 578885 588888 5689999986
No 153
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=24.77 E-value=1.5e+02 Score=20.31 Aligned_cols=47 Identities=15% Similarity=0.075 Sum_probs=31.3
Q ss_pred ecccHhHHHHHHHHHhccCCccEEEEecCCC-------------------EEEEEEe---CCHHHHHHHHHh
Q 036889 11 TMNDEKTKQKAIEAAADIYGVDSITADLKEQ-------------------KLIIIGD---MDAVAIAKKLKK 60 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~-------------------~vtV~g~---vd~~~l~~~l~k 60 (86)
++-|==|..+ .+.+++||.++.+-...| -|.|.++ ++-++|++...+
T Consensus 48 agGCFWg~E~---~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 48 AMGXFWGVER---LFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp ECSSHHHHHH---HHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ecCCeEEehh---hHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 5667777555 466789999998865543 2566665 666677766654
No 154
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=24.75 E-value=1.2e+02 Score=18.09 Aligned_cols=45 Identities=13% Similarity=0.071 Sum_probs=30.9
Q ss_pred HHHHHhccCCcc--EEEEecCCCEEEEEEe---C-CHHHHHHHHHhhCC-eEE
Q 036889 21 AIEAAADIYGVD--SITADLKEQKLIIIGD---M-DAVAIAKKLKKIGK-IEI 66 (86)
Q Consensus 21 I~kal~~l~GV~--~v~vd~~~~~vtV~g~---v-d~~~l~~~l~k~G~-a~i 66 (86)
+..+|+..+|+. ++.+|...+.+.+.-. + +-+.+...|.+ || +++
T Consensus 17 L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~ 68 (95)
T 2w7v_A 17 LPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQ 68 (95)
T ss_dssp HHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEE
T ss_pred HHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEeh
Confidence 456677888855 7888889999988753 3 35566667754 87 444
No 155
>3aqo_A Probable secdf protein-export membrane protein; periplasmic domain, translocon, cell membrane, M protein transport, translocation; 2.60A {Thermus thermophilus}
Probab=24.57 E-value=1.7e+02 Score=19.81 Aligned_cols=52 Identities=12% Similarity=0.108 Sum_probs=37.0
Q ss_pred HHHHHHHhccCCccEEEEecC-CCEEEEEEe--CCHHH--HHHHHHhhCCeEEEEcCC
Q 036889 19 QKAIEAAADIYGVDSITADLK-EQKLIIIGD--MDAVA--IAKKLKKIGKIEIVSVGP 71 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~-~~~vtV~g~--vd~~~--l~~~l~k~G~a~ivsv~~ 71 (86)
.-|+++|..+ ||....|-.. ++++.|.-. -|++. +.+.|.+++.-++..+.+
T Consensus 30 ~ilr~Rvn~~-GvsEp~I~~~G~~rI~VelPGv~d~~~~~a~~llg~ta~LeFr~v~~ 86 (229)
T 3aqo_A 30 TVLENRINAL-GVAEPLIQIQGQKRIVVELPGLSQADQDRALKLIGQRAVLEFRIVKE 86 (229)
T ss_dssp HHHHHHHHHH-TCSSCEEEEETTTEEEEEECSCCHHHHHHHHHHHHCCCCEEEEEBCT
T ss_pred HHHHHHHhhc-CCCccEEEEeCCCeEEEECCCCCCHHHHHHHHHhCCceEEEEEEccC
Confidence 4566677665 8987665443 368988853 58988 999999888766666644
No 156
>1p7l_A S-adenosylmethionine synthetase; AMPPNP, SAM, transferase; HET: SAM ANP PPK; 2.50A {Escherichia coli} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1fug_A 1mxb_A* 1mxc_A* 1mxa_A* 1rg9_A* 1xra_A 1xrb_A 1xrc_A
Probab=24.57 E-value=2.2e+02 Score=21.28 Aligned_cols=51 Identities=12% Similarity=0.266 Sum_probs=38.1
Q ss_pred cHhHHHHHHHHHhccCCccEE--EEecCCCEEEEEEe------CC-HHHHHHHHHhhCCe
Q 036889 14 DEKTKQKAIEAAADIYGVDSI--TADLKEQKLIIIGD------MD-AVAIAKKLKKIGKI 64 (86)
Q Consensus 14 C~~C~~kI~kal~~l~GV~~v--~vd~~~~~vtV~g~------vd-~~~l~~~l~k~G~a 64 (86)
|+.-...|..++.+.+--..| ++-..++.|.|.|+ +| +.-+.+.|++.||.
T Consensus 19 cDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~ 78 (383)
T 1p7l_A 19 ADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYV 78 (383)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHhhCCCCcEEEEEEeecCcEEEEEEEeccccCCHHHHHHHHHHHhCCC
Confidence 777778888887777655544 66778899999986 68 55566777889985
No 157
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=24.44 E-value=79 Score=23.70 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=30.3
Q ss_pred cCCccEE-EEecCCCEEEEEEeCCHHHHHHHHHhhCCe
Q 036889 28 IYGVDSI-TADLKEQKLIIIGDMDAVAIAKKLKKIGKI 64 (86)
Q Consensus 28 l~GV~~v-~vd~~~~~vtV~g~vd~~~l~~~l~k~G~a 64 (86)
+.+...+ ++|.+++.|+|.+-+.-.+|.+.+.+.|++
T Consensus 94 l~~l~~i~~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~ 131 (481)
T 4feh_A 94 MTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLW 131 (481)
T ss_dssp CTTCCCEEEEETTTTEEEEETTCBHHHHHHHHGGGTEE
T ss_pred CccCCCceEEcCCCCEEEEcCCccHHHHHHHHHHcCCE
Confidence 3344455 789899999999989999999999999963
No 158
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=24.25 E-value=49 Score=21.63 Aligned_cols=22 Identities=9% Similarity=0.226 Sum_probs=17.4
Q ss_pred ccCCcc--EEEEecCCCEEEEEEe
Q 036889 27 DIYGVD--SITADLKEQKLIIIGD 48 (86)
Q Consensus 27 ~l~GV~--~v~vd~~~~~vtV~g~ 48 (86)
.++|+. .++|...++.++|.|.
T Consensus 80 dlPG~~~edI~V~v~~~~L~I~g~ 103 (175)
T 2klr_A 80 DVKHFSPEELKVKVLGDVIEVHGK 103 (175)
T ss_dssp CCSSCCGGGEEEEEETTEEEEEEE
T ss_pred ECCCCChHHEEEEEECCEEEEEEE
Confidence 467775 4888888899999985
No 159
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=24.03 E-value=46 Score=21.67 Aligned_cols=28 Identities=18% Similarity=0.149 Sum_probs=21.9
Q ss_pred EEeCCHHHHHHHHHhhCCeEEEEcCCCC
Q 036889 46 IGDMDAVAIAKKLKKIGKIEIVSVGPAK 73 (86)
Q Consensus 46 ~g~vd~~~l~~~l~k~G~a~ivsv~~~~ 73 (86)
.|.+|-..++++|++.||.-.++++...
T Consensus 224 ~G~id~~~~~~~L~~~gy~g~~~~E~~~ 251 (275)
T 3qc0_A 224 DGVIDLKGIRRRIEAAGFHGAQEVEIFS 251 (275)
T ss_dssp SSCCCHHHHHHHHHHTTCCCCEEECCCB
T ss_pred CCccCHHHHHHHHHHcCCCceEEEEecC
Confidence 3679999999999999985556666544
No 160
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=23.98 E-value=1e+02 Score=20.37 Aligned_cols=26 Identities=12% Similarity=0.175 Sum_probs=21.3
Q ss_pred EEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 35 TADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 35 ~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
-.=+.+|+++|+|.=.++++.++++.
T Consensus 144 ~lIF~SGkivitGak~~~~~~~a~~~ 169 (180)
T 1ytb_A 144 LLIFVSGKIVLTGAKQREEIYQAFEA 169 (180)
T ss_dssp EEECTTSEEEEEEESSHHHHHHHHHH
T ss_pred EEEecCCeEEEEecCCHHHHHHHHHH
Confidence 34568899999999888888888765
No 161
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=23.87 E-value=64 Score=21.05 Aligned_cols=26 Identities=19% Similarity=0.137 Sum_probs=21.2
Q ss_pred EeCCHHHHHHHHHhhCCeEEEEcCCC
Q 036889 47 GDMDAVAIAKKLKKIGKIEIVSVGPA 72 (86)
Q Consensus 47 g~vd~~~l~~~l~k~G~a~ivsv~~~ 72 (86)
|.+|-..++++|++.||.-.++++..
T Consensus 227 G~id~~~~~~~L~~~gy~g~~~lE~~ 252 (281)
T 3u0h_A 227 GRIPLVPFLRGLYLAGYRGPVAAEVL 252 (281)
T ss_dssp SSSCHHHHHHHHHHHTCCSEEEECCC
T ss_pred cCcCHHHHHHHHHHcCCCCcEEEEec
Confidence 56999999999999998655666653
No 162
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=23.69 E-value=1.4e+02 Score=21.76 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=29.6
Q ss_pred HHHHHHHHHhccCCccEEEEecCCCEEEEEEe-CCHHHHHHHHHhh-C
Q 036889 17 TKQKAIEAAADIYGVDSITADLKEQKLIIIGD-MDAVAIAKKLKKI-G 62 (86)
Q Consensus 17 C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~-vd~~~l~~~l~k~-G 62 (86)
..++|+++|..+++ +.+....+.+.|..+ -|.+.+.++|+++ |
T Consensus 37 L~~ni~~~l~~~~~---~~v~~~~gri~v~~~~~~~~~~~~~L~~vfG 81 (413)
T 2c5s_A 37 LKDNVKFKLKKFPN---IKIDATHDRMYIQLNGEDHEAVSERLKDVFG 81 (413)
T ss_dssp HHHHHHHHTTTSTT---CEEEECSSCEEEECTTCCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhhcCc---eEEEEECCEEEEEeCCCCHHHHHHHHhhCCC
Confidence 56788888877744 345556688888654 3677788888774 5
No 163
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=23.67 E-value=91 Score=18.40 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=28.4
Q ss_pred HHHHHHHhccCCccEEEEecCCCEEEEEEe--CCHHHHHHHHHh
Q 036889 19 QKAIEAAADIYGVDSITADLKEQKLIIIGD--MDAVAIAKKLKK 60 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~~~~vtV~g~--vd~~~l~~~l~k 60 (86)
+-+-++|=.++||.+|-+. .+-++|+=. +|-+.|...|+.
T Consensus 39 SPLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp CHHHHHHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHH
T ss_pred CHHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 3455667789999999887 468999853 666666655553
No 164
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=23.57 E-value=49 Score=21.97 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=21.6
Q ss_pred EeCCHHHHHHHHHhhCCeEEEEcCCCCC
Q 036889 47 GDMDAVAIAKKLKKIGKIEIVSVGPAKA 74 (86)
Q Consensus 47 g~vd~~~l~~~l~k~G~a~ivsv~~~~~ 74 (86)
|.+|-..++++|++.||.-.++++...+
T Consensus 222 G~id~~~~~~~L~~~gy~g~~~lE~~~~ 249 (294)
T 3vni_A 222 GRIPWVEIGEALADIGYNGSVVMEPFVR 249 (294)
T ss_dssp SSCCHHHHHHHHHHTTCCSCEEECCCCC
T ss_pred CCcCHHHHHHHHHHhCCCCcEEEEeccC
Confidence 5699999999999999854566655443
No 165
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=23.52 E-value=1e+02 Score=20.67 Aligned_cols=26 Identities=23% Similarity=0.290 Sum_probs=19.4
Q ss_pred EEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 35 TADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 35 ~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
-.=+.+|+++++|.-+.+++..++++
T Consensus 152 ~lIF~SGKiviTGaks~~~~~~A~~~ 177 (198)
T 1mp9_A 152 LLIFSSGKMVITGAKREDEVHKAVKK 177 (198)
T ss_dssp EEECTTSEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCEEEEEecCCHHHHHHHHHH
Confidence 34567899999998777776666654
No 166
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=23.37 E-value=74 Score=20.42 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=25.5
Q ss_pred HHhccCCccEEEEecCCC-EEEEEEeCCHHHHHHHHHhhCC
Q 036889 24 AAADIYGVDSITADLKEQ-KLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 24 al~~l~GV~~v~vd~~~~-~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
....|+|+..+.+....+ .=.+-|++.+.+|.++|++.|+
T Consensus 68 ~~~~L~~~~~v~i~~k~g~~gklfGSVt~~dIa~al~~~g~ 108 (149)
T 3r8s_H 68 RAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGV 108 (149)
T ss_dssp HHHHHHTTCCEEEEECBCTTSEEEEEECHHHHHHHHHTTSC
T ss_pred HHHHhcCCcEEEEEEEcCCCCceEcccCHHHHHHHHHHcCC
Confidence 344555653345433321 1245789999999999998785
No 167
>2p2r_A Poly(RC)-binding protein 2; protein-DNA complex, RNA and DNA binding protein/DNA complex; 1.60A {Homo sapiens}
Probab=23.34 E-value=99 Score=16.79 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=22.8
Q ss_pred HHHHHHhccCCccEEEEec-----CCCEEEEEEeCCHHHHHHHHH
Q 036889 20 KAIEAAADIYGVDSITADL-----KEQKLIIIGDMDAVAIAKKLK 59 (86)
Q Consensus 20 kI~kal~~l~GV~~v~vd~-----~~~~vtV~g~vd~~~l~~~l~ 59 (86)
+..+.|....|+. +.++. ..+.++|.|+ ++.+..|..
T Consensus 25 ~~Ik~I~~~tga~-I~i~~~~~~~~~~~v~I~G~--~~~v~~A~~ 66 (76)
T 2p2r_A 25 AKINEIRQMSGAQ-IKIANPVEGSTDRQVTITGS--AASISLAQY 66 (76)
T ss_dssp HHHHHHHHHHCCE-EEECCCCTTCSEEEEEEEEC--HHHHHHHHH
T ss_pred hHHHHHHHHHCCE-EEEcCCCCCCCeEEEEEEeC--HHHHHHHHH
Confidence 3444555556754 66654 2578999996 666655544
No 168
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=23.16 E-value=1e+02 Score=16.73 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=22.2
Q ss_pred HHHHHHHhccCCccEEEEecCCCEEEEEEeC
Q 036889 19 QKAIEAAADIYGVDSITADLKEQKLIIIGDM 49 (86)
Q Consensus 19 ~kI~kal~~l~GV~~v~vd~~~~~vtV~g~v 49 (86)
.-+.+....+ |-..+.+.-+.++|+|.|.+
T Consensus 21 ailikvfael-gyndinvtwdgdtvtvegql 50 (62)
T 2gjh_A 21 AILIKVFAEL-GYNDINVTWDGDTVTVEGQL 50 (62)
T ss_dssp HHHHHHHHHT-TCCSCEEEECSSCEEEEEEC
T ss_pred HHHHHHHHHh-CcccceeEEcCCEEEEEeEE
Confidence 3344555555 78888888889999999864
No 169
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=22.64 E-value=1.3e+02 Score=17.75 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=19.2
Q ss_pred HHHHHHhccCCccEEEEecCCCEEEEEEe
Q 036889 20 KAIEAAADIYGVDSITADLKEQKLIIIGD 48 (86)
Q Consensus 20 kI~kal~~l~GV~~v~vd~~~~~vtV~g~ 48 (86)
+|++.....+|| .|.+.-.++.|++.|.
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~~~~~ItI~G~ 75 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTEGEDKITLEGP 75 (102)
T ss_dssp HHHHHHHHCSSS-EEEECSSSCEEEEEEC
T ss_pred cHHHHHHHcCCc-EEEeCCCCCEEEEECC
Confidence 455555556665 4566556789999997
No 170
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=22.57 E-value=67 Score=21.16 Aligned_cols=51 Identities=10% Similarity=0.077 Sum_probs=30.2
Q ss_pred HHHHHhccCC-ccEEEEecCCCEEEE-EEeCCHHHHHHHHHhhCCeEEEEcCC
Q 036889 21 AIEAAADIYG-VDSITADLKEQKLII-IGDMDAVAIAKKLKKIGKIEIVSVGP 71 (86)
Q Consensus 21 I~kal~~l~G-V~~v~vd~~~~~vtV-~g~vd~~~l~~~l~k~G~a~ivsv~~ 71 (86)
+...|..+.+ +..|-+.-..++... .|.+|-..++++|++.||.-.++++-
T Consensus 196 ~~~~l~~~~~~i~~vHl~D~~~r~~~G~G~id~~~~~~~L~~~gy~g~i~lE~ 248 (269)
T 3ngf_A 196 LTRLIEKMNGAFSHVQIASVPDRHEPDEGELNYPYLFSVLESVGYRGWVGCEY 248 (269)
T ss_dssp HHHHHHHTTTSEEEEEECCTTTCCCTTSSSBCHHHHHHHHHHTTCCSEEEECC
T ss_pred HHHHHHHhhhhEEEEEEecCCCCCCCCCCccCHHHHHHHHHHcCCCceEEEEe
Confidence 3444444432 444555332222211 35699999999999999854555554
No 171
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=22.39 E-value=1.4e+02 Score=18.00 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=27.5
Q ss_pred ecccHhHHHHHHHHHhccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 11 TMNDEKTKQKAIEAAADIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 11 ~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
.-.|+.| .++++.|... |+.--.+|...+. .+..++.+.+.+
T Consensus 8 ~~~C~~C-~ka~~~L~~~-gi~y~~~di~~~~------~~~~el~~~l~~ 49 (132)
T 1z3e_A 8 SPSCTSC-RKARAWLEEH-EIPFVERNIFSEP------LSIDEIKQILRM 49 (132)
T ss_dssp CTTCHHH-HHHHHHHHHT-TCCEEEEETTTSC------CCHHHHHHHHHT
T ss_pred CCCChHH-HHHHHHHHHc-CCceEEEEccCCC------ccHHHHHHHHHH
Confidence 3589999 7788888874 8876666665432 334555555543
No 172
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=22.35 E-value=1.1e+02 Score=20.10 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=21.2
Q ss_pred EecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 36 ADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 36 vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
.=+.+|+++++|.=+.+++..++++
T Consensus 149 lIF~SGKiviTGaks~~~~~~a~~~ 173 (182)
T 1ais_A 149 LLFSSGKIVCSGAKSEADAWEAVRK 173 (182)
T ss_dssp EECTTSEEEEEEESSHHHHHHHHHH
T ss_pred EEecCCEEEEEecCCHHHHHHHHHH
Confidence 4568899999999888888888876
No 173
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=22.29 E-value=31 Score=19.69 Aligned_cols=12 Identities=25% Similarity=0.218 Sum_probs=6.2
Q ss_pred EecCCCEEEEEE
Q 036889 36 ADLKEQKLIIIG 47 (86)
Q Consensus 36 vd~~~~~vtV~g 47 (86)
++...|.++|.|
T Consensus 25 L~T~~G~L~IkG 36 (71)
T 2ks0_A 25 LETIQGVLSIKG 36 (71)
T ss_dssp EEETTEEEEEEE
T ss_pred EEeCceEEEEEc
Confidence 344445555555
No 174
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=22.21 E-value=1.4e+02 Score=24.35 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=33.9
Q ss_pred HHHHHHHHhccCCccEEEEecCCCEEEEEEe----------CCHHHHHHHHHh
Q 036889 18 KQKAIEAAADIYGVDSITADLKEQKLIIIGD----------MDAVAIAKKLKK 60 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~----------vd~~~l~~~l~k 60 (86)
...+...|.+++|+.++..+...+.-.+.-. +++.++.++|+.
T Consensus 704 a~~l~~~l~~~~gv~~v~~~~~~~~~~l~i~id~~~a~~~Gls~~~v~~~l~~ 756 (1054)
T 3ne5_A 704 AEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTVADVQLFVTS 756 (1054)
T ss_dssp HHHHHHHHHHSTTCSEEEECCSSCEEEEEEEECHHHHHTTTCCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCceEeeccccCCCeeEEEEECHHHHHHcCCCHHHHHHHHHH
Confidence 4678899999999999999887766555433 567788888885
No 175
>2db7_A Hairy/enhancer-OF-split related with YRPW motif 1; structural genomics, unknown function, DNA binding protein, NPPSFA; 1.90A {Homo sapiens} SCOP: a.273.1.1
Probab=21.67 E-value=56 Score=18.15 Aligned_cols=18 Identities=17% Similarity=0.150 Sum_probs=15.7
Q ss_pred HhHHHHHHHHHhccCCcc
Q 036889 15 EKTKQKAIEAAADIYGVD 32 (86)
Q Consensus 15 ~~C~~kI~kal~~l~GV~ 32 (86)
..|..-|.+-|+.++|++
T Consensus 25 ~eC~~EV~rfLs~~eg~d 42 (64)
T 2db7_A 25 RECLAEVARYLSIIEGLD 42 (64)
T ss_dssp HHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHhcCCCCC
Confidence 369999999999999875
No 176
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=21.65 E-value=51 Score=18.49 Aligned_cols=17 Identities=0% Similarity=-0.183 Sum_probs=13.7
Q ss_pred HHHHHHHHhcc--CCccEE
Q 036889 18 KQKAIEAAADI--YGVDSI 34 (86)
Q Consensus 18 ~~kI~kal~~l--~GV~~v 34 (86)
...|+..|.++ +||.+|
T Consensus 12 ~~~I~~~l~~~~~~gV~~v 30 (94)
T 3byp_A 12 VERIRAFLQERIRGRALEV 30 (94)
T ss_dssp HHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHhcCCCCceee
Confidence 57888999998 887765
No 177
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=21.50 E-value=2.1e+02 Score=19.77 Aligned_cols=45 Identities=18% Similarity=0.238 Sum_probs=31.5
Q ss_pred HHHHHHHHhccCCccEEEEecCCCEEEEEEe-CCHHHHHHHHHhhCC
Q 036889 18 KQKAIEAAADIYGVDSITADLKEQKLIIIGD-MDAVAIAKKLKKIGK 63 (86)
Q Consensus 18 ~~kI~kal~~l~GV~~v~vd~~~~~vtV~g~-vd~~~l~~~l~k~G~ 63 (86)
...++..+...+||.-.-+| ..++++|.|+ -+.+.+...|+..|.
T Consensus 137 ~~~v~~~l~~~~~v~iA~~N-sp~~~visG~~~~l~~~~~~l~~~g~ 182 (305)
T 2cuy_A 137 LEEIQKALEGLEGVEIANLN-APEQTVISGRRQAVEEAAERLKERRA 182 (305)
T ss_dssp HHHHHHHHTTCSSEEEEEEE-ETTEEEEEEEHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCeEEEEEe-cCCcEEEEcCHHHHHHHHHHHHhCCc
Confidence 45677778777775444444 4478999998 555678888887774
No 178
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=21.37 E-value=61 Score=19.81 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=28.8
Q ss_pred ccCCccEEEEecCCCEEEEEEeCCHHHHHHHHHh-hC
Q 036889 27 DIYGVDSITADLKEQKLIIIGDMDAVAIAKKLKK-IG 62 (86)
Q Consensus 27 ~l~GV~~v~vd~~~~~vtV~g~vd~~~l~~~l~k-~G 62 (86)
.+.||.-+.+|.+..-..+..-++|...+.+|.. .|
T Consensus 95 ~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~~~~ 131 (143)
T 3mso_A 95 ELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGEEMG 131 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHHHHH
Confidence 5778888888876677788888999999999873 44
No 179
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.30 E-value=1.8e+02 Score=18.90 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=36.0
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhcc---CCccEEEEe---------cCC------CEEEEEEeCCHHHHHHHHH
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADI---YGVDSITAD---------LKE------QKLIIIGDMDAVAIAKKLK 59 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l---~GV~~v~vd---------~~~------~~vtV~g~vd~~~l~~~l~ 59 (86)
|.++.|.+ |-.-+.-...+..|+..| +|+.-+.++ ..+ .-+.+..+.+|.+|++.++
T Consensus 4 M~~v~i~L-GSNlGd~~~~l~~A~~~L~~~~~~~v~~~S~~yeT~P~G~~~q~~FlN~v~~~~T~l~p~~LL~~l~ 78 (161)
T 3qbc_A 4 MIQAYLGL-GSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCL 78 (161)
T ss_dssp CEEEEEEE-EECSSSHHHHHHHHHHHHHHSTTEEEEEECCCEEECCSSSSSSCCEEEEEEEEEECSCHHHHHHHHH
T ss_pred ccEEEEEE-ecCccCHHHHHHHHHHHHhcCCCCceEEECCEEEECCCCCCCCCcceEEEEEEEeCCCHHHHHHHHH
Confidence 45678888 777766677777776644 565433331 111 2345556699999998875
No 180
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=21.16 E-value=83 Score=22.15 Aligned_cols=23 Identities=13% Similarity=0.416 Sum_probs=19.0
Q ss_pred cCCCEEEEEEeCCHHHHHHHHHh
Q 036889 38 LKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 38 ~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
..+-.+.|.|++|++++...+++
T Consensus 187 p~n~~l~vvGd~d~~~~~~~v~~ 209 (445)
T 3ami_A 187 PNNATVVVVGDVEHEAVFRLAEQ 209 (445)
T ss_dssp GGGEEEEEEESCCHHHHHHHHHH
T ss_pred ccceEEEEEcCCCHHHHHHHHHH
Confidence 34456888999999999999986
No 181
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=20.97 E-value=1e+02 Score=22.62 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=28.5
Q ss_pred ccEEEEecCCCEEEEEEeCCHHHHHHHHHhhCCe
Q 036889 31 VDSITADLKEQKLIIIGDMDAVAIAKKLKKIGKI 64 (86)
Q Consensus 31 V~~v~vd~~~~~vtV~g~vd~~~l~~~l~k~G~a 64 (86)
...|++|.+.+.++|.+-+.-.+|.+++.+.|++
T Consensus 91 l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~ 124 (459)
T 2bvf_A 91 MNSIHIDTAGSRARIGGGVISGDLVKEAAKFGLA 124 (459)
T ss_dssp CCCEEEETTTTEEEEETTCBHHHHHHHHHTTTEE
T ss_pred CCCEEECCCCCEEEECCCCCHHHHHHHHHHcCCE
Confidence 3445688888999999889999999999998864
No 182
>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B
Probab=20.89 E-value=79 Score=17.00 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=16.9
Q ss_pred HhccCCccEEEEecCCCEEEEE
Q 036889 25 AADIYGVDSITADLKEQKLIII 46 (86)
Q Consensus 25 l~~l~GV~~v~vd~~~~~vtV~ 46 (86)
|..++||+.|.+--.++.+-+.
T Consensus 7 lk~v~gI~rVti~K~~~~lf~i 28 (54)
T 3mcb_A 7 LRQVTGVTRVTIRKSKNILFVI 28 (54)
T ss_dssp CEECTTEEEEEEESSSSEEEEE
T ss_pred CEECCCEEEEEEEeCCCEEEEE
Confidence 4568999999998877766554
No 183
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=20.84 E-value=62 Score=21.01 Aligned_cols=27 Identities=37% Similarity=0.422 Sum_probs=21.9
Q ss_pred EeCCHHHHHHHHHhhCCeEEEEcCCCC
Q 036889 47 GDMDAVAIAKKLKKIGKIEIVSVGPAK 73 (86)
Q Consensus 47 g~vd~~~l~~~l~k~G~a~ivsv~~~~ 73 (86)
|.+|-..++++|++.||.-.++++...
T Consensus 223 G~id~~~~~~~L~~~gy~g~~~lE~~~ 249 (278)
T 1i60_A 223 GAIDLDAHLSALKEIGFSDVVSVELFR 249 (278)
T ss_dssp SSSCHHHHHHHHHHTTCCSEEEECCCC
T ss_pred CCCcHHHHHHHHHHcCCCceEEEEecC
Confidence 669999999999999986566676544
No 184
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=20.83 E-value=90 Score=22.59 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=29.5
Q ss_pred cCCccEE-EEecCCCEEEEEEeCCHHHHHHHHHhhCC
Q 036889 28 IYGVDSI-TADLKEQKLIIIGDMDAVAIAKKLKKIGK 63 (86)
Q Consensus 28 l~GV~~v-~vd~~~~~vtV~g~vd~~~l~~~l~k~G~ 63 (86)
+.+...+ ++|.+++.++|..-+.-.+|.+++.+.|+
T Consensus 67 l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl 103 (422)
T 2vfr_A 67 LAGLPSVVDVDTAARTVRVGGGVRYAELARVVHARGL 103 (422)
T ss_dssp STTSCCCEEEETTTTEEEEETTCBHHHHHHHHHHTTE
T ss_pred hhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHcCC
Confidence 3344444 67888999999988999999999999986
No 185
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=20.79 E-value=96 Score=20.62 Aligned_cols=25 Identities=24% Similarity=0.236 Sum_probs=20.2
Q ss_pred EecCCCEEEEEEeCCHHHHHHHHHh
Q 036889 36 ADLKEQKLIIIGDMDAVAIAKKLKK 60 (86)
Q Consensus 36 vd~~~~~vtV~g~vd~~~l~~~l~k 60 (86)
.=+.+|+++++|.-+.+++..++++
T Consensus 153 lIF~SGKiviTGaks~~~~~~A~~~ 177 (188)
T 2z8u_A 153 LIFGSGKVVITGLKSEEDAKRALKK 177 (188)
T ss_dssp EECTTSEEEEESCSCHHHHHHHHHH
T ss_pred EEeCCCEEEEEecCCHHHHHHHHHH
Confidence 3467899999998888888877765
No 186
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=20.76 E-value=1.1e+02 Score=16.18 Aligned_cols=36 Identities=19% Similarity=-0.046 Sum_probs=21.6
Q ss_pred EEEEEeecccHhHHHHH---HHHHhccCCccEEEEecCC
Q 036889 5 VVLKMMTMNDEKTKQKA---IEAAADIYGVDSITADLKE 40 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI---~kal~~l~GV~~v~vd~~~ 40 (86)
+.+..-.-.|+.|..-. .+....++|+.-+.+|.+.
T Consensus 19 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~ 57 (104)
T 2e0q_A 19 AVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDE 57 (104)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTT
T ss_pred EEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCC
Confidence 44555467899996432 3444455666666776543
No 187
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=20.04 E-value=1.6e+02 Score=21.30 Aligned_cols=52 Identities=15% Similarity=-0.024 Sum_probs=33.3
Q ss_pred ceEEEEEEeecccHhHHHHHHHHHhccCCccEEEEecCCCE-----------------EEEEEe---CCHHHHHHHHH
Q 036889 2 ARMVVLKMMTMNDEKTKQKAIEAAADIYGVDSITADLKEQK-----------------LIIIGD---MDAVAIAKKLK 59 (86)
Q Consensus 2 ~~~vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~~~~~-----------------vtV~g~---vd~~~l~~~l~ 59 (86)
|++++| ++-|==|. +..+.+++||.++.+-...|. |.|..+ ++-++|++..-
T Consensus 2 ~~~a~f---agGCFWg~---E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 2 MAEIYL---AGGCFWGL---EEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CEEEEE---ECSCHHHH---HHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ccEEEE---ecCCchhh---HHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 455544 45666665 555667899999988665553 555554 66666666554
No 188
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=20.00 E-value=1.3e+02 Score=16.86 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=20.3
Q ss_pred EEEEEeecccHhHHHHHHHHHhccCCccEEEEec
Q 036889 5 VVLKMMTMNDEKTKQKAIEAAADIYGVDSITADL 38 (86)
Q Consensus 5 vvlkV~~m~C~~C~~kI~kal~~l~GV~~v~vd~ 38 (86)
++|-- .-.|+.| .+++..|..+ |+.--.+|.
T Consensus 24 v~ly~-~~~Cp~C-~~ak~~L~~~-~i~y~~vdI 54 (103)
T 3nzn_A 24 VIMYG-LSTCVWC-KKTKKLLTDL-GVDFDYVYV 54 (103)
T ss_dssp EEEEE-CSSCHHH-HHHHHHHHHH-TBCEEEEEG
T ss_pred EEEEc-CCCCchH-HHHHHHHHHc-CCCcEEEEe
Confidence 34433 3589999 7788888876 666444443
Done!