Query 036892
Match_columns 447
No_of_seqs 133 out of 1208
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 10:32:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h3n_X Glycerol kinase; ATP-bi 100.0 7.3E-75 2.5E-79 615.3 38.1 407 4-443 56-498 (506)
2 2p3r_A Glycerol kinase; glycer 100.0 7.7E-75 2.6E-79 615.7 36.7 408 4-444 54-497 (510)
3 3ezw_A Glycerol kinase; glycer 100.0 1.3E-74 4.4E-79 616.1 36.7 408 2-444 57-498 (526)
4 3g25_A Glycerol kinase; IDP007 100.0 1.9E-74 6.6E-79 611.4 37.0 407 4-443 57-499 (501)
5 3hz6_A Xylulokinase; xylulose, 100.0 5.2E-75 1.8E-79 617.1 31.8 395 4-442 56-502 (511)
6 3ifr_A Carbohydrate kinase, FG 100.0 1.2E-74 3.9E-79 614.1 34.2 393 4-442 58-495 (508)
7 3ll3_A Gluconate kinase; xylul 100.0 3.4E-74 1.2E-78 609.9 36.7 393 3-442 54-488 (504)
8 4e1j_A Glycerol kinase; struct 100.0 4.6E-74 1.6E-78 611.0 34.7 405 3-441 76-518 (520)
9 2w40_A Glycerol kinase, putati 100.0 4.5E-72 1.5E-76 593.5 36.9 407 4-442 55-502 (503)
10 2d4w_A Glycerol kinase; alpha 100.0 4.3E-72 1.5E-76 593.8 35.5 408 4-444 53-499 (504)
11 2dpn_A Glycerol kinase; thermu 100.0 2.1E-71 7.2E-76 587.3 35.0 407 4-445 53-494 (495)
12 2zf5_O Glycerol kinase; hypert 100.0 1.2E-71 4.2E-76 589.4 32.4 402 4-444 54-489 (497)
13 4bc3_A Xylulose kinase; transf 100.0 9.2E-72 3.1E-76 595.6 31.0 394 4-442 73-532 (538)
14 2itm_A Xylulose kinase, xylulo 100.0 4.6E-70 1.6E-74 575.4 33.6 391 4-442 51-482 (484)
15 3jvp_A Ribulokinase; PSI-II, N 100.0 9.7E-70 3.3E-74 583.9 30.0 394 4-440 68-539 (572)
16 3l0q_A Xylulose kinase; xlylul 100.0 3.1E-68 1.1E-72 570.3 30.3 394 4-444 56-541 (554)
17 3i8b_A Xylulose kinase; strain 100.0 2.7E-67 9.4E-72 558.1 29.8 372 3-422 50-496 (515)
18 2uyt_A Rhamnulokinase; rhamnos 100.0 1.3E-64 4.4E-69 534.4 23.3 385 3-437 58-486 (489)
19 3h6e_A Carbohydrate kinase, FG 100.0 4.2E-58 1.4E-62 483.6 22.9 363 3-438 55-470 (482)
20 1hux_A Activator of (R)-2-hydr 99.2 7.1E-11 2.4E-15 114.9 10.1 105 259-394 130-257 (270)
21 4ehu_A Activator of 2-hydroxyi 97.9 3.7E-05 1.2E-09 74.0 9.8 105 259-394 128-255 (276)
22 3h1q_A Ethanolamine utilizatio 97.6 0.00011 3.7E-09 70.3 8.5 153 185-391 118-272 (272)
23 2ews_A Pantothenate kinase; PA 97.6 0.00047 1.6E-08 67.2 12.3 110 255-391 136-286 (287)
24 2i7n_A Pantothenate kinase 1; 97.6 0.00041 1.4E-08 69.6 11.4 110 255-391 202-358 (360)
25 4b9q_A Chaperone protein DNAK; 97.1 0.0016 5.6E-08 69.8 11.0 83 293-400 305-388 (605)
26 3qfu_A 78 kDa glucose-regulate 96.4 0.0064 2.2E-07 60.9 8.2 76 293-393 315-392 (394)
27 3i33_A Heat shock-related 70 k 96.3 0.007 2.4E-07 61.0 7.9 77 294-395 324-402 (404)
28 4gni_A Putative heat shock pro 96.3 0.0078 2.7E-07 60.9 8.0 76 294-394 317-401 (409)
29 2gup_A ROK family protein; sug 95.7 0.31 1.1E-05 46.5 16.3 184 186-393 95-287 (292)
30 3eno_A Putative O-sialoglycopr 95.4 0.073 2.5E-06 52.7 10.4 84 292-401 221-311 (334)
31 2ivn_A O-sialoglycoprotein end 95.2 0.094 3.2E-06 51.7 10.5 84 292-401 216-306 (330)
32 1dkg_D Molecular chaperone DNA 95.2 0.036 1.2E-06 55.3 7.6 46 329-392 334-380 (383)
33 2v7y_A Chaperone protein DNAK; 94.8 0.042 1.4E-06 57.5 7.1 77 295-396 276-353 (509)
34 3vth_A Hydrogenase maturation 94.4 0.12 4E-06 56.8 9.7 78 292-395 665-749 (761)
35 4htl_A Beta-glucoside kinase; 94.3 1.6 5.6E-05 41.8 16.6 181 186-394 98-292 (297)
36 3d2f_A Heat shock protein homo 94.2 0.06 2.1E-06 58.4 6.9 78 295-397 308-386 (675)
37 4db3_A Glcnac kinase, N-acetyl 94.0 0.73 2.5E-05 45.0 13.8 108 262-392 217-325 (327)
38 1jce_A ROD shape-determining p 94.0 0.034 1.2E-06 54.7 4.0 45 330-392 279-324 (344)
39 3qbx_A Anhydro-N-acetylmuramic 93.9 0.39 1.3E-05 48.1 11.5 103 292-422 257-366 (371)
40 3r8e_A Hypothetical sugar kina 93.9 1.1 3.7E-05 43.5 14.7 181 186-393 119-319 (321)
41 3ttc_A HYPF, transcriptional r 93.8 0.18 6.3E-06 54.2 9.5 110 258-393 503-651 (657)
42 4g9i_A Hydrogenase maturation 93.6 0.1 3.6E-06 57.3 7.4 81 292-398 677-764 (772)
43 3vgl_A Glucokinase; ROK family 93.4 2.7 9.3E-05 40.6 16.5 186 186-395 97-314 (321)
44 1yuw_A Heat shock cognate 71 k 93.1 0.12 4.2E-06 54.5 6.8 50 329-396 331-382 (554)
45 3vov_A Glucokinase, hexokinase 93.1 2.6 9E-05 40.4 15.8 183 186-394 99-296 (302)
46 3ven_A O-carbamoyltransferase 92.7 0.36 1.2E-05 51.2 9.4 80 292-397 279-361 (576)
47 2ap1_A Putative regulator prot 92.4 2 7E-05 41.4 14.0 38 186-224 121-164 (327)
48 2kho_A Heat shock protein 70; 92.2 0.099 3.4E-06 55.9 4.5 51 328-396 333-384 (605)
49 2ych_A Competence protein PILM 92.0 0.35 1.2E-05 47.8 8.1 62 292-377 275-337 (377)
50 2aa4_A Mannac kinase, putative 91.9 1.3 4.5E-05 41.9 11.7 179 186-392 97-287 (289)
51 2qm1_A Glucokinase; alpha-beta 91.4 5.2 0.00018 38.3 15.6 38 186-224 109-152 (326)
52 2yhw_A Bifunctional UDP-N-acet 90.8 7.2 0.00025 37.8 16.1 38 186-224 132-175 (343)
53 3cqy_A Anhydro-N-acetylmuramic 90.6 0.8 2.7E-05 45.8 8.9 83 292-403 264-353 (370)
54 1z6r_A MLC protein; transcript 89.9 9.8 0.00033 37.8 16.5 182 186-391 187-391 (406)
55 4a2a_A Cell division protein F 88.2 0.37 1.3E-05 49.1 4.5 62 293-378 294-360 (419)
56 2zgy_A Plasmid segregation pro 87.6 0.7 2.4E-05 44.8 6.0 43 329-391 273-319 (320)
57 1z05_A Transcriptional regulat 87.1 14 0.00049 37.0 15.7 38 186-224 209-252 (429)
58 3en9_A Glycoprotease, O-sialog 86.0 3.3 0.00011 43.3 10.5 117 259-401 158-310 (540)
59 3htv_A D-allose kinase, alloki 84.3 21 0.00073 34.1 14.7 24 23-47 9-32 (310)
60 1saz_A Probable butyrate kinas 82.8 2.3 7.7E-05 42.5 7.1 46 296-347 269-315 (381)
61 2hoe_A N-acetylglucosamine kin 81.8 5 0.00017 39.7 9.3 41 186-227 189-233 (380)
62 2e2o_A Hexokinase; acetate and 81.3 4.6 0.00016 38.3 8.5 73 297-394 216-288 (299)
63 2q2r_A Glucokinase 1, putative 76.5 44 0.0015 32.6 14.3 82 297-393 281-371 (373)
64 2fsj_A Hypothetical protein TA 71.8 9.6 0.00033 37.3 7.9 66 298-391 272-342 (346)
65 2yhx_A Hexokinase B; transfera 71.6 8.9 0.0003 39.4 7.8 25 371-395 420-444 (457)
66 4apw_A ALP12; actin-like prote 68.5 12 0.00041 36.3 7.7 72 294-392 251-323 (329)
67 1cza_N Hexokinase type I; stru 64.6 6.5 0.00022 44.0 5.5 32 189-220 203-236 (917)
68 2ch5_A NAGK protein; transfera 61.7 27 0.00092 33.5 8.8 33 186-220 102-134 (347)
69 3o8m_A Hexokinase; rnaseh-like 59.5 19 0.00064 37.3 7.4 83 294-396 377-472 (485)
70 2f9w_A Pantothenate kinase; CO 56.2 41 0.0014 31.9 8.7 116 194-339 123-243 (271)
71 3mcp_A Glucokinase; structural 53.9 1.7E+02 0.0058 28.7 13.4 148 186-347 109-278 (366)
72 1bdg_A Hexokinase; phosphotran 52.3 22 0.00074 36.3 6.5 35 186-220 186-224 (451)
73 1sz2_A Glucokinase, glucose ki 50.7 50 0.0017 31.6 8.6 24 371-394 304-327 (332)
74 2fxu_A Alpha-actin-1, actin, a 45.2 8.9 0.0003 37.8 2.2 46 329-392 294-348 (375)
75 1zbs_A Hypothetical protein PG 38.7 44 0.0015 31.3 6.0 32 187-219 90-121 (291)
76 1zc6_A Probable N-acetylglucos 33.6 20 0.00068 34.0 2.6 32 186-218 102-133 (305)
77 1woq_A Inorganic polyphosphate 32.5 1.2E+02 0.0043 27.7 7.9 45 329-393 215-261 (267)
78 3epq_A Putative fructokinase; 32.3 67 0.0023 30.4 6.1 41 186-227 98-144 (302)
79 2h3g_X Biosynthetic protein; p 29.4 56 0.0019 30.7 4.9 70 291-393 183-252 (268)
80 1cza_N Hexokinase type I; stru 29.2 64 0.0022 36.0 6.0 33 189-221 651-685 (917)
81 3f9m_A Glucokinase; hexokinase 28.2 91 0.0031 31.9 6.5 36 186-221 201-238 (470)
82 3djc_A Type III pantothenate k 28.0 75 0.0026 29.8 5.5 42 291-339 185-228 (266)
83 3js6_A Uncharacterized PARM pr 22.8 1.2E+02 0.004 29.6 6.0 75 295-394 261-337 (355)
84 1zxo_A Conserved hypothetical 21.2 20 0.00067 33.8 -0.1 37 187-224 88-125 (291)
85 3bex_A Type III pantothenate k 21.0 1.1E+02 0.0036 28.4 5.0 41 291-339 181-221 (249)
No 1
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=7.3e-75 Score=615.32 Aligned_cols=407 Identities=41% Similarity=0.680 Sum_probs=358.1
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCC-CcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKST-GCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPI 80 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~-g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~ 80 (447)
.+.++++++.+ .++++++ |.+||||+|+|++++||+ + |+|++|+|+|+|+|+.++++++.. ...+.++++||+++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~-I~~Igis~~~~~~v~~D~-~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~ 133 (506)
T 3h3n_X 56 SVQSVIAGAFIESGIRPEA-IAGIGITNQRETTVVWDK-TTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVI 133 (506)
T ss_dssp HHHHHHHHHHHHHTCCGGG-EEEEEEEECSSCBEEEET-TTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHcCCChhh-eEEEEeeCCcccEEEEeC-CCCeECCCceEecCcchHHHHHHHHhccCHHHHHHHhCCCC
Confidence 34444444432 3566778 999999999999999998 6 999999999999999999986642 45688999999999
Q ss_pred CcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCC
Q 036892 81 STCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGI 160 (447)
Q Consensus 81 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi 160 (447)
++.++++||+|+++|+|+++++++++.++|++++|||.|+|||+ .++++|+|+||+|+|||+++++|++++|+.+||
T Consensus 134 ~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi 210 (506)
T 3h3n_X 134 DAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDG---QVHVTDYSNASRTMLYNIHKLEWDQEILDLLNI 210 (506)
T ss_dssp CTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTT---SCCEEEHHHHHTTTSEETTTTEECHHHHHHTTC
T ss_pred CchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCC---ceeeeEHHHhhhhhCeecCCCCcCHHHHHHcCc
Confidence 99999999999999999999999977777999999999999993 137999999999999999999999999999999
Q ss_pred CCCCCCCcccCCceeeeeccCC-CCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceee
Q 036892 161 PAEILPKTFSNSEIIGKLGKGW-PITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLST 238 (447)
Q Consensus 161 ~~~~lP~i~~~g~~iG~l~~g~-l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~ 238 (447)
++++||+++++++++|+++... +.+|+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++++++.+
T Consensus 211 ~~~~LP~i~~~~~~~G~~~~~~~lg~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 290 (506)
T 3h3n_X 211 PSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTT 290 (506)
T ss_dssp CGGGCCEEECSEEEEEECCGGGTTTCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSCCTTSEEE
T ss_pred CHHHCCceecCCCcceeeChHHhcCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccCCCceEEE
Confidence 9999999999999999996431 23799999999999999999999 999999999999987766655565566677777
Q ss_pred eccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC---------------------------
Q 036892 239 LAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQG--------------------------- 291 (447)
Q Consensus 239 ~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g--------------------------- 291 (447)
++|.++ .++.|.++|+++++|.+++|+++.++...+|+++++++.++|+++
T Consensus 291 ~~~~~~--g~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl 368 (506)
T 3h3n_X 291 IGYGIN--GKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGL 368 (506)
T ss_dssp EEEEET--TEEEEEEEEEECCSSHHHHHHHHTSCCCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECC
T ss_pred eeeecC--CCCEEEEecchhhHHHHHHHHHHHcCCCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEcc
Confidence 777641 123799999999999999999999887667899999998876421
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhh
Q 036892 292 ----SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSA 367 (447)
Q Consensus 292 ----~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~A 367 (447)
+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ | |+|
T Consensus 369 ~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~------~~~i~~~GGga~s~~~~-Q-----------------i~A 424 (506)
T 3h3n_X 369 TRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGID------IPLLKVDGGAAKNDLLM-Q-----------------FQA 424 (506)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC------CCEEEEESGGGGCHHHH-H-----------------HHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCEEEEecccccCHHHH-H-----------------HHH
Confidence 8999999999999999999999998766887 89999999999999999 9 999
Q ss_pred hccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhhhh
Q 036892 368 DLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRKKKAESWCRAVERIFNLA 443 (447)
Q Consensus 368 dvl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 443 (447)
|++|+||.++...|++|+|||++|++++|.|+|++++. ++++ ..++|+|+++.+.+.++|++|+++++++.+|.
T Consensus 425 Dv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~~~-~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 498 (506)
T 3h3n_X 425 DILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELK-SMAE-EGQMFTPEMPAEERDNLYEGWKQAVAATQTFK 498 (506)
T ss_dssp HHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHHH-TTCC-CCCEECCCSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHHH-HhcC-CCeEECCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999974 4555 57899999998776689999999999999984
No 2
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=7.7e-75 Score=615.67 Aligned_cols=408 Identities=42% Similarity=0.690 Sum_probs=359.3
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCC-CcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKST-GCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPI 80 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~-g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~ 80 (447)
++.++++++.+ .++++++ |.+||||+|||++|+||+ + |+|++|+|+|+|+|+.++++++.. ...+.++++||+++
T Consensus 54 ~~~~~i~~~~~~~~~~~~~-I~~Igis~~~~~~v~~D~-~~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~ 131 (510)
T 2p3r_A 54 TQSSTLVEVLAKADISSDQ-IAAIGITNQRETTIVWEK-ETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVI 131 (510)
T ss_dssp HHHHHHHHHHHHTTCCGGG-EEEEEEEECSSCBEEEET-TTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHHcCCChhh-eEEEEEeCCcCcEEEEEC-CCCeECcccccccCccHHHHHHHHHhcccHHHHHHHhCCCC
Confidence 44455555433 4566778 999999999999999999 6 999999999999999999986642 45788999999999
Q ss_pred CcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCC
Q 036892 81 STCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGI 160 (447)
Q Consensus 81 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi 160 (447)
++.++++||+|+++|+|+++++++++.++|++++|||.|+|||+ .++++|+|+||+|+|||+++++|++++|+.+||
T Consensus 132 ~~~~~~~kl~Wl~~~~pe~~~~~~~~~~l~~~~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi 208 (510)
T 2p3r_A 132 DPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDI 208 (510)
T ss_dssp STTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTT---SCCEEEHHHHHTTSSEETTTTEECHHHHHHHTC
T ss_pred CcccHHHHHHHHHHcCHHHHHHHhcCCeEecCHHHHHHHHhcCC---CeEEeehhHhhhhccccCccCCCCHHHHHHhCC
Confidence 99999999999999999999999977777889999999999993 247899999999999999999999999999999
Q ss_pred CCCCCCCcccCCceeeeeccCCC-CCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceee
Q 036892 161 PAEILPKTFSNSEIIGKLGKGWP-ITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLST 238 (447)
Q Consensus 161 ~~~~lP~i~~~g~~iG~l~~g~l-~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~ 238 (447)
++++||+++++++++|++....+ ++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++++++.+
T Consensus 209 ~~~~LP~i~~~~~~~G~~~~~~lG~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 288 (510)
T 2p3r_A 209 PREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTT 288 (510)
T ss_dssp CGGGCCEEECSEEEEEEECTTCTTSCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEE
T ss_pred CHHHCCceecCCCceeeechhhcCCCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCccccCCCCeeEE
Confidence 99999999999999999964324 7899999999999999999999 999999999999987666655666667777777
Q ss_pred eccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC---------------------------
Q 036892 239 LAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQG--------------------------- 291 (447)
Q Consensus 239 ~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g--------------------------- 291 (447)
++|.+. .++.|.++|+++++|.+++|+++.++...+|+++++++.++|+.+
T Consensus 289 ~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl 366 (510)
T 2p3r_A 289 IACGPT--GEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGL 366 (510)
T ss_dssp EEECTT--SCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEE
T ss_pred EeeecC--CCceEEEccchhhHHHHHHHHHHHccCCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECC
Confidence 777642 245899999999999999999999887667888999988765311
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhh
Q 036892 292 ----SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSA 367 (447)
Q Consensus 292 ----~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~A 367 (447)
+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ | |+|
T Consensus 367 ~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~------~~~i~~~GGga~s~~~~-Q-----------------i~A 422 (510)
T 2p3r_A 367 TRGVNANHIIRATLESIAYQTRDVLEAMQADSGIR------LHALRVDGGAVANNFLM-Q-----------------FQS 422 (510)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CSEEEEESGGGGCHHHH-H-----------------HHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------ccEEEEeCchhcCHHHH-H-----------------HHH
Confidence 8999999999999999999999998866887 89999999999999999 9 999
Q ss_pred hccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhhhhc
Q 036892 368 DLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRKKKAESWCRAVERIFNLAD 444 (447)
Q Consensus 368 dvl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 444 (447)
|++|+||.++...|++|+|||++|++++|.|+|++++ .++++ ..++|+|+++...+.++|++|+++|++..+|.+
T Consensus 423 Dv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~-~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 497 (510)
T 2p3r_A 423 DILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEKAV-IEREFRPGIETTERNYRYAGWKKAVKRAMAWEE 497 (510)
T ss_dssp HHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTCCC-EEEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred HHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHhcC-CCeEECCCCCHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999999999986 55665 578999998865555799999999999998854
No 3
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.3e-74 Score=616.11 Aligned_cols=408 Identities=43% Similarity=0.698 Sum_probs=352.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccc-cCChHHHHHHhCCCC
Q 036892 2 RVCMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGI-IWGKTHFLEAVGLPI 80 (447)
Q Consensus 2 ~~~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~-~~~~~~~~~~tG~~~ 80 (447)
++||++++++ .++++++ |+|||||+||+++|+||+++|+||+|+|+|+|+|+.++++++. ....+.++++||+++
T Consensus 57 ~~~i~~~l~~---~~~~~~~-I~aIgis~q~~~~v~~D~~~G~pl~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~ 132 (526)
T 3ezw_A 57 SSTLVEVLAK---ADISSDQ-IAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVI 132 (526)
T ss_dssp HHHHHHHHHH---HTCCGGG-EEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCS
T ss_pred HHHHHHHHHH---cCCChhh-EEEEEEeCCCCCEEEEECCCCeEcccceecCCcchHHHHHHHHhhccHHHHHHHhCCCC
Confidence 4556666555 3677888 9999999999999999974699999999999999999999664 356778999999999
Q ss_pred CcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCC
Q 036892 81 STCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGI 160 (447)
Q Consensus 81 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi 160 (447)
++.++++||+|+++|+|++++++++..+.+..+++||.|+|||+ ..+++|+|+||+|+|||+++++|++++++.+||
T Consensus 133 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~i~~~L~~~Lt~g---~~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi 209 (526)
T 3ezw_A 133 DPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDI 209 (526)
T ss_dssp STTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHHHHHHHTTT---SCCEEEHHHHTTSSSEETTTTEECHHHHHHHTC
T ss_pred CcccHHHHHHHHHHcCchHHHHHHHhhhhccchhHHHhhhhcCC---CceEEEchhhccccCcCccccCcCHHHHHHcCC
Confidence 99999999999999999999999987777889999999999974 267899999999999999999999999999999
Q ss_pred CCCCCCCcccCCceeeeeccCC-CCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceee
Q 036892 161 PAEILPKTFSNSEIIGKLGKGW-PITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLST 238 (447)
Q Consensus 161 ~~~~lP~i~~~g~~iG~l~~g~-l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~ 238 (447)
++++||+++++++++|++.... +..|+||++|+||++++++|+|+ ++|++.+++|||+++.+++++.+..++.++...
T Consensus 210 ~~~~LP~i~~~~~~~G~~~~~~~~~~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 289 (526)
T 3ezw_A 210 PREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTT 289 (526)
T ss_dssp CGGGCCEEECSEEEEEEECTTCTTSCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEE
T ss_pred CHHHCCCccccccccCccchhhhcCCCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCCccccccccceee
Confidence 9999999999999999996432 45799999999999999999999 999999999999998877754444444555444
Q ss_pred eccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC----------C-----------------
Q 036892 239 LAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ----------G----------------- 291 (447)
Q Consensus 239 ~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~----------g----------------- 291 (447)
..+.. ..++.|.++|+++++|.+++||++.++......+.+..+...+.. |
T Consensus 290 ~~~~~--~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Gl 367 (526)
T 3ezw_A 290 IACGP--TGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGL 367 (526)
T ss_dssp EEECT--TSCEEEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEE
T ss_pred eeecc--CCcceeeeHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecC
Confidence 33322 346689999999999999999999987654333333444333211 1
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhh
Q 036892 292 ----SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSA 367 (447)
Q Consensus 292 ----~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~A 367 (447)
+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ | |+|
T Consensus 368 t~~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~------~~~i~v~GGgaks~~~~-Q-----------------i~A 423 (526)
T 3ezw_A 368 TRGVNANHIIRATLESIAYQTRDVLEAMQADSGIR------LHALRVDGGAVANNFLM-Q-----------------FQS 423 (526)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CSEEEEESGGGGCHHHH-H-----------------HHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CCEEEEECchhhCHHHH-H-----------------HHH
Confidence 8999999999999999999999999878988 89999999999999999 9 999
Q ss_pred hccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhhhhc
Q 036892 368 DLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRKKKAESWCRAVERIFNLAD 444 (447)
Q Consensus 368 dvl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~~ 444 (447)
|+||+||.+++..|++|+|||++|++|+|.|+|++|+.+.+. ..++|+|+++++++|++|++|+++++|..+|.+
T Consensus 424 Dvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~~~~~--~~~~~~P~~~~~~~~~~y~~w~~av~r~~~w~~ 498 (526)
T 3ezw_A 424 DILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAV--IEREFRPGIETTERNYRYAGWKKAVKRAMAWEE 498 (526)
T ss_dssp HHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGSTTCCC--EEEEECCCSCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred HHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHHHhcC--CCeEEcCCCCHHHHHHHHHHHHHHHHHHhCchH
Confidence 999999999999999999999999999999999999865553 468999999999999999999999999888744
No 4
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.9e-74 Score=611.42 Aligned_cols=407 Identities=41% Similarity=0.708 Sum_probs=359.7
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCC-CcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKST-GCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPI 80 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~-g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~ 80 (447)
.+.++++++.+ .+.++++ |.+||||+|+|++++||+ + |+|++|+|+|+|+|+.++++++.. ...+.++++||+++
T Consensus 57 ~~~~~i~~~~~~~~~~~~~-I~~Igis~~~~~~v~~D~-~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~ 134 (501)
T 3g25_A 57 SVLAVMTEVINENDVRADQ-IAGIGITNQRETTVVWDK-HTGRPIYHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLL 134 (501)
T ss_dssp HHHHHHHHHHHTTTCCGGG-EEEEEEEECSSCEEEEET-TTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHhcCCCccc-EEEEEEECCcCcEEEEEC-CCCeECCCceeeccCChHHHHHHHHhccCHHHHHHHHCCCC
Confidence 45555665543 3566778 999999999999999999 7 999999999999999999986642 45688999999999
Q ss_pred CcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCC
Q 036892 81 STCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGI 160 (447)
Q Consensus 81 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi 160 (447)
++.++++||+|+++|+|+++++++++.++|++++|||.|+|||+ .++++|+|+||+|+|||+++++|++++|+.+||
T Consensus 135 ~~~~~~~kl~wl~~~~p~~~~~~~~~~~l~~~~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi 211 (501)
T 3g25_A 135 DPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTWLVWKLSGK---AAHITDYSNASRTLMFNIHDLEWDDELLELLTV 211 (501)
T ss_dssp STTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTT---SCCEEEHHHHTTSSSEETTTTEECHHHHHHHTC
T ss_pred CchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHHHHHHhcCC---CeeeeeHHHhhcccCeeCCCCCCCHHHHHHhCc
Confidence 99999999999999999999999976677889999999999993 147899999999999999999999999999999
Q ss_pred CCCCCCCcccCCceeeeecc-CCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceee
Q 036892 161 PAEILPKTFSNSEIIGKLGK-GWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLST 238 (447)
Q Consensus 161 ~~~~lP~i~~~g~~iG~l~~-g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~ 238 (447)
++++||+++++++++|+++. +.+.+|+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++.+++.+
T Consensus 212 ~~~~LP~i~~~~~~~G~~~~~~~~g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 291 (501)
T 3g25_A 212 PKNMLPEVKASSEVYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSESGLLTT 291 (501)
T ss_dssp CGGGCCEEECSEEEEEECCGGGTTTCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEE
T ss_pred CHHHCCceecCCCceeccchHHhCCCCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCCCCeEEE
Confidence 99999999999999999963 3234899999999999999999999 999999999999988777655666666677777
Q ss_pred eccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC---------------------------
Q 036892 239 LAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQG--------------------------- 291 (447)
Q Consensus 239 ~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g--------------------------- 291 (447)
++|.++ .+..|.++|+++++|.+++|+++.++...+|++++++++++|+++
T Consensus 292 ~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl 369 (501)
T 3g25_A 292 IAYGID--GKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGL 369 (501)
T ss_dssp EEEEET--TEEEEEEEEEESCSTHHHHHHHHTSCCCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEE
T ss_pred eeEecC--CccEEEEecccccHHHHHHHHHHHcCCCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEcc
Confidence 777642 123799999999999999999999876667899999998876531
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhh
Q 036892 292 ----SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSA 367 (447)
Q Consensus 292 ----~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~A 367 (447)
+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ | |+|
T Consensus 370 ~~~~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~------~~~i~~~GG~aks~~~~-Q-----------------i~A 425 (501)
T 3g25_A 370 TRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGID------VQSLRVDGGAVKNNFIM-Q-----------------FQA 425 (501)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCC------CSEEEEESGGGGCHHHH-H-----------------HHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CcEEEEecchhcCHHHH-H-----------------HHH
Confidence 8999999999999999999999998767887 89999999999999999 9 999
Q ss_pred hccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhhhh
Q 036892 368 DLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRKKKAESWCRAVERIFNLA 443 (447)
Q Consensus 368 dvl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 443 (447)
|++|+||.++...|++|+|||++|++++|.|+|++++ .++++ ..++|+|+++.+++.++|++|++++++..+|.
T Consensus 426 dv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~~~-~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~~~ 499 (501)
T 3g25_A 426 DIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKNWK-LEEKFDPKMDEGEREKLYRGWKKAVEATQVFK 499 (501)
T ss_dssp HHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHHCC-EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHhcc-CCeEECCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999987 44555 47899999998776689999999999998874
No 5
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=5.2e-75 Score=617.13 Aligned_cols=395 Identities=22% Similarity=0.250 Sum_probs=350.0
Q ss_pred HHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccc-cCChHHHHHHhCCCCCc
Q 036892 4 CMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGI-IWGKTHFLEAVGLPIST 82 (447)
Q Consensus 4 ~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~-~~~~~~~~~~tG~~~~~ 82 (447)
++.++++++.+.+.++++ |++||||+|++++|+||+ +|+||+|+|+|+|+|+.++++++. ..+.+.++++||+++++
T Consensus 56 ~~~~~i~~~~~~~~~~~~-I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~ 133 (511)
T 3hz6_A 56 AVQRIASSWWQSGVDARR-VSAIVLSGQMQNFLPLDQ-DHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTA 133 (511)
T ss_dssp HHHHHHHHHHTTTCCGGG-EEEEEEEECCSCBEEECT-TSCBSSCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCST
T ss_pred HHHHHHHHHHhcCCChhH-eEEEEEecccccEEEECC-CcCCCcCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCc
Confidence 455666665533566778 999999999999999999 899999999999999999998664 24567899999999999
Q ss_pred ccHHHHHHHHHhcChHHHHHHhcCCccccC-hhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCC
Q 036892 83 CFTAVKLLWMMENVDVVKEAIKKGDALFGT-IDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP 161 (447)
Q Consensus 83 ~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~-~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~ 161 (447)
.++++||+|+++|+|++|+++++ |++ ++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||+
T Consensus 134 ~~~~~kl~wl~~~~p~~~~~~~~----~l~~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 204 (511)
T 3hz6_A 134 ASILPKLVFWRASFPQAFGRLRH----VVLGAKDYVVLRLTG-----RHATDRTNASTTGLYRPKDDAWHVELLADYGFS 204 (511)
T ss_dssp TSHHHHHHHHHHHCHHHHTTCCE----EECSHHHHHHHHHHS-----CCEECHHHHHHTTCEETTTTEECHHHHHHTTCC
T ss_pred hhHHHHHHHHHHhChHHHHHHHH----HhcCcHHHHHHHHhC-----CceeeHhHhhcccceeCCCCCcCHHHHHHhCCC
Confidence 99999999999999999999885 999 99999999999 899999999999999999999999999999999
Q ss_pred CCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCcccccc-CC
Q 036892 162 AEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKS-KH 233 (447)
Q Consensus 162 ~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~-~~ 233 (447)
+++||+++++++++|+++ +| |++|+||++|+||++|+++|+|+ ++|++++++|||+++.++++.+|..+ +.
T Consensus 205 ~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~ 283 (511)
T 3hz6_A 205 LDLMPRLLEPGEQVGGVSALAARQTG-FVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPV 283 (511)
T ss_dssp GGGSCEECCTTSEEEECCHHHHHHHC-CCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCS
T ss_pred HHHCCCCcCCCCcccccCHHHHHhhC-CCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCC
Confidence 999999999999999994 58 88999999999999999999999 99999999999999987773267766 66
Q ss_pred CceeeeccccCCCCCCceeecccccchHHHHHHHHHHcC--CCCCHHHHHHHHHhcCCC---C-----------------
Q 036892 234 ELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLG--VISSASEIEELALQVHKQ---G----------------- 291 (447)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~--~~~~~~~l~~~a~~~~~~---g----------------- 291 (447)
+.+.+++|. .|+.|.+.|+++++|.+++|+++.++ ...+|++|+++++++|++ .
T Consensus 284 ~~~~~~~~~----~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~ 359 (511)
T 3hz6_A 284 GTIFRLAGI----IAGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVE 359 (511)
T ss_dssp SCCEEECSS----STTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSC
T ss_pred CceEEEEEe----cCCceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCC
Confidence 777667764 36776666899999999999999987 555799999998876543 1
Q ss_pred ---------------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCc
Q 036892 292 ---------------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPF 356 (447)
Q Consensus 292 ---------------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~ 356 (447)
+++||+||++|||+|++|++++.|++ |. +++|+++||+++|++|+ |
T Consensus 360 d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l~~--g~-------~~~i~~~GGga~s~~~~-Q--------- 420 (511)
T 3hz6_A 360 LPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELLGM--EK-------VGLLKVVGGGARSEAWL-R--------- 420 (511)
T ss_dssp BSSCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHTG--GG-------CCEEEEESGGGGCHHHH-H---------
T ss_pred CCccceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc--CC-------CCEEEEeCchhcCHHHH-H---------
Confidence 89999999999999999999999976 53 37899999999999999 9
Q ss_pred cccccchhhhhhccCCce-eecCCCCccHHHHHHHHHHhcCCCCCHHHHhccc---ccCCCcEEeCCCCHHHHH-HHHHH
Q 036892 357 LSFSYFECRSADLLGSPV-IRPADIETTALGAAFAAGLAIGVFKEEEIFASGE---RTKTSTTFKPVLNEEFRK-KKAES 431 (447)
Q Consensus 357 ~~~~~~~~~~Advl~~pV-~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~---~~~~~~~~~P~~~~~~~~-~~y~~ 431 (447)
|+||++|+|| +++...|++|+|||++|++++|.+++++++++++ ++ ..++|+|++++++.| ++|++
T Consensus 421 --------i~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~~~y~~~y~~ 491 (511)
T 3hz6_A 421 --------MIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADLREP-ASNILHPQPCDEGRRRRKFER 491 (511)
T ss_dssp --------HHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHTC----CCCBCCCCCCHHHHHHHHHH
T ss_pred --------HHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhccCC-CCeEECcCHHHHHHHHHHHHH
Confidence 9999999999 9989999999999999999999999998777777 66 468999999988877 58999
Q ss_pred HHHHHHHHhhh
Q 036892 432 WCRAVERIFNL 442 (447)
Q Consensus 432 ~~~~~~~~~~~ 442 (447)
|+++|+.+..+
T Consensus 492 ~~~~~~~l~~~ 502 (511)
T 3hz6_A 492 FKQCVETLGRL 502 (511)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHhhh
Confidence 99999998765
No 6
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=1.2e-74 Score=614.06 Aligned_cols=393 Identities=20% Similarity=0.237 Sum_probs=350.2
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPIS 81 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~~ 81 (447)
++.++++++.+ .++++.+ |.+||||+|+|++|+||+ +|+|++|+|+|+|+|+.++++++.. .+.+.++++||++++
T Consensus 58 ~i~~~i~~~~~~~~~~~~~-I~~Igis~~~~~~v~~D~-~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~ 135 (508)
T 3ifr_A 58 NARAVLAELKTTAGESDWR-PGGICVTGMLPAVVLLDD-RGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVT 135 (508)
T ss_dssp HHHHHHHHHHHHHCGGGCC-EEEEEEEECSSCBEEECT-TSCBCSCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSS
T ss_pred HHHHHHHHHHHhcCCChhh-eEEEEEECCCCcEEEECC-CCCCcccceeccccChHHHHHHHHhhccHHHHHHHHCCCCC
Confidence 45555555542 3566778 999999999999999999 8999999999999999999986642 466789999999999
Q ss_pred cccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCC
Q 036892 82 TCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP 161 (447)
Q Consensus 82 ~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~ 161 (447)
+.++++||+|+++|+|++|+++++ |++++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||+
T Consensus 136 ~~~~~~kl~wl~~~~p~~~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 206 (508)
T 3ifr_A 136 QQLVTAKLRWIERHEPAVFGAIAT----VCGSYDYINMLLTG-----ERVVDRNWALEGGFIDLASGTVEADLVALAHIP 206 (508)
T ss_dssp TTSHHHHHHHHHHHCHHHHHTCSE----EECHHHHHHHHHHC-----CCCEEHHHHHHHTCEETTTTEECHHHHHTTTSC
T ss_pred hhhHHHHHHHHHHcCHHHHHHHhh----hcCchHHHHHHhcC-----CccccHhHhhcccCccCccCCCCHHHHHHcCCC
Confidence 999999999999999999999986 88999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCC
Q 036892 162 AEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHE 234 (447)
Q Consensus 162 ~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~ 234 (447)
+++||+++++++++|+++ +| +++|+||++|+||++|+++|+|+ ++|++++++|||+++.+++ ++|..++.
T Consensus 207 ~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~~~~- 283 (508)
T 3ifr_A 207 PSAVPPAHPTHRVLGAVTAEAAALTG-LPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVAS-ATAKSDPR- 283 (508)
T ss_dssp GGGSCCEECTTSEEEECCHHHHHHHC-CCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECB-SCCCCBTT-
T ss_pred HHHCCCCcCCCCeeeccCHHHHHHhC-CCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeC-CCcccCCC-
Confidence 999999999999999995 58 88999999999999999999999 9999999999999998777 45655544
Q ss_pred ceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCC-C--CHHHHHHHHHhcCCCC--------------------
Q 036892 235 LLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVI-S--SASEIEELALQVHKQG-------------------- 291 (447)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~-~--~~~~l~~~a~~~~~~g-------------------- 291 (447)
+..+++. .|+.|.++|+++++|.+++|+++.++.. . +|++|++++++.+++.
T Consensus 284 -~~~~~~~----~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~ 358 (508)
T 3ifr_A 284 -LYLDYHL----VPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPF 358 (508)
T ss_dssp -BBCCBCS----STTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCC
T ss_pred -cceeeee----cCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCC
Confidence 3445543 4789999999999999999999988421 2 6899999998765421
Q ss_pred ------------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCcccc
Q 036892 292 ------------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSF 359 (447)
Q Consensus 292 ------------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~ 359 (447)
+++||+||++|||+|++|++++.|++ .|.+ +++|+++||+++|++|+ |
T Consensus 359 arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~-~g~~------~~~i~~~GGga~s~~~~-Q------------ 418 (508)
T 3ifr_A 359 ASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDD-IGHA------PQRFFASDGGTRSRVWM-G------------ 418 (508)
T ss_dssp CCCEEESCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-HTCC------CCEEEEESGGGGCHHHH-H------------
T ss_pred cCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-cCCC------CCEEEEeCCcccCHHHH-H------------
Confidence 79999999999999999999999986 5887 89999999999999999 9
Q ss_pred ccchhhhhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHH
Q 036892 360 SYFECRSADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVER 438 (447)
Q Consensus 360 ~~~~~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~ 438 (447)
|+||++|+||.+++..|++|+|||++|++++|.++|++++. ++++ ..++|+|++++++.| ++|++|+++|++
T Consensus 419 -----i~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~~~-~~~~~~P~~~~~~~y~~~y~~~~~~~~~ 491 (508)
T 3ifr_A 419 -----IMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT-ALVR-TGEKITPDPAKAEVYDRLYRDFSALYAT 491 (508)
T ss_dssp -----HHHHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGGG-GGSE-EEEEECCCGGGHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHHH-hhcC-CCeEECcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999885 4666 578999999988877 589999999999
Q ss_pred Hhhh
Q 036892 439 IFNL 442 (447)
Q Consensus 439 ~~~~ 442 (447)
+...
T Consensus 492 ~~~~ 495 (508)
T 3ifr_A 492 LHPF 495 (508)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 7
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=3.4e-74 Score=609.91 Aligned_cols=393 Identities=21% Similarity=0.282 Sum_probs=347.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCCC
Q 036892 3 VCMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPIS 81 (447)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~~ 81 (447)
+++.++++++.+. .. ++ |++||||+|+|++|+||+ +|+||+|+|+|+|+|+.++++++.. .+.+.++++||++++
T Consensus 54 ~~~~~~i~~~~~~-~~-~~-I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~ 129 (504)
T 3ll3_A 54 DAVQEIIFDLTQK-ID-GK-IAAISWSSQMHSLIGLGS-DDELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMH 129 (504)
T ss_dssp HHHHHHHHHHHHT-CS-SE-EEEEEEEECSSCBEEECT-TSCBSSCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSC
T ss_pred HHHHHHHHHHHHh-CC-CC-eEEEEEECCCCcEEEECC-CCCCcccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCC
Confidence 3556666666542 12 66 999999999999999999 9999999999999999999986642 456789999999999
Q ss_pred cccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCC
Q 036892 82 TCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP 161 (447)
Q Consensus 82 ~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~ 161 (447)
+.++++||+|+++|+|++|+++++ |++++|||.|+||| ++++|+|+||+|+|||+++++|++++|+.+||+
T Consensus 130 ~~~~~~kl~wl~~~~pe~~~~~~~----~~~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 200 (504)
T 3ll3_A 130 PMAPIYKLLWLKNKKTEVFSQAQK----WIGIKEYIIFRLTG-----KLVTDTTMAAGTGILNLKTLTWDQELLDILKIK 200 (504)
T ss_dssp TTSHHHHHHHHHHHCHHHHHHCCE----EECHHHHHHHHHHS-----CCEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCC
T ss_pred cccHHHHHHHHHHcChHHHHHHhh----eeCHHHHHHHHHhC-----CcccchhHhhcccCeeCCCCCcCHHHHHHcCCC
Confidence 999999999999999999999986 99999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCC
Q 036892 162 AEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHE 234 (447)
Q Consensus 162 ~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~ 234 (447)
+++||+++++++++|+++ +| +++|+||++|+||++|+++|+|+ ++|++++++|||+++.+++ ++|..++.+
T Consensus 201 ~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~~~~~ 278 (504)
T 3ll3_A 201 KEQLPKIAQPTKVIFPIKTEYVKKLG-IDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIV-DQPKIDPSA 278 (504)
T ss_dssp GGGSCEEECTTCEECCCCHHHHHHHT-CCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEE-SSCCCCTTC
T ss_pred HHHCCCeeCCcceeeccCHHHHHhcC-CCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeC-CCcccCCCC
Confidence 999999999999999995 58 88999999999999999999999 9999999999999998777 566655655
Q ss_pred ceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCC-CCHHHHHHHHHhcCCCC----------------------
Q 036892 235 LLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVI-SSASEIEELALQVHKQG---------------------- 291 (447)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~-~~~~~l~~~a~~~~~~g---------------------- 291 (447)
.+ ++|.. .++.|.++|+++++|.+++|+++.++.. ..++++.+++.++|++.
T Consensus 279 ~~--~~~~~---~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~ar 353 (504)
T 3ll3_A 279 SY--FCYPA---DKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANAR 353 (504)
T ss_dssp CS--EEEEE---ETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCC
T ss_pred ce--EEEEe---CCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccC
Confidence 44 45543 2578999999999999999999988653 24555555777776531
Q ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCcccccc
Q 036892 292 ----------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSY 361 (447)
Q Consensus 292 ----------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~ 361 (447)
+++||+||++|||+|++|++++.|++ .|.+ +++|+++||+++|++|+ |
T Consensus 354 g~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~------~~~i~~~GGga~s~~~~-Q-------------- 411 (504)
T 3ll3_A 354 GSFVGLTRMHQKPEMARAVIEGIIFNLYDAASNLIK-NTKK------PVAINATGGFLKSDFVR-Q-------------- 411 (504)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TSCC------CSEEEEESGGGCSHHHH-H--------------
T ss_pred eEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC------CCEEEEeCchhcCHHHH-H--------------
Confidence 89999999999999999999999987 4666 89999999999999999 9
Q ss_pred chhhhhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHh
Q 036892 362 FECRSADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIF 440 (447)
Q Consensus 362 ~~~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~ 440 (447)
|+||++|+||.+++..|++|+|||++|++++|.+++++++ .++++ ..++|+|++++++.| ++|++|+++|+++.
T Consensus 412 ---i~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~~~-~~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~ 486 (504)
T 3ll3_A 412 ---LCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSEI-GQFAQ-ADKVYFPNPKEAATYQKLFPLYCEIRNALA 486 (504)
T ss_dssp ---HHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGGG-GGTSC-EEEEECCCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ---HHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHHH-HHhcC-CCeEEccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999875 56766 578999999988877 58999999999988
Q ss_pred hh
Q 036892 441 NL 442 (447)
Q Consensus 441 ~~ 442 (447)
++
T Consensus 487 ~~ 488 (504)
T 3ll3_A 487 AS 488 (504)
T ss_dssp GG
T ss_pred HH
Confidence 74
No 8
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.6e-74 Score=610.99 Aligned_cols=405 Identities=42% Similarity=0.681 Sum_probs=349.7
Q ss_pred HHHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCC
Q 036892 3 VCMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPI 80 (447)
Q Consensus 3 ~~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~ 80 (447)
+.+.++++++.+ .+.++++ |.+|||++|++++|+||+++|+|++|+|+|+|.|+.++++++.. ...+.++++||+++
T Consensus 76 ~~i~~~i~~~~~~~~~~~~~-I~~Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~ 154 (520)
T 4e1j_A 76 QTVVSTVKEAIEKSGITAND-IAAIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLL 154 (520)
T ss_dssp HHHHHHHHHHHHTTTCCGGG-EEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHHhcCCCccc-EEEEEEeCCcceEEEEECCCCeECccccccccCCHHHHHHHHHhcccHHHHHHHHCCCC
Confidence 345566666543 3566778 99999999999999999328999999999999999999986642 45678999999999
Q ss_pred CcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCC
Q 036892 81 STCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGI 160 (447)
Q Consensus 81 ~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi 160 (447)
++.++++||+|+++|+|++|++++++.++|++++|||.|+|||. ..+++|+|+||+|+|||+++++|++++|+.+||
T Consensus 155 ~~~~~~~kl~Wl~~~~Pe~~~~~~~~~~~~~~~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi 231 (520)
T 4e1j_A 155 DPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTFLIWRLTGG---ECFCTDATNASRTLLYNIAENAWDDELTEVLRV 231 (520)
T ss_dssp STTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHHHHHHHTTT---CCCEEEHHHHTTSSSEETTTTEECHHHHHHHTC
T ss_pred CchhHHHHHHHHHHcChHHHHHHhcCCeEecCHHHHHHHHhcCC---CeeeecHHHhhhhcccccccCCCCHHHHHHcCC
Confidence 99999999999999999999999876667888999999999992 027999999999999999999999999999999
Q ss_pred CCCCCCCcccCCceeeeecc-CCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceee
Q 036892 161 PAEILPKTFSNSEIIGKLGK-GWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLST 238 (447)
Q Consensus 161 ~~~~lP~i~~~g~~iG~l~~-g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~ 238 (447)
++++||+++++++++|+++. | +++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++.+++.+
T Consensus 232 ~~~~LP~i~~~~~~~G~~~~~~-l~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~ 310 (520)
T 4e1j_A 232 PKEMLPEVKDCAADFGVTDPSL-FGAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTT 310 (520)
T ss_dssp CGGGSCEEECSBSCCCBCCHHH-HTSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEE
T ss_pred CHHHCCceecCCCceeeeChhh-CCCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCccccCCCceeeE
Confidence 99999999999999999963 4 67899999999999999999999 999999999999987766645666666777777
Q ss_pred eccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC-C--------------------------
Q 036892 239 LAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ-G-------------------------- 291 (447)
Q Consensus 239 ~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-g-------------------------- 291 (447)
++|.++ .++.|.++|+++++|.+++|+++.++...+|++++++++++|.. +
T Consensus 311 ~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl 388 (520)
T 4e1j_A 311 IAYRLD--GETTYALEGSIFVAGAAVQWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGM 388 (520)
T ss_dssp EEEEET--TEEEEEEEEEESCSHHHHHHHHHTTCCC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEE
T ss_pred EeEecC--CCceEEEcchHhhHHHHHHHHHHHcCCcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEecc
Confidence 777652 13479999999999999999999988766788999999887531 1
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhh---hcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchh
Q 036892 292 ----SQLHIARAVLESMCFQVKDVLDSLQKD---AVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFEC 364 (447)
Q Consensus 292 ----~~~~l~rAvlEgia~~~~~~l~~l~~~---~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~ 364 (447)
+++||+||++|||+|++|++++.|++. .| + +++|+++||+++|++|+ |
T Consensus 389 ~~~~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g-~------~~~i~~~GGgaks~~~~-Q----------------- 443 (520)
T 4e1j_A 389 TRNTGPAEFARAALEAVCYQTRDLLEAMHKDWRRNG-N------DTVLRVDGGMVASDWTM-Q----------------- 443 (520)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCEEEESGGGGCHHHH-H-----------------
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-C------cceEEEeCccccCHHHH-H-----------------
Confidence 899999999999999999999999875 47 6 79999999999999999 9
Q ss_pred hhhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHHHHHHHHHHHHHHHhh
Q 036892 365 RSADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRKKKAESWCRAVERIFN 441 (447)
Q Consensus 365 ~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~ 441 (447)
|+||++|+||++++..|++|+|||++|++++|.|+|++++. ++++ ..++|+|+++++++.++|++|++++++...
T Consensus 444 i~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~~-~~~~-~~~~~~P~~~~~~~~~~y~~~~~~~~~~~~ 518 (520)
T 4e1j_A 444 RLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFA-KSWA-RDRRFEPHMDEATRKVKLKGWRSAVKRTLI 518 (520)
T ss_dssp HHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHHH-HTCC-EEEEECCCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHHH-hhcC-CCeEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999985 4555 578999999988876899999999999754
No 9
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=4.5e-72 Score=593.52 Aligned_cols=407 Identities=36% Similarity=0.637 Sum_probs=353.5
Q ss_pred HHHHHHHHHHhC---CCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCC
Q 036892 4 CMAKALDKATAD---GHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLP 79 (447)
Q Consensus 4 ~i~~~~~~~~~~---~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~ 79 (447)
.+.++++++.+. ++..++ |.+|||++|+|++++||+++|+|++|+|.|+|.|+.++++++.. ...+.++++||++
T Consensus 55 ~i~~~i~~~~~~~~~~~~~~~-i~~Igis~~~~~~~~~D~~~G~~l~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~ 133 (503)
T 2w40_A 55 NLYNLMNEGIKVLKDKYTSVI-IKCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTY 133 (503)
T ss_dssp HHHHHHHHHHHHHHHHSSSCE-EEEEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHhhcCCCccc-eEEEEEcCCcceEEEEECCCCcCCccceeecccCcHHHHHHHHhccchHHHHHHhCCC
Confidence 344555554332 345677 99999999999999999933999999999999999999986642 2357889999999
Q ss_pred CCcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcC
Q 036892 80 ISTCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLG 159 (447)
Q Consensus 80 ~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lg 159 (447)
+++.++++||+|+++|+|+++++++++.++|++++|||.|+|||+ ++++|+|+||+|++||+++++|++++|+.+|
T Consensus 134 ~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~g 209 (503)
T 2w40_A 134 FNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKG----NCYTDVTNASRTLLMDINTLQWDEKMCKIFN 209 (503)
T ss_dssp CCSSSHHHHHHHHHHHCHHHHHHHHTTCEEEEEHHHHHHHHHHTS----CCEEEHHHHTTTTCBCTTTCSBCHHHHHHTT
T ss_pred CCcccHHHHHHHHHHhChHHHHHHhcCCeEEECHHHHHHHHHcCC----CccccHHHhhhhcCccCCCCccCHHHHHHcC
Confidence 999999999999999999999999987778999999999999993 4999999999999999999999999999999
Q ss_pred CC-CCCCCCcccCCceeeeeccCCCCC--CCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCc
Q 036892 160 IP-AEILPKTFSNSEIIGKLGKGWPIT--GIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHEL 235 (447)
Q Consensus 160 i~-~~~lP~i~~~g~~iG~l~~g~l~~--g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~ 235 (447)
|+ +++||+++++++++|+++...+.+ |+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++++.
T Consensus 210 i~~~~~lP~i~~~~~~~G~~~~~~~g~~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~ 289 (503)
T 2w40_A 210 ITNMSVLPEIKSNCSNFGLVKSEHVPDYLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGL 289 (503)
T ss_dssp CCCGGGSCEEECSEEEEEECCCTTSGGGTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSC
T ss_pred CChHHHCCCccCCcCceeeccHHHcCCCCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccccCCCCc
Confidence 99 999999999999999996431225 99999999999999999999 999999999999999877744566666677
Q ss_pred eeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC-C-----------------------
Q 036892 236 LSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ-G----------------------- 291 (447)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-g----------------------- 291 (447)
+..++|......++.|.++|+++++|.+++|+++ ++...+|++++++++++|+. |
T Consensus 290 ~~~~~~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~ 368 (503)
T 2w40_A 290 ITTICYKFNDNDKPKYALEGSIGTAGSGVSWLLK-NKLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASI 368 (503)
T ss_dssp EEEEEECCSTTSCCEEEEEEEESCSHHHHHHHHH-TTSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEE
T ss_pred eeEEEeecCCCCCceEEEechhhhhHhHHHHHHH-hCCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEE
Confidence 7777776410002389999999999999999999 88666789999998876531 1
Q ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCc-cEEEEeccccccHHHHHhhhhhcccCccccccch
Q 036892 292 -------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAK-FLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFE 363 (447)
Q Consensus 292 -------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~-~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~ 363 (447)
+++||+||++|||+|++|++++.|++..|.+ + ++|+++||+++|++|+ |
T Consensus 369 ~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~------~~~~i~~~GG~a~s~~~~-Q---------------- 425 (503)
T 2w40_A 369 YGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIE------MLHVLRCDGGMTKNKPFM-Q---------------- 425 (503)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS------CCSCEEEESGGGGCHHHH-H----------------
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------ccceEEEeCccccCHHHH-H----------------
Confidence 7999999999999999999999998766877 7 8999999999999999 9
Q ss_pred hhhhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhhh
Q 036892 364 CRSADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIFNL 442 (447)
Q Consensus 364 ~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 442 (447)
++||++|+||.++...|++|+|||++|++++|.|++++++.+.+++ ..++|+|++++ +.| ++|++|+++|++..+|
T Consensus 426 -~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~~-~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~ 502 (503)
T 2w40_A 426 -FNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLRR-SDAVFHSKMDD-KKRKKKTSEWNKAVERTLIQ 502 (503)
T ss_dssp -HHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHTC-EEEEECCCSCH-HHHHHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhccC-CCcEEccCCCH-HHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999998766555 46889999998 656 6899999999998765
No 10
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=4.3e-72 Score=593.81 Aligned_cols=408 Identities=45% Similarity=0.750 Sum_probs=355.4
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPIS 81 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~~ 81 (447)
.+.++++++.+ .++++++ |.+|||++|+|++++||+++|+|++|+|.|+|.|+.++++++.. .+.+.++++||++++
T Consensus 53 ~i~~~i~~~~~~~~~~~~~-i~~Igis~~g~~~v~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~ 131 (504)
T 2d4w_A 53 NVREVVGLALTRGNLTHED-IAAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLA 131 (504)
T ss_dssp HHHHHHHHHHHHTTCCGGG-EEEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSC
T ss_pred HHHHHHHHHHHHcCCCccc-EEEEEEeCCCCeEEEEECCCCCCccccceecccChHHHHHHHHhhcchHHHHHHhCCCCC
Confidence 44555555433 3556677 99999999999999999833999999999999999999986653 346789999999999
Q ss_pred cccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCc---eEeecchhhccccccCCCCCCChHHHhhc
Q 036892 82 TCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGL---HVTDVSNASRTMLMNLKTLDWDKPTLETL 158 (447)
Q Consensus 82 ~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~---~~~d~s~As~tgl~d~~~~~W~~~~l~~l 158 (447)
+.++++||+|+++|+|+++++++++.++|++++|||.|+|||+ .+ +++|+|+||+|++||+++++|++++|+.+
T Consensus 132 ~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~---~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~ 208 (504)
T 2d4w_A 132 TYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGG---TEGGVHVTDVTNASRTMLMDLDTLSWREDIAADM 208 (504)
T ss_dssp TTSHHHHHHHHHHHSTTHHHHHHHTCEEEECHHHHHHHHHTTT---TTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHT
T ss_pred chhHHHHHHHHHHcChhHHHHHhcCCeEEecHHHHHHHHhcCC---CcCCceeeehhhhhhhcCccCCCCccCHHHHHHh
Confidence 9999999999999999999999977777999999999999994 14 89999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCceeeeecc-CCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCce
Q 036892 159 GIPAEILPKTFSNSEIIGKLGK-GWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELL 236 (447)
Q Consensus 159 gi~~~~lP~i~~~g~~iG~l~~-g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~ 236 (447)
||++++||+++++++++|+++. ..+.+ +||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++++.+
T Consensus 209 gi~~~~lP~i~~~~~~~G~~~~~~~~G~-~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~ 287 (504)
T 2d4w_A 209 GIPLSMLPDIRSSSEVYGHGRPRGLVPG-VPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLL 287 (504)
T ss_dssp TCCGGGSCEEECSEEEEEECCTTSSSTT-CEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCCCCSSSCE
T ss_pred CCCHHHCCCccCCccceeccchHHhCCC-CeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccccCCCCcE
Confidence 9999999999999999999964 32225 9999999999999999999 9999999999999998777445666666777
Q ss_pred eeeccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC-C------------------------
Q 036892 237 STLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ-G------------------------ 291 (447)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-g------------------------ 291 (447)
.+++|..+. .++.|.++|+++++|.+++|+++.++...+|+++++++.++|+. |
T Consensus 288 ~~~~~~~~~-~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~ 366 (504)
T 2d4w_A 288 TTVCYKIGD-APAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALV 366 (504)
T ss_dssp EEEEECCTT-SCCEEEEEEEESCSHHHHHHHHHTTCTTTTCSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEE
T ss_pred EEEEEEcCC-CCceEEEcchhhhHHHHHHHHHHHhCCCCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCCEEEE
Confidence 777876410 12389999999999999999999887655678888888776531 1
Q ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhh
Q 036892 292 ------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECR 365 (447)
Q Consensus 292 ------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~ 365 (447)
+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ | |
T Consensus 367 Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~------~~~i~~~GG~a~s~~~~-Q-----------------i 422 (504)
T 2d4w_A 367 GLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVD------LTELRVDGGMVANELLM-Q-----------------F 422 (504)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC------CCEEEEESGGGGCHHHH-H-----------------H
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------cceEEEeCCcccCHHHH-H-----------------H
Confidence 8999999999999999999999998767877 89999999999999999 9 9
Q ss_pred hhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhhhhc
Q 036892 366 SADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIFNLAD 444 (447)
Q Consensus 366 ~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~~~ 444 (447)
+||++|+||.++...|++|+|||++|++++|.+++++++. .+.+ ..++|+|+++. +.| ++|++|+++|+++.+|.+
T Consensus 423 ~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~-~~~~-~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~~~ 499 (504)
T 2d4w_A 423 QADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI-DNWA-EDKRWSPSMES-GERERLYRNWKKAVTKTMEWVD 499 (504)
T ss_dssp HHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH-HHCC-EEEEECCCSCH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH-hhcC-CCeEEccCCCH-HHHHHHHHHHHHHHHHHhccch
Confidence 9999999999999999999999999999999999999985 4554 46889999998 656 689999999999988854
No 11
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-71 Score=587.29 Aligned_cols=407 Identities=44% Similarity=0.681 Sum_probs=354.4
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccccC-ChHHHHHHhCCCCC
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGIIW-GKTHFLEAVGLPIS 81 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~~-~~~~~~~~tG~~~~ 81 (447)
.+.++++++.+ .+++.++ |.+|||++|+|++++||+++|+|++|+|.|+|.|+.++++++... ..+.++++||++++
T Consensus 53 ~i~~~i~~~~~~~~~~~~~-i~~Igis~~~~~~~~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~ 131 (495)
T 2dpn_A 53 TTLWAAREVLRRAGAEAGE-VLALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFD 131 (495)
T ss_dssp HHHHHHHHHHHHTTCCGGG-CCEEEEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSC
T ss_pred HHHHHHHHHHHhcCCCccc-EEEEEEeCCCccEEEEECCCCcCCccceeecccChHHHHHHHHhccchhHHHHHhCCCCC
Confidence 44555555533 3556677 999999999999999998339999999999999999999976532 35688999999999
Q ss_pred cccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCC
Q 036892 82 TCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP 161 (447)
Q Consensus 82 ~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~ 161 (447)
+.++++||+|+++|+|++|++++++.++|++++|||.|+|||+ .++++|+|+||+|++||+++++|++++|+.+||+
T Consensus 132 ~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~---~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 208 (495)
T 2dpn_A 132 PYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGG---KVHATDPTNASRTLLFNLHTLAWDPELLEALGIP 208 (495)
T ss_dssp TTSHHHHHHHHHHHSSSHHHHHHHTCEEEECHHHHHHHHHTTT---SCCEECHHHHTTSSSEETTTTEECHHHHHHTTCC
T ss_pred chhHHHHHHHHHHcCHHHHHHHhcCCcEEECHHHHHHHHhcCC---CeEEEehHHhHhhcCccCccCCcCHHHHHHcCCC
Confidence 9999999999999999999999977777999999999999994 2589999999999999999999999999999999
Q ss_pred CCCCCCcccCCceeeeeccCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceeeec
Q 036892 162 AEILPKTFSNSEIIGKLGKGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLA 240 (447)
Q Consensus 162 ~~~lP~i~~~g~~iG~l~~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~ 240 (447)
+++||+++++++++|+++...+.+|+||++|++|++|+++|+|+ ++|++++++|||+++.++++++|..++++.+.+++
T Consensus 209 ~~~lP~i~~~~~~~G~~~~~~~G~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~ 288 (495)
T 2dpn_A 209 AALLPEVRPSDGDFGETLPELLGAPVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVA 288 (495)
T ss_dssp STTCCEECCTTSCCCBCCHHHHSSCCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEE
T ss_pred HHHCCCccCCCCeeEeccHHHcCCCCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCCCCceEEEE
Confidence 99999999999999999631111899999999999999999999 99999999999999887774456666667777777
Q ss_pred cccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC-C----------------------------
Q 036892 241 FKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ-G---------------------------- 291 (447)
Q Consensus 241 ~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-g---------------------------- 291 (447)
|..+ .++.|.++|+++++|.+++|+++ ++...+|++++++++++|+. |
T Consensus 289 ~~~~--~~~~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~ 365 (495)
T 2dpn_A 289 WSLG--GRATYALEGSLFVAGAAVGWLKE-VGLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTR 365 (495)
T ss_dssp EEET--TEEEEEEEEEESCSHHHHHHHHH-TTSSSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECT
T ss_pred EEcC--CCCEEEEechHHhHHHHHHHHHH-cCCccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEecCC
Confidence 7652 12489999999999999999999 88666788899998876531 1
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhc
Q 036892 292 --SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADL 369 (447)
Q Consensus 292 --~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Adv 369 (447)
+++||+||++||++|+++++++.|++..|.+ +++|+++||+++|++|+ | ++||+
T Consensus 366 ~~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~------~~~i~~~GG~a~n~~~~-q-----------------~~Adv 421 (495)
T 2dpn_A 366 GTSRAHLARAALEGVAFQVRDVVLAMEEEAGVR------LKVLKADGGMAQNRLFL-K-----------------IQADL 421 (495)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC------CCCEEEESGGGGCHHHH-H-----------------HHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------CcEEEEecccccCHHHH-H-----------------HHHHH
Confidence 8999999999999999999999998766877 78999999999999999 9 99999
Q ss_pred cCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhhhhcc
Q 036892 370 LGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIFNLADL 445 (447)
Q Consensus 370 l~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~~~~ 445 (447)
+|+||.++...|++|+|||++|++++|.+ +++++. .+.+ ..++|+|+++. +.| ++|++|+++|+++.+|.++
T Consensus 422 ~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~~-~~~~-~~~~~~P~~~~-~~y~~~~~~~~~~~~~~~~~~~~ 494 (495)
T 2dpn_A 422 LGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDVA-GRFR-EAERFLPTMPE-GRREALYRRWREAVERAKGWARE 494 (495)
T ss_dssp HTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHHH-HHCC-EEEEECCCSCH-HHHHHHHHHHHHHHHHHSSCSCC
T ss_pred hCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHHH-HhcC-CCeEEccCCCH-HHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999 999885 4444 46889999998 555 6899999999999888553
No 12
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.2e-71 Score=589.37 Aligned_cols=402 Identities=44% Similarity=0.681 Sum_probs=351.8
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccccCChHHHHHHhCCCCCc
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGIIWGKTHFLEAVGLPIST 82 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~~~~~~~~~~tG~~~~~ 82 (447)
.+.++++++.+ .+.++++ |++||||+|+|++++||+ +|+|++|+|+|+|.|+.++++++.....+.++++||.++++
T Consensus 54 ~~~~~i~~~~~~~~~~~~~-i~~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~ 131 (497)
T 2zf5_O 54 AQLRAIKDAIQSARIEPNQ-IAAIGVTNQRETTLVWDK-DGKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDA 131 (497)
T ss_dssp HHHHHHHHHHHHHTCCGGG-EEEEEEEECSSCEEEECT-TCCBSSCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred HHHHHHHHHHHhcCCCccc-EEEEEEecCCCcEEEECC-CCCCcccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCc
Confidence 34444554432 2466677 999999999999999999 99999999999999999999866422346789999999999
Q ss_pred ccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCCC
Q 036892 83 CFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPA 162 (447)
Q Consensus 83 ~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~~ 162 (447)
.++++||+|+++|+|+++++++++.++|++++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||++
T Consensus 132 ~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~ 206 (497)
T 2zf5_O 132 YFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTFLIYRLTG-----EHVTDYSNASRTMLFNIKKLDWDDELLELFDIPE 206 (497)
T ss_dssp TSHHHHHHHHHHHSTTHHHHHHTTCCEEEEHHHHHHHHHHS-----CCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCG
T ss_pred hhHHHHHHHHHHcCHHHHHHHhcCCCEEEcHHHHHHHHHhC-----CeeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCH
Confidence 99999999999999999999997777799999999999999 8999999999999999999999999999999999
Q ss_pred CCCCCcccCCceeeeeccCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceeeecc
Q 036892 163 EILPKTFSNSEIIGKLGKGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAF 241 (447)
Q Consensus 163 ~~lP~i~~~g~~iG~l~~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~ 241 (447)
++||+++++++++|+++...+.+|+||++|++|++|+++|+|+ ++|++++++|||+++.+++ ++|..++.+.+.+++|
T Consensus 207 ~~lP~i~~~~~~~G~~~~~~~g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~~~~~~~~~~~~ 285 (497)
T 2zf5_O 207 SVLPEVRESSEVYGYTKKELLGAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNT-DKMVLYSDNLLTTIAW 285 (497)
T ss_dssp GGCCEEECSEEEEEECCHHHHSSCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEE-ETCCCCCTTSEEEEEE
T ss_pred HHCCCcCCCCCeeeecCHHHcCCCCeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEEC-CCCccCCCCcEEEEEE
Confidence 9999999999999999632112899999999999999999999 9999999999999987777 4566666677777777
Q ss_pred ccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCC-C-----------------------------
Q 036892 242 KLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQ-G----------------------------- 291 (447)
Q Consensus 242 ~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~-g----------------------------- 291 (447)
..+ .++.|.++|+++++|.+++|+++.++...+|+++++++.++|+. +
T Consensus 286 ~~~--~~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~ 363 (497)
T 2zf5_O 286 GLN--GRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRG 363 (497)
T ss_dssp EET--TEEEEEEEEEESCSHHHHHHHHHTSCCCSCGGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTT
T ss_pred EcC--CCCEEEEechhhhHHHHHHHHHHHhCCCCcHHHHHHHHhhCCCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCC
Confidence 652 12489999999999999999999887666788899888876531 1
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc
Q 036892 292 -SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL 370 (447)
Q Consensus 292 -~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl 370 (447)
+++||+||++||++|++|++++.|++. + + +++|+++||+++|++|+ | ++||++
T Consensus 364 ~~~~~l~rAvlEgia~~~~~~l~~l~~~-~-~------~~~i~~~GG~a~s~~~~-Q-----------------i~Adv~ 417 (497)
T 2zf5_O 364 TGREHLARATLEAIAYLTRDVVDEMEKL-V-Q------IKELRVDGGATANDFLM-Q-----------------FQADIL 417 (497)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTT-S-C------CCCEEEESGGGGCHHHH-H-----------------HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhc-C-C------cceEEEeCccccCHHHH-H-----------------HHHhhc
Confidence 899999999999999999999999864 5 6 79999999999999999 9 999999
Q ss_pred CCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhhhhc
Q 036892 371 GSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIFNLAD 444 (447)
Q Consensus 371 ~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~~~ 444 (447)
|+||+++...|++|+|||++|++++|.+++++++. .+.+ ..++|+|+++. +.| ++|++|+++|+++.+|.+
T Consensus 418 g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~~-~~~~-~~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~~~ 489 (497)
T 2zf5_O 418 NRKVIRPVVKETTALGAAYLAGLAVDYWADTREIA-ELWK-AERIFEPKMDE-KTRERLYKGWKEAVKRAMGWAK 489 (497)
T ss_dssp TSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHHH-TTCC-EEEEECCCCCH-HHHHHHHHHHHHHHHTTTTGGG
T ss_pred CCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHHH-HhcC-CCeEECCCccH-HHHHHHHHHHHHHHHHHHhHhh
Confidence 99999999999999999999999999999999985 4554 46889999998 655 689999999999888843
No 13
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=9.2e-72 Score=595.62 Aligned_cols=394 Identities=15% Similarity=0.180 Sum_probs=347.4
Q ss_pred HHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCc--------------------ccccccccccCCcHHHHHc
Q 036892 4 CMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGC--------------------PLYNAIVWMDARNSSEIGE 63 (447)
Q Consensus 4 ~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~--------------------pl~~~i~W~D~R~~~~~~~ 63 (447)
++..+++.+.+.++++++ |++||||+|||++|+||+ +|+ ||+|+|+|+|+|+.+++++
T Consensus 73 ~~~~~~~~l~~~~~~~~~-I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~ 150 (538)
T 4bc3_A 73 ALDIILEKMKASGFDFSQ-VLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQ 150 (538)
T ss_dssp HHHHHHHHHHHTTCCGGG-EEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCChHH-eEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHHHHHHH
Confidence 444555555455677888 999999999999999999 875 9999999999999999986
Q ss_pred ccc-C-ChHHHHHHhCCCCCcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceE-eecchhhcc
Q 036892 64 GII-W-GKTHFLEAVGLPISTCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHV-TDVSNASRT 140 (447)
Q Consensus 64 ~~~-~-~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~-~d~s~As~t 140 (447)
+.. . ..+.++++||+++++.|+++||+|+++|+|++|+++++ |++++|||.|+||| +.+ +|+|+||+|
T Consensus 151 l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~----~~~~~d~l~~~LTG-----~~~~td~s~As~t 221 (538)
T 4bc3_A 151 LEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTER----ISLVSSFAASLFLG-----SYSPIDYSDGSGM 221 (538)
T ss_dssp HHHHHTSHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTEEE----EEEHHHHHHHHHHT-----SCCCCBHHHHTTS
T ss_pred HHHhhCcHHHHHHHHCCCCccccHHHHHHHHHHcCHHHHHHhhe----EEcHHHHHHHHHhC-----CCcccccchhhcc
Confidence 642 2 35789999999999999999999999999999999986 99999999999999 776 999999999
Q ss_pred ccccCCCCCCChHHHhhcCCC-CCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCCCCCcEEEE
Q 036892 141 MLMNLKTLDWDKPTLETLGIP-AEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQACKKGEVKST 213 (447)
Q Consensus 141 gl~d~~~~~W~~~~l~~lgi~-~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~~~g~~~~s 213 (447)
+|||+++++|++++|+.+|++ +++||+++++++++|+|+ +| +++|+||++|+||++++++|++.++|+++++
T Consensus 222 ~l~d~~~~~W~~~ll~~~gi~~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~~D~~aa~~g~~~~~g~~~~s 300 (538)
T 4bc3_A 222 NLLQIQDKVWSQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYG-FPPGCKVVAFTGDNPASLAGMRLEEGDIAVS 300 (538)
T ss_dssp SCEETTTTEECHHHHHHHCTTHHHHHCCCBCSSCEEEECCHHHHHHHC-CCTTCEEECCEEHHHHHHHHTTCCTTCEEEE
T ss_pred cccccccCCCCHHHHHHhCccHHHHCCCcccccccccccCHHHHHHhC-CCCCCeEEEecccHHhhhhccccCCCcEEEE
Confidence 999999999999999999998 789999999999999995 58 8899999999999999999994499999999
Q ss_pred ecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC--
Q 036892 214 YGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQG-- 291 (447)
Q Consensus 214 ~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g-- 291 (447)
+|||+++.+++ ++|..++.+. .++|.. .++.|..+++.+++|.+++|+++.++. .+|++|+++++++|++.
T Consensus 301 ~GTs~~~~~~~-~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~gg~~~~w~~~~~~~-~~~~~l~~~a~~~~~g~~g 373 (538)
T 4bc3_A 301 LGTSDTLFLWL-QEPMPALEGH--IFCNPV---DSQHYMALLCFKNGSLMREKIRNESVS-RSWSDFSKALQSTEMGNGG 373 (538)
T ss_dssp ESSSEEEEEEE-SSCCCCSSSE--EEEETT---EEEEEEEEEEESSSHHHHHHHHHHHST-TCHHHHHHHHHTSCTTGGG
T ss_pred eccchheEEec-CCCCCCCCcc--eEEeec---CCCCEEEeehhhccchHHHHHHHHhcC-CCHHHHHHHHhcCCCCCCC
Confidence 99999998777 4565555442 355532 245799999998999999999998864 57999999998876521
Q ss_pred -------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccc
Q 036892 292 -------------------------------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDA 340 (447)
Q Consensus 292 -------------------------------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~ 340 (447)
+++||+||++|||+|++|++++.|++ .+.+ +++|+++||+++
T Consensus 374 l~~lp~~~Ger~P~~~G~~~~~~~~~g~~~~~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~------~~~i~~~GGga~ 446 (538)
T 4bc3_A 374 NLGFYFDVMEITPEIIGRHRFNTENHKVAAFPGDVEVRALIEGQFMAKRIHAEGLGY-RVMS------KTKILATGGASH 446 (538)
T ss_dssp CEEEEESSCCSSSCCCEEEEECTTSCEESCCCHHHHHHHHHHHHHHHHHHHHHHTTC-CCCT------TCCEEEEEGGGG
T ss_pred eEEeecCCCCcCCCCCceeeeccccccccCCCHHHHHHHHHHHHHHHHHHHHHHhhh-cCCC------CCeEEEEcchhc
Confidence 57999999999999999999999976 5666 789999999999
Q ss_pred cHHHHHhhhhhcccCccccccchhhhhhccCCceeecCCCCccHHHHHHHHHHhcCC--CCCHHHHhcccccCCCcEEeC
Q 036892 341 NLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPADIETTALGAAFAAGLAIGV--FKEEEIFASGERTKTSTTFKP 418 (447)
Q Consensus 341 s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~--~~~~~~a~~~~~~~~~~~~~P 418 (447)
|++|+ | |+||++|+||+++...|++|+|||++|++++|. |++++++++.+++ ..++|+|
T Consensus 447 s~~~~-Q-----------------i~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~~-~~~~~~P 507 (538)
T 4bc3_A 447 NREIL-Q-----------------VLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAPN-PRLAATP 507 (538)
T ss_dssp CHHHH-H-----------------HHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSCC-CEEEECC
T ss_pred CHHHH-H-----------------HHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhcC-CCeeECC
Confidence 99999 9 999999999999999999999999999999998 8999999887776 5789999
Q ss_pred CCCHHHHH-HHHHHHHHHHHHHhhh
Q 036892 419 VLNEEFRK-KKAESWCRAVERIFNL 442 (447)
Q Consensus 419 ~~~~~~~~-~~y~~~~~~~~~~~~~ 442 (447)
++++++.| ++|++|+++|+++.+.
T Consensus 508 ~~~~~~~Y~~~y~~y~~l~~~~~~~ 532 (538)
T 4bc3_A 508 SPGASQVYEALLPQYAKLEQRILSQ 532 (538)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998877 5899999999998765
No 14
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=4.6e-70 Score=575.44 Aligned_cols=391 Identities=21% Similarity=0.270 Sum_probs=341.0
Q ss_pred HHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccccCChHHHHHHhCCCCCcc
Q 036892 4 CMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGIIWGKTHFLEAVGLPISTC 83 (447)
Q Consensus 4 ~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~~~~~~~~~~tG~~~~~~ 83 (447)
++.++++++.+. ..+++ |++||||+|+|++|+||+ +|+|++|+|.|+|.|+.++++++.... ..++++||+++++.
T Consensus 51 ~i~~~i~~~~~~-~~~~~-i~~Igis~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~-~~~~~~tG~~~~~~ 126 (484)
T 2itm_A 51 ATDRAMKALGDQ-HSLQD-VKALGIAGQMHGATLLDA-QQRVLRPAILWNDGRCAQECTLLEARV-PQSRVITGNLMMPG 126 (484)
T ss_dssp HHHHHHHHHHHH-SCCTT-CCEEEEEECSSCBEEECT-TCCBCSCEECTTCCTTHHHHHHHHHHC-TTHHHHHSSCCCTT
T ss_pred HHHHHHHHHHHh-CCccc-eEEEEEcCCcCcEEEECC-CcCCCcccceecccCcHHHHHHHHHhH-HHHHHHhCCCCCcc
Confidence 455666665432 23567 999999999999999999 899999999999999999998654211 23567899999999
Q ss_pred cHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCCCC
Q 036892 84 FTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAE 163 (447)
Q Consensus 84 ~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~~~ 163 (447)
++++||+|+++|+|++++++++ |+.++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||+++
T Consensus 127 ~~~~kl~wl~~~~P~~~~~~~~----~l~~~d~l~~~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~ 197 (484)
T 2itm_A 127 FTAPKLLWVQRHEPEIFRQIDK----VLLPKDYLRLRMTG-----EFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRD 197 (484)
T ss_dssp SHHHHHHHHHHHCHHHHTTCCE----EECHHHHHHHHHHS-----CCEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGG
T ss_pred cHHHHHHHHHHhChHHHHHHhh----eeCcHHHHHHHHhC-----CceeeHHHhhccccccCCCCCcCHHHHHHcCCCHH
Confidence 9999999999999999999986 88899999999999 89999999999999999999999999999999999
Q ss_pred CCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCce
Q 036892 164 ILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELL 236 (447)
Q Consensus 164 ~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~ 236 (447)
+||+++++++++|+++ +| ++ |+||++|+||++|+++|+|+ ++|++++++|||+++.+++ +.|..++.+.+
T Consensus 198 ~lp~i~~~~~~~G~~~~~~a~~~G-l~-g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~~~~~~~ 274 (484)
T 2itm_A 198 QMPALYEGSEITGALLPEVAKAWG-MA-TVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVS-EGFLSKPESAV 274 (484)
T ss_dssp GSCEEECTTSEEEECCHHHHHHHT-SC-CCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEEC-SSCCCCCSSSC
T ss_pred HCCCccCCcceeeccCHHHHHHhC-CC-CCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEec-CCCccCcccce
Confidence 9999999999999994 58 77 99999999999999999999 9999999999998876655 44544444344
Q ss_pred eeeccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCC-------------------------
Q 036892 237 STLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASEIEELALQVHKQG------------------------- 291 (447)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g------------------------- 291 (447)
..+++. .++.|.+++++.++|.+++|+++.++. .+|+++.+.+.+.+++.
T Consensus 275 ~~~~~~----~~g~~~~~~~~~~~G~~~~W~~~~~~~-~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~ 349 (484)
T 2itm_A 275 HSFCHA----LPQRWHLMSVMLSAASCLDWAAKLTGL-SNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVF 349 (484)
T ss_dssp EEEECS----STTCEEEEEEECCHHHHHHHHHHHTTC-CSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEE
T ss_pred EEeecc----cCCeeeeeehhhhHHHHHHHHHHhcCc-ccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEE
Confidence 445543 478999999999999999999998864 36888888887765421
Q ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchh
Q 036892 292 -------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFEC 364 (447)
Q Consensus 292 -------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~ 364 (447)
+++||+||++||++|++|++++.|++ .|.+ +++|+++||+++|++|+ |
T Consensus 350 ~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~-~g~~------~~~i~~~GG~a~s~~~~-Q----------------- 404 (484)
T 2itm_A 350 FGLTHQHGPNELARAVLEGVGYALADGMDVVHA-CGIK------PQSVTLIGGGARSEYWR-Q----------------- 404 (484)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC------CSCEEEESGGGCCHHHH-H-----------------
T ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC------cceEEEEeccccCHHHH-H-----------------
Confidence 79999999999999999999999986 5777 78999999999999999 9
Q ss_pred hhhhccCCceeecCCCCc-cHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhhh
Q 036892 365 RSADLLGSPVIRPADIET-TALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIFNL 442 (447)
Q Consensus 365 ~~Advl~~pV~~~~~~e~-~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~~~ 442 (447)
++||++|+||.+++..|. +|+|||++|++++|.+++++++.+.+ . ..++|+|++++++.| ++|++|+++++++..+
T Consensus 405 i~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~~~~~-~-~~~~~~P~~~~~~~y~~~y~~~~~~~~~~~~~ 482 (484)
T 2itm_A 405 MLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL-P-LEQSHLPDAQRYAAYQPRRETFRRLYQQLLPL 482 (484)
T ss_dssp HHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHHSCCC-C-EEEEECCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHHHHhc-C-CCeEECCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999896 99999999999999999999986654 3 467899999987777 6899999999998764
No 15
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=9.7e-70 Score=583.92 Aligned_cols=394 Identities=20% Similarity=0.231 Sum_probs=338.3
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCccccc-----------ccccccCCcHHHHHccccC-C--
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYN-----------AIVWMDARNSSEIGEGIIW-G-- 68 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~-----------~i~W~D~R~~~~~~~~~~~-~-- 68 (447)
++.++++++.+ .+.++++ |++||||+|||++|+||+ +|+||+| +|+|+|.|+.++++++... .
T Consensus 68 ~~~~~i~~~l~~~~~~~~~-I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~ 145 (572)
T 3jvp_A 68 VLTTSVPAVMKESGVDADD-VIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKR 145 (572)
T ss_dssp HHTTHHHHHHHC---CCSC-EEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhH-EEEEEEecCCCcEEEECC-CCCCCccCccccccccccceecCccchHHHHHHHHHhcccc
Confidence 44455555443 3566778 999999999999999999 9999998 8999999999999866421 1
Q ss_pred hHHHHHHhCCCCCcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCC
Q 036892 69 KTHFLEAVGLPISTCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTL 148 (447)
Q Consensus 69 ~~~~~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~ 148 (447)
.+.++++||+++++.|+++||+|+++|+|++|+++++ |++++|||.|+||| ++++|+|+||+|++|| +++
T Consensus 146 ~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d-~~~ 215 (572)
T 3jvp_A 146 GEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQ----FLEATDWIVSQMTG-----KIVKNSCTAGYKAIWH-KRE 215 (572)
T ss_dssp TCTTGGGGTTCCCSSSHHHHHHHHHHHHHHHHHHCSE----EEEHHHHHHHHHHS-----SCCEEHHHHHHHSCCB-TTT
T ss_pred HHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHhhe----EecHHHHHHHHhcC-----CceeehhhccccceeC-CCC
Confidence 3467889999999999999999999999999999986 99999999999999 8999999999999999 999
Q ss_pred CC-ChHHHhhcC-----CCCCCC-CCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhcCCC-CCCcEEEEe
Q 036892 149 DW-DKPTLETLG-----IPAEIL-PKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLGQAC-KKGEVKSTY 214 (447)
Q Consensus 149 ~W-~~~~l~~lg-----i~~~~l-P~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg~g~-~~g~~~~s~ 214 (447)
+| |+++|+.+| +++++| |+++++++++|+|+ +| |++|+||++|++|++|+++|+|+ ++|++++++
T Consensus 216 ~W~~~ell~~~g~~l~~i~~~~L~p~i~~~~~~~G~l~~~~A~~~G-L~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~ 294 (572)
T 3jvp_A 216 GYPSNEFFKALDPRLEHLTTTKLRGDIVPLGERAGGLLPEMAEKMG-LNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAM 294 (572)
T ss_dssp BSCCHHHHHTTCGGGTTSTTTTTCSCEECTTSEEEECCHHHHHHHT-SCTTCEEECCEETTTTHHHHTTCCSSEEEEEEE
T ss_pred CcCCHHHHHHhCcccccCCHhHCCCccCCcCccccccCHHHHHHhC-CCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEe
Confidence 99 999999998 456667 79999999999995 58 88999999999999999999999 999999999
Q ss_pred cccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCC-----------CCCHHHHHHH
Q 036892 215 GTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGV-----------ISSASEIEEL 283 (447)
Q Consensus 215 GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~-----------~~~~~~l~~~ 283 (447)
|||+++.+++ +.+...+ ++...+. ++..|+.|.++|++.++|.+++||++.+.. .+.|++|+++
T Consensus 295 GTs~~~~~~~-~~~~~~~-~~~~~~~---~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 369 (572)
T 3jvp_A 295 GTSICHMLLG-EKEQEVE-GMCGVVE---DGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEK 369 (572)
T ss_dssp SSSEEEEEEE-SSCCCCT-TCSEEEE---TSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHH
T ss_pred cchhheeeec-CCCccCC-Cceeecc---CccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHH
Confidence 9998776555 3333322 3322221 123578999999999999999999998852 1247899999
Q ss_pred HHhcCCCC--------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccE
Q 036892 284 ALQVHKQG--------------------------------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFL 331 (447)
Q Consensus 284 a~~~~~~g--------------------------------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~ 331 (447)
+++++++. +++||+||++|||+|++|++++.|++ .|.+ +++
T Consensus 370 a~~~~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~------~~~ 442 (572)
T 3jvp_A 370 ASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHG-RGVE------VHE 442 (572)
T ss_dssp HTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC------EEE
T ss_pred HHhCCCCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC------cCE
Confidence 98876531 89999999999999999999999987 6887 899
Q ss_pred EEEecccc-ccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCCCCccHHHHHHHHHHhcC----CCCCHHHHhc
Q 036892 332 LRVDGAID-ANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPADIETTALGAAFAAGLAIG----VFKEEEIFAS 406 (447)
Q Consensus 332 i~~~GG~s-~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g----~~~~~~~a~~ 406 (447)
|+++||++ +|++|+ | |+||++|+||.++...|++|+|||++|++++| .|++++++++
T Consensus 443 i~~~GGga~ks~~~~-Q-----------------i~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~e~~~ 504 (572)
T 3jvp_A 443 LYACGGLPQKNHLLM-Q-----------------IFADVTNREIKVAASKQTPALGAAMFASVAAGSEVGGYDSIEEAAK 504 (572)
T ss_dssp EEEESSHHHHCHHHH-H-----------------HHHHHHTSCEEEBCCSSHHHHHHHHHHHHHHCSSSSSCSCHHHHHH
T ss_pred EEEEcCchhhCHHHH-H-----------------HHHHHHCCeeEecCCCccHHHHHHHHHHHhcCCCccccCCHHHHHH
Confidence 99999999 999999 9 99999999999999999999999999999999 9999999987
Q ss_pred ccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHh
Q 036892 407 GERTKTSTTFKPVLNEEFRK-KKAESWCRAVERIF 440 (447)
Q Consensus 407 ~~~~~~~~~~~P~~~~~~~~-~~y~~~~~~~~~~~ 440 (447)
.+++...++|+|++++++.| ++|++|+++|+.+.
T Consensus 505 ~~~~~~~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 505 KMGRVKDETFKPIPEHVAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp HHCCBCSCCBCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCeEEeeCHHHHHHHHHHHHHHHHHHHHHh
Confidence 77653357899999998888 58999999998874
No 16
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=3.1e-68 Score=570.26 Aligned_cols=394 Identities=19% Similarity=0.244 Sum_probs=333.3
Q ss_pred HHHHHHHHHHh-CCCCCCCCeeEEEEcCcccceEEEeCCCCccc---------ccccccccCCcHHHHHccccCChHHHH
Q 036892 4 CMAKALDKATA-DGHNVDTGLKAIGLTNQRETTVLWSKSTGCPL---------YNAIVWMDARNSSEIGEGIIWGKTHFL 73 (447)
Q Consensus 4 ~i~~~~~~~~~-~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl---------~~~i~W~D~R~~~~~~~~~~~~~~~~~ 73 (447)
++.++++++.+ .++.+++ |.+||||+| +++|+||+ +|+|| +|+|+|+|+|+.++++++... .+.++
T Consensus 56 ~~~~~i~~~~~~~~~~~~~-I~~Igis~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~-~~~~~ 131 (554)
T 3l0q_A 56 AVCNAVRDAVNQADINPIQ-VKGLGFDAT-CSLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAITQAERINAT-KHPVL 131 (554)
T ss_dssp HHHHHHHHHHHHHTCCGGG-EEEEEEEEC-SCEEEEET-TSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHH-TCGGG
T ss_pred HHHHHHHHHHHHcCCCHhH-EEEEEEcCC-CceEEECC-CCCEeeccCCCCCCCCcEEecccchHHHHHHHHHh-HHHHH
Confidence 34445554432 3566778 999999999 89999999 89999 899999999999999876422 24678
Q ss_pred HHhCCCCCcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhcccc--ccCCCCCCC
Q 036892 74 EAVGLPISTCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTML--MNLKTLDWD 151 (447)
Q Consensus 74 ~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl--~d~~~~~W~ 151 (447)
++||+++++.++++||+|+++|+|++|+++++ |++++|||.|+||| +. ++|++|.+++ ||+++++|+
T Consensus 132 ~~tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~~~----~~~~~dyl~~~LTG-----~~--~~s~as~t~~~~~d~~~~~W~ 200 (554)
T 3l0q_A 132 EFVGGVISPEMQTPKLLWLKQHMPNTWSNVGH----LFDLPDFLTWRATK-----DE--TRSLCSTVCKWTYLGHEDRWD 200 (554)
T ss_dssp GGBTTCCCTTSHHHHHHHHHHHCHHHHHHEEE----EEEHHHHHHHHHHS-----CC--CEEHHHHHHHSCCBTTTTBCC
T ss_pred HHhCCCCChhhHHHHHHHHHHhChHHHHHhce----EEcHHHHHHHHHhC-----Cc--cccccchhhccccccccCCCC
Confidence 99999999999999999999999999999985 99999999999999 54 3567776654 788999999
Q ss_pred hHHHhhcCCCCC------CCC-CcccCCceee-eec------cCCCCCCCcEEeccchhHHhhhcC-CC--CCC------
Q 036892 152 KPTLETLGIPAE------ILP-KTFSNSEIIG-KLG------KGWPITGIPISGCLGDHHAAMLGQ-AC--KKG------ 208 (447)
Q Consensus 152 ~~~l~~lgi~~~------~lP-~i~~~g~~iG-~l~------~g~l~~g~pV~~g~gD~~aa~lg~-g~--~~g------ 208 (447)
+++|+.+||++. +|| +++++++++| +|+ +| |++|+||++|++|++|+++|+ |+ ++|
T Consensus 201 ~~ll~~~gi~~~~~~~~~~Lp~~i~~~~~~~G~~lt~~~A~~~G-L~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~ 279 (554)
T 3l0q_A 201 PSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASEMG-LIPGTAVSVSIIDAHAGTIGILGASGVTGENANFD 279 (554)
T ss_dssp HHHHHHHTCGGGGHHHHTTTCSCEECTTCBCTTSSCHHHHHHHT-CCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTT
T ss_pred HHHHHHcCCccccchhHHhCCCcccCCcCeeCcccCHHHHHHhC-CCCCCeEEEeChHHHhHHhhccccccCCCcccccc
Confidence 999999999963 899 6999999999 884 68 889999999999999999986 65 688
Q ss_pred -cEEEEecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCC------------CC
Q 036892 209 -EVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGV------------IS 275 (447)
Q Consensus 209 -~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~------------~~ 275 (447)
++.+++|||+++.+++ ++|..++ +.+..+ |. +..|+.|.++|+++++|.+++|+++.++. .+
T Consensus 280 ~~~~~~~GTs~~~~~~~-~~~~~~~-~~~~~~-~~--~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~ 354 (554)
T 3l0q_A 280 RRIALIGGTSTAHMAMS-RSAHFIS-GIWGPY-YS--AILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGET 354 (554)
T ss_dssp TEEEEECSSSEEEEEEE-SSCCCCT-TSEEEE-ET--SSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCC
T ss_pred ceEEEEecchheeeeec-CCccccC-Ccceee-cc--cccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCC
Confidence 7889999999887666 5565543 443322 21 13578999999999999999999998742 23
Q ss_pred CHHHHHHHHHhcCC---------CC------------------------------CHHHH---HHHHHHHHHHHHHHHHH
Q 036892 276 SASEIEELALQVHK---------QG------------------------------SQLHI---ARAVLESMCFQVKDVLD 313 (447)
Q Consensus 276 ~~~~l~~~a~~~~~---------~g------------------------------~~~~l---~rAvlEgia~~~~~~l~ 313 (447)
.|+.|++.++++++ +| +++|| +||++|||+|++|++++
T Consensus 355 ~~~~l~~~~~~~~~~~~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e 434 (554)
T 3l0q_A 355 IYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIE 434 (554)
T ss_dssp HHHHHHHHHHHHHSSGGGGGGGGTTCCEECCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccccccCceEEcccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777776655322 11 79999 89999999999999999
Q ss_pred HHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCCCCccHHHHHHHHHH
Q 036892 314 SLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPADIETTALGAAFAAGL 393 (447)
Q Consensus 314 ~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~~e~~alGaAllA~~ 393 (447)
.|++ .|.+ +++|+++||+++|++|+ | |+||++|+||.+++..|++|+|||++|++
T Consensus 435 ~l~~-~g~~------~~~i~~~GG~aks~~~~-Q-----------------i~ADv~g~pV~~~~~~e~~alGAA~lA~~ 489 (554)
T 3l0q_A 435 TMNQ-NGYN------IDTMMASGGGTKNPIFV-Q-----------------EHANATGCAMLLPEESEAMLLGSAMMGTV 489 (554)
T ss_dssp HHHT-TTCC------CCEEEEESGGGGCHHHH-H-----------------HHHHHHCCEEEEESCSCHHHHHHHHHHHH
T ss_pred HHHH-cCCC------CCEEEEeCccccCHHHH-H-----------------HHHHhhCCeEEecCCCcchHHHHHHHHHH
Confidence 9987 5887 89999999999999999 9 99999999999999999999999999999
Q ss_pred hcCCCCCHHHHhcccccCCCcEEeC-CCCHHHHH-HHHHHHHHHHHHHhhhhc
Q 036892 394 AIGVFKEEEIFASGERTKTSTTFKP-VLNEEFRK-KKAESWCRAVERIFNLAD 444 (447)
Q Consensus 394 ~~g~~~~~~~a~~~~~~~~~~~~~P-~~~~~~~~-~~y~~~~~~~~~~~~~~~ 444 (447)
++|.|++++++++++++ ..++|+| ++++++.| ++|++|+++|+.+++|..
T Consensus 490 a~G~~~~~~~a~~~~~~-~~~~~~P~~~~~~~~Y~~~y~~y~~l~~~~~~~~~ 541 (554)
T 3l0q_A 490 AAGVFESLPEAMAAMSR-IGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQA 541 (554)
T ss_dssp HTTSSSSHHHHHHHHCC-EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCcCCHHHHHHHhcC-CCcEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998777776 5789999 99998888 589999999999988753
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=2.7e-67 Score=558.12 Aligned_cols=372 Identities=21% Similarity=0.267 Sum_probs=323.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CCh------------
Q 036892 3 VCMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGK------------ 69 (447)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~------------ 69 (447)
+++.++++++ +. .++ |++||||+|++++|+||+ +|+|++|+|+|+|.|+.++++++.. .+.
T Consensus 50 ~~i~~~l~~~---~~-~~~-I~~Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~ 123 (515)
T 3i8b_A 50 SAFQEAAEQA---GG-LDD-VSALAVGGQQHGMVILDN-QGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPI 123 (515)
T ss_dssp HHHHHHHHHT---TC-STT-EEEEEEEECSSCBEEECT-TSCBCSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHH
T ss_pred HHHHHHHHhc---CC-ccC-ceEEEEeCCcceEEEECC-CCCCcCCcceecCCCHHHHHHHHHHhcCccccccccccccc
Confidence 3455666553 33 567 999999999999999999 9999999999999999999886542 222
Q ss_pred ----HHHHHHhCCCCCcccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCC--------CCCceEeecchh
Q 036892 70 ----THFLEAVGLPISTCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGV--------NGGLHVTDVSNA 137 (447)
Q Consensus 70 ----~~~~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~--------~~~~~~~d~s~A 137 (447)
+.++++||+++++.++++||+|+++|+|++|+++++ |++++|||.|+|||.. +..++++|+|+|
T Consensus 124 ~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~----~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~A 199 (515)
T 3i8b_A 124 ARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENVKKIAA----ICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDA 199 (515)
T ss_dssp HHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCSE----EECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHH
T ss_pred chhHHHHHHHHCCCCCchhHHHHHHHHHHcChHHHHHHhe----ecCHHHHHHHHhcCCCcccccccccccceeecHHHh
Confidence 788999999999999999999999999999999986 9999999999999920 000169999999
Q ss_pred hccccccCCCCCCChHHHhhc-CCC-----------CCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHh
Q 036892 138 SRTMLMNLKTLDWDKPTLETL-GIP-----------AEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAA 199 (447)
Q Consensus 138 s~tgl~d~~~~~W~~~~l~~l-gi~-----------~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa 199 (447)
|+|+|||+++++|++++|+.+ ||+ +++||+++++++++|+++ +| +++|+||++|++|++|+
T Consensus 200 s~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~G-l~~g~pV~~g~~D~~aa 278 (515)
T 3i8b_A 200 SGTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKN-VEGGCLLAPGGGDNAMA 278 (515)
T ss_dssp TTSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTT-STTCCEECCCEEHHHHH
T ss_pred hcccCeeCCcCccCHHHHHhhcCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhC-CCCCCeEEEECchHHHH
Confidence 999999999999999999998 998 789999999999999995 56 78999999999999999
Q ss_pred hhcCCCCCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCCCCHHH
Q 036892 200 MLGQACKKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVISSASE 279 (447)
Q Consensus 200 ~lg~g~~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~ 279 (447)
++|+|.++|++++++|||+++.+++ ++|..++.+.+.++++ .++.|..++++.++|.+++|+++.++. +|++
T Consensus 279 ~lG~g~~~g~~~~s~GTs~~~~~~~-~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~gg~~l~w~~~~~~~--~~~~ 350 (515)
T 3i8b_A 279 SLGLGMAVGDVSISLGTSGVAAAIS-ENPTYDLTGAVSGFAD-----CTGHYLPLACTINGSRILDAGRAALGV--DYDE 350 (515)
T ss_dssp HHHTTCCTTEEEEEESSSEEEEECB-SSCCCCTTSCSEEEEC-----SSSSEEEEEEESCSTHHHHHHHHHHTC--CHHH
T ss_pred HhhCCCCCCcEEEEechhhhhhccc-CccccCCCCcEEeeec-----CCCCEEEeeecccHHHHHHHHHHHhCC--CHHH
Confidence 9999988999999999999987666 5676666666665554 267899999999999999999999875 6999
Q ss_pred HHHHHHhcCCCC--------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccC
Q 036892 280 IEELALQVHKQG--------------------------------SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKD 327 (447)
Q Consensus 280 l~~~a~~~~~~g--------------------------------~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~ 327 (447)
|++++.++|++. +++||+||++|||+|++|++++.|++ .|.+
T Consensus 351 l~~~a~~~~~g~~gl~~lP~~~Ger~P~~~~arg~~~Gl~~~~~~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~----- 424 (515)
T 3i8b_A 351 LAKLAFASKPGANGITLVPYFDGERTPNRPNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELIRS-LGAS----- 424 (515)
T ss_dssp HHHHHHHSCTTGGGCEEECCTTCBTTTTBTTCCCEEESCCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCC-----
T ss_pred HHHHHHhCCCCCCCeEEecCCCCCcCCCCcCcceEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC-----
Confidence 999999876531 68999999999999999999999987 6887
Q ss_pred CccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcc
Q 036892 328 AKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASG 407 (447)
Q Consensus 328 ~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~ 407 (447)
+++|+++||+++|++|+ | |+||++|+||.++...|++|+|||++|++++|.++++++
T Consensus 425 -~~~i~~~GGgaks~~~~-Q-----------------i~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~---- 481 (515)
T 3i8b_A 425 -ITRILLIGGGAKSEAIR-T-----------------LAPSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPPA---- 481 (515)
T ss_dssp -CCEEEEESGGGGCHHHH-H-----------------HHHHHHTSCEEEECCCCHHHHHHHHHHHHHHHCCSSCCC----
T ss_pred -CCEEEEECchhcCHHHH-H-----------------HHHHHhCCceEecCCcccHHHHHHHHHHHHcCCCCChhH----
Confidence 89999999999999999 9 999999999999999999999999999999999887653
Q ss_pred cccCCCcEEeCCCCH
Q 036892 408 ERTKTSTTFKPVLNE 422 (447)
Q Consensus 408 ~~~~~~~~~~P~~~~ 422 (447)
+......+|+|+++.
T Consensus 482 ~~~~~~~~~~~~~~~ 496 (515)
T 3i8b_A 482 WQLTIDGVETGEPTE 496 (515)
T ss_dssp CCCCEEEEECCCCCH
T ss_pred hhhhccccCCCCccH
Confidence 432235688999873
No 18
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=1.3e-64 Score=534.39 Aligned_cols=385 Identities=19% Similarity=0.225 Sum_probs=310.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHcccc-CChHHHHHHhCCCCC
Q 036892 3 VCMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGII-WGKTHFLEAVGLPIS 81 (447)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~-~~~~~~~~~tG~~~~ 81 (447)
++++++++++.. ...+ |++||||+||||+++||+ +|+|++|+|+|+|.|+.++++++.. .+.+.++++||++++
T Consensus 58 ~~i~~~~~~~~~---~~~~-i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~ 132 (489)
T 2uyt_A 58 SAIRLGLNKVCA---AGIA-IDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFL 132 (489)
T ss_dssp HHHHHHHHHHHH---TTCC-CCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHh---CCCC-ceEEEEecCcccEEEECC-CCCCccCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCC
Confidence 567777777654 2356 999999999999999999 8999999999999999999986542 345788999999999
Q ss_pred cccHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecchhhccccccCCCCCCChHHHhhcCCC
Q 036892 82 TCFTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP 161 (447)
Q Consensus 82 ~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~lgi~ 161 (447)
+.++++||+|+++|+|++|+++++ +++++|||.|+||| ++++|+|+||+|++||+++++|++++|+.+||+
T Consensus 133 ~~~~~~kl~Wl~~~~P~~~~~~~~----~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~ 203 (489)
T 2uyt_A 133 PFNTLYQLRALTEQQPELIPHIAH----ALLMPDYFSYRLTG-----KMNWEYTNATTTQLVNINSDDWDESLLAWSGAN 203 (489)
T ss_dssp TTSHHHHHHHHHHHCGGGGGGCCE----EEEHHHHHHHHHHS-----CCCCBHHHHGGGTCEETTTTEECHHHHHHHTCC
T ss_pred CccHHHHHHHHHhcCchHHHHhhh----ccCcHHHHHHHHhC-----CccceehhhhhhcccccCcCccCHHHHHHcCCC
Confidence 999999999999999999999986 88999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCcccCCceeeeeccCCCCCCCcEEe-ccchhHHhhhcCCC-CCCcEEEEecccceeccccCccccccCCCceeee
Q 036892 162 AEILPKTFSNSEIIGKLGKGWPITGIPISG-CLGDHHAAMLGQAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTL 239 (447)
Q Consensus 162 ~~~lP~i~~~g~~iG~l~~g~l~~g~pV~~-g~gD~~aa~lg~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~ 239 (447)
+++||+++++++++|++... ..+|+||++ |++|++|+++|+|+ ++|++.+++|||+++.+.+ ++|..++..+...+
T Consensus 204 ~~~lP~i~~~~~~~G~~~~~-~~~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~-~~~~~~~~~~~~~~ 281 (489)
T 2uyt_A 204 KAWFGRPTHPGNVIGHWICP-QGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFES-QTPFTNDTALAANI 281 (489)
T ss_dssp GGGSCCCBCTTCEEEEEECT-TCCEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEE-SSCCCSHHHHHHTC
T ss_pred HHHCCCccCCCcceeeeecc-cCCCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhccccc-CCCccCHHHHhhcc
Confidence 99999999999999998532 237899998 88999999999999 9999999999999887655 44433321111100
Q ss_pred ccccCCCCCCceeecccccchHHHHHHHHHHcCC---CCCHHHHHHHHHhcC---------------CC-----------
Q 036892 240 AFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGV---ISSASEIEELALQVH---------------KQ----------- 290 (447)
Q Consensus 240 ~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~---~~~~~~l~~~a~~~~---------------~~----------- 290 (447)
.+. + ..++.|.+++.+. | .|+++.+.. ...|+++.+.+...| ++
T Consensus 282 ~~~-~-~~~~~~~~~~~~~--g---~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~l~~p~~~~~~~p~~~~~~~~g~~~ 354 (489)
T 2uyt_A 282 TNE-G-GAEGRYRVLKNIM--G---LWLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPDEMCSEIQAACR 354 (489)
T ss_dssp EEE-C-CGGGCEEEEEEEC--T---THHHHHHHHHTTCCCHHHHHHHHTTSCSSSSCCCTTSGGGSSCSCHHHHHHHHHH
T ss_pred eee-c-CCCCeEEEehhHh--H---HHHHHHhhcccchhhHHHHHHHhccCCCcCeeECCCCCccCChhhhHHHHHHHHH
Confidence 111 1 2477888887764 2 588876521 235777666543211 11
Q ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccch
Q 036892 291 -------GSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFE 363 (447)
Q Consensus 291 -------g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~ 363 (447)
.+++||+||++|||+|++|++++.|++..|.+ +++|+++||+++|++|+ |
T Consensus 355 g~~~~~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~------~~~i~~~GGgaks~~~~-Q---------------- 411 (489)
T 2uyt_A 355 EMAQPIPESDAELARCIFDSLALLYADVLHELAQLRGED------FSQLHIVGGGCQNTLLN-Q---------------- 411 (489)
T ss_dssp HTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC------CSEEEEESGGGGCHHHH-H----------------
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------CCEEEEeCChhhhHHHH-H----------------
Confidence 17999999999999999999999998766777 89999999999999999 9
Q ss_pred hhhhhccCCceeecCCCCccHHHHHHHHHHhcCCC---CCHHHHhcccccCCCcEEeCCCCHH-HHH-HHHHHHHHHHH
Q 036892 364 CRSADLLGSPVIRPADIETTALGAAFAAGLAIGVF---KEEEIFASGERTKTSTTFKPVLNEE-FRK-KKAESWCRAVE 437 (447)
Q Consensus 364 ~~~Advl~~pV~~~~~~e~~alGaAllA~~~~g~~---~~~~~a~~~~~~~~~~~~~P~~~~~-~~~-~~y~~~~~~~~ 437 (447)
|+||++|+||.++. .|++++|||++|+.+.+.. +++++++..+.+ .++|+|+++++ +.| ++|++|+++.+
T Consensus 412 -i~ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 412 -LCADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTAN--LTTFTPNPDSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp -HHHHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHSC--CEEECCCTTSHHHHHHHHTTC------
T ss_pred -HHHHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhCC--CeEECCCcchHHHHHHHHHHHhhchhh
Confidence 99999999999877 7999999988887776554 445556555543 47899999988 777 46777777654
No 19
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.2e-58 Score=483.62 Aligned_cols=363 Identities=13% Similarity=0.124 Sum_probs=285.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCeeEEEEcCcccceEEEeCCCCcccccccccccCCcHHHHHccccCChHHHHHHhCCCCCc
Q 036892 3 VCMAKALDKATADGHNVDTGLKAIGLTNQRETTVLWSKSTGCPLYNAIVWMDARNSSEIGEGIIWGKTHFLEAVGLPIST 82 (447)
Q Consensus 3 ~~i~~~~~~~~~~~~~~~~~I~aI~vs~q~~~~v~vD~~~g~pl~~~i~W~D~R~~~~~~~~~~~~~~~~~~~tG~~~~~ 82 (447)
+++.++++++. ..+ |++||||+|++++|+|| +|+||+|+|+|+|+|+.+++++...... .+++||+++++
T Consensus 55 ~~~~~~i~~~~-----~~~-I~aIgis~~~~~~v~~D--~G~pl~~ai~w~D~R~~~~~~~l~~~~~--~~~~tG~~~~~ 124 (482)
T 3h6e_A 55 RWLLDVLSRYA-----DHP-VTTIVPVGHGAGIAALT--DGRLAFPPLDYEQSIPEAVMADYRSQRD--PFARTGSPALP 124 (482)
T ss_dssp HHHHHHHHHTT-----TSC-CCEEEEEECSSCEEEEE--TTEECSCCBCTTSCCCHHHHHHHHTTCC--CHHHHCCCCCS
T ss_pred HHHHHHHHHHH-----hcC-CCEEEEecCcCCEEEEC--CCCEeccccccCCcccHHHHHHHHhhCh--HHHHhCCCCCC
Confidence 34556666643 256 99999999999999999 6999999999999999999986542222 27999999999
Q ss_pred c--cHHHHHHHHHhcChHHHHHHhcCCccccChhHHHHHhHcCCCCCCceEeecch-hhccccccCCCCCCChHHHhhcC
Q 036892 83 C--FTAVKLLWMMENVDVVKEAIKKGDALFGTIDTWLIWNLTGGVNGGLHVTDVSN-ASRTMLMNLKTLDWDKPTLETLG 159 (447)
Q Consensus 83 ~--~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~~~dyl~~~LTG~~~~~~~~~d~s~-As~tgl~d~~~~~W~~~~l~~lg 159 (447)
. ++++||+|+++|+||+|++++ |++++|||.|+||| ++++|+|+ ||+|+|||+++++|+ ++|+.+|
T Consensus 125 ~~~~~~~kl~Wl~~~~Pe~~~~~~-----~l~~~dyl~~~LTG-----~~~td~s~~As~t~l~d~~~~~W~-~ll~~~g 193 (482)
T 3h6e_A 125 DGLNIGSQLWWLDQLHPDVMANAT-----LLPWAQYWAWFLTG-----RAVSEVTSLGCHSDLWDPQDGDFS-PMAKRLG 193 (482)
T ss_dssp TTSSHHHHHHHHHHHSHHHHHSCE-----EEEHHHHHHHHTTS-----CCCEEHHHHTTTCSSEETTTTEEC-HHHHHTT
T ss_pred CchhHHHHHHHHHHcCchhhhcCE-----EEccHHHHHHHHhC-----CeeeecchhhhccCCccCCcCcHH-HHHHHcC
Confidence 8 899999999999999999874 88999999999999 89999998 899999999999999 5999999
Q ss_pred CCCCCCCCcccCCceeeeec------cCCCCCCCcEEeccchhHHhhhc---CCC-CCCc-EEEEecccceeccccCc--
Q 036892 160 IPAEILPKTFSNSEIIGKLG------KGWPITGIPISGCLGDHHAAMLG---QAC-KKGE-VKSTYGTGAFILLNTGE-- 226 (447)
Q Consensus 160 i~~~~lP~i~~~g~~iG~l~------~g~l~~g~pV~~g~gD~~aa~lg---~g~-~~g~-~~~s~GTs~~i~~~~~~-- 226 (447)
|+ ++||+++++++++|+++ +| +++|+||++|++|++|+++| +|+ ++|+ +++++|||.++. ++++
T Consensus 194 i~-~~LP~v~~~~~~~G~l~~~~A~~~G-L~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~-~~~~~~ 270 (482)
T 3h6e_A 194 WA-ARFAPIVRAGDTVGALLPAIAERTG-LSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAM-RLPATP 270 (482)
T ss_dssp CG-GGBCCEECTTSEEEECCHHHHHHHT-CCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEE-EECSSC
T ss_pred CH-HhCCCCcCCCceeeeeCHHHHHHhC-CCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEE-EecCcc
Confidence 99 99999999999999994 58 88999999999999999999 999 9997 589999998764 3434
Q ss_pred -c-ccccCC-CceeeeccccCCCCCCceeecccccchHHHHHHHHHHcCCC----CCHHHHHHHHHhc--------CC-C
Q 036892 227 -E-VVKSKH-ELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGVI----SSASEIEELALQV--------HK-Q 290 (447)
Q Consensus 227 -~-~~~~~~-~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~----~~~~~l~~~a~~~--------~~-~ 290 (447)
+ |..++. +++ ++. . ...|.++|...++|.+++|+++..+.. .++.+++..+... |. .
T Consensus 271 ~~~~~~~~~~~~~---~~~---~-~~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~a~~~~~g~~Gl~flP~l~ 343 (482)
T 3h6e_A 271 VDTATLPEARDCL---VNV---D-VHGRPVPSARFMGGREIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLM 343 (482)
T ss_dssp CCGGGCCGGGTEE---EEE---C-TTSCEEEEEEECHHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHHHHTTCEEESCSS
T ss_pred CCccccchhhcee---ecc---c-cccccccchhhhhHHHHHHHHHhcccccccccchhhHHHhccccCCCCeEEecCCC
Confidence 3 323332 322 221 1 124567777778999999997644321 2333332222111 10 0
Q ss_pred C---------------CHHHHHHHHHHH--HHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcc
Q 036892 291 G---------------SQLHIARAVLES--MCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYY 353 (447)
Q Consensus 291 g---------------~~~~l~rAvlEg--ia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~ 353 (447)
| +..|++||++|+ |+|++|++++.|++ .++|+++||+++|++|+ |
T Consensus 344 Ger~P~~d~rG~~~Gl~~~~l~RA~lE~~Gia~~~r~~l~~~~~-----------~~~i~~~GG~a~s~~w~-Q------ 405 (482)
T 3h6e_A 344 RGFGPYPHGRFAWINRPEDWFERRAAACLYAALVADTALDLIGS-----------TGRILVEGRFAEADVFV-R------ 405 (482)
T ss_dssp TTCSSCTTCCCEEESCCSSHHHHHHHHHHHHHHHHHHHHHHTTC-----------CSEEEEESGGGGCHHHH-H------
T ss_pred CCCCCCCCCceEEeCCCHHHHHHHHHHHHhHHHHHHHHHHHhcC-----------CCeEEEeCCcccCHHHH-H------
Confidence 1 348999999995 99999999999863 36899999999999999 9
Q ss_pred cCccccccchhhhhhc-cCCceeecCCCCccHHHHHHHHHHhcCCCCCHHHHhcccccCCCcEEeCCCC---HHHHHHHH
Q 036892 354 FPFLSFSYFECRSADL-LGSPVIRPADIETTALGAAFAAGLAIGVFKEEEIFASGERTKTSTTFKPVLN---EEFRKKKA 429 (447)
Q Consensus 354 ~~~~~~~~~~~~~Adv-l~~pV~~~~~~e~~alGaAllA~~~~g~~~~~~~a~~~~~~~~~~~~~P~~~---~~~~~~~y 429 (447)
|+||+ +|+||++++..|++|+|||++|+++.-. . ....+.|... .....+++
T Consensus 406 -----------i~ADv~~g~pV~~~~~~e~~alGAA~lA~~a~~~------------~-~~~~~~~~~~~~~~~~~~~~~ 461 (482)
T 3h6e_A 406 -----------ALASLRPDCAVYTANAHNDVSFGALRLIDPGLRP------------Q-GELVRIEPLDTGSWADLDTYR 461 (482)
T ss_dssp -----------HHHHHSTTSEEEEESSCCCTTGGGHHHHCTTCCC------------S-SCEEECCCCCC----CHHHHH
T ss_pred -----------HHhhhcCCCeEEEcCCCchHHHHHHHHhCccccc------------c-cccCcccccccccchHHHHHH
Confidence 99999 9999999999999999999999887211 0 1344555554 12333457
Q ss_pred HHHHHHHHH
Q 036892 430 ESWCRAVER 438 (447)
Q Consensus 430 ~~~~~~~~~ 438 (447)
++|+++++.
T Consensus 462 ~~w~~~~~~ 470 (482)
T 3h6e_A 462 NRWQAEVEA 470 (482)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhhc
Confidence 789888765
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.17 E-value=7.1e-11 Score=114.85 Aligned_cols=105 Identities=19% Similarity=0.196 Sum_probs=86.1
Q ss_pred chHHHHHHHHHHcCCCCCHHHHHHHHHhcCC----C------------------CCHHHHHHHHHHHHHHHHHHHHHHHH
Q 036892 259 IAGAAVQWLRDSLGVISSASEIEELALQVHK----Q------------------GSQLHIARAVLESMCFQVKDVLDSLQ 316 (447)
Q Consensus 259 ~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~----~------------------g~~~~l~rAvlEgia~~~~~~l~~l~ 316 (447)
.+|..++|+.+.++. +++++++++.+.+. + .+++||+|+++|+|++.+.+. ++
T Consensus 130 GtG~~le~~a~~lg~--~~~el~~la~~~~~p~~~~~~c~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i~~~---~~ 204 (270)
T 1hux_A 130 GTGRFLDVMANILEV--KVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIGL---AN 204 (270)
T ss_dssp TSHHHHHHHHHHHTC--CTTTHHHHHTTCCSCCCCCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HH
T ss_pred hhHHHHHHHHHHhCC--CHHHHHHHHhhCCCCCCcccccchhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---Hh
Confidence 357899999999986 57888888866431 1 178999999999999997443 43
Q ss_pred hhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCCCC-ccHHHHHHHHHHh
Q 036892 317 KDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPADIE-TTALGAAFAAGLA 394 (447)
Q Consensus 317 ~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~~e-~~alGaAllA~~~ 394 (447)
. .+. .+.|+++||.++|+.|+ | +++|++|+||.+++..+ .+|+|||++|+..
T Consensus 205 ~-~~~-------~~~i~~~GG~a~n~~~~-~-----------------~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 205 R-VGI-------VKDVVMTGGVAQNYGVR-G-----------------ALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp T-TCC-------CSSEEEESGGGGCHHHH-H-----------------HHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred c-CCC-------CCeEEEeCccccCHHHH-H-----------------HHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 3 232 26799999999999999 9 99999999999998888 5999999999764
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.90 E-value=3.7e-05 Score=74.05 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=78.2
Q ss_pred chHHHHHHHHHHcCCCCCHHHHHHHHHhcCC----C------------------CCHHHHHHHHHHHHHHHHHHHHHHHH
Q 036892 259 IAGAAVQWLRDSLGVISSASEIEELALQVHK----Q------------------GSQLHIARAVLESMCFQVKDVLDSLQ 316 (447)
Q Consensus 259 ~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~----~------------------g~~~~l~rAvlEgia~~~~~~l~~l~ 316 (447)
.+|..++-+.+.++. +|++..+++..... + .+++++.++++++++-.+.... .
T Consensus 128 g~G~f~d~~a~~l~~--~~~~~~~~~~~a~~~~~i~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~---~ 202 (276)
T 4ehu_A 128 GTGRFLDVMAKIIEV--DVSELGSISMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLV---K 202 (276)
T ss_dssp TSHHHHHHHHHHHTC--CGGGHHHHHTTCSSCCCCCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---H
T ss_pred chhhHHHHHHHHhcc--ChhhhHHHHhcCCCCCCcCCccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHH---H
Confidence 467788888887876 45555555443221 1 1789999999999877655433 2
Q ss_pred hhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHHHh
Q 036892 317 KDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAGLA 394 (447)
Q Consensus 317 ~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~~~ 394 (447)
+. . . ++.|+++||.++|+.+. + .+++.+|+++.+++. .+.+|+|||++|..-
T Consensus 203 ~~-~-~------~~~vvl~GGva~n~~lr-~-----------------~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 203 RI-G-V------QRNVVMVGGVARNSGIV-R-----------------AMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HH-C-C------CSSEEEESGGGGCHHHH-H-----------------HHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred hc-c-c------CCeEEEecCccchHHHH-H-----------------HHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 21 2 2 57899999999999999 9 999999999999885 557899999999654
No 22
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.65 E-value=0.00011 Score=70.29 Aligned_cols=153 Identities=19% Similarity=0.227 Sum_probs=94.4
Q ss_pred CCCcEEeccchhHHhhhcCCCCCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHH
Q 036892 185 TGIPISGCLGDHHAAMLGQACKKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAV 264 (447)
Q Consensus 185 ~g~pV~~g~gD~~aa~lg~g~~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~ 264 (447)
.|+++..-.++..|++++.+...+-+.+.-|.+.-+..+. . + ........+.||..+
T Consensus 118 ~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~~~~-~-------g---------------~~~~~~~~~~Gg~~~ 174 (272)
T 3h1q_A 118 AGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIAVIE-K-------G---------------KITATFDEPTGGTHL 174 (272)
T ss_dssp TTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEEEEE-T-------T---------------EEEEECCBSCCHHHH
T ss_pred cCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEEEEE-C-------C---------------EEEEEecCCCcHHHH
Confidence 4677777778888888887774343444433333222211 0 1 111112333456555
Q ss_pred HH-HHHHcCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHH
Q 036892 265 QW-LRDSLGVISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLA 343 (447)
Q Consensus 265 ~W-~~~~~~~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~ 343 (447)
.+ +.+.+.. ++++.++.-.+........++++.+++.+...+++.++. .+ . ++.|+++||+++++.
T Consensus 175 ~~~l~~~l~~--~~~~ae~~k~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~----~~-~------~~~ivL~GG~a~~~~ 241 (272)
T 3h1q_A 175 SLVLAGSYKI--PFEEAETIKKDFSRHREIMRVVRPVIEKMALIVKEVIKN----YD-Q------TLPVYVVGGTAYLTG 241 (272)
T ss_dssp HHHHHHHHTC--CHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHHHHHHTTT----SC-S------SCCEEEESGGGGSTT
T ss_pred HHHHHHHhCC--CHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHh----cC-C------CCEEEEECCccchhh
Confidence 44 4455553 455555554433222245677777787777665554432 23 2 578999999999999
Q ss_pred HHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHH
Q 036892 344 LLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAA 391 (447)
Q Consensus 344 ~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA 391 (447)
+. + ++.+.++.||.++.+ .+++|+|||+.|
T Consensus 242 l~-~-----------------~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 242 FS-E-----------------EFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HH-H-----------------HHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HH-H-----------------HHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 99 9 999999999998765 458999999753
No 23
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.59 E-value=0.00047 Score=67.21 Aligned_cols=110 Identities=14% Similarity=0.053 Sum_probs=82.2
Q ss_pred ccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCC--------------------C---------------C-CHHHHHH
Q 036892 255 GSVAIAGAAVQWLRDSLGVISSASEIEELALQVHK--------------------Q---------------G-SQLHIAR 298 (447)
Q Consensus 255 g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~--------------------~---------------g-~~~~l~r 298 (447)
|+...+|..++-++..++. .++++|.++|.+-.. . + +++|+.+
T Consensus 136 g~aaGgGtFl~l~a~ll~~-~~~~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk~~~l~~~g~~~eDIaa 214 (287)
T 2ews_A 136 GIGTGGGMIQGLGYLLSQI-TDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLA 214 (287)
T ss_dssp EESCSHHHHHHHHHHHHCC-CCHHHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTTGGGCTTSCCCHHHHHH
T ss_pred ccccchhhHHHHHHHHhCC-CCHHHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHHHHHHHhCCCCHHHHHH
Confidence 4444568888888877774 379999999854310 0 1 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecc-ccccHHHHHhhhhhcccCccccccchhhhhhc---cCCce
Q 036892 299 AVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGA-IDANLALLLSFEKYYYFPFLSFSYFECRSADL---LGSPV 374 (447)
Q Consensus 299 AvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG-~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Adv---l~~pV 374 (447)
+++.+|+..+........+ ..+ +++|+++|| .+.|+..+ + .+.+. ++.++
T Consensus 215 sl~~sV~~~I~~la~~~a~--~~~------i~~Vvf~Gg~l~~n~~l~-~-----------------~l~~~~~~~~~~~ 268 (287)
T 2ews_A 215 AVIGVVGEVVTTMAITVAR--EFK------TENIVYIGSSFHNNALLR-K-----------------VVEDYTVLRGCKP 268 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HTT------CCEEEEESGGGTTCHHHH-H-----------------HHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHH--hCC------CCeEEEeCCchhcCHHHH-H-----------------HHHHHHhhCCceE
Confidence 9999998887665443222 233 568999999 89999999 8 77776 58999
Q ss_pred eecCCCC-ccHHHHHHHH
Q 036892 375 IRPADIE-TTALGAAFAA 391 (447)
Q Consensus 375 ~~~~~~e-~~alGaAllA 391 (447)
..++..+ .+|+|||+.|
T Consensus 269 ~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 269 YYVENGAFSGAIGALYLE 286 (287)
T ss_dssp EECTTGGGHHHHHHHHTC
T ss_pred EECCCccHHHHHHHHHhC
Confidence 9998766 5999999864
No 24
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.55 E-value=0.00041 Score=69.63 Aligned_cols=110 Identities=16% Similarity=0.101 Sum_probs=80.4
Q ss_pred ccccchHHHHHHHHHHcCCCCCHHHHHHHHHhcCC----------------------C------C-----------CHHH
Q 036892 255 GSVAIAGAAVQWLRDSLGVISSASEIEELALQVHK----------------------Q------G-----------SQLH 295 (447)
Q Consensus 255 g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~----------------------~------g-----------~~~~ 295 (447)
|+...+|..+.-.+-+++. .+|+++.++|.+-.. . | +++|
T Consensus 202 G~siGGGTflGL~~lLtg~-~~~dEl~~lA~~Gd~~~vDllV~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~~~~~~eD 280 (360)
T 2i7n_A 202 GTSLGGGTFLGLCCLLTGC-ETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKED 280 (360)
T ss_dssp EESCSHHHHHHHHHHHHCC-CSHHHHHHHHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHHTTCCHHH
T ss_pred cccCccHhHHHHHHHHhCC-CCHHHHHHHHHcCCCCcccceeeecccCcccccCCCccceeehhhhHhhHhhhcCCCHHH
Confidence 4444566666666633332 589999999864221 0 0 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecc-ccccHHHHHhhhhhcccCccccccchhhhhhccC---
Q 036892 296 IARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGA-IDANLALLLSFEKYYYFPFLSFSYFECRSADLLG--- 371 (447)
Q Consensus 296 l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG-~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~--- 371 (447)
|+++++.+|+..+.++.-...+..+ +++|+++|| .++|+..+ + .++..++
T Consensus 281 Ia~gll~sVa~~I~~lA~l~A~~~~--------i~~IvftGgfla~n~~~~-~-----------------~L~~~l~~ws 334 (360)
T 2i7n_A 281 LARATLVTITNNIGSIARMCALNEN--------IDRVVFVGNFLRINMVSM-K-----------------LLAYAMDFWS 334 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--------CCCEEEESGGGCSSSHHH-H-----------------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEEeCcccccCHHHH-H-----------------HHHHHHhhhh
Confidence 9999999999998776533323234 457999999 89999999 9 9999985
Q ss_pred ---CceeecCCCC-ccHHHHHHHH
Q 036892 372 ---SPVIRPADIE-TTALGAAFAA 391 (447)
Q Consensus 372 ---~pV~~~~~~e-~~alGaAllA 391 (447)
.++..++..+ .+|+|||+.+
T Consensus 335 ~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 335 KGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp TTSCCEEEETTTTCHHHHHHHHHH
T ss_pred cCCeeEEEcCCccHHHHHHHHHHh
Confidence 7888887655 7999999975
No 25
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.15 E-value=0.0016 Score=69.83 Aligned_cols=83 Identities=16% Similarity=0.124 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCC
Q 036892 293 QLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGS 372 (447)
Q Consensus 293 ~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~ 372 (447)
-.++++.+++.+.-.+++.++.. +.. ...++.|+++||.++.|.+. + ++.+.+|+
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a----~~~---~~~i~~VvLvGG~sriP~v~-~-----------------~l~~~fg~ 359 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDA----GLS---VSDIDDVILVGGQTRMPMVQ-K-----------------KVAEFFGK 359 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHT----TCC---GGGCSEEEEESGGGGSHHHH-H-----------------HHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----CCC---HHHCcEEEEeCCccCchHHH-H-----------------HHHHHhcc
Confidence 45667777777777766666543 322 12378999999999999999 9 99999999
Q ss_pred ceeecC-CCCccHHHHHHHHHHhcCCCCC
Q 036892 373 PVIRPA-DIETTALGAAFAAGLAIGVFKE 400 (447)
Q Consensus 373 pV~~~~-~~e~~alGaAllA~~~~g~~~~ 400 (447)
++.... ..++.|+|||+.|+.-.|..++
T Consensus 360 ~~~~~~nPdeaVA~GAai~a~~l~~~~~~ 388 (605)
T 4b9q_A 360 EPRKDVNPDEAVAIGAAVQGGVLTGDVKD 388 (605)
T ss_dssp CCCSSSCTTTHHHHHHHHHHHHHHTSSCS
T ss_pred CcCCCcChhHHHHHhHHHHHHHhcCCCCc
Confidence 988755 4678999999999977665443
No 26
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.42 E-value=0.0064 Score=60.85 Aligned_cols=76 Identities=17% Similarity=0.094 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-C
Q 036892 293 QLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL-G 371 (447)
Q Consensus 293 ~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl-~ 371 (447)
-.++++..++.+.-.+++.++.. +.. ...++.|+++||.++.|.+. + ++.+.+ +
T Consensus 315 ~~~~~~~~~~~i~~~i~~~l~~~----~~~---~~~i~~VvLvGG~s~~p~l~-~-----------------~l~~~~~~ 369 (394)
T 3qfu_A 315 FEELNLDLFKKTLKPVEKVLQDS----GLE---KKDVDDIVLVGGSTRIPKVQ-Q-----------------LLESYFDG 369 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH----TCC---GGGCCEEEEESGGGGSHHHH-H-----------------HHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----CCC---HHHCCEEEEECCccccHHHH-H-----------------HHHHHcCC
Confidence 34556666666666666665543 221 12279999999999999999 9 999999 8
Q ss_pred CceeecC-CCCccHHHHHHHHHH
Q 036892 372 SPVIRPA-DIETTALGAAFAAGL 393 (447)
Q Consensus 372 ~pV~~~~-~~e~~alGaAllA~~ 393 (447)
.+|.... ..++.|+|||+.|+.
T Consensus 370 ~~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 370 KKASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CCCBCCSCTTTHHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHh
Confidence 8887764 567899999999874
No 27
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.33 E-value=0.007 Score=61.02 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-CC
Q 036892 294 LHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL-GS 372 (447)
Q Consensus 294 ~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl-~~ 372 (447)
.++++.+++.+.-.+++.++.. +.. ...++.|+++||.++.|.+. + ++.+.+ +.
T Consensus 324 ~~~~~~~~~~i~~~i~~~l~~~----~~~---~~~i~~VvLvGG~s~~p~l~-~-----------------~l~~~~~~~ 378 (404)
T 3i33_A 324 EELNADLFRGTLEPVEKALRDA----KLD---KGQIQEIVLVGGSTRIPKIQ-K-----------------LLQDFFNGK 378 (404)
T ss_dssp HHHTHHHHHHTHHHHHHHHHHH----TCC---GGGCCEEEEESGGGGCHHHH-H-----------------HHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCC---HhhCCEEEEECCccccHHHH-H-----------------HHHHHcCCC
Confidence 4455556666665555555443 221 12278999999999999999 9 999999 88
Q ss_pred ceeecC-CCCccHHHHHHHHHHhc
Q 036892 373 PVIRPA-DIETTALGAAFAAGLAI 395 (447)
Q Consensus 373 pV~~~~-~~e~~alGaAllA~~~~ 395 (447)
+|.... ..++.|+|||+.|+.-.
T Consensus 379 ~v~~~~~p~~ava~Gaa~~a~~l~ 402 (404)
T 3i33_A 379 ELNKSINPDEAVAYGAAVQAAILI 402 (404)
T ss_dssp CCBCSSCTTTHHHHHHHHHHHHHC
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhc
Confidence 887764 46789999999998643
No 28
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=96.28 E-value=0.0078 Score=60.87 Aligned_cols=76 Identities=18% Similarity=0.082 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCc
Q 036892 294 LHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSP 373 (447)
Q Consensus 294 ~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~p 373 (447)
.++++.+++.+.-.+++.++.. +.. ...++.|+++||.++.|.+. + ++.+.++.+
T Consensus 317 ~~~~~~~~~~i~~~i~~~l~~~----~~~---~~~i~~V~LvGG~s~~p~v~-~-----------------~l~~~f~~~ 371 (409)
T 4gni_A 317 ETIARTVFEGFNRLVESAVKKA----GLD---PLDVDEVIMSGGTSNTPRIA-A-----------------NFRYIFPES 371 (409)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHT----TCC---GGGCCEEEEESGGGGCHHHH-H-----------------HHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCC---HHHCCEEEEECCccccHHHH-H-----------------HHHHHcCCc
Confidence 4455566666665555555432 322 12279999999999999999 9 999999987
Q ss_pred eee---------cCCCCccHHHHHHHHHHh
Q 036892 374 VIR---------PADIETTALGAAFAAGLA 394 (447)
Q Consensus 374 V~~---------~~~~e~~alGaAllA~~~ 394 (447)
+.+ .+..++.|+|||+.|+.-
T Consensus 372 ~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 372 TRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp SEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred cccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 533 345778999999998753
No 29
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.74 E-value=0.31 Score=46.49 Aligned_cols=184 Identities=14% Similarity=0.091 Sum_probs=86.5
Q ss_pred CCcEEeccchhHHhhhcC---CC-CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCC-Cceeecccccch
Q 036892 186 GIPISGCLGDHHAAMLGQ---AC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAP-TNYALEGSVAIA 260 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~g~~~~~ 260 (447)
++||.. ..|..++++|- +. ...-+++++||+--..++.+.+.....++.-..+.|......+ +.-.++. ..++
T Consensus 95 ~~pv~v-~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~~gcle~-~~s~ 172 (292)
T 2gup_A 95 QLPVHL-ENDANCVGLSELLAHPELENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAPAEKLNNWSQ-LAST 172 (292)
T ss_dssp CCCEEE-EEHHHHHHHHHHHHCTTCSSEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGCBSSCCSSSCCBHHH-HHSH
T ss_pred CCCEEE-echHHHHHHHHHHhcCCCCeEEEEEECCceEEEEEECCEEEecCCCCCccceeEEeccCCCCCCcHHH-hcCH
Confidence 567655 58999999883 34 4567889999984443344333332222211111222110000 1111111 1122
Q ss_pred HHHHHHHHHHcCC-CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecccc
Q 036892 261 GAAVQWLRDSLGV-ISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAID 339 (447)
Q Consensus 261 G~~~~W~~~~~~~-~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s 339 (447)
-...+++++..+. ..+.+++.+.+.+ +++ ..+.+++-.+..+...+..+... .+ ++.|++.||.+
T Consensus 173 ~~l~~~~~~~~~~~~~~~~~v~~~a~~----gd~--~a~~i~~~~~~~L~~~i~~l~~~--l~------p~~IvlgG~i~ 238 (292)
T 2gup_A 173 GNMVRYVIEKSGHTDWDGRKIYQEAAA----GNI--LCQEAIERMNRNLAQGLLNIQYL--ID------PGVISLGGSIS 238 (292)
T ss_dssp HHHHHHHHHHHSSCCCCHHHHHHHHHT----TCH--HHHHHHHHHHHHHHHHHHHHHHH--HC------CSEEEEESGGG
T ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHHc----CCH--HHHHHHHHHHHHHHHHHHHHHHH--hC------CCEEEEeCccc
Confidence 2344555544332 1145555555542 222 23333333334443334333322 23 57899999987
Q ss_pred ccHHHHHhhhhhcccCccccccchhhhhhc--cCCceeecCC-CCccHHHHHHHHHH
Q 036892 340 ANLALLLSFEKYYYFPFLSFSYFECRSADL--LGSPVIRPAD-IETTALGAAFAAGL 393 (447)
Q Consensus 340 ~s~~~~~q~~~~~~~~~~~~~~~~~~~Adv--l~~pV~~~~~-~e~~alGaAllA~~ 393 (447)
.++.+.+.+++...--+ ..... ...+|..... .++.++|||.++..
T Consensus 239 ~~~~~~~~l~~~l~~~~--------~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 239 QNPDFIQGVKKAVEDFV--------DAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp GCHHHHHHHHHHHHHHH--------HHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhh--------cccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 66665534332221000 00000 2345666553 55789999998754
No 30
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.37 E-value=0.073 Score=52.74 Aligned_cols=84 Identities=14% Similarity=0.032 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL- 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl- 370 (447)
++.++.+++.++++-.+.+.+....+..+ ++.|+++||.++|..++ + .+.+.+
T Consensus 221 ~~~diAasfq~~l~~~l~~~~~~a~~~~g--------~~~vvlsGGVa~N~~L~-~-----------------~L~~~l~ 274 (334)
T 3eno_A 221 AIEDISYSIQETAFAMLVEVLERALYVSG--------KDEILMAGGVALNRRLR-D-----------------MVTNMAR 274 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CSEEEEESSGGGCHHHH-H-----------------HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEEcCCHHHHHHHH-H-----------------HHHHHHH
Confidence 67889999999988888877776655444 46899999999999999 7 777766
Q ss_pred --CCceeecC----CCCccHHHHHHHHHHhcCCCCCH
Q 036892 371 --GSPVIRPA----DIETTALGAAFAAGLAIGVFKEE 401 (447)
Q Consensus 371 --~~pV~~~~----~~e~~alGaAllA~~~~g~~~~~ 401 (447)
|.+|.+++ .+.+.++|+|.....-.|...+.
T Consensus 275 ~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~~~~~ 311 (334)
T 3eno_A 275 EAGIRSYLTDREYCMDNGIMIAQAALLMYKSGVRMSV 311 (334)
T ss_dssp HHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTCCCCG
T ss_pred HcCCEEEecCCCCCChHHHHHHHHHHHHHHcCCCCCc
Confidence 77787764 46688999998777767766554
No 31
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.17 E-value=0.094 Score=51.70 Aligned_cols=84 Identities=13% Similarity=0.018 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL- 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl- 370 (447)
+++++.+++.++++-.+........+..+ .+.|+++||.++|..++ + .+.+.+
T Consensus 216 ~~~diAa~fq~~l~~~l~~~~~~~~~~~~--------~~~vvlsGGVa~N~~l~-~-----------------~l~~~l~ 269 (330)
T 2ivn_A 216 RVEDLAYSFQETAFAALVEVTERAVAHTE--------KDEVVLVGGVAANNRLR-E-----------------MLRIMTE 269 (330)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGCHHHH-H-----------------HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHH-H-----------------HHHHHHH
Confidence 47888888888888887777776655444 46899999999999999 7 666665
Q ss_pred --CCceeecC----CCCccHHHHHHHHHHhcCCCCCH
Q 036892 371 --GSPVIRPA----DIETTALGAAFAAGLAIGVFKEE 401 (447)
Q Consensus 371 --~~pV~~~~----~~e~~alGaAllA~~~~g~~~~~ 401 (447)
|.+|.+++ .+.+.++|+|.......|...++
T Consensus 270 ~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~~~~~~ 306 (330)
T 2ivn_A 270 DRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRL 306 (330)
T ss_dssp HHTCEEECCCHHHHSSCHHHHHHHHHHHHHTTCCCCG
T ss_pred HcCCEEEecCCCCCChhHHHHHHHHHHHHhcCCCCCc
Confidence 67777765 35678999988766655655444
No 32
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=95.17 E-value=0.036 Score=55.26 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=40.4
Q ss_pred ccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHH
Q 036892 329 KFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAG 392 (447)
Q Consensus 329 ~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~ 392 (447)
++.|+++||+++.|.+. + ++.+.++.+|....+ .++.|+|||+.|+
T Consensus 334 i~~IvL~GG~s~~p~l~-~-----------------~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 334 IDDVILVGGQTRMPMVQ-K-----------------KVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp CCEEEEESGGGGSHHHH-H-----------------HHHHHHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred CCEEEEecCccccHHHH-H-----------------HHHHHhCCCCCCCcChHHHHHHHHHHHHH
Confidence 78999999999999999 8 889999988876654 6689999999875
No 33
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=94.82 E-value=0.042 Score=57.47 Aligned_cols=77 Identities=19% Similarity=0.152 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCce
Q 036892 295 HIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPV 374 (447)
Q Consensus 295 ~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV 374 (447)
++++.+++.+.-.+++.++. ++.. ...++.|+++||.++.|.+. + ++.+.++.++
T Consensus 276 ~l~~~~~~~i~~~i~~~L~~----a~~~---~~~i~~VvLvGG~s~~p~v~-~-----------------~l~~~f~~~~ 330 (509)
T 2v7y_A 276 ELSAHLVERTMGPVRQALQD----AGLT---PADIDKVILVGGSTRIPAVQ-E-----------------AIKRELGKEP 330 (509)
T ss_dssp HHTHHHHHTTHHHHHHHHHH----HTCC---GGGCSEEEEESGGGGCHHHH-H-----------------HHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHH----cCCC---hhHCcEEEEECCcccChHHH-H-----------------HHHHHhCCCc
Confidence 34444555554444444433 3322 12378999999999999999 9 8999999887
Q ss_pred eecC-CCCccHHHHHHHHHHhcC
Q 036892 375 IRPA-DIETTALGAAFAAGLAIG 396 (447)
Q Consensus 375 ~~~~-~~e~~alGaAllA~~~~g 396 (447)
.... ..++.|+|||+.|+.-.|
T Consensus 331 ~~~~~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 331 HKGVNPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp BCCSCTTTHHHHHHHHHHHHHHT
T ss_pred CcCCCchhhhHhhHHHHHHHhcC
Confidence 6555 467899999999986544
No 34
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=94.44 E-value=0.12 Score=56.75 Aligned_cols=78 Identities=19% Similarity=0.154 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL- 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl- 370 (447)
+++++.+++.++++-.+.+......+..| ++.|.++||.++|..++ + .+.+.+
T Consensus 665 ~~~dIAasFq~ala~~L~~~~~~a~~~~g--------~~~VvLsGGVa~N~~Lr-~-----------------~L~~~l~ 718 (761)
T 3vth_A 665 EKSYISAKFHNTVVNFTYDLANLIRKETG--------INKVVLSGGSFQNRYLL-R-----------------RLIEKLS 718 (761)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGSHHHH-H-----------------HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEECcHHHHHHHH-H-----------------HHHHHHH
Confidence 56788888888888887777766555445 46899999999999999 7 666665
Q ss_pred --CCceeecC----CCCccHHHHHHHHHHhc
Q 036892 371 --GSPVIRPA----DIETTALGAAFAAGLAI 395 (447)
Q Consensus 371 --~~pV~~~~----~~e~~alGaAllA~~~~ 395 (447)
|.+|..+. .+.+.++|.|++|+...
T Consensus 719 ~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 719 LSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred hCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 78887765 45678999999987543
No 35
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.26 E-value=1.6 Score=41.77 Aligned_cols=181 Identities=14% Similarity=0.105 Sum_probs=88.0
Q ss_pred CCcEEeccchhHHhhhcC-----CC-CCCcEEEEecccceeccccCccccccCCCceeeecccc-CCC---CCCceeecc
Q 036892 186 GIPISGCLGDHHAAMLGQ-----AC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKL-GPK---APTNYALEG 255 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~-----g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~-g~~---~~~~~~~~g 255 (447)
++||.. ..|..++++|- +. ...-+++++||+--..++.+.+.....++.-..+.|.. .+. ..+...++.
T Consensus 98 ~~pV~v-~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~~~~~~~~~~~~~le~ 176 (297)
T 4htl_A 98 GLPVAI-ENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNE 176 (297)
T ss_dssp CSCEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCCTTSCCCCGGGSBSSCCCSSCGGGGBHHH
T ss_pred CcCEEE-ecHHHHHHHHHHHhCCCCCCCcEEEEEECcceEEEEEECCEEEecCCCCcccccceEecCCCCcCcccCcHHH
Confidence 567554 47888888763 33 45668899999854444443343332222211222221 000 011111211
Q ss_pred cccchHHHHHHHHHHcCCC---CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEE
Q 036892 256 SVAIAGAAVQWLRDSLGVI---SSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLL 332 (447)
Q Consensus 256 ~~~~~G~~~~W~~~~~~~~---~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i 332 (447)
..++-...+.+++..+.. .+.+++.+.+.+ ++ ...+.+++-.+..+...+..+... .+ ++.|
T Consensus 177 -~~s~~~l~~~~~~~~~~~~~~~~~~~i~~~a~~----gd--~~a~~~~~~~~~~La~~i~~l~~~--~~------p~~I 241 (297)
T 4htl_A 177 -TTTMLVLRRQYAELTGRPLEEITGEEIFANYDA----HD--AVSERLITEFYTGICTGLYNLIYL--FD------PTHI 241 (297)
T ss_dssp -HSSHHHHHHHHHHHHCCCGGGCCHHHHHHHHHT----TC--HHHHHHHHHHHHHHHHHHHHHHHH--HC------CSEE
T ss_pred -hccHHHHHHHHHHHhcCCccCCCHHHHHHHHHc----CC--HHHHHHHHHHHHHHHHHHHHHHHH--hC------CCEE
Confidence 111222344454444331 134455555542 23 233444444444444444444322 23 5789
Q ss_pred EEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHHHh
Q 036892 333 RVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAGLA 394 (447)
Q Consensus 333 ~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~~~ 394 (447)
++.||.++.+.+.+.+++...- + . .-..+|..... .+++++|||.++...
T Consensus 242 vlgGgi~~~~~~~~~l~~~l~~--~--~--------~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 242 FIGGGITSRPTFIAELKHHMES--F--G--------LRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp EEESGGGGSTTHHHHHHHHHTT--T--C--------CTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred EEeCcccccHHHHHHHHHHHHH--h--c--------cCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 9999988766555464444331 0 0 01235555553 568999999988654
No 36
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=94.23 E-value=0.06 Score=58.42 Aligned_cols=78 Identities=19% Similarity=0.238 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCce
Q 036892 295 HIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPV 374 (447)
Q Consensus 295 ~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV 374 (447)
++++.+++.+.-.+++.++. ++.. .+.++.|+++||+++.|.+. + ++.+.||+++
T Consensus 308 ~l~~~l~~~i~~~i~~~L~~----a~l~---~~~I~~VvLvGGssriP~v~-~-----------------~l~~~fg~~~ 362 (675)
T 3d2f_A 308 ELVKPLLERVTEPVTKALAQ----AKLS---AEEVDFVEIIGGTTRIPTLK-Q-----------------SISEAFGKPL 362 (675)
T ss_dssp HHTHHHHTTTTHHHHHHHHH----HTCC---GGGCCEEEEESGGGGSHHHH-H-----------------HHHHHHTSCE
T ss_pred HHHHHHHHHHHHHHHHHHHH----hCCC---hhhCcEEEEECCCccChHHH-H-----------------HHHHhcCCCc
Confidence 33444444444444444433 3432 12389999999999999998 9 9999999988
Q ss_pred eecC-CCCccHHHHHHHHHHhcCC
Q 036892 375 IRPA-DIETTALGAAFAAGLAIGV 397 (447)
Q Consensus 375 ~~~~-~~e~~alGaAllA~~~~g~ 397 (447)
.... ..++.|+|||+.|+.-.|.
T Consensus 363 ~~~~nPdeaVA~GAa~~a~~ls~~ 386 (675)
T 3d2f_A 363 STTLNQDEAIAKGAAFICAIHSPT 386 (675)
T ss_dssp ECCSCTTTHHHHHHHHHHHHTCSS
T ss_pred cccCCcchHHHHHHHHHHHHhCCC
Confidence 6654 5778999999999875553
No 37
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=94.04 E-value=0.73 Score=44.97 Aligned_cols=108 Identities=11% Similarity=-0.003 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecccccc
Q 036892 262 AAVQWLRDSLGVISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDAN 341 (447)
Q Consensus 262 ~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s 341 (447)
...+.+++..+...+.+++.+.+.+- ++ ..+.+++-.+..+...+..+... .+ ++.|++.||.++.
T Consensus 217 al~~~~~~~~~~~~~~~~i~~~a~~g----D~--~a~~~~~~~~~~La~~i~~l~~~--l~------p~~IvlgGgi~~~ 282 (327)
T 4db3_A 217 GFELLYAHYYGEEKKAIDIIKANAAG----DE--KAAEHVERFMELLAICFGNIFTA--ND------PHVVALGGGLSNF 282 (327)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHHHT----CH--HHHHHHHHHHHHHHHHHHHHHHH--HC------CSEEEEESGGGGC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHcC----CH--HHHHHHHHHHHHHHHHHHHHHHH--hC------CCEEEEeCcccch
Confidence 34455555444333556666666532 22 23333333334444444444322 23 5789999998876
Q ss_pred HHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHH
Q 036892 342 LALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAG 392 (447)
Q Consensus 342 ~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~ 392 (447)
+.+.+.+++...== ........+|..... .+++++|||.++.
T Consensus 283 ~~l~~~l~~~l~~~---------~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 283 ELIYEEMPKRVPKY---------LLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp THHHHHHHHHGGGG---------SCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH---------hccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 55553433322100 001112345555553 4578999998763
No 38
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=93.99 E-value=0.034 Score=54.69 Aligned_cols=45 Identities=20% Similarity=0.114 Sum_probs=39.6
Q ss_pred cEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecC-CCCccHHHHHHHHH
Q 036892 330 FLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPA-DIETTALGAAFAAG 392 (447)
Q Consensus 330 ~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~-~~e~~alGaAllA~ 392 (447)
+.|+++||+++.|.+. + ++.+.++.||.+.. ..+++|+|||++|.
T Consensus 279 ~~IvL~GG~s~~p~l~-~-----------------~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLD-T-----------------LLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBTHH-H-----------------HHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccchHHH-H-----------------HHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 5899999999999999 9 99999999998875 46689999998775
No 39
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=93.94 E-value=0.39 Score=48.11 Aligned_cols=103 Identities=17% Similarity=0.082 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccC
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLG 371 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~ 371 (447)
+++|+.+-+.|-.|..+.+.++.+. .. +++|+|+|||++|+.++ + .++..+.
T Consensus 257 s~~Dv~ATLt~~TA~sIa~~~~~~~----~~------~~~v~vcGGGa~N~~Lm-~-----------------~L~~~l~ 308 (371)
T 3qbx_A 257 PAADIQATLLELSARSISESLLDAQ----PD------CEEVLVCGGGAFNTALM-K-----------------RLAMLMP 308 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC----TT------CCEEEEESGGGGCHHHH-H-----------------HHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcc----CC------CceEEEECCccCcHHHH-H-----------------HHHHhCC
Confidence 6888999888888888777765542 23 57999999999999999 8 7777774
Q ss_pred -CceeecCC----CC-ccHHHHHHHHHHhc-CCCCCHHHHhcccccCCCcEEeCCCCH
Q 036892 372 -SPVIRPAD----IE-TTALGAAFAAGLAI-GVFKEEEIFASGERTKTSTTFKPVLNE 422 (447)
Q Consensus 372 -~pV~~~~~----~e-~~alGaAllA~~~~-g~~~~~~~a~~~~~~~~~~~~~P~~~~ 422 (447)
.+|...+. .+ -.|+.-|++|...+ |.-.++......-.....-.+.|.-+.
T Consensus 309 ~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l~g~p~~lp~vTGA~~~~~lG~i~p~~~~ 366 (371)
T 3qbx_A 309 EARVASTDEYGIPPAWMEGMAFAWLAHRFLERLPGNCPDVTGALGPRTLGALYPAGSH 366 (371)
T ss_dssp TSEEEEGGGGTCCTTTHHHHHHHHHHHHHHTTCCCSCHHHHCCSSCCCCCEEECC---
T ss_pred CCEEeCHHHcCCChhHHHHHHHHHHHHHHHcCCCCCCCcccCCCCCccCceeccCCCc
Confidence 67776553 12 24666777776653 444455433221111123456776554
No 40
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.93 E-value=1.1 Score=43.52 Aligned_cols=181 Identities=15% Similarity=0.059 Sum_probs=87.1
Q ss_pred CCcEEeccchhHHhhhc-----CCC-CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccc
Q 036892 186 GIPISGCLGDHHAAMLG-----QAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAI 259 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg-----~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~ 259 (447)
++||.. ..|..++++| .+. ..+-+++++||+--..++.+.+.....++.-..+.|.. .++.=.++. ..+
T Consensus 119 ~~pV~v-~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~---~~~~gclE~-~~S 193 (321)
T 3r8e_A 119 HIHFKI-ENDAKCAALGEYYFGENKRMQTFILLALGTGVGSGVMMNGKLFIGGRGNGTEVGHML---TTRGKSLEN-QVG 193 (321)
T ss_dssp TSEEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCCTTSCCCCGGGCB---CTTSSBSHH-HHS
T ss_pred CCCEEE-EchHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECCEEecCCCCCCccccccc---CCCCCcHHH-hcC
Confidence 778765 4799998765 333 45668899999854444443343322222221222221 122111221 112
Q ss_pred hHHHHHHHHHHcC------------CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccC
Q 036892 260 AGAAVQWLRDSLG------------VISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKD 327 (447)
Q Consensus 260 ~G~~~~W~~~~~~------------~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~ 327 (447)
+-...+.+++... ...+.+++.+.+.+ |++ ..+.+++-.+..+...+..+... .+
T Consensus 194 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~----gD~--~a~~~~~~~~~~La~~i~~l~~~--ld----- 260 (321)
T 3r8e_A 194 INHLIAYTHEQLALDVAKKSSLHTIAELSPKVIADHAAQ----GDA--LALAVWADIGTIIGESLVNIVRV--MD----- 260 (321)
T ss_dssp HHHHHHHHHHHHHHCTTCCCSGGGCSSCCHHHHHHHHHT----TCH--HHHHHHHHHHHHHHHHHHHHHHH--HC-----
T ss_pred HHHHHHHHHHHhhccCcccccccccccCCHHHHHHHHHc----CCH--HHHHHHHHHHHHHHHHHHHHHHH--HC-----
Confidence 2334445544321 01134555555542 222 33444444444444444444332 23
Q ss_pred CccEEEEecccccc-HHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHHH
Q 036892 328 AKFLLRVDGAIDAN-LALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAGL 393 (447)
Q Consensus 328 ~~~~i~~~GG~s~s-~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~~ 393 (447)
++.|++.||.++. +.+.+.+++...-=. +....-..+|..... .+++++|||.++..
T Consensus 261 -P~~IvlgG~i~~~~~~l~~~l~~~l~~~~--------~~~~~~~~~i~~s~l~~~a~~~GAa~l~~~ 319 (321)
T 3r8e_A 261 -LNNILLGGGISGAFDYFVPNLKKAMLEHL--------PTYYTDDMYIGKATLENDAGLLGAAGLIME 319 (321)
T ss_dssp -CCEEEEESGGGGGHHHHHHHHHHHHHHHS--------CHHHHTTCEEEECSSGGGHHHHHHHHHHHC
T ss_pred -CCEEEEeChhcccchHHHHHHHHHHHHhc--------ccccCCCCEEEEcCCCCcHHHHHHHHHHHh
Confidence 5789999998875 555534222211000 000011235555553 45789999998753
No 41
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=93.79 E-value=0.18 Score=54.25 Aligned_cols=110 Identities=18% Similarity=0.154 Sum_probs=79.6
Q ss_pred cchHHHHHHHHHHcCCC-C--CHH-----HHHHHHHhcCC----------CC----------------CHHHHHHHHHHH
Q 036892 258 AIAGAAVQWLRDSLGVI-S--SAS-----EIEELALQVHK----------QG----------------SQLHIARAVLES 303 (447)
Q Consensus 258 ~~~G~~~~W~~~~~~~~-~--~~~-----~l~~~a~~~~~----------~g----------------~~~~l~rAvlEg 303 (447)
.+.|..++=+...+|+. . +|+ +||++|.+... ++ +++++.+++.++
T Consensus 503 SS~GRLFDavAalLGl~~~~~~YEGqaA~~LEalA~~~~~~~~~lp~~i~~~~ld~s~l~~~ll~~g~~~~dIAasFh~a 582 (657)
T 3ttc_A 503 SSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDA 582 (657)
T ss_dssp EEHHHHHHHHHHHHTCSCSSCSSTTHHHHHHHHHHHTCCCCCCCCCCCEETTEECHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred CccchHHHHHHHHcCCCCccCccCchhHHHHHHHHhhCCCccCCceeeccCCcccHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 46788888777777764 2 343 47777765221 11 678888888888
Q ss_pred HHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-CCceeecC----
Q 036892 304 MCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL-GSPVIRPA---- 378 (447)
Q Consensus 304 ia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl-~~pV~~~~---- 378 (447)
++-.+.+......+..| ++.|+++||.++|..++ + .+.+.+ |.+|..+.
T Consensus 583 la~~L~~~~~ra~~~~g--------~~~VvLsGGV~~N~~Lr-e-----------------~L~~~l~g~~v~~p~~~p~ 636 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG--------ITTLVFSGGVIHNRLLR-A-----------------RLAHYLADFTLLFPQSLPA 636 (657)
T ss_dssp HHHHHHHHHHHHHHTTT--------CCEEEEESGGGGCHHHH-H-----------------HHHHHTTTSEEECCCSSCS
T ss_pred HHHHHHHHHHHHHHHcC--------CCEEEEECcHHHHHHHH-H-----------------HHHHHhCCCEEEecCCCCC
Confidence 88888777766655444 57999999999999999 7 777666 77776643
Q ss_pred CCCccHHHHHHHHHH
Q 036892 379 DIETTALGAAFAAGL 393 (447)
Q Consensus 379 ~~e~~alGaAllA~~ 393 (447)
.+.+.++|-|++|+.
T Consensus 637 ~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 637 GDGGLSLGQGVIAAA 651 (657)
T ss_dssp SGGGHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 466788999998863
No 42
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=93.64 E-value=0.1 Score=57.33 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL- 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl- 370 (447)
++.++.+++.+.++-.+.+.+..+.+..| ++.|.++||.++|.+++ + .+.+.+
T Consensus 677 ~~~dIAasfQ~al~~~L~~~~~~a~~~tg--------~~~VvLSGGVa~N~~L~-~-----------------~l~~~L~ 730 (772)
T 4g9i_A 677 SPADIAYSAHLALARAFAHTAVERAREFG--------VKNVALSGGVAYNELIT-K-----------------MIRKVVE 730 (772)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTT--------CSCCCEESSTTCCHHHH-H-----------------HHHHHGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------cCEEEEEchHHHHHHHH-H-----------------HHHHHHH
Confidence 56778888888777777776666655555 46899999999999999 6 554443
Q ss_pred --CCceeec----CCCCccHHHHHHHHHHhcCCC
Q 036892 371 --GSPVIRP----ADIETTALGAAFAAGLAIGVF 398 (447)
Q Consensus 371 --~~pV~~~----~~~e~~alGaAllA~~~~g~~ 398 (447)
|..|.++ ..+.+.|+|.|++|+..+.-+
T Consensus 731 ~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~~~ 764 (772)
T 4g9i_A 731 ANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEGY 764 (772)
T ss_dssp GSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHHTS
T ss_pred HCCCEEEccCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 5566554 356678999999998766433
No 43
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=93.39 E-value=2.7 Score=40.62 Aligned_cols=186 Identities=18% Similarity=0.155 Sum_probs=86.4
Q ss_pred CCcEEeccchhHHhhhc-----CCC-CCCcEEEEecccceeccccCccccccCCCceeeecccc-CCC-----CCCceee
Q 036892 186 GIPISGCLGDHHAAMLG-----QAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKL-GPK-----APTNYAL 253 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg-----~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~-g~~-----~~~~~~~ 253 (447)
++||.. ..|..++++| .+. ..+-+++++||+--..++.+.+.....++.-..+.|.. .+. ..+.-.+
T Consensus 97 ~~pv~v-~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~G~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~gcl 175 (321)
T 3vgl_A 97 GLPVVV-ENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCW 175 (321)
T ss_dssp CSCEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEECCCTTSCCCCGGGSBSSTTCSBCTTSCBSBG
T ss_pred CCCEEE-EehhhhHHHHHHHhCCCCCCCCEEEEEeCcceEEEEEECCEEecCCCCCCccccceEecCCCCCCCCCCcCcH
Confidence 567554 4799998876 333 45668899999844434443333322222111112211 000 0001112
Q ss_pred cccccchHHHHHHHHHHcCC-----------------CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 036892 254 EGSVAIAGAAVQWLRDSLGV-----------------ISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQ 316 (447)
Q Consensus 254 ~g~~~~~G~~~~W~~~~~~~-----------------~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~ 316 (447)
+. ..++-...+.+++.... ..+.+++.+.+.+ |+ ...+.+++-.+..+...+..+.
T Consensus 176 E~-~~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~----gD--~~a~~~~~~~~~~La~~i~~l~ 248 (321)
T 3vgl_A 176 EQ-YASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQ----GD--PVAVDSFRELARWAGAGLADLA 248 (321)
T ss_dssp GG-TSSHHHHHHHHHHHHHHCGGGCHHHHHTTTSSSTTCCHHHHHHHHHT----TC--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-hcCHHHHHHHHHHHhhcCCcchhhhhhcccCccccCCHHHHHHHHHc----CC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11233344455432110 0123444444432 22 2334445555555555554443
Q ss_pred hhhcccccccCCccEEEEecccccc-HHHHHhhhhhcccCccccccchhhhhhcc-CCceeecC-CCCccHHHHHHHHHH
Q 036892 317 KDAVEKGVIKDAKFLLRVDGAIDAN-LALLLSFEKYYYFPFLSFSYFECRSADLL-GSPVIRPA-DIETTALGAAFAAGL 393 (447)
Q Consensus 317 ~~~g~~~~~~~~~~~i~~~GG~s~s-~~~~~q~~~~~~~~~~~~~~~~~~~Advl-~~pV~~~~-~~e~~alGaAllA~~ 393 (447)
.. .+ ++.|++.||.+++ +.+.+.+++...--.+ ..... ..+|.... ..+++++|||.++..
T Consensus 249 ~~--l~------p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~--------~~~~~~~~~i~~s~l~~~a~l~GAa~l~~~ 312 (321)
T 3vgl_A 249 SL--FD------PSAFIVGGGVSDEGELVLDPIRKSFRRWLI--------GGEWRPHAQVLAAQLGGKAGLVGAADLARQ 312 (321)
T ss_dssp HH--HC------CSEEEEESGGGGGTHHHHHHHHHHHHHHCT--------TGGGSCCCEEEECTTGGGHHHHHHHHHHHT
T ss_pred HH--hC------CCEEEEeChhhcchHHHHHHHHHHHHHhcc--------cccccCCCEEEECCCCCcHHHHHHHHHHHh
Confidence 32 33 5789999998875 5554243332210000 00111 23555555 356899999998876
Q ss_pred hc
Q 036892 394 AI 395 (447)
Q Consensus 394 ~~ 395 (447)
++
T Consensus 313 ~~ 314 (321)
T 3vgl_A 313 GL 314 (321)
T ss_dssp C-
T ss_pred hh
Confidence 54
No 44
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=93.15 E-value=0.12 Score=54.52 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=42.5
Q ss_pred ccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccC-Cceeec-CCCCccHHHHHHHHHHhcC
Q 036892 329 KFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLG-SPVIRP-ADIETTALGAAFAAGLAIG 396 (447)
Q Consensus 329 ~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~-~pV~~~-~~~e~~alGaAllA~~~~g 396 (447)
++.|+++||+++.|.+. + ++.+.++ +++... +..++.|+|||+.|+.-.|
T Consensus 331 i~~VvLvGG~srip~v~-~-----------------~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~ 382 (554)
T 1yuw_A 331 IHDIVLVGGSTRIPKIQ-K-----------------LLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG 382 (554)
T ss_dssp CCEEEEESGGGGCHHHH-H-----------------HHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTS
T ss_pred CcEEEEECCcccChHHH-H-----------------HHHHHcCCCccccCCCchhHHHHHHHHHHHHhcC
Confidence 89999999999999998 9 9999995 777655 4567899999999986545
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=93.13 E-value=2.6 Score=40.43 Aligned_cols=183 Identities=21% Similarity=0.105 Sum_probs=88.4
Q ss_pred CCcEEeccchhHHhhhc-----CCC-CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCc---eeeccc
Q 036892 186 GIPISGCLGDHHAAMLG-----QAC-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTN---YALEGS 256 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg-----~g~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~g~ 256 (447)
++||.. ..|..++++| .+. .++-+++++||+--..++.+.+.....++.-..+.|..-. ..+. ..-.|+
T Consensus 99 ~~pv~v-~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~g~l~~G~~g~aGEiGh~~v~-~~g~~c~cg~~gc 176 (302)
T 3vov_A 99 GRPVFL-ENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLL-PGGPACGCGLEGC 176 (302)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETTEECCCTTSCTTCGGGSBSS-TTCCBCTTSCBSB
T ss_pred CCCEEE-EechHHHHHHHHHhCCCCCCCCEEEEEECCceeEEEEECCEEeeCCCCCCccccceEec-CCCCCCCCCCcch
Confidence 567664 4788888765 333 4566889999984443344333332222211111111100 0010 001122
Q ss_pred c---cchHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEE
Q 036892 257 V---AIAGAAVQWLRDSLGVISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLR 333 (447)
Q Consensus 257 ~---~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~ 333 (447)
. .++-...+.+++..+...+.+++.+.+.+ +++ ..+.+++-.+..+...+..+... .+ ++.|+
T Consensus 177 lE~~~s~~~l~~~~~~~~~~~~~~~~i~~~a~~----gd~--~a~~~~~~~~~~l~~~i~~l~~~--~~------p~~iv 242 (302)
T 3vov_A 177 LEALAAGRALERDATYAFQRPVDTRELFRLFQA----GDP--KAERLVLQAARYVGIGLASLVKA--FD------PGVVV 242 (302)
T ss_dssp HHHHHSHHHHHHHHHHHHTSCCCHHHHHHHHHT----TCH--HHHHHHHHHHHHHHHHHHHHHHH--HC------CSEEE
T ss_pred HHHHhCHHHHHHHHHHhhCCCCCHHHHHHHHHc----CCH--HHHHHHHHHHHHHHHHHHHHHHH--HC------CCEEE
Confidence 1 12233445555544433355666666653 232 34444555555555555444432 23 57899
Q ss_pred Eecccc-cc-HHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHHHh
Q 036892 334 VDGAID-AN-LALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAGLA 394 (447)
Q Consensus 334 ~~GG~s-~s-~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~~~ 394 (447)
+.||.+ +. +.+.+.+++...--.+ .....+|..... .+++++|||.++...
T Consensus 243 lgG~i~~~~~~~l~~~l~~~l~~~~~----------~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 296 (302)
T 3vov_A 243 LGGGVALNAPEGYWEALLEAYRRYLQ----------GWEAPPLRRARLGAEAGLLGAALTAYLE 296 (302)
T ss_dssp EESHHHHTSCHHHHHHHHHHHHHTTT----------TSCCCCEEECSSGGGHHHHHHHHHHHHH
T ss_pred EeChhHhhhhHHHHHHHHHHHHHhcc----------hhcCCcEEEcCCCCcHHHHHHHHHHHHH
Confidence 999888 54 5444243332210000 001223555553 457899999988643
No 46
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=92.67 E-value=0.36 Score=51.18 Aligned_cols=80 Identities=20% Similarity=0.156 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccC
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLG 371 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~ 371 (447)
...++.++..+.++-.+.+......+..| ++.|.++||.++|..++ + .+....+
T Consensus 279 ~~~dIAasfQ~~l~~~L~~~~~~a~~~tg--------~~~l~LaGGVa~N~~L~-~-----------------~l~~~~~ 332 (576)
T 3ven_A 279 EYRDLAATAQAALERAVFGLADSVLARTG--------ERTLFVAGGVGLNATMN-G-----------------KLLTRST 332 (576)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CSEEEEESGGGGCHHHH-H-----------------HHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCeEEecchHHHHHHHH-H-----------------HHHHhcC
Confidence 47889998888888888777776655555 56999999999999999 6 4444444
Q ss_pred C-ceeec--CCCCccHHHHHHHHHHhcCC
Q 036892 372 S-PVIRP--ADIETTALGAAFAAGLAIGV 397 (447)
Q Consensus 372 ~-pV~~~--~~~e~~alGaAllA~~~~g~ 397 (447)
. .|.++ ..+.+.++|+|+.+....|.
T Consensus 333 ~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 333 VDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp CSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred CCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 3 55544 35668899999998776553
No 47
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=92.40 E-value=2 Score=41.45 Aligned_cols=38 Identities=16% Similarity=-0.107 Sum_probs=24.2
Q ss_pred CCcEEeccchhHHhhhc---CCC---CCCcEEEEecccceecccc
Q 036892 186 GIPISGCLGDHHAAMLG---QAC---KKGEVKSTYGTGAFILLNT 224 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg---~g~---~~g~~~~s~GTs~~i~~~~ 224 (447)
++||.. ..|..++++| .|. ..+-+++++||+.-..++.
T Consensus 121 ~~pv~v-~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG~giv~ 164 (327)
T 2ap1_A 121 DRDVRL-DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVL 164 (327)
T ss_dssp TSCEEE-EEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEEEEE
T ss_pred CCCEEE-ecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEEEEEEE
Confidence 567554 5899999887 233 2344778999984433333
No 48
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=92.17 E-value=0.099 Score=55.92 Aligned_cols=51 Identities=20% Similarity=0.210 Sum_probs=43.2
Q ss_pred CccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecC-CCCccHHHHHHHHHHhcC
Q 036892 328 AKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPA-DIETTALGAAFAAGLAIG 396 (447)
Q Consensus 328 ~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~-~~e~~alGaAllA~~~~g 396 (447)
.++.|+++||.++.|.+. + ++.+.||+++.... ..++.|+|||+.|+.-.|
T Consensus 333 ~i~~VvLvGG~srip~v~-~-----------------~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~ 384 (605)
T 2kho_A 333 DIDDVILVGGQTRMPMVQ-K-----------------KVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp TCSEEEEESGGGGSHHHH-H-----------------HHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTT
T ss_pred hCceEEEECCcccChHHH-H-----------------HHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcC
Confidence 389999999999999999 9 99999998876554 467899999999976444
No 49
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.02 E-value=0.35 Score=47.84 Aligned_cols=62 Identities=16% Similarity=0.066 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhh-cccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDA-VEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~-g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl 370 (447)
...++++..++.+.-.+++.++...... ... ++.|+++||+++.+.+. + ++++.|
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~------~~~IvL~GG~s~~p~l~-~-----------------~l~~~l 330 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEAS------PEVGYLLGGGSKLRGLA-S-----------------LLTDTL 330 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---C------CSEEEEESGGGGSTTHH-H-----------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC------cCEEEEECccccchhHH-H-----------------HHHHHh
Confidence 4566778888888888888887653211 223 78999999999999999 8 888888
Q ss_pred CCceeec
Q 036892 371 GSPVIRP 377 (447)
Q Consensus 371 ~~pV~~~ 377 (447)
+.||.+.
T Consensus 331 ~~~v~~~ 337 (377)
T 2ych_A 331 GVNLEPV 337 (377)
T ss_dssp TSEEEEC
T ss_pred CCCeEec
Confidence 8888875
No 50
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=91.89 E-value=1.3 Score=41.94 Aligned_cols=179 Identities=17% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCcEEeccchhHHhhhcC---CC--CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCcee---ecccc
Q 036892 186 GIPISGCLGDHHAAMLGQ---AC--KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYA---LEGSV 257 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g~--~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~g~~ 257 (447)
++||.. ..|..++++|- |. ...-+++++||+--..++.+.+.....++....+.|..... .+.+. -.|+.
T Consensus 97 ~~pv~v-~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGiG~gii~~G~l~~G~~g~aGE~Gh~~~~~-~g~~c~cG~~gcl 174 (289)
T 2aa4_A 97 NLPTIA-INDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADP-HGPVCGCGRTGCV 174 (289)
T ss_dssp CSCEEE-EEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEEEETTEEECCTTSCCCCGGGSBSCT-TSCBCTTSCBSBH
T ss_pred CCCEEE-echHHHHHHHHHHhCCCCCceEEEEEeCccEEEEEEECCEEeeCCCCCCccCCcEEECC-CCCcCCCCCchhH
Confidence 466655 47999998873 32 12668899999844333343333222222211222221100 11110 01111
Q ss_pred c--chHH-HHHHHHHHcCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEE
Q 036892 258 A--IAGA-AVQWLRDSLGVISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRV 334 (447)
Q Consensus 258 ~--~~G~-~~~W~~~~~~~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~ 334 (447)
. .++. ..+++++ .+...+.+++.+.+.+ ++ ...+.+++-.+..+...+..+... .+ ++.|++
T Consensus 175 e~~~s~~~l~~~~~~-~~~~~~~~~v~~~a~~----gd--~~a~~i~~~~~~~L~~~i~~l~~~--l~------p~~ivl 239 (289)
T 2aa4_A 175 EAIASGRGIAAAAQG-ELAGADAKTIFTRAGQ----GD--EQAQQLIHRSARTLARLIADIKAT--TD------CQCVVV 239 (289)
T ss_dssp HHHHSHHHHHHTCCG-GGTTCCHHHHHHHHHT----TC--HHHHHHHHHHHHHHHHHHHHHHHH--HC------CSEEEE
T ss_pred HHHhCHHHHHHHHHH-hccCCCHHHHHHHHHc----CC--HHHHHHHHHHHHHHHHHHHHHHHh--cC------CCEEEE
Confidence 1 1122 1222111 1111244555555542 22 223333444444444444444322 23 477888
Q ss_pred eccccccHHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHH
Q 036892 335 DGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAG 392 (447)
Q Consensus 335 ~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~ 392 (447)
.||.+.++.+.+.+++...-= . . -...+|..... .+++++|||.++.
T Consensus 240 gG~~~~~~~~~~~l~~~l~~~-~-------~---~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 240 GGSVGLAEGYLALVETYLAQE-P-------A---AFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp EHHHHTSTTHHHHHHHHHTTS-C-------G---GGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred eCcccccHHHHHHHHHHHHHh-c-------C---ccCCEEEECCCCCchHHHHHHHHHh
Confidence 888876555553533332110 0 0 01445665554 4578999998863
No 51
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=91.39 E-value=5.2 Score=38.31 Aligned_cols=38 Identities=29% Similarity=0.272 Sum_probs=25.3
Q ss_pred CCcEEeccchhHHhhhcC---C--C-CCCcEEEEecccceecccc
Q 036892 186 GIPISGCLGDHHAAMLGQ---A--C-KKGEVKSTYGTGAFILLNT 224 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g--~-~~g~~~~s~GTs~~i~~~~ 224 (447)
++||.. ..|..++++|- | . ...-+++++||+.-..++.
T Consensus 109 ~~pv~v-~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~giv~ 152 (326)
T 2qm1_A 109 GIPFAL-DNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVA 152 (326)
T ss_dssp CSCEEE-EEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEE
T ss_pred CCCEEE-ecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEE
Confidence 567665 57999988762 2 3 3556889999985444444
No 52
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=90.82 E-value=7.2 Score=37.81 Aligned_cols=38 Identities=21% Similarity=0.068 Sum_probs=25.3
Q ss_pred CCcEEeccchhHHhhhcC---C--C-CCCcEEEEecccceecccc
Q 036892 186 GIPISGCLGDHHAAMLGQ---A--C-KKGEVKSTYGTGAFILLNT 224 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g--~-~~g~~~~s~GTs~~i~~~~ 224 (447)
++||.. ..|..++++|- | . ..+-+++++||+--..++.
T Consensus 132 ~~pv~v-~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG~gii~ 175 (343)
T 2yhw_A 132 HLPVWV-DNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIH 175 (343)
T ss_dssp CSCEEE-EEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEEEEEEE
T ss_pred CCCEEE-echhHHHHHHHHHhCCCCCCCcEEEEEECCCEEEEEEE
Confidence 567665 57999998873 2 2 3456889999984433334
No 53
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=90.60 E-value=0.8 Score=45.83 Aligned_cols=83 Identities=20% Similarity=0.188 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc-
Q 036892 292 SQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL- 370 (447)
Q Consensus 292 ~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl- 370 (447)
+++|+.+-+.|-.|..+.+.++.+ . . .++|+|+|||++|+.++ + .++..+
T Consensus 264 ~~~Dv~ATLt~~TA~sIa~~~~~~----~-~------~~~v~vcGGGa~N~~Lm-~-----------------~L~~~l~ 314 (370)
T 3cqy_A 264 NEEDIQSTLLDLTCHSIAQDILKL----A-Q------EGELFVCGGGAFNAELM-Q-----------------RLAALLP 314 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH----C-S------SEEEEEESGGGGCHHHH-H-----------------HHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc----C-C------CCEEEEECCCcCCHHHH-H-----------------HHHHhCC
Confidence 588999999888888877776544 2 3 57999999999999999 8 777777
Q ss_pred CCceeecCC----CC-ccHHHHHHHHHHhc-CCCCCHHH
Q 036892 371 GSPVIRPAD----IE-TTALGAAFAAGLAI-GVFKEEEI 403 (447)
Q Consensus 371 ~~pV~~~~~----~e-~~alGaAllA~~~~-g~~~~~~~ 403 (447)
+.+|...+. .+ --|+.-|.+|...+ |.-.++..
T Consensus 315 ~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~l~g~p~nlp~ 353 (370)
T 3cqy_A 315 GYRIDTTSALGVDPKWAEGIAFAWLAMRYQLGLPANLPA 353 (370)
T ss_dssp TEEEEEGGGGTCCTTTHHHHHHHHHHHHHHTTCCCCCHH
T ss_pred CCeeeeHHHhCCChhHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 456655432 12 24566677776553 44444443
No 54
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=89.86 E-value=9.8 Score=37.84 Aligned_cols=182 Identities=12% Similarity=0.060 Sum_probs=83.3
Q ss_pred CCcEEeccchhHHhhhcC---C--C-CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCC---ceeeccc
Q 036892 186 GIPISGCLGDHHAAMLGQ---A--C-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPT---NYALEGS 256 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g--~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~g~ 256 (447)
++||.. ..|..++++|- | . ...-+++++||+--..++.+.+.....++.-..+.|..... .+ ...-.|+
T Consensus 187 ~~pv~v-~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~AGEiGh~~v~~-~g~~c~cG~~gc 264 (406)
T 1z6r_A 187 GVPVYI-QHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDP-YGKRCYCGNHGC 264 (406)
T ss_dssp SSCEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEETTEETTTTSSCCBCGGGSBSCT-TSCBCTTSCBSB
T ss_pred CCCEEE-echhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEECCEEeecCCCcCccCCceEecC-CCCCCCCCCccc
Confidence 567665 57999998762 3 2 35568899999854444443333322222211222221100 01 0001122
Q ss_pred cc---chHHHHHHHHHHc--------C-CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 036892 257 VA---IAGAAVQWLRDSL--------G-VISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGV 324 (447)
Q Consensus 257 ~~---~~G~~~~W~~~~~--------~-~~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~ 324 (447)
.. ++-...+.+++.+ . ...+.+++.+.+.+ +++ ..+.+++-.+..+...+..+... .+
T Consensus 265 lE~~~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~----gD~--~a~~~l~~~~~~L~~~i~~l~~~--ld-- 334 (406)
T 1z6r_A 265 LETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALR----GDL--LAKDIITGVGAHVGRILAIMVNL--FN-- 334 (406)
T ss_dssp THHHHSHHHHHHHHHHHHTTCTTCGGGSSCCCHHHHHHHHHT----TCH--HHHHHHHHHHHHHHHHHHHHHHH--HC--
T ss_pred hHHHcCHHHHHHHHHHhhhcccccccCcccCCHHHHHHHHHc----CCH--HHHHHHHHHHHHHHHHHHHHHHh--cC--
Confidence 21 2223344444421 0 11234555555542 222 23444444444444444444332 23
Q ss_pred ccCCccEEEEecccccc-HHHHHhhhhhcccCccccccchhhhhhccCCceeecC-CCCccHHHHHHHH
Q 036892 325 IKDAKFLLRVDGAIDAN-LALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPA-DIETTALGAAFAA 391 (447)
Q Consensus 325 ~~~~~~~i~~~GG~s~s-~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~-~~e~~alGaAllA 391 (447)
++.|++.||.++. +.+.+.+++...-=. +....-..+|.... ..+++++|||++.
T Consensus 335 ----P~~IvlgG~i~~~~~~l~~~i~~~l~~~~--------~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 335 ----PQKILIGSPLSKAADILFPVISDSIRQQA--------LPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp ----CSEEEEESGGGGGHHHHHHHHHHHHHHHS--------CHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred ----CCEEEEeCccchhhHHHHHHHHHHHHHhc--------ccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 5788888988763 555534322211000 00001235666655 3567999997654
No 55
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=88.23 E-value=0.37 Score=49.08 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-----hcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhh
Q 036892 293 QLHIARAVLESMCFQVKDVLDSLQKD-----AVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSA 367 (447)
Q Consensus 293 ~~~l~rAvlEgia~~~~~~l~~l~~~-----~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~A 367 (447)
..+++++.+|-+.-.+++.++...-. .... ++.|+++||+++-+.+. + +++
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~------~~~IvLtGG~s~lpgl~-e-----------------~~~ 349 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGI------PGGVVLTGGGAKIPRIN-E-----------------LAT 349 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC--------------TTCEEEESGGGGSTTHH-H-----------------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc------CCEEEEECchhchhhHH-H-----------------HHH
Confidence 46678888888888888877665310 0122 67899999999999999 9 999
Q ss_pred hccCCceeecC
Q 036892 368 DLLGSPVIRPA 378 (447)
Q Consensus 368 dvl~~pV~~~~ 378 (447)
+.||.||.+..
T Consensus 350 ~~~g~~vri~~ 360 (419)
T 4a2a_A 350 EVFKSPVRTGC 360 (419)
T ss_dssp HHHTSCEEECC
T ss_pred HHHCCCeEEEe
Confidence 99999998655
No 56
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=87.64 E-value=0.7 Score=44.81 Aligned_cols=43 Identities=7% Similarity=-0.086 Sum_probs=34.3
Q ss_pred ccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCC---ceeecCC-CCccHHHHHHHH
Q 036892 329 KFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGS---PVIRPAD-IETTALGAAFAA 391 (447)
Q Consensus 329 ~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~---pV~~~~~-~e~~alGaAllA 391 (447)
++.|+++||+++- +. + .+.+.++. ++.++.+ .+++|+|+++++
T Consensus 273 ~~~vvl~GGga~l--l~-~-----------------~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--IC-D-----------------AVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HH-H-----------------HHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HH-H-----------------HHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 6899999999864 55 7 88888988 5776665 558999999864
No 57
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=87.10 E-value=14 Score=37.03 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=25.7
Q ss_pred CCcEEeccchhHHhhhcC-----CC-CCCcEEEEecccceecccc
Q 036892 186 GIPISGCLGDHHAAMLGQ-----AC-KKGEVKSTYGTGAFILLNT 224 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~-----g~-~~g~~~~s~GTs~~i~~~~ 224 (447)
|+||.. ..|..++++|- +. ...-+++++||+--..++.
T Consensus 209 ~~pV~v-~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~ 252 (429)
T 1z05_A 209 GLPVFV-ANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVL 252 (429)
T ss_dssp CSCEEE-EEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEE
T ss_pred CCCEEE-echhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEE
Confidence 677665 47999998763 23 4566889999984444444
No 58
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=86.02 E-value=3.3 Score=43.26 Aligned_cols=117 Identities=13% Similarity=0.030 Sum_probs=74.2
Q ss_pred chHHHHHHHHHHcCCCC-CHHHHHHHHHhcC-----C-----------------------CCCHHHHHHHHHHHHHHHHH
Q 036892 259 IAGAAVQWLRDSLGVIS-SASEIEELALQVH-----K-----------------------QGSQLHIARAVLESMCFQVK 309 (447)
Q Consensus 259 ~~G~~~~W~~~~~~~~~-~~~~l~~~a~~~~-----~-----------------------~g~~~~l~rAvlEgia~~~~ 309 (447)
+.|.+++=+...+|+.. .-..++++|.+.. | +.+++++.+++.+.++-.+.
T Consensus 158 s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~~~~~~p~~~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~ 237 (540)
T 3en9_A 158 AVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLT 237 (540)
T ss_dssp CHHHHHHHHHHHTTCCSSCHHHHHHHHHTCCCCCCCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHcCCCCCCHHHHHHHHHcCCccCcCCCCCCCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 46777777766676531 1235666665431 0 01578888888888888877
Q ss_pred HHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc---CCceeecC----CCCc
Q 036892 310 DVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL---GSPVIRPA----DIET 382 (447)
Q Consensus 310 ~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl---~~pV~~~~----~~e~ 382 (447)
+......+..| .+.|+++||.+.|..++ + .+...+ |.+|..++ .+.+
T Consensus 238 ~~~~~a~~~~~--------~~~~~~~GGVa~N~~l~-~-----------------~l~~~~~~~~~~~~~p~~~~~~Dng 291 (540)
T 3en9_A 238 EITERALAHTN--------KGEVMLVGGVAANNRLR-E-----------------MLKAMCEGQNVDFYVPPKEFCGDNG 291 (540)
T ss_dssp HHHHHHHHHHT--------CSEEEEESGGGGCHHHH-H-----------------HHHHHHHHTTCEEECCCHHHHSSCH
T ss_pred HHHHHHHHHhC--------CCeEEEeCcHHhHHHHH-H-----------------HHHHHHHhcCCEEEeCCCcCCCCCH
Confidence 77666554455 46899999999999999 7 665544 66787765 3344
Q ss_pred cHHHHHHHHHHhcCCCCCH
Q 036892 383 TALGAAFAAGLAIGVFKEE 401 (447)
Q Consensus 383 ~alGaAllA~~~~g~~~~~ 401 (447)
+.+|.+-.-....|...++
T Consensus 292 amia~~~~~~~~~g~~s~l 310 (540)
T 3en9_A 292 AMIAWLGLLMHKNGRWMSL 310 (540)
T ss_dssp HHHHHHHHHHHHTCCCCCG
T ss_pred HHHHHHHHHHHHcCCCCcc
Confidence 4455443333344555444
No 59
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=84.26 E-value=21 Score=34.11 Aligned_cols=24 Identities=13% Similarity=0.153 Sum_probs=18.3
Q ss_pred eeEEEEcCcccceEEEeCCCCcccc
Q 036892 23 LKAIGLTNQRETTVLWSKSTGCPLY 47 (447)
Q Consensus 23 I~aI~vs~q~~~~v~vD~~~g~pl~ 47 (447)
+.+|-|.+..-.+.++|. +|+.+.
T Consensus 9 ~lgiDiGgt~i~~~l~d~-~G~il~ 32 (310)
T 3htv_A 9 VAGVDMGATHIRFCLRTA-EGETLH 32 (310)
T ss_dssp EEEEEECSSEEEEEEEET-TSCEEE
T ss_pred EEEEEeCCCEEEEEEECC-CCCEEE
Confidence 566777777777888998 898764
No 60
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=82.75 E-value=2.3 Score=42.51 Aligned_cols=46 Identities=13% Similarity=0.196 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHH-HHHh
Q 036892 296 IARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLA-LLLS 347 (447)
Q Consensus 296 l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~-~~~q 347 (447)
..+.+++-.+..+...+-.+....+.+ ++.|+++||.+.+.. +.++
T Consensus 269 ~a~~~l~~~~~~la~~i~~l~~~l~~~------p~~IvlgGgi~~~~~~l~~~ 315 (381)
T 1saz_A 269 WAKRVYRAMAYQIAKWIGKMAAVLKGE------VDFIVLTGGLAHEKEFLVPW 315 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC------CSEEEEEEGGGGCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC------CCEEEEeCcCccChHHHHHH
Confidence 345566666666666666554433124 589999999987533 4424
No 61
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=81.82 E-value=5 Score=39.74 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=27.5
Q ss_pred CCcEEeccchhHHhhhcC---CC-CCCcEEEEecccceeccccCcc
Q 036892 186 GIPISGCLGDHHAAMLGQ---AC-KKGEVKSTYGTGAFILLNTGEE 227 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g~-~~g~~~~s~GTs~~i~~~~~~~ 227 (447)
++||.. ..|..++++|- |. +..-+++++||+--..++.+.+
T Consensus 189 ~~pV~v-~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G~ 233 (380)
T 2hoe_A 189 GIEVWV-ENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDGE 233 (380)
T ss_dssp CSEEEE-EEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETTE
T ss_pred CCCEEE-echHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECCE
Confidence 567655 48999998874 34 4566889999985444444333
No 62
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=81.30 E-value=4.6 Score=38.28 Aligned_cols=73 Identities=12% Similarity=-0.016 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceee
Q 036892 297 ARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIR 376 (447)
Q Consensus 297 ~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~ 376 (447)
.+.+++-.+..+...+..+... .+ ++.|++.||.++++.+.+. +...+-..+|..
T Consensus 216 a~~il~~~~~~La~~i~~l~~~--l~------p~~IvlgGgv~~~~~~~~~-----------------l~~~~~~~~i~~ 270 (299)
T 2e2o_A 216 AMDILKQGAELLASQAVYLARK--IG------TNKVYLKGGMFRSNIYHKF-----------------FTLYLEKEGIIS 270 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HT------CSEEEEESGGGGSHHHHHH-----------------HHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--cC------CCEEEEECCccCcHHHHHH-----------------HHHHCCCCeEec
Confidence 3444444444444444444332 23 5789999998877666634 333333347776
Q ss_pred cCCCCccHHHHHHHHHHh
Q 036892 377 PADIETTALGAAFAAGLA 394 (447)
Q Consensus 377 ~~~~e~~alGaAllA~~~ 394 (447)
....++.++|||.++...
T Consensus 271 ~~~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 271 DLGKRSPEIGAVILAYKE 288 (299)
T ss_dssp ECCSCCHHHHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHh
Confidence 664457899999998654
No 63
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=76.51 E-value=44 Score=32.60 Aligned_cols=82 Identities=10% Similarity=-0.030 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecc-ccccHHHHH------hhhhhcccCccccccchhhhhhc
Q 036892 297 ARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGA-IDANLALLL------SFEKYYYFPFLSFSYFECRSADL 369 (447)
Q Consensus 297 ~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG-~s~s~~~~~------q~~~~~~~~~~~~~~~~~~~Adv 369 (447)
.+.+++-.+..+...+..+... .. ++.|++.|| .++++.+.+ ++++++. |.. +. ..+.
T Consensus 281 a~~~l~~~~~~L~~~i~~l~~~--l~------p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~-~~~----~~--~~~~ 345 (373)
T 2q2r_A 281 ACKAMKKYHEYLMRVGSEASMA--LL------PLTIVLVGDNIVNNAFFYRNPQNLKEMHHEAL-NHE----ME--RFGF 345 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC------CSEEEECSHHHHHTHHHHHSHHHHHHHHHHHT-CSG----GG--GGTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HC------CCEEEEeCChHhCchhhhcchhHHHHHHHHHh-hcc----cc--hhhh
Confidence 3444444444444444444332 23 466777777 666666654 3332221 100 00 0111
Q ss_pred -cCCceeecC-CCCccHHHHHHHHHH
Q 036892 370 -LGSPVIRPA-DIETTALGAAFAAGL 393 (447)
Q Consensus 370 -l~~pV~~~~-~~e~~alGaAllA~~ 393 (447)
-..||.+.. ..+++++|||.++..
T Consensus 346 ~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 346 QSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp GGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hcCCcEEEEecCCchhHHHHHHHHHh
Confidence 135676653 457899999988753
No 64
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=71.75 E-value=9.6 Score=37.26 Aligned_cols=66 Identities=21% Similarity=0.232 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCceee
Q 036892 298 RAVLESMCFQVKDVLDS-LQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIR 376 (447)
Q Consensus 298 rAvlEgia~~~~~~l~~-l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~ 376 (447)
+.+++-++-.+.+.++. +++ ..-. ++.|+++||+++= +. + ++.+.++.. .+
T Consensus 272 ~~~i~~~~~~i~~~i~~~l~~-~~~~------i~~IvL~GGga~l--l~-~-----------------~l~~~~~~~-~i 323 (346)
T 2fsj_A 272 GPILEDLANRIIENIRLNLRG-EVDR------VTSLIPVGGGSNL--IG-D-----------------RFEEIAPGT-LV 323 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG-GGGG------EEEEEEESTTHHH--HG-G-----------------GGGGGSTTC-BC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hhhc------ccEEEEECCcHHH--HH-H-----------------HHHHHCcCc-EE
Confidence 55555555555554444 332 2112 7899999998874 55 7 778888743 33
Q ss_pred ---cCCC-CccHHHHHHHH
Q 036892 377 ---PADI-ETTALGAAFAA 391 (447)
Q Consensus 377 ---~~~~-e~~alGaAllA 391 (447)
.+++ ++.|+|+..++
T Consensus 324 ~~~~~~P~~ava~G~~~~~ 342 (346)
T 2fsj_A 324 KIKPEDLQFANALGYRDAA 342 (346)
T ss_dssp CCCTTTTTTHHHHHHHHHH
T ss_pred eccCCCcHHHHHHHHHHHH
Confidence 4444 78999998765
No 65
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=71.60 E-value=8.9 Score=39.36 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=21.5
Q ss_pred CCceeecCCCCccHHHHHHHHHHhc
Q 036892 371 GSPVIRPADIETTALGAAFAAGLAI 395 (447)
Q Consensus 371 ~~pV~~~~~~e~~alGaAllA~~~~ 395 (447)
+.+|......+++.+|||++|+++.
T Consensus 420 ~~~v~~~~~~dgsg~GAAl~aa~~~ 444 (457)
T 2yhx_A 420 SKPIXITPAIDGXGAASXVIXSIAS 444 (457)
T ss_dssp GSSEEEEECCCTTTHHHHHHHHHHH
T ss_pred CcceEEEECCCchhhhHHHHHHHHh
Confidence 4578888888999999999999875
No 66
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=68.49 E-value=12 Score=36.30 Aligned_cols=72 Identities=17% Similarity=0.024 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccCCc
Q 036892 294 LHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLGSP 373 (447)
Q Consensus 294 ~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~p 373 (447)
.+.++..++-++-.+.+.+... +.++ ..++.|+++||++. ++. + .+.+.++.+
T Consensus 251 ~~~i~~~~~e~~~~I~~~i~~~----~~~~---~~~~~IvltGGGA~--l~~-~-----------------~l~~~~~~~ 303 (329)
T 4apw_A 251 STVIKKVKEKFLKDAIKLIEKR----GFKL---DQLDSLIFIGGTTQ--KLK-E-----------------QISKTYPNN 303 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH----TCCT---TSCSEEEEESTTHH--HHH-H-----------------HHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCH---HHccEEEEECChHH--HHH-H-----------------HHHHHcCCC
Confidence 3455555555544444333332 2221 11478999999886 345 7 888889988
Q ss_pred eeecCCCC-ccHHHHHHHHH
Q 036892 374 VIRPADIE-TTALGAAFAAG 392 (447)
Q Consensus 374 V~~~~~~e-~~alGaAllA~ 392 (447)
+.+++++. +.|+|+..++.
T Consensus 304 v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 304 SIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp EECCSSGGGHHHHHHHHHHH
T ss_pred CEecCCChhhHHHHHHHHHh
Confidence 98888655 79999887764
No 67
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=64.61 E-value=6.5 Score=43.98 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=23.9
Q ss_pred EEeccchhHHhhhcCCC--CCCcEEEEeccccee
Q 036892 189 ISGCLGDHHAAMLGQAC--KKGEVKSTYGTGAFI 220 (447)
Q Consensus 189 V~~g~gD~~aa~lg~g~--~~g~~~~s~GTs~~i 220 (447)
+++-.-|+.++++|-.- ....+.+++||+.--
T Consensus 203 ~val~NDa~~tll~e~~~~~~~~iglilGTGvng 236 (917)
T 1cza_N 203 IVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNA 236 (917)
T ss_dssp EEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEE
T ss_pred EEEEEEhhHHHHHHhhccCCCcEEEEEEECCcce
Confidence 46667899999998654 345577899998543
No 68
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=61.72 E-value=27 Score=33.50 Aligned_cols=33 Identities=18% Similarity=0.083 Sum_probs=24.5
Q ss_pred CCcEEeccchhHHhhhcCCCCCCcEEEEeccccee
Q 036892 186 GIPISGCLGDHHAAMLGQACKKGEVKSTYGTGAFI 220 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~g~~~g~~~~s~GTs~~i 220 (447)
+.||.. ..|..++++|. ...+-+++++||+...
T Consensus 102 ~~pv~v-~NDa~aaa~a~-~~~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 102 SESYLI-TTDAAGSIATA-TPDGGVVLISGTGSNC 134 (347)
T ss_dssp BSCEEE-EEHHHHHHHHH-CSSCEEEEEESSSEEE
T ss_pred CceEEE-ECcHHHHHHhh-CCCCcEEEEEcCCcee
Confidence 467766 47999999983 3456688999998544
No 69
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=59.53 E-value=19 Score=37.27 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhhhcccccccCCccEEEEeccccc-cHHHHHhhhhhcccCccccccchhhhhh
Q 036892 294 LHIARAVLESMCFQVKDVL----DSLQKDAVEKGVIKDAKFLLRVDGAIDA-NLALLLSFEKYYYFPFLSFSYFECRSAD 368 (447)
Q Consensus 294 ~~l~rAvlEgia~~~~~~l----~~l~~~~g~~~~~~~~~~~i~~~GG~s~-s~~~~~q~~~~~~~~~~~~~~~~~~~Ad 368 (447)
..++|-|.+.|.-...+.+ -.+-...+.+ .-.|-+.|+.-+ .|.+. + +++..+.+
T Consensus 377 ~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~------~~~VgvdGSv~~~~P~f~-~-------------~~~~~l~~ 436 (485)
T 3o8m_A 377 RKLIRKLAELVGTRAARLTVCGVSAICDKRGYK------TAHIAADGSVFNRYPGYK-E-------------KAAQALKD 436 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS------SEEEEEESHHHHHSTTHH-H-------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC------ceEEEEecChhccCccHH-H-------------HHHHHHHH
Confidence 4456666666655443332 2222223433 334666787654 45554 3 12224445
Q ss_pred cc--------CCceeecCCCCccHHHHHHHHHHhcC
Q 036892 369 LL--------GSPVIRPADIETTALGAAFAAGLAIG 396 (447)
Q Consensus 369 vl--------~~pV~~~~~~e~~alGaAllA~~~~g 396 (447)
++ +.+|......+++.+|||++|+++..
T Consensus 437 ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 437 IYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp HHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred HhccccccCCCceEEEEEcCCChHHHHHHHHHHHHH
Confidence 54 46788878889999999999998863
No 70
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=56.20 E-value=41 Score=31.86 Aligned_cols=116 Identities=16% Similarity=0.054 Sum_probs=69.5
Q ss_pred chhHHhhhcCCC--CCCcEEEEecccceeccccCccccccCCCceeeeccccCCCCCCceeecccccchHHHHHHHHHHc
Q 036892 194 GDHHAAMLGQAC--KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSL 271 (447)
Q Consensus 194 gD~~aa~lg~g~--~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~G~~~~W~~~~~ 271 (447)
.|=.++++|+-. ...-+++.+||...+.++. ..|. |. |.+..=|. ...++=|.+.-
T Consensus 123 aDR~~~avaA~~~y~~~~iVVD~GTAtT~D~V~-------~~G~-----~l------GG~I~PGi----~l~~~AL~~~T 180 (271)
T 2f9w_A 123 LDRWLALVAAHHLAKKACLVIDLGTAVTSDLVA-------ADGV-----HL------GGYICPGM----TLMRSQLRTHT 180 (271)
T ss_dssp HHHHHHHHHHHHHHSSCEEEEEESSEEEEEEEC-------TTSB-----EE------EEEEEECH----HHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCceEEEEEC-------CCCe-----EE------EEEECCCH----HHHHHHHHHhh
Confidence 599999999765 4556889999997775443 1111 11 11111111 22233333332
Q ss_pred CCCCCHHHHHHH--HHhcC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecccc
Q 036892 272 GVISSASEIEEL--ALQVH-KQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAID 339 (447)
Q Consensus 272 ~~~~~~~~l~~~--a~~~~-~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s 339 (447)
..... .+++.. ....+ ..+|...|-..++.|.+..+..+++.++++.+.+ -.|+++||.+
T Consensus 181 A~Lp~-v~~~~~~~~~~~~iG~nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~~~-------~~vi~TGG~a 243 (271)
T 2f9w_A 181 RRIRY-DDAEARRALASLQPGQATAEAVERGCLLMLRGFVREQYAMACELLGPD-------CEIFLTGGDA 243 (271)
T ss_dssp SSCCC-CHHHHHHHTTCCSCBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT-------CEEEEESTTG
T ss_pred hcCCC-ccccccccCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CEEEEECCCH
Confidence 22111 122211 11121 2358999999999999999999999998877644 5799999965
No 71
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=53.86 E-value=1.7e+02 Score=28.66 Aligned_cols=148 Identities=20% Similarity=0.168 Sum_probs=70.1
Q ss_pred CCcEEeccchhHHhhhcC---C---------------C-CCCcEEEEecccceeccccCccccccCCCceeeeccccCCC
Q 036892 186 GIPISGCLGDHHAAMLGQ---A---------------C-KKGEVKSTYGTGAFILLNTGEEVVKSKHELLSTLAFKLGPK 246 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~---g---------------~-~~g~~~~s~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (447)
|+||.. ..|..|+++|- | . ..+-+++++||+--..++.+.+.....++.-..+.|.. ..
T Consensus 109 g~PV~v-eNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~~ 186 (366)
T 3mcp_A 109 GIPVFI-NNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-NK 186 (366)
T ss_dssp CSCEEE-ECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-CS
T ss_pred CCCEEE-echhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-CC
Confidence 667654 47888888762 3 2 34558899999854444443333322222111111111 00
Q ss_pred CCCceeecccccchHHHHHHHHHHcCC--CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 036892 247 APTNYALEGSVAIAGAAVQWLRDSLGV--ISSASEIEELALQVHKQGSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGV 324 (447)
Q Consensus 247 ~~~~~~~~g~~~~~G~~~~W~~~~~~~--~~~~~~l~~~a~~~~~~g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~ 324 (447)
..+.-.+|. ..++-...+.+++..+. ..+.+++.+.+..... |+. ...+.+++-.+..+...+..+... .+
T Consensus 187 CG~~GclE~-~~S~~al~~~~~~~~~~~~~~~~~~i~~~a~~~~~-gD~-~~a~~~l~~~~~~Lg~~i~nl~~~--ld-- 259 (366)
T 3mcp_A 187 KYPEYIVEE-SVSIRAVMRVYAERSGDAGARTPKEIFEIAEGIRP-GNR-EAAIAAFEELGEMAGDALASAITL--ID-- 259 (366)
T ss_dssp SCTTSBGGG-TSSHHHHHHHHHHHSSCCSCCCHHHHHHHHHTSSC-SCH-HHHHHHHHHHHHHHHHHHHHHHHH--HC--
T ss_pred CCCCcceee-eecHHHHHHHHHHhhCCCCCCCHHHHHHHHhhhhc-CCH-HHHHHHHHHHHHHHHHHHHHHHHH--HC--
Confidence 011112232 11233345556554431 2356677776652211 231 233444444444444444444322 34
Q ss_pred ccCCccEEEEeccccc-cHHHHHh
Q 036892 325 IKDAKFLLRVDGAIDA-NLALLLS 347 (447)
Q Consensus 325 ~~~~~~~i~~~GG~s~-s~~~~~q 347 (447)
+ .|++.||.++ .+.+.+.
T Consensus 260 ----P-~IviGGgi~~~~~~~~~~ 278 (366)
T 3mcp_A 260 ----G-LIVIGGGLSGASKYILPV 278 (366)
T ss_dssp ----S-EEEEESGGGGGHHHHHHH
T ss_pred ----C-EEEEEChhhhchHHHHHH
Confidence 7 8888888887 4555434
No 72
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=52.34 E-value=22 Score=36.34 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=25.0
Q ss_pred CCc--EEeccchhHHhhhcCCC-CC-CcEEEEeccccee
Q 036892 186 GIP--ISGCLGDHHAAMLGQAC-KK-GEVKSTYGTGAFI 220 (447)
Q Consensus 186 g~p--V~~g~gD~~aa~lg~g~-~~-g~~~~s~GTs~~i 220 (447)
|+| |++-.-|+.+++++..- .+ ..+.+++||+.-.
T Consensus 186 ~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na 224 (451)
T 1bdg_A 186 ELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNV 224 (451)
T ss_dssp TCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEE
T ss_pred CCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcce
Confidence 455 45666899999998766 44 4477899998543
No 73
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=50.67 E-value=50 Score=31.64 Aligned_cols=24 Identities=17% Similarity=0.073 Sum_probs=17.6
Q ss_pred CCceeecCCCCccHHHHHHHHHHh
Q 036892 371 GSPVIRPADIETTALGAAFAAGLA 394 (447)
Q Consensus 371 ~~pV~~~~~~e~~alGaAllA~~~ 394 (447)
..||......+++.+|||.++...
T Consensus 304 ~~~i~~~~~~~a~l~GAa~l~~~~ 327 (332)
T 1sz2_A 304 DIPVYLIVHDNPGLLGSGAHLRQT 327 (332)
T ss_dssp TCCEEEECCSCHHHHHHHHHHHHH
T ss_pred CceEEEEECCchhHHHHHHHHHHh
Confidence 456766555678999999988654
No 74
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=45.17 E-value=8.9 Score=37.78 Aligned_cols=46 Identities=13% Similarity=0.113 Sum_probs=32.2
Q ss_pred ccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhccC--------CceeecC-CCCccHHHHHHHHH
Q 036892 329 KFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLLG--------SPVIRPA-DIETTALGAAFAAG 392 (447)
Q Consensus 329 ~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl~--------~pV~~~~-~~e~~alGaAllA~ 392 (447)
.+.|+++||.++=+-+. + ++.+-++ .+|..+. ...++++|++++|.
T Consensus 294 ~~~IvLtGG~s~~pG~~-~-----------------rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIA-D-----------------RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HTCEEEESGGGCSTTHH-H-----------------HHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HhCcEeeCCCCCCccHH-H-----------------HHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 46799999999988777 5 4444333 3344333 35579999999996
No 75
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=38.69 E-value=44 Score=31.33 Aligned_cols=32 Identities=22% Similarity=0.163 Sum_probs=23.3
Q ss_pred CcEEeccchhHHhhhcCCCCCCcEEEEecccce
Q 036892 187 IPISGCLGDHHAAMLGQACKKGEVKSTYGTGAF 219 (447)
Q Consensus 187 ~pV~~g~gD~~aa~lg~g~~~g~~~~s~GTs~~ 219 (447)
.||.. ..|..++++|......-+++++||+..
T Consensus 90 ~pv~v-~NDa~~aa~ge~g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 90 DRIEV-AGDMLGAARALCGDSEGIACILGTGSN 121 (291)
T ss_dssp SEEEE-ECHHHHHHHHHTTTSCEEEEEESSSEE
T ss_pred CcEEE-eCcHHHHHHhhcCCCCcEEEEecCChh
Confidence 36554 589999999853344557889999873
No 76
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=33.63 E-value=20 Score=33.98 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=23.7
Q ss_pred CCcEEeccchhHHhhhcCCCCCCcEEEEecccc
Q 036892 186 GIPISGCLGDHHAAMLGQACKKGEVKSTYGTGA 218 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~g~~~g~~~~s~GTs~ 218 (447)
+.||.. ..|..++++|.......+++++||+.
T Consensus 102 ~~pv~v-~NDa~aaa~ge~~~~~~v~v~~GTGi 133 (305)
T 1zc6_A 102 FARLSL-ATDGYTTLLGAHGGQPGIIVALGTGS 133 (305)
T ss_dssp CSEEEE-ECHHHHHHHHHTTTSSEEEEEESSSE
T ss_pred CceEEE-ECCHHHHHHhhcCCCCeEEEEecCCe
Confidence 567655 47999999985334556789999985
No 77
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=32.47 E-value=1.2e+02 Score=27.67 Aligned_cols=45 Identities=27% Similarity=0.309 Sum_probs=29.7
Q ss_pred ccEEEEecccccc-HHHHHhhhhhcccCccccccchhhhhhccCCceeecCC-CCccHHHHHHHHHH
Q 036892 329 KFLLRVDGAIDAN-LALLLSFEKYYYFPFLSFSYFECRSADLLGSPVIRPAD-IETTALGAAFAAGL 393 (447)
Q Consensus 329 ~~~i~~~GG~s~s-~~~~~q~~~~~~~~~~~~~~~~~~~Advl~~pV~~~~~-~e~~alGaAllA~~ 393 (447)
++.|++.||.++. +.+.+. +. ...+|..... .+++++|||.++..
T Consensus 215 P~~IvlgG~i~~~~~~~~~~-----------------~~---~~~~i~~s~l~~~a~~~GAa~l~~~ 261 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPN-----------------LR---LRTPIVPAVLRNEAGIVGAAIEIAL 261 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGG-----------------CC---CSSCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeChhhcccHHHHHh-----------------hc---cCceEEECCcCCcHHHHHHHHHHHh
Confidence 5788888888764 455412 22 2456666653 56799999998754
No 78
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=32.34 E-value=67 Score=30.43 Aligned_cols=41 Identities=29% Similarity=0.191 Sum_probs=26.3
Q ss_pred CCcEEeccchhHHhhhc-----CCC-CCCcEEEEecccceeccccCcc
Q 036892 186 GIPISGCLGDHHAAMLG-----QAC-KKGEVKSTYGTGAFILLNTGEE 227 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg-----~g~-~~g~~~~s~GTs~~i~~~~~~~ 227 (447)
++||.. ..|..|+++| .+. ..+-+++++||+--..++.+.+
T Consensus 98 ~~pV~v-~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~gii~~G~ 144 (302)
T 3epq_A 98 XIPVGF-STDVNAAALGEFLFGEAXGLDSCLYITIGTGIGAGAIVEGR 144 (302)
T ss_dssp CSCEEE-EEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETTE
T ss_pred CCCEEE-echhHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECCE
Confidence 567654 4798888876 333 4667889999984443344333
No 79
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=29.38 E-value=56 Score=30.73 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHHHHHhhhhhcccCccccccchhhhhhcc
Q 036892 291 GSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLALLLSFEKYYYFPFLSFSYFECRSADLL 370 (447)
Q Consensus 291 g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~~~~q~~~~~~~~~~~~~~~~~~~Advl 370 (447)
+|...|-..++.|.+..+..+++.++++.+.+ -.|+++||.+ + ++++.+
T Consensus 183 nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~-------~~vi~TGG~a-------~-----------------~l~~~~ 231 (268)
T 2h3g_X 183 NTVSAMQSGILYGYVGQVEGIVKRMKEEAKQE-------PKVIATGGLA-------K-----------------LISEES 231 (268)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSC-------CEEEEESTTH-------H-----------------HHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CEEEEECCCH-------H-----------------HHHhhC
Confidence 48999999999999999999999998776644 5799999954 3 344444
Q ss_pred CCceeecCCCCccHHHHHHHHHH
Q 036892 371 GSPVIRPADIETTALGAAFAAGL 393 (447)
Q Consensus 371 ~~pV~~~~~~e~~alGaAllA~~ 393 (447)
..+..+ +++-+..|-.++.-.
T Consensus 232 ~~~~~~--~~~LvL~GL~~i~~~ 252 (268)
T 2h3g_X 232 NVIDVV--DPFLTLKGLYMLYER 252 (268)
T ss_dssp SSCSEE--CTTHHHHHHHHHHHH
T ss_pred CCCCEE--CcchHHHHHHHHHHh
Confidence 444433 235677787766643
No 80
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=29.23 E-value=64 Score=35.97 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=24.3
Q ss_pred EEeccchhHHhhhcCCC-C-CCcEEEEecccceec
Q 036892 189 ISGCLGDHHAAMLGQAC-K-KGEVKSTYGTGAFIL 221 (447)
Q Consensus 189 V~~g~gD~~aa~lg~g~-~-~g~~~~s~GTs~~i~ 221 (447)
|++-.-|+.+++++..- . ...+.+++||+.-.+
T Consensus 651 ~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~ 685 (917)
T 1cza_N 651 VVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNAC 685 (917)
T ss_dssp EEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEE
T ss_pred EEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEE
Confidence 66667899999998765 3 444778999985443
No 81
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=28.20 E-value=91 Score=31.95 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=26.8
Q ss_pred CCcEEeccchhHHhhhcCCC-CC-CcEEEEecccceec
Q 036892 186 GIPISGCLGDHHAAMLGQAC-KK-GEVKSTYGTGAFIL 221 (447)
Q Consensus 186 g~pV~~g~gD~~aa~lg~g~-~~-g~~~~s~GTs~~i~ 221 (447)
.+.|++=.-|+.+.+++..- .+ -.+.+++||+.-.+
T Consensus 201 ~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~ 238 (470)
T 3f9m_A 201 EMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNAC 238 (470)
T ss_dssp CCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEE
T ss_pred CCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceE
Confidence 57788888999999987655 33 34668999996543
No 82
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=28.04 E-value=75 Score=29.84 Aligned_cols=42 Identities=12% Similarity=0.236 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhh--hcccccccCCccEEEEecccc
Q 036892 291 GSQLHIARAVLESMCFQVKDVLDSLQKD--AVEKGVIKDAKFLLRVDGAID 339 (447)
Q Consensus 291 g~~~~l~rAvlEgia~~~~~~l~~l~~~--~g~~~~~~~~~~~i~~~GG~s 339 (447)
+|...|-..++.|.+..+..+++.++++ .+.+ -.|+++||.+
T Consensus 185 nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~-------~~vi~TGG~a 228 (266)
T 3djc_A 185 STIESIQSGVYYGVLGACKELIQRIHHEAFNGDQ-------ILILATGGFA 228 (266)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-------EEEEEESTTG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-------CEEEEECCCh
Confidence 4899999999999999999999999876 5544 5799999965
No 83
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=22.82 E-value=1.2e+02 Score=29.58 Aligned_cols=75 Identities=9% Similarity=-0.012 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEeccccccHH--HHHhhhhhcccCccccccchhhhhhccCC
Q 036892 295 HIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAIDANLA--LLLSFEKYYYFPFLSFSYFECRSADLLGS 372 (447)
Q Consensus 295 ~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s~s~~--~~~q~~~~~~~~~~~~~~~~~~~Advl~~ 372 (447)
++...+-+.+.-.+..+++.+++... ++ +.++.|+++||++.=.- +. + .+.+.+
T Consensus 261 di~~~i~~a~~~~~~~I~~~i~~~l~-~~---~~~~~Ivl~GGGa~l~~~~l~-~-----------------~i~~~~-- 316 (355)
T 3js6_A 261 DFKDEFYKEQDSLIEEVMSNFEITVG-NI---NSIDRIIVTGGGANIHFDSLS-H-----------------YYSDVF-- 316 (355)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTC-CT---TSCSEEEEESTTHHHHHHHHH-H-----------------HSSSCE--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhh-ch---hhccEEEEECcchhcchhhHH-H-----------------HHHHHC--
Confidence 44444444444444555555554221 11 22689999999987332 33 4 444444
Q ss_pred ceeecCCCCccHHHHHHHHHHh
Q 036892 373 PVIRPADIETTALGAAFAAGLA 394 (447)
Q Consensus 373 pV~~~~~~e~~alGaAllA~~~ 394 (447)
|.. .+...+.|+|...++..-
T Consensus 317 ~~~-~~p~~anA~G~~~~~~~~ 337 (355)
T 3js6_A 317 EKA-DDSQFSNVRGYEKLGELL 337 (355)
T ss_dssp ECC-SSGGGHHHHHHHHHHHHH
T ss_pred CCC-CCcHHHHHHHHHHHHHHH
Confidence 333 334557999999887643
No 84
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=21.17 E-value=20 Score=33.84 Aligned_cols=37 Identities=27% Similarity=0.251 Sum_probs=25.0
Q ss_pred CcEEeccchhHHhhhcCCCCCCcEEEEecccce-ecccc
Q 036892 187 IPISGCLGDHHAAMLGQACKKGEVKSTYGTGAF-ILLNT 224 (447)
Q Consensus 187 ~pV~~g~gD~~aa~lg~g~~~g~~~~s~GTs~~-i~~~~ 224 (447)
.||.. ..|..++++|......-+++++||+.. ..++.
T Consensus 88 ~pv~v-~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~ 125 (291)
T 1zxo_A 88 GNIKA-NSDMLAAAHGLCGQKAGIACILGTGSNSCFYNG 125 (291)
T ss_dssp SCCEE-ECSHHHHHHHTTTTSCBEEEEESSSEEEEEECS
T ss_pred ceEEE-ECcHHHHHHhhcCCCCcEEEEeCCChheEEECC
Confidence 36544 489999999864334557789999873 44443
No 85
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=20.97 E-value=1.1e+02 Score=28.37 Aligned_cols=41 Identities=7% Similarity=0.238 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccEEEEecccc
Q 036892 291 GSQLHIARAVLESMCFQVKDVLDSLQKDAVEKGVIKDAKFLLRVDGAID 339 (447)
Q Consensus 291 g~~~~l~rAvlEgia~~~~~~l~~l~~~~g~~~~~~~~~~~i~~~GG~s 339 (447)
+|...|-..++.|.+..+..+++.++++. + .-.|+++||.+
T Consensus 181 nT~~ai~sGi~~g~~g~i~~~i~~~~~~~--~------~~~vi~TGG~a 221 (249)
T 3bex_A 181 DTEENIRLGVVNGSVYALEGIIGRIKEVY--G------DLPVVLTGGQS 221 (249)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--C------CCCEEEESTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHc--C------CCEEEEECCCh
Confidence 48999999999999999999999998765 3 35799999965
Done!