BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036900
(247 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 20/245 (8%)
Query: 7 HIVMLPFMAHGHLIPFLALARQIHQSTGFKITIANTPLNIQYLQNTISCNNPNSSEKFNI 66
H+VM+P+ GH+ P LA+ +H GF IT NT N + L + P + + F
Sbjct: 10 HVVMIPYPVQGHINPLFKLAKLLHLR-GFHITFVNTEYNHKRL---LKSRGPKAFDGF-- 63
Query: 67 NLVELPFCSSDHGLPPNTENTENLSFDLIINFFASSQSLKTPLYNLLMGIKEKEGKPPI- 125
+ F S GL P E ++S D+ + ++ P LL + PP+
Sbjct: 64 --TDFNFESIPDGLTP-MEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVT 120
Query: 126 CIITDIFFGWAVDVAKSAGTTNVTFSTGGGYGTLAYISL----------WLNLPHRKTNS 175
C+++D + + A+ NV + + L + + + +
Sbjct: 121 CLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGC 180
Query: 176 DEFTLPGFPERCHFHITQLHKYLRMADGTDDWSKFMQPQISQSLKSYGMLCNTAEEIEPG 235
E + P +F + + ++R + D +F + K +L NT E+E
Sbjct: 181 LETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240
Query: 236 ALQWL 240
+ L
Sbjct: 241 VINAL 245
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 31/248 (12%)
Query: 3 SENEHIVMLPFMAHGHLIPFLALARQIHQSTGFKITIANTPLNIQYLQNTISCNNPNSSE 62
S+ H+ ++P GHLIP + A+++ G +T I+ P S
Sbjct: 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTF------------VIAGEGPPSKA 51
Query: 63 KFNINLVELPFCSSDHGLPP----NTENTENLSFDLIINFFASSQSLKTPLYNLLMGIKE 118
+ + L LP S LPP + ++ + + + S+ L+ + + G
Sbjct: 52 QRTV-LDSLPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEG--- 107
Query: 119 KEGKPPICIITDIFFGWAVDVAKSAGTTNVTFSTGGGYGTLA-YISLWLNLPH-RKTNSD 176
G+ P ++ D+F A DVA F Y T A +S +L+LP +T S
Sbjct: 108 --GRLPTALVVDLFGTDAFDVAVEFHVPPYIF-----YPTTANVLSFFLHLPKLDETVSC 160
Query: 177 EFTLPGFPERCHFHITQLHK-YLRMA-DGTDDWSKFMQPQISQSLKSYGMLCNTAEEIEP 234
EF P + K +L A D DD K++ + ++ G+L NT E+EP
Sbjct: 161 EFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEP 220
Query: 235 GALQWLRN 242
A++ L+
Sbjct: 221 NAIKALQE 228
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 23/186 (12%)
Query: 7 HIVMLPFMAHGHLIPFLALARQIHQSTGFKITIANTPLNIQYLQNTISCNNPNSSEKFNI 66
H+ +L F H P L+L ++I A + + + N + N
Sbjct: 15 HVAVLAFPFGTHAAPLLSLVKKI----------ATEAPKVTFSFFCTTTTNDTLFSRSNE 64
Query: 67 NLVELPFCSSDHGLPPNTENTENLSFDLIINFFASSQSLKTPLYNLLMGIKEKEGKPPIC 126
L + + + GLP ++ N + + A ++ K +++ + GK C
Sbjct: 65 FLPNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFK----HVIDEAVAETGKNITC 120
Query: 127 IITDIFFGWAVDVAKSAGTTNVTFSTGGGYGTLAYISLWLNLPHRKTNSDEF-------T 179
++TD FF + D+A+ V T G + L ++ + +L KT S E
Sbjct: 121 LVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHV--YTDLIREKTGSKEVHDVKSIDV 178
Query: 180 LPGFPE 185
LPGFPE
Sbjct: 179 LPGFPE 184
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 111 NLLMGIKEKEGKPPICIITDIFFGWAVDVAKSAGTTNVTFSTGG 154
++M + E G+P C++ D F +A D+A G + F T G
Sbjct: 101 GMVMAVAET-GRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAG 143
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases:
A Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases:
A Blueprint For Antibiotic Engineering
Length = 430
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 7 HIVMLPFMAHGHLIPFLALARQIHQSTGFKITIANTPL 44
HI M AHGH+ P L + R++ + G ++T A P+
Sbjct: 9 HIAMFSIAAHGHVNPSLEVIREL-VARGHRVTYAIPPV 45
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 157
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 158 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEXXS 189
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 93 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 150
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 151 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 182
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 156
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 157 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 188
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 155
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 156 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 187
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 153
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 154 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 185
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 4 ENEHIVMLPFMAHGHLIPFLALARQIHQSTGFKITIANTPL 44
HI+ HGH+ P L L ++ + G +IT TPL
Sbjct: 3 RQRHILFANVQGHGHVYPSLGLVSELARR-GHRITYVTTPL 42
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 158
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 159 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 190
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 157
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 158 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 189
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 158
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 159 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 190
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 119 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 176
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 177 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 208
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTPLNI---QYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 120 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD 177
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLS 91
++ N EKF + + +D GL + + E S
Sbjct: 178 LAARNCMLDEKFTVKV-------ADFGLARDMYDKEYYS 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 158
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 159 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 193
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 217
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 218 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 252
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 159
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 160 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 194
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 156
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 157 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 191
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 158
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 159 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 193
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 106 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 163
Query: 53 ISCNNPNSSEKFNINLVELPFCSSDHGLPPNTENTENLSFDLIIN 97
++ N EKF + + +D GL + + E FD + N
Sbjct: 164 LAARNCMLDEKFTVKV-------ADFGLARDMYDKE---FDSVHN 198
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 1 MGSENEHIVMLPFMAHGHLIPFLALARQIHQST-----GFKITIANTP---LNIQYLQNT 52
+ SE +V+LP+M HG L F + + H T GF + +A + +++
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 159
Query: 53 ISCNNPNSSEKFNINLVEL 71
++ N EKF + + +
Sbjct: 160 LAARNCMLDEKFTVKVADF 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,900,861
Number of Sequences: 62578
Number of extensions: 319798
Number of successful extensions: 633
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 626
Number of HSP's gapped (non-prelim): 23
length of query: 247
length of database: 14,973,337
effective HSP length: 96
effective length of query: 151
effective length of database: 8,965,849
effective search space: 1353843199
effective search space used: 1353843199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)