Your job contains 1 sequence.
>036907
MSEKMKRKHYTDLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTT
PTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDE
GRDPKALPKIRGISFVNVVSVNTIKAPVRAGIIVLAPSVKWQSQFVSGFNSQVFPLPCPQ
LQNKTRFSWVTSYPFNSCLQNFPNFLRET
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036907
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 468 1.9e-44 1
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 333 3.8e-30 1
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 321 7.1e-29 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 313 5.0e-28 1
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 269 1.6e-26 2
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 252 1.7e-24 2
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 251 2.7e-24 2
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 264 3.5e-22 1
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 239 8.5e-22 2
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 233 7.6e-19 1
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 190 3.7e-18 2
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 222 1.0e-17 1
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 207 4.2e-16 1
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 111 0.00068 1
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 95/155 (61%), Positives = 113/155 (72%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYIESG+DLVAVK GW+ YG+A+ARPSSNI +RR+SGTT T SGVGIGSE
Sbjct: 264 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 323
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGIFN R K DKGRGG I NIT + +E+VK+PIR GSN H
Sbjct: 324 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 383
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
D+ DPKALP+++GI NVVS+N+ KAP+ G+
Sbjct: 384 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGV 418
Score = 256 (95.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 56/120 (46%), Positives = 73/120 (60%)
Query: 80 RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVV 139
R K DKGRGG I NIT + +E+VK+PIR GSN H D+ DPKALP+++GI NVV
Sbjct: 346 RIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVV 405
Query: 140 SVNTIKAPVRAGI---------------IVLAPSVKWQSQFVSGFNSQVFPLPCPQLQNK 184
S+N+ KAP+ G+ + L + KW+ + VSG+ S VFPL CPQL K
Sbjct: 406 SLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWKCKDVSGYASDVFPLSCPQLLQK 465
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 71/141 (50%), Positives = 90/141 (63%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D STNVCIEDCYI +G+DLV++K GW+ YGI+ ARPSS I + R++G T + SG+ IGSE
Sbjct: 235 DSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSE 294
Query: 72 MSGGI----------FNART----KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ FN+ T K GRGG + N+ I +K++ VK IR H
Sbjct: 295 MSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEH 354
Query: 118 PDEGRDPKALPKIRGISFVNV 138
PDE DPKALP I I+F NV
Sbjct: 355 PDEKYDPKALPAIEKITFENV 375
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 70/149 (46%), Positives = 92/149 (61%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED YI +G+DLVA+K GW+ YGIA RPSSNIT+RR++G++P ++G+ IGSE
Sbjct: 233 DSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP-FAGIAIGSE 291
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG I+NI I + ++ K I+I + H
Sbjct: 292 TSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIAGDTGDH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKA 146
PDE +P ALP ++GI NV VN A
Sbjct: 352 PDENYNPNALPVVKGIHIKNVWGVNVRNA 380
Score = 147 (56.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/158 (32%), Positives = 75/158 (47%)
Query: 41 GIAMARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIK 100
GIA+ +S ++ + T S +G+G N +T I GRGG I+NI I +
Sbjct: 285 GIAIGSETSG-GIKNIIAEHITLSNMGVG-------VNIKTNI--GRGGYIKNIKISDVY 334
Query: 101 MERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNT--------IKAPVRAGI 152
++ K I+I + HPDE +P ALP ++GI NV VN +K GI
Sbjct: 335 VDTAKYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGI 394
Query: 153 ----IVLAPSVK----WQSQFVSGFNSQVFPLPCPQLQ 182
I L S+ W+ VSG + +V P PC +L+
Sbjct: 395 CLSEINLHGSLNSYKTWKCSDVSGTSLKVSPWPCSELR 432
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 68/155 (43%), Positives = 98/155 (63%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S+NVCIED YI +G+DLVAVK GW+ YGIA RPS +IT+RR++G++P ++G+ IGSE
Sbjct: 238 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP-FAGIAIGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
SGGI N K + GRGG+I+ ITI + +E+V+ I+I + H
Sbjct: 297 TSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKISGDTGDH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
PD+ + ALP +RGI+ NV + +A + G+
Sbjct: 357 PDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGL 391
Score = 143 (55.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 49/162 (30%), Positives = 77/162 (47%)
Query: 41 GIAM-ARPSSNITMRRVSGTTPTYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYI 99
GIA+ + S I V T SG+GI + +T I GRGG+I+ ITI +
Sbjct: 290 GIAIGSETSGGIQNVTVENITLYNSGIGI---------HIKTNI--GRGGSIQGITISGV 338
Query: 100 KMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI------- 152
+E+V+ I+I + HPD+ + ALP +RGI+ NV + +A + G+
Sbjct: 339 YLEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTN 398
Query: 153 -----IVLAPSVK---WQSQFVSGFNSQVFPLPCPQLQNKTR 186
+ L + + W+ V G +V P PCP+L T+
Sbjct: 399 LCFSNVTLTGTKRSPIWKCSDVVGAADKVNPTPCPELSATTQ 440
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 269 (99.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 61/155 (39%), Positives = 87/155 (56%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ +++RR++ +P +GV +GSE
Sbjct: 238 DSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSE 297
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG +++I R I M+ +K + SH
Sbjct: 298 MSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSH 357
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
PDEG DPKALP+I I++ ++ + N + GI
Sbjct: 358 PDEGFDPKALPEITNINYRDMTAENVTMSASLDGI 392
Score = 54 (24.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 148 VRAGIIVLAPSVKWQSQFVSGFNSQVFPLPCPQLQNK 184
V + A ++W V+G S+V P PC L K
Sbjct: 405 VTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEK 441
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 252 (93.8 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 59/155 (38%), Positives = 87/155 (56%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI P+ + +RR++ +P + + +GSE
Sbjct: 260 DSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAVIALGSE 319
Query: 72 MSGGI----------FNA----RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N+ R K GRGG ++++ +R + M +K + SH
Sbjct: 320 MSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSH 379
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
PD+ DPKALP I+ I++ ++V+ N AGI
Sbjct: 380 PDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGI 414
Score = 55 (24.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 159 VKWQSQFVSGFNSQVFPLPCPQLQNK 184
V W VSG+ S V P PC L K
Sbjct: 438 VLWNCTDVSGYTSGVTPQPCQLLPEK 463
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 251 (93.4 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 55/152 (36%), Positives = 85/152 (55%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCY+ SG+D +AVK GW+ +GI + P+ +++RR++ +P +G+ +GSE
Sbjct: 249 DSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSE 308
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRGG +++I R M+ +K + N H
Sbjct: 309 MSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQH 368
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
P G DPKA+P I I++ ++ + N + P R
Sbjct: 369 PASGFDPKAMPVITNINYRDMTADN-VTQPAR 399
Score = 53 (23.7 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W +SG +S+V P PC L K
Sbjct: 429 WNCTSISGVSSKVTPKPCSLLPEK 452
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 264 (98.0 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 60/152 (39%), Positives = 84/152 (55%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IEDCYI +G+D +A+K GW+ +GIA RPS+NI +R + + +GV IGSE
Sbjct: 281 DSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSE 340
Query: 72 MSGGIFNA--------------RTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI N R K GRGG I NIT + + ++ V++ I I N H
Sbjct: 341 MSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIKTDYNEH 400
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
D+ D KA P + G SF + ++ PVR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHGQG-VRVPVR 431
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 239 (89.2 bits), Expect = 8.5e-22, Sum P(2) = 8.5e-22
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D TN IEDCYI SG+D +AVK GW+ YGI+ P+ ++ +RR++ +P + + +GSE
Sbjct: 237 DSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISPYSAAIALGSE 296
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGGI + R K GRG ++NI ++ + + +K + +H
Sbjct: 297 MSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAH 356
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVRAGI 152
D DP ALP+I GI++ ++V+ N A GI
Sbjct: 357 ADSHYDPHALPEITGINYRDIVAENVSMAGRLEGI 391
Score = 42 (19.8 bits), Expect = 8.5e-22, Sum P(2) = 8.5e-22
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 161 WQSQFVSGFNSQVFPLPCPQLQNK 184
W V G S V P PC L +
Sbjct: 417 WMCSDVEGVTSGVDPKPCDLLDGQ 440
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 233 (87.1 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 51/152 (33%), Positives = 81/152 (53%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D ++ IE+ YI G+D +A+K GW+ YG +PS NI +R + + +G+ IGSE
Sbjct: 259 DSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSE 318
Query: 72 MSGGIFN--------------ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N R K GRGG + +IT R + ++ +++ I I N H
Sbjct: 319 MSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVIKTDYNEH 378
Query: 118 PDEGRDPKALPKIRGISFVNVVSVNTIKAPVR 149
PD G +P+A P + I++ + ++ PVR
Sbjct: 379 PDGGFNPQAFPILENINYTGIYGQG-VRVPVR 409
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 190 (71.9 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 50/146 (34%), Positives = 72/146 (49%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCI++ I G D +++K G + YG++ ARP++N+ +R V + S + GSE
Sbjct: 235 DSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSSISFGSE 294
Query: 72 MSGGIFNART--------------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGS-NS 116
MSGGI + + GRGG I+ I I I M V + GS +
Sbjct: 295 MSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAF-LANGSFGT 353
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVN 142
HPD G D A P + I ++V N
Sbjct: 354 HPDSGFDENAYPLVSHIRLHDIVGEN 379
Score = 58 (25.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 156 APSVKWQSQFVSGFNSQVFPLPCPQLQN 183
+P+ WQ +V G + V P PC +L++
Sbjct: 411 SPADSWQCSYVDGSSEFVVPEPCLELKS 438
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 54/145 (37%), Positives = 76/145 (52%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S NVCIED I G+D V++K GW+ YGI RP++ + +R + +PT +G+ GSE
Sbjct: 232 DSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFGSE 291
Query: 72 MSGGI-------FNARTKI-------DKGRGGNIENITIRYIKMERVKIPIRIGRGSNSH 117
MSGG+ N + + +GRGG I NITI + + V I + SH
Sbjct: 292 MSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTGSH 351
Query: 118 PDEGRDPKALPKIRGISFVNVVSVN 142
PD+ D ALP + I N V+
Sbjct: 352 PDDKFDRDALPVVTHIVMRNFTGVD 376
Score = 112 (44.5 bits), Expect = 0.00052, P = 0.00052
Identities = 45/136 (33%), Positives = 57/136 (41%)
Query: 62 TYSGVGIGSEMSGGIFNARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEG 121
T + I S + G F RT +GRGG I NITI + + V I + SHPD+
Sbjct: 300 TVERLNIHSSLIGVAF--RTT--RGRGGYIRNITISDVDLTSVDTAIVANGHTGSHPDDK 355
Query: 122 RDPKALPKIRGISFVNVVSVNTIKAPVRAGI-------IVLAP-------SVKWQSQFVS 167
D ALP + I N V+ A GI I LA W VS
Sbjct: 356 FDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQTRSEESWICSNVS 415
Query: 168 GFNSQVFPLPCPQLQN 183
GF+ V P PC +L +
Sbjct: 416 GFSDDVSPEPCQELMS 431
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 207 (77.9 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 56/146 (38%), Positives = 75/146 (51%)
Query: 12 DLSTNVCIEDCYIESGNDLVAVKKGWNHYGIAMARPSSNITMRRVSGTTPTYSGVGIGSE 71
D S VCI++ I G D +++K GW+ YGIA +RP+ N+ +R V + S + GSE
Sbjct: 235 DSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASGSSISFGSE 294
Query: 72 MSGGIF-----NART---------KIDKGRGGNIENITIRYIKMERVKIPIRIGRGS-NS 116
MSGGI NA + KGRGG I+ I I I M R+ I + GS S
Sbjct: 295 MSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAI-VANGSFGS 353
Query: 117 HPDEGRDPKALPKIRGISFVNVVSVN 142
HPD+ D ALP + I N+ N
Sbjct: 354 HPDDKYDVNALPLVSHIRLSNISGEN 379
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/114 (35%), Positives = 52/114 (45%)
Query: 85 KGRGGNIENITIRYIKMERVKIPIRIGRGSNSHPDEGRDPKALPKIRGISFVNVVSVNT- 143
KGRGG I+ I I I M R+ I SHPD+ D ALP + I N+ N
Sbjct: 322 KGRGGYIKEIDISNIDMLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIG 381
Query: 144 -------IK-AP---VRAGIIVLA----PSVKWQSQFVSGFNSQVFPLPCPQLQ 182
IK +P V + L+ SV WQ +V G + V P PCP+L+
Sbjct: 382 IAGKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYGSSESVIPEPCPELK 435
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 111 (44.1 bits), Expect = 0.00068, P = 0.00068
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 14 STNVCIEDCYIESGNDLVAVKKGWNHYGIAM--ARPSSNITMRRVS--GTTPTYSGVGIG 69
S+NV I+DC I +G+D +A+ G ++ I+ P I++ + G T T V +
Sbjct: 196 SSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQ 255
Query: 70 SEMSGGIFN-ARTKIDKGRGGNIENITIRYIKMERVKIPIRIGRGSNS-HPDEGRDPKAL 127
+ G N AR K +G G IT I ++ V+ PI I + N D +D K+
Sbjct: 256 NCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSS 315
Query: 128 P-KIRGISFVNVVSVN 142
++ + F N + +
Sbjct: 316 AVEVSKVVFSNFIGTS 331
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 209 0.00079 112 3 11 22 0.37 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 601 (64 KB)
Total size of DFA: 179 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.38u 0.07s 17.45t Elapsed: 00:00:03
Total cpu time: 17.38u 0.07s 17.45t Elapsed: 00:00:03
Start: Fri May 10 11:01:23 2013 End: Fri May 10 11:01:26 2013